Your job contains 1 sequence.
>048801
MDYWKLSSSSGAPSLGKAPLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFL
SSGPCQRTLGLLWNELLEHQLLPRRYHAWFSRSGVNSGNDNDDGISFPLSYNKLVERYPH
IEWDHLVKLLRQLLLYKASPFHGRIGGIAPNAADVPTLLGSGSFSLLECDRSMKYKQVKP
LPAYLRWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLR
GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV
ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR
YSQYSPRIYLPKPPDAITGKSNVPSNNGPSSSNGLQSHQILCCAYNANGTVFVTGSSDTF
ARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDAFKEENVPKFK
NSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVPPPPLPPQPPRGGPRQR
LLPTPRGVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP
RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTG
QGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEEPYQ
SMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDPVYWEP
ENEVISDDNDSEYNIAEECASEAEQGRDSEVEHSRKDGRRRSTRRKHRAEVELKTSSGRR
VRKRNLDERDGSASGSNRTKKSKNSQKALKKKSSKAKLLRPQRVAARNARSMFSRITGTS
TGEDDSDSEYNSSNSDTVLQDSHVQSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLEL
LESQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGTTERKIDLS
LKEPGSSSAGSGIDVGLSQKHNRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTS
KRSSSSGVLLPPDANFDVHNDSIGDVNRCVKLENGHGKFSSNSETSCYGCVRSCSDKEKF
GSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKE
NPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESSLCMEGNLMSEVPEE
AEGYGRSSSDQLLNSNLKFKVRDGSKSSYKTRTDIEAFDGGMEDGINHEASGIDSPEAAS
GSIRKTRSMKMKIISREPIAANCNFKSKNGHDLVGTSKTVGNSSMEAHDEFFPEEWIPTS
TVKSRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSWLMLSEHEEGYRYIPQLGDEVIYS
RQGHQEFIESTGSQEVGPWWSINGYISAVETCKVVNLVYATFPGSGDSCCKITLKFVDPS
SSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRDKCQIWWRNANGEGGTWWKGR
ITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHDPNVMWEHPEIDSESRDKLLSSF
NKLEQSVSRKQDYYGIQRLNEAAQKLDYLNRFPVPLYPEVIRLRLVNNYYRSLEAAKDDI
NVMLSNAESYFIKNAALSAKVERLRDWFNRTLNKL
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048801
(1715 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2061997 - symbol:AT2G47410 "AT2G47410" species... 3125 0. 2
TAIR|locus:2158044 - symbol:AT5G49430 "AT5G49430" species... 2979 0. 2
UNIPROTKB|F1MTQ0 - symbol:BRWD1 "Uncharacterized protein"... 349 9.7e-76 7
MGI|MGI:1890651 - symbol:Brwd1 "bromodomain and WD repeat... 359 7.3e-75 6
UNIPROTKB|Q9NSI6 - symbol:BRWD1 "Bromodomain and WD repea... 354 2.4e-74 7
UNIPROTKB|Q8WWQ0 - symbol:PHIP "PH-interacting protein" s... 345 2.3e-73 7
MGI|MGI:1932404 - symbol:Phip "pleckstrin homology domain... 346 9.4e-73 7
UNIPROTKB|E1BSG1 - symbol:BRWD1 "Uncharacterized protein"... 319 1.6e-72 6
RGD|1309030 - symbol:Brwd1 "bromodomain and WD repeat dom... 349 1.7e-72 7
ZFIN|ZDB-GENE-050208-261 - symbol:phip "pleckstrin homolo... 354 5.2e-72 6
UNIPROTKB|F1NXP9 - symbol:PHIP "Uncharacterized protein" ... 349 5.0e-69 4
FB|FBgn0011785 - symbol:BRWD3 "BRWD3" species:7227 "Droso... 327 1.8e-68 7
MGI|MGI:3029414 - symbol:Brwd3 "bromodomain and WD repeat... 308 2.3e-68 5
UNIPROTKB|F1MPF7 - symbol:PHIP "Uncharacterized protein" ... 328 5.7e-68 6
RGD|1559445 - symbol:Brwd3 "bromodomain and WD repeat dom... 308 6.0e-68 5
UNIPROTKB|Q6RI45 - symbol:BRWD3 "Bromodomain and WD repea... 307 1.3e-67 5
UNIPROTKB|F1N8L6 - symbol:BRWD3 "Uncharacterized protein"... 310 1.6e-66 4
UNIPROTKB|F1N1C9 - symbol:BRWD3 "Uncharacterized protein"... 308 4.6e-66 4
ZFIN|ZDB-GENE-041111-120 - symbol:brwd1 "bromodomain and ... 326 6.4e-65 5
DICTYBASE|DDB_G0285837 - symbol:DDB_G0285837 "BRWD group ... 314 1.3e-55 7
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 192 1.3e-18 3
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 198 3.7e-18 2
TAIR|locus:2148965 - symbol:TOZ "AT5G16750" species:3702 ... 194 7.0e-18 4
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 244 4.0e-16 1
DICTYBASE|DDB_G0287635 - symbol:prpf4 "pre-mRNA processin... 236 1.1e-15 2
SGD|S000000402 - symbol:TAF5 "Subunit (90 kDa) of TFIID a... 236 1.3e-15 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 190 3.1e-15 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 190 3.1e-15 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 199 3.4e-15 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 197 4.1e-15 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 178 5.3e-15 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 197 6.3e-15 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 182 6.3e-15 3
POMBASE|SPAC227.12 - symbol:SPAC227.12 "U4/U6 x U5 tri-sn... 189 7.2e-15 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 201 9.1e-15 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 171 9.3e-15 3
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 193 1.3e-14 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 193 1.3e-14 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 193 1.3e-14 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 193 1.3e-14 2
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 179 1.6e-14 3
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 165 2.1e-14 2
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 203 2.2e-14 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 177 2.6e-14 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 187 3.1e-14 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 172 3.8e-14 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 191 3.9e-14 3
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 165 4.2e-14 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 172 4.6e-14 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 166 4.9e-14 2
POMBASE|SPAC18B11.10 - symbol:tup11 "transcriptional core... 216 5.4e-14 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 177 5.8e-14 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 170 6.1e-14 2
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 182 6.2e-14 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 220 7.0e-14 1
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 187 7.7e-14 3
UNIPROTKB|F1N9W1 - symbol:FBXW7 "Uncharacterized protein"... 180 8.4e-14 2
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 184 8.4e-14 2
RGD|2321145 - symbol:Fbxw7 "F-box and WD repeat domain co... 181 8.4e-14 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 170 9.7e-14 2
UNIPROTKB|F1MNN4 - symbol:FBXW7 "Uncharacterized protein"... 180 1.0e-13 2
MGI|MGI:1354695 - symbol:Fbxw7 "F-box and WD-40 domain pr... 180 1.1e-13 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 168 1.3e-13 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 168 1.3e-13 2
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 217 1.3e-13 1
ASPGD|ASPL0000055088 - symbol:AN10058 species:162425 "Eme... 173 1.4e-13 3
UNIPROTKB|Q969H0 - symbol:FBXW7 "F-box/WD repeat-containi... 180 1.5e-13 2
SGD|S000001308 - symbol:MET30 "F-box protein containing f... 197 1.5e-13 2
UNIPROTKB|E2QUZ3 - symbol:FBXW7 "Uncharacterized protein"... 180 1.5e-13 2
UNIPROTKB|G4MRA1 - symbol:MGG_04693 "WD repeat-containing... 187 1.6e-13 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 168 1.6e-13 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 202 1.8e-13 4
ZFIN|ZDB-GENE-090313-79 - symbol:fbxw7 "F-box and WD repe... 179 1.9e-13 2
UNIPROTKB|F1SQT5 - symbol:APAF1 "Uncharacterized protein"... 179 2.0e-13 3
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 163 2.0e-13 2
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 177 2.3e-13 3
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 177 2.3e-13 3
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 177 2.3e-13 3
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 177 2.3e-13 3
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 165 2.4e-13 2
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 211 2.5e-13 2
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 172 2.7e-13 2
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 213 2.8e-13 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 177 2.9e-13 3
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 189 3.2e-13 2
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 186 3.4e-13 2
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 206 5.9e-13 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 156 5.9e-13 2
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 166 5.9e-13 2
ASPGD|ASPL0000041012 - symbol:AN9085 species:162425 "Emer... 172 6.8e-13 2
TAIR|locus:2008159 - symbol:RACK1B_AT "AT1G48630" species... 158 7.1e-13 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 173 7.3e-13 2
TAIR|locus:2176897 - symbol:AT5G52820 "AT5G52820" species... 172 7.4e-13 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 208 8.1e-13 1
UNIPROTKB|F1NUK8 - symbol:SNRNP40 "Uncharacterized protei... 174 9.0e-13 3
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 174 1.0e-12 2
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 207 1.0e-12 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 207 1.1e-12 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 184 1.1e-12 2
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 206 1.3e-12 1
WARNING: Descriptions of 783 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2061997 [details] [associations]
symbol:AT2G47410 "AT2G47410" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0009630 "gravitropism"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:CP002685 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0080008
KO:K11797 IPI:IPI00537086 RefSeq:NP_850474.3 UniGene:At.36365
ProteinModelPortal:F4IL43 PRIDE:F4IL43 EnsemblPlants:AT2G47410.1
GeneID:819354 KEGG:ath:AT2G47410 OMA:CDSSMIP Uniprot:F4IL43
Length = 1520
Score = 3125 (1105.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 629/1038 (60%), Positives = 743/1038 (71%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGPCQRTXXXXXXXXXX 78
P + VQ L+ D ++ + + D+DLREVYFLI+HFLS GPC+RT
Sbjct: 13 PSNLAKLVQGNVPLQPHDSHSS-LTDLDMDLREVYFLILHFLSIGPCERTFGHLRDEILE 71
Query: 79 XXXXPRRYHAWFSRSGVNSGNDNDDGISFPLSYNKLVERYPHIEWDHXXXXXXXXXXYKA 138
PRRYH+W+SRSG+ SG +DDGIS PLSY+ L+ERYPHIE DH +
Sbjct: 72 KGLLPRRYHSWWSRSGIYSGRADDDGISLPLSYDNLIERYPHIEKDHLVKLLKQLILNPS 131
Query: 139 SPFHGRIGGIAPNAADVPTLLGSGSFSLLECDRSMKYKQVKPLPAYLRWPHMQADQVHGL 198
P H R+ G APNAADVPTLLGSG+FSL++ +++ ++ + + +YLRWPHM ADQV GL
Sbjct: 132 FPSHMRVEGNAPNAADVPTLLGSGTFSLVDRSNNIESQKARHVASYLRWPHMHADQVRGL 191
Query: 199 SLREIGGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFV 258
SLREIGGGF+KHHRAPS+ SAC+AIAKPSTMVQKMQNIKKLRGHR+AVYCAIFDRSGR+V
Sbjct: 192 SLREIGGGFRKHHRAPSILSACHAIAKPSTMVQKMQNIKKLRGHRNAVYCAIFDRSGRYV 251
Query: 259 ITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGL 318
ITGSDDRLVKIWSMETA CLASCRGHEGDITDLAVSSNN LVASASNDFVIRVWRLPDG+
Sbjct: 252 ITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGM 311
Query: 319 PISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT 378
PISVLRGHTGAVTAIAFSPR +++YQLLSSSDDGTCRIWDARYSQ+ PRIY+P P DA T
Sbjct: 312 PISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANT 371
Query: 379 GKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPI 438
G QSHQILCCAYNANGT+FVTGSSD+ ARVWSA K +++D+EQP
Sbjct: 372 GSTSNAS----------QSHQILCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPT 421
Query: 439 HELDVLSGHENDVNYVQFSGCAVASRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA 498
HELDVL GHENDVNYVQFSGCAVA +S+ +DA KE++ PKFKNSWFCHDNIVTCSRDGSA
Sbjct: 422 HELDVLRGHENDVNYVQFSGCAVAPKSSTADALKEDSYPKFKNSWFCHDNIVTCSRDGSA 481
Query: 499 IIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXVNMIVWSLDNR 558
IIW PRSR+ HGK GRW + YHLKV VNMI+WSLDNR
Sbjct: 482 IIWTPRSRKFHGKSGRWMKGYHLKVPPPPLPPQPPRGGPRQRFLPTPRGVNMIIWSLDNR 541
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIW 618
FVLAAIMDCRICVWNA DGSLVH LTGHS SSYVLDVHPFNPRIAMSAGYDG+TI+WDIW
Sbjct: 542 FVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAGYDGKTIIWDIW 601
Query: 619 EGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDY 678
EG PI++YEIGRFKLVDGKFS DGTSIVLSDDVGQIY LNTGQGESQK+AKYDQFFLGDY
Sbjct: 602 EGIPIKVYEIGRFKLVDGKFSQDGTSIVLSDDVGQIYFLNTGQGESQKNAKYDQFFLGDY 661
Query: 679 RPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEEPYQSMYQQRRLGALGIEWRPS 738
RPLIRD+ G+VLDQETQL+PHRRN+QD LCDSSMIPY EP Q+M+QQRRLGALG+EWRPS
Sbjct: 662 RPLIRDTNGHVLDQETQLLPHRRNLQDLLCDSSMIPYPEPDQTMFQQRRLGALGVEWRPS 721
Query: 739 SIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDPVYWEPENEVISDDNDSEYNI--- 795
SIK ++G DFSLGQDY MPPL DL+R++EP+PEFID +YWEPE+EV+SDDNDSEYN
Sbjct: 722 SIKFSVGPDFSLGQDYIMPPLADLDRLIEPLPEFIDAMYWEPEHEVLSDDNDSEYNAEVS 781
Query: 796 -----AEECASEAEQ----GRDSEVEXXXXXXXXXXXXXXXXAEVELKTSSGRRVRKRNL 846
A C++ + + DS+VE +V + TSSGRR KR L
Sbjct: 782 SDGARASPCSNSSNELECSSEDSDVENIHESSYHWKRRRKH-PKVNVSTSSGRR-DKRIL 839
Query: 847 DERDGSASGSNRTXXXXXXXXXXXXXXXXXXXXRPQRVAARNARSMFSRITGTSTGXXXX 906
DE D S SG RT RPQR AA+NARS+ S+I+G+S+
Sbjct: 840 DENDSSNSGIKRTKNRRIVVKASKRKHSDVKASRPQRAAAQNARSLLSKISGSSSDEVDD 899
Query: 907 XXXXXXXXXXTVLQDSHVQS-KEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQS 965
D + + ++ D+ Q ++ ++++ ++ + KP E + S+
Sbjct: 900 DNDSSNSES-----DRSIPTLRQLDKPSQMLESLSNDKQKKRLIVKISVKKPAESMGSKG 954
Query: 966 DTGNRKRLVLKLSLRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGTTE-RKIDLSLKEP 1024
D N+ L +LS K L E+ RV G ++ P SSS +G + + I S+ P
Sbjct: 955 DVINQADLE-QLS----SKPLE-ENHRVIGI-YSREPGSSSVDAKGDSGCQSIPYSMNTP 1007
Query: 1025 GSSSAGSGIDVGLSQKHN 1042
A + + Q N
Sbjct: 1008 QREKADNQLIRSSDQDQN 1025
Score = 1023 (365.2 bits), Expect = 0., Sum P(2) = 0.
Identities = 206/407 (50%), Positives = 269/407 (66%)
Query: 1310 ASGIDSPEAASGSIRKTRSMKMKIISREPIAANCNFKSKNGHDLVGTSKTVGNSSMEAHD 1369
A + EA + IR+ RS++ + +R N + + G V K G S +D
Sbjct: 1124 AHNFEFGEATADVIRRKRSIRSESSTR-----NSALRIRLGSGSVDKIKKQGIPSTSVYD 1178
Query: 1370 EFFPEEWIPTSTVKSRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSWLMLSEHEEGYRY 1429
+ EEW TS SR RS + P L +G + N K+SWL+LSEHEEG RY
Sbjct: 1179 DASLEEWPSTSKAGSRSRSASVSK------PSLHTGIRLNSVSGKISWLLLSEHEEGCRY 1232
Query: 1430 IPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSINGYISAVETCKVVNLVYATFPGSGDSC 1489
IPQLGDEVIY +QGHQEF+++ + + + AVE CKV L Y T+PGSGDSC
Sbjct: 1233 IPQLGDEVIYFKQGHQEFLKTKELNDRDRSRYLPRNLGAVEICKVEKLNYDTYPGSGDSC 1292
Query: 1490 CKITLKFVDPSSSVLG-KAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRDKCQIWWRN 1548
CK+TL+ +D SSS K F+LTLPEL +FPDF+VEKT YDAAI NW ++C++WWR+
Sbjct: 1293 CKMTLRVLDSSSSHASRKEFQLTLPELINFPDFIVEKTRYDAAIQTNWKIGNECRVWWRD 1352
Query: 1549 ANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHDPNVMWEHPEI 1608
A GEGG WW+GRI SQ KS +FP SPW+RY V Y+TG++ LHSPWE +P WE I
Sbjct: 1353 ATGEGGAWWEGRIESSQVKSTDFPESPWERYRVVYETGETSLHSPWEFDNPEFPWEKSTI 1412
Query: 1609 DSESRDKLLSSFNKLEQSVSRKQDYYGIQRLNEAAQKLDYLNRFPVPLYPEVIRLRLVNN 1668
+ E R+KLLS F L +S+S+ QD YGIQ+LNEAAQK+D+ NRFPVPLYPE+I RL N
Sbjct: 1413 EDERREKLLSLFAGLVKSISKHQDSYGIQKLNEAAQKMDFCNRFPVPLYPELIHERLENQ 1472
Query: 1669 YYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRDWFNRTLNKL 1715
YYRS+E+ K D++ MLSNAE YF+++A + +K++RLRD +TL KL
Sbjct: 1473 YYRSIESFKHDVDAMLSNAELYFVRSAHMLSKIKRLRDKLTKTLRKL 1519
Score = 137 (53.3 bits), Expect = 8.8e-110, Sum P(2) = 8.8e-110
Identities = 46/135 (34%), Positives = 72/135 (53%)
Query: 943 EEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGD--DMAK 1000
E +++I + KP ++LES S+ +KRL++K+S++ K A S+ KGD + A
Sbjct: 907 ESDRSIPTLRQLDKPSQMLESLSNDKQKKRLIVKISVK--KPAESMGS---KGDVINQAD 961
Query: 1001 LPQSSSGPPQGTTERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIVFADGS-QDEKYDSQL 1059
L Q SS P + R I + +EPGSSS + D G I ++ + Q EK D+QL
Sbjct: 962 LEQLSSKPLE-ENHRVIGIYSREPGSSSVDAKGDSGCQS----IPYSMNTPQREKADNQL 1016
Query: 1060 EESAGDMENKTRWAE 1074
S+ +N +W E
Sbjct: 1017 IRSSDQDQNMCKWRE 1031
Score = 49 (22.3 bits), Expect = 1.7e-100, Sum P(2) = 1.7e-100
Identities = 39/206 (18%), Positives = 74/206 (35%)
Query: 1161 DIKKSSSFNSTPLVDHQQ--NDDVHKSRNEDV----GTNYRDELKENPPLRVRIRTKGIL 1214
++ SS ++D N + +++N + ++K + P R + L
Sbjct: 826 NVSTSSGRRDKRILDENDSSNSGIKRTKNRRIVVKASKRKHSDVKASRPQRAAAQNARSL 885
Query: 1215 RDTKSPSEQKSSTSVKDLPSAESD-PIPMSESSLCMEGNLMSEVPEEAEGYGRSSSDQLL 1273
S S D ++ESD IP L ++ + + + ++
Sbjct: 886 LSKISGSSSDEVDDDNDSSNSESDRSIPTLRQ-LDKPSQMLESLSND-----KQKKRLIV 939
Query: 1274 NSNLKFKVRD-GSKSSYKTRTDIEAFDGG-MEDGINHEASGIDSPEAASGSIRKTRSMKM 1331
++K GSK + D+E +E+ NH GI S E S S+
Sbjct: 940 KISVKKPAESMGSKGDVINQADLEQLSSKPLEE--NHRVIGIYSREPGSSSVDAKGDSGC 997
Query: 1332 KIISREPIAANCNFKSKNGHDLVGTS 1357
+ I P + N + K + L+ +S
Sbjct: 998 QSI---PYSMNTPQREKADNQLIRSS 1020
>TAIR|locus:2158044 [details] [associations]
symbol:AT5G49430 "AT5G49430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0080008 KO:K11797 IPI:IPI00523511
RefSeq:NP_199754.2 UniGene:At.51087 ProteinModelPortal:F4K639
PRIDE:F4K639 EnsemblPlants:AT5G49430.1 GeneID:835003
KEGG:ath:AT5G49430 OMA:CCAFNAN Uniprot:F4K639
Length = 1677
Score = 2979 (1053.7 bits), Expect = 0., Sum P(2) = 0.
Identities = 601/1043 (57%), Positives = 718/1043 (68%)
Query: 14 SLGKAPLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGPCQRTXXXXX 73
SL PL FS + Q+ D+V + D+DLREVYFL++H LSSGPCQ+T
Sbjct: 14 SLPMKPLNFSRKLPGNVQIPDPDIVQSVAPNIDLDLREVYFLMLHLLSSGPCQKTYALLR 73
Query: 74 XXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGISFPLSYNKLVERYPHIEWDHXXXXXXXX 133
PRRYHAW+SRSG+ SG++NDDG SFPL+Y +L +RY H++ DH
Sbjct: 74 HELLEHELLPRRYHAWYSRSGLPSGDENDDGNSFPLNYTELAKRYSHVKKDHLVELLKQL 133
Query: 134 XXYKASPFHGR-IG-GIAPNAADVPTLLGSGSFSLLECDRSMKYKQVKPLPAYLRWPHMQ 191
P R IG G A VPTLLG+GSFSLL D+ + +KP P +RWPHM
Sbjct: 134 VFVSNRPNPSRGIGDGNKMIGAGVPTLLGTGSFSLLSSDKEIVGSDLKPPPIGMRWPHMH 193
Query: 192 ADQVHGLSLREIGGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIF 251
ADQV G+SLREIGGGF +HHRAPS+ +ACY IAKPS+MVQKMQNIK+LRGHR+AVYCAI
Sbjct: 194 ADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNIKRLRGHRNAVYCAIL 253
Query: 252 DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRV 311
DRSGR+VITGSDDRLVK+WSM+TA+CLASCRGHEGDITDLAVSSNN +ASASND VIRV
Sbjct: 254 DRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDCVIRV 313
Query: 312 WRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLP 371
WRLPDGLP+SVLRGHTGAVTAIAFSPRP + YQLLSSSDDGTCRIWDAR +Q++PRIY+P
Sbjct: 314 WRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIWDARGAQFAPRIYVP 373
Query: 372 KPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARV---WSACK 428
+PP GK QSHQI CCA+NA+G+VFVTGSSDT ARV WSA K
Sbjct: 374 RPPSP-DGKNSGPSSSNAQ-----QSHQIFCCAFNASGSVFVTGSSDTLARVYSVWSANK 427
Query: 429 SSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDAFKEENVPKFKNSWFCHDN 488
++ +D EQP HE+DVL+GHENDVNYVQFSGCA S+ +++D K+ENVPKFKNSWFCHDN
Sbjct: 428 TNTDDPEQPNHEMDVLAGHENDVNYVQFSGCAAGSKFSVTDYSKDENVPKFKNSWFCHDN 487
Query: 489 IVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXV 548
IVTCSRDGSAIIWIPR RRSHGK RWTRAYHLKV V
Sbjct: 488 IVTCSRDGSAIIWIPRLRRSHGKSCRWTRAYHLKVPPPPMPPQPPRGGPRQRILPTPRGV 547
Query: 549 NMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGY 608
NMI WSLDNRFVLAAIMDCRICVWNA DGSLVHSLTGH+AS+YV+DVHPFNPRIAMSAGY
Sbjct: 548 NMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAGY 607
Query: 609 DGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDA 668
DG+TIVWDIWEG PI+IY+I +KLVDGKFSPDGTSI+LSDDVGQ+Y+L+TGQG+SQKDA
Sbjct: 608 DGKTIVWDIWEGIPIQIYDISHYKLVDGKFSPDGTSIILSDDVGQLYILSTGQGDSQKDA 667
Query: 669 KYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEEPYQSMYQQRRL 728
KYDQFFLGDYRPLI+D+ GNVLDQE+QL P+RRN++DPLCDS MIPYEEPYQ+ +Q+RRL
Sbjct: 668 KYDQFFLGDYRPLIQDTYGNVLDQESQLQPYRRNMEDPLCDSGMIPYEEPYQTTFQKRRL 727
Query: 729 GALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDPVYWEPENEVISDD 788
GALG EWRPSS+KLA+G D +L +DY MPPL DL+ + EP+PEFID + WEPE +++SD+
Sbjct: 728 GALGKEWRPSSLKLAVGPDITLDRDYQMPPLADLD-LAEPLPEFIDVMEWEPEVDILSDE 786
Query: 789 NDSEYNIAEECASEAEQ--------GR------DSEVEXXXXXXXXXXXXXXXXAEVELK 834
NDSEYN+ EE +S EQ G +S + E +
Sbjct: 787 NDSEYNVPEEYSSGKEQECLNSSTSGESGSSSGESYEDDDHQNSLRRSKRKKHKKEAGIM 846
Query: 835 TSSGRRVRKRNLDERDGSASGSNRTXXXXXXXXXXXXXXXXXXXXRPQRVAARNARSMFS 894
TSSGRRV+KRN DE +G+ S RT RP+R AARNA S FS
Sbjct: 847 TSSGRRVKKRNFDELEGAPSNKKRTRKSRSGRKESKRKSSKSKSSRPRRAAARNALSWFS 906
Query: 895 RITGTSTGXXXXXXX--XXXXXXXTVLQDSHVQSKEDDRNLQNMQQQHKREEEQTIVESE 952
+ITGTS + QDS E + L N + + + + +S+
Sbjct: 907 KITGTSKDAEEEEVSELSDSSESESTTQDSGTGDSELEVALLNGHGKQSKGKTILVCDSD 966
Query: 953 FMGKPLELLESQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGT 1012
+ ++ E+ T R+RLVL+ +R+ K LE+ LP SS P T
Sbjct: 967 DGAQQCDIRETH--TAERRRLVLRFPVRNSDKLTLLEN----------LPGSSCDVPSPT 1014
Query: 1013 TERKIDLSLKEPGSSSAGSGIDV 1035
+ PG+ G+DV
Sbjct: 1015 LGNGCTEDSRIPGNQF--EGLDV 1035
Score = 1005 (358.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 252/663 (38%), Positives = 362/663 (54%)
Query: 1068 NKTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIGDVNRCVKLENGHGKFSSNSETSC 1127
+K +W VK RT+KR + ++ + +D G N VK ++ H N T+
Sbjct: 1036 SKVKWGMVKARTTKRIRGEAI----SSHELMGSDPEGKENN-VKEDSNH---RGNGVTA- 1086
Query: 1128 YGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRN 1187
SC + + D +D +V L K+ + +P + DD K+ N
Sbjct: 1087 ----PSCLELKTDIDDMAVDTDTVISNGLPNGG--KRYPELDGSP---SRVADD--KASN 1135
Query: 1188 EDVGTNYRDELKEN-PPLR--VRIRTKGILR--DTKSPSEQKSSTSVKDLPSAESDPIPM 1242
+R +L ++ PP+ ++IR+K + R DT E KS S+ D + SD +
Sbjct: 1136 SSQNVTHRHDLIDSLPPISTTLKIRSKRVSRAPDTSLRQEGKS-LSI-DQETGGSDALND 1193
Query: 1243 S-ESSLC-MEGNLMSEVPEEAEGYGRSSSDQLLNSNL--KFKVRDG---SKSSYKTRTDI 1295
E + C + + + E R+ LN + + + S S K D
Sbjct: 1194 GFEDAKCDLTLDCQKDGVVGTEISLRNDCVLELNPQICDALSIANDVPVSHSHPKRMFDF 1253
Query: 1296 EAFDGGMEDGINHEASGIDSPEAASGSIRKTRSMKMKIISREPIAANCNFKSKNGHDLVG 1355
+ N + + E + GS + K S E + + NG +
Sbjct: 1254 VYRRKSRKHKNNLDRDAALTKEVSPGSCSQDHGSGSK--SHEGASNGFHGTELNGLEKSE 1311
Query: 1356 TSKT-VGNSSMEAH-DEFFPEEWIPTSTVKSRPRSTRNRRGDHD-GHPCLLSGRKSNFPV 1412
S T + + ++ ++ EE S R RSTRNR+ + + +K +
Sbjct: 1312 GSLTHIQDKISDSRGNQNSQEELRSASGATLRLRSTRNRKSTYPFSETKPIETKKPQQLI 1371
Query: 1413 RKLSWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSING-YISAVET 1471
+SWL LS HEEG RYIPQ+GDEV Y RQGHQE++ + +EV PW SI G I AVE
Sbjct: 1372 ENVSWLTLSIHEEGSRYIPQMGDEVAYLRQGHQEYLNFSSLREVAPWTSIKGGNIKAVEI 1431
Query: 1472 CKVVNLVYATFPGSGDSCCKITLKFVDPSSSVLGKAFKLTLPELRDFPDFVVEKTLYDAA 1531
CKV +L YAT PGSGDSCCK+ LK +DP+S V KAFKLTLPE+ FPDF+VE++ Y+AA
Sbjct: 1432 CKVESLEYATLPGSGDSCCKMILKVIDPNSEVFNKAFKLTLPEVVTFPDFLVERSRYEAA 1491
Query: 1532 ISRNWTHRDKCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKT--GDSH 1589
I RNWT RDKC++WWR+ E G+WW+GRI + KS +FP+SPW+RY V+YK+ ++H
Sbjct: 1492 IQRNWTCRDKCKVWWRDEGEEDGSWWEGRILAVKPKSPDFPDSPWERYTVKYKSDPAETH 1551
Query: 1590 LHSPWEMHDPNVMWEHPEIDSESRDKLLSSFNKLEQSVSRKQDYYGIQRLNEAAQKLDYL 1649
LHSPWE+ D + WE P ID E R++LLS+ KLE S R QD +G+++LN+ Y
Sbjct: 1552 LHSPWELFDADTKWEQPHIDDEQRNRLLSALTKLETSDKRTQDSFGLRKLNQTVGNSSYS 1611
Query: 1650 NRFPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRDWFN 1709
NRFPVPL EVIR RL NNYYRS+EA + D++VMLSNAE++F +N +++AK+ L +WF+
Sbjct: 1612 NRFPVPLSLEVIRSRLENNYYRSVEALRHDVSVMLSNAETFFGRNKSVAAKISNLSNWFD 1671
Query: 1710 RTL 1712
RTL
Sbjct: 1672 RTL 1674
Score = 39 (18.8 bits), Expect = 1.1e-96, Sum P(2) = 1.1e-96
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 1039 QKHNR---IVFADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSS 1085
+KH + I+ + G + +K + E A + +TR + + SKR SS
Sbjct: 837 KKHKKEAGIMTSSGRRVKKRNFDELEGAPSNKKRTRKSRSGRKESKRKSS 886
>UNIPROTKB|F1MTQ0 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS
GeneTree:ENSGT00700000104382 EMBL:DAAA02003179 IPI:IPI00685238
Ensembl:ENSBTAT00000018087 Uniprot:F1MTQ0
Length = 2322
Score = 349 (127.9 bits), Expect = 9.7e-76, Sum P(7) = 9.7e-76
Identities = 105/322 (32%), Positives = 159/322 (49%)
Query: 110 SYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGSFSLLEC 169
SY +LV H+ DH + P + I P+ + V +LLG+G SLL
Sbjct: 62 SYEELVLSNKHVAPDHLLQICQ-----RIGPMLDK--EIPPSISRVTSLLGAGRQSLLRT 114
Query: 170 DRSMKYKQVKPLP-AYL---RWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACYAIAK 225
+ ++ K A L R P M + +L EI G + + CS ++ A
Sbjct: 115 AKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEIHRG-----KQLTGCST-FSTAF 168
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
P M Q ++ +++ GH AVYC FDR+G + TGSDD LVKIWS L++ RGH
Sbjct: 169 PGAMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHS 228
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ- 344
+I+D+AV+ NT++A+ S D +IRVW L P++VL+GHTG++T++ FSP +
Sbjct: 229 AEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRY 288
Query: 345 LLSSSDDGTCRIW--DARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILC 402
++S+ DGT W D ++SPR P T K Q+LC
Sbjct: 289 MVSTGADGTVCFWQWDLESLKFSPR------PLKFTEKPRPGV-------------QMLC 329
Query: 403 CAYNANGTVFVTGSSDTFARVW 424
+++ G TGS+D R++
Sbjct: 330 SSFSVGGMFLATGSTDHVIRMY 351
Score = 310 (114.2 bits), Expect = 9.7e-76, Sum P(7) = 9.7e-76
Identities = 87/266 (32%), Positives = 126/266 (47%)
Query: 473 EENVPKFKNSWFCH--DNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXX 530
E + K + FC+ D ++ SRDG+A IW R + W R+ L +
Sbjct: 365 ESHTDKVDSIQFCNNGDRFLSGSRDGTARIW--RFEQLE-----W-RSILLDMATRISGD 416
Query: 531 XXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASS 590
V MI W+ ++ V+ A+ D + VWN+ G L+H+L GH+
Sbjct: 417 LSLEEERFMKPK-----VTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLLGHADEV 471
Query: 591 YVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSI 645
+VL+ HPF+ RI +SAG+DG +WDI +GT ++ Y I G + D KFS DG
Sbjct: 472 FVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHF 531
Query: 646 VLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQD 705
+D G + + G + + FF DYRPLIRDS VLD++TQ PH +
Sbjct: 532 ACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHL--MPP 589
Query: 706 P-LCDSSMIPYEEPYQSMYQQRRLGA 730
P L D P+ YQ + R A
Sbjct: 590 PFLVDVDGNPHPTKYQRLVPGRENSA 615
Score = 233 (87.1 bits), Expect = 9.7e-76, Sum P(7) = 9.7e-76
Identities = 62/228 (27%), Positives = 118/228 (51%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDEVIY RQGH+ +IE+ + PW ++ + E K+V + Y
Sbjct: 957 FVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPNKEPWRKMD--LRDQELVKIVGIRYEV 1014
Query: 1482 FPGSGDSCCKITLKFVDPSSS-VLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
P + CC + L F+DP++ ++ K+F + ++ D DF+V + YD A RNW D
Sbjct: 1015 GPPT--LCC-LKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQSCD 1071
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHD-P 1599
+ +R+ + WW G + + + ++P+S + Y+V + + SPW+M P
Sbjct: 1072 R----FRSIIDDA--WWFGTVLRQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIP 1125
Query: 1600 NVMWEHPEIDSESRDKLLSSFNKLEQSVSRKQD-YYGIQRLNEAAQKL 1646
+ + + PE E + + ++LE+ + + QD +G + +E +++
Sbjct: 1126 DNV-DPPE---ELGASISVTSDELEKLLYKPQDGEWGQKSRDEECERI 1169
Score = 123 (48.4 bits), Expect = 2.9e-25, Sum P(6) = 2.9e-25
Identities = 41/141 (29%), Positives = 62/141 (43%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGD-- 287
+ I +L H D V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLS 418
Query: 288 ----------ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
+T +A + N+++V +A ND V++VW G + L GH V + P
Sbjct: 419 LEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLLGHADEVFVLETHP 478
Query: 338 RPSAIYQLLSSSDDGTCRIWD 358
S I +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 106 (42.4 bits), Expect = 1.4e-23, Sum P(6) = 1.4e-23
Identities = 39/135 (28%), Positives = 57/135 (42%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S +A+ S D VIR++ L P I+ L HT V +I F + LS S D
Sbjct: 333 SVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGD---RFLSGSRD 389
Query: 352 GTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTV 411
GT RIW R+ Q R L I+G ++ A+N N ++
Sbjct: 390 GTARIW--RFEQLEWRSILLDMATRISGDLSLEEER-------FMKPKVTMIAWNQNDSI 440
Query: 412 FVTGSSDTFARVWSA 426
VT +D +VW++
Sbjct: 441 VVTAVNDHVLKVWNS 455
Score = 80 (33.2 bits), Expect = 2.8e-22, Sum P(7) = 2.8e-22
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
DC + +W+ +G L+ +L GHSA + V+ N IA AG + I VW + P+
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIA--AGSCDKIIRVWCLRTCAPVA 264
Query: 625 IYEIGRFKLVDGKFSP 640
+ + + +FSP
Sbjct: 265 VLQGHTGSITSLQFSP 280
Score = 78 (32.5 bits), Expect = 8.5e-21, Sum P(6) = 8.5e-21
Identities = 25/116 (21%), Positives = 56/116 (48%)
Query: 227 STMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEG 286
+T + ++++ R + V ++++ V+T +D ++K+W+ T L + GH
Sbjct: 410 ATRISGDLSLEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLLGHAD 469
Query: 287 DITDLAVSS-NNTLVASASNDFVIRVWRLPDGLPI----SVLRGHT-GAVTAIAFS 336
++ L ++ ++ SA +D I +W + G + +++ G GAV FS
Sbjct: 470 EVFVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHGAVFDCKFS 525
Score = 75 (31.5 bits), Expect = 9.7e-76, Sum P(7) = 9.7e-76
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRD 1706
+P LY IR+RLVN +YR L A ++ + NA ++ + ++ +++ D
Sbjct: 1203 YPTDLY--TIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITD 1255
Score = 74 (31.1 bits), Expect = 9.7e-76, Sum P(7) = 9.7e-76
Identities = 23/75 (30%), Positives = 33/75 (44%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGISFPLS 110
E+YFLI +LS+GPC+R P+R W GN+++ S
Sbjct: 17 ELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGNEHNR------S 62
Query: 111 YNKLVERYPHIEWDH 125
Y +LV H+ DH
Sbjct: 63 YEELVLSNKHVAPDH 77
Score = 68 (29.0 bits), Expect = 5.6e-57, Sum P(5) = 5.6e-57
Identities = 101/540 (18%), Positives = 205/540 (37%)
Query: 779 EPENEVISDDNDSEYNIAEECASEAEQGRDSEVEXXXXXXXXXXXXXXXXAE-----VEL 833
E E+ + + + S N +EE + E+ + RDS A+ V L
Sbjct: 1534 EMEDSLGTSSSSSASNSSEE-SKESPRARDSSSRSGLARSSNLRVTRTRAAQRKTGPVSL 1592
Query: 834 KTSSGRRVRKRNLDERDGSASGSNRTXXXXXXXXXXXXXXXXXXXXRPQRVAARNARSMF 893
+ GR+ ++ + S S+ + VAA + M
Sbjct: 1593 ENGCGRKATRKRV-----YLSDSDNNSLATGESVKVRAGNNRKVLRKCAAVAANKIKLM- 1646
Query: 894 SRITGTSTGXXXXXXXXXXXXXXTVLQDSHVQSKEDDRNLQNMQQQHKREEEQTIVESEF 953
S + ST + + + + EDD++L++ ++ + +++ + + +
Sbjct: 1647 SDVEENSTSESVCSGRKLPHRNASAVARKLLHNSEDDQSLKSELEEEELKDQLSPLSNSL 1706
Query: 954 MGKPLEL--LESQSD----------TGNRKRLVLKLSLRDHKKALSLEDTRVKGDDMAKL 1001
+ E ES+SD G + ++ + K A S ED++ D
Sbjct: 1707 AAQNTENGDSESESDLRVARKNWHANGYKSQIPATSKTKFLKIASSEEDSKSHDSDNGH- 1765
Query: 1002 PQSSSGPPQGTTERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIVFADGSQDEKY--DSQL 1059
++GP + K + S+ E A S ++K++ ++ G ++ + ++L
Sbjct: 1766 -SRTAGPSTSLLKLKAE-SISEE-EEKANSE-----TRKYSSRKYSTGRKNAPFLKKAKL 1817
Query: 1060 EESAGDMENKTRWAEVKIRTSKRSSSSG-VLLPPDANFDVHNDSIG----DVNRCVKLEN 1114
+ D E+ + + + + SSG V P A +D + D + K +
Sbjct: 1818 FSDSEDSESDKEDGQDRCHKMEMNPSSGNVECEPAARSQCFSDHVSETDLDSDDDKKAKE 1877
Query: 1115 GHGKFSSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLV 1174
F +S + +G R + K SD+ + V+K AR ++ +T
Sbjct: 1878 KPNSFIKDSASQNHGQSRKAARKRVCSSDSDSNSKVVKKASRARPGLLRVPRRCATTAAS 1937
Query: 1175 DHQQNDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPS 1234
+ D R + V T ++ K+ PL + +P+++ S S D+ +
Sbjct: 1938 RIKLMSDEEDGRVDHVCTRRKNARKK--PLHIAC----------APAQKIDSNSEGDV-N 1984
Query: 1235 AESDPIPMSESSLCMEGNLMSEVPEEAEGYGRSSSDQLL-NSNLKFKVRDGSKSSYKTRT 1293
E +P +E S C EG + ++EG +S S L +S+ + + G K+ + TR+
Sbjct: 1985 CE---VP-NEQSGC-EGQPLDA---DSEGSAKSISQSLNEDSDSEGVLNSGHKNRH-TRS 2035
Score = 66 (28.3 bits), Expect = 1.4e-46, Sum P(7) = 1.4e-46
Identities = 23/71 (32%), Positives = 30/71 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 228 SAEISDMAVNYENTMIAAGSCDKIIRVW--CLRTCA----PVA---VLQGHTGSITSLQF 278
Query: 457 SGCAVASRSAM 467
S A S+ M
Sbjct: 279 SPMAKGSQRYM 289
Score = 65 (27.9 bits), Expect = 1.1e-56, Sum P(5) = 1.1e-56
Identities = 62/284 (21%), Positives = 109/284 (38%)
Query: 943 EEEQTIVESEF-MGKPL--ELLESQS----DTGNRKRLVLKLSLRDHKKALSLEDTRVKG 995
EE+ + S+F +G+ +L SQ NR K S+R+ K+ T+V
Sbjct: 1413 EEKMKKISSDFKIGQKFSEKLRRSQRFKRRQNCNRVNQANK-SIRNTKQKRLKSQTKVIS 1471
Query: 996 DDMAKLPQSSSGPPQGTTERKIDLSLKEPGSSSAGSGIDVGLSQK--HNR-IVFADGS-- 1050
+ + Q +S + K S+ G +S S S++ NR + +GS
Sbjct: 1472 EFVGSPIQPTSSRATYSASHKTTASVSS-GVTSGDSSDSAASSERMRRNRPVTLTNGSTL 1530
Query: 1051 -QDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIGDVNRC 1109
+ E DS S+ N + ++ R SS SG L +N V
Sbjct: 1531 SESEMEDSLGTSSSSSASNSSEESKESPRARDSSSRSG--LARSSNLRVTRTRAAQRKTG 1588
Query: 1110 -VKLENGHGK-------FSSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHED 1161
V LENG G+ + S+S+ + S + L A+V ++ D
Sbjct: 1589 PVSLENGCGRKATRKRVYLSDSDNNSLATGESVKVRAGNNRKVLRKCAAVAANKIKLMSD 1648
Query: 1162 IKKSSSFNST---PLVDHQQNDDVHKS--RNEDVGTNYRDELKE 1200
++++S+ S + H+ V + N + + + EL+E
Sbjct: 1649 VEENSTSESVCSGRKLPHRNASAVARKLLHNSEDDQSLKSELEE 1692
Score = 65 (27.9 bits), Expect = 8.1e-21, Sum P(7) = 8.1e-21
Identities = 34/128 (26%), Positives = 49/128 (38%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF---NPRIAMSAGYDGRT 612
+N + A D I VW + V L GH+ S L P + R +S G DG
Sbjct: 239 ENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTV 298
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQ 672
W W+ ++ + K + K P + S VG ++L TG D
Sbjct: 299 CFWQ-WDLESLK-FSPRPLKFTE-KPRPGVQMLCSSFSVGGMFLA-TGS----TDHVIRM 350
Query: 673 FFLGDYRP 680
+FLG P
Sbjct: 351 YFLGFEAP 358
Score = 64 (27.6 bits), Expect = 1.3e-57, Sum P(6) = 1.3e-57
Identities = 45/245 (18%), Positives = 91/245 (37%)
Query: 1018 DLSLKEPGSSSAGSGIDVGLSQKHNRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVKI 1077
D++ + P S G + + + + S +E DS+ ++G TR + +
Sbjct: 1982 DVNCEVPNEQSGCEGQPLDADSEGSAKSISQ-SLNEDSDSEGVLNSGHKNRHTRSLKTSV 2040
Query: 1078 RTSKRSSSSGVLLPPDANFDVHNDSIGDVNRCVKLEN-GHGKFSSNS--ETSCYGCVRSC 1134
+SK ++ V L D+ + IG +C H + N+ E YG R
Sbjct: 2041 ASSKTKNALIVSLEEDSKSHIPRGEIG--RKCSSESTLVHKATAENNFEEELNYGLRRWN 2098
Query: 1135 SDKEK-FGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQND-------DVHKSR 1186
+ + +G VR + A ++K+ V + D
Sbjct: 2099 GRRLRTYGKAPFSKTKVVRDSQEAAETEVKRKRLQTELENVKASETTGSSKCGPDTSPKS 2158
Query: 1187 NEDVGTNYRDELKENPPLRVRIR-TKG---ILRDTKSPSEQKSSTSVKDLPSAESDPIPM 1242
+ D+G+ + + + R TKG ++R P +++ +T ++ + D +PM
Sbjct: 2159 DSDLGSATESDADCTDDSKTKKRKTKGKAKVVRKESVPRDREPNTKMRTCVHNQKDAVPM 2218
Query: 1243 SESSL 1247
+L
Sbjct: 2219 PSETL 2223
Score = 59 (25.8 bits), Expect = 5.3e-74, Sum P(7) = 5.3e-74
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ +R L NY LE KD I ++ SNA++Y K + + + RL
Sbjct: 1350 DYRDIIDTPMDFGTVRETLEAGNYDSPLEFCKD-IRLIFSNAKAYTPNKRSKIYSMTLRL 1408
Query: 1705 RDWFNRTLNKL 1715
F + K+
Sbjct: 1409 SALFEEKMKKI 1419
Score = 58 (25.5 bits), Expect = 1.3e-57, Sum P(6) = 1.3e-57
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 930 DRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQS 965
+++++N +Q KR + QT V SEF+G P++ S++
Sbjct: 1452 NKSIRNTKQ--KRLKSQTKVISEFVGSPIQPTSSRA 1485
Score = 57 (25.1 bits), Expect = 1.2e-45, Sum P(7) = 1.2e-45
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ G TGS D ++WS
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 54 (24.1 bits), Expect = 1.1e-57, Sum P(5) = 1.1e-57
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 716 EEPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDP 775
+EPYQ Y + W + I+ D D PP E+L + + ++
Sbjct: 1089 QEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVDPP-EELGASISVTSDELEK 1147
Query: 776 VYWEPEN 782
+ ++P++
Sbjct: 1148 LLYKPQD 1154
Score = 53 (23.7 bits), Expect = 9.7e-76, Sum P(7) = 9.7e-76
Identities = 36/148 (24%), Positives = 59/148 (39%)
Query: 1111 KLENGHGKFSSNS---ETSCYGCVRSCS-DKEKFGSDALLDLASVRKEELA-RHEDIKKS 1165
+LE G SS+S ETSC SCS ++E++ SD + S + + R+ D
Sbjct: 812 RLELSSGNESSSSIRHETSCDQSEGSCSSEEEEWKSDRRSESDSESSSDSSSRYSDWTAD 871
Query: 1166 SSFN-STPLVDHQQ---------NDDVHKSRNEDVGTNYRDELKENPPLRVRIR--TKGI 1213
+ + PL + ++D + N R KEN P + +R T+
Sbjct: 872 AGIHLQPPLRTSSRRRITRFCSSSEDEMSAENLSPPKRRRKRKKENKPKKENLRRMTQAE 931
Query: 1214 LRDTKSPSEQKSSTSVKDLPSAESDPIP 1241
L D + E + D +S +P
Sbjct: 932 LADVEHLYEFHPPVWITDTTLRKSPFVP 959
Score = 44 (20.5 bits), Expect = 1.1e-56, Sum P(5) = 1.1e-56
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 766 MEPVPEFIDPVYWEPENEVISDDNDSEYNIAEECASEAEQGRDSEVE 812
MEP+P+ +DP + ++ D + + ++ RD E E
Sbjct: 1121 MEPIPDNVDPPEELGASISVTSDELEKLLYKPQDGEWGQKSRDEECE 1167
Score = 44 (20.5 bits), Expect = 1.4e-55, Sum P(6) = 1.4e-55
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 1169 NSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDT 1217
N + L + + D + S + +N +E KE+P R G+ R +
Sbjct: 1526 NGSTLSESEMEDSLGTSSSSSA-SNSSEESKESPRARDSSSRSGLARSS 1573
Score = 42 (19.8 bits), Expect = 1.6e-74, Sum P(7) = 1.6e-74
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 1370 EFFPEEWIPTSTVKSRP 1386
EF P WI +T++ P
Sbjct: 940 EFHPPVWITDTTLRKSP 956
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 5/25 (20%), Positives = 15/25 (60%)
Query: 356 IWDARYSQYSPRIYLPKPPDAITGK 380
+W+ RY +++ R + P+++ +
Sbjct: 1226 VWEVRYIEHNARTF--NEPESVIAR 1248
Score = 37 (18.1 bits), Expect = 9.7e-76, Sum P(7) = 9.7e-76
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 919 LQDSHVQSKEDDRNLQNMQQQHK 941
L+D ++ E +RNL + ++ K
Sbjct: 754 LEDFRIEKGEQERNLYIIGRKRK 776
>MGI|MGI:1890651 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:1890651 GO:GO:0005634 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 CTD:54014 HOVERGEN:HBG080933 KO:K11798
ChiTaRS:BRWD1 EMBL:AJ292467 EMBL:AJ292468 EMBL:AC144797
EMBL:AC152502 IPI:IPI00121655 IPI:IPI01007673 RefSeq:NP_001096649.1
RefSeq:NP_660107.2 UniGene:Mm.240871 UniGene:Mm.482469
ProteinModelPortal:Q921C3 SMR:Q921C3 IntAct:Q921C3
PhosphoSite:Q921C3 PRIDE:Q921C3 Ensembl:ENSMUST00000023631
Ensembl:ENSMUST00000099502 Ensembl:ENSMUST00000113829 GeneID:93871
KEGG:mmu:93871 UCSC:uc008aci.2 UCSC:uc008ack.2
GeneTree:ENSGT00700000104382 HOGENOM:HOG000095265 InParanoid:Q921C3
NextBio:351749 Bgee:Q921C3 CleanEx:MM_BRWD1 Genevestigator:Q921C3
GermOnline:ENSMUSG00000022914 Uniprot:Q921C3
Length = 2304
Score = 359 (131.4 bits), Expect = 7.3e-75, Sum P(6) = 7.3e-75
Identities = 108/322 (33%), Positives = 160/322 (49%)
Query: 110 SYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGSFSLLEC 169
SY +LV H+ DH + P + + P+ + V +LLG+G SLL
Sbjct: 62 SYEELVLSNKHVAPDHLLQICQ-----RIGPMLDK--EVPPSISRVTSLLGAGRQSLLRT 114
Query: 170 DRSMKYKQVKPLP-AYL---RWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACYAIAK 225
+ ++ K A L R P M + SL EI G R + CS ++ A
Sbjct: 115 AKDCRHTVWKGSAFAALHRGRPPEMPVNYGPPPSLVEIHRG-----RQLTGCST-FSTAF 168
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
P TM Q ++ +++ GH AVYC FDR+G + TGSDD LVKIWS L++ RGH
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHS 228
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ- 344
+I+D+AV+ NTL+A+ S D +IRVW L P++VL+GHTG++T++ FSP +
Sbjct: 229 AEISDMAVNYENTLIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGPQRY 288
Query: 345 LLSSSDDGTCRIW--DARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILC 402
++S+ DGT W D ++SPR P T K Q+LC
Sbjct: 289 MVSTGADGTVCFWQWDLESLKFSPR------PLKFTEKPRPGV-------------QMLC 329
Query: 403 CAYNANGTVFVTGSSDTFARVW 424
+++ G TGS+D R++
Sbjct: 330 SSFSVGGMFLATGSTDHVIRMY 351
Score = 300 (110.7 bits), Expect = 7.3e-75, Sum P(6) = 7.3e-75
Identities = 85/266 (31%), Positives = 125/266 (46%)
Query: 473 EENVPKFKNSWFCH--DNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXX 530
E + K + FC+ D ++ SRDG+A IW R + W R+ L +
Sbjct: 365 ESHTDKVDSIQFCNNGDRFLSGSRDGTARIW--RFEQLE-----W-RSILLDMSARISGD 416
Query: 531 XXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASS 590
V MI W+ D+ V+ A+ D + VW++ G L+H+L GH+
Sbjct: 417 TSSEEERFMKPK-----VTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEV 471
Query: 591 YVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSI 645
+VL+ HPF+ RI +SAG+DG +WDI +G ++ Y I G + D KFS DG
Sbjct: 472 FVLETHPFDSRIMLSAGHDGSIFIWDITKGIKMKHYFNMIEGQGHGAVFDCKFSQDGQHF 531
Query: 646 VLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQD 705
+D G + + G + + FF DYRPLIRDS VLD++TQ PH +
Sbjct: 532 ACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHL--MPP 589
Query: 706 P-LCDSSMIPYEEPYQSMYQQRRLGA 730
P L D P+ +Q + R A
Sbjct: 590 PFLVDVDGNPHPTKFQRLVPGRENSA 615
Score = 226 (84.6 bits), Expect = 7.3e-75, Sum P(6) = 7.3e-75
Identities = 62/239 (25%), Positives = 112/239 (46%)
Query: 1367 AHDEFFPEEWIPTSTVKSRPRSTRNRRGD-HDGHPCLLSGRKSNFPVRKLSWLMLSEHEE 1425
+ DE E P + R + ++ +R P L+ + + W+ + +
Sbjct: 896 SEDEMSMENISPPKRRRKRRKESKPKRESLRRMTPAELANMEHLYEFHPPVWITDTTLRK 955
Query: 1426 GYRYIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLV 1478
++PQ+GDEV+Y RQGH+ +IE+ + PW ++ + E K+V L
Sbjct: 956 S-PFVPQMGDEVMYFRQGHEAYIEAVRRNNIYELNPHKEPWRKMD--LRDQELVKIVGLR 1012
Query: 1479 YATFPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWT 1537
Y P + CC + L F+DP++ L K+F + ++ D DF+V + YD A RNW
Sbjct: 1013 YEVGPPT--LCC-LKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQ 1069
Query: 1538 HRDKCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEM 1596
D+ +R+ + WW G + + ++P+S + Y+V + ++ SPW+M
Sbjct: 1070 PCDR----FRSIIDDA--WWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTETEKLSPWDM 1122
Score = 113 (44.8 bits), Expect = 2.9e-23, Sum P(5) = 2.9e-23
Identities = 40/141 (28%), Positives = 61/141 (43%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGD-- 287
+ I +L H D V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMSARISGDTS 418
Query: 288 ----------ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
+T +A + +++ V +A ND V++VW G + L GH V + P
Sbjct: 419 SEEERFMKPKVTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHP 478
Query: 338 RPSAIYQLLSSSDDGTCRIWD 358
S I +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 103 (41.3 bits), Expect = 2.9e-22, Sum P(5) = 2.9e-22
Identities = 39/135 (28%), Positives = 56/135 (41%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S +A+ S D VIR++ L P I+ L HT V +I F + LS S D
Sbjct: 333 SVGGMFLATGSTDHVIRMYFLGFDAPEKIAELESHTDKVDSIQFCNNGD---RFLSGSRD 389
Query: 352 GTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTV 411
GT RIW R+ Q R L I+G ++ A+N + +
Sbjct: 390 GTARIW--RFEQLEWRSILLDMSARISGDTSSEEER-------FMKPKVTMIAWNQDDST 440
Query: 412 FVTGSSDTFARVWSA 426
VT +D +VWS+
Sbjct: 441 VVTAVNDHVLKVWSS 455
Score = 80 (33.2 bits), Expect = 5.9e-20, Sum P(5) = 5.9e-20
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 258 VITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS-NNTLVASASNDFVIRVWRLPD 316
V+T +D ++K+WS T L + GH ++ L ++ ++ SA +D I +W +
Sbjct: 441 VVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITK 500
Query: 317 GLPI----SVLRGHT-GAVTAIAFS 336
G+ + +++ G GAV FS
Sbjct: 501 GIKMKHYFNMIEGQGHGAVFDCKFS 525
Score = 79 (32.9 bits), Expect = 5.5e-21, Sum P(6) = 5.5e-21
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
DC + +W+ +G L+ +L GHSA + V+ N IA AG + I VW + P+
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIA--AGSCDKIIRVWCLRTCAPVA 264
Query: 625 IYEIGRFKLVDGKFSP 640
+ + + +FSP
Sbjct: 265 VLQGHTGSITSLQFSP 280
Score = 74 (31.1 bits), Expect = 7.3e-75, Sum P(6) = 7.3e-75
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRD 1706
+P LY IR+RLVN +YR L A ++ + NA ++ + ++ +++ D
Sbjct: 1204 YPTDLY--TIRMRLVNRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITD 1256
Score = 74 (31.1 bits), Expect = 7.3e-75, Sum P(6) = 7.3e-75
Identities = 23/75 (30%), Positives = 33/75 (44%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGISFPLS 110
E+YFLI +LS+GPC+R P+R W GN+++ S
Sbjct: 17 ELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGNEHNR------S 62
Query: 111 YNKLVERYPHIEWDH 125
Y +LV H+ DH
Sbjct: 63 YEELVLSNKHVAPDH 77
Score = 64 (27.6 bits), Expect = 1.6e-19, Sum P(6) = 1.6e-19
Identities = 34/124 (27%), Positives = 48/124 (38%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF--NP-RIAMSAGYDGRT 612
+N + A D I VW + V L GH+ S L P P R +S G DG
Sbjct: 239 ENTLIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTV 298
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQ 672
W W+ ++ + K + K P + S VG ++L TG D
Sbjct: 299 CFWQ-WDLESLK-FSPRPLKFTE-KPRPGVQMLCSSFSVGGMFLA-TGS----TDHVIRM 350
Query: 673 FFLG 676
+FLG
Sbjct: 351 YFLG 354
Score = 61 (26.5 bits), Expect = 2.2e-53, Sum P(8) = 2.2e-53
Identities = 72/338 (21%), Positives = 121/338 (35%)
Query: 987 SLEDTRVKGDDMAKLPQSSSGPPQGTTERKIDLSLKEPGSSSAGSGI---DVGLSQKHNR 1043
S ED+R G D P S+ P + + D S+ E S S + + L +K
Sbjct: 1752 SEEDSRCHGSDHG--PSSTGDPSTSGQKLRAD-SISEEADSEPESSVLCKNTHLCKKAKI 1808
Query: 1044 IVFADGSQDEKYDSQLEESAGD-MENKTRWAEVKIRT-SKRSSSSGVLLPPDANFDVHND 1101
+ ++ +++ + + E G + R A + + S R S + V D V
Sbjct: 1809 LSDSEDCEEKCGERRGPEVEGSPVSEALREAILAPQCLSHRGSETDV--DSDGGA-VREK 1865
Query: 1102 SIGDVNRCVKLENGHG-----KFSSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEEL 1156
S + N V LENG K SS+ E++ V S K++ + ASV +++
Sbjct: 1866 SYSNENGSVSLENGQRRKVSRKSSSDKESNLQ--VTQKSPKDRSSPSRITQRASVATDKM 1923
Query: 1157 ARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELK----ENPPLRVRIRTKG 1212
D + S S ++ + T E K E P + R K
Sbjct: 1924 KLTSDAE-DLSLESVCTRSKRRRKKPARFACTPAKTALSSEEKHAHCEVPEAQPACRNKL 1982
Query: 1213 ILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESSLCMEGNLMSEVPEEAEGYGRSSSDQL 1272
+ + +E S + DL S +S ++ M V +SSS L
Sbjct: 1983 PEPEHQDSAENPSQAASADLNSGGGSSFEQRKS---IQSRQMGAVCVRPPPKTQSSSAGL 2039
Query: 1273 LNSNLKFKVRDGSKS--SYKTRTDIEAFDGGMEDGINH 1308
N + + D S S T + E+ +N+
Sbjct: 2040 SQENARSQTLDSETSLPSESVLTQKATVESNFEEELNY 2077
Score = 61 (26.5 bits), Expect = 5.8e-44, Sum P(6) = 5.8e-44
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 228 SAEISDMAVNYENTLIAAGSCDKIIRVW--CLRTCA----PVA---VLQGHTGSITSLQF 278
Query: 457 SGCA 460
S A
Sbjct: 279 SPMA 282
Score = 59 (25.8 bits), Expect = 1.4e-57, Sum P(6) = 1.4e-57
Identities = 53/218 (24%), Positives = 86/218 (39%)
Query: 1251 GNLMSEVP-EEAEGYGRSSSDQLLNSNLKFKVRDGSKSSYKTRTDIEAFDGGMEDGINHE 1309
G++ E +++EG S D+ N R GS S + + + D + GIN
Sbjct: 824 GSVRHETSYDQSEGSCSSEDDEWRNDR-----RSGSDSDSSSDSSSQYSDWTADTGIN-- 876
Query: 1310 ASGIDSPEAASGSIRKTR-------SMKMKIISREPIAANCNFKSKNGHDLVGTSKTVGN 1362
+ P S R TR M M+ IS +SK + +
Sbjct: 877 ---LQPPLRMSCRRRVTRFCSTSEDEMSMENISPPKRRRKRRKESKPKRESLRRMTPAEL 933
Query: 1363 SSMEAHDEFFPEEWIPTSTVKSRPRSTRNRRGDHDGHPCLLSGRKSNFP-VRKLSWLMLS 1421
++ME EF P WI +T++ P + GD + G ++ VR+ + L+
Sbjct: 934 ANMEHLYEFHPPVWITDTTLRKSPFVPQ--MGDEVMY--FRQGHEAYIEAVRRNNIYELN 989
Query: 1422 EHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQ-EVGP 1458
H+E +R + L D QE ++ G + EVGP
Sbjct: 990 PHKEPWRKM-DLRD---------QELVKIVGLRYEVGP 1017
Score = 57 (25.1 bits), Expect = 1.5e-43, Sum P(6) = 1.5e-43
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ G TGS D ++WS
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 56 (24.8 bits), Expect = 5.3e-73, Sum P(6) = 5.3e-73
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ +R L NY +E KD I ++ SNA++Y K + + + RL
Sbjct: 1351 DYRDIIDTPMDFGTVRETLEAGNYDSPVEFCKD-IRLIFSNAKAYTPNKRSKIYSMTLRL 1409
Query: 1705 RDWFNRTLNKL 1715
F + K+
Sbjct: 1410 SALFEEKMKKI 1420
Score = 50 (22.7 bits), Expect = 1.4e-53, Sum P(6) = 1.4e-53
Identities = 18/75 (24%), Positives = 27/75 (36%)
Query: 783 EVISDDNDSEYNIAEECASEAEQGRDSEVEXXXXXXXXXXXXXXXXAEVELKTSSGRRVR 842
+++SD D E E E E SE +V+ S G VR
Sbjct: 1807 KILSDSEDCEEKCGERRGPEVEGSPVSEALREAILAPQCLSHRGSETDVD---SDGGAVR 1863
Query: 843 KRNLDERDGSASGSN 857
+++ +GS S N
Sbjct: 1864 EKSYSNENGSVSLEN 1878
Score = 49 (22.3 bits), Expect = 3.8e-57, Sum P(5) = 3.8e-57
Identities = 17/78 (21%), Positives = 29/78 (37%)
Query: 716 EEPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDP 775
+EPYQ Y + W + + D D PP E+L + + ++
Sbjct: 1090 QEPYQPQYPDSHFQCYIVRWDNTETEKLSPWDMEPIPDNVDPP-EELGASISVTSDELEK 1148
Query: 776 VYWEP-ENEVISDDNDSE 792
+ ++P E E D E
Sbjct: 1149 LLYKPQEGEWGQRSRDEE 1166
Score = 47 (21.6 bits), Expect = 1.4e-52, Sum P(7) = 1.4e-52
Identities = 38/134 (28%), Positives = 47/134 (35%)
Query: 1001 LPQSSSGPPQGTTERKIDLSLKEPGSSSAGSGIDVGLSQKH----NRI------VFADGS 1050
+PQ PP +T K+ LS S+ SG G S R+ V GS
Sbjct: 1471 IPQLMC-PPSQSTSSKVPLSATRKTSAGVSSGFTSGDSSDSAGSLERVRRQRPEVLRSGS 1529
Query: 1051 Q---DEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSS--SGVLLPPDANFDVHNDSIGD 1105
E D S+ N + E K R SS SGVL +N V
Sbjct: 1530 VLFGSEMEDFLATSSSSSASNSSE--ESKASPGARESSLRSGVLR--GSNLGVTRTRAAR 1585
Query: 1106 VNR-CVKLENGHGK 1118
V LENG G+
Sbjct: 1586 RKAGSVSLENGCGR 1599
Score = 42 (19.8 bits), Expect = 7.3e-75, Sum P(6) = 7.3e-75
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 989 EDTR--VKGDDMAK-LPQSSSGPPQGTTERKIDLSLKEPGSSSAG-SGIDVGLSQKH 1041
+D R V D A LP S G P+ + R++ L ++ P + SG G+ Q H
Sbjct: 666 QDQRLGVDQDGTANGLP-SGEGTPRRGSFRRLSLDIQSPPNIGLRRSGQVEGVRQMH 721
Score = 42 (19.8 bits), Expect = 5.9e-20, Sum P(5) = 5.9e-20
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 337 PRPSAIYQLLSSSDDGTCRIWDARYSQYSPR 367
P+ S L+S S TCR +Y+ YS R
Sbjct: 782 PQKSNSMVLVSQSRQRTCR---RKYANYSRR 809
Score = 39 (18.8 bits), Expect = 5.3e-54, Sum P(6) = 5.3e-54
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 1465 YISAVETCKVVNLVYA 1480
Y S VE CK + L+++
Sbjct: 1374 YDSPVEFCKDIRLIFS 1389
Score = 39 (18.8 bits), Expect = 2.2e-53, Sum P(8) = 2.2e-53
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 919 LQDSHVQSKEDDRNLQN 935
L DS S E D NL+N
Sbjct: 1608 LSDSDNNSVETDENLKN 1624
Score = 38 (18.4 bits), Expect = 1.4e-52, Sum P(7) = 1.4e-52
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 1121 SNSETSCYGCVRSCSDKEKFGSDALLDLASVRKE 1154
++S+ C ++ K++ G +L SVRK+
Sbjct: 2151 TDSDVDCTDNTQTQRKKKRKGKARVLSKESVRKD 2184
Score = 37 (18.1 bits), Expect = 2.4e-74, Sum P(6) = 2.4e-74
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 919 LQDSHVQSKEDDRNLQNMQQQHK 941
L+D ++ E++RNL + ++ K
Sbjct: 755 LEDIRIERGEEERNLYVIGRKKK 777
Score = 37 (18.1 bits), Expect = 3.3e-54, Sum P(6) = 3.3e-54
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 834 KTSSGRRVRKRNLDERDGSASG 855
KTSSGRR + N R ASG
Sbjct: 1295 KTSSGRR-KVHNWKRRS-RASG 1314
Score = 37 (18.1 bits), Expect = 1.4e-53, Sum P(6) = 1.4e-53
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 1311 SGIDSPEAASGSIRKTRSMKMKIISREPI 1339
S +D + +K R K +++S+E +
Sbjct: 2153 SDVDCTDNTQTQRKKKRKGKARVLSKESV 2181
>UNIPROTKB|Q9NSI6 [details] [associations]
symbol:BRWD1 "Bromodomain and WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003674
"molecular_function" evidence=ND] [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006357
GO:GO:0006351 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 EMBL:AJ238214 EMBL:AJ292465 EMBL:AJ292466
EMBL:AB080586 EMBL:AB080587 EMBL:AF064861 EMBL:AF129408
EMBL:BC064602 EMBL:AL163279 EMBL:AJ222636 EMBL:AK002177
IPI:IPI00250716 IPI:IPI00289944 IPI:IPI00746752
RefSeq:NP_001007247.1 RefSeq:NP_061836.2 RefSeq:NP_387505.1
UniGene:Hs.627139 UniGene:Hs.654740 PDB:3Q2E PDBsum:3Q2E
ProteinModelPortal:Q9NSI6 SMR:Q9NSI6 IntAct:Q9NSI6 STRING:Q9NSI6
DMDM:97535778 PaxDb:Q9NSI6 PRIDE:Q9NSI6 Ensembl:ENST00000333229
Ensembl:ENST00000341322 Ensembl:ENST00000342449
Ensembl:ENST00000380800 GeneID:54014 KEGG:hsa:54014 UCSC:uc002yxk.2
UCSC:uc021wjf.1 CTD:54014 GeneCards:GC21M040556 HGNC:HGNC:12760
HPA:HPA030945 neXtProt:NX_Q9NSI6 PharmGKB:PA134906879
HOVERGEN:HBG080933 InParanoid:Q9NSI6 KO:K11798 OMA:NDNGERS
OrthoDB:EOG470TGD PhylomeDB:Q9NSI6 ChiTaRS:BRWD1
EvolutionaryTrace:Q9NSI6 GenomeRNAi:54014 NextBio:56274
ArrayExpress:Q9NSI6 Bgee:Q9NSI6 CleanEx:HS_BRWD1
Genevestigator:Q9NSI6 GermOnline:ENSG00000185658 Uniprot:Q9NSI6
Length = 2320
Score = 354 (129.7 bits), Expect = 2.4e-74, Sum P(7) = 2.4e-74
Identities = 106/322 (32%), Positives = 160/322 (49%)
Query: 110 SYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGSFSLLEC 169
SY +LV H+ DH + P + I P+ + V +LLG+G SLL
Sbjct: 62 SYEELVLSNKHVAPDHLLQICQ-----RIGPMLDK--EIPPSISRVTSLLGAGRQSLLRT 114
Query: 170 DRSMKYKQVKPLP-AYL---RWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACYAIAK 225
+ ++ K A L R P M + +L EI G + + CS ++ A
Sbjct: 115 AKDCRHTVWKGSAFAALHRGRPPEMPVNYGSPPNLVEIHRG-----KQLTGCST-FSTAF 168
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
P TM Q ++ +++ GH AVYC FDR+G + TGSDD LVKIWS L++ RGH
Sbjct: 169 PGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHS 228
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ- 344
+I+D+AV+ NT++A+ S D +IRVW L P++VL+GHTG++T++ FSP +
Sbjct: 229 AEISDMAVNYENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRY 288
Query: 345 LLSSSDDGTCRIW--DARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILC 402
++S+ DGT W D ++SPR P T K Q+LC
Sbjct: 289 MVSTGADGTVCFWQWDLESLKFSPR------PLKFTEKPRPGV-------------QMLC 329
Query: 403 CAYNANGTVFVTGSSDTFARVW 424
+++ G TGS+D R++
Sbjct: 330 SSFSVGGMFLATGSTDHVIRMY 351
Score = 311 (114.5 bits), Expect = 2.4e-74, Sum P(7) = 2.4e-74
Identities = 87/266 (32%), Positives = 126/266 (47%)
Query: 473 EENVPKFKNSWFCH--DNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXX 530
E + K + FC+ D ++ SRDG+A IW R + W R+ L +
Sbjct: 365 ESHTDKVDSIQFCNNGDRFLSGSRDGTARIW--RFEQLE-----W-RSILLDMATRISGD 416
Query: 531 XXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASS 590
V MI W+ ++ V+ A+ D + VWN+ G L+H+L GH+
Sbjct: 417 LSSEEERFMKPK-----VTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLMGHADEV 471
Query: 591 YVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSI 645
+VL+ HPF+ RI +SAG+DG +WDI +GT ++ Y I G + D KFS DG
Sbjct: 472 FVLETHPFDSRIMLSAGHDGSIFIWDITKGTKMKHYFNMIEGQGHGAVFDCKFSQDGQHF 531
Query: 646 VLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQD 705
+D G + + G + + FF DYRPLIRDS VLD++TQ PH +
Sbjct: 532 ACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHL--MPP 589
Query: 706 P-LCDSSMIPYEEPYQSMYQQRRLGA 730
P L D P+ YQ + R A
Sbjct: 590 PFLVDVDGNPHPTKYQRLVPGRENSA 615
Score = 227 (85.0 bits), Expect = 2.4e-74, Sum P(7) = 2.4e-74
Identities = 60/239 (25%), Positives = 112/239 (46%)
Query: 1367 AHDEFFPEEWIPTSTVKSRPRSTRNRRGD-HDGHPCLLSGRKSNFPVRKLSWLMLSEHEE 1425
+ DE E P + R + + ++ + P L+ + + W+ + +
Sbjct: 895 SEDEISTENLSPPKRRRKRKKENKPKKENLRRMTPAELANMEHLYEFHPPVWITDTTLRK 954
Query: 1426 GYRYIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLV 1478
++PQ+GDEVIY RQGH+ +IE+ + PW ++ + E K+V +
Sbjct: 955 S-PFVPQMGDEVIYFRQGHEAYIEAVRRNNIYELNPNKEPWRKMD--LRDQELVKIVGIR 1011
Query: 1479 YATFPGSGDSCCKITLKFVDPSSS-VLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWT 1537
Y P + CC + L F+DP++ ++ K+F + ++ D DF+V + YD A RNW
Sbjct: 1012 YEVGPPT--LCC-LKLAFIDPATGKLMDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQ 1068
Query: 1538 HRDKCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEM 1596
D+ +R+ + WW G + + ++P+S + Y+V + + SPW+M
Sbjct: 1069 SCDR----FRSIIDDA--WWFGTVLSQEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDM 1121
Score = 124 (48.7 bits), Expect = 1.9e-23, Sum P(6) = 1.9e-23
Identities = 41/141 (29%), Positives = 62/141 (43%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGD-- 287
+ I +L H D V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWRSILLDMATRISGDLS 418
Query: 288 ----------ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
+T +A + N+++V +A ND V++VW G + L GH V + P
Sbjct: 419 SEEERFMKPKVTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLMGHADEVFVLETHP 478
Query: 338 RPSAIYQLLSSSDDGTCRIWD 358
S I +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 107 (42.7 bits), Expect = 9.2e-22, Sum P(6) = 9.2e-22
Identities = 39/135 (28%), Positives = 57/135 (42%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S +A+ S D VIR++ L P I+ L HT V +I F + LS S D
Sbjct: 333 SVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGD---RFLSGSRD 389
Query: 352 GTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTV 411
GT RIW R+ Q R L I+G ++ A+N N ++
Sbjct: 390 GTARIW--RFEQLEWRSILLDMATRISGDLSSEEER-------FMKPKVTMIAWNQNDSI 440
Query: 412 FVTGSSDTFARVWSA 426
VT +D +VW++
Sbjct: 441 VVTAVNDHVLKVWNS 455
Score = 80 (33.2 bits), Expect = 2.1e-20, Sum P(7) = 2.1e-20
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
DC + +W+ +G L+ +L GHSA + V+ N IA AG + I VW + P+
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIA--AGSCDKIIRVWCLRTCAPVA 264
Query: 625 IYEIGRFKLVDGKFSP 640
+ + + +FSP
Sbjct: 265 VLQGHTGSITSLQFSP 280
Score = 75 (31.5 bits), Expect = 2.4e-74, Sum P(7) = 2.4e-74
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRD 1706
+P LY IR+RLVN +YR L A ++ + NA ++ + ++ +++ D
Sbjct: 1203 YPTDLY--TIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKITD 1255
Score = 74 (31.1 bits), Expect = 2.4e-74, Sum P(7) = 2.4e-74
Identities = 23/75 (30%), Positives = 33/75 (44%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGISFPLS 110
E+YFLI +LS+GPC+R P+R W GN+++ S
Sbjct: 17 ELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGNEHNR------S 62
Query: 111 YNKLVERYPHIEWDH 125
Y +LV H+ DH
Sbjct: 63 YEELVLSNKHVAPDH 77
Score = 71 (30.1 bits), Expect = 7.9e-58, Sum P(5) = 7.9e-58
Identities = 80/387 (20%), Positives = 142/387 (36%)
Query: 987 SLEDTRVKGDDMAKLPQSSSGPPQGTTERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIVF 1046
S ED++ D A ++GP + K + S+ E S G + H F
Sbjct: 1756 SEEDSKSHDSDHAC--NRTAGPSTSVQKLKAE-SISEEADSEPGRSGGRKYNTFHKNASF 1812
Query: 1047 ADGSQ--DEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIG 1104
++ + DS+ EE + + K E+ + + + ++ D
Sbjct: 1813 FKKTKILSDSEDSESEEQDRE-DGKCHKMEMNPISGNLNCDPIAMSQCSSDHGCETDLDS 1871
Query: 1105 DVNRCVKLENGHGKFSSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKK 1164
D ++ K N F +S + G R S K SD+ L V+K AR ++
Sbjct: 1872 DDDKIEKPNN----FMKDSASQDNGLSRKISRKRVCSSDSDSSLQVVKKSSKARTGLLRI 1927
Query: 1165 SSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQK 1224
+ +T + DV E+V T ++ K+ PL + T K S+ +
Sbjct: 1928 TRRCAATAANKIKLMSDVEDVSLENVHTRSKNGRKK--PLHLACTTA-----KKKLSDCE 1980
Query: 1225 SSTSVKDLPSAE--SDPIPMSESSLCMEGNLMSEVPEEAEGYGRSSSDQLLNSNLKFKVR 1282
S ++PS + + P S EG+ ++V +A G S S+ +LNS K +
Sbjct: 1981 GSVHC-EVPSEQYACEGKPPDPDS---EGS--TKVLSQALN-GDSDSEDMLNSEHKHRHT 2033
Query: 1283 DGSKSSYKTRTDIEAFDGGMEDGINHEASGIDSPEAASGSIRKTRSMKMKIISREPIAAN 1342
+ K ++ + ED +H G ++ S T + K + + N
Sbjct: 2034 NIHKIDAPSKRKSSSVTSSGEDSKSH-IPGSETDRTFSSE--STLAQKATAENNFEVELN 2090
Query: 1343 CNFKSKNGHDLVGTSKTVGNSSMEAHD 1369
+ NG L K + + HD
Sbjct: 2091 YGLRRWNGRRLRTYGKAPFSKTKVIHD 2117
Score = 66 (28.3 bits), Expect = 9.3e-45, Sum P(7) = 9.3e-45
Identities = 23/71 (32%), Positives = 30/71 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 228 SAEISDMAVNYENTMIAAGSCDKIIRVW--CLRTCA----PVA---VLQGHTGSITSLQF 278
Query: 457 SGCAVASRSAM 467
S A S+ M
Sbjct: 279 SPMAKGSQRYM 289
Score = 65 (27.9 bits), Expect = 6.1e-19, Sum P(7) = 6.1e-19
Identities = 34/128 (26%), Positives = 49/128 (38%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF---NPRIAMSAGYDGRT 612
+N + A D I VW + V L GH+ S L P + R +S G DG
Sbjct: 239 ENTMIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTV 298
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQ 672
W W+ ++ + K + K P + S VG ++L TG D
Sbjct: 299 CFWQ-WDLESLK-FSPRPLKFTE-KPRPGVQMLCSSFSVGGMFLA-TGS----TDHVIRM 350
Query: 673 FFLGDYRP 680
+FLG P
Sbjct: 351 YFLGFEAP 358
Score = 59 (25.8 bits), Expect = 1.1e-72, Sum P(7) = 1.1e-72
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ +R L NY LE KD I ++ SNA++Y K + + + RL
Sbjct: 1349 DYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKD-IRLIFSNAKAYTPNKRSKIYSMTLRL 1407
Query: 1705 RDWFNRTLNKL 1715
F + K+
Sbjct: 1408 SALFEEKMKKI 1418
Score = 58 (25.5 bits), Expect = 1.7e-56, Sum P(5) = 1.7e-56
Identities = 97/418 (23%), Positives = 164/418 (39%)
Query: 928 EDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKKALS 987
+ +++++N++ KR + QT + E +G P +QS T +R L HK +
Sbjct: 1449 QPNKSIRNLKP--KRLKSQTKIIPELVGSP-----TQS-TSSRTAY-----LGTHKTSAG 1495
Query: 988 LEDTRVKGD--DMAKLPQ--SSSGP-PQGTT--ERKIDLSLKEPGSSSAGSGIDVGLSQK 1040
+ GD D A+ + + P G+T E +++ SL SSSA S + S++
Sbjct: 1496 ISSGVTSGDSSDSAESSERRKRNRPITNGSTLSESEVEDSLATSLSSSASSSSEE--SKE 1553
Query: 1041 HNRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANF--DV 1098
+R +++ S L S+ +TR A+ K ++ G + D
Sbjct: 1554 SSR------ARESSSRSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATRKRVYLSDS 1607
Query: 1099 HNDSIGDVNRCVKLENGHG-KFSSNSETSCYGCVRSCSD-KEKFGSDALLD--------- 1147
N+S+ + +K G+ K ++ SD +E S+++
Sbjct: 1608 DNNSL-ETGEILKARAGNNRKVLRKCAAVAANKIKLMSDVEENSSSESVCSGRKLPHRNA 1666
Query: 1148 LASVRKEELARHEDIKK-SSSFNSTPLVDHQQNDDVHKSR----NEDVGTNYRDELKENP 1202
A RK+ L ED + S L D Q V S N D N RD E+
Sbjct: 1667 SAVARKKLLHNSEDEQSLKSEIEEEELKDENQLLPVSSSHTAQSNVDESEN-RDSESESD 1725
Query: 1203 PLRVRIRT---KGILRDTKSPSEQKS---STSVKDLPSAESDPI--PMSESSLCMEGNLM 1254
LRV + G T +PS+ K +S +D S +SD + S ++
Sbjct: 1726 -LRVARKNWHANGYKSHTPAPSKTKFLKIESSEEDSKSHDSDHACNRTAGPSTSVQKLKA 1784
Query: 1255 SEVPEEAEGY-GRSSSDQL--LNSNLKFKVRDGSKSSYKTRTDIEAFDGGMEDGINHE 1309
+ EEA+ GRS + + N F + S + D E+ + EDG H+
Sbjct: 1785 ESISEEADSEPGRSGGRKYNTFHKNASFFKKTKILSDSE---DSESEEQDREDGKCHK 1839
Score = 57 (25.1 bits), Expect = 7.5e-44, Sum P(7) = 7.5e-44
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ G TGS D ++WS
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 53 (23.7 bits), Expect = 3.1e-58, Sum P(5) = 3.1e-58
Identities = 14/66 (21%), Positives = 27/66 (40%)
Query: 716 EEPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDP 775
+EPYQ Y + W + I+ D D PP E+L + + ++
Sbjct: 1089 QEPYQPQYPDSHFQCYIVRWDNTEIEKLSPWDMEPIPDNVDPP-EELGASISVTTDELEK 1147
Query: 776 VYWEPE 781
+ ++P+
Sbjct: 1148 LLYKPQ 1153
Score = 46 (21.3 bits), Expect = 7.8e-56, Sum P(7) = 7.8e-56
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1363 SSMEAHDEFFPEEWIPTSTVKSRP 1386
++ME EF P WI +T++ P
Sbjct: 933 ANMEHLYEFHPPVWITDTTLRKSP 956
Score = 46 (21.3 bits), Expect = 3.0e-55, Sum P(5) = 3.0e-55
Identities = 28/123 (22%), Positives = 45/123 (36%)
Query: 1305 GINHEASGIDSPEAASGSIRKTRSMKMKIISREPIAANCNFKSKNGHDLVGTS--KTVGN 1362
G + ++GI S + S S + + +R PI D + TS + +
Sbjct: 1488 GTHKTSAGISSGVTSGDSSDSAESSERRKRNR-PITNGSTLSESEVEDSLATSLSSSASS 1546
Query: 1363 SSMEAHDEFFPEEWIPTSTVK--SRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSWLML 1420
SS E+ + E S + S R TR R P L+ RK +L
Sbjct: 1547 SSEESKESSRARESSSRSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATRKRVYLSD 1606
Query: 1421 SEH 1423
S++
Sbjct: 1607 SDN 1609
Score = 45 (20.9 bits), Expect = 2.0e-57, Sum P(5) = 2.0e-57
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 766 MEPVPEFIDPVYWEPENEVISDDNDS-EYNIAEECASE-AEQGRDSEVE 812
MEP+P+ +DP E IS D E + + A E ++ RD E +
Sbjct: 1121 MEPIPDNVDPP--EELGASISVTTDELEKLLYKPQAGEWGQKSRDEECD 1167
Score = 43 (20.2 bits), Expect = 1.3e-52, Sum P(7) = 1.3e-52
Identities = 25/101 (24%), Positives = 46/101 (45%)
Query: 1386 PRSTRNRRGDHDGHPCLLSGR--KSNFP--VRKLSWLMLS-EHEEGYRYIPQLGDEVIYS 1440
P+++ RR HDG + + +SN+ ++L L+ E E +R Q D V Y
Sbjct: 1292 PKTSSGRRRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDSEPFR---QPVDLVEYP 1348
Query: 1441 RQGHQEFIESTGS-QEVGPWWSINGYISAVETCKVVNLVYA 1480
+++ I++ V Y S +E CK + L+++
Sbjct: 1349 --DYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFS 1387
Score = 40 (19.1 bits), Expect = 2.4e-74, Sum P(7) = 2.4e-74
Identities = 30/100 (30%), Positives = 38/100 (38%)
Query: 1120 SSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQN 1179
S N +S SC E GS + S RK E + E SSS S D N
Sbjct: 817 SGNESSSSVRHETSCDQSEGSGSSEEDEWRSDRKSE-SYSESSSDSSSRYSDWTADAGIN 875
Query: 1180 --DDVHKSRNEDVG---TNYRDELK-EN--PPLRVRIRTK 1211
+ S + ++ DE+ EN PP R R R K
Sbjct: 876 LQPPLRTSCRRRITRFCSSSEDEISTENLSPPKRRRKRKK 915
Score = 39 (18.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 5/25 (20%), Positives = 15/25 (60%)
Query: 356 IWDARYSQYSPRIYLPKPPDAITGK 380
+W+ RY +++ R + P+++ +
Sbjct: 1226 VWEVRYIEHNARTF--NEPESVIAR 1248
Score = 38 (18.4 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1233 PSAESDPIPMSESSL 1247
PS+ P+P+ ES L
Sbjct: 4 PSSARRPVPLIESEL 18
Score = 37 (18.1 bits), Expect = 2.4e-74, Sum P(7) = 2.4e-74
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 919 LQDSHVQSKEDDRNLQNMQQQHK 941
L+D ++ E++RNL + ++ K
Sbjct: 754 LEDFRLEKGEEERNLYIIGRKRK 776
>UNIPROTKB|Q8WWQ0 [details] [associations]
symbol:PHIP "PH-interacting protein" species:9606 "Homo
sapiens" [GO:0006606 "protein import into nucleus" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0033138 "positive regulation of
peptidyl-serine phosphorylation" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005158 "insulin receptor binding" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008286 "insulin
receptor signaling pathway" evidence=NAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0001932 "regulation of
protein phosphorylation" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0043568 "positive regulation of insulin-like growth factor
receptor signaling pathway" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=IMP] [GO:0045840 "positive regulation of
mitosis" evidence=ISS] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005634 GO:GO:0008286
GO:GO:0045893 GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 EMBL:CH471051
eggNOG:COG2319 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0045840
GO:GO:0001932 GO:GO:0033138 GO:GO:0043568 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 HOVERGEN:HBG108248 GO:GO:0005158 EMBL:AL450327
EMBL:AJ303102 EMBL:AL356776 EMBL:BC008909 EMBL:BC021905
EMBL:BC081569 EMBL:BC137488 EMBL:AK057039 EMBL:AK075124
EMBL:AL161957 EMBL:AF310250 IPI:IPI00291916 RefSeq:NP_060404.3
UniGene:Hs.511817 UniGene:Hs.606356 PDB:3MB3 PDBsum:3MB3
ProteinModelPortal:Q8WWQ0 SMR:Q8WWQ0 IntAct:Q8WWQ0
MINT:MINT-1422606 STRING:Q8WWQ0 PhosphoSite:Q8WWQ0 DMDM:308153472
PaxDb:Q8WWQ0 PRIDE:Q8WWQ0 Ensembl:ENST00000275034 GeneID:55023
KEGG:hsa:55023 UCSC:uc011dyp.2 CTD:55023 GeneCards:GC06M079644
H-InvDB:HIX0032894 HGNC:HGNC:15673 MIM:612870 neXtProt:NX_Q8WWQ0
PharmGKB:PA33265 InParanoid:Q8WWQ0 KO:K11797 OMA:PGTIQVN
OrthoDB:EOG41ZF90 ChiTaRS:PHIP EvolutionaryTrace:Q8WWQ0
GenomeRNAi:55023 NextBio:58406 ArrayExpress:Q8WWQ0 Bgee:Q8WWQ0
CleanEx:HS_PHIP Genevestigator:Q8WWQ0 Uniprot:Q8WWQ0
Length = 1821
Score = 345 (126.5 bits), Expect = 2.3e-73, Sum P(7) = 2.3e-73
Identities = 106/327 (32%), Positives = 161/327 (49%)
Query: 104 GISFPLSYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGS 163
G P +Y LV+ Y H+ DH ++ P + I + V TLLG+G
Sbjct: 53 GKEHPRTYQNLVKYYRHLAPDHLLQIC-----HRLGPLLEQ--EIPQSVPGVQTLLGAGR 105
Query: 164 FSLLECDRSMKYKQVKPLP-AYLRWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACYA 222
SLL ++S K+ K A L V+ S I + Y
Sbjct: 106 QSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIADTLFSRK-----LNGKYR 160
Query: 223 IAK--PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLAS 280
+ + P+ + Q M+ K++ GH +VYC FDR+GR + TGSDD LVKIW+ + LA+
Sbjct: 161 LERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLAT 220
Query: 281 CRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPS 340
RGH +I+D+AV+ NT++A+ S D +IRVW L P++VL+GH+ ++T++ FSP S
Sbjct: 221 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCS 280
Query: 341 AIYQLLSSSD-DGT-CR-IWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQS 397
+ LSS+ DGT C +WDA + +PR P T +
Sbjct: 281 GSKRYLSSTGADGTICFWLWDAGTLKINPR------PAKFTERPRPGV------------ 322
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVW 424
Q++C +++A G TGS+D RV+
Sbjct: 323 -QMICSSFSAGGMFLATGSTDHIIRVY 348
Score = 313 (115.2 bits), Expect = 2.3e-73, Sum P(7) = 2.3e-73
Identities = 77/187 (41%), Positives = 100/187 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN+ G L+H L GH +VL+ HPF+PR+ SAG
Sbjct: 427 VTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAG 486
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG IVWD+ G IR Y I G + D K SPDG +D G +LL G G
Sbjct: 487 HDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHG--HLLIFGFG 544
Query: 663 ESQK-DAKYDQ-FFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPY 719
S K D DQ FF DYRPLIRD+ VLD++TQ PH + P L D P+ Y
Sbjct: 545 SSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHL--MPPPFLVDVDGNPHPSRY 602
Query: 720 QSMYQQR 726
Q + R
Sbjct: 603 QRLVPGR 609
Score = 211 (79.3 bits), Expect = 2.3e-73, Sum P(7) = 2.3e-73
Identities = 55/181 (30%), Positives = 88/181 (48%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDEV Y RQGH+ ++E ++ PW + + E K+V + Y
Sbjct: 956 FVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPWHKME--LREQELMKIVGIKYEV 1013
Query: 1482 FPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
G CC + L F+DP + L G +F + ++ D DF+V + +D A R W D
Sbjct: 1014 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGD 1070
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMH-DP 1599
+ +R+ + WW G I + E+P+S + Y V + GD+ SPW+M P
Sbjct: 1071 R----FRSVIDDA--WWFGTIESQEPLQLEYPDSLFQCYNVCWDNGDTEKMSPWDMELIP 1124
Query: 1600 N 1600
N
Sbjct: 1125 N 1125
Score = 97 (39.2 bits), Expect = 8.0e-48, Sum P(6) = 8.0e-48
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S+ +A+ S D +IRV+ G P IS L HT V +I FS + + +S S D
Sbjct: 330 SAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSN---RFVSGSRD 386
Query: 352 GTCRIWDARYSQY 364
GT RIW + ++
Sbjct: 387 GTARIWQFKRREW 399
Score = 87 (35.7 bits), Expect = 2.9e-19, Sum P(5) = 2.9e-19
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A ++ V +A N+ ++VW G I VL GH V + P P L S
Sbjct: 427 VTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVL--EPHPFDPRVLFS 484
Query: 348 SSDDGTCRIWD 358
+ DG +WD
Sbjct: 485 AGHDGNVIVWD 495
Score = 84 (34.6 bits), Expect = 2.3e-73, Sum P(7) = 2.3e-73
Identities = 26/79 (32%), Positives = 35/79 (44%)
Query: 48 DLR-EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGIS 106
+LR E+YFLI FL GPCQ+ PRR W +G ++
Sbjct: 10 ELRSELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTD-W-------TGKEH----- 56
Query: 107 FPLSYNKLVERYPHIEWDH 125
P +Y LV+ Y H+ DH
Sbjct: 57 -PRTYQNLVKYYRHLAPDH 74
Score = 80 (33.2 bits), Expect = 1.4e-18, Sum P(5) = 1.4e-18
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GH+A + V+ N IA +
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA-AGS 244
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSP 640
D VW + P+ + + + +FSP
Sbjct: 245 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSP 277
Score = 75 (31.5 bits), Expect = 1.4e-45, Sum P(6) = 1.4e-45
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAVSSNNTLVASASN 305
C+ F G F+ TGS D +++++ + ++ H + + S+ + S S
Sbjct: 326 CSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSR 385
Query: 306 DFVIRVWR 313
D R+W+
Sbjct: 386 DGTARIWQ 393
Score = 75 (31.5 bits), Expect = 4.5e-18, Sum P(5) = 4.5e-18
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q +Q I+ + + V +DR VIT ++ +K+W+ T + GHE ++
Sbjct: 413 QNLQGIED-KITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFV 471
Query: 291 LAVSSNNTLVA-SASNDFVIRVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
L + V SA +D + VW L G+ I +++ G GAV SP
Sbjct: 472 LEPHPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSP 524
Score = 64 (27.6 bits), Expect = 1.8e-44, Sum P(6) = 1.8e-44
Identities = 24/76 (31%), Positives = 32/76 (42%)
Query: 395 LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H +I A N T+ GS D RVW C + P L VL GH +
Sbjct: 221 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVW--CLRTCA----P---LAVLQGHSASIT 271
Query: 453 YVQFSGCAVASRSAMS 468
+QFS S+ +S
Sbjct: 272 SLQFSPLCSGSKRYLS 287
Score = 52 (23.4 bits), Expect = 2.3e-73, Sum P(7) = 2.3e-73
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYF-IKNAALSAKVERL 1704
DY + P+ +R L NY +E KD + ++ SN+++Y K + + + RL
Sbjct: 1352 DYRDIIDTPMDFATVRETLEAGNYESPMELCKD-VRLIFSNSKAYTPSKRSRIYSMSLRL 1410
Query: 1705 RDWFNRTLNKL 1715
+F ++ +
Sbjct: 1411 SAFFEEHISSV 1421
Score = 51 (23.0 bits), Expect = 3.9e-43, Sum P(6) = 3.9e-43
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C ++ G TGS D ++W+
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWA 211
Score = 50 (22.7 bits), Expect = 2.3e-73, Sum P(7) = 2.3e-73
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 1147 DLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRV 1206
++ + R EE +H + K N P V + H+ D+G + + + ++
Sbjct: 747 EIKTYRSEEKRKHLTVPKE---NKIPTVS---KNHAHE-HFLDLGESKKQQTNQH----- 794
Query: 1207 RIRTKGILRDTKSPSEQ-KSSTSVKD 1231
RT+ L +T PSE+ ++ +S D
Sbjct: 795 NYRTRSALEETPRPSEEIENGSSSSD 820
Score = 49 (22.3 bits), Expect = 1.1e-55, Sum P(7) = 1.1e-55
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 1170 STPLVDHQQNDDVHKSRNEDVGTNYRDE 1197
S PL D + ++K + + GTN RDE
Sbjct: 1136 SVPLTDGECRSLIYKPLDGEWGTNPRDE 1163
Score = 45 (20.9 bits), Expect = 2.3e-73, Sum P(7) = 2.3e-73
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 412 FVTGSSDTFARVW 424
FV+GS D AR+W
Sbjct: 380 FVSGSRDGTARIW 392
Score = 41 (19.5 bits), Expect = 4.3e-54, Sum P(6) = 4.3e-54
Identities = 19/83 (22%), Positives = 33/83 (39%)
Query: 989 EDTRVKGDDMAKLPQSSSGPPQGTTERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIVFAD 1048
E VK D + K + P + +K+D L P S V + ++ NR D
Sbjct: 1697 ETNNVKEDLLQKKNRGGRKPKRKMKTQKLDADLLVPAS--------VKVLRRSNRKKIDD 1748
Query: 1049 GSQDEKYDSQLEESAGDMENKTR 1071
+E+ +L+ S M + +
Sbjct: 1749 PIDEEEEFEELKGSEPHMRTRNQ 1771
Score = 41 (19.5 bits), Expect = 1.5e-45, Sum P(6) = 1.5e-45
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
++ A++ + +T ++ +VW++ Q IH VL GHE++V
Sbjct: 426 KVTMVAWDRHDNTVITAVNNMTLKVWNSYTG------QLIH---VLMGHEDEV 469
Score = 40 (19.1 bits), Expect = 4.0e-72, Sum P(7) = 4.0e-72
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 1654 VPLYP---EVIRLRLVNNYYRSLEAAKDDINVMLSNAESY 1690
V YP I+ RL N +YR + + ++ + N ++
Sbjct: 1199 VVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTF 1238
Score = 39 (18.8 bits), Expect = 3.1e-72, Sum P(7) = 3.1e-72
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 926 SKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVL 975
S E++ + + Q+Q K+E+++ V E G P+ + + +KRL +
Sbjct: 881 SDEEEESEKQKQKQIKKEKKK--VNEEKDG-PISPKKKKPKERKQKRLAV 927
Score = 39 (18.8 bits), Expect = 3.1e-72, Sum P(7) = 3.1e-72
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 1028 SAGSGIDVGLSQK--HNRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVK 1076
+A +GI++ +K N+ A+ S DE+ +S+ ++ + K + E K
Sbjct: 856 TADAGINLQPPKKVPKNKTKKAESSSDEEEESEKQKQKQIKKEKKKVNEEK 906
Score = 39 (18.8 bits), Expect = 3.3e-55, Sum P(6) = 3.3e-55
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 773 IDPVYWEPENEVISDDNDSE 792
I P+Y + +V+SD D E
Sbjct: 1268 IIPLYNSMKKKVLSDSEDEE 1287
Score = 39 (18.8 bits), Expect = 1.8e-16, Sum P(6) = 1.8e-16
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 331 TAIAFSPRPSA-IYQLLSSSDDG 352
+A+ +PRPS I SSSD+G
Sbjct: 800 SALEETPRPSEEIENGSSSSDEG 822
Score = 38 (18.4 bits), Expect = 2.7e-54, Sum P(7) = 2.7e-54
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 1465 YISAVETCKVVNLVYA 1480
Y S +E CK V L+++
Sbjct: 1375 YESPMELCKDVRLIFS 1390
Score = 37 (18.1 bits), Expect = 3.9e-44, Sum P(7) = 3.9e-44
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 648 SDDVGQIYLLNTGQGESQKDAKYDQFFLGDY 678
S D G++ ++ G E ++ A + DY
Sbjct: 818 SSDEGEVVAVSGGTSEEEERAWHSDGSSSDY 848
>MGI|MGI:1932404 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10090 "Mus musculus" [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008284 "positive
regulation of cell proliferation" evidence=IGI;IMP] [GO:0008286
"insulin receptor signaling pathway" evidence=IDA] [GO:0010800
"positive regulation of peptidyl-threonine phosphorylation"
evidence=IDA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IDA] [GO:0040008 "regulation of growth"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IDA] [GO:0043568 "positive regulation of
insulin-like growth factor receptor signaling pathway"
evidence=IDA] [GO:0045840 "positive regulation of mitosis"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 MGI:MGI:1932404 GO:GO:0005634 GO:GO:0008286
GO:GO:0007010 GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0045944
GO:GO:0010800 GO:GO:0006606 GO:GO:0040008 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0045840 GO:GO:0033138 GO:GO:0043568
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 HOGENOM:HOG000095265 HSSP:P16649
HOVERGEN:HBG108248 OrthoDB:EOG41ZF90 EMBL:AJ303103 EMBL:AB049460
EMBL:BC049950 EMBL:AK162189 EMBL:AF310251 IPI:IPI00311490
UniGene:Mm.221688 ProteinModelPortal:Q8VDD9 SMR:Q8VDD9
IntAct:Q8VDD9 STRING:Q8VDD9 PhosphoSite:Q8VDD9 PaxDb:Q8VDD9
PRIDE:Q8VDD9 UCSC:uc009qvv.1 InParanoid:Q8VDD9 CleanEx:MM_PHIP
Genevestigator:Q8VDD9 Uniprot:Q8VDD9
Length = 1821
Score = 346 (126.9 bits), Expect = 9.4e-73, Sum P(7) = 9.4e-73
Identities = 106/327 (32%), Positives = 161/327 (49%)
Query: 104 GISFPLSYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGS 163
G P +Y LV+ Y H+ DH ++ P + I + V TLLG+G
Sbjct: 53 GKEHPRTYQNLVKYYRHLAPDHLLQIC-----HRLGPLLEQ--EIPQSVPGVQTLLGAGR 105
Query: 164 FSLLECDRSMKYKQVKPLP-AYLRWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACYA 222
SLL ++S K+ K A L V+ S I + Y
Sbjct: 106 QSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIADTLFSRK-----LNGKYR 160
Query: 223 IAK--PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLAS 280
+ + P+ + Q M+ K++ GH +VYC FDR+GR + TGSDD LVKIW+ + LA+
Sbjct: 161 LERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLAT 220
Query: 281 CRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPS 340
RGH +I+D+AV+ NT++A+ S D +IRVW L P++VL+GH+ ++T++ FSP S
Sbjct: 221 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCS 280
Query: 341 AIYQLLSSSD-DGT-CR-IWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQS 397
+ LSS+ DGT C +WDA + +PR P T +
Sbjct: 281 GSKRYLSSTGADGTICFWLWDAGTLKINPR------PTKFTERPRPGV------------ 322
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVW 424
Q++C +++A G TGS+D RV+
Sbjct: 323 -QMICSSFSAGGMFLATGSTDHIIRVY 348
Score = 312 (114.9 bits), Expect = 9.4e-73, Sum P(7) = 9.4e-73
Identities = 76/187 (40%), Positives = 100/187 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN+ G L+H L GH +VL+ HPF+PR+ SAG
Sbjct: 427 VTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAG 486
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG IVWD+ G +R Y I G + D K SPDG +D G +LL G G
Sbjct: 487 HDGNVIVWDLARGVKVRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHG--HLLIFGFG 544
Query: 663 ESQK-DAKYDQ-FFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPY 719
S K D DQ FF DYRPLIRD+ VLD++TQ PH + P L D P+ Y
Sbjct: 545 SSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHL--MPPPFLVDVDGNPHPSRY 602
Query: 720 QSMYQQR 726
Q + R
Sbjct: 603 QRLVPGR 609
Score = 211 (79.3 bits), Expect = 9.4e-73, Sum P(7) = 9.4e-73
Identities = 55/181 (30%), Positives = 88/181 (48%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDEV Y RQGH+ ++E ++ PW + + E K+V + Y
Sbjct: 956 FVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPWHKME--LREQELMKIVGIKYEV 1013
Query: 1482 FPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
G CC + L F+DP + L G +F + ++ D DF+V + +D A R W D
Sbjct: 1014 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRPWNIGD 1070
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMH-DP 1599
+ +R+ + WW G I + E+P+S + Y V + GD+ SPW+M P
Sbjct: 1071 R----FRSVIDDA--WWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIP 1124
Query: 1600 N 1600
N
Sbjct: 1125 N 1125
Score = 97 (39.2 bits), Expect = 4.2e-47, Sum P(6) = 4.2e-47
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S+ +A+ S D +IRV+ G P IS L HT V +I FS + + +S S D
Sbjct: 330 SAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSN---RFVSGSRD 386
Query: 352 GTCRIWDARYSQY 364
GT RIW + ++
Sbjct: 387 GTARIWQFKRREW 399
Score = 87 (35.7 bits), Expect = 3.0e-18, Sum P(6) = 3.0e-18
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A ++ V +A N+ ++VW G I VL GH V + P P L S
Sbjct: 427 VTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVL--EPHPFDPRVLFS 484
Query: 348 SSDDGTCRIWD 358
+ DG +WD
Sbjct: 485 AGHDGNVIVWD 495
Score = 84 (34.6 bits), Expect = 9.4e-73, Sum P(7) = 9.4e-73
Identities = 26/79 (32%), Positives = 35/79 (44%)
Query: 48 DLR-EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGIS 106
+LR E+YFLI FL GPCQ+ PRR W +G ++
Sbjct: 10 ELRSELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTD-W-------TGKEH----- 56
Query: 107 FPLSYNKLVERYPHIEWDH 125
P +Y LV+ Y H+ DH
Sbjct: 57 -PRTYQNLVKYYRHLAPDH 74
Score = 80 (33.2 bits), Expect = 1.5e-17, Sum P(6) = 1.5e-17
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GH+A + V+ N IA +
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA-AGS 244
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSP 640
D VW + P+ + + + +FSP
Sbjct: 245 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSP 277
Score = 75 (31.5 bits), Expect = 7.3e-45, Sum P(6) = 7.3e-45
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAVSSNNTLVASASN 305
C+ F G F+ TGS D +++++ + ++ H + + S+ + S S
Sbjct: 326 CSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSR 385
Query: 306 DFVIRVWR 313
D R+W+
Sbjct: 386 DGTARIWQ 393
Score = 74 (31.1 bits), Expect = 5.7e-17, Sum P(6) = 5.7e-17
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q +Q I+ + + V +DR VIT ++ +K+W+ T + GHE ++
Sbjct: 413 QNLQGIED-KITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFV 471
Query: 291 LAVSSNNTLVA-SASNDFVIRVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
L + V SA +D + VW L G+ + +++ G GAV SP
Sbjct: 472 LEPHPFDPRVLFSAGHDGNVIVWDLARGVKVRSYFNMIEGQGHGAVFDCKCSP 524
Score = 64 (27.6 bits), Expect = 9.7e-44, Sum P(6) = 9.7e-44
Identities = 24/76 (31%), Positives = 32/76 (42%)
Query: 395 LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H +I A N T+ GS D RVW C + P L VL GH +
Sbjct: 221 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVW--CLRTCA----P---LAVLQGHSASIT 271
Query: 453 YVQFSGCAVASRSAMS 468
+QFS S+ +S
Sbjct: 272 SLQFSPLCSGSKRYLS 287
Score = 51 (23.0 bits), Expect = 2.1e-42, Sum P(6) = 2.1e-42
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C ++ G TGS D ++W+
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWA 211
Score = 49 (22.3 bits), Expect = 9.4e-73, Sum P(7) = 9.4e-73
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYF-IKNAALSAKVERL 1704
DY + P+ +R L NY +E KD + ++ SN ++Y K + + + RL
Sbjct: 1352 DYRDIIDTPMDFATVRETLEAGNYESPMELCKD-VRLIFSNFKAYTPSKRSRIYSMSLRL 1410
Query: 1705 RDWFNRTLNKL 1715
+F ++ +
Sbjct: 1411 SAFFEEHISSV 1421
Score = 47 (21.6 bits), Expect = 9.4e-73, Sum P(7) = 9.4e-73
Identities = 27/113 (23%), Positives = 42/113 (37%)
Query: 1283 DGSKSSYKTRTDIEAFDGG--MEDGINHEASGIDSPEAASGSIRKTRSMKMKIISREPIA 1340
DGS S Y + D G ++ PE++S ++ + K K I +E
Sbjct: 842 DGSSSDYSSDYSDWTADAGINLQPPKKVPKHKTKKPESSSDEEEESENQKQKHIKKERKK 901
Query: 1341 AN------CNFKSKNGHDLVGTSKTVGNSSMEAH--DEFFPEEWIPTSTVKSR 1385
AN + K K + VG + +E+ P WI T T+ R
Sbjct: 902 ANEEKDGPTSPKKKKPKERKQKRLAVGELTENGLTLEEWLPSAWI-TDTLPRR 953
Score = 45 (20.9 bits), Expect = 9.4e-73, Sum P(7) = 9.4e-73
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 412 FVTGSSDTFARVW 424
FV+GS D AR+W
Sbjct: 380 FVSGSRDGTARIW 392
Score = 44 (20.5 bits), Expect = 3.3e-54, Sum P(7) = 3.3e-54
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 1465 YISAVETCKVVNLVYATF 1482
Y S +E CK V L+++ F
Sbjct: 1375 YESPMELCKDVRLIFSNF 1392
Score = 43 (20.2 bits), Expect = 1.0e-54, Sum P(7) = 1.0e-54
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 1170 STPLVDHQQNDDVHKSRNEDVGTNYRDE 1197
S PL D + ++K + + G N RDE
Sbjct: 1136 SVPLTDVECRSLIYKPLDGEWGANPRDE 1163
Score = 41 (19.5 bits), Expect = 1.2e-44, Sum P(7) = 1.2e-44
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
++ A++ + +T ++ +VW++ Q IH VL GHE++V
Sbjct: 426 KVTMVAWDRHDNTVITAVNNMTLKVWNSYTG------QLIH---VLMGHEDEV 469
Score = 40 (19.1 bits), Expect = 4.7e-45, Sum P(7) = 4.7e-45
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 641 DGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDY 678
+GTS S D G++ ++ G E ++ A + DY
Sbjct: 814 NGTS---SSDEGEVLAVSGGTSEEEERAWHSDGSSSDY 848
Score = 39 (18.8 bits), Expect = 1.0e-71, Sum P(7) = 1.0e-71
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 1654 VPLYP---EVIRLRLVNNYYRSLEAAKDDINVMLSNAESY 1690
V YP I+ RL N +YR + ++ + N ++
Sbjct: 1199 VVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTF 1238
Score = 38 (18.4 bits), Expect = 7.9e-72, Sum P(7) = 7.9e-72
Identities = 6/27 (22%), Positives = 16/27 (59%)
Query: 926 SKEDDRNLQNMQQQHKREEEQTIVESE 952
S +++ +N +Q+H ++E + E +
Sbjct: 880 SSDEEEESENQKQKHIKKERKKANEEK 906
Score = 37 (18.1 bits), Expect = 1.0e-54, Sum P(6) = 1.0e-54
Identities = 14/77 (18%), Positives = 29/77 (37%)
Query: 1382 VKSRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSWLMLSEHEEGYRYIPQLGDEVIYSR 1441
V SR R +G+ + ++ + V K + ++ + + LGD +
Sbjct: 732 VASRQEEWRTAKGEEEIKSYRSEEKRKHLTVAKENKILTVSKNHAHEHFLDLGDSK--KQ 789
Query: 1442 QGHQEFIESTGSQEVGP 1458
Q +Q + + E P
Sbjct: 790 QANQHNYRTRSALEETP 806
Score = 37 (18.1 bits), Expect = 9.4e-45, Sum P(7) = 9.4e-45
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 428 KSSVEDSEQPIHELD--VLSGHENDV 451
+S++E++ +P+ EL+ S E +V
Sbjct: 799 RSALEETPRPLEELENGTSSSDEGEV 824
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 319 (117.4 bits), Expect = 1.6e-72, Sum P(6) = 1.6e-72
Identities = 72/189 (38%), Positives = 101/189 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V MI W+ D+ +V+ A+ + + VWN+ G L+H L GH+ +VL+ HPF+ RI +SAG
Sbjct: 432 VTMIAWNQDDNYVVTAVNNHLLKVWNSSTGQLLHDLVGHADEVFVLETHPFDSRIMLSAG 491
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG +WDI +GT + Y I G + D KFSPDG +D G + + G
Sbjct: 492 HDGNIFIWDITKGTKTKHYFNMIEGQGHGAVFDCKFSPDGQHFACTDSHGHLLIFGFGCS 551
Query: 663 ESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPYQS 721
+ + FF DYRPLIRDS VLD++TQ PH + P L D P+ YQ
Sbjct: 552 KPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHL--MPPPFLVDVDGNPHPTKYQR 609
Query: 722 MYQQRRLGA 730
+ R A
Sbjct: 610 LVPGRENSA 618
Score = 316 (116.3 bits), Expect = 1.6e-72, Sum P(6) = 1.6e-72
Identities = 100/323 (30%), Positives = 155/323 (47%)
Query: 110 SYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGSFSLLEC 169
SY +LV H+ DH + P + I P+ + V +LLG+G SLL
Sbjct: 65 SYEELVLSNKHVAPDHLLQICK-----RIGPILDK--EIPPSISRVNSLLGAGRQSLLRT 117
Query: 170 DRSMKYKQVKPLP-AYL---RWPHMQADQVHGLSLREIGGGFKKHHRAPSVCS-ACYAIA 224
+ + K A L R P + +L E+ +RA + A ++ +
Sbjct: 118 AKDCRNTVWKGSAFAALHRGRPPEFPVNYGTPPNLVEV-------YRARQLTGYAKFSTS 170
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
P +M Q ++ +++ GH +VYC FDR+G + TGSDD LVKIWS A+ RGH
Sbjct: 171 FPGSMYQHVKMHRRILGHLSSVYCVAFDRTGHRIFTGSDDCLVKIWSTHNGRLFATLRGH 230
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP--RPSAI 342
+I+D+AV+ NT++A+ S D +IRVW L P++VL GHTG++T++ FSP + S
Sbjct: 231 SAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPVAVLHGHTGSITSLQFSPMVKGSLR 290
Query: 343 YQLLSSSDDGTCRI-WDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQIL 401
Y + + +D C WD ++S R P T K Q+L
Sbjct: 291 YMVSTGADGNVCFWQWDTDSMKFSNR------PVKFTEKPRPGV-------------QML 331
Query: 402 CCAYNANGTVFVTGSSDTFARVW 424
C +++ G TGS+D R++
Sbjct: 332 CSSFSVGGMFLATGSTDHVIRMY 354
Score = 233 (87.1 bits), Expect = 1.6e-72, Sum P(6) = 1.6e-72
Identities = 92/387 (23%), Positives = 172/387 (44%)
Query: 1288 SYKTRTDIEAFDGGMED-GIN--------HEASGIDSPEAASGSIRKTRSMKMKIISREP 1338
+Y+TR +IE D ED G + E SG E S +K+ + ++ +
Sbjct: 808 NYRTRNNIEQLDSSDEDKGSSILFQEAEESEGSGSSEEEEEWRSDKKSNTFSSRV--SDS 865
Query: 1339 IAANCNFKSKNGHDLVGTSKTVGNSSMEAHDEFFPEEWIPTSTVKSRPRSTRNRRGDHDG 1398
+ ++ + G +L +T ++ + +E S KS P R R+
Sbjct: 866 SSRYSDWIADAGINLQPPVRTSRRKAVR-YCSTSEDE---VSAGKSSPPKRRRRKRRKKP 921
Query: 1399 HPCLLSGRKSNFPVRKL-SWLMLSEH------EEGYR---YIPQLGDEVIYSRQGHQEFI 1448
P G +N P + + S L H + R ++PQ+GDEVIY RQGH+ +I
Sbjct: 922 RPKKQEG--ANTPTQPVNSELSYDWHPPVWITDTALRRSPFVPQMGDEVIYFRQGHEAYI 979
Query: 1449 ESTGSQEV-------GPWWSINGYISAVETCKVVNLVYATFPGSGDSCCKITLKFVDPSS 1501
E+ + PW + + E K+V + Y P + CC + L F+D ++
Sbjct: 980 EAVRRNNIYELNPHKEPWRKV--VLRDQELVKIVGIRYEVGPPT--LCC-LKLAFIDHAT 1034
Query: 1502 SV-LGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRDKCQIWWRNANGEGGTWWKGR 1560
K+F + ++ D DF++ + YD A RNW D+ +R+ + WW G
Sbjct: 1035 GKHTDKSFSIKYHDMPDVIDFLILRQFYDEARQRNWQASDR----FRSIIDDA--WWFGT 1088
Query: 1561 ITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHDPNVMWEHPEIDSESRDKLLSSF 1620
+ + ++P+S + Y V++ G+ SPW+M + + PE E + +F
Sbjct: 1089 VLGQEPYQPQYPDSHFQCYSVKWDNGEVEKLSPWDMEPISDNVDQPE---ELGASVSVTF 1145
Query: 1621 NKLEQSVSRKQD-YYGIQRLNEAAQKL 1646
++E+ + + ++ +G++ +EA +++
Sbjct: 1146 EEMEKLLYKPEEGEWGMRSRDEACERI 1172
Score = 114 (45.2 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 41/141 (29%), Positives = 59/141 (41%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETA----FCLASCRGHEGD-- 287
+ I +L H D V F SG I+GS D +IW E A L GD
Sbjct: 362 ERIAELESHADKVDSIQFSNSGDRFISGSRDGTARIWRFEEAEWRSILLDMSDRLPGDMC 421
Query: 288 ----------ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
+T +A + ++ V +A N+ +++VW G + L GH V + P
Sbjct: 422 SDEDKFMRPKVTMIAWNQDDNYVVTAVNNHLLKVWNSSTGQLLHDLVGHADEVFVLETHP 481
Query: 338 RPSAIYQLLSSSDDGTCRIWD 358
S I +LS+ DG IWD
Sbjct: 482 FDSRI--MLSAGHDGNIFIWD 500
Score = 92 (37.4 bits), Expect = 5.8e-21, Sum P(4) = 5.8e-21
Identities = 41/168 (24%), Positives = 65/168 (38%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S +A+ S D VIR++ P I+ L H V +I FS + +S S D
Sbjct: 336 SVGGMFLATGSTDHVIRMYYFGSETPERIAELESHADKVDSIQFSNSGD---RFISGSRD 392
Query: 352 GTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTV 411
GT RIW R+ + R L D + G ++ A+N +
Sbjct: 393 GTARIW--RFEEAEWRSILLDMSDRLPGDMCSDEDK-------FMRPKVTMIAWNQDDNY 443
Query: 412 FVTGSSDTFARVWSACKSSV-EDSEQPIHELDVLSGHENDVNYVQFSG 458
VT ++ +VW++ + D E+ VL H D + +G
Sbjct: 444 VVTAVNNHLLKVWNSSTGQLLHDLVGHADEVFVLETHPFDSRIMLSAG 491
Score = 91 (37.1 bits), Expect = 9.3e-49, Sum P(5) = 9.3e-49
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIW--SMETAFCLASCRGHEGDITDLAVSSNNTLVASASN 305
C+ F G F+ TGS D +++++ ET +A H + + S++ S S
Sbjct: 332 CSSFSVGGMFLATGSTDHVIRMYYFGSETPERIAELESHADKVDSIQFSNSGDRFISGSR 391
Query: 306 DFVIRVWRLPDGLPISVL 323
D R+WR + S+L
Sbjct: 392 DGTARIWRFEEAEWRSIL 409
Score = 79 (32.9 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 68/311 (21%), Positives = 130/311 (41%)
Query: 925 QSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKK 984
+S+ + N K +++ T SE G+ ++L S++ N ++ + K+S KK
Sbjct: 1897 ESETNSNNSNYFDASSKTKKKST---SEEPGQSGKVLRSRTCIINYRKHI-KVSNVTEKK 1952
Query: 985 ------ALSLEDTRVKGDDMAKLPQSSSGPPQGTTERKID-----LSLKEPGSSSAGSGI 1033
L+ ++ D +L S S R++ S K+P SSS I
Sbjct: 1953 NPRRCATLAANKIKIMSDTKEELSSSESVCTVKKNRRQLHGSASGASKKKPISSS---DI 2009
Query: 1034 DVGLSQKHNRIVFADGSQDEKYDSQLEESA--GDMENKTRWAEVKIRTSKRSS---SSGV 1088
DV + ++ + +DG D S + + E++ +EV+I +K+ + S
Sbjct: 2010 DVSVMSENEKEQDSDGKNDFCSGSSAPKRKYISESEDEKTESEVEIEVTKKENDNDSQTK 2069
Query: 1089 LLPPDANFDVHNDSIGDVNRCVKLENGHGKFSSNSETSCYGCVRSCSDKEKFGSDALLDL 1148
DA DS + + K+ENG +S TS Y S S++E A +
Sbjct: 2070 RTESDAALKNTFDSSEENSTNHKVENGRNWRTSGQSTSAYNHHVSNSEEEVSSELAKRET 2129
Query: 1149 ASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRVRI 1208
++R+ AR+ K+S + PL + ++D+ ++ G +++E + +
Sbjct: 2130 KTIRR---ARN---KRSRA----PLKRLKLSNDLKETSESAAGR----KIEEKSSVSENV 2175
Query: 1209 RTKGILRDTKS 1219
T G +K+
Sbjct: 2176 ETPGTAGSSKA 2186
Score = 75 (31.5 bits), Expect = 3.4e-20, Sum P(5) = 3.4e-20
Identities = 21/75 (28%), Positives = 34/75 (45%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRI 625
DC + +W+ +G L +L GHSA + V+ N IA + D VW + P+ +
Sbjct: 210 DCLVKIWSTHNGRLFATLRGHSAEISDMAVNYENTMIA-AGSCDKMIRVWCLRTCAPVAV 268
Query: 626 YEIGRFKLVDGKFSP 640
+ +FSP
Sbjct: 269 LHGHTGSITSLQFSP 283
Score = 70 (29.7 bits), Expect = 1.6e-72, Sum P(6) = 1.6e-72
Identities = 24/75 (32%), Positives = 32/75 (42%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGISFPLS 110
E+YFLI FLS+GPC+ T P+R W GN++ S
Sbjct: 20 ELYFLIARFLSTGPCRGTLRVLVQELEQHQLLPKRLD-W-------EGNEHYR------S 65
Query: 111 YNKLVERYPHIEWDH 125
Y +LV H+ DH
Sbjct: 66 YEELVLSNKHVAPDH 80
Score = 66 (28.3 bits), Expect = 6.9e-54, Sum P(7) = 6.9e-54
Identities = 46/218 (21%), Positives = 79/218 (36%)
Query: 1191 GTNYRDELKENPPLRVRIRTKGILRD-TKSPS---EQKSSTSVKDLPSAESDPI--PMSE 1244
G ++++ N R++++ + TK PS +QK S + S + D P S
Sbjct: 1431 GQKQNEKIRRNQRYTRRVQSQSSAQHPTKMPSRNLKQKPLKSQAKIESEQEDSFSQPTSS 1490
Query: 1245 SSLCMEGNLMSEVPEEAEGYGRSSSDQLLNS-NLKFKVRDGSKSSYKTRTDIEAFDGGME 1303
+ C+ + + G SS L S K R + ++ T + +G +
Sbjct: 1491 RAACVASHKTNASNYNHSSSGESSDSACLASFERNGKARSTTLTNRSTLSSESEVEGSLA 1550
Query: 1304 DGINHEASGIDSPEAASGSIRKTRSMKMK--IISREPIAANCNFKSKNG--HDLVGT-SK 1358
+ +S +S E + S S + I R+ I NC +GT +
Sbjct: 1551 SSTSSSSSTEESSEESKESSVALVSPPLHNGICRRKNI--NCRITRNQAAQRKQIGTLPQ 1608
Query: 1359 TVGNSSMEAHDEFFPEEWIPTSTVKSRPRSTRNRRGDH 1396
GN+ + + TS V S S N G H
Sbjct: 1609 ENGNTRKAVRKRLYESDSENTSAVTSE--SLSNSTGRH 1644
Score = 63 (27.2 bits), Expect = 1.6e-72, Sum P(6) = 1.6e-72
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRDWFNRT 1711
+P L IR RL N +YR + A ++ + SNA ++ +A++ +++ +
Sbjct: 1206 YPTDL--NTIRTRLANRFYRRISALVWEVRYIESNARTFNEPGSAIARAAKKITTQLLKF 1263
Query: 1712 LN 1713
+N
Sbjct: 1264 IN 1265
Score = 62 (26.9 bits), Expect = 8.8e-46, Sum P(5) = 8.8e-46
Identities = 24/80 (30%), Positives = 31/80 (38%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 231 SAEISDMAVNYENTMIAAGSCDKMIRVW--CLRTCA----PVA---VLHGHTGSITSLQF 281
Query: 457 SGCAVASRSAMSDAFKEENV 476
S S M + NV
Sbjct: 282 SPMVKGSLRYMVSTGADGNV 301
Score = 62 (26.9 bits), Expect = 6.8e-19, Sum P(5) = 6.8e-19
Identities = 29/108 (26%), Positives = 43/108 (39%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF---NPRIAMSAGYDGRT 612
+N + A D I VW + V L GH+ S L P + R +S G DG
Sbjct: 242 ENTMIAAGSCDKMIRVWCLRTCAPVAVLHGHTGSITSLQFSPMVKGSLRYMVSTGADGNV 301
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTG 660
W W+ ++ + K + K P + S VG ++L TG
Sbjct: 302 CFWQ-WDTDSMK-FSNRPVKFTE-KPRPGVQMLCSSFSVGGMFLA-TG 345
Score = 57 (25.1 bits), Expect = 6.7e-46, Sum P(6) = 6.7e-46
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ G TGS D ++WS
Sbjct: 192 VYCVAFDRTGHRIFTGSDDCLVKIWS 217
Score = 55 (24.4 bits), Expect = 1.3e-71, Sum P(6) = 1.3e-71
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ ++ L NY +E KD I ++ SNA+SY K + + + RL
Sbjct: 1355 DYRHIIDTPMDFGTVKETLEAGNYDTPMELCKD-IRLIFSNAKSYTPNKKSKIYSMTLRL 1413
Query: 1705 RDWFNRTLNKL 1715
F + ++
Sbjct: 1414 SALFEEKIRRI 1424
Score = 55 (24.4 bits), Expect = 6.6e-53, Sum P(6) = 6.6e-53
Identities = 62/311 (19%), Positives = 110/311 (35%)
Query: 928 EDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLE-SQSDTGNRKRLVLKLSLRDHKKAL 986
E+D N + ++ EQ++ ++F+ E S+SD N ++L + KKA
Sbjct: 1787 EEDSKSHNSEDGSSQKAEQSMSANKFVVSNSEDEACSESDRWNARKLFGLHLVAPIKKAK 1846
Query: 987 SLEDTRVKGDDMAKLPQSSSGPPQGT-TERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIV 1045
L D + + Q T +I S + D N
Sbjct: 1847 VLSDLEDTAESETEDRQDGRSVVSETLVPCRITASPNSGPGADFNDSCDTESETNSNNSN 1906
Query: 1046 FADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIGD 1105
+ D S K S EE G R I K S V + ++
Sbjct: 1907 YFDASSKTKKKSTSEEP-GQSGKVLRSRTCIINYRKHIKVSNVTEKKNPR---RCATLA- 1961
Query: 1106 VNRCVKLENGHGKFSSNSETSC---------YGCVRSCSDKEKFGSDALLDLASVRKEEL 1156
N+ +K+ + + S+SE+ C +G S K+ S + D++ + + E
Sbjct: 1962 ANK-IKIMSDTKEELSSSESVCTVKKNRRQLHGSASGASKKKPISSSDI-DVSVMSENEK 2019
Query: 1157 ARHEDIKKS-SSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILR 1215
+ D K S +S P + + K+ +E V + +N R + L+
Sbjct: 2020 EQDSDGKNDFCSGSSAPKRKYISESEDEKTESE-VEIEVTKKENDNDSQTKRTESDAALK 2078
Query: 1216 DTKSPSEQKSS 1226
+T SE+ S+
Sbjct: 2079 NTFDSSEENST 2089
Score = 53 (23.7 bits), Expect = 1.6e-72, Sum P(6) = 1.6e-72
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 445 SGHENDVNYVQFSGCAVASRSAM--SDAFKEENVPKFKNSWFCHDNIVTCSRDGSAIIW 501
+G + V + + G R A S A K +++ +F NS D ++ SRDG+A IW
Sbjct: 344 TGSTDHVIRMYYFGSETPERIAELESHADKVDSI-QFSNSG---DRFISGSRDGTARIW 398
Score = 51 (23.0 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 14/66 (21%), Positives = 26/66 (39%)
Query: 716 EEPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDP 775
+EPYQ Y ++W ++ D D P E+L + E ++
Sbjct: 1092 QEPYQPQYPDSHFQCYSVKWDNGEVEKLSPWDMEPISDNVDQP-EELGASVSVTFEEMEK 1150
Query: 776 VYWEPE 781
+ ++PE
Sbjct: 1151 LLYKPE 1156
Score = 51 (23.0 bits), Expect = 1.7e-52, Sum P(6) = 1.7e-52
Identities = 31/126 (24%), Positives = 49/126 (38%)
Query: 1131 VRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDV 1190
++S S+KE + S+ R + + +S + +S D Q +S
Sbjct: 1707 LKSESEKETEEQLTKRKVLSLSTSSAVRRKFVSESENESSDSETDTQMKQKTWQSNGHRQ 1766
Query: 1191 --GTNYRDELKENPPLRVRIRTKGILR-DTKSP-SEQKSSTSVKDLPSAESDPIPMSESS 1246
GT L +P +R T+G D+KS SE SS + SA + SE
Sbjct: 1767 LRGT----ALSASPEMRSP--TRGFSEEDSKSHNSEDGSSQKAEQSMSANKFVVSNSEDE 1820
Query: 1247 LCMEGN 1252
C E +
Sbjct: 1821 ACSESD 1826
Score = 46 (21.3 bits), Expect = 3.3e-53, Sum P(6) = 3.3e-53
Identities = 28/126 (22%), Positives = 55/126 (43%)
Query: 1177 QQNDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAE 1236
++ D+++S E +++ K + + I++K L K P+ ++ +++ L S++
Sbjct: 767 EEERDLYQS--EKRRKSFQSSEKSDSETSI-IQSKRRLHRRKYPN-YRTRNNIEQLDSSD 822
Query: 1237 SDPIPMSESSLCMEGNLMSEVPEEAEGYGRSSSDQLLNSNLKFKVRDGSKSSYKTRTDIE 1296
D SS+ L E EE+EG G S ++ S+ K S +R
Sbjct: 823 ED----KGSSI-----LFQEA-EESEGSGSSEEEEEWRSDKKSNTFSSRVSDSSSRYSDW 872
Query: 1297 AFDGGM 1302
D G+
Sbjct: 873 IADAGI 878
Score = 44 (20.5 bits), Expect = 6.9e-54, Sum P(7) = 6.9e-54
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 1592 SPWEMHDPNVMWEHPEIDSESRDKLLSSFNKLEQSVSRKQDYYGIQRLNEAAQKLDYLNR 1651
SP EM P + E DS+S + S K EQS+S + + +EA + D N
Sbjct: 1775 SP-EMRSPTRGFS--EEDSKSHNSEDGSSQKAEQSMSANK-FVVSNSEDEACSESDRWNA 1830
Query: 1652 ---FPVPLYPEVIRLRLVNNYYRSLEAAKDD 1679
F + L + + +++++ + E+ +D
Sbjct: 1831 RKLFGLHLVAPIKKAKVLSDLEDTAESETED 1861
Score = 41 (19.5 bits), Expect = 1.8e-51, Sum P(6) = 1.8e-51
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 832 ELKTSSGRRVRKRNLDERDGSASGSNR 858
EL +S K+N + GSASG+++
Sbjct: 1974 ELSSSESVCTVKKNRRQLHGSASGASK 2000
Score = 41 (19.5 bits), Expect = 8.2e-16, Sum P(4) = 8.2e-16
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 603 AMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDG--KFS 639
A +A + GR + + GTP + E+ R + + G KFS
Sbjct: 130 AFAALHRGRPPEFPVNYGTPPNLVEVYRARQLTGYAKFS 168
Score = 39 (18.8 bits), Expect = 1.7e-52, Sum P(6) = 1.7e-52
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 1033 IDVGLSQKHNRIVFADGSQDEKYDSQLEESA--GDMENKTRWAEVKIRTSKRS---SSSG 1087
+D K + I+F + + E S EE D ++ T + V +S+ S + +G
Sbjct: 818 LDSSDEDKGSSILFQEAEESEGSGSSEEEEEWRSDKKSNTFSSRVSDSSSRYSDWIADAG 877
Query: 1088 VLLPP 1092
+ L P
Sbjct: 878 INLQP 882
>RGD|1309030 [details] [associations]
symbol:Brwd1 "bromodomain and WD repeat domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0007010 "cytoskeleton organization" evidence=IEA;ISO]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 RGD:1309030 GO:GO:0005737 GO:GO:0007010 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 OMA:NDNGERS OrthoDB:EOG470TGD
GeneTree:ENSGT00700000104382 EMBL:AC112406 IPI:IPI00762963
Ensembl:ENSRNOT00000002231 UCSC:RGD:1309030 ArrayExpress:D4AAI9
Uniprot:D4AAI9
Length = 2303
Score = 349 (127.9 bits), Expect = 1.7e-72, Sum P(7) = 1.7e-72
Identities = 98/282 (34%), Positives = 147/282 (52%)
Query: 150 PNAADVPTLLGSGSFSLLECDRSMKYKQVKPLP-AYL---RWPHMQADQVHGLSLREIGG 205
P+ + V +LLG+G SLL + ++ K A L R P M + SL +I
Sbjct: 95 PSISRVTSLLGAGRQSLLRTAKDCRHTVWKGSAFAALHRGRPPEMPVNYGPPPSLVDIHR 154
Query: 206 GFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDR 265
G + + CS ++ A P TM Q ++ +++ GH AVYC FDR+G + TGSDD
Sbjct: 155 G-----KQLTGCST-FSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDC 208
Query: 266 LVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRG 325
LVKIWS L++ RGH +I+D+AV+ NTL+A+ S D +IRVW L P++VL+G
Sbjct: 209 LVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIAAGSCDKIIRVWCLRTCAPVAVLQG 268
Query: 326 HTGAVTAIAFSPRPSAIYQ-LLSSSDDGTCRIW--DARYSQYSPRIYLPKPPDAITGKXX 382
HTG++T++ FSP + ++S+ DGT W D ++SPR P T K
Sbjct: 269 HTGSITSLQFSPMAKGPQRYMVSTGADGTVCFWQWDLESLKFSPR------PLKFTEKPR 322
Query: 383 XXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVW 424
Q+LC +++ G TGS+D R++
Sbjct: 323 PGV-------------QMLCSSFSVGGMFLATGSTDHVIRMY 351
Score = 299 (110.3 bits), Expect = 1.7e-72, Sum P(7) = 1.7e-72
Identities = 84/266 (31%), Positives = 122/266 (45%)
Query: 473 EENVPKFKNSWFCH--DNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXX 530
E + K + FC+ D ++ SRDG+A IW R + W K
Sbjct: 365 ESHTDKVDSIQFCNNGDRFLSGSRDGTARIW--RFEQLE-----W------KSILLDMAA 411
Query: 531 XXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASS 590
V MI W+ D+ V+ A+ D + VW++ G L+H+L GH+
Sbjct: 412 RISGDTSAEEERFMKPKVTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEV 471
Query: 591 YVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSI 645
+VL+ HPF+ RI +SAG+DG +WDI +G ++ Y I G + D KFS DG
Sbjct: 472 FVLETHPFDSRIMLSAGHDGSIFIWDITKGIKMKHYFNMIEGQGHGAVFDCKFSQDGQHF 531
Query: 646 VLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQD 705
+D G + + G + + FF DYRPLIRDS VLD++TQ PH +
Sbjct: 532 ACTDSHGHLLIFGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHL--MPP 589
Query: 706 P-LCDSSMIPYEEPYQSMYQQRRLGA 730
P L D P+ +Q + R A
Sbjct: 590 PFLVDVDGNPHPTKFQRLVPGRENSA 615
Score = 231 (86.4 bits), Expect = 1.7e-72, Sum P(7) = 1.7e-72
Identities = 72/291 (24%), Positives = 136/291 (46%)
Query: 1367 AHDEFFPEEWIPTSTVKSRPRSTRNRRGD-HDGHPCLLSGRKSNFPVRKLSWLMLSEHEE 1425
+ DE E P + R + ++ +R P L+ + + W+ + +
Sbjct: 896 SEDEMSTENISPPKRRRKRRKESKPKRESLRRTTPAELANMEPLYEFHPPVWITDTTLRK 955
Query: 1426 GYRYIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLV 1478
++PQ+GDEV+Y RQGH+ +IE+ + PW ++ + E K+V L
Sbjct: 956 S-PFVPQMGDEVMYFRQGHEAYIEAVRRNNIYELNPNKEPWRKMD--LRDQELVKIVGLR 1012
Query: 1479 YATFPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWT 1537
Y P + CC + L F+DP++ L K+F + ++ D DF+V + YD A RNW
Sbjct: 1013 YEVGPPT--LCC-LKLAFIDPATGRLTDKSFSIRYHDMPDVIDFLVLRQFYDEARQRNWQ 1069
Query: 1538 HRDKCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMH 1597
D+ +R+ + WW G + + ++P+S + Y V + + SPW+M
Sbjct: 1070 PSDR----FRSIIDDA--WWFGTVLSQEPYQPQYPDSHFQCYSVRWDNTEIEKLSPWDME 1123
Query: 1598 D-PNVMWEHPEIDSESRDKLLSSFNKLEQSVSRKQD-YYGIQRLNEAAQKL 1646
P+ + + PE E + + ++LE+ + + QD +G + +E +++
Sbjct: 1124 PIPDNV-DPPE---ELGASISVTSDELEKLLYKPQDGEWGQRSRDEECERI 1170
Score = 114 (45.2 bits), Expect = 2.1e-22, Sum P(6) = 2.1e-22
Identities = 40/141 (28%), Positives = 61/141 (43%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGD-- 287
+ I +L H D V F +G ++GS D +IW E + L GD
Sbjct: 359 EKIAELESHTDKVDSIQFCNNGDRFLSGSRDGTARIWRFEQLEWKSILLDMAARISGDTS 418
Query: 288 ----------ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
+T +A + +++ V +A ND V++VW G + L GH V + P
Sbjct: 419 AEEERFMKPKVTMIAWNQDDSTVVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHP 478
Query: 338 RPSAIYQLLSSSDDGTCRIWD 358
S I +LS+ DG+ IWD
Sbjct: 479 FDSRI--MLSAGHDGSIFIWD 497
Score = 99 (39.9 bits), Expect = 6.5e-21, Sum P(6) = 6.5e-21
Identities = 38/135 (28%), Positives = 56/135 (41%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S +A+ S D VIR++ L P I+ L HT V +I F + LS S D
Sbjct: 333 SVGGMFLATGSTDHVIRMYFLGFEAPEKIAELESHTDKVDSIQFCNNGD---RFLSGSRD 389
Query: 352 GTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTV 411
GT RIW R+ Q + L I+G ++ A+N + +
Sbjct: 390 GTARIW--RFEQLEWKSILLDMAARISGDTSAEEER-------FMKPKVTMIAWNQDDST 440
Query: 412 FVTGSSDTFARVWSA 426
VT +D +VWS+
Sbjct: 441 VVTAVNDHVLKVWSS 455
Score = 80 (33.2 bits), Expect = 1.6e-19, Sum P(6) = 1.6e-19
Identities = 23/85 (27%), Positives = 43/85 (50%)
Query: 258 VITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS-NNTLVASASNDFVIRVWRLPD 316
V+T +D ++K+WS T L + GH ++ L ++ ++ SA +D I +W +
Sbjct: 441 VVTAVNDHVLKVWSSYTGQLLHNLLGHADEVFVLETHPFDSRIMLSAGHDGSIFIWDITK 500
Query: 317 GLPI----SVLRGHT-GAVTAIAFS 336
G+ + +++ G GAV FS
Sbjct: 501 GIKMKHYFNMIEGQGHGAVFDCKFS 525
Score = 79 (32.9 bits), Expect = 3.0e-20, Sum P(7) = 3.0e-20
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
DC + +W+ +G L+ +L GHSA + V+ N IA AG + I VW + P+
Sbjct: 207 DCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTLIA--AGSCDKIIRVWCLRTCAPVA 264
Query: 625 IYEIGRFKLVDGKFSP 640
+ + + +FSP
Sbjct: 265 VLQGHTGSITSLQFSP 280
Score = 74 (31.1 bits), Expect = 1.7e-72, Sum P(7) = 1.7e-72
Identities = 23/75 (30%), Positives = 33/75 (44%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGISFPLS 110
E+YFLI +LS+GPC+R P+R W GN+++ S
Sbjct: 17 ELYFLIARYLSAGPCRRAAQVLVQELEQYQLLPKRLD-W-------EGNEHNR------S 62
Query: 111 YNKLVERYPHIEWDH 125
Y +LV H+ DH
Sbjct: 63 YEELVLSNKHVAPDH 77
Score = 69 (29.3 bits), Expect = 1.7e-72, Sum P(7) = 1.7e-72
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRD 1706
+P LY IR+RLV+ +YR L A ++ + NA ++ + ++ +++ D
Sbjct: 1204 YPTDLY--TIRMRLVHRFYRRLSALIWEVRYIEHNARTFNEPESVIARSAKKITD 1256
Score = 65 (27.9 bits), Expect = 6.8e-19, Sum P(7) = 6.8e-19
Identities = 35/128 (27%), Positives = 49/128 (38%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF--NP-RIAMSAGYDGRT 612
+N + A D I VW + V L GH+ S L P P R +S G DG
Sbjct: 239 ENTLIAAGSCDKIIRVWCLRTCAPVAVLQGHTGSITSLQFSPMAKGPQRYMVSTGADGTV 298
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQ 672
W W+ ++ + K + K P + S VG ++L TG D
Sbjct: 299 CFWQ-WDLESLK-FSPRPLKFTE-KPRPGVQMLCSSFSVGGMFLA-TGS----TDHVIRM 350
Query: 673 FFLGDYRP 680
+FLG P
Sbjct: 351 YFLGFEAP 358
Score = 61 (26.5 bits), Expect = 6.7e-43, Sum P(7) = 6.7e-43
Identities = 21/64 (32%), Positives = 27/64 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 228 SAEISDMAVNYENTLIAAGSCDKIIRVW--CLRTCA----PVA---VLQGHTGSITSLQF 278
Query: 457 SGCA 460
S A
Sbjct: 279 SPMA 282
Score = 58 (25.5 bits), Expect = 2.2e-56, Sum P(5) = 2.2e-56
Identities = 14/67 (20%), Positives = 28/67 (41%)
Query: 716 EEPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDP 775
+EPYQ Y + W + I+ D D PP E+L + + ++
Sbjct: 1090 QEPYQPQYPDSHFQCYSVRWDNTEIEKLSPWDMEPIPDNVDPP-EELGASISVTSDELEK 1148
Query: 776 VYWEPEN 782
+ ++P++
Sbjct: 1149 LLYKPQD 1155
Score = 57 (25.1 bits), Expect = 1.7e-42, Sum P(7) = 1.7e-42
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ G TGS D ++WS
Sbjct: 189 VYCVAFDRTGHRIFTGSDDCLVKIWS 214
Score = 56 (24.8 bits), Expect = 3.7e-71, Sum P(7) = 3.7e-71
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ +R L NY +E KD I ++ SNA++Y K + + + RL
Sbjct: 1350 DYRDIIDTPMDFGTVRETLEAGNYDSPVEFCKD-IRLIFSNAKAYTPNKRSKIYSMTLRL 1408
Query: 1705 RDWFNRTLNKL 1715
F + K+
Sbjct: 1409 SALFEEKMKKI 1419
Score = 53 (23.7 bits), Expect = 2.4e-54, Sum P(7) = 2.4e-54
Identities = 24/107 (22%), Positives = 42/107 (39%)
Query: 1113 ENGHGKFSSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTP 1172
E H + E S C S ++ E+ GS + + +L D + SSSF T
Sbjct: 1963 EGKHARCEVPEEQSA--CRSSLAEPEQQGSAE--NASQAANADL----DFEGSSSFEQTK 2014
Query: 1173 LVDHQQNDDV-----HKSRNEDVGTNYRDELKENPPLRVRIRTKGIL 1214
+ +Q D V K++N G + D + + ++ +L
Sbjct: 2015 SIQKRQMDSVCIRAPSKTQNSSAGPSQEDPKSHTQDSDISLSSESVL 2061
Score = 50 (22.7 bits), Expect = 2.4e-54, Sum P(7) = 2.4e-54
Identities = 46/206 (22%), Positives = 81/206 (39%)
Query: 929 DDRNLQNMQQQHKREEEQTIVESE--FMGKPLELLESQSDTGNRKRLVLKLSLRDHKKAL 986
DD++L++ + + R+ Q ++ S + + ES SD ++ H A
Sbjct: 1681 DDQSLKS-ETEEVRDRNQALLMSSPHAVQNCISDSESDSDLQAARKTWHANGCTSHPAAA 1739
Query: 987 SLEDTRV--KGDDMAKLPQSSSGPPQG----TTERKIDL-SLKEPGSSSAGS---GIDVG 1036
+R ++ ++ +S GP T+ +K+ S+ E S GS G +
Sbjct: 1740 CKAKSRPIESSEEDSRCHESDHGPSSTVDPLTSGQKLGADSISEEADSEPGSSALGKNTH 1799
Query: 1037 LSQKHNRIVFADGSQ-DEKYDSQL--EESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPD 1093
LS+K + +D +EKY + E + R A + + S G D
Sbjct: 1800 LSKKAK--ILSDSEDCEEKYGERRGPEVEGSPVSEALREAVI---VPQCLSHHGPETDVD 1854
Query: 1094 ANFD-VHNDSIGDVNRCVKLENGHGK 1118
++ V S +VN V ENG K
Sbjct: 1855 SDGSAVREKSHSNVNDSVSRENGQRK 1880
Score = 47 (21.6 bits), Expect = 9.8e-54, Sum P(7) = 9.8e-54
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 1363 SSMEAHDEFFPEEWIPTSTVKSRP 1386
++ME EF P WI +T++ P
Sbjct: 934 ANMEPLYEFHPPVWITDTTLRKSP 957
Score = 45 (20.9 bits), Expect = 6.5e-54, Sum P(5) = 6.5e-54
Identities = 31/130 (23%), Positives = 54/130 (41%)
Query: 1352 DLVGTSKTVGNSSMEAHDEFFPEEWIPTSTVKSRPRSTRNRRGDHDGHPCLLSGRKSNFP 1411
+L TS + G+S+ + D P+ TS+ + R + + R G C+ S +
Sbjct: 1272 ELCNTSDSDGDSADDLDDSDLPK----TSSGRRRVHNWKRRSR---GSSCIESDWRRQCK 1324
Query: 1412 VRKLSWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGS-QEVGPWWSINGYISAVE 1470
L + E E +R Q D V Y +++ I++ V Y S VE
Sbjct: 1325 AL-LILIFQCEDSEPFR---QPVDLVEYP--DYRDIIDTPMDFGTVRETLEAGNYDSPVE 1378
Query: 1471 TCKVVNLVYA 1480
CK + L+++
Sbjct: 1379 FCKDIRLIFS 1388
Score = 45 (20.9 bits), Expect = 4.9e-53, Sum P(6) = 4.9e-53
Identities = 44/221 (19%), Positives = 83/221 (37%)
Query: 1118 KFSSNSETSC---YGCVRSCSDKEKFGSDALLDLASVRKEELARH-EDIKKSSSFNSTPL 1173
K S+SE C YG R + S+AL + A + + L+ H + S ++
Sbjct: 1805 KILSDSE-DCEEKYGERRGPEVEGSPVSEALRE-AVIVPQCLSHHGPETDVDSDGSAVRE 1862
Query: 1174 VDHQQ-NDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSE-QKSSTSVKD 1231
H ND V + + + + + +++ K + D SPS +S+ V D
Sbjct: 1863 KSHSNVNDSVSRENGQRKKVSRKRFCSSDSESNLQVIQKSPI-DQTSPSRITRSAGMVTD 1921
Query: 1232 LPSAESDPIPMSESSLCMEGNLMSEVPEEAEGYGRSSSDQLLNSNLKFKVRDGSKSSYKT 1291
SD +S S+C + P S + + +V + + +
Sbjct: 1922 KTKLTSDAEDVSLESVCTRSKRRRKKPVRFACTTAKSIPSSEGKHARCEVPEEQSACRSS 1981
Query: 1292 RTDIEAFDGGMEDGINHEASGIDSPEAASGSIRKTRSMKMK 1332
+ E G E+ +A+ D S S +T+S++ +
Sbjct: 1982 LAEPEQ-QGSAENA--SQAANADLDFEGSSSFEQTKSIQKR 2019
Score = 44 (20.5 bits), Expect = 6.1e-55, Sum P(5) = 6.1e-55
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 766 MEPVPEFIDPVYWEPENEVISDDNDSEYNIAEECASEAEQGRDSEVE 812
MEP+P+ +DP + ++ D + + ++ RD E E
Sbjct: 1122 MEPIPDNVDPPEELGASISVTSDELEKLLYKPQDGEWGQRSRDEECE 1168
Score = 42 (19.8 bits), Expect = 1.6e-19, Sum P(6) = 1.6e-19
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 337 PRPSAIYQLLSSSDDGTCRIWDARYSQYSPR 367
P+ S L+S S TCR +Y+ YS R
Sbjct: 782 PQKSNSMVLVSQSRQRTCR---RKYANYSRR 809
Score = 41 (19.5 bits), Expect = 1.7e-72, Sum P(7) = 1.7e-72
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 1100 NDSIGDVNRCVKLENGHGKFSS-NSETSCYGCVRSCSDKE-KFGSD 1143
N S + +C +L +G+ S ETSC SCS ++ ++ SD
Sbjct: 805 NYSRRNAGQC-ELSSGNESSGSVRHETSCDQSEGSCSSEDDEWRSD 849
Score = 39 (18.8 bits), Expect = 2.4e-54, Sum P(7) = 2.4e-54
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 834 KTSSGRRVRKRNLDERDGSAS 854
KTSSGRR R N R +S
Sbjct: 1294 KTSSGRR-RVHNWKRRSRGSS 1313
Score = 39 (18.8 bits), Expect = 6.4e-53, Sum P(7) = 6.4e-53
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 1121 SNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIK-KSSSFNSTPLVDHQQN 1179
+ S+ C ++ K++ G +L SVRK+ R K + FN V Q +
Sbjct: 2151 TESDVDCTDNTKAQRRKKRKGKTRVLSQESVRKD---REPHTKTRPCMFNEKEAV--QMH 2205
Query: 1180 DDVHKSR 1186
D K +
Sbjct: 2206 SDTLKPK 2212
Score = 38 (18.4 bits), Expect = 9.4e-54, Sum P(6) = 9.4e-54
Identities = 17/75 (22%), Positives = 26/75 (34%)
Query: 783 EVISDDNDSEYNIAEECASEAEQGRDSEVEXXXXXXXXXXXXXXXXAEVELKTSSGRRVR 842
+++SD D E E E E SE +V+ S G VR
Sbjct: 1805 KILSDSEDCEEKYGERRGPEVEGSPVSEALREAVIVPQCLSHHGPETDVD---SDGSAVR 1861
Query: 843 KRNLDERDGSASGSN 857
+++ + S S N
Sbjct: 1862 EKSHSNVNDSVSREN 1876
Score = 38 (18.4 bits), Expect = 2.5e-52, Sum P(6) = 2.5e-52
Identities = 22/98 (22%), Positives = 41/98 (41%)
Query: 1120 SSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQN 1179
S+ +TS G C+ + SD+ L VR RH ++ + S ++ +
Sbjct: 1488 SATRKTSA-GVSSGCTSGDS--SDSAGSLERVR-----RH----RAETLRSGSVLFGSEM 1535
Query: 1180 DDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDT 1217
+D + + +N DE KE+ + G+LR +
Sbjct: 1536 EDFLATSSSSSSSNSSDESKESSGAQECSLRSGVLRSS 1573
Score = 38 (18.4 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 425 SACKSSVEDSEQ 436
SAC+SS+ + EQ
Sbjct: 1976 SACRSSLAEPEQ 1987
Score = 37 (18.1 bits), Expect = 1.7e-72, Sum P(7) = 1.7e-72
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 919 LQDSHVQSKEDDRNLQNMQQQHK 941
L+D ++ E++RNL + ++ K
Sbjct: 755 LEDIRIERGEEERNLYVIGRKKK 777
>ZFIN|ZDB-GENE-050208-261 [details] [associations]
symbol:phip "pleckstrin homology domain interacting
protein" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017956 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 SMART:SM00384 ZFIN:ZDB-GENE-050208-261
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:CR759802 EMBL:CR735144 IPI:IPI00634562
Ensembl:ENSDART00000138106 Bgee:E9QJ97 Uniprot:E9QJ97
Length = 1805
Score = 354 (129.7 bits), Expect = 5.2e-72, Sum P(6) = 5.2e-72
Identities = 130/435 (29%), Positives = 200/435 (45%)
Query: 104 GISFPLSYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGS 163
G P SY LV+ Y HI DH + SP R + + V +LLG+G
Sbjct: 53 GKEHPGSYENLVKLYRHISPDHLLQVCE-----RVSPLLER--EVPASVPGVNSLLGTGR 105
Query: 164 FSLLECDRSMKYKQVK--PLPAYLRWPHMQADQVHGLSLREIGGGFKKHHRAPSVCSACY 221
S+L ++S K+ K L A + + G S I H R + Y
Sbjct: 106 QSVLRTNKSCKHVVWKGSALAALHCGRPPEPPVIFG-SPPNIAETI--HSRR---LNGSY 159
Query: 222 AIAK--PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLA 279
+ + P+ + Q M+ K++ GH +VYC FDR+GR + TGSDD LVKIW+ + LA
Sbjct: 160 RLGQLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGHLLA 219
Query: 280 SCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRP 339
+ RGH +I+D+AV+ NTL+A+ S D +IRVW L P++VL GH ++T++ FSP
Sbjct: 220 TLRGHAAEISDMAVNYENTLLAAGSCDKMIRVWCLQTCAPLAVLEGHAASITSLQFSPLC 279
Query: 340 SAIYQLLSSSD-DGTCRIW--DARYSQYS--PRIYLPKPPDAITGKXXXXXXXXXXXXXX 394
S + LSS+ DGT W DAR ++ P ++ +P +
Sbjct: 280 SGNKRFLSSTGADGTICFWQWDARTLKFGQRPSKFIERPRPGV----------------- 322
Query: 395 LQSHQILCCAYNANGTVFVTGSSDTFARVW---SACKSSVEDSEQPIHELDVLS-GHEND 450
Q++C +++A G TGS+D RV+ + + E ++D + H D
Sbjct: 323 ----QMICSSFSAGGMFLATGSTDHIIRVYYFGGGQPEKISELESHTDKVDSIQFSHSGD 378
Query: 451 VNYVQFSGCAVAS---------RSAMSD-AFK----------EENVPKFKNS---WFCHD 487
+V S A RS + D A K E+ V K K + W C+D
Sbjct: 379 -RFVSGSRDGTARIWQLQQQDWRSILLDMATKLPGKYNPPPLEDKVTKLKVTMVAWDCND 437
Query: 488 N-IVTCSRDGSAIIW 501
N ++T + + + +W
Sbjct: 438 NTVITAANNLTLKVW 452
Score = 296 (109.3 bits), Expect = 5.2e-72, Sum P(6) = 5.2e-72
Identities = 65/158 (41%), Positives = 88/158 (55%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W ++ V+ A + + VWN+ G+L+H L GH +VL+ HPF+ R+ SAG
Sbjct: 428 VTMVAWDCNDNTVITAANNLTLKVWNSYTGNLIHVLMGHEDEVFVLEPHPFDSRVLFSAG 487
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG IVWD+ G IR Y I G + D K SPDG +D G + + G
Sbjct: 488 HDGNAIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSS 547
Query: 663 ESQKDAKYDQ-FFLGDYRPLIRDSLGNVLDQETQLVPH 699
S+ D DQ FF DYRPLIRD+ VLD++TQ PH
Sbjct: 548 -SRYDKIADQMFFHTDYRPLIRDAHNFVLDEQTQQAPH 584
Score = 219 (82.2 bits), Expect = 5.2e-72, Sum P(6) = 5.2e-72
Identities = 55/178 (30%), Positives = 86/178 (48%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
+ PQ+GDEV Y RQGH+ ++E ++ PW + + E K+V + Y
Sbjct: 942 FTPQMGDEVYYFRQGHEAYVEMAKKNKIFSINPKKQPWHKLE--LREQELLKIVGIKYEV 999
Query: 1482 FPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
G CC + L F+DP S L G +F + ++ D DF+V + +D A RNW D
Sbjct: 1000 --GLPTLCC-LKLAFLDPDSGKLTGGSFSIKYHDMPDVIDFLVLRQQFDNARQRNWMIGD 1056
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHD 1598
+ + +A WW G I + E+P+S + Y V + GD+ SPW+M +
Sbjct: 1057 RFRAVIDDA------WWFGTIESQEPYQAEYPDSLFQCYNVCWDNGDTEKMSPWDMEE 1108
Score = 114 (45.2 bits), Expect = 1.4e-20, Sum P(6) = 1.4e-20
Identities = 43/160 (26%), Positives = 69/160 (43%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S+ +A+ S D +IRV+ G P IS L HT V +I FS + +S S D
Sbjct: 330 SAGGMFLATGSTDHIIRVYYFGGGQPEKISELESHTDKVDSIQFSHSGD---RFVSGSRD 386
Query: 352 GTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTV 411
GT RIW + + R L + GK ++ A++ N
Sbjct: 387 GTARIWQLQQQDW--RSILLDMATKLPGKYNPPPLEDKVTKL-----KVTMVAWDCNDNT 439
Query: 412 FVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
+T +++ +VW++ ++ IH VL GHE++V
Sbjct: 440 VITAANNLTLKVWNSYTGNL------IH---VLMGHEDEV 470
Score = 96 (38.9 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 23/71 (32%), Positives = 34/71 (47%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A N+ V +A+N+ ++VW G I VL GH V + P P L S
Sbjct: 428 VTMVAWDCNDNTVITAANNLTLKVWNSYTGNLIHVLMGHEDEVFVL--EPHPFDSRVLFS 485
Query: 348 SSDDGTCRIWD 358
+ DG +WD
Sbjct: 486 AGHDGNAIVWD 496
Score = 82 (33.9 bits), Expect = 5.2e-72, Sum P(6) = 5.2e-72
Identities = 25/75 (33%), Positives = 32/75 (42%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDDGISFPLS 110
E+YFLI FL +GPCQ P+R W +G ++ P S
Sbjct: 14 ELYFLIARFLEAGPCQDAAETLIREVQQKELLPKRID-W-------TGKEH------PGS 59
Query: 111 YNKLVERYPHIEWDH 125
Y LV+ Y HI DH
Sbjct: 60 YENLVKLYRHISPDH 74
Score = 81 (33.6 bits), Expect = 5.0e-18, Sum P(5) = 5.0e-18
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GH+A + V+ N +A +
Sbjct: 186 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGHLLATLRGHAAEISDMAVNYENTLLA-AGS 244
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSP 640
D VW + P+ + E + +FSP
Sbjct: 245 CDKMIRVWCLQTCAPLAVLEGHAASITSLQFSP 277
Score = 74 (31.1 bits), Expect = 2.5e-17, Sum P(5) = 2.5e-17
Identities = 32/122 (26%), Positives = 47/122 (38%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF---NPRIAMSAGYDGRT 612
+N + A D I VW + + L GH+AS L P N R S G DG
Sbjct: 236 ENTLLAAGSCDKMIRVWCLQTCAPLAVLEGHAASITSLQFSPLCSGNKRFLSSTGADGTI 295
Query: 613 IVWDIWEGT-------PIRIYEIGR--FKLVDGKFSPDGTSIVL--SDDVGQIYLLNTGQ 661
W W+ P + E R +++ FS G + +D + ++Y GQ
Sbjct: 296 CFWQ-WDARTLKFGQRPSKFIERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYYFGGGQ 354
Query: 662 GE 663
E
Sbjct: 355 PE 356
Score = 69 (29.3 bits), Expect = 7.8e-17, Sum P(5) = 7.8e-17
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS-NNTLVASASNDFVI 309
+D + VIT +++ +K+W+ T + GHE ++ L ++ ++ SA +D
Sbjct: 433 WDCNDNTVITAANNLTLKVWNSYTGNLIHVLMGHEDEVFVLEPHPFDSRVLFSAGHDGNA 492
Query: 310 RVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
VW L G+ I +++ G GAV SP
Sbjct: 493 IVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSP 525
Score = 51 (23.0 bits), Expect = 5.2e-72, Sum P(6) = 5.2e-72
Identities = 12/45 (26%), Positives = 24/45 (53%)
Query: 1647 DYLNRFPVPL-YPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESY 1690
DYL+ P+ + V+ L Y ++ KD + ++ SN+++Y
Sbjct: 1343 DYLDIVDTPMDFGTVLNRLLAGEYDTPMDLCKD-VRLIFSNSKAY 1386
Score = 50 (22.7 bits), Expect = 1.1e-54, Sum P(6) = 1.1e-54
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 1035 VGLSQKHNRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSS 1086
+ L + F+D S DE D E A N+ + + + S RS S
Sbjct: 1255 IPLYNSMKKTAFSDSSDDEDEDEDEEHEAPCTSNRNKKQQQPMLRSLRSKPS 1306
Score = 48 (22.0 bits), Expect = 1.2e-71, Sum P(6) = 1.2e-71
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 1661 IRLRLVNNYYRSLEAAKDDINVMLSNAESY 1690
IR RL N +YR + + ++ + NA+++
Sbjct: 1195 IRQRLENRFYRRMSSLMWEVRYIEHNAQTF 1224
Score = 44 (20.5 bits), Expect = 4.6e-54, Sum P(6) = 4.6e-54
Identities = 18/75 (24%), Positives = 39/75 (52%)
Query: 1139 KFGSDALLDLASVRK--EELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRD 1196
KF SD +L + + + + +KK++ +S+ D +++D +E T+ R+
Sbjct: 1236 KFVSDLMLQFIKDQSCTDIIPLYNSMKKTAFSDSSD--DEDEDED---EEHEAPCTSNRN 1290
Query: 1197 ELKENPPLRVRIRTK 1211
+ ++ P LR +R+K
Sbjct: 1291 KKQQQPMLR-SLRSK 1304
Score = 44 (20.5 bits), Expect = 5.8e-54, Sum P(6) = 5.8e-54
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 1191 GTNYRDELKE-NPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESS 1246
G + L++ +P + + T + T+S + + + + D+ A+S P P+ ESS
Sbjct: 1483 GPSRAPSLRQTHPQINGKAETPVVPGRTRSSA--RFGSPITDVAPAQSAPPPLVESS 1537
Score = 39 (18.8 bits), Expect = 1.1e-54, Sum P(6) = 1.1e-54
Identities = 11/55 (20%), Positives = 19/55 (34%)
Query: 681 LIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEEPYQSMYQQRRLGALGIEW 735
++R N + + R + D I +EPYQ+ Y + W
Sbjct: 1039 VLRQQFDNARQRNWMIGDRFRAVIDDAWWFGTIESQEPYQAEYPDSLFQCYNVCW 1093
Score = 38 (18.4 bits), Expect = 5.2e-72, Sum P(6) = 5.2e-72
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 1122 NSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDD 1181
NS +S Y SD + +DA ++L +K + + + KK++S + D ++ D
Sbjct: 835 NSSSSDYS-----SDYSDWTADAGINLEPPKKTSVKKKK--KKNASSSEE---DGEKKKD 884
Query: 1182 VHKSRNED 1189
K R ++
Sbjct: 885 SKKERRKE 892
Score = 37 (18.1 bits), Expect = 2.0e-45, Sum P(6) = 2.0e-45
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 489 IVTCSRDGSAIIW 501
+ + DG+AI+W
Sbjct: 483 LFSAGHDGNAIVW 495
>UNIPROTKB|F1NXP9 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006606 "protein
import into nucleus" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008284 "positive regulation of
cell proliferation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0010800 "positive regulation
of peptidyl-threonine phosphorylation" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] [GO:0033138
"positive regulation of peptidyl-serine phosphorylation"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
GO:GO:0005634 GO:GO:0008286 GO:GO:0007010 GO:GO:0043066
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
GO:GO:0045944 GO:GO:0010800 GO:GO:0006606 GO:GO:0040008
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:AADN02002461 EMBL:AADN02002458 EMBL:AADN02002459
EMBL:AADN02002460 IPI:IPI00574522 Ensembl:ENSGALT00000025610
Uniprot:F1NXP9
Length = 1818
Score = 349 (127.9 bits), Expect = 5.0e-69, Sum P(4) = 5.0e-69
Identities = 107/328 (32%), Positives = 163/328 (49%)
Query: 104 GISFPLSYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGS 163
G P SY LV+ Y H+ DH ++ P + I + V TLLG+G
Sbjct: 43 GKEHPRSYQNLVKYYRHLAPDHLLQIC-----HRLGPLLEQ--EIPQSVPGVQTLLGAGR 95
Query: 164 FSLLECDRSMKYKQVKPLP-AYLRWPHMQADQV-HGLSLREIGGGFKKHHRAPSVCSACY 221
SLL ++S K+ K A L V +G + F + + Y
Sbjct: 96 QSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIVDTLFSRK------LNGKY 149
Query: 222 AIAK--PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLA 279
+ + P+ + Q M+ K++ GH +VYC FDR+GR + TGSDD LVKIW+ + LA
Sbjct: 150 RLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLA 209
Query: 280 SCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRP 339
+ RGH +I+D+AV+ NT++A+ S D +IRVW L P++VL+GH+ ++T++ FSP
Sbjct: 210 TLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLC 269
Query: 340 SAIYQLLSSSD-DGT-CR-IWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQ 396
S + LSS+ DGT C +WDA + +PR P T +
Sbjct: 270 SGSKRYLSSTGADGTICFWLWDAGTLKINPR------PTKFTERPRPGV----------- 312
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVW 424
Q++C +++A G TGS+D RV+
Sbjct: 313 --QMICSSFSAGGMFLATGSTDHIIRVY 338
Score = 312 (114.9 bits), Expect = 5.0e-69, Sum P(4) = 5.0e-69
Identities = 77/187 (41%), Positives = 100/187 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN+ G L+H L GH +VL+ HPF+PR+ SAG
Sbjct: 417 VTMVAWDRHDNSVITAVNNMTLKVWNSFTGQLIHILMGHEDEVFVLEPHPFDPRVLFSAG 476
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG IVWD+ G IR Y I G + D K SPDG +D G +LL G G
Sbjct: 477 HDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHG--HLLIFGFG 534
Query: 663 ESQK-DAKYDQ-FFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPY 719
S K D DQ FF DYRPLIRD+ VLD++TQ PH + P L D P+ Y
Sbjct: 535 SSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHL--MPPPFLVDVDGNPHPARY 592
Query: 720 QSMYQQR 726
Q + R
Sbjct: 593 QRLVPGR 599
Score = 208 (78.3 bits), Expect = 5.0e-69, Sum P(4) = 5.0e-69
Identities = 78/304 (25%), Positives = 134/304 (44%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDEV Y RQGH+ ++ ++ PW + + E K+V + Y
Sbjct: 948 FVPQMGDEVYYFRQGHEAYVVMAKKNKIYSINPKKQPWHKME--LREQELMKIVGIKYEV 1005
Query: 1482 FPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
G CC + L F+DP + L G +F + ++ D DF+V + +D A R W D
Sbjct: 1006 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKHRRWNIGD 1062
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMH--D 1598
+ +R+ + WW G I + ++P+S + Y V + GD+ SPW+M
Sbjct: 1063 R----FRSVIDDA--WWFGTIESQEPLQPDYPDSLFQCYNVCWDNGDTEKMSPWDMELIP 1116
Query: 1599 PNVMWEH------PEIDSESRDKLLSSFNKLEQSVSRKQDYYGI-QRLNEAAQKLDYLNR 1651
N ++ P D E R L + S +R Q+ I +N+ LD +
Sbjct: 1117 TNAVFPEELGTSVPLTDEERRTLLYKPLDGEWGSRTRDQECDRIIAGINQL-MTLDIASA 1175
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKN-AALSAKVERLRDWFNR 1710
F P+ + + Y ++ A D++ + ES F + ++L +V R + R
Sbjct: 1176 FVAPVDLQAYPM------YCTVVAYPTDLSTIKQRLESRFYRRLSSLMWEV-RYIEHNTR 1228
Query: 1711 TLNK 1714
T N+
Sbjct: 1229 TFNE 1232
Score = 100 (40.3 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 27/73 (36%), Positives = 38/73 (52%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S+ +A+ S D +IRV+ G P IS L HT V +I FS S + +S S D
Sbjct: 320 SAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNSSS---RFVSGSRD 376
Query: 352 GTCRIWDARYSQY 364
GT RIW + ++
Sbjct: 377 GTARIWQFKRREW 389
Score = 84 (34.6 bits), Expect = 7.8e-15, Sum P(2) = 7.8e-15
Identities = 21/71 (29%), Positives = 33/71 (46%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A ++ V +A N+ ++VW G I +L GH V + P P L S
Sbjct: 417 VTMVAWDRHDNSVITAVNNMTLKVWNSFTGQLIHILMGHEDEVFVL--EPHPFDPRVLFS 474
Query: 348 SSDDGTCRIWD 358
+ DG +WD
Sbjct: 475 AGHDGNVIVWD 485
Score = 80 (33.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GH+A + V+ N IA +
Sbjct: 176 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA-AGS 234
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSP 640
D VW + P+ + + + +FSP
Sbjct: 235 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSP 267
Score = 77 (32.2 bits), Expect = 3.6e-41, Sum P(3) = 3.6e-41
Identities = 15/68 (22%), Positives = 33/68 (48%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAVSSNNTLVASASN 305
C+ F G F+ TGS D +++++ + ++ H + + S++++ S S
Sbjct: 316 CSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNSSSRFVSGSR 375
Query: 306 DFVIRVWR 313
D R+W+
Sbjct: 376 DGTARIWQ 383
Score = 73 (30.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 27/93 (29%), Positives = 43/93 (46%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA-SASNDFVI 309
+DR VIT ++ +K+W+ T + GHE ++ L + V SA +D +
Sbjct: 422 WDRHDNSVITAVNNMTLKVWNSFTGQLIHILMGHEDEVFVLEPHPFDPRVLFSAGHDGNV 481
Query: 310 RVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
VW L G+ I +++ G GAV SP
Sbjct: 482 IVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSP 514
Score = 64 (27.6 bits), Expect = 8.0e-40, Sum P(3) = 8.0e-40
Identities = 24/76 (31%), Positives = 32/76 (42%)
Query: 395 LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H +I A N T+ GS D RVW C + P L VL GH +
Sbjct: 211 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVW--CLRTCA----P---LAVLQGHSASIT 261
Query: 453 YVQFSGCAVASRSAMS 468
+QFS S+ +S
Sbjct: 262 SLQFSPLCSGSKRYLS 277
Score = 53 (23.7 bits), Expect = 5.5e-52, Sum P(5) = 5.5e-52
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYF-IKNAALSAKVERL 1704
DY + P+ +R L NY +E KD + ++ SN+++Y K + + + RL
Sbjct: 1345 DYRDIIDTPMDFATVRETLEAGNYESPMELCKD-VRLIFSNSKAYTPSKRSRIYSMSLRL 1403
Query: 1705 RDWFNRTLNKL 1715
+F ++ +
Sbjct: 1404 SAFFEEHISSI 1414
Score = 51 (23.0 bits), Expect = 1.8e-38, Sum P(3) = 1.8e-38
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C ++ G TGS D ++W+
Sbjct: 176 VYCVTFDRTGRRIFTGSDDCLVKIWA 201
Score = 46 (21.3 bits), Expect = 5.0e-69, Sum P(4) = 5.0e-69
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 405 YNANGTVFVTGSSDTFARVW 424
++ + + FV+GS D AR+W
Sbjct: 363 FSNSSSRFVSGSRDGTARIW 382
Score = 42 (19.8 bits), Expect = 9.4e-51, Sum P(5) = 9.4e-51
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 963 SQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGTT 1013
S + + RKR ++K L+ A S V+ + P +G T+
Sbjct: 1446 SVASSPERKRRLIKPQLKGEPSASSSSSVSVRSTALRHAPPQMNGKAAETS 1496
Score = 40 (19.1 bits), Expect = 5.5e-52, Sum P(5) = 5.5e-52
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 1170 STPLVDHQQNDDVHKSRNEDVGTNYRDE 1197
S PL D ++ ++K + + G+ RD+
Sbjct: 1128 SVPLTDEERRTLLYKPLDGEWGSRTRDQ 1155
Score = 39 (18.8 bits), Expect = 7.0e-52, Sum P(5) = 7.0e-52
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1550 NGEGGTWWKGRITKSQAKSEEFPNSP 1575
+GE GT RI+++ S +SP
Sbjct: 649 SGEAGTSSTSRISRASVSSTSEVHSP 674
Score = 39 (18.8 bits), Expect = 9.4e-51, Sum P(5) = 9.4e-51
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 1207 RIRTKGILRDTKSPSEQKS-STSVKDLPSAESDPIPMSESSLCMEGNLMSEVPEEAEGYG 1265
++ + ++ TK E+ S ST+ L +E++ M E + +G P+
Sbjct: 1669 KVAEQNTVQTTKDVLEEASASTACNSL--SENN---MKEDLVQKKGR-GGRKPKRKIKTH 1722
Query: 1266 RSSSDQLLNSNLKFKVRDGSK 1286
S SD L+ +N+K + R K
Sbjct: 1723 PSGSDLLIPANVKMQTRSRRK 1743
Score = 38 (18.4 bits), Expect = 1.9e-50, Sum P(5) = 1.9e-50
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 1465 YISAVETCKVVNLVYA 1480
Y S +E CK V L+++
Sbjct: 1368 YESPMELCKDVRLIFS 1383
>FB|FBgn0011785 [details] [associations]
symbol:BRWD3 "BRWD3" species:7227 "Drosophila melanogaster"
[GO:0046427 "positive regulation of JAK-STAT cascade" evidence=IGI]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0007095
"mitotic G2 DNA damage checkpoint" evidence=IGI] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
EMBL:AE014297 GO:GO:0007095 GO:GO:0006911 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0046427 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HSSP:Q92793
FlyBase:FBgn0011785 RefSeq:NP_732982.1 UniGene:Dm.5099
ProteinModelPortal:Q9VC96 SMR:Q9VC96 IntAct:Q9VC96 STRING:Q9VC96
EnsemblMetazoa:FBtr0084604 GeneID:42898 KEGG:dme:Dmel_CG31132
UCSC:CG31132-RA InParanoid:Q9VC96 OMA:KSRFENH PhylomeDB:Q9VC96
GenomeRNAi:42898 NextBio:831161 ArrayExpress:Q9VC96 Bgee:Q9VC96
Uniprot:Q9VC96
Length = 2232
Score = 327 (120.2 bits), Expect = 1.8e-68, Sum P(7) = 1.8e-68
Identities = 113/435 (25%), Positives = 196/435 (45%)
Query: 110 SYNKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGSFSLLE- 168
++ +L +Y HI +H + P R + P+ + +LLG+G +LL
Sbjct: 60 TFEELERKYKHIGANHLLEICS-----RLGPLVDR--ELPPSVPGINSLLGTGRQNLLRT 112
Query: 169 -----CDRSMKYKQVK----PLP-AYLRWPHMQADQVHGLSLREIGGGFKKHHRAPSVCS 218
C RS++ + LP + L P D+V L+ RE GG ++
Sbjct: 113 KETVYCHRSLRDYCTRLNGVSLPDSVLTKPTHNLDRV--LTGREHGGEVRRK-------- 162
Query: 219 ACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCL 278
+ P+ + ++ + +++ GH +VYC +FDR+GR++ITG+DD L+KIWS L
Sbjct: 163 ----LLVPTDLYRRTKLLRRTVGHLSSVYCVLFDRTGRYIITGADDLLIKIWSAADGRLL 218
Query: 279 ASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPR 338
A+ RG +ITD+A++ +NT++A+ S D ++RVW + PI+VL HTG +T++ F P
Sbjct: 219 ATLRGASSEITDIAINLDNTMLAAGSLDHILRVWDMQTTSPIAVLSAHTGMITSVNFCPS 278
Query: 339 P-SAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQS 397
P S + L+++S DG+ W + + PKP
Sbjct: 279 PRSDLKYLVTTSTDGSIAFWQYSTPRGQKITFAPKPTQ-------------YHEKLRPGQ 325
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVW----SACKSSVE--------DSEQPIHE-LDVL 444
Q++C ++ G GS+D RV+ K +E DS Q H L +
Sbjct: 326 AQMMCTTFSPGGIFLAAGSADHHVRVYMMGEDGPKRILETEAYTDAVDSVQWSHRGLRFI 385
Query: 445 SGHENDVNYV------QFSGCAVASRSAMSDAFKEENVPKFKNS---WFCHDN-IVTCSR 494
SG ++ ++ Q+ + ++ + E + K + W D ++T
Sbjct: 386 SGSKDGTAHIWTFESQQWKSSKLCMTERLASCPEPEEGKRLKVTMVAWDASDRYVITAVN 445
Query: 495 DGSAIIWIPRSRRSH 509
D + IW +S + H
Sbjct: 446 DFTIKIWDSKSAKLH 460
Score = 276 (102.2 bits), Expect = 1.8e-68, Sum P(7) = 1.8e-68
Identities = 67/207 (32%), Positives = 110/207 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W +R+V+ A+ D I +W++ L L GH YVL+ +P + + +SAG
Sbjct: 428 VTMVAWDASDRYVITAVNDFTIKIWDSKSAKLHRVLRGHKDELYVLESNPRDEHVLLSAG 487
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG+ +WDI +G + + +I G + D K+SPDGT I +D G I + G
Sbjct: 488 HDGQVFLWDIEQGVCVANFLNDIDGQGHGSVFDAKWSPDGTMIAATDSHGHILIFGLGVC 547
Query: 663 -ESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPYQ 720
E K + FF D+RPL+RD+ +V+D++TQ++PH + P L D+ P+ +Q
Sbjct: 548 IEKYKMLPTELFFHTDFRPLLRDAQHHVVDEQTQIMPHL--MPPPFLVDADGNPHPSRFQ 605
Query: 721 SMYQQRRLGALGIEWRPSSIKLAIGLD 747
R +L + P+ L +G+D
Sbjct: 606 RFVPGRESCSLD-QLIPN---LTVGVD 628
Score = 225 (84.3 bits), Expect = 1.8e-68, Sum P(7) = 1.8e-68
Identities = 55/178 (30%), Positives = 91/178 (51%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGY-ISAVETCKVVNLVYA 1480
Y PQ+GDEV+Y RQGH +++++ ++V PW N + + E +V+ + Y
Sbjct: 1006 YYPQMGDEVVYFRQGHAKYLDAVRLKKVYKLSHSSEPW---NFHTLRDHELVRVIGIKYE 1062
Query: 1481 TFPGSGDSCCKITLKFVDPSSSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
P CC + L +D ++ G FK+ ++ D DF+V + +D A+ RNW+ D
Sbjct: 1063 IRPPR--LCC-LKLAIIDEEGNMTGTTFKIKYHDMPDVLDFLVLRQTFDLAVQRNWSIGD 1119
Query: 1541 K--CQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEM 1596
+ C I +G WW G+I A S +FP+S + + V + G+ SPW+M
Sbjct: 1120 RFRCMI----VDG----WWMGQIESRHALSADFPDSSFMCFRVRWDNGEYEFMSPWDM 1169
Score = 130 (50.8 bits), Expect = 1.2e-24, Sum P(6) = 1.2e-24
Identities = 42/139 (30%), Positives = 63/139 (45%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETA------FC----LASC-R 282
+ I + + DAV + G I+GS D IW+ E+ C LASC
Sbjct: 360 KRILETEAYTDAVDSVQWSHRGLRFISGSKDGTAHIWTFESQQWKSSKLCMTERLASCPE 419
Query: 283 GHEGD---ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRP 339
EG +T +A +++ V +A NDF I++W VLRGH + + +PR
Sbjct: 420 PEEGKRLKVTMVAWDASDRYVITAVNDFTIKIWDSKSAKLHRVLRGHKDELYVLESNPRD 479
Query: 340 SAIYQLLSSSDDGTCRIWD 358
+ LLS+ DG +WD
Sbjct: 480 EHV--LLSAGHDGQVFLWD 496
Score = 94 (38.1 bits), Expect = 4.5e-21, Sum P(6) = 4.5e-21
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT-L 299
G R V +D S R+VIT +D +KIW ++A RGH+ ++ L + + +
Sbjct: 423 GKRLKVTMVAWDASDRYVITAVNDFTIKIWDSKSAKLHRVLRGHKDELYVLESNPRDEHV 482
Query: 300 VASASNDFVIRVWRLPDGLPISVL------RGHTGAVTAIAFSP 337
+ SA +D + +W + G+ ++ +GH G+V +SP
Sbjct: 483 LLSAGHDGQVFLWDIEQGVCVANFLNDIDGQGH-GSVFDAKWSP 525
Score = 89 (36.4 bits), Expect = 1.4e-20, Sum P(6) = 1.4e-20
Identities = 26/98 (26%), Positives = 44/98 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ R+++ D I +W+A DG L+ +L G ASS + D+ ++AG
Sbjct: 186 VYCVLFDRTGRYIITGADDLLIKIWSAADGRLLATLRG--ASSEITDIAINLDNTMLAAG 243
Query: 608 -YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTS 644
D VWD+ +PI + + F P S
Sbjct: 244 SLDHILRVWDMQTTSPIAVLSAHTGMITSVNFCPSPRS 281
Score = 78 (32.5 bits), Expect = 1.8e-68, Sum P(7) = 1.8e-68
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 1648 YLNRFPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAAL 1697
YL +P+ L I+ R N++YR + +A+ D+ + +NAE Y ++A +
Sbjct: 1246 YLIEYPIDL--TTIKSRFENHFYRRITSAQFDVRYLATNAEQYNRRHAII 1293
Score = 71 (30.1 bits), Expect = 1.8e-68, Sum P(7) = 1.8e-68
Identities = 26/90 (28%), Positives = 39/90 (43%)
Query: 37 MVANQVVEADVDLR-EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGV 95
M Q D DL+ E+YFLI FL++GP + T PRR W
Sbjct: 1 METRQPSSGD-DLKPELYFLISKFLAAGPLEETAKVLIRELEEKKVLPRRLD-W------ 52
Query: 96 NSGNDNDDGISFPLSYNKLVERYPHIEWDH 125
GN+++ ++ +L +Y HI +H
Sbjct: 53 -QGNEHEQ------TFEELERKYKHIGANH 75
Score = 56 (24.8 bits), Expect = 3.8e-48, Sum P(5) = 3.8e-48
Identities = 46/189 (24%), Positives = 80/189 (42%)
Query: 1217 TKSPSEQKSSTSVKDLPSAESDPIPMSESSLCMEG-NLMSEVPEEAEGYGRSSSDQLLNS 1275
T+ S +++ +V S+ S+ + S ++ G + SE EE E +++SD +
Sbjct: 1557 TRGRSRRRNGVAVS-ASSSGSNRVTSSSAAQQRRGKSSSSEEEEEEETSAQATSDASSDE 1615
Query: 1276 NLKFKVRDGSKSSYKTRTDIE----AFDGGM---EDGIN-HEASGIDS-PEAAS-GSIRK 1325
+ + D S +TR + + D + ED N +E G P AA S R+
Sbjct: 1616 EERAQSNDSSPQQTRTRRARQRQRLSDDSNINDSEDSYNPNEGRGSRRRPGAARPSSNRQ 1675
Query: 1326 TR--SMKMKIISREPI-AANCNFKSKNGHDLVGTSKTVGNSSMEAHDEFFPEEWIPTSTV 1382
T S K + +++ P AA + + G+S S + HDE + I
Sbjct: 1676 TNGHSSKRRRLNKSPANAAPGPSLPRRTRRIAGSSAEEAASHSQ-HDESTQDSQIGRR-- 1732
Query: 1383 KSRPRSTRN 1391
K R S+R+
Sbjct: 1733 KGRSASSRS 1741
Score = 52 (23.4 bits), Expect = 8.1e-66, Sum P(7) = 8.1e-66
Identities = 18/64 (28%), Positives = 31/64 (48%)
Query: 1647 DYLNRFPVPLYPEVIRLRLVN-NYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DYL P+ ++ L+ NY L+ AKD + ++ N+++Y K + + A RL
Sbjct: 1407 DYLEIIATPMDLRTVKEDLLGGNYDDPLDFAKD-VRLIFQNSKNYNTNKRSRIYAMTLRL 1465
Query: 1705 RDWF 1708
F
Sbjct: 1466 SALF 1469
Score = 49 (22.3 bits), Expect = 6.1e-48, Sum P(5) = 6.1e-48
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 921 DSHVQSKEDDRNLQNMQQQHKREEEQTIVESE 952
D+H S+E R+ + ++ + EE+ T V+SE
Sbjct: 2178 DAHASSQE--RSQASTERDQEEEEDGTSVDSE 2207
Score = 44 (20.5 bits), Expect = 1.8e-68, Sum P(7) = 1.8e-68
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 999 AKLPQSSSGPPQGTTERKID 1018
A LP +++G PQG ID
Sbjct: 653 AALPPAAAGGPQGANYSHID 672
Score = 44 (20.5 bits), Expect = 6.1e-48, Sum P(5) = 6.1e-48
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 832 ELKTSSGRRVRKRNLDERDGSASGSNR 858
E + S+ R R+RN S+SGSNR
Sbjct: 1552 EEEASTRGRSRRRNGVAVSASSSGSNR 1578
Score = 41 (19.5 bits), Expect = 3.2e-46, Sum P(6) = 3.2e-46
Identities = 22/109 (20%), Positives = 40/109 (36%)
Query: 925 QSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKK 984
Q DD N+ + + + E + +P ++ + R+RL +
Sbjct: 1638 QRLSDDSNINDSEDSYNPNEGRGSRRRPGAARPSSNRQTNGHSSKRRRLNKSPANAAPGP 1697
Query: 985 ALSLEDTRVKGDDMAKLPQSSSGPPQGTTERKIDLSLKEPGSS-SAGSG 1032
+L R+ G A+ S S + T + +I SS S G+G
Sbjct: 1698 SLPRRTRRIAGSS-AEEAASHSQHDESTQDSQIGRRKGRSASSRSIGNG 1745
Score = 40 (19.1 bits), Expect = 1.8e-68, Sum P(7) = 1.8e-68
Identities = 17/71 (23%), Positives = 33/71 (46%)
Query: 1132 RSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVG 1191
R+ D+E D ++A +EE ED+ +SS T + ++N + +E
Sbjct: 863 RAVRDQEPEHYD---EVAPPPEEE---EEDVSSNSS-GDTSYSNVEENLEDSSDESETDS 915
Query: 1192 TNYRDELKENP 1202
++Y D + + P
Sbjct: 916 SDYSDWVADTP 926
Score = 39 (18.8 bits), Expect = 2.2e-68, Sum P(7) = 2.2e-68
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 1259 EEAEGYGRSSSDQLLNSNLKFKVRDGSKSSYKTRTD 1294
EE E +SS SN++ + D S S +D
Sbjct: 882 EEEEDVSSNSSGDTSYSNVEENLEDSSDESETDSSD 917
Score = 39 (18.8 bits), Expect = 1.5e-49, Sum P(7) = 1.5e-49
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 1385 RPRSTRNRRGDHDGHPC--LLSGRKSNFPVRKLSWLMLSEH 1423
+P+S RGD DG C +++G + V +LS ++EH
Sbjct: 1198 QPKSEEWHRGDRDG-TCRRIINGLEQ---VMRLS---IAEH 1231
Score = 39 (18.8 bits), Expect = 3.8e-48, Sum P(5) = 3.8e-48
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 775 PVYWEPENEVISDDNDSEYNIAEECASEAEQGR 807
PV E+E DD+D + + EE AS + R
Sbjct: 1530 PVANSSEDEDEEDDDDDDDDDDEEEASTRGRSR 1562
Score = 39 (18.8 bits), Expect = 2.0e-47, Sum P(5) = 2.0e-47
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 780 PENEVISDDNDSEYNIAEECASEAEQG 806
P N I++DND + + + A +G
Sbjct: 2114 PSNNSIANDNDDDDDYVVPRSRRANRG 2140
Score = 39 (18.8 bits), Expect = 5.1e-46, Sum P(6) = 5.1e-46
Identities = 12/54 (22%), Positives = 22/54 (40%)
Query: 963 SQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGTTERK 1016
+ S ++R S + ++ S + T D + QS+ PQ T R+
Sbjct: 1580 TSSSAAQQRRGKSSSSEEEEEEETSAQATSDASSDEEERAQSNDSSPQQTRTRR 1633
Score = 38 (18.4 bits), Expect = 3.2e-46, Sum P(6) = 3.2e-46
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 1259 EEAEGYGRSSSDQLLNSNLKFKVRDGSKSSYKTR 1292
EE +G S +Q +N + + +VR K S K R
Sbjct: 2197 EEEDGTSVDSEEQQVNVSSRGRVR---KPSAKAR 2227
Score = 38 (18.4 bits), Expect = 6.4e-46, Sum P(6) = 6.4e-46
Identities = 62/324 (19%), Positives = 118/324 (36%)
Query: 970 RKRLVLKLSLRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGTTERKIDLSLKEPGSSSA 1029
R+RL ++ D + + + + R SS+ G + ++ L+ K P +++
Sbjct: 1637 RQRLSDDSNINDSEDSYNPNEGRGSRRRPGAARPSSNRQTNGHSSKRRRLN-KSPANAAP 1695
Query: 1030 GSGIDVGLSQKHNRIVFADGSQDEKYDSQLEESAGDME---NKTRWAEVKI-----RTSK 1081
G + + R + +++ SQ +ES D + K R A + TS
Sbjct: 1696 GPSLP-----RRTRRIAGSSAEEAASHSQHDESTQDSQIGRRKGRSASSRSIGNGPSTSA 1750
Query: 1082 RSSSSGVLLPPDANFDVH----NDSIGDVN-RCVKLENGHGKFSSNSETSCYGCVRSCSD 1136
++++ L P N + + +G N L +G+ + S +R
Sbjct: 1751 AAAANSSLESPSRNTRANGTRTSSHLGAENDHSYHLPVRNGRIIESDTDS--PVIRPTRQ 1808
Query: 1137 KEKFGSDALLDL---ASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTN 1193
K AL+D + + +EE ED +++ TP D + G +
Sbjct: 1809 SAK---RALMDWGRGSDIEEEEEEEEEDSEEAEEILPTPTKDDLPSTSRAALAQAAAGPS 1865
Query: 1194 YRDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDL--PSAESDPIPMSESSLCMEG 1251
+L+ N VR D S +E ++ K+ P+ S ++ L +
Sbjct: 1866 R--QLRTNRNTVVRPAQSDDDDDDDSDNEPLANNQQKNYQSPAKSSSTATVAPHPLSLRR 1923
Query: 1252 NLMSEVPEEAEGYGRSSSDQLLNS 1275
L S PE RS + +S
Sbjct: 1924 RLASP-PERNTHMTRSHATSTTSS 1946
>MGI|MGI:3029414 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:3029414 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HOVERGEN:HBG108248
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AK050539
EMBL:AK139563 EMBL:AK163354 EMBL:BX000698 EMBL:AL731764
EMBL:BC082562 IPI:IPI00652540 IPI:IPI00660178 IPI:IPI00750468
RefSeq:NP_001074946.1 UniGene:Mm.100112 UniGene:Mm.426127
ProteinModelPortal:A2AHJ4 SMR:A2AHJ4 PhosphoSite:A2AHJ4
PRIDE:A2AHJ4 Ensembl:ENSMUST00000101283 Ensembl:ENSMUST00000150434
GeneID:382236 KEGG:mmu:382236 UCSC:uc009ucm.1 UCSC:uc009ucn.1
HOGENOM:HOG000203884 InParanoid:A2AHJ4 ChiTaRS:BRWD3 NextBio:403145
Bgee:A2AHJ4 CleanEx:MM_BRWD3 Genevestigator:A2AHJ4 Uniprot:A2AHJ4
Length = 1799
Score = 308 (113.5 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 62/142 (43%), Positives = 91/142 (64%)
Query: 217 CSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAF 276
CS ++ PS+ Q ++ K++ GH +VYC FDRSGR + TGSDD LVKIW+ +
Sbjct: 155 CSR-FSHVFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGR 213
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
LA+ RGH +I+D+AV+ NTL+A+ S D V+RVW L P++VL+GH+ ++T+I F
Sbjct: 214 LLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFC 273
Query: 337 PRPSAIYQLLSSSD-DGTCRIW 357
P + L+S+ DGT W
Sbjct: 274 PSTKGTTRYLTSTGADGTICFW 295
Score = 308 (113.5 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 70/185 (37%), Positives = 99/185 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN+V G L+H+L+GH +VL+ HPF+ RI +SAG
Sbjct: 426 VTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAG 485
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG +WD+ GT IR Y I G + D KFSPDG +D G + L G
Sbjct: 486 HDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCS 545
Query: 663 ESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPYQS 721
+ + FF DYRPLIRD+ VLD++TQ PH + P L D P+ +Q
Sbjct: 546 KYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHL--MPPPFLVDVDGNPHPTKFQR 603
Query: 722 MYQQR 726
+ R
Sbjct: 604 LVPGR 608
Score = 228 (85.3 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 80/304 (26%), Positives = 142/304 (46%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDE+IY RQGH+ ++ + ++ PW ++ + E K+V + Y
Sbjct: 936 FVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWNKMD--LREQEFVKIVGIKYEI 993
Query: 1482 FPGSGDSCCKITLKFVDP-SSSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
P + CC + L F+DP S + G++F + ++ D DF+V Y+ A RNW D
Sbjct: 994 GPPT--LCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGD 1050
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHD-P 1599
+ +R+ + WW G + Q E+P+S + Y V + + SPW+M P
Sbjct: 1051 R----FRSIIDDA--WWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIP 1104
Query: 1600 NVMWEHPEIDSE---SRDKLLSSFNKLEQSV----SRKQDYYG-IQRLNEAAQKLDYLNR 1651
+ E+ + S+++L + K ++ SR ++ IQ +N LD+ +
Sbjct: 1105 DGTAFPDEVGAGIPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINNLLS-LDFASP 1163
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKN-AALSAKVERLRDWFNR 1710
F VP+ L Y ++ A D+N + E+ F + +AL +V R + R
Sbjct: 1164 FAVPVDLSAYPL------YCTVVAYPTDLNTIKQRLENRFYRRISALMWEV-RYIEHNAR 1216
Query: 1711 TLNK 1714
T N+
Sbjct: 1217 TFNE 1220
Score = 110 (43.8 bits), Expect = 4.0e-21, Sum P(4) = 4.0e-21
Identities = 44/182 (24%), Positives = 75/182 (41%)
Query: 282 RGHEG-DITDLAVSSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPR 338
R G I+ + SS + + S D VIR++ L +P I+ L HT V A+ F
Sbjct: 314 RSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNN 373
Query: 339 PSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
++ + +S S DGT RIW + ++ I L D T L+
Sbjct: 374 GDSL-RFVSGSRDGTARIWQYQQQEWKS-IVL----DMATKMSGNNLTSAEDKVTKLK-- 425
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH--ELDVLSGHENDVNYVQF 456
+ A++ T +T ++ +VW++ + + H E+ VL H D +
Sbjct: 426 -VTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSG-HDDEVFVLEAHPFDQRIILS 483
Query: 457 SG 458
+G
Sbjct: 484 AG 485
Score = 93 (37.8 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A +T V +A N+F+++VW G + L GH V + P I +LS
Sbjct: 426 VTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRI--ILS 483
Query: 348 SSDDGTCRIWD 358
+ DG IWD
Sbjct: 484 AGHDGNIFIWD 494
Score = 92 (37.4 bits), Expect = 2.7e-19, Sum P(4) = 2.7e-19
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL-AVSSNNTLVASASNDFVI 309
+DR VIT ++ L+K+W+ T L + GH+ ++ L A + ++ SA +D I
Sbjct: 431 WDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNI 490
Query: 310 RVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
+W L G I +++ G GAV FSP
Sbjct: 491 FIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSP 523
Score = 81 (33.6 bits), Expect = 3.5e-18, Sum P(4) = 3.5e-18
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GHSA + V+ N IA AG
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 240
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPD--GTSIVLS 648
+ + VW + P+ + + + +F P GT+ L+
Sbjct: 241 SCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLT 284
Score = 78 (32.5 bits), Expect = 1.2e-44, Sum P(5) = 1.2e-44
Identities = 18/72 (25%), Positives = 33/72 (45%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSM--ETAFCLASCRGHEGDITDLAVSSNNTLV--A 301
+ C+ F G F+ TGS D +++I+ + E +A H + + +N +
Sbjct: 321 ISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNNGDSLRFV 380
Query: 302 SASNDFVIRVWR 313
S S D R+W+
Sbjct: 381 SGSRDGTARIWQ 392
Score = 67 (28.6 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGND 100
E+Y+LI FL SGPC ++ PRR W + S D
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-WEGKEHRRSFED 59
Score = 57 (25.1 bits), Expect = 1.7e-42, Sum P(5) = 1.7e-42
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 222 SAEISDMAVNYENTLIAAGSCDKVVRVW--CLRTCA----PVA---VLQGHSASITSIQF 272
Score = 56 (24.8 bits), Expect = 2.2e-42, Sum P(5) = 2.2e-42
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ +G TGS D ++W+
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWA 208
Score = 50 (22.7 bits), Expect = 1.1e-41, Sum P(4) = 1.1e-41
Identities = 35/139 (25%), Positives = 54/139 (38%)
Query: 657 LNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYE 716
LN+G Q++ + + GD + SL V ++ P +RN P C S+ +
Sbjct: 737 LNSGVSRVQEECRNAK---GD----LEVSLYTVEKKKKPSYPIQRNDYQPSCGRSLRRTQ 789
Query: 717 EPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDPV 776
Q Y R IE + G+ +D ED E + DPV
Sbjct: 790 RKRQHTYLTRS----NIEHNSQASSQTSGVQ----EDSDSSSEED-ETVGTSDASVEDPV 840
Query: 777 Y-WEPENEVISDDNDSEYN 794
W+ E+ S D+ SEY+
Sbjct: 841 VEWQSESS--SSDSSSEYS 857
Score = 49 (22.3 bits), Expect = 2.3e-68, Sum P(5) = 2.3e-68
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 1209 RTKGILRDTKSPSEQKSSTSVKDLPSAESDPIP--MSESS 1246
+T G+ D+ S SE+ + D S E DP+ SESS
Sbjct: 811 QTSGVQEDSDSSSEEDETVGTSDA-SVE-DPVVEWQSESS 848
Score = 49 (22.3 bits), Expect = 7.1e-50, Sum P(4) = 7.1e-50
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 924 VQSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGN 969
+ + E+D ++ +++ K +EQ + S G+ L S+S +G+
Sbjct: 1573 LSASEEDESMGGEEKEMKETKEQVHLSSSESGELGSSLSSESTSGS 1618
Score = 44 (20.5 bits), Expect = 2.3e-49, Sum P(5) = 2.3e-49
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 1647 DYLNRFPVPLYPEVIRLRLVN-NYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ ++ L + NY LE KD + + SN+++Y K + + + RL
Sbjct: 1358 DYQDGIDTPMDFSTVKETLESGNYDSPLEFYKD-VRQIFSNSKAYTSNKKSRIYSMTLRL 1416
Query: 1705 RDWFNRTLNKL 1715
F + +
Sbjct: 1417 SALFENHIKNI 1427
Score = 43 (20.2 bits), Expect = 9.8e-68, Sum P(5) = 9.8e-68
Identities = 25/117 (21%), Positives = 54/117 (46%)
Query: 1070 TRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIGDVNRCVKLENGHGKFSSNSETSCYG 1129
TR + ++ + S +SGV D++ + ++++G + V E+ ++ S S +S
Sbjct: 798 TR-SNIEHNSQASSQTSGVQEDSDSSSE-EDETVGTSDASV--EDPVVEWQSESSSS--- 850
Query: 1130 CVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSR 1186
S S+ + +DA ++L +++ + I SS + L D Q+ K +
Sbjct: 851 --DSSSEYSDWIADAGINLQPPKRQTRQATQKIYSSSEDENLKLEDRQKKPKQTKKK 905
Score = 39 (18.8 bits), Expect = 3.2e-22, Sum P(3) = 3.2e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 501 WIPRSRRSHGKVGRWTR 517
W R G+ GRW R
Sbjct: 1662 WKTRGTGGRGRWGRWGR 1678
>UNIPROTKB|F1MPF7 [details] [associations]
symbol:PHIP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0040008
"regulation of growth" evidence=IEA] [GO:0033138 "positive
regulation of peptidyl-serine phosphorylation" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA]
[GO:0010800 "positive regulation of peptidyl-threonine
phosphorylation" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0006606 "protein import into
nucleus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008284 GO:GO:0045944 GO:GO:0010800 GO:GO:0006606
GO:GO:0040008 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0033138
GO:GO:0022604 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 OMA:PGTIQVN
EMBL:DAAA02025391 IPI:IPI00686987 Ensembl:ENSBTAT00000034372
Uniprot:F1MPF7
Length = 1759
Score = 328 (120.5 bits), Expect = 5.7e-68, Sum P(6) = 5.7e-68
Identities = 95/283 (33%), Positives = 145/283 (51%)
Query: 148 IAPNAADVPTLLGSGSFSLLECDRSMKYKQVKPLP-AYLRWPHMQADQVHGLSLREIGGG 206
I + V TLLG+G SLL ++S K+ K A L ++ S I
Sbjct: 27 IPQSVPGVQTLLGAGRQSLLRTNKSCKHVVWKGSALAALHCGRPPESPINYGSPPSIADT 86
Query: 207 FKKHHRAPSVCSACYAIAK--PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDD 264
+ Y + + P+ + Q M+ K++ GH +VYC FDR+GR + TGSDD
Sbjct: 87 LFSRK-----LNGKYRLERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDD 141
Query: 265 RLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLR 324
LVKIW+ + LA+ RGH +I+D+AV+ NT++A+ S D +IRVW L P++VL+
Sbjct: 142 CLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQ 201
Query: 325 GHTGAVTAIAFSPRPSAIYQLLSSSD-DGT-CR-IWDARYSQYSPRIYLPKPPDAITGKX 381
GH+ ++T++ FSP S + LSS+ DGT C +WDA + +PR P T +
Sbjct: 202 GHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPR------PAKFTERP 255
Query: 382 XXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVW 424
Q++C +++A G TGS+D RV+
Sbjct: 256 RPGV-------------QMICSSFSAGGMFLATGSTDHIIRVY 285
Score = 313 (115.2 bits), Expect = 5.7e-68, Sum P(6) = 5.7e-68
Identities = 77/187 (41%), Positives = 100/187 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN+ G L+H L GH +VL+ HPF+PR+ SAG
Sbjct: 364 VTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAG 423
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG IVWD+ G IR Y I G + D K SPDG +D G +LL G G
Sbjct: 424 HDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHG--HLLIFGFG 481
Query: 663 ESQK-DAKYDQ-FFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPY 719
S K D DQ FF DYRPLIRD+ VLD++TQ PH + P L D P+ Y
Sbjct: 482 SSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHL--MPPPFLVDVDGNPHPSRY 539
Query: 720 QSMYQQR 726
Q + R
Sbjct: 540 QRLVPGR 546
Score = 209 (78.6 bits), Expect = 5.7e-68, Sum P(6) = 5.7e-68
Identities = 54/181 (29%), Positives = 88/181 (48%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDEV Y RQGH+ ++E ++ PW + + E K+V + Y
Sbjct: 893 FVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPWHKME--LREQELMKIVGIKYEV 950
Query: 1482 FPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
G CC + L F+DP + L G +F + ++ D DF+V + ++ A R W D
Sbjct: 951 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFEDAKYRRWNIGD 1007
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMH-DP 1599
+ +R+ + WW G I + E+P+S + Y V + GD+ SPW+M P
Sbjct: 1008 R----FRSVIDDA--WWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIP 1061
Query: 1600 N 1600
N
Sbjct: 1062 N 1062
Score = 97 (39.2 bits), Expect = 2.6e-44, Sum P(5) = 2.6e-44
Identities = 26/73 (35%), Positives = 38/73 (52%)
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S+ +A+ S D +IRV+ G P IS L HT V +I FS + + +S S D
Sbjct: 267 SAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSN---RFVSGSRD 323
Query: 352 GTCRIWDARYSQY 364
GT RIW + ++
Sbjct: 324 GTARIWQFKRREW 336
Score = 87 (35.7 bits), Expect = 7.5e-16, Sum P(4) = 7.5e-16
Identities = 22/71 (30%), Positives = 33/71 (46%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A ++ V +A N+ ++VW G I VL GH V + P P L S
Sbjct: 364 VTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVL--EPHPFDPRVLFS 421
Query: 348 SSDDGTCRIWD 358
+ DG +WD
Sbjct: 422 AGHDGNVIVWD 432
Score = 80 (33.2 bits), Expect = 3.8e-15, Sum P(4) = 3.8e-15
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GH+A + V+ N IA +
Sbjct: 123 VYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIA-AGS 181
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSP 640
D VW + P+ + + + +FSP
Sbjct: 182 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSP 214
Score = 75 (31.5 bits), Expect = 4.6e-42, Sum P(5) = 4.6e-42
Identities = 15/68 (22%), Positives = 31/68 (45%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAVSSNNTLVASASN 305
C+ F G F+ TGS D +++++ + ++ H + + S+ + S S
Sbjct: 263 CSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSR 322
Query: 306 DFVIRVWR 313
D R+W+
Sbjct: 323 DGTARIWQ 330
Score = 75 (31.5 bits), Expect = 1.2e-14, Sum P(4) = 1.2e-14
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q +Q I+ + + V +DR VIT ++ +K+W+ T + GHE ++
Sbjct: 350 QNLQGIED-KITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFV 408
Query: 291 LAVSSNNTLVA-SASNDFVIRVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
L + V SA +D + VW L G+ I +++ G GAV SP
Sbjct: 409 LEPHPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSP 461
Score = 64 (27.6 bits), Expect = 6.1e-41, Sum P(5) = 6.1e-41
Identities = 24/76 (31%), Positives = 32/76 (42%)
Query: 395 LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H +I A N T+ GS D RVW C + P L VL GH +
Sbjct: 158 LRGHAAEISDMAVNYENTMIAAGSCDKMIRVW--CLRTCA----P---LAVLQGHSASIT 208
Query: 453 YVQFSGCAVASRSAMS 468
+QFS S+ +S
Sbjct: 209 SLQFSPLCSGSKRYLS 224
Score = 55 (24.4 bits), Expect = 5.7e-68, Sum P(6) = 5.7e-68
Identities = 21/86 (24%), Positives = 39/86 (45%)
Query: 1147 DLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRV 1206
++ + R EE +H + K N P V + H+ D+G + + + ++
Sbjct: 684 EIKTYRSEEKRKHLTVPKE---NKMPTVS---KNHAHE-HFVDLGESKKQQANQH----- 731
Query: 1207 RIRTKGILRDTKSPSEQ-KSSTSVKD 1231
RT+ L +T PSE+ ++ TS D
Sbjct: 732 NYRTRSALEETPRPSEEIENGTSSSD 757
Score = 52 (23.4 bits), Expect = 5.7e-68, Sum P(6) = 5.7e-68
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYF-IKNAALSAKVERL 1704
DY + P+ +R L NY +E KD + ++ SN+++Y K + + + RL
Sbjct: 1290 DYRDIIDTPMDFATVRETLEAGNYESPMELCKD-VRLIFSNSKAYTPSKRSRIYSMSLRL 1348
Query: 1705 RDWFNRTLNKL 1715
+F ++ +
Sbjct: 1349 SAFFEEHISSV 1359
Score = 51 (23.0 bits), Expect = 1.2e-39, Sum P(5) = 1.2e-39
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C ++ G TGS D ++W+
Sbjct: 123 VYCVTFDRTGRRIFTGSDDCLVKIWA 148
Score = 47 (21.6 bits), Expect = 3.0e-23, Sum P(5) = 3.0e-23
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 666 KDAKYDQFFLGD-YRPLIRDS--LGNVLDQE 693
+DAKY ++ +GD +R +I D+ G + QE
Sbjct: 996 EDAKYRRWNIGDRFRSVIDDAWWFGTIESQE 1026
Score = 46 (21.3 bits), Expect = 2.5e-50, Sum P(5) = 2.5e-50
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 1170 STPLVDHQQNDDVHKSRNEDVGTNYRDE 1197
S PL D + ++K + + G+N RDE
Sbjct: 1073 SVPLTDVETRSLIYKPLDGEWGSNPRDE 1100
Score = 45 (20.9 bits), Expect = 5.7e-68, Sum P(6) = 5.7e-68
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 412 FVTGSSDTFARVW 424
FV+GS D AR+W
Sbjct: 317 FVSGSRDGTARIW 329
Score = 42 (19.8 bits), Expect = 1.1e-48, Sum P(5) = 1.1e-48
Identities = 21/83 (25%), Positives = 30/83 (36%)
Query: 1012 TTERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIVFADGSQDEKYDSQLEESAGDMENKTR 1071
TTE+ S + S A + G + N + + Q S G N T+
Sbjct: 1455 TTEQPSTSSAAKTFISKANTSAMPGKTVLENSVKHSKTLNTLSSPGQSNFSHGTRNNSTK 1514
Query: 1072 WAEVKIRTSKRSSSSGVL--LPP 1092
K + +KR S VL PP
Sbjct: 1515 ENMEKEKPAKRKMKSSVLSKTPP 1537
Score = 41 (19.5 bits), Expect = 3.4e-40, Sum P(5) = 3.4e-40
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
++ A++ + +T ++ +VW++ Q IH VL GHE++V
Sbjct: 363 KVTMVAWDRHDNTVITAVNNMTLKVWNSYTG------QLIH---VLMGHEDEV 406
Score = 40 (19.1 bits), Expect = 9.8e-67, Sum P(6) = 9.8e-67
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 1654 VPLYP---EVIRLRLVNNYYRSLEAAKDDINVMLSNAESY 1690
V YP I+ RL N +YR + + ++ + N ++
Sbjct: 1136 VVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTF 1175
Score = 40 (19.1 bits), Expect = 1.0e-49, Sum P(5) = 1.0e-49
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 773 IDPVYWEPENEVISDDNDSEYNIAEECASEAEQGRDSE 810
I P+Y + +V+SD + E A+ + + +D +
Sbjct: 1205 IIPLYNSMKKKVLSDSEEEEKEDADVPGTSTRKRKDHQ 1242
Score = 40 (19.1 bits), Expect = 4.3e-39, Sum P(5) = 4.3e-39
Identities = 11/38 (28%), Positives = 19/38 (50%)
Query: 641 DGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDY 678
+GTS S D G++ ++ G E ++ A + DY
Sbjct: 751 NGTS---SSDEGEVVAVSGGTSEEEERAWHSDGSSSDY 785
Score = 38 (18.4 bits), Expect = 8.0e-50, Sum P(5) = 8.0e-50
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 1465 YISAVETCKVVNLVYA 1480
Y S +E CK V L+++
Sbjct: 1313 YESPMELCKDVRLIFS 1328
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 308 (113.5 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 70/185 (37%), Positives = 99/185 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN+V G L+H+L+GH +VL+ HPF+ RI +SAG
Sbjct: 426 VTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAG 485
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG +WD+ GT IR Y I G + D KFSPDG +D G + L G
Sbjct: 486 HDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCS 545
Query: 663 ESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPYQS 721
+ + FF DYRPLIRD+ VLD++TQ PH + P L D P+ +Q
Sbjct: 546 KYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHL--MPPPFLVDVDGNPHPTKFQR 603
Query: 722 MYQQR 726
+ R
Sbjct: 604 LVPGR 608
Score = 308 (113.5 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 78/215 (36%), Positives = 115/215 (53%)
Query: 148 IAPNAADVPTLLGSGSFSLL----ECDRSMKYKQVKPLPAYLRWPHMQADQVHGLSLREI 203
I + V TLLG G SLL +C ++ R P + + V ++ I
Sbjct: 87 IPQSVPGVQTLLGVGRQSLLRDAKDCKNTLWNGSAFAALHRGRPPELPVNYVKPPNVVNI 146
Query: 204 GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSD 263
R + CS + PS+ Q ++ K++ GH +VYC FDRSGR + TGSD
Sbjct: 147 XSX-----RQXTGCSR-FXHXFPSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSD 200
Query: 264 DRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVL 323
D LVKIW+ + LA+ RGH +I+D+AV+ NTL+A+ S D V+RVW L P++VL
Sbjct: 201 DCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVL 260
Query: 324 RGHTGAVTAIAFSPRPSAIYQLLSSSD-DGTCRIW 357
+GH+ ++T+I F P + L+S+ DGT W
Sbjct: 261 QGHSASITSIQFCPSTKGTTRYLTSTGADGTICFW 295
Score = 227 (85.0 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 80/304 (26%), Positives = 141/304 (46%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDE+IY RQGH+ ++ + ++ PW ++ + E K+V + Y
Sbjct: 936 FVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWNKMD--LREQEFVKIVGIKYEI 993
Query: 1482 FPGSGDSCCKITLKFVDP-SSSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
P + CC + L F+DP S + G++F + ++ D DF+V Y+ A RNW D
Sbjct: 994 GPPT--LCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGD 1050
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHD-P 1599
+ +R+ + WW G + Q E+P+S + Y V + + SPW+M P
Sbjct: 1051 R----FRSIIDDA--WWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIP 1104
Query: 1600 NVMWEHPEIDSE---SRDKLLSSFNKLEQSV----SRKQDYYG-IQRLNEAAQKLDYLNR 1651
E+ + S+++L + K ++ SR ++ IQ +N LD+ +
Sbjct: 1105 EGTAFPDEVGAGIPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINNLLS-LDFASP 1163
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKN-AALSAKVERLRDWFNR 1710
F VP+ L Y ++ A D+N + E+ F + +AL +V R + R
Sbjct: 1164 FAVPVDLSAYPL------YCTVVAYPTDLNTIKQRLENRFYRRISALMWEV-RYIEHNAR 1216
Query: 1711 TLNK 1714
T N+
Sbjct: 1217 TFNE 1220
Score = 99 (39.9 bits), Expect = 1.7e-19, Sum P(4) = 1.7e-19
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 282 RGHEG-DITDLAVSSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPR 338
R G I+ + SS + + S D VIR++ L +P I+ L HT V A
Sbjct: 314 RSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAXQXCXN 373
Query: 339 PSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
++ + +S S DGT RIW + ++ I L D T L+
Sbjct: 374 GKSL-RFVSGSRDGTARIWQYQQQEWKS-IVL----DMATKMSGNNLTSTEDKVTKLK-- 425
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH--ELDVLSGHENDVNYVQF 456
+ A++ T +T ++ +VW++ + + H E+ VL H D +
Sbjct: 426 -VTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSG-HDDEVFVLEAHPFDQRIILS 483
Query: 457 SG 458
+G
Sbjct: 484 AG 485
Score = 93 (37.8 bits), Expect = 6.9e-19, Sum P(4) = 6.9e-19
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A +T V +A N+F+++VW G + L GH V + P I +LS
Sbjct: 426 VTMVAWDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRI--ILS 483
Query: 348 SSDDGTCRIWD 358
+ DG IWD
Sbjct: 484 AGHDGNIFIWD 494
Score = 92 (37.4 bits), Expect = 8.7e-19, Sum P(4) = 8.7e-19
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL-AVSSNNTLVASASNDFVI 309
+DR VIT ++ L+K+W+ T L + GH+ ++ L A + ++ SA +D I
Sbjct: 431 WDRYDTTVITAVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNI 490
Query: 310 RVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
+W L G I +++ G GAV FSP
Sbjct: 491 FIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSP 523
Score = 81 (33.6 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GHSA + V+ N IA AG
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 240
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPD--GTSIVLS 648
+ + VW + P+ + + + +F P GT+ L+
Sbjct: 241 SCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLT 284
Score = 75 (31.5 bits), Expect = 6.3e-44, Sum P(5) = 6.3e-44
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSM--ETAFCLASCRGHEGDITDLAVSSNNTLV--A 301
+ C+ F G F+ TGS D +++I+ + E +A H + N +
Sbjct: 321 ISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAXQXCXNGKSLRFV 380
Query: 302 SASNDFVIRVWR 313
S S D R+W+
Sbjct: 381 SGSRDGTARIWQ 392
Score = 67 (28.6 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGND 100
E+Y+LI FL SGPC ++ PRR W + S D
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-WEGKEHRRSFED 59
Score = 57 (25.1 bits), Expect = 4.4e-42, Sum P(5) = 4.4e-42
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 222 SAEISDMAVNYENTLIAAGSCDKVVRVW--CLRTCA----PVA---VLQGHSASITSIQF 272
Score = 56 (24.8 bits), Expect = 5.6e-42, Sum P(5) = 5.6e-42
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ +G TGS D ++W+
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWA 208
Score = 46 (21.3 bits), Expect = 6.0e-68, Sum P(5) = 6.0e-68
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 1209 RTKGILRDTKSPSEQKSSTSVKDLPSAESDPIP--MSESS 1246
+ G+ D+ S SE+ + D SAE DP+ SESS
Sbjct: 810 QNSGVQGDSDSSSEEDETVGTSDA-SAE-DPVVEWQSESS 847
Score = 45 (20.9 bits), Expect = 1.9e-49, Sum P(4) = 1.9e-49
Identities = 10/46 (21%), Positives = 25/46 (54%)
Query: 924 VQSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGN 969
+ + E+D ++ +++ K +E+ + S G+ L S+S +G+
Sbjct: 1573 LSASEEDESMGGEEKEMKETKEKAHLSSSESGELGSSLSSESTSGS 1618
Score = 45 (20.9 bits), Expect = 1.6e-48, Sum P(6) = 1.6e-48
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 1647 DYLNRFPVPLYPEVIRLRLVN-NYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ ++ L + NY LE KD + + SN+++Y K + + + RL
Sbjct: 1358 DYQDVVDTPMDFSTVKETLESGNYDSPLEFYKD-VRQIFSNSKAYTSNKKSRIYSMTLRL 1416
Query: 1705 RDWF-NRTLN 1713
F NR N
Sbjct: 1417 SALFENRIKN 1426
Score = 40 (19.1 bits), Expect = 1.6e-48, Sum P(6) = 1.6e-48
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 1568 SEEF--PNSPWDRYMVEYKTGDSHLHSPWEMHDPNVMWEHPEI 1608
SE F P P + + + G+S P + DP++ ++ ++
Sbjct: 1320 SEPFRQPADPHSHPVAQQQEGESSESVPPDRQDPSLSEDYQDV 1362
Score = 39 (18.8 bits), Expect = 3.2e-22, Sum P(3) = 3.2e-22
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 501 WIPRSRRSHGKVGRWTR 517
W R G+ GRW R
Sbjct: 1662 WKTRGTGGRGRWGRWGR 1678
Score = 38 (18.4 bits), Expect = 4.3e-21, Sum P(5) = 4.3e-21
Identities = 17/68 (25%), Positives = 26/68 (38%)
Query: 674 FLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEEPYQSMYQQRRLGALGI 733
F+GD S ++LD ++ N DP D+ M+ + RR G
Sbjct: 1239 FIGD------QSCTDILDTYNKIKAENPNSSDPEEDTEMVDLDSDGPGTSSGRRAKCRG- 1291
Query: 734 EWRPSSIK 741
R S+K
Sbjct: 1292 --RRQSLK 1297
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 307 (113.1 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 60/133 (45%), Positives = 87/133 (65%)
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
PS+ Q ++ K++ GH +VYC FDRSGR + TGSDD LVKIW+ + LA+ RGH
Sbjct: 163 PSSAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHS 222
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQL 345
+I+D+AV+ NTL+A+ S D V+RVW L P++VL+GH+ ++T+I F P +
Sbjct: 223 AEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTNRY 282
Query: 346 LSSSD-DGTCRIW 357
L+S+ DGT W
Sbjct: 283 LTSTGADGTICFW 295
Score = 307 (113.1 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 69/185 (37%), Positives = 99/185 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN++ G L+H+L+GH +VL+ HPF+ RI +SAG
Sbjct: 426 VTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAG 485
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG +WD+ GT IR Y I G + D KFSPDG +D G + L G
Sbjct: 486 HDGNIFIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCS 545
Query: 663 ESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPYQS 721
+ + FF DYRPLIRD+ VLD++TQ PH + P L D P+ +Q
Sbjct: 546 KYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHL--MPPPFLVDVDGNPHPTKFQR 603
Query: 722 MYQQR 726
+ R
Sbjct: 604 LVPGR 608
Score = 227 (85.0 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 80/304 (26%), Positives = 141/304 (46%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDE+IY RQGH+ ++ + ++ PW ++ + E K+V + Y
Sbjct: 938 FVPQMGDELIYFRQGHEAYVRAVRKSKIYSVNLQKQPWNKMD--LREQEFVKIVGIKYEV 995
Query: 1482 FPGSGDSCCKITLKFVDP-SSSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
P + CC + L F+DP S + G++F + ++ D DF+V Y+ A RNW D
Sbjct: 996 GPPT--LCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGD 1052
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHD-P 1599
+ +R+ + WW G + Q E+P+S + Y V + + SPW+M P
Sbjct: 1053 R----FRSIIDDA--WWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIP 1106
Query: 1600 NVMWEHPEIDSE---SRDKLLSSFNKLEQSV----SRKQDYYG-IQRLNEAAQKLDYLNR 1651
E+ + S+++L + K ++ SR ++ IQ +N LD+ +
Sbjct: 1107 EGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINHLLS-LDFASP 1165
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKN-AALSAKVERLRDWFNR 1710
F VP+ L Y ++ A D+N + E+ F + +AL +V R + R
Sbjct: 1166 FAVPVDLSAYPL------YCTVVAYPTDLNTIRRRLENRFYRRISALMWEV-RYIEHNAR 1218
Query: 1711 TLNK 1714
T N+
Sbjct: 1219 TFNE 1222
Score = 109 (43.4 bits), Expect = 4.7e-20, Sum P(5) = 4.7e-20
Identities = 54/236 (22%), Positives = 99/236 (41%)
Query: 239 LRGHRDAV----YCAIFDRSGRFVI-TGSDDRLVKI-WSMETA-F----CLASCRGHEG- 286
L+GH ++ +C + R++ TG+D + W ++T F + R G
Sbjct: 260 LQGHSASITSIQFCPSTKGTNRYLTSTGADGTICFWQWHVKTMKFRDRPVKFTERSRPGV 319
Query: 287 DITDLAVSSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQ 344
I+ + SS + + S D VIR++ L +P I+ L HT V A+ F ++ +
Sbjct: 320 QISCSSFSSGGMFITTGSTDHVIRIYYLGSEVPEKIAELESHTDKVVAVQFCNNGDSL-R 378
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCA 404
+S S DGT RIW +Y Q + + +TG + ++ A
Sbjct: 379 FVSGSRDGTARIW--QYQQQEWKSIVLDMATKMTGNNLPSGEDK------ITKLKVTMVA 430
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH--ELDVLSGHENDVNYVQFSG 458
++ T +T ++ +VW++ + + H E+ VL H D + +G
Sbjct: 431 WDRYDTTVITAVNNFLLKVWNSITGQLLHTLSG-HDDEVFVLEAHPFDQRIILSAG 485
Score = 92 (37.4 bits), Expect = 2.3e-18, Sum P(5) = 2.3e-18
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A +T V +A N+F+++VW G + L GH V + P I +LS
Sbjct: 426 VTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRI--ILS 483
Query: 348 SSDDGTCRIWD 358
+ DG IWD
Sbjct: 484 AGHDGNIFIWD 494
Score = 91 (37.1 bits), Expect = 2.9e-18, Sum P(5) = 2.9e-18
Identities = 29/93 (31%), Positives = 47/93 (50%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL-AVSSNNTLVASASNDFVI 309
+DR VIT ++ L+K+W+ T L + GH+ ++ L A + ++ SA +D I
Sbjct: 431 WDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNI 490
Query: 310 RVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
+W L G I +++ G GAV FSP
Sbjct: 491 FIWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSP 523
Score = 81 (33.6 bits), Expect = 2.9e-17, Sum P(5) = 2.9e-17
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GHSA + V+ N IA AG
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 240
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPD--GTSIVLS 648
+ + VW + P+ + + + +F P GT+ L+
Sbjct: 241 SCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTNRYLT 284
Score = 67 (28.6 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 51 EVYFLIIHFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGND 100
E+Y+LI FL SGPC ++ PRR W + S D
Sbjct: 11 ELYYLIARFLQSGPCNKSAQVLVQELEEHQLIPRRLD-WEGKEHRRSFED 59
Score = 57 (25.1 bits), Expect = 7.2e-42, Sum P(5) = 7.2e-42
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 222 SAEISDMAVNYENTLIAAGSCDKVVRVW--CLRTCA----PVA---VLQGHSASITSIQF 272
Score = 56 (24.8 bits), Expect = 9.1e-42, Sum P(5) = 9.1e-42
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ +G TGS D ++W+
Sbjct: 183 VYCVAFDRSGRRIFTGSDDCLVKIWA 208
Score = 48 (22.0 bits), Expect = 1.9e-40, Sum P(5) = 1.9e-40
Identities = 36/139 (25%), Positives = 54/139 (38%)
Query: 657 LNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYE 716
LN G Q++ + + GD I SL V ++ +RN +P C S+ +
Sbjct: 738 LNNGVSRVQEECRTAK---GD----IEISLYTVEKKKKPSYTTQRNDYEPSCGRSLRRTQ 790
Query: 717 EPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFSLGQDYAMPPLEDLERMMEPVPEFIDPV 776
Q YQ R IE + G+ +D ED E + DPV
Sbjct: 791 RKRQHTYQTRS----NIEHNSQASCQNSGVQ----EDSDSSSEED-ETVGTSDASVEDPV 841
Query: 777 Y-WEPENEVISDDNDSEYN 794
W+ E+ S D+ SEY+
Sbjct: 842 VEWQSESS--SSDSSSEYS 858
Score = 45 (20.9 bits), Expect = 1.3e-67, Sum P(5) = 1.3e-67
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 1195 RDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAESDPIP--MSESS 1246
R ++ N + + G+ D+ S SE+ + D S E DP+ SESS
Sbjct: 800 RSNIEHNS--QASCQNSGVQEDSDSSSEEDETVGTSDA-SVE-DPVVEWQSESS 849
Score = 45 (20.9 bits), Expect = 3.0e-49, Sum P(4) = 3.0e-49
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 924 VQSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGN 969
+ + E+D N+ ++ K +E++ + + G+ L S+S G+
Sbjct: 1576 LSASEEDENMGGEDKEKKETKEKSHLSTSESGELGSSLSSESTCGS 1621
Score = 44 (20.5 bits), Expect = 9.8e-49, Sum P(5) = 9.8e-49
Identities = 17/81 (20%), Positives = 37/81 (45%)
Query: 1637 QRLNEAAQKLDYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYFI-KN 1694
+R +++ DY + P+ ++ L NY LE KD + + +N+++Y K
Sbjct: 1351 ERQQDSSLSEDYQDVIDTPVDFSTVKETLEAGNYGSPLEFYKD-VRQIFNNSKAYTSNKK 1409
Query: 1695 AALSAKVERLRDWFNRTLNKL 1715
+ + + + RL F + +
Sbjct: 1410 SRIYSMMLRLSALFESHIKNI 1430
Score = 40 (19.1 bits), Expect = 4.2e-67, Sum P(5) = 4.2e-67
Identities = 5/20 (25%), Positives = 15/20 (75%)
Query: 926 SKEDDRNLQNMQQQHKREEE 945
S D+ NL++++++ K+ ++
Sbjct: 884 SSSDEENLKSLEERQKKPKQ 903
Score = 39 (18.8 bits), Expect = 5.3e-67, Sum P(5) = 5.3e-67
Identities = 29/121 (23%), Positives = 46/121 (38%)
Query: 1281 VRDGSKSSYKTRTDIEAFDGGMEDGI---NHEASGIDSPE-----AASGSI------RKT 1326
V++ S SS + + D +ED + E+S DS A I R+T
Sbjct: 816 VQEDSDSSSEEDETVGTSDASVEDPVVEWQSESSSSDSSSEYSDWTADAGINLQPPKRQT 875
Query: 1327 RSMKMKIISREPIAANCNFKSKNGHDLVGTSKTVGNSSM--EAHDEFFPEEWIPTSTVKS 1384
R KI S + + + K G S+ E ++E+F +WI T+
Sbjct: 876 RQTTRKICSSSDEENLKSLEERQKKPKQTRKKKGGLVSIAGEPNEEWFAPQWI-LDTIPR 934
Query: 1385 R 1385
R
Sbjct: 935 R 935
Score = 39 (18.8 bits), Expect = 1.0e-47, Sum P(5) = 1.0e-47
Identities = 25/108 (23%), Positives = 46/108 (42%)
Query: 1211 KGILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESSLCMEGNLMSEVPEEAEGYGRSSS- 1269
KG + K + +TSV ++ P+S+++ EG + + +E +G SSS
Sbjct: 1468 KGKQKQMKLQPKNDQNTSVSHARTSSPFSSPVSDAA---EGLSLYLLDDEPDGPFSSSSF 1524
Query: 1270 ---DQLLNSNLKFKVRDGSKSSYKTRTDIEAFDGGMEDGINHEA-SGI 1313
+ NS+ K + + D + DG + +G E +GI
Sbjct: 1525 GGYSRSGNSHDPGKAKSFRNRVLPVKQD-HSLDGPLTNGDGREPRTGI 1571
Score = 39 (18.8 bits), Expect = 7.0e-21, Sum P(4) = 7.0e-21
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 501 WIPRSRRSHGKVGRWTR 517
W R G+ GRW R
Sbjct: 1665 WKTRGTGGRGRWGRWGR 1681
Score = 37 (18.1 bits), Expect = 2.2e-21, Sum P(4) = 2.2e-21
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 356 IWDARYSQYSPRIYLPKPPDA 376
+W+ RY +++ R + PD+
Sbjct: 1207 MWEVRYIEHNARTF--NEPDS 1225
>UNIPROTKB|F1N8L6 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
OMA:MTGNNLP InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02013450
EMBL:AADN02013451 IPI:IPI00578454 Ensembl:ENSGALT00000011586
Uniprot:F1N8L6
Length = 1495
Score = 310 (114.2 bits), Expect = 1.6e-66, Sum P(4) = 1.6e-66
Identities = 60/133 (45%), Positives = 88/133 (66%)
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
P++ Q+M+ K++ GH +VYC FDRSGR + TGSDD LVKIW+ + L++ RGH
Sbjct: 100 PTSTYQQMKMHKRILGHLSSVYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHS 159
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP-RPSAIYQ 344
+I+D+AV+ NTL+A+ S D ++RVW L P++VL+GH+ ++T+I FSP R
Sbjct: 160 AEISDMAVNYENTLLAAGSCDKIVRVWCLRTCAPVAVLQGHSASITSIQFSPARKGTTRY 219
Query: 345 LLSSSDDGTCRIW 357
L S+ DGT W
Sbjct: 220 LTSTGADGTICFW 232
Score = 309 (113.8 bits), Expect = 1.6e-66, Sum P(4) = 1.6e-66
Identities = 83/248 (33%), Positives = 117/248 (47%)
Query: 461 VASRSAMSDAFKEENVPKFKNSWFCH--DNI--VTCSRDGSAIIWIPRSRRSHGKVGRWT 516
+ S S A E + K FC+ D++ V+ SRDG+A +W + H + W
Sbjct: 284 LGSESPEKMAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARVW-----QYHQQ--EWK 336
Query: 517 RAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVD 576
V V M+ W + V+ A+ + + VWN+
Sbjct: 337 -----SVVLDMATKMTGNNVASGEDKVTKLKVTMVAWDRYDATVITAVNNFLLKVWNSST 391
Query: 577 GSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIY--EI---GRF 631
G L+HSL+GH +VL+ HPF+ RI +SAG+DG +WDI +GT IR Y I G
Sbjct: 392 GQLLHSLSGHDDEVFVLEAHPFDQRIVLSAGHDGNIFIWDIDKGTKIRNYFNMIEGQGHG 451
Query: 632 KLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLD 691
+ D KFSPDG +D G + L G + + FF DYRPLIRD+ VLD
Sbjct: 452 AVFDCKFSPDGQHFACTDSHGHLLLFGFGCSKYYEKIPDQMFFHTDYRPLIRDANNYVLD 511
Query: 692 QETQLVPH 699
++TQ PH
Sbjct: 512 EQTQQAPH 519
Score = 218 (81.8 bits), Expect = 1.6e-66, Sum P(4) = 1.6e-66
Identities = 65/244 (26%), Positives = 113/244 (46%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDE+IY RQGH+ ++ + ++ PW + + E K V + Y
Sbjct: 881 FVPQMGDEIIYFRQGHEAYVRAVRKAKIYSINMQKQPWNKME--LREQEFVKTVGIKYEV 938
Query: 1482 FPGSGDSCCKITLKFVDP-SSSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
P + CC + L F+DP + + G++F + ++ D DF+V Y+ A RNW D
Sbjct: 939 GPPT--LCC-LKLAFLDPITGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGD 995
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHDPN 1600
+ +R+ + WW G + Q E+P+S + Y V + + SPW+M
Sbjct: 996 R----FRSIIDDA--WWFGTVESQQPFQAEYPDSSFQCYSVHWDNNEREKMSPWDMEPIP 1049
Query: 1601 VMWEHPE-IDSE---SRDKLLSSFNKLEQSV----SRKQDYYGIQRLNEAAQKLDYLNRF 1652
+PE + + + D+L + K ++ SR ++ + R E LD N F
Sbjct: 1050 EGTAYPEEVGAGVPVTPDELTALLYKPQEGEWGAHSRDEECERVIRGIEQLLSLDISNPF 1109
Query: 1653 PVPL 1656
VP+
Sbjct: 1110 AVPV 1113
Score = 107 (42.7 bits), Expect = 2.3e-18, Sum P(3) = 2.3e-18
Identities = 47/182 (25%), Positives = 75/182 (41%)
Query: 282 RGHEG-DITDLAVSSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPR 338
R G I+ + SS +A+ S D VIR++ L P ++ L HT V A+ F
Sbjct: 251 RSRPGVQISCSSFSSGGMFIATGSTDHVIRIYYLGSESPEKMAELESHTDKVVAVQFCNN 310
Query: 339 PSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
++ + +S S DGT R+W QY + + D T L+
Sbjct: 311 GDSL-RFVSGSRDGTARVW-----QYHQQEWKSVVLDMATKMTGNNVASGEDKVTKLKVT 364
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH--ELDVLSGHENDVNYVQF 456
+ Y+A TV +T ++ +VW++ + S H E+ VL H D V
Sbjct: 365 MVAWDRYDA--TV-ITAVNNFLLKVWNSSTGQLLHSLSG-HDDEVFVLEAHPFDQRIVLS 420
Query: 457 SG 458
+G
Sbjct: 421 AG 422
Score = 97 (39.2 bits), Expect = 2.4e-17, Sum P(3) = 2.4e-17
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL-AVSSNNTLVASASNDFVI 309
+DR VIT ++ L+K+W+ T L S GH+ ++ L A + +V SA +D I
Sbjct: 368 WDRYDATVITAVNNFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFDQRIVLSAGHDGNI 427
Query: 310 RVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
+W + G I +++ G GAV FSP
Sbjct: 428 FIWDIDKGTKIRNYFNMIEGQGHGAVFDCKFSP 460
Score = 86 (35.3 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A + V +A N+F+++VW G + L GH V + P I +LS
Sbjct: 363 VTMVAWDRYDATVITAVNNFLLKVWNSSTGQLLHSLSGHDDEVFVLEAHPFDQRI--VLS 420
Query: 348 SSDDGTCRIWD 358
+ DG IWD
Sbjct: 421 AGHDGNIFIWD 431
Score = 85 (35.0 bits), Expect = 4.1e-16, Sum P(3) = 4.1e-16
Identities = 26/100 (26%), Positives = 44/100 (44%)
Query: 220 CYAIAKPSTMVQKMQNIKKLRGHRDAVY--CAIFDRSGRFVITGSDDRLVKIWSM--ETA 275
C+ +TM K + +K R V C+ F G F+ TGS D +++I+ + E+
Sbjct: 230 CFWQWHANTMKFKDRPVKFAERSRPGVQISCSSFSSGGMFIATGSTDHVIRIYYLGSESP 289
Query: 276 FCLASCRGHEGDITDLAVSSNNTLV--ASASNDFVIRVWR 313
+A H + + +N + S S D RVW+
Sbjct: 290 EKMAELESHTDKVVAVQFCNNGDSLRFVSGSRDGTARVWQ 329
Score = 84 (34.6 bits), Expect = 5.2e-16, Sum P(3) = 5.2e-16
Identities = 27/103 (26%), Positives = 45/103 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I + R + DC + +W DG L+ +L GHSA + V+ N +A +
Sbjct: 120 VYCIAFDRSGRRIFTGSDDCLVKIWATDDGRLLSTLRGHSAEISDMAVNYENTLLA-AGS 178
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSP--DGTSIVLS 648
D VW + P+ + + + +FSP GT+ L+
Sbjct: 179 CDKIVRVWCLRTCAPVAVLQGHSASITSIQFSPARKGTTRYLT 221
Score = 62 (26.9 bits), Expect = 8.9e-41, Sum P(4) = 8.9e-41
Identities = 20/61 (32%), Positives = 26/61 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 159 SAEISDMAVNYENTLLAAGSCDKIVRVW--CLRTCA----PVA---VLQGHSASITSIQF 209
Query: 457 S 457
S
Sbjct: 210 S 210
Score = 56 (24.8 bits), Expect = 3.7e-40, Sum P(4) = 3.7e-40
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ +G TGS D ++W+
Sbjct: 120 VYCIAFDRSGRRIFTGSDDCLVKIWA 145
Score = 51 (23.0 bits), Expect = 1.6e-66, Sum P(4) = 1.6e-66
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 1640 NEAAQKLDYLNRFP----VPLYPE---VIRLRLVNNYYRSLEAAKDDINVMLSNAESY 1690
N A +D L+ +P V YP IR RL N +YR + A ++ + NA ++
Sbjct: 1107 NPFAVPVD-LSAYPMYCTVVAYPTDLTTIRRRLENRFYRRISALMWEVRYIEHNARTF 1163
Score = 43 (20.2 bits), Expect = 1.1e-65, Sum P(4) = 1.1e-65
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 1646 LDYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESY 1690
+DY + P+ ++ L NY LE KD I ++ N+++Y
Sbjct: 1303 VDYRDIVDTPMDFSTVKETLEAGNYTSPLEFYKD-IRLIFCNSKAY 1347
Score = 39 (18.8 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 25/138 (18%), Positives = 54/138 (39%)
Query: 659 TGQ--GESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYE 716
TG+ GES +D + D+ ++ ++ Q+ R+I D + +
Sbjct: 955 TGKMTGESFSIKYHDMPDVIDFL-VLHQFYNEAKERNWQIGDRFRSIIDDAWWFGTVESQ 1013
Query: 717 EPYQSMYQQRRLGALGIEWRPSSIKLAIGLDFS-LGQDYAMPPLEDLERMMEPVPEFIDP 775
+P+Q+ Y + W + + D + + A P E++ + P+ +
Sbjct: 1014 QPFQAEYPDSSFQCYSVHWDNNEREKMSPWDMEPIPEGTAYP--EEVGAGVPVTPDELTA 1071
Query: 776 VYWEP-ENEVISDDNDSE 792
+ ++P E E + D E
Sbjct: 1072 LLYKPQEGEWGAHSRDEE 1089
Score = 37 (18.1 bits), Expect = 4.5e-20, Sum P(3) = 4.5e-20
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 356 IWDARYSQYSPRIYLPKPPDA 376
+W+ RY +++ R + PD+
Sbjct: 1150 MWEVRYIEHNARTF--NEPDS 1168
>UNIPROTKB|F1N1C9 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00700000104382 OMA:MTGNNLP InterPro:IPR011044
SUPFAM:SSF50969 EMBL:DAAA02072255 IPI:IPI00686367
Ensembl:ENSBTAT00000021597 Uniprot:F1N1C9
Length = 1658
Score = 308 (113.5 bits), Expect = 4.6e-66, Sum P(4) = 4.6e-66
Identities = 70/185 (37%), Positives = 99/185 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V M+ W + V+ A+ + + VWN++ G L+H+L+GH +VL+ HPF+ RI +SAG
Sbjct: 283 VTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAG 342
Query: 608 YDGRTIVWDIWEGTPIRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+DG VWD+ GT IR Y I G + D KFSPDG +D G + L G
Sbjct: 343 HDGNIFVWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSPDGNHFACTDSHGHLLLFGFGCS 402
Query: 663 ESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDP-LCDSSMIPYEEPYQS 721
+ + FF DYRPLIRD+ VLD++TQ PH + P L D P+ +Q
Sbjct: 403 KYYEKIPDQMFFHTDYRPLIRDANNYVLDEQTQQAPHL--MPPPFLVDVDGNPHPTKFQR 460
Query: 722 MYQQR 726
+ R
Sbjct: 461 LVPGR 465
Score = 306 (112.8 bits), Expect = 4.6e-66, Sum P(4) = 4.6e-66
Identities = 60/133 (45%), Positives = 86/133 (64%)
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
PS Q ++ K++ GH +VYC FDRSGR + TGSDD LVKIW+ + LA+ RGH
Sbjct: 20 PSAAYQHIKMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHS 79
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQL 345
+I+D+AV+ NTL+A+ S D V+RVW L P++VL+GH+ ++T+I F P +
Sbjct: 80 AEISDMAVNYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRY 139
Query: 346 LSSSD-DGTCRIW 357
L+S+ DGT W
Sbjct: 140 LTSTGADGTICFW 152
Score = 223 (83.6 bits), Expect = 4.6e-66, Sum P(4) = 4.6e-66
Identities = 80/304 (26%), Positives = 140/304 (46%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDE+IY RQGH+ ++ + + PW ++ + E K+V + Y
Sbjct: 794 FVPQMGDELIYFRQGHEAYVRAVRKSKTYSVNLQKQPWNKMD--LREQEFVKIVGIKYEI 851
Query: 1482 FPGSGDSCCKITLKFVDP-SSSVLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
P + CC + L F+DP S + G++F + ++ D DF+V Y+ A RNW D
Sbjct: 852 GPPT--LCC-LKLAFLDPISGKMTGESFSIKYHDMPDVIDFLVLHQFYNEAKERNWQIGD 908
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHD-P 1599
+ +R+ + WW G + Q E+P+S + Y V + + SPW+M P
Sbjct: 909 R----FRSIIDDA--WWFGTVESQQPFQPEYPDSSFQCYSVHWDNNEREKMSPWDMEPIP 962
Query: 1600 NVMWEHPEIDSE---SRDKLLSSFNKLEQSV----SRKQDYYG-IQRLNEAAQKLDYLNR 1651
E+ + S+++L + K ++ SR ++ IQ +N LD+ +
Sbjct: 963 EGTAFPDEVGAGVPVSQEELTALLYKPQEGEWGAHSRDEECERVIQGINHLLS-LDFASP 1021
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKN-AALSAKVERLRDWFNR 1710
F VP+ L Y ++ A D+N + E+ F + +AL +V R + R
Sbjct: 1022 FAVPVDLSAYPL------YCTVVAYPTDLNTIRRRLENRFYRRISALMWEV-RYIEHNAR 1074
Query: 1711 TLNK 1714
T N+
Sbjct: 1075 TFNE 1078
Score = 108 (43.1 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 43/182 (23%), Positives = 75/182 (41%)
Query: 282 RGHEG-DITDLAVSSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPR 338
R G I+ + SS + + S D VIR++ L +P I+ L HT V A+ F
Sbjct: 171 RSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELESHTDKVVAVQFCNN 230
Query: 339 PSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
++ + +S S DGT RIW +Y Q + + +TG
Sbjct: 231 GDSL-RFVSGSRDGTARIW--QYQQQEWKSIVLDMATKMTGNNLPSGEDKVTKL------ 281
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH--ELDVLSGHENDVNYVQF 456
++ A++ T +T ++ +VW++ + + H E+ VL H D +
Sbjct: 282 KVTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSG-HDDEVFVLEAHPFDQRIILS 340
Query: 457 SG 458
+G
Sbjct: 341 AG 342
Score = 92 (37.4 bits), Expect = 5.4e-17, Sum P(3) = 5.4e-17
Identities = 30/93 (32%), Positives = 47/93 (50%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL-AVSSNNTLVASASNDFVI 309
+DR VIT ++ L+K+W+ T L + GH+ ++ L A + ++ SA +D I
Sbjct: 288 WDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRIILSAGHDGNI 347
Query: 310 RVWRLPDGLPI----SVLRGHT-GAVTAIAFSP 337
VW L G I +++ G GAV FSP
Sbjct: 348 FVWDLDRGTKIRNYFNMIEGQGHGAVFDCKFSP 380
Score = 91 (37.1 bits), Expect = 6.9e-17, Sum P(3) = 6.9e-17
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+T +A +T V +A N+F+++VW G + L GH V + P I +LS
Sbjct: 283 VTMVAWDRYDTTVITAVNNFLLKVWNSITGQLLHTLSGHDDEVFVLEAHPFDQRI--ILS 340
Query: 348 SSDDGTCRIWD 358
+ DG +WD
Sbjct: 341 AGHDGNIFVWD 351
Score = 81 (33.6 bits), Expect = 7.2e-16, Sum P(3) = 7.2e-16
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + + R + DC + +W DG L+ +L GHSA + V+ N IA AG
Sbjct: 40 VYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIA--AG 97
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPD--GTSIVLS 648
+ + VW + P+ + + + +F P GT+ L+
Sbjct: 98 SCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLT 141
Score = 80 (33.2 bits), Expect = 1.3e-42, Sum P(4) = 1.3e-42
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 228 TMVQKMQNIKKLRGHRDAVY--CAIFDRSGRFVITGSDDRLVKIWSM--ETAFCLASCRG 283
TM K + +K R V C+ F G F+ TGS D +++I+ + E +A
Sbjct: 158 TMKFKDRPVKFTERSRPGVQISCSSFSSGGMFITTGSTDHVIRIYYLGSEIPEKIAELES 217
Query: 284 HEGDITDLAVSSNNTLV--ASASNDFVIRVWR 313
H + + +N + S S D R+W+
Sbjct: 218 HTDKVVAVQFCNNGDSLRFVSGSRDGTARIWQ 249
Score = 57 (25.1 bits), Expect = 3.2e-40, Sum P(4) = 3.2e-40
Identities = 19/60 (31%), Positives = 25/60 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S +I A N T+ GS D RVW C + P+ VL GH + +QF
Sbjct: 79 SAEISDMAVNYENTLIAAGSCDKVVRVW--CLRTCA----PVA---VLQGHSASITSIQF 129
Score = 56 (24.8 bits), Expect = 4.0e-40, Sum P(4) = 4.0e-40
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWS 425
+ C A++ +G TGS D ++W+
Sbjct: 40 VYCVAFDRSGRRIFTGSDDCLVKIWA 65
Score = 49 (22.3 bits), Expect = 4.6e-66, Sum P(4) = 4.6e-66
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 1163 KKSSSFNSTPLVDHQQN--DDVHKSRNEDVGT-NYRDELKENPPLRVRIRTKGILRDTKS 1219
KK S+ +T D+Q + + +++ + T R ++ N R + G+ D+ S
Sbjct: 622 KKKPSY-TTQRSDYQPSYGRSLRRTQRKRQHTYQTRSNIEHNS--RASCQNSGVQEDSDS 678
Query: 1220 PSEQKSSTSVKDLPSAESDPIP--MSESS 1246
SE+ + D S E DP+ SESS
Sbjct: 679 SSEEDETVGTSDA-SIE-DPVIEWQSESS 705
Score = 44 (20.5 bits), Expect = 1.5e-65, Sum P(4) = 1.5e-65
Identities = 30/121 (24%), Positives = 46/121 (38%)
Query: 1281 VRDGSKSSYKTRTDIEAFDGGMEDGI---NHEASGIDSPE-----AASGSI------RKT 1326
V++ S SS + + D +ED + E+S DS A I R+T
Sbjct: 672 VQEDSDSSSEEDETVGTSDASIEDPVIEWQSESSSSDSSSEYSDWTADAGINLQPPKRQT 731
Query: 1327 RSMKMKIISREPIAANCNFKSKNGHDLVGTSKTVGNSSM--EAHDEFFPEEWIPTSTVKS 1384
R KI S + + + K G SM E ++E+F +WI T+
Sbjct: 732 RQATQKICSSSEEENLKSLEERQKKPKQTRKKKGGLVSMAGEPNEEWFAPQWI-LDTIPR 790
Query: 1385 R 1385
R
Sbjct: 791 R 791
Score = 43 (20.2 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY + P+ ++ L NY LE KD + + SN+++Y K + + + RL
Sbjct: 1217 DYHDVIDTPMDFSTVKETLETGNYGSPLEFYKD-VRQIFSNSKAYTSNKKSRIYSMTLRL 1275
Query: 1705 RDWFNRTLNKL 1715
F + +
Sbjct: 1276 SALFESRIKNI 1286
Score = 42 (19.8 bits), Expect = 5.1e-46, Sum P(4) = 5.1e-46
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 924 VQSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGN 969
+ + E+D + +++ K +E++ + S G+ L S+S G+
Sbjct: 1432 LSASEEDEIMGREEKEKKETKEKSHLSSSESGELESSLSSESTCGS 1477
Score = 39 (18.8 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 7/17 (41%), Positives = 8/17 (47%)
Query: 501 WIPRSRRSHGKVGRWTR 517
W R G+ GRW R
Sbjct: 1521 WKTRGTGGRGRWGRWGR 1537
Score = 37 (18.1 bits), Expect = 4.0e-46, Sum P(4) = 4.0e-46
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 835 TSSGRRVRKR 844
TSSGRRV+ R
Sbjct: 1139 TSSGRRVKCR 1148
Score = 37 (18.1 bits), Expect = 4.7e-19, Sum P(3) = 4.7e-19
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 356 IWDARYSQYSPRIYLPKPPDA 376
+W+ RY +++ R + PD+
Sbjct: 1063 MWEVRYIEHNARTF--NEPDS 1081
>ZFIN|ZDB-GENE-041111-120 [details] [associations]
symbol:brwd1 "bromodomain and WD repeat domain
containing 1" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 ZFIN:ZDB-GENE-041111-120 Gene3D:2.130.10.10
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR011047
SUPFAM:SSF50998 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 EMBL:BX088654
EMBL:CT573306 IPI:IPI00898300 Ensembl:ENSDART00000115034
Uniprot:E7F145
Length = 2008
Score = 326 (119.8 bits), Expect = 6.4e-65, Sum P(5) = 6.4e-65
Identities = 84/262 (32%), Positives = 124/262 (47%)
Query: 445 SGHENDVNYVQFSGCAVASRSAMSDAFKEENVPKFKNSWFCH--DNIVTCSRDGSAIIWI 502
+G +DV + + G + A D+ + K + FCH + V+ SRDG+A IW
Sbjct: 166 TGSTDDVIRIYYLGSGSPEKLAELDSHTD----KVDSIQFCHSGERFVSGSRDGTARIW- 220
Query: 503 PRSRRSHGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLA 562
R + H +W V V M+ W + V+
Sbjct: 221 -RLHQRH----QWK-----SVLLDMSATLPGSAPLTDDENFFKPKVTMVSWDRHDNTVIT 270
Query: 563 AIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTP 622
A+ + + VWN+ G L+H L GH A +VL+ HP++PRI +SAG+DG VWD+ +GT
Sbjct: 271 AVNNHLLKVWNSYTGQLLHVLKGHEAEVFVLEPHPYDPRIMLSAGHDGNVFVWDLIKGTK 330
Query: 623 IRIY--EI---GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGD 677
Y I G + D KF+PDG ++D G + + G + + FF D
Sbjct: 331 TMHYFNMIEGQGHGAVFDCKFTPDGHRFAMTDSHGHLVIFGFGSSKPYEKLPDQVFFHTD 390
Query: 678 YRPLIRDSLGNVLDQETQLVPH 699
YRPLIRD+ G VLD++TQ PH
Sbjct: 391 YRPLIRDTNGFVLDEQTQQAPH 412
Score = 286 (105.7 bits), Expect = 6.4e-65, Sum P(5) = 6.4e-65
Identities = 59/138 (42%), Positives = 87/138 (63%)
Query: 233 MQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
M+ +++ GH AVYC FDR+G + TGSDD LVKIWS ++ RGH +I+DLA
Sbjct: 1 MKMHRRILGHLSAVYCIAFDRTGSRIFTGSDDALVKIWSSFDGRLHSTLRGHYAEISDLA 60
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP--RPSAIYQLLSSSD 350
V+ NTL+A+ S D IRVW L P++VL+GH+G++T++ FSP + S Y + + +D
Sbjct: 61 VNFENTLIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFVKGSKRYMVSTGTD 120
Query: 351 DGTCRI-WDARYSQYSPR 367
C WD +++S R
Sbjct: 121 ATVCFWQWDVNNNEFSDR 138
Score = 217 (81.4 bits), Expect = 6.4e-65, Sum P(5) = 6.4e-65
Identities = 79/369 (21%), Positives = 151/369 (40%)
Query: 1250 EGNLMSEVPEEAEGYGRSSSDQLLNSNLKFKVRDGSKSSYKTRTDIEAFDGGMEDGINHE 1309
EG + + + L ++F +G +++ +++E G + +
Sbjct: 615 EGPCLKRTQSRKRQKNQERKENLAEEYIEFSCEEGEETASSEASEVE--------GSDID 666
Query: 1310 ASGIDSPEAASGSIRKTRSMKMKIISREPIAANCNFKSKNGHDL-VGTSKTVGNSSMEAH 1368
+S D E S S ++ S + I+ + S+ + +S+ E
Sbjct: 667 SSAEDEEEWKSDSSSRSSSDYSDWTADAGISVRTSDSSRRRTTRRISSSEEEDEEDDEEE 726
Query: 1369 DEFFPEEWIPTSTVKSRPRSTRNRRGDHDGH--PCLLSGRKSNFPVRKLSWLMLSEHEEG 1426
+E EE S PR + + H P R+ + R +W+ +
Sbjct: 727 EEPADEEPAVGEEETSSPRKHKKAKSKTPKHSKPRPSINREISNEFRPPAWITDVVPRKS 786
Query: 1427 YRYIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVY 1479
++PQ+GDEVIY RQGH+ ++++ + PW + + E K+ + Y
Sbjct: 787 -PFVPQMGDEVIYFRQGHEAYVDAVCRMNLYPINLDKQPWKKMQ--LRDQEFVKITGIKY 843
Query: 1480 ATFPGSGDSCCKITLKFVDPSSS-VLGKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTH 1538
P + CC + L +DP + + + F + ++ D DF+V + YD A +R WT
Sbjct: 844 EVCPPT--LCC-LKLTQIDPGTGKITDRTFSIKYHDMADVIDFLVLRQSYDEARNRVWTS 900
Query: 1539 RDKCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMHD 1598
D+ +R+ + WW G I + E+P+S + + V++ G++ SPW++
Sbjct: 901 NDR----FRSVIDDA--WWFGAIVCHEPYQSEYPDSHFQCFKVKWDNGETEKLSPWDVEA 954
Query: 1599 PNVMWEHPE 1607
E PE
Sbjct: 955 IPENAEQPE 963
Score = 89 (36.4 bits), Expect = 2.8e-15, Sum P(5) = 2.8e-15
Identities = 38/133 (28%), Positives = 57/133 (42%)
Query: 239 LRGHRDAVYCAIFDR----SGRFVITGSDDRLVKIWSMETAFCLASCRGHE-------GD 287
L+GH ++ F S R++++ D V W + S R H+ G
Sbjct: 91 LQGHSGSITSLQFSPFVKGSKRYMVSTGTDATVCFWQWDVNNNEFSDRQHKFTERPRPGV 150
Query: 288 ITDLA-VSSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPSAIYQ 344
T + S +A+ S D VIR++ L G P ++ L HT V +I F +
Sbjct: 151 QTVCSSFSPGGMFLATGSTDDVIRIYYLGSGSPEKLAELDSHTDKVDSIQFCHSGE---R 207
Query: 345 LLSSSDDGTCRIW 357
+S S DGT RIW
Sbjct: 208 FVSGSRDGTARIW 220
Score = 87 (35.7 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 20/63 (31%), Positives = 34/63 (53%)
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+NT++ +A N+ +++VW G + VL+GH V + P P +LS+ DG
Sbjct: 265 DNTVI-TAVNNHLLKVWNSYTGQLLHVLKGHEAEVFVL--EPHPYDPRIMLSAGHDGNVF 321
Query: 356 IWD 358
+WD
Sbjct: 322 VWD 324
Score = 86 (35.3 bits), Expect = 1.3e-15, Sum P(4) = 1.3e-15
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT-LVASASNDFVI 309
+DR VIT ++ L+K+W+ T L +GHE ++ L + ++ SA +D +
Sbjct: 261 WDRHDNTVITAVNNHLLKVWNSYTGQLLHVLKGHEAEVFVLEPHPYDPRIMLSAGHDGNV 320
Query: 310 RVWRLPDGLP----ISVLRGHT-GAVTAIAFSP 337
VW L G +++ G GAV F+P
Sbjct: 321 FVWDLIKGTKTMHYFNMIEGQGHGAVFDCKFTP 353
Score = 85 (35.0 bits), Expect = 4.6e-17, Sum P(5) = 4.6e-17
Identities = 39/131 (29%), Positives = 54/131 (41%)
Query: 554 SLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF---NPRIAMSAGYDG 610
+ +N + A D I VW + V L GHS S L PF + R +S G D
Sbjct: 62 NFENTLIAAGSCDKTIRVWCLRTCAPVAVLQGHSGSITSLQFSPFVKGSKRYMVSTGTDA 121
Query: 611 RTIVW--DI----WEGTPIRIYEIGR--FKLVDGKFSPDGTSIVL--SDDVGQIYLLNTG 660
W D+ + + E R + V FSP G + +DDV +IY L G
Sbjct: 122 TVCFWQWDVNNNEFSDRQHKFTERPRPGVQTVCSSFSPGGMFLATGSTDDVIRIYYL--G 179
Query: 661 QGESQKDAKYD 671
G +K A+ D
Sbjct: 180 SGSPEKLAELD 190
Score = 81 (33.6 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 19/69 (27%), Positives = 31/69 (44%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAVSSNNTLVASASN 305
C+ F G F+ TGS D +++I+ + + LA H + + + S S
Sbjct: 154 CSSFSPGGMFLATGSTDDVIRIYYLGSGSPEKLAELDSHTDKVDSIQFCHSGERFVSGSR 213
Query: 306 DFVIRVWRL 314
D R+WRL
Sbjct: 214 DGTARIWRL 222
Score = 75 (31.5 bits), Expect = 1.6e-14, Sum P(4) = 1.6e-14
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
D + +W++ DG L +L GH A L V+ N IA AG +TI VW + P+
Sbjct: 32 DALVKIWSSFDGRLHSTLRGHYAEISDLAVNFENTLIA--AGSCDKTIRVWCLRTCAPVA 89
Query: 625 IYEIGRFKLVDGKFSP 640
+ + + +FSP
Sbjct: 90 VLQGHSGSITSLQFSP 105
Score = 64 (27.6 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 87/416 (20%), Positives = 167/416 (40%)
Query: 941 KREEEQTIVESEFMGKPLEL--LESQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGD-- 996
KR+ E++ SE G P+E LES +D R++ + + K + +T + +
Sbjct: 1549 KRQWEESDDNSEDGGSPIESENLESDNDLVVRRKSTRRTAKAAVSKIKKINNTDAEEEEN 1608
Query: 997 ---DMAKLPQSSSGPPQGTTERKIDLS--LKEPGSSSAGSGIDVGLSQKHNRIVFADGSQ 1051
D + +S + + +++ +++ + LK P + G +D K + A +
Sbjct: 1609 CTRDRRQKHRSITQESENSSDEEVETTKTLKHPHQN--GRKVDA----KELKRCKAPSER 1662
Query: 1052 DEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSS----SGVLLPPDANFDVHNDSI-GDV 1106
E+ + +++ + T + S+ S S A+ D N S D
Sbjct: 1663 QEQSPAAKQKTTHKKSSATDACMSTTQDSEELSDDVEKSVTHRKRIASEDEENQSDDADQ 1722
Query: 1107 NRCVKLENGHGKFSSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSS 1166
R K N SSN+ C + SD+ SD D ++ E + E K +
Sbjct: 1723 RRVPKNRNR----SSNARKQKL-C--ASSDESSSESDEKADRGRIKSEGTSSDEWQKSDT 1775
Query: 1167 SFNSTPLVDHQQNDDVHKSRNEDVGT----NY--RDELKENPPLRVRIRTKGILRDTKSP 1220
S ++ S+ + T NY D +E P ++ ++ K +++ ++
Sbjct: 1776 SEEDKKTHPQRKPCPTVASKGVSLRTRPKKNYIMEDSEEEFSP-KMDVQAKNGVKNQQAN 1834
Query: 1221 SEQK--SSTSVKDLPSAESDPIPMSESSLCMEGNLMSEVPEE-AEGYGR--SSSDQLLNS 1275
S + S K S+ S+SS +GN ++E + A+ + + S+D +
Sbjct: 1835 SRTRKPSGGGFKRKHGGSSESDADSKSSRSSDGNKLAEAQRKSAKRFKQLMGSTDSESDF 1894
Query: 1276 NLKFKVRDG--SKS-------SYKTRTDIEAFDGGMEDGINHEASGIDSPEAASGS 1322
+ K +G +S S + R E+ G ++G N E+ +S EA+SGS
Sbjct: 1895 ETRCKSENGRAQRSQGKLPTVSRQRRKQSESDKGSNDNGSNFESEESES-EASSGS 1949
Score = 63 (27.2 bits), Expect = 3.0e-48, Sum P(4) = 3.0e-48
Identities = 93/461 (20%), Positives = 162/461 (35%)
Query: 833 LKTSSGRRVRKRNLDERDGSAS-GSNR----TXXXXXXXXXXXXXXXXXXXXRPQRVAAR 887
LK +R RK++ + S S GS R T P+R A
Sbjct: 1258 LKLRRSQRCRKKSQHQESVSFSQGSTRQKRATIKTQENTEQSTAKSTSAKVSGPERRRAH 1317
Query: 888 NARSMFSRITGTSTGXXXXXXXXXXXXXXTVLQDSHVQSKEDDRNLQNMQQQHKREEEQT 947
A+ F R + +S+G + S QS EDD + + + +RE T
Sbjct: 1318 EAKETFRRSSSSSSGSDQDS------------KQSLSQSDEDDEHSSSSRAM-RRETRAT 1364
Query: 948 IVES-EFMGKPLELLESQSDTGNRKRLVLKLSLR-----DHKKALSLEDT--RVKGDDMA 999
++ + G ES R R + R DH+ + ++ ++
Sbjct: 1365 RKKAAQNKGAKSRRPESHVKMNGRSRSHERQKPRTSSDSDHEPSQGSDEASENESSPSVS 1424
Query: 1000 KLPQSSSGPPQGTTERK-IDLSLKEPGSSSAGSGIDVGLSQKHNRIVFADGSQDEKYDSQ 1058
+ P++ + K ID E G+ G G G ++ R DS
Sbjct: 1425 RRPRTRKTAMAAVNKMKLIDTLGDEEGTDDEGGG---GSTRPATRASKRSAVIQSSSDSD 1481
Query: 1059 LEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIGDVNRCVK------- 1111
EE A + ++ E S+ S+G ++ N C +
Sbjct: 1482 DEEEAAASQEESN--ESGSSASEGEKSAGSADSDSSSHSKKNSRTAGRRPCRRPAEKKET 1539
Query: 1112 --LENGHG---KFSSNSETSCYGCVRSCSDKEKFGSDALLDLASVRKEELARHEDIKKSS 1166
L NGHG ++ + + S G S+ + +D ++ S R+ A IKK
Sbjct: 1540 SPLTNGHGTKRQWEESDDNSEDGGSPIESENLESDNDLVVRRKSTRRTAKAAVSKIKK-- 1597
Query: 1167 SFNSTPLVDHQQ--ND--DVHKSRNEDVGTNYRDELKENPPLRV------RIRTKGILRD 1216
N+T + + D H+S ++ + +E++ L+ ++ K + R
Sbjct: 1598 -INNTDAEEEENCTRDRRQKHRSITQESENSSDEEVETTKTLKHPHQNGRKVDAKELKR- 1655
Query: 1217 TKSPSE-QKSSTSVKDLPSAESDPIPMSESSLCMEGNLMSE 1256
K+PSE Q+ S + K + + S + CM SE
Sbjct: 1656 CKAPSERQEQSPAAKQKTTHKKS----SATDACMSTTQDSE 1692
Score = 62 (26.9 bits), Expect = 6.4e-65, Sum P(5) = 6.4e-65
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 1647 DYLNRFPVPLYPEVIRLRLVNNYYRS-LEAAKDDINVMLSNAESYFI-KNAALSAKVERL 1704
DY N P+ +R L + Y + ++ KD I ++ +NA++Y K + + + RL
Sbjct: 1177 DYTNIIDTPMDLGTVRQTLEEDRYENPIDVCKD-IRLIFANAKAYTPNKRSKIYSMTLRL 1235
Query: 1705 RDWFNRTLNKL 1715
+F + K+
Sbjct: 1236 SAFFEENIRKI 1246
Score = 62 (26.9 bits), Expect = 7.3e-42, Sum P(5) = 7.3e-42
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA 426
+ C A++ G+ TGS D ++WS+
Sbjct: 14 VYCIAFDRTGSRIFTGSDDALVKIWSS 40
Score = 61 (26.5 bits), Expect = 9.2e-42, Sum P(5) = 9.2e-42
Identities = 23/75 (30%), Positives = 31/75 (41%)
Query: 395 LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H +I A N T+ GS D RVW C + P+ VL GH +
Sbjct: 49 LRGHYAEISDLAVNFENTLIAAGSCDKTIRVW--CLRTCA----PVA---VLQGHSGSIT 99
Query: 453 YVQFSGCAVASRSAM 467
+QFS S+ M
Sbjct: 100 SLQFSPFVKGSKRYM 114
Score = 60 (26.2 bits), Expect = 1.0e-64, Sum P(5) = 1.0e-64
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 1652 FPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNA--ALSAKV 1701
+P L I+LRL +N+YR L A D+ + NA+++ + A SAK+
Sbjct: 1034 YPTDL--NTIKLRLKHNFYRRLSALIWDVKHIEQNAKTFNEPRSKIAQSAKI 1083
Score = 56 (24.8 bits), Expect = 1.1e-16, Sum P(5) = 1.1e-16
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM 272
+ + +L H D V F SG ++GS D +IW +
Sbjct: 184 EKLAELDSHTDKVDSIQFCHSGERFVSGSRDGTARIWRL 222
Score = 54 (24.1 bits), Expect = 1.8e-46, Sum P(5) = 1.8e-46
Identities = 19/75 (25%), Positives = 34/75 (45%)
Query: 925 QSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKK 984
+++ L + +Q +++ E ++ G E ES+S+ + R K LRD +
Sbjct: 1904 RAQRSQGKLPTVSRQRRKQSESDKGSND-NGSNFESEESESEASSGSRSSPKRRLRDRDR 1962
Query: 985 --ALSLEDTRVKGDD 997
A S + RV DD
Sbjct: 1963 GTARSRKPRRVVSDD 1977
Score = 53 (23.7 bits), Expect = 3.3e-47, Sum P(4) = 3.3e-47
Identities = 63/315 (20%), Positives = 117/315 (37%)
Query: 922 SHVQSKEDDRNLQNMQQQHKREE--EQTIVESEFMGKPLELLESQSDTGNRKRLVLKLS- 978
+H +S D + Q + + E+++ + + E E+QSD +++R+ +
Sbjct: 1674 THKKSSATDACMSTTQDSEELSDDVEKSVTHRKRIASEDE--ENQSDDADQRRVPKNRNR 1731
Query: 979 ---LRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGTTERKIDLS--------LKEPGSS 1027
R K S +++ + D+ A + S +K D S ++P +
Sbjct: 1732 SSNARKQKLCASSDESSSESDEKADRGRIKSEGTSSDEWQKSDTSEEDKKTHPQRKPCPT 1791
Query: 1028 SAGSGIDVGLSQKHNRIVFADGSQDE---KYDSQLEESAGDMENKTRWAEVKIRTSKRSS 1084
A G+ + K N I+ + S++E K D Q + + + +R + KR
Sbjct: 1792 VASKGVSLRTRPKKNYIM--EDSEEEFSPKMDVQAKNGVKNQQANSRTRKPSGGGFKRKH 1849
Query: 1085 SSGVLLPPDANFDVHNDSIGDVNRCVKLENGHGKFSSNSETSCYGCVRSCSDKE-KFGSD 1143
+++ D + D N KL K S+ G S SD E + S+
Sbjct: 1850 GGS----SESDADSKSSRSSDGN---KLAEAQRK-SAKRFKQLMGSTDSESDFETRCKSE 1901
Query: 1144 ALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPP 1203
S K + K+S S D ND+ +E+ + + +P
Sbjct: 1902 NGRAQRSQGKLPTVSRQRRKQSES-------DKGSNDNGSNFESEESESEASSGSRSSPK 1954
Query: 1204 LRVRIRTKGILRDTK 1218
R+R R +G R K
Sbjct: 1955 RRLRDRDRGTARSRK 1969
Score = 48 (22.0 bits), Expect = 3.3e-36, Sum P(5) = 3.3e-36
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 408 NGTVFVTGSSDTFARVW 424
+G FV+GS D AR+W
Sbjct: 204 SGERFVSGSRDGTARIW 220
Score = 47 (21.6 bits), Expect = 2.2e-47, Sum P(5) = 2.2e-47
Identities = 27/114 (23%), Positives = 46/114 (40%)
Query: 970 RKRLVLKLSLRDHKKALSLEDTRVKGDDMAKLPQSSSGPPQGTTERKIDLSLKEPGSSSA 1029
+KR V + RD E +K K Q + + E I+ S +E +++
Sbjct: 599 KKRRVTHSTFRDDSDE---EGPCLKRTQSRKR-QKNQERKENLAEEYIEFSCEEGEETAS 654
Query: 1030 GSGIDVGLSQKHNRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRS 1083
+V S + A+ ++ K DS S+ D + T A + +RTS S
Sbjct: 655 SEASEVEGSDIDSS---AEDEEEWKSDSS-SRSSSDYSDWTADAGISVRTSDSS 704
Score = 46 (21.3 bits), Expect = 3.0e-18, Sum P(4) = 3.0e-18
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 416 SSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDAFK 472
+ +TF R S+ S +DS+Q + + D H + ++ A ++A + K
Sbjct: 1319 AKETFRRSSSSSSGSDQDSKQSLSQSDEDDEHSSSSRAMRRETRATRKKAAQNKGAK 1375
Score = 43 (20.2 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 701 RNIQDPLCDSSMIPYEEPYQSMYQQRRLGALGIEW 735
R++ D I EPYQS Y ++W
Sbjct: 905 RSVIDDAWWFGAIVCHEPYQSEYPDSHFQCFKVKW 939
Score = 43 (20.2 bits), Expect = 3.6e-46, Sum P(4) = 3.6e-46
Identities = 21/81 (25%), Positives = 33/81 (40%)
Query: 779 EPENEVISDDNDSEYNIAEECASEAEQG---------RDSEVEXXXXXXXXXXXXXXXXA 829
+ E++ S+DN S + +EE SEA G RD + +
Sbjct: 1922 QSESDKGSNDNGSNFE-SEESESEASSGSRSSPKRRLRDRD-RGTARSRKPRRVVSDDDS 1979
Query: 830 EVEL-KTSSGRRVRKRNLDER 849
+V K GRR++ RN +R
Sbjct: 1980 DVSFEKPRRGRRIQTRNKGKR 2000
Score = 41 (19.5 bits), Expect = 1.8e-46, Sum P(5) = 1.8e-46
Identities = 8/32 (25%), Positives = 17/32 (53%)
Query: 781 ENEVISDDNDSEYNIAEECASEAEQGRDSEVE 812
++E +SDD + + ASE E+ + + +
Sbjct: 1690 DSEELSDDVEKSVTHRKRIASEDEENQSDDAD 1721
Score = 40 (19.1 bits), Expect = 2.4e-18, Sum P(4) = 2.4e-18
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 426 ACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDAFKEENVPKFKN 481
AC S+ +DSE+ +++ H + A SD + VPK +N
Sbjct: 1683 ACMSTTQDSEELSDDVEKSVTHRKRI--------ASEDEENQSDDADQRRVPKNRN 1730
Score = 40 (19.1 bits), Expect = 2.8e-15, Sum P(5) = 2.8e-15
Identities = 21/108 (19%), Positives = 42/108 (38%)
Query: 344 QLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCC 403
+ +S S DGT RIW + ++ + L + G ++
Sbjct: 207 RFVSGSRDGTARIWRL-HQRHQWKSVLLDMSATLPGSAPLTDDENFF------KPKVTMV 259
Query: 404 AYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
+++ + +T ++ +VW++ Q +H VL GHE +V
Sbjct: 260 SWDRHDNTVITAVNNHLLKVWNSYTG------QLLH---VLKGHEAEV 298
Score = 38 (18.4 bits), Expect = 6.4e-65, Sum P(5) = 6.4e-65
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 680 PLIRDSLGNVLDQETQ-LVPHRRNIQD 705
P + D GN Q LVP R NI D
Sbjct: 417 PFLVDVDGNPHPPRFQRLVPGRENIAD 443
Score = 37 (18.1 bits), Expect = 2.3e-46, Sum P(5) = 2.3e-46
Identities = 9/44 (20%), Positives = 22/44 (50%)
Query: 924 VQSKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDT 967
+ S E++ + +++ +EE + E E P + +++S T
Sbjct: 712 ISSSEEEDEEDDEEEEEPADEEPAVGEEE-TSSPRKHKKAKSKT 754
Score = 37 (18.1 bits), Expect = 4.9e-45, Sum P(4) = 4.9e-45
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 1686 NAESYFIKNAALSAKVERLRDWFNR 1710
+AES ++++AL + +LR+ +R
Sbjct: 469 SAESEEVRHSALDFAIRQLREHQDR 493
Score = 37 (18.1 bits), Expect = 7.9e-45, Sum P(5) = 7.9e-45
Identities = 5/16 (31%), Positives = 11/16 (68%)
Query: 1465 YISAVETCKVVNLVYA 1480
Y + ++ CK + L++A
Sbjct: 1200 YENPIDVCKDIRLIFA 1215
Score = 37 (18.1 bits), Expect = 9.8e-11, Sum P(4) = 9.8e-11
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 235 NIKKLRGHRDAVYCAIFDRSG-RFVITGSDDRLV 267
N+ + +GH AV+ F G RF +T S LV
Sbjct: 336 NMIEGQGH-GAVFDCKFTPDGHRFAMTDSHGHLV 368
>DICTYBASE|DDB_G0285837 [details] [associations]
symbol:DDB_G0285837 "BRWD group protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 dictyBase:DDB_G0285837 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
EMBL:AAFI02000080 HSSP:Q03330 RefSeq:XP_638029.1
ProteinModelPortal:Q54MP8 EnsemblProtists:DDB0220685 GeneID:8625294
KEGG:ddi:DDB_G0285837 InParanoid:Q54MP8 OMA:DEITDIY Uniprot:Q54MP8
Length = 2200
Score = 314 (115.6 bits), Expect = 1.3e-55, Sum P(7) = 1.3e-55
Identities = 79/241 (32%), Positives = 121/241 (50%)
Query: 487 DNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXX 546
D IV+ S DG+ IIW R S G +W H+
Sbjct: 606 DAIVSGSYDGTVIIW----RHSGGP--KWD---HVIFNIKNTQRPNQANSHPKKVARSKA 656
Query: 547 XVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSA 606
++WS D+RF++ + I VWN++DGS + H++ YV HPF+ R+ MS+
Sbjct: 657 TFKNVIWSHDDRFIITTDYNM-IRVWNSLDGSFHLEMAEHTSEVYVTSCHPFDSRLIMSS 715
Query: 607 GYDGRTIVWDIWEGTPIR---IYEIG-RFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
GYD + I+W I G I+ + E G + +++DG FSPDG ++++ G+ ++ G G
Sbjct: 716 GYDSQVILWSIETGEIIKKFVLQEPGFQCQILDGCFSPDGQKFIVTNSTGKWFMFELGLG 775
Query: 663 ESQKDAKY----DQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEEP 718
+ K +Q+FL DY PLIRD+ GNVLD+ TQ PH + L + +PY +
Sbjct: 776 SDINNLKKLVPNEQYFLTDYHPLIRDANGNVLDELTQTPPHLMP-RAMLVNYQGLPYPDH 834
Query: 719 Y 719
Y
Sbjct: 835 Y 835
Score = 274 (101.5 bits), Expect = 1.3e-55, Sum P(7) = 1.3e-55
Identities = 60/146 (41%), Positives = 85/146 (58%)
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
P + +N + GH+ YC FD+SGR TGSDD LVK+WS + +A+ RGH
Sbjct: 337 PISFYSNFKNSLIVYGHKAPTYCLQFDKSGRLYFTGSDDHLVKVWSTYSGRLIATLRGHL 396
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGL--PISVLRGH----TGAVTAIAFSPRP 339
GDITD+ S +N+L+A+ASND VIR+W L I+ L GH +T+I+F P
Sbjct: 397 GDITDMCTSFDNSLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSISFLSNP 456
Query: 340 SAIYQLLSSSDD-GTCRIWDARYSQY 364
+ +LL SSD G C++W+ S +
Sbjct: 457 TT--RLLVSSDSFGQCKLWNLDKSNH 480
Score = 95 (38.5 bits), Expect = 1.3e-55, Sum P(7) = 1.3e-55
Identities = 41/172 (23%), Positives = 73/172 (42%)
Query: 1470 ETCKVVNLVYATFPGSGDSCCKITL-----KFVDPSSSVLGKAFKLTLPELRDFPDFVVE 1524
+ C + NL Y P G ITL + V P + F + + D PD++V
Sbjct: 1307 QECIIKNLNYFISP-DGTHKVVITLLPVFDQQVPPQNQNDESNFYTVIYHVSDIPDYLVL 1365
Query: 1525 KTLYDAAISRNWTHRDKCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYK 1584
+ ++ +WT +K + A+G W+ G I + FPNSPW+ V +
Sbjct: 1366 ASKVRKSMLTDWTVPNKRFRMFYPASG----WYNGTIIEISDSDPLFPNSPWENIKVLWD 1421
Query: 1585 -TGDSHLHSPWEMHDPNVMWEHP----EIDSESRDKLLSSFNKLEQSVSRKQ 1631
T + + WE+ + ++P EI E+ ++ + N+ +Q +Q
Sbjct: 1422 DTEEEDRVNYWEIDEKFDDDQNPQKIKEIKDENENEKVIENNQQQQQQQPQQ 1473
Score = 93 (37.8 bits), Expect = 1.3e-55, Sum P(7) = 1.3e-55
Identities = 58/286 (20%), Positives = 109/286 (38%)
Query: 1175 DHQQNDDVHKSRNEDVGTNYRDELK-ENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLP 1233
D +D+ + S + + T + ++K + R+ ++K R SPS+ + DLP
Sbjct: 959 DDDDDDEDYDSDGKKMSTRKKSKIKADKRKKRLLKQSKKFTRRNTSPSKFNEIMNTFDLP 1018
Query: 1234 SAESDPIPMSESSLCMEGNLMSEVPEEA-----EG-YGRSSSDQLLNSNLKFKVRDGSKS 1287
+ D + + + +S ++ +G DQ LN N+ D +
Sbjct: 1019 E-DDDNNSNNNNRKAVSNKRLSNKQKKRYNLINDGEIEMDDDDQYLNDNILDS--DDNDY 1075
Query: 1288 SYKTRTDIEAFDGGME-DGINHEASG--IDSPEAASGSIRKTRSMKMKIISREPIAANCN 1344
++ R D + F G +G + G DS ++ S S +N N
Sbjct: 1076 EHRNRYDNDEFSGSESYNGSDGGGGGGDDDSDNSSDNSSENDSSANGSDSDYSGSKSNKN 1135
Query: 1345 FKS-KNGHDLVGTSKTVGNSSMEAHDEFFPEEWIPTSTVKSRPRSTRNRRGDHDGHPCLL 1403
+ K+ + G K V N ++ +ST ++ T + + +
Sbjct: 1136 KRGDKSKRNKKG-KKNVKNKKVQKRGRKKSSTSSSSSTSHNQNHLTASALKKLND----I 1190
Query: 1404 SGRKSNFPVRKLSWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIE 1449
+K PV WL ++ Y PQ+GD + Y QGH +++E
Sbjct: 1191 RKKKEILPVCP-KWLSITSTTSETFYSPQVGDFIFYFYQGHTKYLE 1235
Score = 85 (35.0 bits), Expect = 4.7e-37, Sum P(6) = 4.7e-37
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLP--ISVLRGHTGAVTAIAFSPRPS 340
G +IT ++ TL+ AS D +++W P ++ L GH + A+ +S
Sbjct: 548 GKTNEITGTTMNKGGTLIV-ASVDSSLKIWSTLFNPPKLVNTLEGHPTTILALQYSHGSD 606
Query: 341 AIYQLLSSSDDGTCRIW 357
AI +S S DGT IW
Sbjct: 607 AI---VSGSYDGTVIIW 620
Score = 68 (29.0 bits), Expect = 2.5e-35, Sum P(6) = 2.5e-35
Identities = 25/109 (22%), Positives = 41/109 (37%)
Query: 213 APSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM 272
A ++ +A A +T G + + ++ G ++ D L KIWS
Sbjct: 520 ATTITTAITTTATTATATIATTTTTTTPGKTNEITGTTMNKGGTLIVASVDSSL-KIWS- 577
Query: 273 ETAF----CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDG 317
T F + + GH I L S + + S S D + +WR G
Sbjct: 578 -TLFNPPKLVNTLEGHPTTILALQYSHGSDAIVSGSYDGTVIIWRHSGG 625
Score = 64 (27.6 bits), Expect = 1.3e-55, Sum P(7) = 1.3e-55
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 1648 YLNRFPVPLYPEVIRLRLVNNYYRSLEAAKDDINVMLSNAESYFIKNAALSAKVERL 1704
Y+ P P+ I RL ++YYRSL+A D +++ +A Y N + AK +L
Sbjct: 1756 YIRFVPHPMDISTIIKRLESSYYRSLDAIYFDAKLIMIDAYVYNKPNTMV-AKNSKL 1811
Score = 59 (25.8 bits), Expect = 2.0e-34, Sum P(6) = 2.0e-34
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWS 425
C ++ +G ++ TGS D +VWS
Sbjct: 359 CLQFDKSGRLYFTGSDDHLVKVWS 382
Score = 58 (25.5 bits), Expect = 5.3e-46, Sum P(6) = 5.3e-46
Identities = 53/267 (19%), Positives = 103/267 (38%)
Query: 1140 FGSDALLDLASVRKE-ELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDEL 1198
F S L +A+ + + +L +D S N D ++ H + G ++
Sbjct: 1839 FDSFTLKSMAADKDDSQLDDEDDSMVSGVTNDDDDDDDNLANNNHGNNKSRNGDGLEGDI 1898
Query: 1199 KENPPLRVRIRT-KGILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESSLCMEGNLMSEV 1257
+ +T K I R SPSE + +V PS + ++ S
Sbjct: 1899 SISDSEHDNSKTGKNITRSLLSPSEDEGGINVNRTPSKRGRKKANATTTTTTTTTTTSST 1958
Query: 1258 PEEAEGYGRSSSDQLLNSNLKFK---VRDGSKSSYKTR---TDIEAFDGGMEDGINHEAS 1311
P + GR + + SN + D + SS++ D D ++G +++ +
Sbjct: 1959 PSKRLITGRLTRSRSNQSNEESDDDGFIDDNNSSHQNGGKILDDSDNDDKNQNGTDNDYN 2018
Query: 1312 GIDSPEAASGSI--RKTRSMKMKIISREPIAANCNFKSKNGHDLVGTSKTVGNSSMEAHD 1369
D + G +K +S+K + EPI K + + L+ + +++ E +
Sbjct: 2019 DDDDDDDNDGDSTNKKRKSIKNQT---EPIT-----KRQRTNRLIFEDEDEDDNNQEEDE 2070
Query: 1370 EFFPEEWIPTSTVK-SRPR-STRNRRG 1394
E + E+ P K + P+ +T +RG
Sbjct: 2071 EDYQEKPKPKPRSKQTTPKVTTPRKRG 2097
Score = 58 (25.5 bits), Expect = 6.8e-08, Sum P(7) = 6.8e-08
Identities = 20/71 (28%), Positives = 34/71 (47%)
Query: 554 SLDNRFVLAAIMDCRICVWNAVDGSL--VHSLTGH--SASSYVLDVHPF-NP--RIAMSA 606
S DN + A D I +WN + SLTGH S ++ + + NP R+ +S+
Sbjct: 405 SFDNSLLATASNDNVIRIWNLNSNQYDSIASLTGHDPSVNNTITSISFLSNPTTRLLVSS 464
Query: 607 GYDGRTIVWDI 617
G+ +W++
Sbjct: 465 DSFGQCKLWNL 475
Score = 57 (25.1 bits), Expect = 1.2e-08, Sum P(7) = 1.2e-08
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 304 SNDF-VIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYS 362
+ D+ +IRVW DG + HT V + P S + ++SS D +W
Sbjct: 672 TTDYNMIRVWNSLDGSFHLEMAEHTSEVYVTSCHPFDSRL--IMSSGYDSQVILWSIETG 729
Query: 363 QYSPRIYLPKP 373
+ + L +P
Sbjct: 730 EIIKKFVLQEP 740
Score = 56 (24.8 bits), Expect = 1.3e-55, Sum P(7) = 1.3e-55
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 112 NKLVERYPHIEWDHXXXXXXXXXXYKASPFHGRIGGIAPNAADVPTLLGSGSFSLL 167
N+L E+Y HI+ DH HG + P + TLLG ++S++
Sbjct: 84 NELNEKYKHIQSDHIKSIFSSYRDLAIQ--HGHFSKL-P--FQINTLLGDNAYSMI 134
Score = 56 (24.8 bits), Expect = 7.5e-44, Sum P(7) = 7.5e-44
Identities = 38/201 (18%), Positives = 77/201 (38%)
Query: 926 SKEDDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKKA 985
S DD+N + +++ + + K + +++Q++ +++ +L D +
Sbjct: 2003 SDNDDKNQNGTDNDYNDDDDDDDNDGDSTNKKRKSIKNQTEPITKRQRTNRLIFEDEDED 2062
Query: 986 LSL--EDTRVKGDDMAKLPQSSSGPPQGTTERK-----IDLSLKEPGSSSAGSGIDVGLS 1038
+ ED + P+S P+ TT RK ID S +E + DV +
Sbjct: 2063 DNNQEEDEEDYQEKPKPKPRSKQTTPKVTTPRKRGRKKIDQSEEEEDEDQS----DVNSN 2118
Query: 1039 QKH-NRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANFD 1097
N DG E + GD++++ + + +S G P N +
Sbjct: 2119 NNSDNESGGEDGYSGEDGSESESNNGGDIDDEEF---LNLLEKPKSKPKGRGRPSFKNNN 2175
Query: 1098 VHNDSIGDVNRCVKLENGHGK 1118
+N+ +VN + G G+
Sbjct: 2176 NNNNINNNVN-LTPSKRGRGR 2195
Score = 54 (24.1 bits), Expect = 1.8e-51, Sum P(8) = 1.8e-51
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 921 DSHVQSKEDDRNLQNMQQQHKREEEQTIVES-EFMGKPLELLE-SQSDTGNRKRLVLKLS 978
D+ S ED++ Q+ QQQ +++ E + GK + + S+ RK+ +LK S
Sbjct: 936 DASENSSEDEQQQQHQQQQQDDDDDDDDDEDYDSDGKKMSTRKKSKIKADKRKKRLLKQS 995
Score = 52 (23.4 bits), Expect = 8.4e-06, Sum P(6) = 8.4e-06
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 930 DRNLQNMQQQHKREEEQTIVESE 952
D ++Q QQQ +++++QTI +S+
Sbjct: 257 DIDIQQQQQQQQQQQQQTISKSK 279
Score = 51 (23.0 bits), Expect = 1.0e-05, Sum P(6) = 1.0e-05
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDV-HPFNPRIAMSAGYDGRTIVWDI 617
D + VW+ G L+ +L GH + D+ F+ + +A D +W++
Sbjct: 375 DHLVKVWSTYSGRLIATLRGHLGD--ITDMCTSFDNSLLATASNDNVIRIWNL 425
Score = 49 (22.3 bits), Expect = 2.1e-33, Sum P(6) = 2.1e-33
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 401 LCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
+C +++ ++ T S+D R+W+ S+ DS + L+GH+ VN
Sbjct: 402 MCTSFD--NSLLATASNDNVIRIWNL-NSNQYDS------IASLTGHDPSVN 444
Score = 48 (22.0 bits), Expect = 4.7e-51, Sum P(7) = 4.7e-51
Identities = 52/221 (23%), Positives = 87/221 (39%)
Query: 981 DHKKALSLEDTRVKGDDMAK--LPQSSSGPPQGTTERKI-------DLSLKEPGSSS--- 1028
D KK + + +++K D K L QS + T+ K DL + +S+
Sbjct: 970 DGKKMSTRKKSKIKADKRKKRLLKQSKKFTRRNTSPSKFNEIMNTFDLPEDDDNNSNNNN 1029
Query: 1029 --AGSGIDVGLSQKHNRIVFADGS----QDEKY--DSQLEESAGDMENKTRWAEVKIRTS 1080
A S + QK + DG D++Y D+ L+ D E++ R+ + S
Sbjct: 1030 RKAVSNKRLSNKQKKRYNLINDGEIEMDDDDQYLNDNILDSDDNDYEHRNRYDNDEFSGS 1089
Query: 1081 KRSSSSGVLLPPDANFDVHNDSIGDVNRCVKLENGHGKFSSNSETSCYGCVRSCSDKEKF 1140
+ + S D +D+ D + EN S+N S Y S S+K K
Sbjct: 1090 ESYNGSD---GGGGGGDDDSDNSSDNSS----ENDS---SANGSDSDYS--GSKSNKNKR 1137
Query: 1141 GSDALLDLASVR--KEELARHEDIKKSSSFNSTPLVDHQQN 1179
G + + + K + + KKSS+ +S+ H QN
Sbjct: 1138 GDKSKRNKKGKKNVKNKKVQKRGRKKSSTSSSSS-TSHNQN 1177
Score = 48 (22.0 bits), Expect = 1.9e-05, Sum P(6) = 1.9e-05
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 242 HRDAVY---CAIFDRSGRFVITGSDDRLVKIWSMET 274
H VY C FD R +++ D V +WS+ET
Sbjct: 695 HTSEVYVTSCHPFD--SRLIMSSGYDSQVILWSIET 728
Score = 46 (21.3 bits), Expect = 1.1e-46, Sum P(7) = 1.1e-46
Identities = 15/81 (18%), Positives = 37/81 (45%)
Query: 1165 SSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKSPS--- 1221
+S+ +T + +++ + + N + N + K+N LR++I+ + D K +
Sbjct: 1671 TSNTTTTTTTTTETSNNNNNNNNNNNNNNNNNNFKDNI-LRIKIQYVESIEDEKIENLKK 1729
Query: 1222 EQKSSTSVKDLPSAESDPIPM 1242
E K ++ S+P+ +
Sbjct: 1730 EMKEFLENDEITDIYSEPVDL 1750
Score = 45 (20.9 bits), Expect = 1.5e-50, Sum P(8) = 1.5e-50
Identities = 29/137 (21%), Positives = 55/137 (40%)
Query: 1048 DGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSS--SSGVLLPPDAN-----FDVHN 1100
D DE YDS ++ + ++K + + K R K+S + P N FD+
Sbjct: 960 DDDDDEDYDSDGKKMSTRKKSKIKADKRKKRLLKQSKKFTRRNTSPSKFNEIMNTFDLPE 1019
Query: 1101 DSIGDVNRCVKLENGHGKFSSNSETSCYGCVRS----CSDKEKFGSDALLDLASVRKEEL 1156
D + N + + + S N + Y + D +++ +D +LD E
Sbjct: 1020 DDDNNSNNNNRKAVSNKRLS-NKQKKRYNLINDGEIEMDDDDQYLNDNILDSDDNDYEHR 1078
Query: 1157 ARHE--DIKKSSSFNST 1171
R++ + S S+N +
Sbjct: 1079 NRYDNDEFSGSESYNGS 1095
Score = 44 (20.5 bits), Expect = 1.6e-45, Sum P(8) = 1.6e-45
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 919 LQDSHVQSKEDDRNLQNMQQQHKREEEQTIVES 951
++D + K + N Q QQQ +++ +Q +++
Sbjct: 1450 IKDENENEKVIENNQQQQQQQPQQQPQQQPIQN 1482
Score = 42 (19.8 bits), Expect = 1.8e-51, Sum P(8) = 1.8e-51
Identities = 15/69 (21%), Positives = 28/69 (40%)
Query: 1160 EDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKS 1219
+D +SS NS+ D S ++ D+ K N + ++ K + + +
Sbjct: 1103 DDDSDNSSDNSSENDSSANGSDSDYSGSKSNKNKRGDKSKRNKKGKKNVKNKKVQKRGRK 1162
Query: 1220 PSEQKSSTS 1228
S SS+S
Sbjct: 1163 KSSTSSSSS 1171
Score = 42 (19.8 bits), Expect = 2.9e-50, Sum P(8) = 2.9e-50
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 781 ENEVISDDNDSE----YNIAEECASEAEQGRD 808
+N + SDDND E Y+ E SE+ G D
Sbjct: 1065 DNILDSDDNDYEHRNRYDNDEFSGSESYNGSD 1096
Score = 42 (19.8 bits), Expect = 1.2e-35, Sum P(6) = 1.2e-35
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 91 SRSGVNSGNDNDDGI 105
S+S +N+GN ND+ I
Sbjct: 491 SQSTINTGNINDEQI 505
Score = 40 (19.1 bits), Expect = 4.1e-45, Sum P(8) = 4.1e-45
Identities = 6/24 (25%), Positives = 15/24 (62%)
Query: 928 EDDRNLQNMQQQHKREEEQTIVES 951
+DD+N Q +++ E + ++E+
Sbjct: 1439 DDDQNPQKIKEIKDENENEKVIEN 1462
Score = 39 (18.8 bits), Expect = 1.3e-55, Sum P(7) = 1.3e-55
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVW 424
L+ H IL Y+ V+GS D +W
Sbjct: 589 LEGHPTTILALQYSHGSDAIVSGSYDGTVIIW 620
Score = 38 (18.4 bits), Expect = 4.7e-44, Sum P(7) = 4.7e-44
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 880 RPQRVAARNARSMFSRIT 897
+P + A+N++ +F RI+
Sbjct: 1800 KPNTMVAKNSKLVFHRIS 1817
Score = 38 (18.4 bits), Expect = 1.3e-27, Sum P(7) = 1.3e-27
Identities = 13/37 (35%), Positives = 16/37 (43%)
Query: 1169 NSTPLVDHQQN--DDVHKSRNEDVGTNYRDELKENPP 1203
N LV ++Q D H D N DEL + PP
Sbjct: 780 NLKKLVPNEQYFLTDYHPLIR-DANGNVLDELTQTPP 815
Score = 37 (18.1 bits), Expect = 5.8e-45, Sum P(7) = 5.8e-45
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 758 PLEDLERMMEPVPEFIDPVYWEPENEVISDDNDSEYN-IAEECASE 802
P E+++ + + E YWE + + D N + I +E +E
Sbjct: 1412 PWENIKVLWDDTEEEDRVNYWEIDEKFDDDQNPQKIKEIKDENENE 1457
Score = 37 (18.1 bits), Expect = 5.4e-28, Sum P(6) = 5.4e-28
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 411 VFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEND 450
+F + SD A ++S ED +Q H+ ++D
Sbjct: 922 IFPSDPSDEDFNPSDASENSSEDEQQQQHQQQQQDDDDDD 961
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 192 (72.6 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 40/125 (32%), Positives = 67/125 (53%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I + GH ++ F G+F+ T S D+ VKIW+M C + GH+ + D A S+
Sbjct: 72 ISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWSA 131
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ + +AS+D ++++ +P L+GHT V F+P+ S + +S S D + R
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLV---VSGSFDESVR 188
Query: 356 IWDAR 360
IWD R
Sbjct: 189 IWDVR 193
Score = 181 (68.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 38/130 (29%), Positives = 67/130 (51%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V ++ K L+GH + V+C F+ V++GS D V+IW + T C+ + H ++
Sbjct: 150 VPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVS 209
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSS 348
++ + + +L+ S S D ++R+W +G + L V + FSP I LSS
Sbjct: 210 AVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYI---LSS 266
Query: 349 SDDGTCRIWD 358
+ D T ++WD
Sbjct: 267 NLDNTLKLWD 276
Score = 159 (61.0 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L GH+ V + + ++T SDD+ +KI+ + T + +GH + +
Sbjct: 115 RTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQ 174
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
++LV S S D +R+W + G+ + L H+ V+A++F+ R ++ + S S DG RI
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFN-RDGSL--ITSGSYDGLVRI 231
Query: 357 WDARYSQ 363
WD Q
Sbjct: 232 WDTANGQ 238
Score = 121 (47.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 30/124 (24%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G + +GS D LV+IW C+ + E + + S
Sbjct: 198 VKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFS 257
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + S++ D +++W G + +GH I + + ++S S+D
Sbjct: 258 PNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKI 317
Query: 355 RIWD 358
+W+
Sbjct: 318 YVWN 321
Score = 95 (38.5 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ DC+I VWN +V SL GH+ + D HP IA A TI +W
Sbjct: 306 KWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 85 (35.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 27/108 (25%), Positives = 49/108 (45%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
V++ D + +W+ G V +L HS + + I S YDG +WD
Sbjct: 178 VVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLIT-SGSYDGLVRIWDTAN 236
Query: 620 GTPIR-IYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
G ++ + + + KFSP+G I+ S+ + L + G+G++ K
Sbjct: 237 GQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLK 284
Score = 67 (28.6 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 22/115 (19%), Positives = 47/115 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V+ + ++ D + + D + +W+ +G V +L N + +S+
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSN 267
Query: 608 YDGRTIVWDIWEGTPIRIY---EIGRFKLVDGKFSPDGTSIVLSDDVG-QIYLLN 658
D +WD +G ++ Y E ++ + FS G ++S +IY+ N
Sbjct: 268 LDNTLKLWDFGKGKTLKQYQGHENNKY-CIFANFSVTGGKWIISGSEDCKIYVWN 321
Score = 62 (26.9 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSA----CKSSVEDSEQP 437
S + ++N +G++ +GS D R+W C ++ D E P
Sbjct: 205 SDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENP 249
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 198 (74.8 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 46/129 (35%), Positives = 70/129 (54%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+++K L GH A+ C F G + + S D+ + +WS + GH I+DLA
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93
Query: 294 SSNNTLVASASNDFVIRVW--RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
SS++ SAS+D +R+W R P + VLRGHT V + F+P PS + ++S S D
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYEC-LKVLRGHTNFVFCVNFNP-PSNL--IVSGSFD 149
Query: 352 GTCRIWDAR 360
T RIW+ +
Sbjct: 150 ETIRIWEVK 158
Score = 170 (64.9 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 33/126 (26%), Positives = 67/126 (53%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAF-CLASCRGHEGDITDLAVS 294
I + GH + + + + SDD ++IW + + CL RGH + + +
Sbjct: 78 IHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFN 137
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ S S D IR+W + G + +++ H+ ++++ F+ R ++ ++S+S DG+C
Sbjct: 138 PPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFN-RDGSL--IVSASHDGSC 194
Query: 355 RIWDAR 360
+IWDA+
Sbjct: 195 KIWDAK 200
Score = 155 (59.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 34/122 (27%), Positives = 64/122 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K LRGH + V+C F+ +++GS D ++IW ++T C+ + H I+ + +
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ SAS+D ++W +G + L + AV+ FSP I L ++ D T
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFI---LVATLDSTL 237
Query: 355 RI 356
++
Sbjct: 238 KL 239
Score = 100 (40.3 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 31/113 (27%), Positives = 51/113 (45%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP--RIAMSAGYDGRTIV 614
+ +++ D I +W G V + HS + VH FN + +SA +DG +
Sbjct: 140 SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP--ISSVH-FNRDGSLIVSASHDGSCKI 196
Query: 615 WDIWEGTPIRIYEIGRFKLVD-GKFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
WD EGT ++ + V KFSP+G I+++ + L N G+ K
Sbjct: 197 WDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLK 249
Score = 63 (27.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 14/65 (21%), Positives = 34/65 (52%)
Query: 553 WSLDN-RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGR 611
+S+ N +++++ D + +W+ +++ L GH+ + + HP I+ S + +
Sbjct: 265 FSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDK 324
Query: 612 TI-VW 615
TI +W
Sbjct: 325 TIRIW 329
Score = 63 (27.2 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 16/72 (22%), Positives = 32/72 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMS 605
V+ +S + +F+L A +D + + N G + TGH+ + + N + +S
Sbjct: 216 VSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVS 275
Query: 606 AGYDGRTIVWDI 617
D +WD+
Sbjct: 276 GSEDNCVYLWDL 287
Score = 52 (23.4 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 405 YNANGTVFVTGSSDTFARVWSA----CKSSVEDSEQP 437
+N +G++ V+ S D ++W A C ++ D + P
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSP 214
Score = 48 (22.0 bits), Expect = 9.3e-13, Sum P(2) = 9.3e-13
Identities = 19/112 (16%), Positives = 47/112 (41%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + ++ D +++A D +W+A +G+ + +L + + N + + A
Sbjct: 173 ISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVAT 232
Query: 608 YDGRTIVWDIWEGTPIRIY--EIGRFKLVDGKFS-PDGTSIVLSDDVGQIYL 656
D + + G +++Y + + FS +G IV + +YL
Sbjct: 233 LDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYL 284
Score = 41 (19.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 397 SHQILCC--AYNA-NGTVFVTGSSDTFARVW 424
++++ C A++ NG V+GS D +W
Sbjct: 255 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 194 (73.4 bits), Expect = 7.0e-18, Sum P(4) = 7.0e-18
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 199 SLREI-GGG-FKKHHRAPSVCSACYAIAKPSTMVQKMQNIKK-LRGHRDAVYCAIFDRSG 255
SL++ GGG F + AC + + + ++K + G D +
Sbjct: 15 SLKQFYGGGPFIVSSDGSFIACACGDVI--NIVDSTDSSVKSTIEGESDTLTALALSPDD 72
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
+ + + R +++W +ET C+ S +GHEG + +A ++ L+A+A D + VW +
Sbjct: 73 KLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD 132
Query: 316 DGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
G RGH G V++I F P + L+S SDD T R+WD
Sbjct: 133 GGFCTHYFRGHKGVVSSILFHPDSNKNI-LISGSDDATVRVWD 174
Score = 161 (61.7 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 51/225 (22%), Positives = 93/225 (41%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ ++ I+ +GH V SG + T DR V +W ++ FC RGH+G ++
Sbjct: 89 LETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVS 148
Query: 290 DLAV--SSNNTLVASASNDFVIRVWRL----PDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
+ SN ++ S S+D +RVW L + ++++ H AVT+IA S ++
Sbjct: 149 SILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLF 208
Query: 344 QLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCC 403
S+ D +WD + + +A+T L +
Sbjct: 209 ---SAGRDKVVNLWDLHDYSCKATVATYEVLEAVT--TVSSGTPFASFVASLDQKKSKKK 263
Query: 404 AYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHE 448
++ T F+T R+W + + S+ EQ ++ V S E
Sbjct: 264 ESDSQATYFITVGERGVVRIWKS-EGSICLYEQKSSDITVSSDDE 307
Score = 161 (61.7 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 40/128 (31%), Positives = 66/128 (51%)
Query: 241 GHR-DAVYCAIFDRSGRFVITGSDDRLVKIWSM-------ETAFCLAS---CRGHEGDIT 289
GH D + A +S F ++GS DR +K+WS+ E L + H+ DI
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDIN 503
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+AV+ N++LV + S D +WRLPD + + L+GH + ++ FS + +++S
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCV---MTAS 560
Query: 350 DDGTCRIW 357
D T +IW
Sbjct: 561 GDKTVKIW 568
Score = 148 (57.2 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 31/111 (27%), Positives = 55/111 (49%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
R+ V TGS+DR IW + + + +GH+ I + S+ + V +AS D +++W
Sbjct: 509 RNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQ 363
+ DG + GHT +V +F + Q +S DG ++W+ S+
Sbjct: 569 AISDGSCLKTFEGHTSSVLRASFITDGT---QFVSCGADGLLKLWNVNTSE 616
Score = 125 (49.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 237 KKLRGHRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DLA 292
K+L G+ + + F D +F+ ++ V+++ + T C GH+ + D
Sbjct: 352 KRLVGYNEEIADMKFLGDEE-QFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTC 410
Query: 293 VSSN-NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
VSS+ N L+ + S D +R+W I V GH G + A+AF+ + + + +S S D
Sbjct: 411 VSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFF--VSGSGD 468
Query: 352 GTCRIW 357
T ++W
Sbjct: 469 RTLKVW 474
Score = 89 (36.4 bits), Expect = 7.0e-18, Sum P(4) = 7.0e-18
Identities = 31/127 (24%), Positives = 53/127 (41%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLT--GHSASSYVLDVHPFNPRIAMS 605
+N + + ++ V D +W D LVH +T GH + ++ + + M+
Sbjct: 502 INSVAVARNDSLVCTGSEDRTASIWRLPD--LVHVVTLKGHKRRIFSVEFSTVD-QCVMT 558
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
A D +W I +G+ ++ +E ++ F DGT V G + L N E
Sbjct: 559 ASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECI 618
Query: 666 KDAKYDQ 672
A YDQ
Sbjct: 619 --ATYDQ 623
Score = 86 (35.3 bits), Expect = 7.0e-18, Sum P(4) = 7.0e-18
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 400 ILCCAYNANG-TVFVTGSSDTFARVWSACKSSVEDSEQPIH--ELDVLSGHENDVNYV 454
IL A+ + FV+GS D +VWS S EDSE+PI+ V++ H+ D+N V
Sbjct: 449 ILAVAFAKKSFSFFVSGSGDRTLKVWSLDGIS-EDSEEPINLKTRSVVAAHDKDINSV 505
Score = 65 (27.9 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 283 GHEGDITDLA-VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
G+ +I D+ + +A A+N +RV+ + VL GH V ++ S
Sbjct: 356 GYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSG 415
Query: 342 IYQLLSSSDDGTCRIWDA 359
+++ S D T R+W+A
Sbjct: 416 NVLIVTGSKDKTVRLWNA 433
Score = 61 (26.5 bits), Expect = 2.3e-15, Sum P(4) = 2.3e-15
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
C ++ + VTGS D R+W+A S + V +GH D+ V F+
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSC---------IGVGTGHNGDILAVAFA 455
Score = 52 (23.4 bits), Expect = 1.8e-14, Sum P(4) = 1.8e-14
Identities = 20/82 (24%), Positives = 35/82 (42%)
Query: 406 NANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRS 465
++N + ++GS D RVW + +++E+ L ++ H + V + S + S
Sbjct: 155 DSNKNILISGSDDATVRVWDL---NAKNTEKKC--LAIMEKHFSAVTSIALSEDGLTLFS 209
Query: 466 AMSDAFKEENVPKFKNSWFCHD 487
A D K N W HD
Sbjct: 210 AGRD--------KVVNLWDLHD 223
Score = 48 (22.0 bits), Expect = 2.2e-10, Sum P(4) = 2.2e-10
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 552 VWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGR 611
V S N ++ D + +WNA S + TGH+ + + +S D R
Sbjct: 411 VSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGD-R 469
Query: 612 TI-VWDI 617
T+ VW +
Sbjct: 470 TLKVWSL 476
Score = 40 (19.1 bits), Expect = 7.0e-18, Sum P(4) = 7.0e-18
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 921 DSHVQSKEDDRNLQNMQQQHKREEEQTIVESEF 953
DS KEDD + +E E ++++E+
Sbjct: 654 DSTASDKEDDFRKEEEAILRGQELENAVLDAEY 686
Score = 38 (18.4 bits), Expect = 1.1e-17, Sum P(4) = 1.1e-17
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 929 DDRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKKALSL 988
D ++ + ++++E+ ++ + M + + E + +T +RKR K + +KK L
Sbjct: 812 DPETVETEYPKDEKKKEKDVIAA--MEQDTD--ELKQETPSRKRKSQKSKGKSNKKRLIA 867
Query: 989 E 989
E
Sbjct: 868 E 868
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 244 (91.0 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 109/450 (24%), Positives = 175/450 (38%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L H V +F G+ +++GS D VKIW T L + GH G + LA S +
Sbjct: 746 LENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGK 805
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I +W G + GH ++ ++AF+P +L S+SDD T +IWD
Sbjct: 806 LLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGK---ELASASDDSTIKIWD 862
Query: 359 AR----------YSQ------YSP--RIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQI 400
+SQ +SP ++ D+ T K +S +
Sbjct: 863 LATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDS-TIKVWNPATGELQQSLEGRSGWV 921
Query: 401 LCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCA 460
A++ +G +GS ++W+ + L L GH V V FS
Sbjct: 922 KSVAFSPDGKKLASGSEKNTVKLWNPATGEL---------LQTLEGHSQSVRSVAFSPDG 972
Query: 461 VASRSAMSDA-FKEEN--VPKFKNSWFCHD---NIVTCSRDGSAIIWIPRSRRSHGKVGR 514
S+ SD K N + + ++ HD V S DG ++ S +
Sbjct: 973 KQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLV----SGSDDNTIKL 1028
Query: 515 WTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNA 574
W A V+ + +S D++ + ++ +D I +W++
Sbjct: 1029 WDLA---------------TSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDS 1073
Query: 575 VDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLV 634
G L +L GHS + P + ++ S YDG +W+ G ++ GR V
Sbjct: 1074 ATGELQRTLEGHSQGVRSVTFSP-DGKLLASNSYDGTIKLWNPLTGE-LQQTLTGRSDWV 1131
Query: 635 DG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
D FSPDG + I L ++ GE
Sbjct: 1132 DSVAFSPDGKQLASGYYDSTIKLWDSATGE 1161
Score = 170 (64.9 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 57/239 (23%), Positives = 96/239 (40%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ GH +++ F G+ + + SDD +KIW + T + H + +A S
Sbjct: 827 LQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSP 886
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ L+AS+S D I+VW G L G +G V ++AFSP +L S S+ T +
Sbjct: 887 DGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGK---KLASGSEKNTVK 943
Query: 356 IWDARYSQ-------YSPRI----YLPKPPDAITGKXXXXXXXXXXXXXXLQS----HQ- 399
+W+ + +S + + P + LQ H
Sbjct: 944 LWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDL 1003
Query: 400 -ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
I A++ +G V+GS D ++W S ++ S L H V+ V FS
Sbjct: 1004 WIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQS---------LEDHSRSVHAVAFS 1053
Score = 167 (63.8 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 39/123 (31%), Positives = 61/123 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V F G+ + +GS D + +W T L + GH I +A +
Sbjct: 785 LQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAP 844
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ +ASAS+D I++W L G L H+ +V ++AFSP L SSS D T +
Sbjct: 845 DGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKL---LASSSLDSTIK 901
Query: 356 IWD 358
+W+
Sbjct: 902 VWN 904
Score = 163 (62.4 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH +V F G+ + + S D +K+W+ T + +GH+ I +A S
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSP 1012
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ + S S+D I++W L L H+ +V A+AFSP QL SSS D T +
Sbjct: 1013 DGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDK---QLASSSLDSTIK 1069
Query: 356 IWDA 359
+WD+
Sbjct: 1070 LWDS 1073
Score = 150 (57.9 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/121 (31%), Positives = 58/121 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L G D V F G+ + +G D +K+W T L + GH I + S +
Sbjct: 1124 LTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGK 1183
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG-TCRIW 357
L+AS S D ++W G + + GH+ V ++AFSP +LL+SS G T ++W
Sbjct: 1184 LLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDG----KLLASSSYGETIKLW 1239
Query: 358 D 358
D
Sbjct: 1240 D 1240
Score = 141 (54.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 35/123 (28%), Positives = 58/123 (47%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH D + +F G+ + +GS D+ K+W T L GH + +A S
Sbjct: 1163 LQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSP 1222
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ L+AS+S I++W G + L + ++AFSP + L+S D +
Sbjct: 1223 DGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNR----LASVDIFDTK 1278
Query: 356 IWD 358
IWD
Sbjct: 1279 IWD 1281
Score = 140 (54.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 33/122 (27%), Positives = 54/122 (44%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L GH V F G+ + + S D +K+W+ T + G + +A S +
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPD 1139
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+AS D I++W G + L GH+ + ++ FSP L S S D T ++
Sbjct: 1140 GKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKL---LASGSYDQTAKL 1196
Query: 357 WD 358
WD
Sbjct: 1197 WD 1198
Score = 135 (52.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 34/123 (27%), Positives = 55/123 (44%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L H +V+ F + + + S D +K+W T + GH + + S +
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD 1097
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
L+AS S D I++W G L G + V ++AFSP QL S D T ++
Sbjct: 1098 GKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGK---QLASGYYDSTIKL 1154
Query: 357 WDA 359
WD+
Sbjct: 1155 WDS 1157
Score = 119 (46.9 bits), Expect = 9.5e-15, Sum P(2) = 9.5e-15
Identities = 35/118 (29%), Positives = 59/118 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V+ + +S D + + + D I +W++ G L+ +L GHS + P + ++ S
Sbjct: 1131 VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGS 1189
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQ-IYLLNTGQGE 663
YD +WD G ++I+E G K V+ FSPDG ++ S G+ I L + GE
Sbjct: 1190 YDQTAKLWDPATGELLQIFE-GHSKWVESVAFSPDG-KLLASSSYGETIKLWDPVTGE 1245
Score = 101 (40.6 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 34/120 (28%), Positives = 54/120 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S D + +++ D I +W+ L SL HS S + + P + ++A S+
Sbjct: 1005 IRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLA-SSS 1063
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
D +WD G R E G + V FSPDG + + G I L N GE Q+
Sbjct: 1064 LDSTIKLWDSATGELQRTLE-GHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQ 1122
Score = 59 (25.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D + + ++ I +W+ V G L+ +L S+ + P R+A
Sbjct: 1215 VESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDI 1274
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVL 647
+D T +WD G ++ + G K V + G SI L
Sbjct: 1275 FD--TKIWDPATGELLQALK-GHSKWVWSRTGA-GISIFL 1310
>DICTYBASE|DDB_G0287635 [details] [associations]
symbol:prpf4 "pre-mRNA processing factor 4"
species:44689 "Dictyostelium discoideum" [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287635
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000103 GO:GO:0000398
InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0046540
InterPro:IPR014906 Pfam:PF08799 KO:K12662 OMA:CIATVSH
RefSeq:XP_637144.1 ProteinModelPortal:Q54K20 STRING:Q54K20
EnsemblProtists:DDB0233058 GeneID:8626239 KEGG:ddi:DDB_G0287635
InParanoid:Q54K20 ProtClustDB:CLSZ2497485 Uniprot:Q54K20
Length = 600
Score = 236 (88.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 50/143 (34%), Positives = 80/143 (55%)
Query: 227 STMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAF-CLASCRGHE 285
+T+ + Q I L GH D V F GR++ T S+D+ ++W +E+ CL GH
Sbjct: 371 ATVSIETQPILSLEGHSDVVNRCSFHPCGRYITTSSNDKSWRLWDLESGGKCLLDQEGHS 430
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQL 345
+ +++ S+ +L+A+ S D ++R+W L G PI +GH+ V ++ +SP YQL
Sbjct: 431 DGVMGISIQSDGSLLATGSQDGLVRIWDLRSGRPILYFQGHSKQVISVDWSPNG---YQL 487
Query: 346 LSSSDDGTCRIWDARYSQYSPRI 368
SSS+D T IWD R + S +I
Sbjct: 488 ASSSEDNTVVIWDIRKKEQSCQI 510
Score = 50 (22.7 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIW 618
++ D +I W+ S + + GHS+ +D+ N +I +S +D +T W IW
Sbjct: 543 YLATCSFDGKIKTWSPNTWSPLATFEGHSSKVTSIDLT--NSKI-LSTSFD-KT--WKIW 596
Score = 46 (21.3 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 485 CHDNIVTCSRDGSAIIWIPRS 505
C + + TCS DG W P +
Sbjct: 540 CVNYLATCSFDGKIKTWSPNT 560
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 236 (88.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 64/220 (29%), Positives = 99/220 (45%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K L GH VY F +++++GS+D+ V++WSM+T L S +GH + D++ S
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
A+AS+D R+W P+ + GH V ++F P+ Y SSD TCR+
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSF--HPNGCYVFTGSSDK-TCRM 635
Query: 357 WDARYSQYSPRIYL--PKP-------PDA---ITGKXXXXXXX----XXXXXXXLQSH-- 398
WD S R++L P PD TG ++ H
Sbjct: 636 WDVSTGD-SVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK 694
Query: 399 -QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQP 437
I +Y+ G V ++G +D RVW K++ E S +P
Sbjct: 695 NAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEP 734
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 190 (71.9 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 40/122 (32%), Positives = 67/122 (54%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH ++ A F G+++ T S D+ VKIW+M+ C + GH+ + D+A SS++
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
V SAS+D ++++ + L+GH V F+P+ S + +S S D + RIWD
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV---VSGSFDESVRIWD 199
Query: 359 AR 360
+
Sbjct: 200 VK 201
Score = 185 (70.2 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 38/123 (30%), Positives = 66/123 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K L+GH + V+C F+ V++GS D V+IW ++T C+ + H ++ ++ + +
Sbjct: 165 KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD 224
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+L+AS S D ++R+W +G I L V + FSP I L+S+ D T +
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI---LASNLDSTLK 281
Query: 356 IWD 358
+WD
Sbjct: 282 LWD 284
Score = 162 (62.1 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L GH+ V + R V++ SDD+ +KI+ + T+ + +GH + +
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
++LV S S D +R+W + G+ I L H+ V+A++F+ R ++ + S S DG RI
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSL--IASGSYDGLVRI 239
Query: 357 WDARYSQ 363
WD Q
Sbjct: 240 WDTANGQ 246
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
IK L H D V F+R G + +GS D LV+IW C+ + E + + S
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +++ D +++W G + GH + I + + ++S S+D
Sbjct: 266 PNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKI 325
Query: 355 RIWD 358
IW+
Sbjct: 326 YIWN 329
Score = 85 (35.0 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 27/108 (25%), Positives = 49/108 (45%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
V++ D + +W+ G + +L HS + + IA S YDG +WD
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIA-SGSYDGLVRIWDTAN 244
Query: 620 GTPIR-IYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
G I+ + + + KFSP+G I+ S+ + L + +G++ K
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLK 292
Score = 83 (34.3 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSA-GYDGRTIVW 615
+++++ DC+I +WN +V L GH+ D HP IA A D + +W
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 69 (29.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V + +S + +++LA+ +D + +W+ G + TGH S Y + + + +S
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 606 AGYDGRTIVWDI 617
D + +W++
Sbjct: 319 GSEDCKIYIWNL 330
Score = 63 (27.2 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 20/115 (17%), Positives = 47/115 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V+ + ++ D + + D + +W+ +G + +L N + +++
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASN 275
Query: 608 YDGRTIVWDIWEGTPIRIY---EIGRFKLVDGKFSPDGTSIVLSDDVG-QIYLLN 658
D +WD +G ++ Y E ++ + FS G ++S +IY+ N
Sbjct: 276 LDSTLKLWDFSKGKTLKQYTGHENSKY-CIFANFSVTGGKWIISGSEDCKIYIWN 329
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 190 (71.9 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 40/122 (32%), Positives = 67/122 (54%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH ++ A F G+++ T S D+ VKIW+M+ C + GH+ + D+A SS++
Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSR 142
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
V SAS+D ++++ + L+GH V F+P+ S + +S S D + RIWD
Sbjct: 143 CVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLV---VSGSFDESVRIWD 199
Query: 359 AR 360
+
Sbjct: 200 VK 201
Score = 185 (70.2 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 38/123 (30%), Positives = 66/123 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K L+GH + V+C F+ V++GS D V+IW ++T C+ + H ++ ++ + +
Sbjct: 165 KTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRD 224
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+L+AS S D ++R+W +G I L V + FSP I L+S+ D T +
Sbjct: 225 GSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYI---LASNLDSTLK 281
Query: 356 IWD 358
+WD
Sbjct: 282 LWD 284
Score = 162 (62.1 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 38/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L GH+ V + R V++ SDD+ +KI+ + T+ + +GH + +
Sbjct: 123 RTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ 182
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
++LV S S D +R+W + G+ I L H+ V+A++F+ R ++ + S S DG RI
Sbjct: 183 SSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFN-RDGSL--IASGSYDGLVRI 239
Query: 357 WDARYSQ 363
WD Q
Sbjct: 240 WDTANGQ 246
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/124 (25%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
IK L H D V F+R G + +GS D LV+IW C+ + E + + S
Sbjct: 206 IKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS 265
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +++ D +++W G + GH + I + + ++S S+D
Sbjct: 266 PNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKI 325
Query: 355 RIWD 358
IW+
Sbjct: 326 YIWN 329
Score = 85 (35.0 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 27/108 (25%), Positives = 49/108 (45%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
V++ D + +W+ G + +L HS + + IA S YDG +WD
Sbjct: 186 VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIA-SGSYDGLVRIWDTAN 244
Query: 620 GTPIR-IYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
G I+ + + + KFSP+G I+ S+ + L + +G++ K
Sbjct: 245 GQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLK 292
Score = 83 (34.3 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSA-GYDGRTIVW 615
+++++ DC+I +WN +V L GH+ D HP IA A D + +W
Sbjct: 314 KWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 69 (29.3 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V + +S + +++LA+ +D + +W+ G + TGH S Y + + + +S
Sbjct: 259 VAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIIS 318
Query: 606 AGYDGRTIVWDI 617
D + +W++
Sbjct: 319 GSEDCKIYIWNL 330
Score = 63 (27.2 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 20/115 (17%), Positives = 47/115 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V+ + ++ D + + D + +W+ +G + +L N + +++
Sbjct: 216 VSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASN 275
Query: 608 YDGRTIVWDIWEGTPIRIY---EIGRFKLVDGKFSPDGTSIVLSDDVG-QIYLLN 658
D +WD +G ++ Y E ++ + FS G ++S +IY+ N
Sbjct: 276 LDSTLKLWDFSKGKTLKQYTGHENSKY-CIFANFSVTGGKWIISGSEDCKIYIWN 329
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 199 (75.1 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 38/124 (30%), Positives = 69/124 (55%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+++ GH + + F RF+++ SDD+ +K+W +ET + + GH + +
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ ++ S S D +R+W + G + VL H+ VTA+ F+ R ++ ++SSS DG CR
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN-RDGSL--IVSSSYDGLCR 180
Query: 356 IWDA 359
IWD+
Sbjct: 181 IWDS 184
Score = 167 (63.8 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
Identities = 45/145 (31%), Positives = 70/145 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET-----AFCLASCRGHEGDITDLAV 293
L H AV F GR + + S D+ ++ +++ T A + GHE I+D+A
Sbjct: 20 LTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAF 79
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
SS+ + SAS+D +++W + G I L GHT + F+P+ + I +S S D T
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI---VSGSFDET 136
Query: 354 CRIWDARYSQYSPRIYLPKPPDAIT 378
RIWD + LP D +T
Sbjct: 137 VRIWDVTTGKCLK--VLPAHSDPVT 159
Score = 129 (50.5 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 34/121 (28%), Positives = 62/121 (51%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAM--S 605
++ + +S D RF+++A D + +W+ GSL+ +L GH+ +Y V+ FNP+ M S
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHT--NYAFCVN-FNPQSNMIVS 130
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G +++ + F+ DG+ IV S G + ++G G
Sbjct: 131 GSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCV 190
Query: 666 K 666
K
Sbjct: 191 K 191
Score = 126 (49.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/124 (23%), Positives = 55/124 (44%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW T C+ + E ++ + S
Sbjct: 148 LKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFS 207
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + + D +R+W + + GH A I+ + + +++S S+D
Sbjct: 208 PNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCV 267
Query: 355 RIWD 358
+W+
Sbjct: 268 HMWE 271
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD---ITDLAVSSNNTLVASASNDF 307
F +G+F++ G+ D +++W++ +A L + GH I+ +N + S S D
Sbjct: 206 FSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN 265
Query: 308 VIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+ +W L + L GHT V +A P + I S S D T RIW
Sbjct: 266 CVHMWELNSKKLLQKLEGHTETVMNVACHPTENLI---ASGSLDKTVRIW 312
Score = 120 (47.3 bits), Expect = 0.00094, P = 0.00094
Identities = 24/80 (30%), Positives = 42/80 (52%)
Query: 236 IKKLRGHRDAVYC--AIFD-RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH +A YC + F +G+ +++GS+D V +W + + L GH + ++A
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVA 292
Query: 293 VSSNNTLVASASNDFVIRVW 312
L+AS S D +R+W
Sbjct: 293 CHPTENLIASGSLDKTVRIW 312
Score = 68 (29.0 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 15/72 (20%), Positives = 33/72 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMS 605
V+ + +S + +F+L +D + +WN + + TGH + Y + N + +S
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVS 260
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 261 GSEDNCVHMWEL 272
Score = 58 (25.5 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSA----CKSSVEDSEQP 437
S + +N +G++ V+ S D R+W + C ++ D E P
Sbjct: 155 SDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENP 199
Score = 49 (22.3 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
R V + +C + +W L+ L GH+ + + HP IA S D +W
Sbjct: 257 RIVSGSEDNC-VHMWELNSKKLLQKLEGHTETVMNVACHPTENLIA-SGSLDKTVRIW 312
Score = 39 (18.8 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 408 NGTVFVTGSSDTFARVW 424
NG V+GS D +W
Sbjct: 254 NGKRIVSGSEDNCVHMW 270
Score = 38 (18.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 438 IHELDVLSGHENDVNYVQFS--GCAVASRSA 466
+H L+ H V+ V+FS G +AS SA
Sbjct: 15 VHS-QTLTSHNRAVSSVKFSSDGRLLASASA 44
Score = 37 (18.1 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACK 428
L+ H ++ A + + +GS D R+W+ K
Sbjct: 281 LEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 197 (74.4 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 50/150 (33%), Positives = 80/150 (53%)
Query: 212 RAPSVCSACYAIAKPSTMVQKMQNIK-KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIW 270
RA SA +KP T V+ +K L GH AV F +G ++ + S D+L+KIW
Sbjct: 14 RAQPAPSAAATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
Query: 271 SMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAV 330
+ GH+ I+D+A SS++ L+ SAS+D +++W + G + L+GH+ V
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 331 TAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
F+P+ + I +S S D + RIWD +
Sbjct: 133 FCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 170 (64.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH + V+C F+ +++GS D V+IW ++T CL + H ++ + +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ S+S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 236 IKKLRGHRDAVYCAIFDRS---GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH++ YC + S G+++++GS+D LV IW+++T + +GH + A
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 308
Query: 293 VSSNNTLVASAS--NDFVIRVWR 313
++ASA+ ND I++W+
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 118 (46.6 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ + WS D+ +++A D + +W+ G + +L GHS +YV + FNP+ + +S
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN-FNPQSNLIVS 146
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G ++ + F+ DG+ IV S G + +T G+
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 666 K 666
K
Sbjct: 207 K 207
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +A+ D +++W G + GH I + + ++S S+D
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 355 RIWD 358
IW+
Sbjct: 284 YIWN 287
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN-DVNYV- 454
S+ + CC +N + V+GS D R+W K+ P H V + H N D + +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 455 --QFSG-CAV---ASRSAMSDAFKEENVP 477
+ G C + AS + ++N P
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 72 (30.4 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 68 (29.0 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRI 368
L GHT AV+++ FSP L SSS D +IW A ++ I
Sbjct: 41 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFEKTI 83
Score = 59 (25.8 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ HP IA +A + +TI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 55 (24.4 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 229
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 53 (23.7 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQLGD-EVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L E++ QGH + + ST
Sbjct: 264 ANFSVTGGKWIV-SGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 425 SACKSSVEDSEQPIHELD-VLSGHENDVNYVQFS--GCAVASRSA 466
+A S +P + L L+GH V+ V+FS G +AS SA
Sbjct: 21 AAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 178 (67.7 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 42/122 (34%), Positives = 69/122 (56%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GHRDA+ F SG+ + +GS D V +W+M+ GH+ +T + S +
Sbjct: 12 RNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPS 71
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
L+AS+S D +R+W +P SVL R HTG+V ++ FS + LL++SDD + +
Sbjct: 72 AHLLASSSRDKTVRLW-VPSVKGESVLFRAHTGSVRSVCFSADGQS---LLTASDDQSIK 127
Query: 356 IW 357
+W
Sbjct: 128 LW 129
Score = 168 (64.2 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 68/263 (25%), Positives = 103/263 (39%)
Query: 227 STMVQKMQ---NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRG 283
S MV M+ + GH+DAV C F S + + S D+ V++W R
Sbjct: 41 SVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSSRDKTVRLWVPSVKGESVLFRA 100
Query: 284 HEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
H G + + S++ + +AS+D I++W + I LR H V FSP
Sbjct: 101 HTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQL-- 158
Query: 344 QLLSSSDDGTCRIWDARYSQ----------YSPRI-YLPKPPDAITGKXXXXXXX-XXXX 391
++S SDD T ++WDA Q YS + + P T
Sbjct: 159 -MVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRT 217
Query: 392 XXXLQSHQILCCAYNA-----NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSG 446
LQ +Q+ A NA +G +T SSD+ ++ + + L L G
Sbjct: 218 HTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRL---------LYTLHG 268
Query: 447 HENDVNYVQFSGCAVASRSAMSD 469
H+ + V FS SA SD
Sbjct: 269 HQGSASCVSFSRSGDQFASAGSD 291
Score = 98 (39.6 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSA-SSYVLDVHPFNPRIAMSAGYDGR 611
+S D + +++ D + +W+A L+H+ SSYV D HP + IA +A D
Sbjct: 152 FSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYV-DFHPSSTCIA-TASSDNT 209
Query: 612 TIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWDI T ++ Y++ + F P G ++ + + +L+ +G
Sbjct: 210 VRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEG 260
Score = 72 (30.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + +L A D + + + ++G L+++L GH S+ + + A SAG
Sbjct: 231 VNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFA-SAG 289
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 290 SDQQVMVW 297
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 197 (74.4 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 47/137 (34%), Positives = 73/137 (53%)
Query: 225 KPSTMVQKMQNIK-KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRG 283
K S V+ +K L GH AV F +G ++ + S D+L+KIW + G
Sbjct: 53 KSSLSVKPNYTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 112
Query: 284 HEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
H+ I+D+A SS++ L+ S S+D ++VW L G + L+GH+ V F+P+ + I
Sbjct: 113 HKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLI- 171
Query: 344 QLLSSSDDGTCRIWDAR 360
+S S D + RIWD R
Sbjct: 172 --VSGSFDESVRIWDVR 186
Score = 188 (71.2 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 38/127 (29%), Positives = 67/127 (52%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + R +++GSDD+ +K+W + T L + +GH + +
Sbjct: 108 KTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQ 167
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 168 SNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 224
Query: 357 WDARYSQ 363
WD Q
Sbjct: 225 WDTASGQ 231
Score = 171 (65.3 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 37/131 (28%), Positives = 69/131 (52%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+++K L+GH + V+C F+ +++GS D V+IW + T CL + H ++ +
Sbjct: 147 KSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHF 206
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDG 352
+ + +L+ S+S D + R+W G + L V+ + FSP I L+++ D
Sbjct: 207 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDN 263
Query: 353 TCRIWDARYSQ 363
T ++WD YS+
Sbjct: 264 TLKLWD--YSK 272
Score = 121 (47.7 bits), Expect = 0.00094, P = 0.00094
Identities = 27/111 (24%), Positives = 52/111 (46%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD----ITDLAVSSNNTLVASASND 306
F +G++++ + D +K+W CL + GH+ + + +V+ +V S S D
Sbjct: 249 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSED 307
Query: 307 FVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
++ +W L + L+GHT V A P + I + +D T ++W
Sbjct: 308 NMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASA-ALENDKTIKLW 357
Score = 116 (45.9 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 191 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 250
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +A+ D +++W G + GH I + + ++S S+D
Sbjct: 251 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMV 310
Query: 355 RIWD 358
IW+
Sbjct: 311 YIWN 314
Score = 73 (30.8 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + TGH Y + + + +S
Sbjct: 244 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 303
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 304 GSEDNMVYIWNL 315
Score = 64 (27.6 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ + HP IA +A + +TI +W
Sbjct: 299 KWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALENDKTIKLW 357
Score = 57 (25.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 256
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 257 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 314
Score = 50 (22.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQL-GDEVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L EV+ QGH + + T
Sbjct: 291 ANFSVTGGKWIV-SGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCT 334
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 182 (69.1 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 42/126 (33%), Positives = 65/126 (51%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
LRGHR V+ F+ R + +GS DR ++IW+++T C+ + GH G I L S T
Sbjct: 503 LRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGT 562
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
V SA+ D +++VW L G ++ L H V A+A S ++ L+S D +W
Sbjct: 563 QVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALA-SRFDGSL--LVSGGADAVVSVWK 619
Query: 359 ARYSQY 364
+Y
Sbjct: 620 DVTEEY 625
Score = 176 (67.0 bits), Expect = 6.3e-15, Sum P(3) = 6.3e-15
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ IK ++ H V D + + TG + LVK+W + A+ S RGH G I+ L
Sbjct: 94 RRIKSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCF 153
Query: 294 SSN-NTLV-ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+ NT V AS ++D +R+W L ++V GH+ + + F P S LLS S D
Sbjct: 154 GKHQNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSF---LLSGSRD 210
Query: 352 GTCRIWDAR 360
T ++W+ +
Sbjct: 211 KTVQVWNIK 219
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
++ H V + GR + + S D+ +K+W T + RGH + + + +
Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSR 520
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+AS S D IR+W + + L GHTGA+ + + + + Q++S++ DG ++W
Sbjct: 521 QLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGT---QVVSAAADGLVKVW 576
Score = 140 (54.3 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 32/133 (24%), Positives = 62/133 (46%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
+++ +IKK D V + +I RL+ I+ + + + S + HE +
Sbjct: 51 ERLFSIKK--DEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVIT 108
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ + NTL+A+ + +++VW + RGH G ++A+ F + + L S +D
Sbjct: 109 MTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNT-WVLASGAD 167
Query: 351 DGTCRIWDARYSQ 363
D R+WD S+
Sbjct: 168 DSRVRLWDLNSSR 180
Score = 133 (51.9 bits), Expect = 0.00015, P = 0.00015
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V Q ++ L GH A+ I+ G V++ + D LVK+WS+ + C+A+ HE +
Sbjct: 536 VDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVW 595
Query: 290 DLAVSSNNTLVASASNDFVIRVWR 313
LA + +L+ S D V+ VW+
Sbjct: 596 ALASRFDGSLLVSGGADAVVSVWK 619
Score = 106 (42.4 bits), Expect = 6.3e-15, Sum P(3) = 6.3e-15
Identities = 33/128 (25%), Positives = 64/128 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN I S D R + +A D I +W++ G +V L GH + +PF+ ++A +G
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSG 527
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV--LSDDVGQIYLLNTGQGES 664
D RTI +W++ ++ E ++ + GT +V +D + +++ L++G+ +
Sbjct: 528 -D-RTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVA 585
Query: 665 QKDAKYDQ 672
D D+
Sbjct: 586 TLDNHEDR 593
Score = 106 (42.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 27/109 (24%), Positives = 54/109 (49%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVSSNNTLVASASNDFVI 309
FD + + ++T DR++ S ET L S + E D +T LA++S++ + +A ++
Sbjct: 27 FDSNEKILVTALTDRIIGTRS-ETGERLFSIKKDEDDYVTALAITSDSKKLIAAFRSRLL 85
Query: 310 RVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
++ +P G I ++ H V + P + L + +G ++WD
Sbjct: 86 TIYEIPSGRRIKSMKAHETPVITMTIDPTNTL---LATGGAEGLVKVWD 131
Score = 63 (27.2 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW-DIW 618
V++A D + VW+ G V +L H + L F+ + +S G D VW D+
Sbjct: 564 VVSAAADGLVKVWSLSSGECVATLDNHEDRVWAL-ASRFDGSLLVSGGADAVVSVWKDVT 622
Query: 619 E 619
E
Sbjct: 623 E 623
Score = 51 (23.0 bits), Expect = 6.3e-15, Sum P(3) = 6.3e-15
Identities = 18/63 (28%), Positives = 29/63 (46%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQP-IHELDVLSGHENDV 451
L+ H +L + +G TG+ D R+W+ ++ED+ IH V +GH V
Sbjct: 360 LEGHTDIVLTLDSSEDGVWLATGAKDNTVRLWNL---NIEDNVYKCIH---VFTGHTASV 413
Query: 452 NYV 454
V
Sbjct: 414 TAV 416
Score = 51 (23.0 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 17/63 (26%), Positives = 29/63 (46%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSL-TGHSASSYV-LDVHPFNPRIAMSAGYDGRTIVWD 616
F+L+ D + VWN S V ++ HS + ++ P +I +AG + WD
Sbjct: 203 FLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAIGWVNGQP-EEKILYTAGEGNLILAWD 261
Query: 617 IWE 619
W+
Sbjct: 262 -WK 263
Score = 47 (21.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVL 444
+ G+ ++GS D +VW+ K S + H ++ +
Sbjct: 197 FEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFHSVEAI 236
Score = 47 (21.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 554 SLDNRFVLAAIMDCRICVWNA-VDGSL---VHSLTGHSASSYVLDVHPFN----PRIAMS 605
S D ++ D + +WN ++ ++ +H TGH+AS + + P + P S
Sbjct: 373 SEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLAS 432
Query: 606 AGYDGRTI 613
+ D RT+
Sbjct: 433 SSQD-RTL 439
Score = 44 (20.5 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 401 LCCAYNANGTVFVTGSSDTFARVW 424
LC + N V +G+ D+ R+W
Sbjct: 151 LCFGKHQNTWVLASGADDSRVRLW 174
Score = 41 (19.5 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 1434 GDEVIYSRQGHQEFIESTGSQEVGPW 1459
G +V +GH + + + S E G W
Sbjct: 353 GTQVFGVLEGHTDIVLTLDSSEDGVW 378
Score = 41 (19.5 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 569 ICVWNAVDGSLVHSL--TGHSASSYVLDVHPFNPRIAMSAGYD 609
I W+ GS + T HS ++ ++ V PF+ +S D
Sbjct: 257 ILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSD 299
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 189 (71.6 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 44/123 (35%), Positives = 63/123 (51%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GH V F SG ++++ S D ++W + T L GH I +A +
Sbjct: 260 RLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDG 319
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+LV+S ND + R+W L G I VL H + A+A+SP YQL +SS D T +IW
Sbjct: 320 SLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNG---YQLATSSADDTVKIW 376
Query: 358 DAR 360
D R
Sbjct: 377 DLR 379
Score = 124 (48.7 bits), Expect = 8.5e-08, Sum P(2) = 8.5e-08
Identities = 37/137 (27%), Positives = 59/137 (43%)
Query: 233 MQNIKKLRGHRDAV-----Y--CAIFDRSGR--FVITGSDDRLVKIWSMETAFCLASCRG 283
+ ++ RGH D V Y C +D + TG+ D V +W + L G
Sbjct: 204 LSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEG 263
Query: 284 HEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
H + +A + + SAS D R+W + G+ + + GH+ + +IA P S +
Sbjct: 264 HLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVS 323
Query: 344 QLLSSSDDGTCRIWDAR 360
S +D RIWD R
Sbjct: 324 ---SGGNDAIGRIWDLR 337
Score = 114 (45.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+QK + + G + F +G +GS VK+W+ + + RGH ++
Sbjct: 159 LQKAELMGSQIGGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVS 218
Query: 290 DLA---------VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPS 340
L S +A+ + D + +W+ P+ L GH V +AF PS
Sbjct: 219 GLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAF--HPS 276
Query: 341 AIYQLLSSSDDGTCRIWD 358
Y L+S+S D T R+WD
Sbjct: 277 GDY-LVSASFDTTWRLWD 293
Score = 87 (35.7 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
NRF+ + D + +WN ++ SL+ S+ GH V+ V + R +S+GYD RTI +W
Sbjct: 405 NRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEK--VMSVDGYGDRF-ISSGYD-RTIKLW 460
Score = 71 (30.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 551 IVWSLDNRFVLA-AIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP---RIAMSA 606
+ WS N + LA + D + +W+ SL H++ HS S V DV R ++
Sbjct: 355 MAWS-PNGYQLATSSADDTVKIWDLRKVSLAHTIPAHS--SLVSDVRYIESGVNRFIATS 411
Query: 607 GYDGRTIVWD 616
GYDG +W+
Sbjct: 412 GYDGCVKLWN 421
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 201 (75.8 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 48/129 (37%), Positives = 69/129 (53%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHRD V IF + + + SDD VKIW T + GH + + S ++
Sbjct: 417 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSR 476
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+ASAS+D +R+W G L GH+ VT+++FS S + L S+S+D T RIWD
Sbjct: 477 LLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFS-HDSRL--LASASNDQTVRIWD 533
Query: 359 --ARYSQYS 365
AR Q++
Sbjct: 534 IEARSLQHT 542
Score = 187 (70.9 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 44/120 (36%), Positives = 61/120 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHRD V IF + + + SDD VKIW T + GH + + S ++
Sbjct: 375 LEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 434
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+ASAS+D +++W G L GH V ++ FS S + L S+SDD T RIWD
Sbjct: 435 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSRL--LASASDDRTVRIWD 491
Score = 181 (68.8 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 43/123 (34%), Positives = 62/123 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH AV + R + + SDDR VKIW ET + GH + + S
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSH 348
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ASAS D +++W G L GH V ++ FS S + L S+SDD T +
Sbjct: 349 DSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSQL--LASASDDSTVK 404
Query: 356 IWD 358
IWD
Sbjct: 405 IWD 407
Score = 172 (65.6 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 42/120 (35%), Positives = 59/120 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH D V IF R + + SD VKIW T + GH + + S ++
Sbjct: 334 LEGHSDLVRSVIFSHDSRLLASASDST-VKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQ 392
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+ASAS+D +++W G L GH V ++ FS S + L S+SDD T +IWD
Sbjct: 393 LLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFS-HDSQL--LASASDDSTVKIWD 449
Score = 134 (52.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 29/82 (35%), Positives = 47/82 (57%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
CL + GHE + ++ S ++ L+ASAS+D +++W G L GH+ V ++ FS
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 337 PRPSAIYQLLSSSDDGTCRIWD 358
S +LL+S+ D T +IWD
Sbjct: 348 -HDS---RLLASASDSTVKIWD 365
Score = 98 (39.6 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV-HPFNPRIAMSA 606
V +++S D++ + +A D + +W+ GSL H+L GH +V V + R+ SA
Sbjct: 424 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR--DWVRSVIFSHDSRLLASA 481
Query: 607 GYDGRTI-VWDIWEGTPIRIYEIGRFKLVDG-KFSPD 641
D RT+ +WD +G+ E G LV FS D
Sbjct: 482 S-DDRTVRIWDTEKGSHKHTLE-GHSSLVTSVSFSHD 516
Score = 94 (38.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVH-PFNPRIAMSA 606
V +++S D+R + +A D + +W+ GS H+L GHS S V V + R+ SA
Sbjct: 466 VRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHS--SLVTSVSFSHDSRLLASA 523
Query: 607 GYDGRTIVWDI 617
D +WDI
Sbjct: 524 SNDQTVRIWDI 534
Score = 93 (37.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 29/116 (25%), Positives = 53/116 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV-HPFNPRIAMSA 606
V +++S D++ + +A D + +W+ GSL H+L GH +V V + ++ SA
Sbjct: 382 VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR--DWVRSVIFSHDSQLLASA 439
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
D +WD G+ E R + FS D + + D + + +T +G
Sbjct: 440 SDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKG 495
Score = 44 (20.5 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHS 582
V + +S D+R + +A D + +W+ SL H+
Sbjct: 508 VTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHT 542
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 171 (65.3 bits), Expect = 9.3e-15, Sum P(3) = 9.3e-15
Identities = 48/162 (29%), Positives = 73/162 (45%)
Query: 205 GGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLR----GHRDAVYCAIFD-RSGRFVI 259
G + H +A V K+Q + +L GH + + CA F S +
Sbjct: 110 GALLRQHGIEDAFETTLTLAAEPQAVFKVQAVSRLAHRIPGHGEPILCAQFSPASSARLA 169
Query: 260 TGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLP 319
TGS D +IW ET + +GH G + ++ S + T +A+ S D +R+W G
Sbjct: 170 TGSGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQ 229
Query: 320 I-SVLRGHTGAVTAIAFSPRP---SAIYQLLSSSDDGTCRIW 357
+ S L+GH V IA+ P +L+S+S D T RIW
Sbjct: 230 VGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASKDFTARIW 271
Score = 129 (50.5 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 37/128 (28%), Positives = 59/128 (46%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLAS-CRGHEGDITDLAVS--- 294
L+GH V + G + T S D+ V+IW ET + S +GH + +A
Sbjct: 191 LKGHAGWVLGVSWSPDGTRLATCSMDKTVRIWDPETGKQVGSELKGHAKWVQGIAWEPLH 250
Query: 295 ---SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+ SAS DF R+W + G VL GH G+V+ + + + + ++S D
Sbjct: 251 LWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAG-NGTGVVYTASHD 309
Query: 352 GTCRIWDA 359
T ++WDA
Sbjct: 310 KTVKVWDA 317
Score = 128 (50.1 bits), Expect = 0.00030, P = 0.00030
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I ++ GH+ V F G + + D K+W+ + + RGH + + S+
Sbjct: 406 IARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSA 465
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ +AS D ++VW + G + L GH V + +SP + S D R
Sbjct: 466 DSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVG---SGGRDKAVR 522
Query: 356 IW 357
+W
Sbjct: 523 LW 524
Score = 124 (48.7 bits), Expect = 0.00082, P = 0.00082
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I LRGH VY F R ++T S D +K+W++ T GHE ++ + S
Sbjct: 448 INTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSP 507
Query: 296 NNTLVASASNDFVIRVWR 313
+ V S D +R+WR
Sbjct: 508 DGQRVGSGGRDKAVRLWR 525
Score = 94 (38.1 bits), Expect = 9.3e-15, Sum P(3) = 9.3e-15
Identities = 29/99 (29%), Positives = 46/99 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + +S D + +A D +WNA DG +++L GH A Y + R+ ++A
Sbjct: 416 VNHVTFSPDGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSA-DSRLLVTAS 474
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSI 645
D VW++ G + G V G +SPDG +
Sbjct: 475 KDTTLKVWNVRTGK-LATDLPGHEDEVYGVDWSPDGQRV 512
Score = 89 (36.4 bits), Expect = 3.0e-14, Sum P(3) = 3.0e-14
Identities = 21/63 (33%), Positives = 29/63 (46%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D+R ++ A D + VWN G L L GH Y +D P R+ S G D
Sbjct: 463 FSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVG-SGGRDKAV 521
Query: 613 IVW 615
+W
Sbjct: 522 RLW 524
Score = 85 (35.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 21/81 (25%), Positives = 40/81 (49%)
Query: 258 VITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT--LVASASNDFVIRVWRLP 315
+++ S D +IW++ T GH+G ++ + + N +V +AS+D ++VW
Sbjct: 259 LVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAV 318
Query: 316 DGLPISVLRGHTGAVTAIAFS 336
G + L+ H V +A S
Sbjct: 319 KGTLLHDLKSHAHWVNHLALS 339
Score = 65 (27.9 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 548 VNMIVWSLDNR--FVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V+ + W N V A D + VW+AV G+L+H L H+
Sbjct: 289 VSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTLLHDLKSHA 330
Score = 64 (27.6 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDV 443
C+++A+ + VT S DT +VW+ + ++ P HE +V
Sbjct: 461 CSFSADSRLLVTASKDTTLKVWNVRTGKLA-TDLPGHEDEV 500
Score = 62 (26.9 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 18/71 (25%), Positives = 29/71 (40%)
Query: 552 VWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR-IAMSAGYDG 610
+W +++A D +W G H L+GH S + N + +A +D
Sbjct: 251 LWRDGTPRLVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDK 310
Query: 611 RTIVWDIWEGT 621
VWD +GT
Sbjct: 311 TVKVWDAVKGT 321
Score = 61 (26.5 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 576 DGSL-VHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLV 634
DG+ + + GH + P IA SAG+D T +W+ +G I +
Sbjct: 401 DGTKPIARMIGHQKQVNHVTFSPDGSMIA-SAGWDNATKLWNARDGKFINTLRGHVAPVY 459
Query: 635 DGKFSPDGTSIVLS--DDVGQIYLLNTGQGESQKDAKYDQFFLGDYRP 680
FS D +V + D +++ + TG+ + D+ + D+ P
Sbjct: 460 QCSFSADSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSP 507
Score = 59 (25.8 bits), Expect = 9.3e-15, Sum P(3) = 9.3e-15
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 395 LQSHQ--ILCCAYNA-NGT-VFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEND 450
L H+ + C + A NGT V T S D +VW A K ++ +H+L H +
Sbjct: 282 LSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVWDAVKGTL------LHDL---KSHAHW 332
Query: 451 VNYVQFS 457
VN++ S
Sbjct: 333 VNHLALS 339
Score = 48 (22.0 bits), Expect = 1.2e-12, Sum P(4) = 1.2e-12
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 408 NGTV-FVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
+GT V+ S D AR+W+ E H VLSGH+ V+ V++
Sbjct: 254 DGTPRLVSASKDFTARIWTVNTGRTE------H---VLSGHKGSVSCVRW 294
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 193 (73.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/150 (32%), Positives = 80/150 (53%)
Query: 212 RAPSVCSACYAIAKPSTMVQKMQNIK-KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIW 270
RA S+ +KP T V+ +K L GH AV F +G ++ + S D+L+KIW
Sbjct: 14 RAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
Query: 271 SMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAV 330
+ GH+ I+D+A SS++ L+ SAS+D +++W + G + L+GH+ V
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 331 TAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
F+P+ + I +S S D + RIWD +
Sbjct: 133 FCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 170 (64.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH + V+C F+ +++GS D V+IW ++T CL + H ++ + +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ S+S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 236 IKKLRGHRDAVYCAIFDRS---GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH++ YC + S G+++++GS+D LV IW+++T + +GH + A
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 308
Query: 293 VSSNNTLVASAS--NDFVIRVWR 313
++ASA+ ND I++W+
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 118 (46.6 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ + WS D+ +++A D + +W+ G + +L GHS +YV + FNP+ + +S
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN-FNPQSNLIVS 146
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G ++ + F+ DG+ IV S G + +T G+
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 666 K 666
K
Sbjct: 207 K 207
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +A+ D +++W G + GH I + + ++S S+D
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 355 RIWD 358
IW+
Sbjct: 284 YIWN 287
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN-DVNYV- 454
S+ + CC +N + V+GS D R+W K+ P H V + H N D + +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 455 --QFSG-CAV---ASRSAMSDAFKEENVP 477
+ G C + AS + ++N P
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 72 (30.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 68 (29.0 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRI 368
L GHT AV+++ FSP L SSS D +IW A ++ I
Sbjct: 41 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFEKTI 83
Score = 59 (25.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ HP IA +A + +TI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 55 (24.4 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 229
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 53 (23.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQLGD-EVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L E++ QGH + + ST
Sbjct: 264 ANFSVTGGKWIV-SGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 425 SACKSSVEDSEQPIHELD-VLSGHENDVNYVQFS--GCAVASRSA 466
S+ S +P + L L+GH V+ V+FS G +AS SA
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 193 (73.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/150 (32%), Positives = 80/150 (53%)
Query: 212 RAPSVCSACYAIAKPSTMVQKMQNIK-KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIW 270
RA S+ +KP T V+ +K L GH AV F +G ++ + S D+L+KIW
Sbjct: 14 RAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
Query: 271 SMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAV 330
+ GH+ I+D+A SS++ L+ SAS+D +++W + G + L+GH+ V
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 331 TAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
F+P+ + I +S S D + RIWD +
Sbjct: 133 FCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 170 (64.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH + V+C F+ +++GS D V+IW ++T CL + H ++ + +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ S+S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 236 IKKLRGHRDAVYCAIFDRS---GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH++ YC + S G+++++GS+D LV IW+++T + +GH + A
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 308
Query: 293 VSSNNTLVASAS--NDFVIRVWR 313
++ASA+ ND I++W+
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 118 (46.6 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ + WS D+ +++A D + +W+ G + +L GHS +YV + FNP+ + +S
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN-FNPQSNLIVS 146
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G ++ + F+ DG+ IV S G + +T G+
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 666 K 666
K
Sbjct: 207 K 207
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +A+ D +++W G + GH I + + ++S S+D
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 355 RIWD 358
IW+
Sbjct: 284 YIWN 287
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN-DVNYV- 454
S+ + CC +N + V+GS D R+W K+ P H V + H N D + +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 455 --QFSG-CAV---ASRSAMSDAFKEENVP 477
+ G C + AS + ++N P
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 72 (30.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 68 (29.0 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRI 368
L GHT AV+++ FSP L SSS D +IW A ++ I
Sbjct: 41 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFEKTI 83
Score = 59 (25.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ HP IA +A + +TI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 55 (24.4 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 229
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 53 (23.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQLGD-EVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L E++ QGH + + ST
Sbjct: 264 ANFSVTGGKWIV-SGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 425 SACKSSVEDSEQPIHELD-VLSGHENDVNYVQFS--GCAVASRSA 466
S+ S +P + L L+GH V+ V+FS G +AS SA
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 193 (73.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/150 (32%), Positives = 80/150 (53%)
Query: 212 RAPSVCSACYAIAKPSTMVQKMQNIK-KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIW 270
RA S+ +KP T V+ +K L GH AV F +G ++ + S D+L+KIW
Sbjct: 14 RAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
Query: 271 SMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAV 330
+ GH+ I+D+A SS++ L+ SAS+D +++W + G + L+GH+ V
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 331 TAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
F+P+ + I +S S D + RIWD +
Sbjct: 133 FCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 170 (64.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH + V+C F+ +++GS D V+IW ++T CL + H ++ + +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ S+S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 236 IKKLRGHRDAVYCAIFDRS---GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH++ YC + S G+++++GS+D LV IW+++T + +GH + A
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 308
Query: 293 VSSNNTLVASAS--NDFVIRVWR 313
++ASA+ ND I++W+
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 118 (46.6 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ + WS D+ +++A D + +W+ G + +L GHS +YV + FNP+ + +S
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN-FNPQSNLIVS 146
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G ++ + F+ DG+ IV S G + +T G+
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 666 K 666
K
Sbjct: 207 K 207
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +A+ D +++W G + GH I + + ++S S+D
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 355 RIWD 358
IW+
Sbjct: 284 YIWN 287
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN-DVNYV- 454
S+ + CC +N + V+GS D R+W K+ P H V + H N D + +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 455 --QFSG-CAV---ASRSAMSDAFKEENVP 477
+ G C + AS + ++N P
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 72 (30.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 68 (29.0 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRI 368
L GHT AV+++ FSP L SSS D +IW A ++ I
Sbjct: 41 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFEKTI 83
Score = 59 (25.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ HP IA +A + +TI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 55 (24.4 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 229
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 53 (23.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQLGD-EVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L E++ QGH + + ST
Sbjct: 264 ANFSVTGGKWIV-SGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 425 SACKSSVEDSEQPIHELD-VLSGHENDVNYVQFS--GCAVASRSA 466
S+ S +P + L L+GH V+ V+FS G +AS SA
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 193 (73.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 49/150 (32%), Positives = 80/150 (53%)
Query: 212 RAPSVCSACYAIAKPSTMVQKMQNIK-KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIW 270
RA S+ +KP T V+ +K L GH AV F +G ++ + S D+L+KIW
Sbjct: 14 RAQPTPSSSATQSKP-TPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 72
Query: 271 SMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAV 330
+ GH+ I+D+A SS++ L+ SAS+D +++W + G + L+GH+ V
Sbjct: 73 GAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 331 TAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
F+P+ + I +S S D + RIWD +
Sbjct: 133 FCCNFNPQSNLI---VSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 170 (64.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH + V+C F+ +++GS D V+IW ++T CL + H ++ + +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ S+S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 236 IKKLRGHRDAVYCAIFDRS---GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH++ YC + S G+++++GS+D LV IW+++T + +GH + A
Sbjct: 249 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 308
Query: 293 VSSNNTLVASAS--NDFVIRVWR 313
++ASA+ ND I++W+
Sbjct: 309 CHPTENIIASAALENDKTIKLWK 331
Score = 118 (46.6 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ + WS D+ +++A D + +W+ G + +L GHS +YV + FNP+ + +S
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN-FNPQSNLIVS 146
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G ++ + F+ DG+ IV S G + +T G+
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 666 K 666
K
Sbjct: 207 K 207
Score = 116 (45.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 164 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 223
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +A+ D +++W G + GH I + + ++S S+D
Sbjct: 224 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 283
Query: 355 RIWD 358
IW+
Sbjct: 284 YIWN 287
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN-DVNYV- 454
S+ + CC +N + V+GS D R+W K+ P H V + H N D + +
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 455 --QFSG-CAV---ASRSAMSDAFKEENVP 477
+ G C + AS + ++N P
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPP 216
Score = 72 (30.4 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + TGH Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 276
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 68 (29.0 bits), Expect = 9.2e-07, Sum P(3) = 9.2e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRI 368
L GHT AV+++ FSP L SSS D +IW A ++ I
Sbjct: 41 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFEKTI 83
Score = 59 (25.8 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ HP IA +A + +TI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 55 (24.4 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 229
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 53 (23.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQLGD-EVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L E++ QGH + + ST
Sbjct: 264 ANFSVTGGKWIV-SGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 307
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(3) = 0.00067
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 425 SACKSSVEDSEQPIHELD-VLSGHENDVNYVQFS--GCAVASRSA 466
S+ S +P + L L+GH V+ V+FS G +AS SA
Sbjct: 21 SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 179 (68.1 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DL 291
+ + +++ H D V C F RF+ T S D+ VKIW+ T + S H +
Sbjct: 384 EKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHF 443
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+SN+ L+A+ S+D+ +++W L + + GHT +V+ FSP L S S D
Sbjct: 444 TNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKL---LASCSAD 500
Query: 352 GTCRIWDAR 360
GT ++WD +
Sbjct: 501 GTLKLWDVK 509
Score = 137 (53.3 bits), Expect = 4.2e-10, Sum P(3) = 4.2e-10
Identities = 32/130 (24%), Positives = 64/130 (49%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ ++N+ +L R H DAVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 337 KNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV 396
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A S+++ +A+ S D +++W G + H+ V F+ + + L +
Sbjct: 397 LCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLL-LATG 455
Query: 349 SDDGTCRIWD 358
S D ++WD
Sbjct: 456 SSDYFLKLWD 465
Score = 112 (44.5 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H++ V F G+ VI+ SDD +++W+ ++ + S + H+ + D + N+ L+
Sbjct: 747 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFRLLKNSRLL- 804
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H V + SP + + S+S D T +IW
Sbjct: 805 SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDAT---KFSSTSADKTAKIW 857
Score = 88 (36.0 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHS-----LTGHSAS--SYVLDVHPFNP 600
V +S+D+ + + I +WN +G L+HS + G +A+ +V D+ F+P
Sbjct: 875 VRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLR-FSP 933
Query: 601 --RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
++ +SAG G W++ G I+ + L SPD + V D++G +Y+L
Sbjct: 934 DGKMLVSAG--GYLKWWNVDSGKSIQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYVL 990
Score = 85 (35.0 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L N +L+ D + VWN + G + H + D+ P + + S D +
Sbjct: 798 LKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKI 856
Query: 615 WDIWEGTPIRIYEIGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W +P+ +E+ K + FS D T + DD G+I + N GE
Sbjct: 857 WSFDLLSPL--HELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGE 905
Score = 73 (30.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-NPRIAMSA 606
V I ++ D + V+++ D I VWN V SL H + V D N R+ +S
Sbjct: 751 VRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQET--VKDFRLLKNSRL-LSW 806
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
+DG VW+I G + + + ++ SPD T S +D +I+
Sbjct: 807 SFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 857
Score = 66 (28.3 bits), Expect = 1.6e-14, Sum P(3) = 1.6e-14
Identities = 21/62 (33%), Positives = 30/62 (48%)
Query: 398 HQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
HQ +L C + + T F + S+D A++WS D P+HEL GH+ V
Sbjct: 829 HQDTVLSCDISPDATKFSSTSADKTAKIWSF------DLLSPLHEL---RGHKGCVRCSA 879
Query: 456 FS 457
FS
Sbjct: 880 FS 881
Score = 59 (25.8 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 15/65 (23%), Positives = 30/65 (46%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H+ + C A++ + T+ TG + R+W+ + S P+ + H V
Sbjct: 868 LRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVT 927
Query: 453 YVQFS 457
++FS
Sbjct: 928 DLRFS 932
Score = 47 (21.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 637 KFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDS 685
+F+ DG +++ S D I + N Q E + Q + D+R L+++S
Sbjct: 755 QFTTDGKNVISSSDDSAIQVWNW-QSEETVSLQAHQETVKDFR-LLKNS 801
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 165 (63.1 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L H + V CA F GR +++ SDD+ VK+W + C+ S H G +T + + T
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+A D ++VW + + H+ AV A++F PS Y L+++S D T +I D
Sbjct: 201 CIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSF--HPSGNY-LITASSDSTLKILD 257
Score = 163 (62.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GHRDAV C F + + + +GS D + IW M+ GH+ +T + S +
Sbjct: 13 RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 297 NTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
L+AS S D +R+W +P+ S V R HT V ++ F S L+++SDD T +
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SDGQLLVTASDDKTVK 128
Query: 356 IWDARYSQY 364
+W ++
Sbjct: 129 VWSTHRQRF 137
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 52/210 (24%), Positives = 80/210 (38%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
R H V F G+ ++T SDD+ VK+WS L S H + S + L
Sbjct: 100 RAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRL 159
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+ SAS+D +++W + H G VT + F P + I ++ D T ++WD
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCI---AAAGMDNTVKVWDT 216
Query: 360 R-------YSQYSPRI----YLPKPPDAITGKXXXXXXXXXXXXX----XLQSHQ--ILC 402
R Y +S + + P IT L HQ
Sbjct: 217 RTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVE 432
A++ G F +G SD VW + +V+
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVWKSNFDTVD 306
Score = 103 (41.3 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++A D + +W+ VHS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWD ++ Y++ + F P G ++ + + +L+ +G
Sbjct: 212 KVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Score = 61 (26.5 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + +++ A D + + + ++G L+++L GH + + A S G
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 45 (20.9 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 11/15 (73%), Positives = 11/15 (73%)
Query: 637 KFSPDGTSIV-LSDD 650
KFSPDG IV SDD
Sbjct: 152 KFSPDGRLIVSASDD 166
Score = 37 (18.1 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 7/49 (14%), Positives = 22/49 (44%)
Query: 1416 SWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSING 1464
++L+ + + + + + ++Y+ GHQ + G +++ G
Sbjct: 242 NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 203 (76.5 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 234 QNIKKLRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ + L GHR+ VY F+ G V TGS D+ K+WS ET C + RGH +I LA
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLA 184
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ +TLVA+ S D ++W + G +S L GH + ++ F+ +L++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGD---RLVTGSFDH 241
Query: 353 TCRIWD 358
T +WD
Sbjct: 242 TAILWD 247
Score = 191 (72.3 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 41/124 (33%), Positives = 66/124 (53%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q + L GH D V F+ +G+ + T S D +++S +T CL GH+G+I+ +
Sbjct: 294 QCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCF 353
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
++ + V +AS D RVW + G + VL GH+ + + AF+ I ++ S D T
Sbjct: 354 NAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTI---ITGSKDNT 410
Query: 354 CRIW 357
CRIW
Sbjct: 411 CRIW 414
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 57/229 (24%), Positives = 95/229 (41%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
RGH + C F+ V TGS D K+W +E+ +++ GH +I L ++
Sbjct: 174 RGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDR 233
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+ + S D +W +P G + VL GH G ++ + F+ S I ++S D +C++WDA
Sbjct: 234 LVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLI---ATASLDKSCKVWDA 290
Query: 360 RYSQYSPRI--YLPKPPDAI---TGKXXXXXXXXXXXXX-XLQSHQILC----------- 402
Q + + + D TG+ + Q LC
Sbjct: 291 EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISK 350
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
+NA G+ +T S D +RVW + L VL GH +++
Sbjct: 351 VCFNAQGSRVLTASVDKTSRVWCVKTGAC---------LQVLEGHSDEI 390
Score = 170 (64.9 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + L GHR + C F+ + T S D+ K+W E CLA+ GH ++ D+
Sbjct: 252 RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCF 311
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+ L+A+AS D RV+ + L GH G ++ + F+ + S + L++S D T
Sbjct: 312 NYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRV---LTASVDKT 368
Query: 354 CRIW 357
R+W
Sbjct: 369 SRVW 372
Score = 138 (53.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 51/215 (23%), Positives = 91/215 (42%)
Query: 276 FCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAF 335
+ + + H +T++A + + + + S D ++W G + L GH V AIAF
Sbjct: 83 YLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAF 142
Query: 336 SPRPSAIYQLLSSSDDGTCRIWDARYSQ--YSPR---------IYLPKPPDAITGKXXXX 384
+ P ++ + S D TC++W A + Y+ R + P+ TG
Sbjct: 143 N-NPYGD-KVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTT 200
Query: 385 XXX----XXXXXXXLQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPI 438
L H +I+ +N G VTGS D A +W S + +
Sbjct: 201 AKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDV------PSGRKV 254
Query: 439 HELDVLSGHENDVNYVQFS-GCAVASRSAMSDAFK 472
H VLSGH +++ VQF+ C++ + +++ + K
Sbjct: 255 H---VLSGHRGEISCVQFNWDCSLIATASLDKSCK 286
Score = 65 (27.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 26/130 (20%), Positives = 58/130 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV-HPFNPRIAMSA 606
++ + ++ D + A +D VW+A G + +L GH+ VLDV + ++ +A
Sbjct: 264 ISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE--VLDVCFNYTGQLIATA 321
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLS--DDVGQIYLLNTGQGES 664
DG + V+ + E + ++ F+ G+ ++ + D +++ + TG
Sbjct: 322 SADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQ 381
Query: 665 QKDAKYDQFF 674
+ D+ F
Sbjct: 382 VLEGHSDEIF 391
Score = 59 (25.8 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 33/122 (27%), Positives = 50/122 (40%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
+R V + D +W+ G VH L+GH + + ++ + +A D VWD
Sbjct: 232 DRLVTGSF-DHTAILWDVPSGRKVHVLSGHRGEISCVQFN-WDCSLIATASLDKSCKVWD 289
Query: 617 IWEGTPIRIYEIGRF-KLVDGKF----------SPDGTSIVLSDDVGQ-IYLLNTGQGES 664
EG +G +++D F S DGTS V S D Q + L +GE
Sbjct: 290 A-EGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEI 348
Query: 665 QK 666
K
Sbjct: 349 SK 350
Score = 47 (21.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 28/119 (23%), Positives = 53/119 (44%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS- 457
++L +N G + T S+D +RV+S D+ Q + +L+ GH+ +++ V F+
Sbjct: 305 EVLDVCFNYTGQLIATASADGTSRVFST------DTFQCLCQLE---GHKGEISKVCFNA 355
Query: 458 -GCAVASRS-------------AMSDAFKEENVPKFKNSW-FCHDNIVTCSRDGSAIIW 501
G V + S A + + F ++ + D I+T S+D + IW
Sbjct: 356 QGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
Score = 41 (19.5 bits), Expect = 6.8e-12, Sum P(2) = 6.8e-12
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 583 LTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
L GH + + R+ ++A D + VW + G +++ E ++ F+ +G
Sbjct: 341 LEGHKGEISKVCFNAQGSRV-LTASVDKTSRVWCVKTGACLQVLEGHSDEIFSCAFNYEG 399
Query: 643 TSIV 646
+I+
Sbjct: 400 DTII 403
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 177 (67.4 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 41/129 (31%), Positives = 63/129 (48%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H V C+ F GR ++T SDD V +W ++ L GH G + S + L+A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARY 361
S+S+D IR+W + + VL+GH +V ++FSP QL S D +W+
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSK---QLASGGWDKRAIVWEV-- 139
Query: 362 SQYSPRIYL 370
Q R++L
Sbjct: 140 -QSGRRVHL 147
Score = 169 (64.5 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 37/125 (29%), Positives = 61/125 (48%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GHR V F GR + + S D +++W + + CL +GH+ + ++ S ++
Sbjct: 63 RLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDS 122
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+AS D VW + G + +L GH ++ + FSP + L + S D T IW
Sbjct: 123 KQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDS---LATGSWDSTVHIW 179
Query: 358 DARYS 362
D R S
Sbjct: 180 DLRAS 184
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 32/131 (24%), Positives = 59/131 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V + + + L+GH+ +V F + + +G D+ +W +++ + GH I
Sbjct: 97 VARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQ 156
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISV---LRGHTGAVTAIAFSPRPSAIYQLL 346
S + +A+ S D + +W L P+ L GHTG ++ + +S S + L
Sbjct: 157 SSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA--SGL--LA 212
Query: 347 SSSDDGTCRIW 357
S S D T +W
Sbjct: 213 SGSWDKTICVW 223
Score = 97 (39.2 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D++ + + D R VW G VH L GH S D P + +A +
Sbjct: 113 VETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLA-TGS 171
Query: 608 YDGRTIVWDIWEGTPIRIY 626
+D +WD+ TP+ Y
Sbjct: 172 WDSTVHIWDLRASTPVVSY 190
Score = 84 (34.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 28/83 (33%), Positives = 38/83 (45%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
D ICVW +L L GH+ L P ++A SAGY RT+ VWD G +
Sbjct: 217 DKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLA-SAGYS-RTVKVWDCLTGKCLE 274
Query: 625 IYEIGRFKLVDGK-FSPDGTSIV 646
+ G + F+PDG +V
Sbjct: 275 TLK-GMLDVAHACIFTPDGKLLV 296
Score = 70 (29.7 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L H+ + C ++ +G + + SSD R+W +S L VL GH+ V
Sbjct: 64 LAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKC---------LHVLKGHQRSVE 114
Query: 453 YVQFS 457
V FS
Sbjct: 115 TVSFS 119
Score = 42 (19.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTG 585
VN + +S D + +A + VW+ + G + +L G
Sbjct: 241 VNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKG 278
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 187 (70.9 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 41/122 (33%), Positives = 68/122 (55%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH AV F +G ++ + S D+L+KIW + GH+ I+D+A SS++
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN 74
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+ SAS+D +++W + G + L+GH+ V F+P+ + I +S S D + RIWD
Sbjct: 75 LLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI---VSGSFDESVRIWD 131
Query: 359 AR 360
+
Sbjct: 132 VK 133
Score = 184 (69.8 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 114
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 115 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 171
Query: 357 WDARYSQ 363
WD Q
Sbjct: 172 WDTASGQ 178
Score = 170 (64.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH + V+C F+ +++GS D V+IW ++T CL + H ++ + +
Sbjct: 96 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 155
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ S+S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 156 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTL 212
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 213 KLWD--YSK 219
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 25/83 (30%), Positives = 47/83 (56%)
Query: 236 IKKLRGHRDAVYCAIFDRS---GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH++ YC + S G+++++GS+D LV IW+++T + +GH + A
Sbjct: 223 LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTA 282
Query: 293 VSSNNTLVASAS--NDFVIRVWR 313
++ASA+ ND I++W+
Sbjct: 283 CHPTENIIASAALENDKTIKLWK 305
Score = 120 (47.3 bits), Expect = 0.00089, P = 0.00089
Identities = 27/111 (24%), Positives = 53/111 (47%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD----ITDLAVSSNNTLVASASND 306
F +G++++ + D +K+W CL + GH+ + + +V+ +V S S D
Sbjct: 196 FSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIV-SGSED 254
Query: 307 FVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
++ +W L + L+GHT V + A P + I + +D T ++W
Sbjct: 255 NLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASA-ALENDKTIKLW 304
Score = 118 (46.6 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ + WS D+ +++A D + +W+ G + +L GHS +YV + FNP+ + +S
Sbjct: 64 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN-FNPQSNLIVS 120
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G ++ + F+ DG+ IV S G + +T G+
Sbjct: 121 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 180
Query: 666 K 666
K
Sbjct: 181 K 181
Score = 116 (45.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/124 (23%), Positives = 54/124 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD-ITDLAVS 294
+K L H D V F+R G +++ S D L +IW + CL + + ++ + S
Sbjct: 138 LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 197
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + +A+ D +++W G + GH I + + ++S S+D
Sbjct: 198 PNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLV 257
Query: 355 RIWD 358
IW+
Sbjct: 258 YIWN 261
Score = 73 (30.8 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 23/89 (25%), Positives = 38/89 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN-DVNYV- 454
S+ + CC +N + V+GS D R+W K+ P H V + H N D + +
Sbjct: 103 SNYVFCCNFNPQSNLIVSGSFDESVRIWDV-KTGKCLKTLPAHSDPVSAVHFNRDGSLIV 161
Query: 455 --QFSG-CAV---ASRSAMSDAFKEENVP 477
+ G C + AS + ++N P
Sbjct: 162 SSSYDGLCRIWDTASGQCLKTLIDDDNPP 190
Score = 72 (30.4 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + TGH Y + + + +S
Sbjct: 191 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 250
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 251 GSEDNLVYIWNL 262
Score = 68 (29.0 bits), Expect = 5.8e-07, Sum P(3) = 5.8e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRI 368
L GHT AV+++ FSP L SSS D +IW A ++ I
Sbjct: 15 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFEKTI 57
Score = 59 (25.8 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ HP IA +A + +TI +W
Sbjct: 246 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 304
Score = 55 (24.4 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 148 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 203
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 204 LAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
Score = 53 (23.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQLGD-EVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L E++ QGH + + ST
Sbjct: 238 ANFSVTGGKWIV-SGSEDNLVYIWNLQTKEIVQKLQGHTDVVIST 281
Score = 38 (18.4 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 444 LSGHENDVNYVQFS--GCAVASRSA 466
L+GH V+ V+FS G +AS SA
Sbjct: 15 LAGHTKAVSSVKFSPNGEWLASSSA 39
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 172 (65.6 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +AV F +G+++ +GS D V+ W + T +C+GH + ++ S +
Sbjct: 61 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 120
Query: 299 LVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+AS + I +W G + VL GH+ +T +++ P P Y + SSS DG+
Sbjct: 121 TLASGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRY-MASSSKDGSV 179
Query: 355 RIWD 358
R+WD
Sbjct: 180 RVWD 183
Score = 154 (59.3 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ ++ GH+ + +F R + + S D+ +K+W T LAS RGH + +A S+
Sbjct: 316 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 375
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S S+D ++VW + + L GH V A+ +SP + S D R
Sbjct: 376 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRV---ASGGKDKCLR 432
Query: 356 IW 357
IW
Sbjct: 433 IW 434
Score = 112 (44.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
R++ + S D V++W C GH +T L + L+ SAS D I+VWR
Sbjct: 168 RYMASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH 226
Query: 316 DGLPISVLRGHTGAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 227 DGVLCRTLQGHGHWVNTMALS 247
Score = 102 (41.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 25/82 (30%), Positives = 36/82 (43%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C +S GH + +A S +AS S D +R W L P +GH V +I++S
Sbjct: 57 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 116
Query: 337 PRPSAIYQLLSSSDDGTCRIWD 358
P L S +G +WD
Sbjct: 117 PDGKT---LASGCKNGQILLWD 135
Score = 97 (39.2 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N +++S D+R + +A D I +W+ G + SL GH A+ Y + + R+ +S
Sbjct: 326 INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 384
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 385 SDSTLKVWDV 394
Score = 96 (38.9 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I WS D+R +++ D + VW+ L L GH+ Y +D P R+A S G
Sbjct: 368 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVA-SGG 426
Query: 608 YDGRTIVW 615
D +W
Sbjct: 427 KDKCLRIW 434
Score = 59 (25.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
V + W D + +A D I VW A DG L +L GH
Sbjct: 200 VTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 237
Score = 58 (25.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R++ ++ D + VW+ G LTGH+ S V + + SA D RTI VW
Sbjct: 168 RYMASSSKDGSVRVWDTTAGRCERILTGHTQS--VTCLRWGGDGLLYSASQD-RTIKVWR 224
Query: 617 IWEGTPIR 624
+G R
Sbjct: 225 AHDGVLCR 232
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 191 (72.3 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 42/141 (29%), Positives = 73/141 (51%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+GH ++ F G+++ + S D+ +KIW + GH+ I+D+A S ++
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSK 101
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+ SAS+D I++W + G + L+GH V ++F+P+ + I +S S D RIWD
Sbjct: 102 LICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLI---VSGSFDENVRIWD 158
Query: 359 ARYSQYSPRIYLPKPPDAITG 379
+ + I P +TG
Sbjct: 159 VNTGECTKMISAHSDP--VTG 177
Score = 175 (66.7 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 34/127 (26%), Positives = 68/127 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L GH++ + + + + + + SDD+ +KIW +E+ + + +GH+ + ++ +
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G ++ H+ VT + F+ R + ++S S DGT RI
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFN-RDGTL--VVSGSYDGTVRI 198
Query: 357 WDARYSQ 363
WD Q
Sbjct: 199 WDTTTGQ 205
Score = 170 (64.9 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 36/129 (27%), Positives = 64/129 (49%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V+ + +K L+GH++ V+ F+ +++GS D V+IW + T C H +T
Sbjct: 117 VESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVT 176
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSS 348
+ + + TLV S S D +R+W G ++ + G V+ + FSP + L+
Sbjct: 177 GVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFV---LAG 233
Query: 349 SDDGTCRIW 357
+ D T R+W
Sbjct: 234 TLDNTLRLW 242
Score = 137 (53.3 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 42/162 (25%), Positives = 72/162 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ I WS D++ + +A D I +W+ G +V +L GH YV V FNP+ + +S
Sbjct: 91 ISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHK--EYVFGVS-FNPQSNLIVS 147
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE-- 663
+D +WD+ G ++ + F+ DGT +V G + + +T G+
Sbjct: 148 GSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
Query: 664 ---SQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRN 702
S +D K F + P + L LD +L + N
Sbjct: 208 NTISTEDGKEVSFV--KFSPNGKFVLAGTLDNTLRLWSYNNN 247
Score = 58 (25.5 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
+N +GT+ V+GS D R+W Q ++ + G E V++V+FS
Sbjct: 180 FNRDGTLVVSGSYDGTVRIWDTTTG------QLLNTISTEDGKE--VSFVKFS 224
Score = 52 (23.4 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
++++ D I ++N +V +L GH + HP IA A R++ +W
Sbjct: 274 KWIVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 39 (18.8 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 1290 KTRTDIEAFDGGMEDGINHEASGIDSPEAASGSIRKTRSMKM 1331
+TR ++ G ED + A ASG++ K RS+K+
Sbjct: 291 QTREIVQTL-AGHEDVVLTVACHPTENIIASGALEKDRSVKI 331
Score = 37 (18.1 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 16/77 (20%), Positives = 31/77 (40%)
Query: 395 LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H I ++ +G + S+D ++W A E + L GH+ ++
Sbjct: 42 LKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT---------LEGHKEGIS 92
Query: 453 YVQFSGCAVASRSAMSD 469
+ +S + SA D
Sbjct: 93 DIAWSQDSKLICSASDD 109
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 165 (63.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 39/129 (30%), Positives = 66/129 (51%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V + + + L H + V CA F GR + + SDD+ VK+W + C+ S H G
Sbjct: 133 VHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFAN 192
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + T +A+A D ++VW + + + HT AV +++F PS Y L+++S
Sbjct: 193 HVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSF--HPSGNY-LITAS 249
Query: 350 DDGTCRIWD 358
+D T +I D
Sbjct: 250 NDSTLKILD 258
Score = 161 (61.7 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 43/132 (32%), Positives = 69/132 (52%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET---AFCLASCRGHEGDITDLAV 293
+ RGHRDA+ F + + + +GS D +KIWSM+ A+CL GH+ + +
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLV---GHKDAVMCVQF 70
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
S + LVAS S D + +W +P S V + HT V ++ FS S L+++SDD
Sbjct: 71 SPSGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFS---SDGQSLVTASDDK 126
Query: 353 TCRIWDARYSQY 364
T ++W ++
Sbjct: 127 TIKVWTVHRQKF 138
Score = 151 (58.2 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 39/120 (32%), Positives = 56/120 (46%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH+DAV C F SG V +GS D+ V +W + H + + SS+
Sbjct: 58 LVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQ 117
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ +AS+D I+VW + + L H V FSP I S+SDD T ++WD
Sbjct: 118 SLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLI---ASASDDKTVKLWD 174
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/210 (23%), Positives = 80/210 (38%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+ H V F G+ ++T SDD+ +K+W++ L S H + S + L
Sbjct: 101 KAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRL 160
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+ASAS+D +++W I H G + F P + I ++ D T ++WD
Sbjct: 161 IASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCI---AAAGTDKTVKVWDV 217
Query: 360 R-------YSQYSPRI----YLPKPPDAITGKXXXXXXXXXXXXX----XLQSHQ--ILC 402
R Y ++ + + P IT L HQ C
Sbjct: 218 RMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATC 277
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVE 432
A++ G F +G SD VW S+ +
Sbjct: 278 VAFSRTGDFFASGGSDEQVMVWKTNFSAAD 307
Score = 102 (41.0 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R + +A D + +W+ +HS H + ++ HP IA +AG D
Sbjct: 154 FSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIA-AAGTDKTV 212
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWD+ ++ Y++ + F P G ++ + + + +L+ +G
Sbjct: 213 KVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEG 262
Score = 58 (25.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + +++ A D + + + ++G L+++L GH + + A S G
Sbjct: 233 VNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFA-SGG 291
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 292 SDEQVMVW 299
Score = 41 (19.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 13/69 (18%), Positives = 28/69 (40%)
Query: 1416 SWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSINGYISAVETCKVV 1475
++L+ + ++ + + L ++Y+ GHQ G +++ G V K
Sbjct: 243 NYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKT- 301
Query: 1476 NLVYATFPG 1484
N A + G
Sbjct: 302 NFSAADYDG 310
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 172 (65.6 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 37/124 (29%), Positives = 64/124 (51%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +AV F +G+++ +GS D V+ W + T +C+GH + ++ S +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 169
Query: 299 LVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+AS + + +W GL + L GH+ +T +++ P P Y + SSS DG+
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRY-VASSSKDGSV 228
Query: 355 RIWD 358
R+WD
Sbjct: 229 RVWD 232
Score = 164 (62.8 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 45/139 (32%), Positives = 75/139 (53%)
Query: 224 AKPSTMVQKMQ-NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWS-METAFCLASC 281
A+ + Q +Q ++K+L+ + Y + + +++GSDD + +WS E LA
Sbjct: 309 AEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARM 368
Query: 282 RGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
GH+ I + S ++ +VASAS D I++W G ++ LRGH AV IA+S S
Sbjct: 369 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA-DSR 427
Query: 342 IYQLLSSSDDGTCRIWDAR 360
+ L+S S D T ++WD +
Sbjct: 428 L--LVSGSSDSTLKVWDVK 444
Score = 155 (59.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ ++ GH+ + +F R V + S D+ +K+W T LAS RGH + +A S+
Sbjct: 365 LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S S+D ++VW + + L GH V A+ +SP + S D R
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRV---ASGGKDKCLR 481
Query: 356 IW 357
IW
Sbjct: 482 IW 483
Score = 115 (45.5 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
R+V + S D V++W C GH +T L + L+ SAS D I+VWR
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH 275
Query: 316 DGLPISVLRGHTGAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 276 DGVLCRTLQGHGHWVNTMALS 296
Score = 104 (41.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/82 (30%), Positives = 37/82 (45%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C +S GH + +A S +AS S D +R W L P +GH V +I++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWS 165
Query: 337 PRPSAIYQLLSSSDDGTCRIWD 358
P +L S +G +WD
Sbjct: 166 PDGK---KLASGCKNGQVLLWD 184
Score = 98 (39.6 bits), Expect = 4.6e-14, Sum P(2) = 4.6e-14
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N +++S D+R V +A D I +W+ G + SL GH A+ Y + + R+ +S
Sbjct: 375 INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 433
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 434 SDSTLKVWDV 443
Score = 96 (38.9 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I WS D+R +++ D + VW+ L L GH+ Y +D P R+A S G
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA-SGG 475
Query: 608 YDGRTIVW 615
D +W
Sbjct: 476 KDKCLRIW 483
Score = 61 (26.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R+V ++ D + VW+ G LTGH+ S V + + SA D RTI VW
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQS--VTCLRWGGDGLLYSASQD-RTIKVWR 273
Query: 617 IWEGTPIR 624
+G R
Sbjct: 274 AHDGVLCR 281
Score = 59 (25.8 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
V + W D + +A D I VW A DG L +L GH
Sbjct: 249 VTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 286
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 166 (63.5 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 223 IAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR 282
+A PS ++ + +GHRDAV C F + + + +GS D + IW M+
Sbjct: 1 MAAPSQEDPSLE--RHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFT 58
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSPRPSA 341
GH+ +T + S + L+AS S D +R+W +P+ S V R HT V ++ F S
Sbjct: 59 GHKDAVTCVNFSPSGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SD 114
Query: 342 IYQLLSSSDDGTCRIWDARYSQY 364
L+++SDD T ++W ++
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQRF 137
Score = 165 (63.1 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L H + V CA F GR +++ SDD+ VK+W + C+ S H G +T + + T
Sbjct: 141 LTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGT 200
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+A D ++VW + + H+ AV A++F PS Y L+++S D T +I D
Sbjct: 201 CIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF--HPSGNY-LITASSDSTLKILD 257
Score = 148 (57.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/204 (25%), Positives = 78/204 (38%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
R H V F G+ ++T SDD+ VK+WS L S H + S + L
Sbjct: 100 RAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRL 159
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+ SAS+D +++W I H G VT + F P + I ++ D T ++WDA
Sbjct: 160 IVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCI---AAAGMDNTVKVWDA 216
Query: 360 R-------YSQYSPRI----YLPKPPDAITGKXXXXXXXXXXXXX----XLQSHQ--ILC 402
R Y +S + + P IT L HQ
Sbjct: 217 RTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 403 CAYNANGTVFVTGSSDTFARVWSA 426
A++ G F +G SD VW +
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVWKS 300
Score = 101 (40.6 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++A D + +W+ +HS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWD ++ Y++ + F P G ++ + + +L+ +G
Sbjct: 212 KVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEG 261
Score = 61 (26.5 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + +++ A D + + + ++G L+++L GH + + A S G
Sbjct: 232 VNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 37 (18.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 7/49 (14%), Positives = 22/49 (44%)
Query: 1416 SWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSING 1464
++L+ + + + + + ++Y+ GHQ + G +++ G
Sbjct: 242 NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 216 (81.1 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 48/128 (37%), Positives = 74/128 (57%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
QK++ + GH +Y F +GRF+++GS DR ++W +ET C+ G +T
Sbjct: 392 QKVRYV--FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENG-VTA 448
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+A+S N+ +A S D +IRVW + G + L GH +V +IAFSP S+I LLS S
Sbjct: 449 IAISPNDQFIAVGSLDQIIRVWSV-SGTLVERLEGHKESVYSIAFSP-DSSI--LLSGSL 504
Query: 351 DGTCRIWD 358
D T ++W+
Sbjct: 505 DKTIKVWE 512
Score = 153 (58.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/107 (35%), Positives = 51/107 (47%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIR 310
F G++++TG++DR +K+W + T GHE DI L S N + S S D R
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTAR 427
Query: 311 VWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+W + G I L G VTAIA SP I S D R+W
Sbjct: 428 LWDVETGQCILKLEIENG-VTAIAISPNDQFI---AVGSLDQIIRVW 470
Score = 152 (58.6 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 37/134 (27%), Positives = 62/134 (46%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETA------------FCLASCRG 283
+++L GH+++VY F +++GS D+ +K+W ++ C A+ G
Sbjct: 477 VERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTG 536
Query: 284 HEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
H + +AVS ++ S S D ++ W L G +GH +V ++ FSP
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGR--- 593
Query: 344 QLLSSSDDGTCRIW 357
Q S S D RIW
Sbjct: 594 QFASGSGDLRARIW 607
Score = 59 (25.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/107 (25%), Positives = 45/107 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVW----------NAV--DGSLVHSLTGHSASSYVLDV 595
V I +S D+ +L+ +D I VW +A+ +G + TGH+ + V
Sbjct: 487 VYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAV 546
Query: 596 HPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
P + R +S D WD+ G + + ++ FSPDG
Sbjct: 547 SP-DSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDG 592
Score = 55 (24.4 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 554 SLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI 613
S D+R+ L+ D + W+ G + GH S + P + A +G D R
Sbjct: 547 SPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQFASGSG-DLRAR 605
Query: 614 VWDIWEGTP 622
+W I +P
Sbjct: 606 IWSIDPASP 614
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 177 (67.4 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 44/128 (34%), Positives = 67/128 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 49 IMLLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVY-GDCENYATLKGHSGAVMELHY 107
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL-SSSDDG 352
+++ +L+ SAS D + VW G + L+GHT V + F R QL + SDDG
Sbjct: 108 NTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNS-CFPARRGP--QLACTGSDDG 164
Query: 353 TCRIWDAR 360
T ++WD R
Sbjct: 165 TVKLWDIR 172
Score = 150 (57.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 45/137 (32%), Positives = 69/137 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSG-RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V R G + TGSDD VK+W + AS + L+
Sbjct: 132 ERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKK---ASVHTFQNTYQVLS 188
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L I ++GH +VT ++ S S Y LLS+S
Sbjct: 189 VTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGS--Y-LLSNSM 245
Query: 351 DGTCRIWDARYSQYSPR 367
D + R+WD R ++P+
Sbjct: 246 DNSVRVWDIR--PFAPK 260
Score = 120 (47.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/148 (22%), Positives = 66/148 (44%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+N L+GH AV ++ G + + S D+ V +W ET + +GH +
Sbjct: 90 ENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFP 149
Query: 294 SSNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ L + S+D +++W + + + +T V ++ F+ Q++S D
Sbjct: 150 ARRGPQLACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSD---QIISGGIDN 205
Query: 353 TCRIWDARYSQYSPRIY-LPKPPDAITG 379
++WD R ++ IY + D++TG
Sbjct: 206 DIKVWDLRQNKL---IYSMQGHGDSVTG 230
Score = 85 (35.0 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + A D + +W+ +V+ L GH+ S + HP P I +S D R
Sbjct: 283 WSADGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEP-IVLSGSSDKRL 341
Query: 613 IVWDI 617
+ +I
Sbjct: 342 YIGEI 346
Score = 71 (30.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L++S+ GH S L + + +S D VWDI
Sbjct: 198 IISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYL-LSNSMDNSVRVWDIRP 256
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P ++I++ + F+ L+ +S DG+ I +Y+ +T
Sbjct: 257 FAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDT 304
Score = 66 (28.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 16/57 (28%), Positives = 28/57 (49%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
+L C+++A+G+ GS+D F +W + +++L GH VN V F
Sbjct: 278 LLRCSWSADGSKIAAGSADRFVYIWDTTTRRI------VYKLP---GHAGSVNEVAF 325
Score = 38 (18.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 1435 DEVIYSRQGHQEFIESTGSQEVGPWWSINGYISAV 1469
+++IYS QGH + + G + N ++V
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSV 249
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 170 (64.9 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +AV F +G+++ +GS D V+ W + T +C+GH + ++ S +
Sbjct: 111 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 170
Query: 299 LVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+AS + I +W G + L GH+ +TA+++ P P Y + SSS DG+
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRY-VASSSKDGSV 229
Query: 355 RIWD 358
R+WD
Sbjct: 230 RVWD 233
Score = 153 (58.9 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ ++ GH+ + +F R + + S D+ +K+W T LAS RGH + +A S+
Sbjct: 366 LARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 425
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S S+D ++VW + + L GH V A+ +SP + S D R
Sbjct: 426 DSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRV---ASGGKDKCLR 482
Query: 356 IW 357
IW
Sbjct: 483 IW 484
Score = 118 (46.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
R+V + S D V++W C + GH +T L + L+ SAS D I+VWR
Sbjct: 218 RYVASSSKDGSVRVWDTTAGRCERTLTGHAQSVTCLRWGGDG-LLYSASQDRTIKVWRAH 276
Query: 316 DGLPISVLRGHTGAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 277 DGVLCRTLQGHGHWVNTMALS 297
Score = 103 (41.3 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/82 (30%), Positives = 37/82 (45%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C +S GH + +A S +AS S D +R W L P +GH V +I++S
Sbjct: 107 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 166
Query: 337 PRPSAIYQLLSSSDDGTCRIWD 358
P +L S +G +WD
Sbjct: 167 PDGK---KLASGCKNGQILLWD 185
Score = 99 (39.9 bits), Expect = 6.1e-14, Sum P(2) = 6.1e-14
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N +V+S D+R + +A D I +W+ G + SL GH A+ Y + + R+ +S
Sbjct: 376 INQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 434
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 435 SDSTLKVWDV 444
Score = 94 (38.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I WS D+R +++ D + VW+ L L GH+ Y +D P R+A S G
Sbjct: 418 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVA-SGG 476
Query: 608 YDGRTIVW 615
D +W
Sbjct: 477 KDKCLRIW 484
Score = 64 (27.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R+V ++ D + VW+ G +LTGH+ S V + + SA D RTI VW
Sbjct: 218 RYVASSSKDGSVRVWDTTAGRCERTLTGHAQS--VTCLRWGGDGLLYSASQD-RTIKVWR 274
Query: 617 IWEGTPIR 624
+G R
Sbjct: 275 AHDGVLCR 282
Score = 62 (26.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 31/111 (27%), Positives = 45/111 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS--------ASSYVLDVHPFN 599
V + W D + +A D I VW A DG L +L GH ++ Y L F
Sbjct: 250 VTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFE 308
Query: 600 PRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDD 650
P A D R + ++ E + R+ LV G+ P+ + SDD
Sbjct: 309 PAEASVNAQDLRGSLQELKERA------LSRYNLVRGQ-GPERL-VSGSDD 351
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 182 (69.1 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 245 AVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASAS 304
AV F+ G +++T D+ +K+WS+ L + GH ++ D S +N+ + S S
Sbjct: 27 AVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCS 86
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQY 364
+D + +W + G LRGH G V + F+ + +LS S DGT R WD R +
Sbjct: 87 SDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATV---MLSGSIDGTVRCWDTRSRRM 143
Query: 365 SPRIYLPKPPDAIT 378
P L + D I+
Sbjct: 144 EPIQILDESQDGIS 157
Score = 100 (40.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 33/130 (25%), Positives = 55/130 (42%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K GH V A + + S D+ V +W + + RGH G + + +
Sbjct: 60 LKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNE 119
Query: 296 NNTLVASASNDFVIRVW--RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
T++ S S D +R W R PI +L ++++ S ++LL+ S DG
Sbjct: 120 EATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSLKVSE-----HELLTGSVDGR 174
Query: 354 CRIWDARYSQ 363
R +D R Q
Sbjct: 175 VRRYDLRMGQ 184
Score = 76 (31.8 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 20/56 (35%), Positives = 26/56 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
VL+ D + W+ V+GSL L A L HP PR+ S +GR VW
Sbjct: 250 VLSCSEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTSM--EGRVQVW 303
Score = 75 (31.5 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 21/102 (20%), Positives = 43/102 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRI-AMSA 606
+ + +S D + L++ +D + + + G ++ +GH Y LD + +S
Sbjct: 194 ITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSC 253
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLS 648
DG WD+ EG+ +G+ + F P ++ S
Sbjct: 254 SEDGHVYYWDLVEGSLTLKLPVGKAVVQSLSFHPTEPRLLTS 295
Score = 45 (20.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 1380 STVKSRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSWLMLSEHEEGYRY 1429
STV+ +ST G++ GH + G K + + +LS E+G+ Y
Sbjct: 213 STVRLLDKSTGEMLGEYSGH--VNKGYKLDCCLTDKDTHVLSCSEDGHVY 260
Score = 39 (18.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 488 NIVTCSRDGSAIIW 501
++++CS DG W
Sbjct: 249 HVLSCSEDGHVYYW 262
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 220 (82.5 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 61/236 (25%), Positives = 109/236 (46%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+N +KL GH VY F +++++ S+D+ V++WS++T L S +GH + D+
Sbjct: 508 ENTRKLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKF 567
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S +AS+D R+W P+ + GH V + F P + ++ + S D T
Sbjct: 568 SPLGHYFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVF---TGSSDKT 624
Query: 354 CRIWDARYSQYSPRIYLPKP---------PD----AITGKXXXXXXXXXXXXXXLQS--- 397
CR+WD ++ R++L PD A G+ L+S
Sbjct: 625 CRMWDV-HTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRG 683
Query: 398 H---QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEND 450
H + A++ +GTV V+G +D RVW K++ + +P + ++G+E +
Sbjct: 684 HARASLYSLAFSRDGTVLVSGCADNSVRVWDVKKNTNDAGPEPEAFNNNVNGNETN 739
Score = 114 (45.2 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 36/136 (26%), Positives = 58/136 (42%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSME---TAFCLASCR-----------GHEGDITDLAV 293
C F+ V G D +K+WS++ L R GH G + ++
Sbjct: 466 CIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSF 525
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S +N + S S D +R+W L + +GHT V + FSP + +++S D T
Sbjct: 526 SPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLG---HYFVTASHDQT 582
Query: 354 CRIWDARYSQYSPRIY 369
R+W + Y RI+
Sbjct: 583 ARLWATDHI-YPLRIF 597
Score = 107 (42.7 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 256 RFVITGSDDRL-VKIWSMETAF---CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRV 311
+ +I D R +K+ +++ + C+ + ++T + + ++TLVA+ D I++
Sbjct: 428 KMIIQVEDSRSKIKLGAIQASLPSVCMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKL 487
Query: 312 WRLPDGLPI-SVLR--------------GHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
W L DG P+ SVL+ GH+G V ++FSP Y LLS S+D T R+
Sbjct: 488 WSL-DGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNK--Y-LLSCSEDKTVRL 543
Query: 357 W 357
W
Sbjct: 544 W 544
Score = 96 (38.9 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 30/100 (30%), Positives = 44/100 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V+ + + ++ +V D +W+ G+ V GH+ S L V P + R S G
Sbjct: 604 VDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSP-DGRWLASGG 662
Query: 608 YDGRTIVWDIWEGTPIRIYE-IGRFKLVDGKFSPDGTSIV 646
DG VWDI G ++ R L FS DGT +V
Sbjct: 663 EDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLV 702
Score = 87 (35.7 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS-ASSYVLDVHPFNPRIAMSA 606
VN + S D R++ + D ICVW+ G + S+ GH+ AS Y L + + +S
Sbjct: 646 VNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSL-AFSRDGTVLVSG 704
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKL-VDG-KFSPDGTS 644
D VWD+ + T E F V+G + + DGTS
Sbjct: 705 CADNSVRVWDVKKNTNDAGPEPEAFNNNVNGNETNSDGTS 744
Score = 72 (30.4 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 29/117 (24%), Positives = 48/117 (41%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSL-VHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI 613
L + FV A+ D +W A D + GH ++ HP N + D
Sbjct: 570 LGHYFVTAS-HDQTARLW-ATDHIYPLRIFAGHINDVDCVEFHP-NSNYVFTGSSDKTCR 626
Query: 614 VWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAK 669
+WD+ G +R++ +G V+ SPDG + + G I + + G G K +
Sbjct: 627 MWDVHTGNCVRVF-LGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMR 682
Score = 68 (29.0 bits), Expect = 2.5e-08, Sum P(3) = 2.5e-08
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 409 GTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
G FVT S D AR+W+ I+ L + +GH NDV+ V+F
Sbjct: 571 GHYFVTASHDQTARLWAT---------DHIYPLRIFAGHINDVDCVEF 609
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 187 (70.9 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 43/121 (35%), Positives = 62/121 (51%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH + V +F GR + +GS+D +K+W + + GH I LA S N
Sbjct: 193 LGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQ 252
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIW 357
L+AS S+D I++W G L+GH+ V ++ FSP QLL S S D T ++W
Sbjct: 253 LLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDS----QLLESGSGDNTIKLW 308
Query: 358 D 358
D
Sbjct: 309 D 309
Score = 185 (70.2 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 61/240 (25%), Positives = 101/240 (42%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH D + F GR + +GS+D +K+W + + GH + +A S
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 296 NNTLVASASNDFVIRVWR-LPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS---SDD 351
N L+AS S+D I++W D L + GH+ V ++AFSP + S + +
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLK-HTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
Query: 352 GTCRIWDARYSQYSPRIYLPKPPDAI-TGKXXXXXXXXXXXXXXLQSHQILCCAYNANGT 410
G W + +SP L A T K S+ +L ++ +G
Sbjct: 153 GHSD-WVLSVA-FSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGR 210
Query: 411 VFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDA 470
+ +GS+D ++W S++ H L+ GH N + + FS S SDA
Sbjct: 211 LLASGSNDATIKLWDPPSGSLK------HTLE---GHSNKIESLAFSPNGQLLASGSSDA 261
Score = 123 (48.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH + + F +G+ + +GS D +K+W T + +GH + + S ++
Sbjct: 235 LEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQ 294
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+ S S D I++W G+ +R G V +I FS + QL+++ + + W
Sbjct: 295 LLESGSGDNTIKLWDPATGILKHSMRT-PGIVRSIEFSIE---LPQLITNLGTFSIQAWH 350
Query: 359 ARYSQYS 365
Y S
Sbjct: 351 TGYPSRS 357
Score = 121 (47.7 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 53/233 (22%), Positives = 87/233 (37%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +V F +G+ + +GS D +K+W+ + + GH + +A S N
Sbjct: 79 LEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ 138
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP-----RPSAIYQLLSSSDDGT 353
L W G + GH+ V ++AFSP + + + D T
Sbjct: 139 L------------WNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSAT 186
Query: 354 CRIWDAR--YSQYS-PRIYLPKPPDAITGKXXXXXXX----XXXXXXXLQSH--QILCCA 404
C + +S + P ++ P +G L+ H +I A
Sbjct: 187 CGLKHTLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLA 246
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
++ NG + +GSSD ++W S H L GH + V V FS
Sbjct: 247 FSPNGQLLASGSSDATIKLWDTATGSFR------H---TLKGHSDMVLSVVFS 290
Score = 95 (38.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 30/92 (32%), Positives = 42/92 (45%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDG 610
+V+S D R + + D I +W+ GSL H+L GHS L P N ++ S D
Sbjct: 203 LVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSP-NGQLLASGSSDA 261
Query: 611 RTIVWDIWEGTPIRIYEIGRFKLV-DGKFSPD 641
+WD G+ R G +V FSPD
Sbjct: 262 TIKLWDTATGS-FRHTLKGHSDMVLSVVFSPD 292
Score = 76 (31.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 24/73 (32%), Positives = 34/73 (46%)
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQL 345
G ITD+ V NTL ++ V W G + L GH+ + + FSP L
Sbjct: 5 GIITDI-VDCINTLQSTLQRPKVEDNW----GPELQTLEGHSDWIETVTFSPDGRL---L 56
Query: 346 LSSSDDGTCRIWD 358
S S+D T ++WD
Sbjct: 57 ASGSNDTTIKLWD 69
Score = 73 (30.8 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAM-SA 606
+ + +S + + + + D I +W+ GS H+L GHS VL V F+P + +
Sbjct: 242 IESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHS--DMVLSV-VFSPDSQLLES 298
Query: 607 GYDGRTI-VWD 616
G TI +WD
Sbjct: 299 GSGDNTIKLWD 309
Score = 51 (23.0 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 1396 HDGHPCLLSGRKSNFPVRKLSWLMLSEHEE 1425
H G+P SG+K+ V++ W+ + +E
Sbjct: 350 HTGYPSRSSGKKTAVSVQRNRWVAIQGQKE 379
Score = 45 (20.9 bits), Expect = 5.3e-11, Sum P(3) = 5.3e-11
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSL 583
+V+S D++ + + D I +W+ G L HS+
Sbjct: 287 VVFSPDSQLLESGSGDNTIKLWDPATGILKHSM 319
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 180 (68.4 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 43/133 (32%), Positives = 66/133 (49%)
Query: 232 KMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++++ K L+GH D V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 249 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 306
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ N ++ S S D ++VW G I L GHT V + + +++S S
Sbjct: 307 SQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 359
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 360 DATLRVWDIETGQ 372
Score = 173 (66.0 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 68/291 (23%), Positives = 121/291 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + +I+GS DR +K+W+ ET C+ + GH + + +
Sbjct: 294 LRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 351
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V S S D +RVW + G + VL GH AV + + R +++S + D +
Sbjct: 352 KR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-----RVVSGAYDFMVK 404
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
+WD ++ R+Y + ++G L HQ L
Sbjct: 405 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 464
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVA 462
+ V+G++D+ ++W K+ Q + L + H++ V +QF+ V
Sbjct: 465 SGMELKDNILVSGNADSTVKIWDI-KTG-----QCLQTLQGPNKHQSAVTCLQFNKNFVI 518
Query: 463 SRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA-IIWIPRSRRSHGKV 512
+ S D + + K F N+VT GS ++W R R S+ K+
Sbjct: 519 TSS--DDGTVK--LWDLKTGEFIR-NLVTLESGGSGGVVW--RIRASNTKL 562
Score = 168 (64.2 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q + L GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 368 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 425
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + V S S D IRVW + G I L GH + + L+S +
Sbjct: 426 SLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 478
Query: 350 DDGTCRIWDARYSQYSPRIYLP-KPPDAIT 378
D T +IWD + Q + P K A+T
Sbjct: 479 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 508
Score = 90 (36.7 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ +H+LTGH + + +++ I +S D
Sbjct: 424 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNILVSGNAD 480
Query: 610 GRTIVWDIWEG 620
+WDI G
Sbjct: 481 STVKIWDIKTG 491
Score = 84 (34.6 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V++ D + VW+ + +H+L GH+ Y L F+ +S D VW
Sbjct: 390 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSGSLDTSIRVW 446
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV-LSDDVGQIYLLNTGQ 661
D+ G I G L G D + +D +I+ + TGQ
Sbjct: 447 DVETGNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 492
Score = 69 (29.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 469 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 528
Query: 615 WDIWEGTPIR 624
WD+ G IR
Sbjct: 529 WDLKTGEFIR 538
Score = 37 (18.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSL-TGHSASS--YVLDVHPFNPRIAMSAG 607
+ FV+ + D + +W+ G + +L T S S V + N ++ + G
Sbjct: 513 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 567
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 184 (69.8 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 37/128 (28%), Positives = 62/128 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+GH AV A F+ G + +T DR +++W+ + + + H ++ D+ V+S+N
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
S D + W + G I RGH G V A+ F+ S + +S+ D + R+WD
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVV---VSAGFDRSLRVWD 130
Query: 359 ARYSQYSP 366
R P
Sbjct: 131 CRSHSVEP 138
Score = 129 (50.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH--EGDITDLAVSSNNTLVASA 303
V C G V+ G D +++ T L +GH + TD +++++ V
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S D ++ W L D +S R H VT++++ P+ +L+SS DGT R+W
Sbjct: 247 SEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDC---MLTSSVDGTIRVW 297
Score = 114 (45.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 236 IKKLRGH-RDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
IK + H R+ + + +F G D R V W + T + RGH+G++ + +
Sbjct: 53 IKTYKSHGREVRDVHVTSDNAKFCSCGGD-RQVYYWDVSTGRVIRKFRGHDGEVNAVKFN 111
Query: 295 SNNTLVASASNDFVIRVW--RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
++++V SA D +RVW R P+ ++ V ++ + +++ S DG
Sbjct: 112 DSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKT-----EIIGGSVDG 166
Query: 353 TCRIWDAR 360
T R +D R
Sbjct: 167 TVRTFDMR 174
Score = 70 (29.7 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 21/71 (29%), Positives = 30/71 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN I S D VLA +D + + + G L+ GH + S+ D N + G
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 608 Y-DGRTIVWDI 617
DG WD+
Sbjct: 247 SEDGLVFFWDL 257
Score = 49 (22.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/56 (21%), Positives = 21/56 (37%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
V+ D + W+ VD ++ H + HP +++ DG VW
Sbjct: 243 VIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHP-KEDCMLTSSVDGTIRVW 297
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 181 (68.8 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 38/129 (29%), Positives = 71/129 (55%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+GH + VY FD G V++GS D +++W +ET C+ + GH+ + + + N
Sbjct: 459 LQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN-- 514
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRG---HTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ S + D +++W + G + L+G H AVT + F+ +++SSDDGT +
Sbjct: 515 ILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-----FVITSSDDGTVK 569
Query: 356 IWDARYSQY 364
+WD + ++
Sbjct: 570 LWDLKTGEF 578
Score = 180 (68.4 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 43/133 (32%), Positives = 66/133 (49%)
Query: 232 KMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++++ K L+GH D V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 291 ELRSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 348
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ N ++ S S D ++VW G I L GHT V + + +++S S
Sbjct: 349 SQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 401
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 402 DATLRVWDIETGQ 414
Score = 168 (64.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q + L GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + V S S D IRVW + G I L GH + + L+S +
Sbjct: 468 SLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 520
Query: 350 DDGTCRIWDARYSQYSPRIYLP-KPPDAIT 378
D T +IWD + Q + P K A+T
Sbjct: 521 ADSTVKIWDIKTGQCLQTLQGPSKHQSAVT 550
Score = 164 (62.8 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 54/235 (22%), Positives = 98/235 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + +I+GS DR +K+W+ ET C+ + GH + + +
Sbjct: 336 LRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 393
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V S S D +RVW + G + VL GH AV + + R +++S + D +
Sbjct: 394 KR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-----RVVSGAYDFMVK 446
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
+WD ++ R+Y + ++G L HQ L
Sbjct: 447 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 506
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
+ V+G++D+ ++W K+ Q + L S H++ V +QF+
Sbjct: 507 SGMELKDNILVSGNADSTVKIWDI-KTG-----QCLQTLQGPSKHQSAVTCLQFN 555
Score = 127 (49.8 bits), Expect = 0.00046, P = 0.00046
Identities = 51/208 (24%), Positives = 84/208 (40%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I L GH V C + V++GS D +++W +ET CL GH + V
Sbjct: 376 IHTLYGHTSTVRCMHLHE--KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQY 431
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ V S + DF+++VW + L+GHT V ++ F I+ ++S S D + R
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD----GIH-VVSGSLDTSIR 486
Query: 356 IWDAR----------YSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXX-LQS------H 398
+WD + + + L K ++G LQ+ H
Sbjct: 487 VWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKH 545
Query: 399 Q--ILCCAYNANGTVFVTGSSDTFARVW 424
Q + C +N N +T S D ++W
Sbjct: 546 QSAVTCLQFNKN--FVITSSDDGTVKLW 571
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 51/199 (25%), Positives = 76/199 (38%)
Query: 282 RGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
+GH+ + N +V S S+D ++VW G + L GHTG V + R +
Sbjct: 299 KGHDDHVITCLQFCGNRIV-SGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--RDNI 355
Query: 342 IYQLLSSSDDGTCRIWDAR--------YSQYSP-RIYLPKPPDAITGKXXXXXXXXXXXX 392
I +S S D T ++W+A Y S R ++G
Sbjct: 356 I---ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 412
Query: 393 XX----LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSG 446
L H + C Y+ G V+G+ D +VW ++E +H L G
Sbjct: 413 GQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDP------ETETCLH---TLQG 461
Query: 447 HENDVNYVQFSGCAVASRS 465
H N V +QF G V S S
Sbjct: 462 HTNRVYSLQFDGIHVVSGS 480
Score = 90 (36.7 bits), Expect = 8.4e-14, Sum P(2) = 8.4e-14
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ +H+LTGH + + +++ I +S D
Sbjct: 466 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNILVSGNAD 522
Query: 610 GRTIVWDIWEG 620
+WDI G
Sbjct: 523 STVKIWDIKTG 533
Score = 84 (34.6 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V++ D + VW+ + +H+L GH+ Y L F+ +S D VW
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSGSLDTSIRVW 488
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV-LSDDVGQIYLLNTGQ 661
D+ G I G L G D + +D +I+ + TGQ
Sbjct: 489 DVETGNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 534
Score = 72 (30.4 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L + +++ D + +W+ G + +L G S + FN +++ DG +
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 615 WDIWEGTPIR 624
WD+ G IR
Sbjct: 571 WDLKTGEFIR 580
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 170 (64.9 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 38/124 (30%), Positives = 64/124 (51%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +AV F +G+++ +GS D V+ W + T +C+GH + ++ S +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGK 169
Query: 299 LVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+AS + I +W G + L GH+ +TA+++ P P Y + SSS DG+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRY-VASSSKDGSV 228
Query: 355 RIWD 358
R+WD
Sbjct: 229 RVWD 232
Score = 156 (60.0 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 44/139 (31%), Positives = 75/139 (53%)
Query: 224 AKPSTMVQKMQ-NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWS-METAFCLASC 281
A+ S Q ++ ++++L+ + Y + R +++GSDD + +WS E LA
Sbjct: 309 AEASVNAQDLRGSLQELKERALSRYNLVRGRGLERLVSGSDDFTLFLWSPAEDKKPLARM 368
Query: 282 RGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
GH+ I + S ++ ++ASAS D I++W G ++ LRGH AV IA+S S
Sbjct: 369 TGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA-DSR 427
Query: 342 IYQLLSSSDDGTCRIWDAR 360
+ L+S S D T ++WD +
Sbjct: 428 L--LVSGSSDSTLKVWDVK 444
Score = 154 (59.3 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ ++ GH+ + +F R + + S D+ +K+W T LAS RGH + +A S+
Sbjct: 365 LARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S S+D ++VW + + L GH V A+ +SP + S D R
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRV---ASGGKDKCLR 481
Query: 356 IW 357
IW
Sbjct: 482 IW 483
Score = 115 (45.5 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
R+V + S D V++W C GH +T L + L+ SAS D I+VWR
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH 275
Query: 316 DGLPISVLRGHTGAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 276 DGVLCRTLQGHGHWVNTMALS 296
Score = 103 (41.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 25/82 (30%), Positives = 37/82 (45%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C +S GH + +A S +AS S D +R W L P +GH V +I++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 165
Query: 337 PRPSAIYQLLSSSDDGTCRIWD 358
P +L S +G +WD
Sbjct: 166 PDGK---KLASGCKNGQILLWD 184
Score = 97 (39.2 bits), Expect = 9.7e-14, Sum P(2) = 9.7e-14
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N +++S D+R + +A D I +W+ G + SL GH A+ Y + + R+ +S
Sbjct: 375 INQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 433
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 434 SDSTLKVWDV 443
Score = 96 (38.9 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I WS D+R +++ D + VW+ L L GH+ Y +D P R+A S G
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVA-SGG 475
Query: 608 YDGRTIVW 615
D +W
Sbjct: 476 KDKCLRIW 483
Score = 62 (26.9 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 27/98 (27%), Positives = 39/98 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS--------ASSYVLDVHPFN 599
V + W D + +A D I VW A DG L +L GH ++ Y L F
Sbjct: 249 VTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFE 307
Query: 600 PRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGK 637
P A D R + ++ E + R+ LV G+
Sbjct: 308 PAEASVNAQDLRGSLQELKERA------LSRYNLVRGR 339
Score = 61 (26.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R+V ++ D + VW+ G LTGH+ S V + + SA D RTI VW
Sbjct: 217 RYVASSSKDGSVRVWDTTAGRCERILTGHTQS--VTCLRWGGDGLLYSASQD-RTIKVWR 273
Query: 617 IWEGTPIR 624
+G R
Sbjct: 274 AHDGVLCR 281
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 180 (68.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 43/133 (32%), Positives = 66/133 (49%)
Query: 232 KMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++++ K L+GH D V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 289 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 346
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ N ++ S S D ++VW G I L GHT V + + +++S S
Sbjct: 347 SQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 399
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 400 DATLRVWDIETGQ 412
Score = 173 (66.0 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 68/291 (23%), Positives = 121/291 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + +I+GS DR +K+W+ ET C+ + GH + + +
Sbjct: 334 LRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 391
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V S S D +RVW + G + VL GH AV + + R +++S + D +
Sbjct: 392 KR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-----RVVSGAYDFMVK 444
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
+WD ++ R+Y + ++G L HQ L
Sbjct: 445 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 504
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVA 462
+ V+G++D+ ++W K+ Q + L + H++ V +QF+ V
Sbjct: 505 SGMELKDNILVSGNADSTVKIWDI-KTG-----QCLQTLQGPNKHQSAVTCLQFNKNFVI 558
Query: 463 SRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA-IIWIPRSRRSHGKV 512
+ S D + + K F N+VT GS ++W R R S+ K+
Sbjct: 559 TSS--DDGTVK--LWDLKTGEFIR-NLVTLESGGSGGVVW--RIRASNTKL 602
Score = 168 (64.2 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q + L GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 408 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + V S S D IRVW + G I L GH + + L+S +
Sbjct: 466 SLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 518
Query: 350 DDGTCRIWDARYSQYSPRIYLP-KPPDAIT 378
D T +IWD + Q + P K A+T
Sbjct: 519 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 548
Score = 90 (36.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ +H+LTGH + + +++ I +S D
Sbjct: 464 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNILVSGNAD 520
Query: 610 GRTIVWDIWEG 620
+WDI G
Sbjct: 521 STVKIWDIKTG 531
Score = 84 (34.6 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V++ D + VW+ + +H+L GH+ Y L F+ +S D VW
Sbjct: 430 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSGSLDTSIRVW 486
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV-LSDDVGQIYLLNTGQ 661
D+ G I G L G D + +D +I+ + TGQ
Sbjct: 487 DVETGNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 532
Score = 69 (29.3 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 509 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 568
Query: 615 WDIWEGTPIR 624
WD+ G IR
Sbjct: 569 WDLKTGEFIR 578
Score = 37 (18.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSL-TGHSASS--YVLDVHPFNPRIAMSAG 607
+ FV+ + D + +W+ G + +L T S S V + N ++ + G
Sbjct: 553 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 607
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 180 (68.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 43/133 (32%), Positives = 66/133 (49%)
Query: 232 KMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++++ K L+GH D V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 291 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 348
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ N ++ S S D ++VW G I L GHT V + + +++S S
Sbjct: 349 SQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 401
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 402 DATLRVWDIETGQ 414
Score = 176 (67.0 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 69/291 (23%), Positives = 121/291 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + +I+GS DR +K+W+ ET C+ + GH + + +
Sbjct: 336 LRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 393
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V S S D +RVW + G + VL GH AV + + R +++S + D +
Sbjct: 394 KR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-----RVVSGAYDFMVK 446
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
+WD ++ R+Y + ++G L HQ L
Sbjct: 447 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 506
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVA 462
+ V+G++D+ ++W K+ Q + L S H++ V +QF+ V
Sbjct: 507 SGMELKDNILVSGNADSTVKIWDI-KTG-----QCLQTLQGPSKHQSAVTCLQFNKNFVI 560
Query: 463 SRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA-IIWIPRSRRSHGKV 512
+ S D + + K F N+VT GS ++W R R S+ K+
Sbjct: 561 TSS--DDGTVK--LWDLKTGEFIR-NLVTLESGGSGGVVW--RIRASNTKL 604
Score = 168 (64.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q + L GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 410 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 467
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + V S S D IRVW + G I L GH + + L+S +
Sbjct: 468 SLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 520
Query: 350 DDGTCRIWDARYSQYSPRIYLP-KPPDAIT 378
D T +IWD + Q + P K A+T
Sbjct: 521 ADSTVKIWDIKTGQCLQTLQGPSKHQSAVT 550
Score = 90 (36.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ +H+LTGH + + +++ I +S D
Sbjct: 466 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNILVSGNAD 522
Query: 610 GRTIVWDIWEG 620
+WDI G
Sbjct: 523 STVKIWDIKTG 533
Score = 84 (34.6 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V++ D + VW+ + +H+L GH+ Y L F+ +S D VW
Sbjct: 432 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSGSLDTSIRVW 488
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV-LSDDVGQIYLLNTGQ 661
D+ G I G L G D + +D +I+ + TGQ
Sbjct: 489 DVETGNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 534
Score = 72 (30.4 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 16/70 (22%), Positives = 31/70 (44%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L + +++ D + +W+ G + +L G S + FN +++ DG +
Sbjct: 511 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITSSDDGTVKL 570
Query: 615 WDIWEGTPIR 624
WD+ G IR
Sbjct: 571 WDLKTGEFIR 580
Score = 37 (18.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSL-TGHSASS--YVLDVHPFNPRIAMSAG 607
+ FV+ + D + +W+ G + +L T S S V + N ++ + G
Sbjct: 555 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 609
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 168 (64.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 38/124 (30%), Positives = 63/124 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +AV F +G+++ +GS D V+ W + T +C+GH + ++ S +
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGR 169
Query: 299 LVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+AS + I +W G + L GH+ +T +++ P P Y + SSS DG+
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRY-VASSSKDGSV 228
Query: 355 RIWD 358
RIWD
Sbjct: 229 RIWD 232
Score = 153 (58.9 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 36/122 (29%), Positives = 59/122 (48%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ ++ GH+ + +F R V + S D+ +K+W T LAS RGH + +A S+
Sbjct: 365 LTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 424
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S S+D ++VW + L GH V A+ +SP + S D R
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRV---ASGGKDKCLR 481
Query: 356 IW 357
IW
Sbjct: 482 IW 483
Score = 116 (45.9 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 29/81 (35%), Positives = 39/81 (48%)
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
R+V + S D V+IW C GH +T L + L+ SAS D I+VWR
Sbjct: 217 RYVASSSKDGSVRIWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH 275
Query: 316 DGLPISVLRGHTGAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 276 DGVLCRTLQGHGHWVNTMALS 296
Score = 103 (41.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 25/82 (30%), Positives = 37/82 (45%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C +S GH + +A S +AS S D +R W L P +GH V +I++S
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWS 165
Query: 337 PRPSAIYQLLSSSDDGTCRIWD 358
P +L S +G +WD
Sbjct: 166 PDGR---KLASGCKNGQILLWD 184
Score = 98 (39.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N +++S D+R V +A D I +W+ G + SL GH A+ Y + + R+ +S
Sbjct: 375 INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 433
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 434 SDSTLKVWDV 443
Score = 96 (38.9 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I WS D+R +++ D + VW+ L L GH+ Y +D P R+A S G
Sbjct: 417 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA-SGG 475
Query: 608 YDGRTIVW 615
D +W
Sbjct: 476 KDKCLRIW 483
Score = 60 (26.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R+V ++ D + +W+ G LTGH+ S V + + SA D RTI VW
Sbjct: 217 RYVASSSKDGSVRIWDTTAGRCERILTGHTQS--VTCLRWGGDGLLYSASQD-RTIKVWR 273
Query: 617 IWEGTPIR 624
+G R
Sbjct: 274 AHDGVLCR 281
Score = 59 (25.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
V + W D + +A D I VW A DG L +L GH
Sbjct: 249 VTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 286
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 168 (64.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 37/124 (29%), Positives = 63/124 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +AV F +G+++ +GS D V+ W + T +C+GH + ++ S +
Sbjct: 112 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGK 171
Query: 299 LVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+AS + I +W G + L GH+ +T +++ P P Y + SSS DG+
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRY-VASSSKDGSV 230
Query: 355 RIWD 358
R+WD
Sbjct: 231 RVWD 234
Score = 164 (62.8 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 45/139 (32%), Positives = 75/139 (53%)
Query: 224 AKPSTMVQKMQ-NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWS-METAFCLASC 281
A+ + Q +Q ++K+L+ + Y + + +++GSDD + +WS E LA
Sbjct: 311 AEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARM 370
Query: 282 RGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
GH+ I + S ++ +VASAS D I++W G ++ LRGH AV IA+S S
Sbjct: 371 TGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA-DSR 429
Query: 342 IYQLLSSSDDGTCRIWDAR 360
+ L+S S D T ++WD +
Sbjct: 430 L--LVSGSSDSTLKVWDVK 446
Score = 155 (59.6 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 36/122 (29%), Positives = 60/122 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ ++ GH+ + +F R V + S D+ +K+W T LAS RGH + +A S+
Sbjct: 367 LARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSA 426
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S S+D ++VW + + L GH V A+ +SP + S D R
Sbjct: 427 DSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRV---ASGGKDKCLR 483
Query: 356 IW 357
IW
Sbjct: 484 IW 485
Score = 115 (45.5 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
R+V + S D V++W C GH +T L + L+ SAS D I+VWR
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAH 277
Query: 316 DGLPISVLRGHTGAVTAIAFS 336
DG+ L+GH V +A S
Sbjct: 278 DGVLCRTLQGHGHWVNTMALS 298
Score = 104 (41.7 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 25/82 (30%), Positives = 37/82 (45%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C +S GH + +A S +AS S D +R W L P +GH V +I++S
Sbjct: 108 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWS 167
Query: 337 PRPSAIYQLLSSSDDGTCRIWD 358
P +L S +G +WD
Sbjct: 168 PDGK---KLASGCKNGQILLWD 186
Score = 98 (39.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N +++S D+R V +A D I +W+ G + SL GH A+ Y + + R+ +S
Sbjct: 377 INQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQI-AWSADSRLLVSGS 435
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 436 SDSTLKVWDV 445
Score = 96 (38.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I WS D+R +++ D + VW+ L L GH+ Y +D P R+A S G
Sbjct: 419 VYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVA-SGG 477
Query: 608 YDGRTIVW 615
D +W
Sbjct: 478 KDKCLRIW 485
Score = 61 (26.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R+V ++ D + VW+ G LTGH+ S V + + SA D RTI VW
Sbjct: 219 RYVASSSKDGSVRVWDTTAGRCERILTGHTQS--VTCLRWGGDGLLYSASQD-RTIKVWR 275
Query: 617 IWEGTPIR 624
+G R
Sbjct: 276 AHDGVLCR 283
Score = 59 (25.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
V + W D + +A D I VW A DG L +L GH
Sbjct: 251 VTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGH 288
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 217 (81.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 48/125 (38%), Positives = 67/125 (53%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C F + +V TGS DR V++W + C+ GH+G I LA
Sbjct: 574 QPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 633
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +AS S D + +W + GL I+ L+GHTG + A+ FS R I + S S D T
Sbjct: 634 SPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFS-RDGEI--IASGSIDNT 690
Query: 354 CRIWD 358
R+WD
Sbjct: 691 VRLWD 695
Score = 180 (68.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 53/228 (23%), Positives = 93/228 (40%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K L GH VY F ++++ S+D +++WS++T CL +GH + D S
Sbjct: 493 KILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF 552
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
S +D V R+W P+ + GH VT F P + + + S D T R+
Sbjct: 553 GYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYV---ATGSSDRTVRL 609
Query: 357 WDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQ-- 399
WD ++ + I+ L P+ + G+ L+ H
Sbjct: 610 WDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGT 669
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGH 447
I ++ +G + +GS D R+W ++ ++D E + +GH
Sbjct: 670 IYALKFSRDGEIIASGSIDNTVRLWDVMRA-IDDVETD--DFTAATGH 714
Score = 107 (42.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 38/134 (28%), Positives = 57/134 (42%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A + D+ SDD L +I +T+ GH G + ++ S +
Sbjct: 458 KKLRKVKSAADLNLIDKE-------SDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPD 510
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D IR+W L + +GH V FSP Y +S D R+
Sbjct: 511 RNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFG---YYFVSGGHDRVARL 567
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 568 WATDH--YQPLRIF 579
Score = 105 (42.0 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 29/98 (29%), Positives = 47/98 (47%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
++ +V D + +W+ ++G+ V TGH + L P N + S DGR ++W
Sbjct: 594 NSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP-NGKFLASGSTDGRVLLW 652
Query: 616 DIWEGTPIRIYEI-GRFKLVDG-KFSPDGTSIVLSDDV 651
DI G + I E+ G + KFS DG I+ S +
Sbjct: 653 DIGHG--LMIAELKGHTGTIYALKFSRDG-EIIASGSI 687
Score = 81 (33.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + +A G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 581 GHLADVTCTRFHPNSNYVA--TGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGK 638
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 639 FLASGSTDGRVLLWDIGHG 657
Score = 81 (33.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 24/101 (23%), Positives = 43/101 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + +F+ + D R+ +W+ G ++ L GH+ + Y L IA S
Sbjct: 628 IHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIA-SGS 686
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFS-PDGTSIVL 647
D +WD+ I E F G PD + +L
Sbjct: 687 IDNTVRLWDVMRA--IDDVETDDFTAATGHIHLPDNSQELL 725
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 173 (66.0 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 38/125 (30%), Positives = 65/125 (52%)
Query: 239 LRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ GH +A+ F S +++GS D +IW +T L + +GH + ++ S N
Sbjct: 144 IAGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNG 203
Query: 298 TLVASASNDFVIRVWRLPDGLPISV-LRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGT 353
++A+ S D +R+W G + L+GH +T++A+ P + S +L S+S D T
Sbjct: 204 AMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDST 263
Query: 354 CRIWD 358
RIWD
Sbjct: 264 VRIWD 268
Score = 154 (59.3 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 66/242 (27%), Positives = 100/242 (41%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCL-ASCRGHEGDITDLA----- 292
L+GH V + +G + TGS D V+IW + L A +GH IT LA
Sbjct: 187 LKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYH 246
Query: 293 -VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S + +ASAS D +R+W + VL GH G+VT + + IY +SS D
Sbjct: 247 LQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSVTCVRWGGT-GKIY---TSSHD 302
Query: 352 GTCRIWDAR-------YSQYSPRI-YLPKPPDAI--------TGKXXXXXXXXXXXXXXL 395
T ++W+++ S ++ R+ +L D I TGK
Sbjct: 303 RTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAK-- 360
Query: 396 QSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
+ + N V+ S D +W E S +P+ L GH+ +VN+V
Sbjct: 361 KRFEKAATINNKIVEKLVSASDDFTMYLWDP-----ESSSKPVARL---LGHQKEVNHVT 412
Query: 456 FS 457
FS
Sbjct: 413 FS 414
Score = 144 (55.7 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 277 CLASCRGHEGDI--TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
C AS GH I T + S++T+V S S D R+W G P+ L+GHT V A++
Sbjct: 140 CSASIAGHGEAILATSFSPVSSSTMV-SGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVS 198
Query: 335 FSPRPSAIYQLLSSSDDGTCRIWDARYSQ 363
+SP + I + S D T RIWDA+ Q
Sbjct: 199 YSPNGAMI---ATGSMDNTVRIWDAKKGQ 224
Score = 136 (52.9 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 33/122 (27%), Positives = 55/122 (45%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ +L GH+ V F ++ + D VK+W+ + + RGH G + S+
Sbjct: 398 VARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSA 457
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S+S D ++VW + G L GH V A+ +SP + S D R
Sbjct: 458 DSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVG---SGGKDKAIR 514
Query: 356 IW 357
IW
Sbjct: 515 IW 516
Score = 124 (48.7 bits), Expect = 0.00080, P = 0.00080
Identities = 52/235 (22%), Positives = 103/235 (43%)
Query: 229 MVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
++ K +I L GH+ +V C + +G+ + T S DR +K+W+ +T + + H +
Sbjct: 269 VISKRADIV-LSGHKGSVTCVRWGGTGK-IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRV 326
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
LA+S++ ++ +A +D +V P+ V A + + + +L+S+
Sbjct: 327 NHLALSTD-FILRTAYHDHTGKV---PESDADKVAMAKKRFEKAATINNK--IVEKLVSA 380
Query: 349 SDDGTCRIWD--------ARYSQYSPRI-YLPKPPD----AITG---KXXXXXXXXXXXX 392
SDD T +WD AR + + ++ PD A G
Sbjct: 381 SDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFI 440
Query: 393 XXLQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLS 445
L+ H + C ++A+ + V+ S DT +VW+ + + + P H+ +V +
Sbjct: 441 TTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTGKLSE-DLPGHKDEVFA 494
Score = 91 (37.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 24/98 (24%), Positives = 45/98 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + +S D ++ +A D + +WN DG + +L GH + Y + R+ +S+
Sbjct: 408 VNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQC-CFSADSRLLVSSS 466
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSI 645
D VW++ G + ++ +SPDG +
Sbjct: 467 KDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKV 504
Score = 52 (23.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V + W + + + D I VWN+ G+L+ +L+ H+
Sbjct: 285 VTCVRWGGTGK-IYTSSHDRTIKVWNSQTGTLIQTLSAHA 323
Score = 48 (22.0 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 30/127 (23%), Positives = 53/127 (41%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L H+ + C + G ++ T S D +VW++ ++ + LS H + VN
Sbjct: 278 LSGHKGSVTCVRWGGTGKIY-TSSHDRTIKVWNSQTGTL---------IQTLSAHAHRVN 327
Query: 453 YVQFSGCAVASRSAM---------SDAFKEENVPK-FKNSWFCHDNIV----TCSRDGSA 498
++ S + R+A SDA K K F+ + ++ IV + S D +
Sbjct: 328 HLALSTDFIL-RTAYHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTM 386
Query: 499 IIWIPRS 505
+W P S
Sbjct: 387 YLWDPES 393
Score = 43 (20.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 562 AAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEG 620
+A D + +W+ + L+GH S V V ++ +D RTI VW+ G
Sbjct: 257 SASKDSTVRIWDVISKRADIVLSGHKGS--VTCVRWGGTGKIYTSSHD-RTIKVWNSQTG 313
Query: 621 TPIR 624
T I+
Sbjct: 314 TLIQ 317
Score = 39 (18.8 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 486 HDNIVTCSRDGSAIIWIPRSRRS 508
H + + S+D + IW S+R+
Sbjct: 252 HPRLASASKDSTVRIWDVISKRA 274
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 180 (68.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 43/133 (32%), Positives = 66/133 (49%)
Query: 232 KMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++++ K L+GH D V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 369 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 426
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ N ++ S S D ++VW G I L GHT V + + +++S S
Sbjct: 427 SQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 479
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 480 DATLRVWDIETGQ 492
Score = 173 (66.0 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 68/291 (23%), Positives = 121/291 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + +I+GS DR +K+W+ ET C+ + GH + + +
Sbjct: 414 LRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 471
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V S S D +RVW + G + VL GH AV + + R +++S + D +
Sbjct: 472 KR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-----RVVSGAYDFMVK 524
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
+WD ++ R+Y + ++G L HQ L
Sbjct: 525 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 584
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVA 462
+ V+G++D+ ++W K+ Q + L + H++ V +QF+ V
Sbjct: 585 SGMELKDNILVSGNADSTVKIWDI-KTG-----QCLQTLQGPNKHQSAVTCLQFNKNFVI 638
Query: 463 SRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA-IIWIPRSRRSHGKV 512
+ S D + + K F N+VT GS ++W R R S+ K+
Sbjct: 639 TSS--DDGTVK--LWDLKTGEFIR-NLVTLESGGSGGVVW--RIRASNTKL 682
Score = 168 (64.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q + L GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 488 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + V S S D IRVW + G I L GH + + L+S +
Sbjct: 546 SLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 598
Query: 350 DDGTCRIWDARYSQYSPRIYLP-KPPDAIT 378
D T +IWD + Q + P K A+T
Sbjct: 599 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 628
Score = 90 (36.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ +H+LTGH + + +++ I +S D
Sbjct: 544 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNILVSGNAD 600
Query: 610 GRTIVWDIWEG 620
+WDI G
Sbjct: 601 STVKIWDIKTG 611
Score = 84 (34.6 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V++ D + VW+ + +H+L GH+ Y L F+ +S D VW
Sbjct: 510 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSGSLDTSIRVW 566
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV-LSDDVGQIYLLNTGQ 661
D+ G I G L G D + +D +I+ + TGQ
Sbjct: 567 DVETGNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 612
Score = 69 (29.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 589 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 648
Query: 615 WDIWEGTPIR 624
WD+ G IR
Sbjct: 649 WDLKTGEFIR 658
Score = 37 (18.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSL-TGHSASS--YVLDVHPFNPRIAMSAG 607
+ FV+ + D + +W+ G + +L T S S V + N ++ + G
Sbjct: 633 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 687
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 197 (74.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 44/125 (35%), Positives = 67/125 (53%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I++L GH D V FD R +ITGS D+ +++W+ T C+++ RGH + L+V S
Sbjct: 335 IRRLSGHSDGVKTLYFD--DRKLITGSLDKTIRVWNYITGECISTYRGHSDSV--LSVDS 390
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ S S D ++VW + + LRGHT V + P+ + S SDD T R
Sbjct: 391 YQKVIVSGSADKTVKVWHV-ESRTCYTLRGHTEWVNCVKLHPKS---FSCFSCSDDTTIR 446
Query: 356 IWDAR 360
+WD R
Sbjct: 447 MWDIR 451
Score = 128 (50.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 36/122 (29%), Positives = 54/122 (44%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I++ +GH D V F+ R + TGS D + IW + T + GH + L
Sbjct: 295 IQEFKGHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD 352
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ S D IRVW G IS RGH+ +V ++ S ++S S D T +
Sbjct: 353 RKLITGSL--DKTIRVWNYITGECISTYRGHSDSVLSV-----DSYQKVIVSGSADKTVK 405
Query: 356 IW 357
+W
Sbjct: 406 VW 407
Score = 71 (30.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+L+ +D I +W+ G + + GH V D+ N RI +S +DG VWD+
Sbjct: 525 LLSCGLDNTIKLWDVKTGKCIRTQFGHVEG--VWDIAADNFRI-ISGSHDGSIKVWDLQS 581
Query: 620 GTPIRIYEIGR 630
G + + GR
Sbjct: 582 GKCMHTFN-GR 591
Score = 54 (24.1 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 576 DGSLVHSLTGHSASSYVLDVH-PFNPRIAMSAGYDGRTIVWDIWEGTPIR--------IY 626
DG+ S T + VLD + P+ P +S G D +WD+ G IR ++
Sbjct: 499 DGA-DESDTPSNEQETVLDENIPY-PTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVW 556
Query: 627 EIG--RFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGES-QKDAKYDQF-FLGD 677
+I F+++ G S DG+ V G+ ++T G Q++ ++ Q LGD
Sbjct: 557 DIAADNFRIISG--SHDGSIKVWDLQSGKC--MHTFNGRRLQRETQHTQTQSLGD 607
Score = 51 (23.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTG 585
VW + DN +++ D I VW+ G +H+ G
Sbjct: 555 VWDIAADNFRIISGSHDGSIKVWDLQSGKCMHTFNG 590
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 180 (68.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 43/133 (32%), Positives = 66/133 (49%)
Query: 232 KMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++++ K L+GH D V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 374 ELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS 431
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ N ++ S S D ++VW G I L GHT V + + +++S S
Sbjct: 432 SQMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSR 484
Query: 351 DGTCRIWDARYSQ 363
D T R+WD Q
Sbjct: 485 DATLRVWDIETGQ 497
Score = 173 (66.0 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 68/291 (23%), Positives = 121/291 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + +I+GS DR +K+W+ ET C+ + GH + + +
Sbjct: 419 LRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 476
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V S S D +RVW + G + VL GH AV + + R +++S + D +
Sbjct: 477 KR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-----RVVSGAYDFMVK 529
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
+WD ++ R+Y + ++G L HQ L
Sbjct: 530 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 589
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVA 462
+ V+G++D+ ++W K+ Q + L + H++ V +QF+ V
Sbjct: 590 SGMELKDNILVSGNADSTVKIWDI-KTG-----QCLQTLQGPNKHQSAVTCLQFNKNFVI 643
Query: 463 SRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA-IIWIPRSRRSHGKV 512
+ S D + + K F N+VT GS ++W R R S+ K+
Sbjct: 644 TSS--DDGTVK--LWDLKTGEFIR-NLVTLESGGSGGVVW--RIRASNTKL 687
Score = 168 (64.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q + L GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 493 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 550
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + V S S D IRVW + G I L GH + + L+S +
Sbjct: 551 SLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 603
Query: 350 DDGTCRIWDARYSQYSPRIYLP-KPPDAIT 378
D T +IWD + Q + P K A+T
Sbjct: 604 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 633
Score = 90 (36.7 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 22/71 (30%), Positives = 37/71 (52%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ +H+LTGH + + +++ I +S D
Sbjct: 549 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNILVSGNAD 605
Query: 610 GRTIVWDIWEG 620
+WDI G
Sbjct: 606 STVKIWDIKTG 616
Score = 84 (34.6 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V++ D + VW+ + +H+L GH+ Y L F+ +S D VW
Sbjct: 515 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSGSLDTSIRVW 571
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV-LSDDVGQIYLLNTGQ 661
D+ G I G L G D + +D +I+ + TGQ
Sbjct: 572 DVETGNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 617
Score = 69 (29.3 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L + +++ D + +W+ G + +L G + + FN +++ DG +
Sbjct: 594 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 653
Query: 615 WDIWEGTPIR 624
WD+ G IR
Sbjct: 654 WDLKTGEFIR 663
Score = 37 (18.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSL-TGHSASS--YVLDVHPFNPRIAMSAG 607
+ FV+ + D + +W+ G + +L T S S V + N ++ + G
Sbjct: 638 NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG 692
>UNIPROTKB|G4MRA1 [details] [associations]
symbol:MGG_04693 "WD repeat-containing protein 57"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001231
KO:K12857 RefSeq:XP_003710838.1 ProteinModelPortal:G4MRA1
EnsemblFungi:MGG_04693T0 GeneID:2678191 KEGG:mgr:MGG_04693
Uniprot:G4MRA1
Length = 352
Score = 187 (70.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 49/159 (30%), Positives = 76/159 (47%)
Query: 222 AIAKPSTMVQKMQN-IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--L 278
A+ + + + +Q + +L GH ++CA F+ +G+++ +GS DR + +W C
Sbjct: 38 ALIQAAPRLSSLQAPLMELSGHSGEIFCAKFNSAGQYIASGSMDRSILLWRAN-GDCENY 96
Query: 279 ASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPR 338
GH G I DL S ++ ++ SAS D + W L G I GH + ++ S R
Sbjct: 97 GILSGHRGAILDLQWSRDSDIIFSASADMHLASWDLTTGERIRRYVGHEEVINSLDISKR 156
Query: 339 PSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAI 377
I L S SDDGT IWD R + I P A+
Sbjct: 157 GEEI--LFSGSDDGTIGIWDPRKKHAADYIESDFPVTAV 193
Score = 120 (47.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 33/128 (25%), Positives = 56/128 (43%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVI-TGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ I++ GH + + + G ++ +GSDD + IW A + +T +A
Sbjct: 136 ERIRRYVGHEEVINSLDISKRGEEILFSGSDDGTIGIWDPRKKHA-ADYIESDFPVTAVA 194
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+S + S D I+VW + + + GH +T + SP + LLS + D
Sbjct: 195 ISEAGNEIYSGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQS---LLSYAMDS 251
Query: 353 TCRIWDAR 360
T R WD R
Sbjct: 252 TARTWDIR 259
Score = 70 (29.7 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 14/65 (21%), Positives = 28/65 (43%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
W + + V D + +W+ G L + L GH A+ ++ P + +S D
Sbjct: 287 WDKEGKRVAMGAADGTVVIWSNETGKLTYKLPGHKAAVNCVEFSPGTEPLILSGSSDKTL 346
Query: 613 IVWDI 617
+V ++
Sbjct: 347 LVGEL 351
Score = 68 (29.0 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 565 MDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTP-- 622
+D I VW+ ++V+++ GH + L V P + + +S D WDI P
Sbjct: 207 IDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSL-LSYAMDSTARTWDIRPFAPTE 265
Query: 623 --IRIYE---IGRFK-LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
IR ++ +G K LV G + +G + + G + + + G+
Sbjct: 266 RHIRTFDGAPMGIEKNLVRGGWDKEGKRVAMGAADGTVVIWSNETGK 312
Score = 42 (19.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 605 SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV 646
S G D VWD+ + + R + K SPD S++
Sbjct: 204 SGGIDNDIKVWDVRKKAVVYNMAGHRDTITTLKVSPDSQSLL 245
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 444 LSGHENDVNYVQFS-GCAVASRSAMSD 469
L GH+ VN V+FS G S SD
Sbjct: 317 LPGHKAAVNCVEFSPGTEPLILSGSSD 343
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 168 (64.2 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 44/132 (33%), Positives = 69/132 (52%)
Query: 227 STMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEG 286
ST QK + L H + V CA F GR +++ SDD+ VK+W + C+ S H G
Sbjct: 162 STHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 219
Query: 287 DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+T + + T VA+A D ++VW + + + H+ AV A++F PS Y L+
Sbjct: 220 FVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF--HPSGNY-LV 276
Query: 347 SSSDDGTCRIWD 358
++S D T +I D
Sbjct: 277 TASSDSTLKILD 288
Score = 159 (61.0 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 66/249 (26%), Positives = 97/249 (38%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ GH+DAV C F SG + +GS D+ V+IW R H + + S+
Sbjct: 87 RFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDG 146
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+AS+D I+VW + L H V FSP I +S+SDD T ++W
Sbjct: 147 QSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI---VSASDDKTVKLW 203
Query: 358 D--AR-----YSQYSPRI-YLPKPPD----AITGKXXXXXXXXXXXXXXLQSHQILCCAY 405
D +R Y ++ + Y+ P A G LQ +Q+ A
Sbjct: 204 DKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 263
Query: 406 NA-----NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCA 460
NA +G VT SSD+ ++ + + L L GH+ V FS
Sbjct: 264 NALSFHPSGNYLVTASSDSTLKILDLMEGRL---------LYTLHGHQGPATTVAFSRTG 314
Query: 461 VASRSAMSD 469
S SD
Sbjct: 315 EYFASGGSD 323
Score = 155 (59.6 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 38/129 (29%), Positives = 65/129 (50%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GHRDAV C F + + + +GS D + +W M+ GH+ +T + S +
Sbjct: 44 RHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 103
Query: 297 NTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
L+AS S D +R+W +P+ S V R HT V ++ F S +++SDD T +
Sbjct: 104 GHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFC---SDGQSFVTASDDKTIK 159
Query: 356 IWDARYSQY 364
+W ++
Sbjct: 160 VWSTHRQKF 168
Score = 106 (42.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 27/110 (24%), Positives = 49/110 (44%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++A D + +W+ VHS H +D HP +A +AG D
Sbjct: 184 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVA-AAGMDNTV 242
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWD+ ++ Y++ + F P G +V + + +L+ +G
Sbjct: 243 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 292
Score = 60 (26.2 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + +++ A D + + + ++G L+++L GH + + A S G
Sbjct: 263 VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 321
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 322 SDEQVMVW 329
Score = 45 (20.9 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 11/15 (73%), Positives = 11/15 (73%)
Query: 637 KFSPDGTSIV-LSDD 650
KFSPDG IV SDD
Sbjct: 183 KFSPDGRLIVSASDD 197
Score = 37 (18.1 bits), Expect = 9.6e-07, Sum P(3) = 9.6e-07
Identities = 7/49 (14%), Positives = 22/49 (44%)
Query: 1416 SWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSING 1464
++L+ + + + + + ++Y+ GHQ + G +++ G
Sbjct: 273 NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 321
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 202 (76.2 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 43/123 (34%), Positives = 65/123 (52%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L GH D V +F R + + SDD VKIW T + H+ + + S +
Sbjct: 467 RTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHD 526
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ASAS+D +++W G + L GH V +++FSP S + L S+SDDGT +I
Sbjct: 527 SRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRL--LASASDDGTVKI 583
Query: 357 WDA 359
W A
Sbjct: 584 WYA 586
Score = 200 (75.5 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 61/250 (24%), Positives = 107/250 (42%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V +F R + +GS+DR V+IW T + HE + ++ + +
Sbjct: 341 RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD 400
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ +ASAS+ +++W G +VL GH V +++FSP S + L S+SDD T +I
Sbjct: 401 SRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP-DSRL--LASASDDRTVKI 457
Query: 357 WDAR----------YSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXX-----LQSHQ-- 399
W A ++ + + I L+SH
Sbjct: 458 WHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNW 517
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+ ++ + + + S D ++W S+E++ L GH++ VN V FS
Sbjct: 518 VRSVVFSHDSRLLASASDDMTVKIWDTATGSLENT---------LEGHDDRVNSVSFSPD 568
Query: 460 AVASRSAMSD 469
+ SA D
Sbjct: 569 SRLLASASDD 578
Score = 195 (73.7 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 44/133 (33%), Positives = 64/133 (48%)
Query: 228 TMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD 287
T +QN L GH + V +F R + + SDD VKIW T +GH
Sbjct: 292 TATSFLQNT--LEGHNEWVKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDS 349
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+ + S ++ L+AS SND +R+W GL H +V A++F+ S +L S
Sbjct: 350 VRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFA-HDSR--RLAS 406
Query: 348 SSDDGTCRIWDAR 360
+SD G +IWD R
Sbjct: 407 ASDGGNVKIWDTR 419
Score = 184 (69.8 bits), Expect = 1.5e-10, Sum P(4) = 1.5e-10
Identities = 45/132 (34%), Positives = 67/132 (50%)
Query: 228 TMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD 287
T +QN+ L GH D V F R + + SDDR VKIW T + GH
Sbjct: 418 TRTGSLQNV--LEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDW 475
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPI-SVLRGHTGAVTAIAFSPRPSAIYQLL 346
+ + S ++ L+ASAS+D +++W +P+ + L H V ++ FS S + L
Sbjct: 476 VRSVVFSHDSRLIASASDDMTVKIWDTAT-VPLQNNLESHDNWVRSVVFS-HDSRL--LA 531
Query: 347 SSSDDGTCRIWD 358
S+SDD T +IWD
Sbjct: 532 SASDDMTVKIWD 543
Score = 175 (66.7 bits), Expect = 2.0e-11, Sum P(4) = 2.0e-11
Identities = 39/121 (32%), Positives = 63/121 (52%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ +GH AV F R + + S D VKIW T+F + GH + + S ++
Sbjct: 258 QFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDS 317
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
L+ASAS+D +++W G +L+GH +V ++ FS S + + S S+D T RIW
Sbjct: 318 RLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFS-HDSRL--IASGSNDRTVRIW 374
Query: 358 D 358
+
Sbjct: 375 E 375
Score = 170 (64.9 bits), Expect = 3.6e-06, Sum P(3) = 3.6e-06
Identities = 42/136 (30%), Positives = 64/136 (47%)
Query: 228 TMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD 287
T +QN L H + V +F R + + SDD VKIW T + GH+
Sbjct: 502 TATVPLQN--NLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR 559
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
+ ++ S ++ L+ASAS+D +++W G G ++AFS + L S
Sbjct: 560 VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNL---LAS 616
Query: 348 SSDDGTCRIWDAR-YS 362
+ DDGT +IWD YS
Sbjct: 617 AMDDGTVKIWDMEIYS 632
Score = 140 (54.3 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 39/141 (27%), Positives = 71/141 (50%)
Query: 223 IAKPSTMVQKMQNIKKLRGHR--DAVYCAIFDRSGRFV---ITGSDDRLVKIWSMETAFC 277
I + ++ + MQ +++ R D + + S RF I+G +++++ F
Sbjct: 196 IQETASALSSMQRLERFIRKRSSDIDLLDVVEDSYRFALWNISGIKCAPLQVYASALLFS 255
Query: 278 LASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
A +GH+ + ++ S ++ L+ASAS D +++W + L GH V ++ FS
Sbjct: 256 PAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFS- 314
Query: 338 RPSAIYQLLSSSDDGTCRIWD 358
S + L S+SDDGT +IWD
Sbjct: 315 HDSRL--LASASDDGTVKIWD 333
Score = 102 (41.0 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 30/120 (25%), Positives = 51/120 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +V+S D+R + + D + +W G L H+ H S + + R+A SA
Sbjct: 350 VRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLA-SAS 408
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
G +WD G+ + E G V+ FSPD + + D + + + G Q+
Sbjct: 409 DGGNVKIWDTRTGSLQNVLE-GHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQR 467
Score = 96 (38.9 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +V+S D+R + +A D + +W+ GSL ++L GH + P + R+ SA
Sbjct: 518 VRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSP-DSRLLASAS 576
Query: 608 YDGRTIVWDIWEGT 621
DG +W GT
Sbjct: 577 DDGTVKIWYAATGT 590
Score = 89 (36.4 bits), Expect = 8.8e-13, Sum P(4) = 8.8e-13
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV-HPFNPRIAMSA 606
VN + +S D+R + +A D + +W+A GSL +L GH+ +V V + R+ SA
Sbjct: 434 VNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHN--DWVRSVVFSHDSRLIASA 491
Query: 607 GYDGRTIVWD 616
D +WD
Sbjct: 492 SDDMTVKIWD 501
Score = 78 (32.5 bits), Expect = 3.4e-12, Sum P(4) = 3.4e-12
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV-HPFNPRIAMSA 606
VN + +S D+R + +A D + +W A G++ H+ G + L H N + SA
Sbjct: 560 VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSN--LLASA 617
Query: 607 GYDGRTIVWDI 617
DG +WD+
Sbjct: 618 MDDGTVKIWDM 628
Score = 67 (28.6 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 31/107 (28%), Positives = 48/107 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + ++ D+R + +A + +W+ GSL + L GH + P + R+ SA
Sbjct: 392 VMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSP-DSRLLASAS 450
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSIV-LSDDV 651
D RT+ +W G+ R E G V FS D I SDD+
Sbjct: 451 -DDRTVKIWHAATGSLQRTLE-GHNDWVRSVVFSHDSRLIASASDDM 495
Score = 49 (22.3 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 1250 EGNLMSEVP-EEAEGYGRSSSDQLLNSNLKFKVRDGSK 1286
EG+ VP EA +GR++ ++L FKV K
Sbjct: 943 EGDKAGRVPLHEAAAHGRNAVIEILLGKSSFKVAQRDK 980
Score = 41 (19.5 bits), Expect = 1.8e-13, Sum P(4) = 1.8e-13
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 1661 IRLRLVNNYYRSLEAAKD 1678
IR L YY +LE+ KD
Sbjct: 1372 IRRSLDQYYYHALESTKD 1389
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 179 (68.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 43/132 (32%), Positives = 65/132 (49%)
Query: 233 MQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+++ K L+GH D V C F G +++GSDD +K+WS T CL + GH G +
Sbjct: 423 LKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 480
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+ N ++ S S D ++VW G I L GHT V + + +++S S D
Sbjct: 481 QMRDN--IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK-----RVVSGSRD 533
Query: 352 GTCRIWDARYSQ 363
T R+WD Q
Sbjct: 534 ATLRVWDIETGQ 545
Score = 170 (64.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 66/291 (22%), Positives = 119/291 (40%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + +I+GS DR +K+W+ ET C+ + GH + + +
Sbjct: 467 LRTLVGHTGGVWSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE 524
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V S S D +RVW + G + VL GH AV + + R +++S + D +
Sbjct: 525 KR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGR-----RVVSGAYDFMVK 577
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
+WD ++ R+Y + ++G L HQ L
Sbjct: 578 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT 637
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVA 462
+ V+G++D+ ++W + Q H+ H++ V +QF+ V
Sbjct: 638 SGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHK------HQSAVTCLQFNKNFVI 691
Query: 463 SRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA-IIWIPRSRRSHGKV 512
+ S D + + + F N+VT GS ++W R R S+ K+
Sbjct: 692 TSS--DDGTVK--LWDLRTGEFIR-NLVTLESGGSGGVVW--RIRASNTKL 735
Score = 168 (64.2 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/150 (32%), Positives = 70/150 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q + L GH AV C +D GR V++G+ D +VK+W ET CL + +GH +
Sbjct: 541 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 598
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + V S S D IRVW + G I L GH + + L+S +
Sbjct: 599 SLQFDGIH--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNI-----LVSGN 651
Query: 350 DDGTCRIWDARYSQYSPRIYLP-KPPDAIT 378
D T +IWD + Q + P K A+T
Sbjct: 652 ADSTVKIWDIKTGQCLQTLQGPHKHQSAVT 681
Score = 91 (37.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 31/116 (26%), Positives = 54/116 (46%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ +H+LTGH + + +++ I +S D
Sbjct: 597 VYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL---KDNILVSGNAD 653
Query: 610 GRTIVWDIWEGTPIRIYEIGRFKLVDGK--FSPDGTSIVLSDDVGQIYL--LNTGQ 661
+WDI G ++ + G K + ++ S D G + L L TG+
Sbjct: 654 STVKIWDIKTGQCLQTLQ-GPHKHQSAVTCLQFNKNFVITSSDDGTVKLWDLRTGE 708
Score = 84 (34.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 29/107 (27%), Positives = 45/107 (42%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V++ D + VW+ + +H+L GH+ Y L F+ +S D VW
Sbjct: 563 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ---FDGIHVVSGSLDTSIRVW 619
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV-LSDDVGQIYLLNTGQ 661
D+ G I G L G D + +D +I+ + TGQ
Sbjct: 620 DVETGNCIHTLT-GHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 665
Score = 70 (29.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTG-HSASSYVLDVHPFNPRIAMSAGYDGRTI 613
L + +++ D + +W+ G + +L G H S V + FN +++ DG
Sbjct: 642 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAVTCLQ-FNKNFVITSSDDGTVK 700
Query: 614 VWDIWEGTPIR 624
+WD+ G IR
Sbjct: 701 LWDLRTGEFIR 711
>UNIPROTKB|F1SQT5 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] [GO:0042981
"regulation of apoptotic process" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 OMA:KVCKNSA InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:FP102239 EMBL:CU633605
RefSeq:XP_003481790.1 Ensembl:ENSSSCT00000000968
Ensembl:ENSSSCT00000033603 GeneID:100513283 KEGG:ssc:100513283
Uniprot:F1SQT5
Length = 1249
Score = 179 (68.1 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 40/129 (31%), Positives = 66/129 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DL 291
+ + +++ H D V C F RF+ T S D+ VKIW+ T + S H +
Sbjct: 648 EKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHF 707
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+SN+ L+A+ S+D+ +++W L + + GHT +V+ FSP L S S D
Sbjct: 708 TNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKL---LASCSAD 764
Query: 352 GTCRIWDAR 360
GT ++WD +
Sbjct: 765 GTLKLWDVK 773
Score = 137 (53.3 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 32/130 (24%), Positives = 64/130 (49%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ ++N+ +L R H DAVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 601 KNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV 660
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A S+++ +A+ S D +++W G + H+ V F+ + + L +
Sbjct: 661 LCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLL-LATG 719
Query: 349 SDDGTCRIWD 358
S D ++WD
Sbjct: 720 SSDYFLKLWD 729
Score = 130 (50.8 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 35/133 (26%), Positives = 62/133 (46%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + G ++ + ++++ ++++ T LA GH I S +N L A
Sbjct: 801 VKCCSWSADGASLVVAAKNKVL-LFNIHTGGLLAEIHTGHHSTIQYCDFSPSNHLAVVAL 859
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQY 364
+ + + +W + L ++ RGH V FSP S+ L+SSDD T R+W+ +
Sbjct: 860 SQYCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSSF---LTSSDDETIRLWETKKVCK 916
Query: 365 SPRIYLPKPPDAI 377
+ I L K D +
Sbjct: 917 NSAIVLNKKIDVV 929
Score = 112 (44.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 31/116 (26%), Positives = 56/116 (48%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H++ V F G+ VI+ SDD +++W+ ++ + S + H+ + D + N+ L+
Sbjct: 1002 HKNTVRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQETVKDFRLLKNSRLL- 1059
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H V + SP + + S+S D T +IW
Sbjct: 1060 SWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDAT---KFSSTSADKTAKIW 1112
Score = 96 (38.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 20/73 (27%), Positives = 35/73 (47%)
Query: 241 GHRDAV-YCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + YC F S + V++W+M++ +A CRGH + S + +
Sbjct: 838 GHHSTIQYCD-FSPSNHLAVVALSQYCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSS 896
Query: 300 VASASNDFVIRVW 312
++S+D IR+W
Sbjct: 897 FLTSSDDETIRLW 909
Score = 96 (38.9 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 37/147 (25%), Positives = 62/147 (42%)
Query: 213 APSVCSACYAIAKPSTMVQKMQNIKKL---RGHRDAVYCAIFDRSGRFVITGSDDRLVKI 269
+PS A A+++ + M + K+ RGH V+CA+F G +T SDD +++
Sbjct: 849 SPSNHLAVVALSQYCVELWNMDSCLKVADCRGHLSWVHCAMFSPDGSSFLTSSDDETIRL 908
Query: 270 WSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA 329
W + C S I D+ N +V + N IR ++ +G +
Sbjct: 909 WETKKV-CKNSAIVLNKKI-DVVFQENEVMVLAVDN---IRRLQVINGKTGQIDYLTEAQ 963
Query: 330 VTAIAFSPRPSAIYQLLSSSDDGTCRI 356
V+ SP + L SDDG ++
Sbjct: 964 VSCCCLSPH---LQYLAFGSDDGAIQV 987
Score = 88 (36.0 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHS-----LTGHSAS--SYVLDVHPFNP 600
V +S+D+ + + I +WN +G L+HS + G +A+ +V D+ F+P
Sbjct: 1130 VRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGWVTDLR-FSP 1188
Query: 601 --RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
++ +SAG G W++ G I+ + L SPD + V D++G +Y+L
Sbjct: 1189 DGKMLVSAG--GYLKWWNVDSGKSIQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYVL 1245
Score = 85 (35.0 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 28/111 (25%), Positives = 46/111 (41%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L N +L+ D + VWN + G + H + D+ P + + S D +
Sbjct: 1053 LKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKI 1111
Query: 615 WDIWEGTPIRIYEIGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W +P+ +E+ K + FS D T + DD G+I + N GE
Sbjct: 1112 WSFDLLSPL--HELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGE 1160
Score = 73 (30.8 bits), Expect = 6.6e-12, Sum P(3) = 6.6e-12
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-NPRIAMSA 606
V I ++ D + V+++ D I VWN V SL H + V D N R+ +S
Sbjct: 1006 VRHIQFTTDGKNVISSSDDSAIQVWNWQSEETV-SLQAHQET--VKDFRLLKNSRL-LSW 1061
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
+DG VW+I G + + + ++ SPD T S +D +I+
Sbjct: 1062 SFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1112
Score = 59 (25.8 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHE-LDVLSGHENDV 451
C ++ +G+ F+T S D R+W K ++S +++ +DV+ EN+V
Sbjct: 887 CAMFSPDGSSFLTSSDDETIRLWET-KKVCKNSAIVLNKKIDVVF-QENEV 935
Score = 47 (21.6 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 637 KFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDS 685
+F+ DG +++ S D I + N Q E + Q + D+R L+++S
Sbjct: 1010 QFTTDGKNVISSSDDSAIQVWNW-QSEETVSLQAHQETVKDFR-LLKNS 1056
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 163 (62.4 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 38/120 (31%), Positives = 63/120 (52%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L H + V CA F GR +++ SDD+ VK+W + C+ S H G +T + + T
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGT 200
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+A D ++VW + + + H+ AV ++F PS Y L+++S D T +I D
Sbjct: 201 CIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF--HPSGNY-LITASSDSTLKILD 257
Score = 155 (59.6 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 38/122 (31%), Positives = 63/122 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GHRDAV C F + + + +GS D + +W M+ GH+ +T + S +
Sbjct: 13 RHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPS 72
Query: 297 NTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
L+AS S D +R+W +P+ S V R HT V ++ F S +++SDD T +
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SDGQSFVTASDDKTVK 128
Query: 356 IW 357
+W
Sbjct: 129 VW 130
Score = 140 (54.3 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 52/213 (24%), Positives = 79/213 (37%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
R H V F G+ +T SDD+ VK+W+ L S H + S + L
Sbjct: 100 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 159
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+ SAS+D +++W + H G VT + F P + I ++ D T ++WD
Sbjct: 160 IVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCI---AAAGMDNTVKVWDV 216
Query: 360 R-------YSQYSPRI----YLPKPPDAITGKXXXXXXXXXXXXX----XLQSHQ--ILC 402
R Y +S + + P IT L HQ
Sbjct: 217 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 276
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSE 435
A++ G F +G SD VW + V+ E
Sbjct: 277 VAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGE 309
Score = 124 (48.7 bits), Expect = 0.00055, P = 0.00055
Identities = 31/126 (24%), Positives = 54/126 (42%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIR 310
F SG + D VK+W + T L + H + L+ + + +AS+D ++
Sbjct: 195 FHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLK 254
Query: 311 VWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYS--QYSPRI 368
+ L +G + L GH G T +AFS R + S D +W + + +
Sbjct: 255 ILDLMEGRLLYTLHGHQGPATTVAFS-RTGEYFA--SGGSDEQVMVWKSNFDIVDHGEVT 311
Query: 369 YLPKPP 374
+P+PP
Sbjct: 312 KVPRPP 317
Score = 107 (42.7 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 29/111 (26%), Positives = 51/111 (45%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++A D + +W+ VHS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWD+ ++ Y++ V+G F P G ++ + + +L+ +G
Sbjct: 212 KVWDVRTHRLLQHYQL-HSAAVNGLSFHPSGNYLITASSDSTLKILDLMEG 261
Score = 59 (25.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + +++ A D + + + ++G L+++L GH + + A S G
Sbjct: 232 VNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 11/15 (73%), Positives = 11/15 (73%)
Query: 637 KFSPDGTSIV-LSDD 650
KFSPDG IV SDD
Sbjct: 152 KFSPDGRLIVSASDD 166
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 7/49 (14%), Positives = 22/49 (44%)
Query: 1416 SWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSING 1464
++L+ + + + + + ++Y+ GHQ + G +++ G
Sbjct: 242 NYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 177 (67.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 176
Query: 354 CRIWDAR 360
++WD R
Sbjct: 177 VKLWDIR 183
Score = 162 (62.1 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAIQTFQNTYQVLA 199
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 256
Query: 351 DGTCRIWDARYSQYSPR 367
D T R+WD R ++P+
Sbjct: 257 DNTVRVWDVR--PFAPK 271
Score = 128 (50.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + I + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 218 IKVWDLRQNKLTYTMRGHA----DSVTG 241
Score = 83 (34.3 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + A D + VW+ +++ L GH+ S + HP P I +SA D R
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 613 IVWDI 617
+ +I
Sbjct: 353 YMGEI 357
Score = 75 (31.5 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 26/108 (24%), Positives = 50/108 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 267
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P +RI++ + F+ L+ +SPDG+ I +Y+ +T
Sbjct: 268 FAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 65 (27.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L C+++ +G+ GS+D F VW + L L GH +N V F
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI---------LYKLPGHAGSINEVAFHPD 339
Query: 460 AVASRSAMSD 469
SA SD
Sbjct: 340 EPIILSASSD 349
Score = 39 (18.8 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 177 (67.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 176
Query: 354 CRIWDAR 360
++WD R
Sbjct: 177 VKLWDIR 183
Score = 162 (62.1 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAIQTFQNTYQVLA 199
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 256
Query: 351 DGTCRIWDARYSQYSPR 367
D T R+WD R ++P+
Sbjct: 257 DNTVRVWDVR--PFAPK 271
Score = 128 (50.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + I + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 218 IKVWDLRQNKLTYTMRGHA----DSVTG 241
Score = 83 (34.3 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + A D + VW+ +++ L GH+ S + HP P I +SA D R
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 613 IVWDI 617
+ +I
Sbjct: 353 YMGEI 357
Score = 72 (30.4 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 267
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P ++I++ + F+ L+ +SPDG+ I +Y+ +T
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 65 (27.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L C+++ +G+ GS+D F VW + L L GH +N V F
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI---------LYKLPGHAGSINEVAFHPD 339
Query: 460 AVASRSAMSD 469
SA SD
Sbjct: 340 EPIILSASSD 349
Score = 39 (18.8 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 177 (67.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 176
Query: 354 CRIWDAR 360
++WD R
Sbjct: 177 VKLWDIR 183
Score = 162 (62.1 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAIQTFQNTYQVLA 199
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 256
Query: 351 DGTCRIWDARYSQYSPR 367
D T R+WD R ++P+
Sbjct: 257 DNTVRVWDVR--PFAPK 271
Score = 128 (50.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + I + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 218 IKVWDLRQNKLTYTMRGHA----DSVTG 241
Score = 83 (34.3 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + A D + VW+ +++ L GH+ S + HP P I +SA D R
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 613 IVWDI 617
+ +I
Sbjct: 353 YMGEI 357
Score = 72 (30.4 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 267
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P ++I++ + F+ L+ +SPDG+ I +Y+ +T
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 65 (27.9 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L C+++ +G+ GS+D F VW + L L GH +N V F
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI---------LYKLPGHAGSINEVAFHPD 339
Query: 460 AVASRSAMSD 469
SA SD
Sbjct: 340 EPIILSASSD 349
Score = 39 (18.8 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 177 (67.4 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 176
Query: 354 CRIWDAR 360
++WD R
Sbjct: 177 VKLWDIR 183
Score = 162 (62.1 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAVQTFQNTYQVLA 199
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 256
Query: 351 DGTCRIWDARYSQYSPR 367
D T R+WD R ++P+
Sbjct: 257 DNTVRVWDVR--PFAPK 271
Score = 127 (49.8 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 35/148 (23%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + + + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 218 IKVWDLRQNKLTYTMRGHA----DSVTG 241
Score = 82 (33.9 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + A D + VW+ +++ L GH+ S + HP P I +SA D R
Sbjct: 294 WSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEP-IILSASSDKRL 352
Query: 613 IVWDI 617
+ +I
Sbjct: 353 YMGEI 357
Score = 72 (30.4 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 267
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P ++I++ + F+ L+ +SPDG+ I +Y+ +T
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Score = 66 (28.3 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 21/70 (30%), Positives = 29/70 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L C+++ +G+ GS+D F VW V L L GH +N V F
Sbjct: 289 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRV---------LYKLPGHAGSINEVAFHPD 339
Query: 460 AVASRSAMSD 469
SA SD
Sbjct: 340 EPIILSASSD 349
Score = 40 (19.1 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQIISG 212
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 165 (63.1 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 35/103 (33%), Positives = 55/103 (53%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 102 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 160
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
+ +ASA++D +++W L G +S GHTG V + F P
Sbjct: 161 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
Score = 158 (60.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 54 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 113
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 114 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 170
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 171 DDHTVKLWD 179
Score = 154 (59.3 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 17 VEEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 76
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 77 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 133
Query: 355 RIWDAR 360
++WD R
Sbjct: 134 KLWDIR 139
Score = 64 (27.6 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHP 597
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP
Sbjct: 154 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP 203
Score = 57 (25.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 123 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 180
Query: 618 WEG 620
G
Sbjct: 181 TAG 183
Score = 46 (21.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHE--LDVLSGHEND 450
S + C ++ +G + + D ++W + SE P H ++V+ H N+
Sbjct: 151 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMM-SEFPGHTGPVNVVEFHPNE 205
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 211 (79.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 64/242 (26%), Positives = 112/242 (46%)
Query: 234 QNIKKLRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ + L GHR+ VY F+ G + TGS D+ K+WS+ET C + RGH +I L+
Sbjct: 125 EELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ +TLVA+ S D ++W + +G + LRGH+ + +++F+ I ++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRI---ITGSFDH 241
Query: 353 TCRIWDA-----------RYSQYSPRIYLPKPPDAITGKXXXX----XXXXXXXXXXLQS 397
T +WDA ++ S + +TG L
Sbjct: 242 TVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTG 301
Query: 398 H--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
H +IL ++ G + T S+D AR++SA + + I +L+ GHE +++ +
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAA------TRKCIAKLE---GHEGEISKIS 352
Query: 456 FS 457
F+
Sbjct: 353 FN 354
Score = 200 (75.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 39/122 (31%), Positives = 66/122 (54%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ L GH D + + FD +G+ + T S D +I+S T C+A GHEG+I+ ++ +
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNP 355
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ + S+D R+W G + VL GHT + + AF+ + + + ++ S D TCR
Sbjct: 356 QGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIV---ITGSKDNTCR 412
Query: 356 IW 357
IW
Sbjct: 413 IW 414
Score = 189 (71.6 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 42/130 (32%), Positives = 67/130 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + L GH + A F+ ++TGS D+ K+W C+A+ GH+ +I D
Sbjct: 252 RKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCF 311
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
L+A+AS D R++ I+ L GH G ++ I+F+P+ + LL+ S D T
Sbjct: 312 DYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN---HLLTGSSDKT 368
Query: 354 CRIWDARYSQ 363
RIWDA+ Q
Sbjct: 369 ARIWDAQTGQ 378
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 56/230 (24%), Positives = 95/230 (41%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
RGH + C F+ V TGS D K+W ++ + + RGH +I L+ +++
Sbjct: 174 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDR 233
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ-------LLSSSDDG 352
+ + S D + VW G +++L GH +++ +F+ S I L + +G
Sbjct: 234 IITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNG 293
Query: 353 TC---------RIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQ--IL 401
C I D+ + Y+ ++ D G L+ H+ I
Sbjct: 294 KCVATLTGHDDEILDSCFD-YTGKLIATASAD---GTARIFSAATRKCIAKLEGHEGEIS 349
Query: 402 CCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
++N G +TGSSD AR+W A Q L VL GH +++
Sbjct: 350 KISFNPQGNHLLTGSSDKTARIWDA---------QTGQCLQVLEGHTDEI 390
Score = 147 (56.8 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 57/252 (22%), Positives = 106/252 (42%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K L+ H + ++SG ITGS DR K+W + L + GH + A++ N
Sbjct: 86 KVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVV--YAIAFN 143
Query: 297 NTL---VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
N +A+ S D ++W + G RGHT + ++F+P+ + + + S D T
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLV---ATGSMDTT 200
Query: 354 CRIWDARYSQ-------YSPRI----YLPKPPDAITGKXXXXX----XXXXXXXXXLQSH 398
++WD + + +S I + ITG L H
Sbjct: 201 AKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGH 260
Query: 399 --QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV--NYV 454
+I ++N + ++ +TGS D ++W A + L+GH++++ +
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNGKC---------VATLTGHDDEILDSCF 311
Query: 455 QFSGCAVASRSA 466
++G +A+ SA
Sbjct: 312 DYTGKLIATASA 323
Score = 136 (52.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I KL GH + F+ G ++TGS D+ +IW +T CL GH +I A +
Sbjct: 338 IAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 296 NNTLVASASNDFVIRVWR 313
+V + S D R+WR
Sbjct: 398 KGNIVITGSKDNTCRIWR 415
Score = 116 (45.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 47/220 (21%), Positives = 91/220 (41%)
Query: 271 SMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAV 330
S T + + H +T++A++ + + + S D ++W G ++ L GH V
Sbjct: 78 SNHTFYLFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVV 137
Query: 331 TAIAFSPRPSAIYQLLSSSDDGTCRIWDAR-------YSQYSPRI----YLPKPPDAITG 379
AIAF+ P ++ + S D TC++W + ++ I + P+ TG
Sbjct: 138 YAIAFN-NPYGD-KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATG 195
Query: 380 KXXXXXXX----XXXXXXXLQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVED 433
L+ H +I+ ++N +G +TGS D VW A D
Sbjct: 196 SMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDA------D 249
Query: 434 SEQPIHELDVLSGHENDVNYVQFS-GCAVASRSAMSDAFK 472
+ + ++ +L GH +++ F+ C++ +M K
Sbjct: 250 TGRKVN---ILIGHCAEISSASFNWDCSLILTGSMDKTCK 286
Score = 85 (35.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 30/122 (24%), Positives = 51/122 (41%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD-VHPFNPRIAMSAGYDGRTIV 614
D +L MD +W+A +G V +LTGH +LD + ++ +A DG +
Sbjct: 272 DCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE--ILDSCFDYTGKLIATASADGTARI 329
Query: 615 WDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVL--SDDVGQIYLLNTGQGESQKDAKYDQ 672
+ I E ++ F+P G ++ SD +I+ TGQ + D+
Sbjct: 330 FSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDE 389
Query: 673 FF 674
F
Sbjct: 390 IF 391
Score = 46 (21.3 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 12/68 (17%), Positives = 27/68 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ I ++ +L D +W+A G + L GH+ + + + I ++
Sbjct: 348 ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFN-YKGNIVITGS 406
Query: 608 YDGRTIVW 615
D +W
Sbjct: 407 KDNTCRIW 414
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 172 (65.6 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + +IT S D +W +ET
Sbjct: 19 NICSI-YSL---KTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIET 73
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
GH GD+ L+++ + S + D I++W + D + GH + A+A
Sbjct: 74 GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVA 133
Query: 335 FSPRPSAIYQLLSSSDDGTCRIWDARYSQ 363
F P Y + SDD TCR++D R Q
Sbjct: 134 FFPNG---YAFTTGSDDATCRLFDLRADQ 159
Score = 137 (53.3 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V GR ++G+ D +K+W + + C + GHE DI +A N
Sbjct: 82 GHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAF 141
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTG---AVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+ S+D R++ L + ++ H +T++AFS R + LL+ DD C IW
Sbjct: 142 TTGSDDATCRLFDLRADQEL-LMYSHDNIICGITSVAFS-RSGRL--LLAGYDDFNCNIW 197
Query: 358 DA 359
DA
Sbjct: 198 DA 199
Score = 60 (26.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D +W+A+ G L GH L V +A +
Sbjct: 173 ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 231
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 232 WDSFLKIWN 240
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 213 (80.0 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 65/247 (26%), Positives = 111/247 (44%)
Query: 203 IGGGFKKHH-RAPSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITG 261
I GF++ + R S+ + ++ K ST V+ +L H VY F +++++
Sbjct: 339 IACGFQESYIRLWSIKADKKSLPK-STSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSC 397
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
S+D ++WS++T L + +GH G + D+A A+AS+D ++W P+
Sbjct: 398 SEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLR 457
Query: 322 VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRIYL--PKP------ 373
V GH V + F P++ Y L SSD TCR+WD + +S R++ +P
Sbjct: 458 VFAGHLSDVDCVTF--HPNSAYVLTGSSDK-TCRLWDV-HRGHSVRVFNGHTQPVTAVAI 513
Query: 374 -PDAIT-------GKXXXXXXXXXXXXXXLQSHQ--ILCCAYNANGTVFVTGSSDTFARV 423
PD T G ++ H+ I +++ TV V+G SD R
Sbjct: 514 APDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRA 573
Query: 424 WSACKSS 430
W K++
Sbjct: 574 WDVFKTN 580
Score = 188 (71.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/130 (29%), Positives = 68/130 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ GH V C F + +V+TGS D+ ++W + + GH +T +A++
Sbjct: 456 LRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAP 515
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ +ASA ++ +I +W + G I +RGH G + +++FS R S + L+S D T R
Sbjct: 516 DGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFS-RESTV--LVSGGSDCTVR 572
Query: 356 IWDARYSQYS 365
WD + Y+
Sbjct: 573 AWDVFKTNYN 582
Score = 100 (40.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/135 (22%), Positives = 55/135 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET-------AFCLASCRG------HEGDITDLAVS 294
CA F + G + +++WS++ + + G H G + S
Sbjct: 329 CAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFS 388
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+N + S S D R+W + + +GHTG V +AF P + ++S D T
Sbjct: 389 PDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFG---HYFATASHDQTA 445
Query: 355 RIWDARYSQYSPRIY 369
++W + Y R++
Sbjct: 446 QLWSCDHI-YPLRVF 459
Score = 84 (34.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 22/83 (26%), Positives = 38/83 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGT 643
GH + + HP N ++ D +WD+ G +R++ G + V +PDG
Sbjct: 461 GHLSDVDCVTFHP-NSAYVLTGSSDKTCRLWDVHRGHSVRVFN-GHTQPVTAVAIAPDGH 518
Query: 644 SIVLSDDVGQIYLLNTGQGESQK 666
++ +D G I+L + G G K
Sbjct: 519 TMASADSEGLIHLWDIGTGRRIK 541
Score = 76 (31.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMS 605
V+ + + ++ +VL D CR+ W+ G V GH+ + + P +A S
Sbjct: 466 VDCVTFHPNSAYVLTGSSDKTCRL--WDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMA-S 522
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIV 646
A +G +WDI G I+ R + FS + T +V
Sbjct: 523 ADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLV 563
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 177 (67.4 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 175
Query: 354 CRIWDAR 360
++WD R
Sbjct: 176 VKLWDIR 182
Score = 162 (62.1 bits), Expect = 7.1e-12, Sum P(2) = 7.1e-12
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 142 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAIQTFQNTYQVLA 198
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 199 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 255
Query: 351 DGTCRIWDARYSQYSPR 367
D T R+WD R ++P+
Sbjct: 256 DNTVRVWDVR--PFAPK 270
Score = 128 (50.1 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 160
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + I + +T V A+ F+ Q++S D
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 216
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 217 IKVWDLRQNKLTYTMRGHA----DSVTG 240
Score = 82 (33.9 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + A D + VW+ +++ L GH+ S + HP P I +SA D R
Sbjct: 293 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IIISASSDKRL 351
Query: 613 IVWDI 617
+ +I
Sbjct: 352 YMGEI 356
Score = 72 (30.4 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D VWD+
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 266
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P ++I++ + F+ L+ +SPDG+ I +Y+ +T
Sbjct: 267 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Score = 64 (27.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L C+++ +G+ GS+D F VW + L L GH +N V F
Sbjct: 288 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI---------LYKLPGHAGSINEVAFHPD 338
Query: 460 AVASRSAMSD 469
SA SD
Sbjct: 339 EPIIISASSD 348
Score = 39 (18.8 bits), Expect = 2.9e-13, Sum P(3) = 2.9e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 211
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 189 (71.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 45/138 (32%), Positives = 76/138 (55%)
Query: 224 AKPSTMVQKMQNIK-KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR 282
+KP+ V+ +K L GH AV F +G ++ + S D+L+KIW +
Sbjct: 26 SKPAP-VKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
GH+ I+D+A SS++ L+ SAS+D +++W + G + L+GH+ V F+P+ + I
Sbjct: 85 GHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 144
Query: 343 YQLLSSSDDGTCRIWDAR 360
+S S D + RIWD +
Sbjct: 145 ---VSGSFDESVRIWDVK 159
Score = 184 (69.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 37/127 (29%), Positives = 66/127 (51%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K + GH+ + + +++ SDD+ +KIW + + CL + +GH + +
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ L+ S S D +R+W + G + L H+ V+A+ F+ R ++ ++SSS DG CRI
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN-RDGSL--IVSSSYDGLCRI 197
Query: 357 WDARYSQ 363
WD Q
Sbjct: 198 WDTASGQ 204
Score = 170 (64.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 37/129 (28%), Positives = 68/129 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH + V+C F+ +++GS D V+IW ++T CL + H ++ + +
Sbjct: 122 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 181
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +L+ S+S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 182 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI---LAATLDNTL 238
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 239 KLWD--YSK 245
Score = 118 (46.6 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 31/121 (25%), Positives = 59/121 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMS 605
++ + WS D+ +++A D + +W+ G + +L GHS +YV + FNP+ + +S
Sbjct: 90 ISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS--NYVFCCN-FNPQSNLIVS 146
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQ 665
+D +WD+ G ++ + F+ DG+ IV S G + +T G+
Sbjct: 147 GSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 206
Query: 666 K 666
K
Sbjct: 207 K 207
Score = 68 (29.0 bits), Expect = 7.3e-07, Sum P(3) = 7.3e-07
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRI 368
L GHT AV+++ FSP L SSS D +IW A ++ I
Sbjct: 41 LAGHTKAVSSVKFSPNGE---WLASSSADKLIKIWGAYDGKFEKTI 83
Score = 63 (27.2 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 14/72 (19%), Positives = 34/72 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++LAA +D + +W+ G + + T H Y + + + +S
Sbjct: 217 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVS 276
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 277 GSEDNLVYIWNL 288
Score = 58 (25.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++++ D + +WN +V L GH+ HP IA +A + +TI +W
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 330
Score = 58 (25.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 26/118 (22%), Positives = 52/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLTG--HSASSYVLDVHPFNPRIA 603
V+ + ++ D ++++ D CRI W+ G + +L + S+V P N +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRI--WDTASGQCLKTLIDDDNPPVSFV-KFSP-NGKYI 229
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTS-IVLSDDVGQIYLLN 658
++A D +WD +G ++ Y + + + FS G IV + +Y+ N
Sbjct: 230 LAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Score = 54 (24.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 1408 SNFPVRKLSWLMLSEHEEGYRYIPQLGD-EVIYSRQGHQEFIEST 1451
+NF V W++ S E+ YI L EV+ QGH + + ST
Sbjct: 264 ANFSVTGGKWIV-SGSEDNLVYIWNLQTKEVVQKLQGHTDVVIST 307
Score = 40 (19.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELD-VLSGHENDVNYVQFS--GCAVASRSA 466
T +S T + S+ S +P + L L+GH V+ V+FS G +AS SA
Sbjct: 10 TEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 186 (70.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 42/125 (33%), Positives = 60/125 (48%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ GH D + F SG+++ T S D+ ++W + T L GH + +A
Sbjct: 332 LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQ 391
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ L AS D + RVW L G I V +GH V ++ FSP Y L S +D CR
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG---YHLASGGEDNQCR 448
Query: 356 IWDAR 360
IWD R
Sbjct: 449 IWDLR 453
Score = 131 (51.2 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 39/157 (24%), Positives = 65/157 (41%)
Query: 204 GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSD 263
G F + + + CS + K M Q I L+ H++ +F + T S
Sbjct: 260 GCSFSRDGKILATCSLS-GVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASA 318
Query: 264 DRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVL 323
DR K+W + L + GH + +A + + + S D R+W + G + +
Sbjct: 319 DRTAKLWKTDGTL-LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQ 377
Query: 324 RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
GH+ +V IAF + A+ S D R+WD R
Sbjct: 378 EGHSRSVYGIAFQ-QDGAL--AASCGLDSLARVWDLR 411
Score = 77 (32.2 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
F+ A D ++ +W+ D SLV SL GH + LD+ + IA + +D RTI +W
Sbjct: 480 FLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIA-TVSHD-RTIKLW 535
Score = 47 (21.6 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 407 ANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDV 443
A+ + T S D ++W++ + ED E+ ++D+
Sbjct: 518 ADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDIDL 554
Score = 39 (18.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 405 YNANGTVFVTGSSDTFARVW 424
++ NG +G D R+W
Sbjct: 431 FSPNGYHLASGGEDNQCRIW 450
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 206 (77.6 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 62/242 (25%), Positives = 113/242 (46%)
Query: 234 QNIKKLRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ + L GHR+ VY F+ G + TGS D+ K+WS+ET C + RGH +I L+
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLS 184
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ +TLVA+ S D ++W + G + L GH+ + +++F+ + I ++ S D
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRI---ITGSFDH 241
Query: 353 TCRIWDAR-----YS------QYSPRIYLPKPPDAITGKXXXX----XXXXXXXXXXLQS 397
T +W+A Y+ + S ++ +TG L
Sbjct: 242 TVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTG 301
Query: 398 H--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
H +IL ++ G + T S+D AR++SA + + + +L+ GHE +++ +
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARIFSAA------TRECVTKLE---GHEGEISKIS 352
Query: 456 FS 457
F+
Sbjct: 353 FN 354
Score = 196 (74.1 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 39/122 (31%), Positives = 64/122 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ L GH D + + FD +G+ + T S D +I+S T C+ GHEG+I+ ++ +
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNP 355
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ + S+D R+W G + VL GHT + + AF+ + I ++ S D TCR
Sbjct: 356 QGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDII---ITGSKDNTCR 412
Query: 356 IW 357
IW
Sbjct: 413 IW 414
Score = 192 (72.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 41/130 (31%), Positives = 69/130 (53%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + L GH + A+F+ ++TGS D+ K+W C+A+ GH+ +I D
Sbjct: 252 RKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCF 311
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
L+A+AS D R++ ++ L GH G ++ I+F+P+ + +LL+ S D T
Sbjct: 312 DYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGN---RLLTGSSDKT 368
Query: 354 CRIWDARYSQ 363
RIWDA+ Q
Sbjct: 369 ARIWDAQTGQ 378
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 57/232 (24%), Positives = 93/232 (40%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
RGH + C F+ V TGS D K+W +++ + + GH +I L+ +++
Sbjct: 174 RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNR 233
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD--------- 350
+ + S D + VW G + L GH +++ F+ S I L S D
Sbjct: 234 IITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLI--LTGSMDKTCKLWDAV 291
Query: 351 DGTC---------RIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQ-- 399
+G C I D+ + Y+ ++ D G L+ H+
Sbjct: 292 NGKCVATLTGHDDEILDSCFD-YTGKLIATASAD---GTARIFSAATRECVTKLEGHEGE 347
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
I ++N G +TGSSD AR+W A Q L VL GH +++
Sbjct: 348 ISKISFNPQGNRLLTGSSDKTARIWDA---------QTGQCLQVLEGHTDEI 390
Score = 150 (57.9 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 59/257 (22%), Positives = 106/257 (41%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
K K LR H + ++SG ITGS DR K+W + L + GH +
Sbjct: 81 KFYLFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVV--Y 138
Query: 292 AVSSNNTL---VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A++ NN +A+ S D ++W + G RGHT + ++F+P+ + + +
Sbjct: 139 AIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLV---ATG 195
Query: 349 SDDGTCRIWDARYSQ-------YSPRI----YLPKPPDAITGKXXXXXXXXXXXXX---- 393
S D T ++WD + + +S I + ITG
Sbjct: 196 SMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVY 255
Query: 394 XLQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
L H +I +N + ++ +TGS D ++W A + L+GH++++
Sbjct: 256 TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKC---------VATLTGHDDEI 306
Query: 452 --NYVQFSGCAVASRSA 466
+ ++G +A+ SA
Sbjct: 307 LDSCFDYTGKLIATASA 323
Score = 131 (51.2 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ KL GH + F+ G ++TGS D+ +IW +T CL GH +I A +
Sbjct: 338 VTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 296 NNTLVASASNDFVIRVWR 313
++ + S D R+WR
Sbjct: 398 KGDIIITGSKDNTCRIWR 415
Score = 112 (44.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 46/209 (22%), Positives = 85/209 (40%)
Query: 282 RGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
R H +T++A++ + + + S D ++W G + L GH V AIAF+ P
Sbjct: 89 RAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN-NPYG 147
Query: 342 IYQLLSSSDDGTCRIWDAR-------YSQYSPRI----YLPKPPDAITGKXXXXXXX--- 387
++ + S D TC++W + ++ I + P+ TG
Sbjct: 148 D-KIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
Query: 388 -XXXXXXXLQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVL 444
L H +I+ ++N +G +TGS D VW A D+ + ++ L
Sbjct: 207 QSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEA------DTGRKVY---TL 257
Query: 445 SGHENDVNYVQFS-GCAVASRSAMSDAFK 472
GH +++ F+ C++ +M K
Sbjct: 258 IGHCAEISSAVFNWDCSLILTGSMDKTCK 286
Score = 94 (38.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 31/130 (23%), Positives = 57/130 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD-VHPFNPRIAMSA 606
++ V++ D +L MD +W+AV+G V +LTGH +LD + ++ +A
Sbjct: 264 ISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDE--ILDSCFDYTGKLIATA 321
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVL--SDDVGQIYLLNTGQGES 664
DG ++ + E ++ F+P G ++ SD +I+ TGQ
Sbjct: 322 SADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQTGQCLQ 381
Query: 665 QKDAKYDQFF 674
+ D+ F
Sbjct: 382 VLEGHTDEIF 391
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 156 (60.0 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 37/124 (29%), Positives = 65/124 (52%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH V + G+F ++GS D +++W + T GH D+ +A S++
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 297 NTLVASASNDFVIRVWR-LPD-GLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + SAS D I++W L + IS GH V+ + FSP + + ++S+S D T
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPN-TLVPTIVSASWDKTV 175
Query: 355 RIWD 358
++W+
Sbjct: 176 KVWN 179
Score = 154 (59.3 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 227 STMVQKMQNIKKLRGHRDAVYCAIFDRSGRF--VITGSDDRLVKIWSMETAFCLASCRGH 284
+T+ + I + GH++ V C F + +++ S D+ VK+W+++ S GH
Sbjct: 133 NTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGH 192
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
G + +AVS + +L AS D VI +W L +G + L + + ++ FSP Y
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFSPNR---YW 248
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCA 404
L +++++ + RIWD + + +A + Q I C +
Sbjct: 249 LCAATEN-SIRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGN--------QKKVIYCTS 299
Query: 405 YN--ANGTVFVTGSSDTFARVW 424
N A+G+ +G +D RVW
Sbjct: 300 LNWSADGSTLFSGYTDGVVRVW 321
Score = 138 (53.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM--ETAFCLASCRGHEGDITDL 291
+ ++ GH V F R +++ S DR +K+W+ E + ++ GH+ ++ +
Sbjct: 96 ETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCV 155
Query: 292 AVSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
S N + + SAS D ++VW L + + L GH+G + +A SP S S
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLC---ASGG 212
Query: 350 DDGTCRIWD 358
DG +WD
Sbjct: 213 KDGVILLWD 221
Score = 127 (49.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 239 LRGHRDAVYCAI--FDRSGRFVITGSDDRLVKIWSM---ETAFCLASCR--GHEGDITDL 291
+R H D V D S ++T S D+ + +W + + ++ +A R GH + D+
Sbjct: 11 MRAHTDIVTAIATPIDNSD-IIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+SS+ S S D +R+W L G GHT V ++AFS Q++S+S D
Sbjct: 70 VLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR---QIVSASRD 126
Query: 352 GTCRIWD 358
T ++W+
Sbjct: 127 RTIKLWN 133
Score = 97 (39.2 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++A D + VWN + L +SL GHS + V P + + S G DG ++WD+ E
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAE 224
Query: 620 GTPIRIYEIGRFKLVDGK-FSPD 641
G ++Y + ++ FSP+
Sbjct: 225 GK--KLYSLEAGSIIHSLCFSPN 245
Score = 49 (22.3 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP-RIAMSA 606
+N + S D + D I +W+ +G ++SL A S + + F+P R + A
Sbjct: 196 LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL---EAGSIIHSLC-FSPNRYWLCA 251
Query: 607 GYDGRTIVWDI 617
+ +WD+
Sbjct: 252 ATENSIRIWDL 262
Score = 41 (19.5 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD---VHPFNPR-----IAMSAGY 608
NR+ L A + I +W+ S+V L S + V N + +++
Sbjct: 245 NRYWLCAATENSIRIWDLESKSVVEDLKVDLKSEAEKNEGGVGTGNQKKVIYCTSLNWSA 304
Query: 609 DGRTIVWDIWEGTPIRIYEIGRF 631
DG T+ +G +R++ IGR+
Sbjct: 305 DGSTLFSGYTDGV-VRVWGIGRY 326
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 166 (63.5 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 40/124 (32%), Positives = 62/124 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +AV F +G+++ +GS D V+ W + T + +GH + +A S +
Sbjct: 123 LEGHTEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGK 182
Query: 299 LVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+AS + I +W G I VL GH+ +T + + P P Y L S+S DG+
Sbjct: 183 KLASGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHINPECRY-LASASKDGSI 241
Query: 355 RIWD 358
RIWD
Sbjct: 242 RIWD 245
Score = 142 (55.0 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 34/122 (27%), Positives = 57/122 (46%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++++ GH+ + +F R + + S D+ +K+W T L S RGH + +A S+
Sbjct: 378 LERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSA 437
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S S+D ++VW L GH V A +SP + S D R
Sbjct: 438 DSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRV---ASGGKDKCLR 494
Query: 356 IW 357
IW
Sbjct: 495 IW 496
Score = 106 (42.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 29/103 (28%), Positives = 46/103 (44%)
Query: 239 LRGHRDAVYCAIFDR-----SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
L GH + C ++ R++ + S D ++IW C GH +T +
Sbjct: 208 LTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQSVTCVKW 267
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
+ L+ S+S D I+VWR DG+ L+GH V +A S
Sbjct: 268 GGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALS 309
Score = 94 (38.1 bits), Expect = 5.9e-13, Sum P(2) = 5.9e-13
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I WS D+R +++ D + VW+A L L GH+ + D P R+A S G
Sbjct: 430 VYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVA-SGG 488
Query: 608 YDGRTIVW 615
D +W
Sbjct: 489 KDKCLRIW 496
Score = 92 (37.4 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
Identities = 28/99 (28%), Positives = 45/99 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N +++S D R + +A D I +W G + SL GH ++ Y + + R+ +S
Sbjct: 388 INQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQI-AWSADSRLLVSGS 446
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSI 645
D VWD E + I G V +SPDG +
Sbjct: 447 SDSTLKVWDA-ETKKLAIDLPGHADEVFATDWSPDGQRV 484
Score = 59 (25.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS--------ASSYVLDVHPFN 599
V + W D + ++ D I VW + DG L +L GH+ ++ YVL F
Sbjct: 262 VTCVKWGGDG-LLYSSSQDRTIKVWRSQDGILCRTLQGHAHWVNTMALSTDYVLRTGAFE 320
Query: 600 P 600
P
Sbjct: 321 P 321
Score = 56 (24.8 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R++ +A D I +W+ + G LTGH+ S V V + S+ D RTI VW
Sbjct: 230 RYLASASKDGSIRIWDTLMGRCDKILTGHTQS--VTCVKWGGDGLLYSSSQD-RTIKVWR 286
Query: 617 IWEG 620
+G
Sbjct: 287 SQDG 290
Score = 47 (21.6 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 41/183 (22%), Positives = 65/183 (35%)
Query: 625 IYEIGRFKLVDGKFSPD---GTSIVLSDDVGQIYLLNTGQGESQKDAKYDQF--FLG--- 676
+ G F+ + +P G+ L D Q Y GQG + + D F FL
Sbjct: 313 VLRTGAFEPAEATINPQDMSGSLAELKDKAQQRYDKVRGQGPERLVSGSDDFTLFLWRPA 372
Query: 677 -DYRPLIRDSLGNVLDQETQLVPHRRNIQDPLCDSSMIPYEE---PYQSMYQQRRLGALG 732
D +PL R + L + P R I D S+ +E Y + +
Sbjct: 373 EDKKPLERMTGHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQ 432
Query: 733 IEWRPSSIKLAIGLDFSLGQDYAMPPLE-DLERMMEPVPEFIDPVY---WEPENE-VISD 787
I W S L G D + + + +++ +P D V+ W P+ + V S
Sbjct: 433 IAWSADSRLLVSG-----SSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASG 487
Query: 788 DND 790
D
Sbjct: 488 GKD 490
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 172 (65.6 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 42/130 (32%), Positives = 64/130 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I +L GH V+ FD + + + +GS DR + +W+ C GH+G I DL
Sbjct: 59 IMELTGHSGEVFAVRFDPTAQHIASGSMDRSILLWNTYGQ-CENYGILSGHKGAILDLQW 117
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S ++ + SAS D + W + G I GH + ++ S R + L+S+SDDGT
Sbjct: 118 SRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEM--LVSASDDGT 175
Query: 354 CRIWDARYSQ 363
IWD R +
Sbjct: 176 MGIWDPRQKE 185
Score = 126 (49.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 39/147 (26%), Positives = 63/147 (42%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGR-FVITGSDDRLVKIWSME 273
++ SA + S ++ Q I++ GH + + + G+ +++ SDD + IW
Sbjct: 123 TIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPR 182
Query: 274 TAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAI 333
+ E IT +A S V S D I VW + + + GH +T++
Sbjct: 183 QKEAIDYLET-ELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSL 241
Query: 334 AFSPRPSAIYQLLSSSDDGTCRIWDAR 360
SP LLS+S D T R WD R
Sbjct: 242 EVSPDSQT---LLSNSFDSTVRTWDIR 265
Score = 107 (42.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/128 (24%), Positives = 55/128 (42%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+N L GH+ A+ + R + + + S D + W +E+ + GHE I + +
Sbjct: 100 ENYGILSGHKGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEI 159
Query: 294 SSNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
S ++ SAS+D + +W I L +TA+A S + ++ S D
Sbjct: 160 SKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETEL-PITAVAQSEAGNEVF---SGGIDN 215
Query: 353 TCRIWDAR 360
+WD R
Sbjct: 216 AIHVWDIR 223
Score = 81 (33.6 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 27/94 (28%), Positives = 45/94 (47%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
V + +D I VW+ ++V+S+ GH + L+V P + + +S +D WDI
Sbjct: 208 VFSGGIDNAIHVWDIRKKAIVYSMAGHMDTITSLEVSP-DSQTLLSNSFDSTVRTWDIRP 266
Query: 620 GTP----IRIYE---IGRFK-LVDGKFSPDGTSI 645
P IR Y+ +G K L+ ++P G I
Sbjct: 267 FAPTNRHIRTYDGAPVGLEKNLIRASWNPAGDKI 300
Score = 60 (26.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
W+ + A D + VW+ G +++ L GH + + P N I +SA D
Sbjct: 293 WNPAGDKIAAGSGDRSVVVWDFKTGKILYKLPGHKGTVNDVRFTPNNEPIIVSASSDRNL 352
Query: 613 IVWDI 617
++ ++
Sbjct: 353 MLGEL 357
Score = 55 (24.4 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 596 HPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTSIVLS 648
+P +IA +G D +VWD G + Y++ K + D +F+P+ I++S
Sbjct: 294 NPAGDKIAAGSG-DRSVVVWDFKTGKIL--YKLPGHKGTVNDVRFTPNNEPIIVS 345
Score = 42 (19.8 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 15/58 (25%), Positives = 23/58 (39%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
++ ++N G GS D VW + L L GH+ VN V+F+
Sbjct: 288 LIRASWNPAGDKIAAGSGDRSVVVWDFKTGKI---------LYKLPGHKGTVNDVRFT 336
Score = 38 (18.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 1437 VIYSRQGHQEFIESTGSQEVGP 1458
++YS GH + I S EV P
Sbjct: 227 IVYSMAGHMDTITSL---EVSP 245
Score = 37 (18.1 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 473 EENVPKFKNSWF-CHDNIVTCSRDGSAIIW 501
E+N+ + SW D I S D S ++W
Sbjct: 285 EKNL--IRASWNPAGDKIAAGSGDRSVVVW 312
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 158 (60.7 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 36/124 (29%), Positives = 65/124 (52%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+++ GH V + G+F ++GS D +++W + T GH D+ +A S++
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 297 NTLVASASNDFVIRVWR-LPD-GLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
N + SAS D I++W L + IS GH V+ + FSP + + ++S+S D T
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPN-TLVPTIVSASWDKTV 175
Query: 355 RIWD 358
++W+
Sbjct: 176 KVWN 179
Score = 150 (57.9 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 48/202 (23%), Positives = 90/202 (44%)
Query: 227 STMVQKMQNIKKLRGHRDAVYCAIFDRSGRF--VITGSDDRLVKIWSMETAFCLASCRGH 284
+T+ + I + GH++ V C F + +++ S D+ VK+W+++ + GH
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGH 192
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
G + +AVS + +L AS D VI +W L +G + L + + ++ FSP Y
Sbjct: 193 SGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFSPNR---YW 248
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCA 404
L +++++ + RIWD + + +A ++ I C +
Sbjct: 249 LCAATEN-SIRIWDLESKSVVEDLKVDLKAEA--------EKTDGSTGIGNKTKVIYCTS 299
Query: 405 YN--ANGTVFVTGSSDTFARVW 424
N A+G +G +D RVW
Sbjct: 300 LNWSADGNTLFSGYTDGVIRVW 321
Score = 146 (56.5 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/129 (27%), Positives = 62/129 (48%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM--ETAFCLASCRGHEGDITDL 291
++ ++ GH V F R +++ S DR +K+W+ E + ++ GH+ ++ +
Sbjct: 96 ESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCV 155
Query: 292 AVSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
S N + + SAS D ++VW L + + L GH+G + +A SP S S
Sbjct: 156 RFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLC---ASGG 212
Query: 350 DDGTCRIWD 358
DG +WD
Sbjct: 213 KDGVILLWD 221
Score = 119 (46.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 258 VITGSDDRLVKIWSM---ETAFCLASCR--GHEGDITDLAVSSNNTLVASASNDFVIRVW 312
++T S D+ + +W + + ++ +A R GH + D+ +SS+ S S D +R+W
Sbjct: 31 IVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLW 90
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L G GHT V ++AFS Q++S+S D T ++W+
Sbjct: 91 DLATGESTRRFVGHTKDVLSVAFSTDNR---QIVSASRDRTIKLWN 133
Score = 94 (38.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++A D + VWN + L ++L GHS + V P + + S G DG ++WD+ E
Sbjct: 166 IVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAE 224
Query: 620 GTPIRIYEIGRFKLVDGK-FSPD 641
G ++Y + ++ FSP+
Sbjct: 225 GK--KLYSLEAGSIIHSLCFSPN 245
Score = 60 (26.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 58/243 (23%), Positives = 95/243 (39%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L A++ + V+ S D ++W+ ++ + + I E D GH+ V+ V+FS
Sbjct: 108 VLSVAFSTDNRQIVSASRDRTIKLWN----TLGECKYTISEAD---GHKEWVSCVRFSPN 160
Query: 460 AVASR--SAMSD-AFKEENVP--KFKNSWFCHD---NIVTCSRDGSAIIWIPRSRRSHGK 511
+ SA D K N+ K +N+ H N V S DGS + S G
Sbjct: 161 TLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS----LCASGGKDGV 216
Query: 512 VGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXV-NMI-VWSLDNRFVLAAI-MDCR 568
+ W A K+ N I +W L+++ V+ + +D +
Sbjct: 217 ILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVVEDLKVDLK 276
Query: 569 ICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEI 628
DGS TG + V+ N SA DG T+ +G IR++ I
Sbjct: 277 AEA-EKTDGS-----TGIGNKTKVIYCTSLN----WSA--DGNTLFSGYTDGV-IRVWGI 323
Query: 629 GRF 631
GR+
Sbjct: 324 GRY 326
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 173 (66.0 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/117 (34%), Positives = 60/117 (51%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+ +ASA++D +++W L G +S GHTG V + F P Y L S S D
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSD 210
Score = 158 (60.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 153 (58.9 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 66 (28.3 bits), Expect = 7.3e-13, Sum P(2) = 7.3e-13
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP N + S
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGS 208
Query: 608 YD 609
D
Sbjct: 209 SD 210
Score = 57 (25.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 176
Query: 618 WEG 620
G
Sbjct: 177 TAG 179
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 172 (65.6 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 41/123 (33%), Positives = 62/123 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
+ GH +AV C F G+ + +GS D V++W + T L +C+GH+ + +A S +
Sbjct: 105 IAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGK 164
Query: 299 LVASASNDFVIRVWRLPDG-LPISVLRGHTGAVTAIAFSP--RPSAIYQLLSSSDDGTCR 355
+ S S I W G L S L GH +T I++ P S + ++SS DG R
Sbjct: 165 HLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDAR 224
Query: 356 IWD 358
IWD
Sbjct: 225 IWD 227
Score = 145 (56.1 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/133 (27%), Positives = 66/133 (49%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
+PS V K Q K+L GH+ V F G+++ + S D+ V++W+ T + RGH
Sbjct: 345 EPS--VSK-QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGH 401
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
G + ++ S+++ L+ S S D +++W + L GH V A+ +SP +
Sbjct: 402 VGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV-- 459
Query: 345 LLSSSDDGTCRIW 357
+S D ++W
Sbjct: 460 -VSGGKDRVLKLW 471
Score = 125 (49.1 bits), Expect = 0.00055, P = 0.00055
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 258 VITGSDDRLVKIWSMETAFCLAS-CRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPD 316
+++GSDD + +W + GH+ + + S + +ASAS D +R+W
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGIT 391
Query: 317 GLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
G ++V RGH G V +++S S + LLS S D T +IW+ R
Sbjct: 392 GQFVTVFRGHVGPVYQVSWSA-DSRL--LLSGSKDSTLKIWEIR 432
Score = 95 (38.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C + GH + ++ S + +AS S D +R+W L P+ +GH V +A+S
Sbjct: 101 CSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWS 160
Query: 337 PRPSAIYQLLSSSDDGTCRIWDAR 360
P L+S S G W+ +
Sbjct: 161 PDGK---HLVSGSKSGEICCWNPK 181
Score = 92 (37.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/125 (25%), Positives = 57/125 (45%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLAS-CRGHEGDITDLA-----V 293
+GH++ V + G+ +++GS + W+ + S GH+ IT ++ +
Sbjct: 148 KGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHL 207
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
SS ++S D R+W + I L GHT AVT + + IY + S D T
Sbjct: 208 SSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGG-DGIIY---TGSQDCT 263
Query: 354 CRIWD 358
++W+
Sbjct: 264 IKMWE 268
Score = 86 (35.3 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + +S D +++ +A D + +WN + G V GH Y + + R+ +S
Sbjct: 363 VNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA-DSRLLLSGS 421
Query: 608 YDGRTIVWDIW-----EGTPIRIYEIGRFKLVDGKFSPDGTSIV 646
D +W+I + P E+ F VD +SPDG +V
Sbjct: 422 KDSTLKIWEIRTKKLKQDLPGHADEV--FA-VD--WSPDGEKVV 460
Score = 84 (34.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 20/73 (27%), Positives = 34/73 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + WS D+R +L+ D + +W L L GH+ + +D P ++ +S G
Sbjct: 405 VYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV-VSGG 463
Query: 608 YDGRTIVWDIWEG 620
D V +W+G
Sbjct: 464 KDR---VLKLWKG 473
Score = 65 (27.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
V + W D + DC I +W G L+ L GH
Sbjct: 244 VTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIRELKGH 281
Score = 55 (24.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 31/111 (27%), Positives = 49/111 (44%)
Query: 413 VTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS--GCAVASRS----- 465
V+GS D +W + SV S+QP L +GH+ VN+V FS G +AS S
Sbjct: 333 VSGSDDFTMFLW---EPSV--SKQPKKRL---TGHQQLVNHVYFSPDGKWIASASFDKSV 384
Query: 466 --------AMSDAFKEENVPKFKNSWFCHDNIVTC-SRDGSAIIWIPRSRR 507
F+ P ++ SW ++ S+D + IW R+++
Sbjct: 385 RLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK 435
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 412 FVTGSSDTFARVWS-ACKSSV 431
FVT S D AR+W K S+
Sbjct: 214 FVTSSKDGDARIWDITLKKSI 234
Score = 42 (19.8 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 8/42 (19%), Positives = 23/42 (54%)
Query: 404 AYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLS 445
+++A+ + ++GS D+ ++W ++ + P H +V +
Sbjct: 409 SWSADSRLLLSGSKDSTLKIWEIRTKKLKQ-DLPGHADEVFA 449
Score = 42 (19.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 490 VTCSRDGSAIIW 501
VT S+DG A IW
Sbjct: 215 VTSSKDGDARIW 226
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 208 (78.3 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 45/125 (36%), Positives = 65/125 (52%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + ++ TGS D+ V++WS + + GH G + LA S N +
Sbjct: 420 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYL 479
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT +T++ FSP S + S+S D + R+WD R
Sbjct: 480 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLV---ASASMDNSVRVWDIR 536
Query: 361 YSQYS 365
S S
Sbjct: 537 SSHCS 541
Score = 153 (58.9 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 33/119 (27%), Positives = 56/119 (47%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+GH V+ + + S DR ++WS + + L GH D+ + N+
Sbjct: 377 QGHAYPVWDLDISPHSLYFASASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 436
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+ S D +R+W G + + GH G V ++AFSP Y L S+ +D ++WD
Sbjct: 437 LATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGK--Y-LASAGEDQRLKLWD 492
Score = 144 (55.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 27/82 (32%), Positives = 47/82 (57%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+++ + +D+ +K+W + + RGH +IT
Sbjct: 452 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 511
Query: 291 LAVSSNNTLVASASNDFVIRVW 312
L S +++LVASAS D +RVW
Sbjct: 512 LTFSPDSSLVASASMDNSVRVW 533
Score = 41 (19.5 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWN 573
+ + +S D+ V +A MD + VW+
Sbjct: 509 ITSLTFSPDSSLVASASMDNSVRVWD 534
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 174 (66.3 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 40/127 (31%), Positives = 66/127 (51%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 86 IMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 144
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 145 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 202
Query: 354 CRIWDAR 360
++WD R
Sbjct: 203 VKLWDIR 209
Score = 163 (62.4 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 169 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAVQTFQNTYQVLA 225
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 226 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 282
Query: 351 DGTCRIWDARYSQYSPR 367
D T RIWD R ++P+
Sbjct: 283 DNTVRIWDVR--PFAPK 297
Score = 127 (49.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 35/148 (23%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 128 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 187
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + + + +T V A+ F+ Q++S D
Sbjct: 188 RRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 243
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 244 IKVWDLRQNKLTYTMRGHA----DSVTG 267
Score = 82 (33.9 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + D + VW+ +++ L GH+ S L HP P I +SA D R
Sbjct: 320 WSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEP-IILSASSDKRL 378
Query: 613 IVWDI 617
+ +I
Sbjct: 379 YMGEI 383
Score = 68 (29.0 bits), Expect = 2.4e-11, Sum P(3) = 2.4e-11
Identities = 24/108 (22%), Positives = 50/108 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D +WD+
Sbjct: 235 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRIWDVRP 293
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P ++I++ + F+ L+ +SPDG+ I +Y+ +T
Sbjct: 294 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDT 341
Score = 60 (26.2 bits), Expect = 8.8e-11, Sum P(2) = 8.8e-11
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L C+++ +G+ GS+D F VW + L L GH VN + F
Sbjct: 315 LLRCSWSPDGSKIAGGSADRFVYVWDTTSRRI---------LYKLPGHAGSVNELAFHPE 365
Query: 460 AVASRSAMSD 469
SA SD
Sbjct: 366 EPIILSASSD 375
Score = 40 (19.1 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 196 TGSDDGTVKLWDIRKKAAVQTFQNTYQ--VLAVTFNDTSDQIISG 238
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 174 (66.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 41/127 (32%), Positives = 65/127 (51%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH AVY F+ +G + +GS DR + +W + C +GH+ I DL
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVH-GDCKNFMVLKGHKNAILDLHW 104
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+S+ + + SAS D +R W + G I + H+ V + + R + ++S SDDGT
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPL--IISGSDDGT 162
Query: 354 CRIWDAR 360
++WD R
Sbjct: 163 AKLWDMR 169
Score = 137 (53.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/139 (28%), Positives = 63/139 (45%)
Query: 230 VQKMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
V+ + IKK+ H V C R +I+GSDD K+W M + + + I
Sbjct: 125 VETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD-KYQI 183
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
T ++ S + + D ++VW L G L GH +T ++ SP S Y L +
Sbjct: 184 TAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGS--YLLTNG 241
Query: 349 SDDGTCRIWDARYSQYSPR 367
D+ C +WD R Y+P+
Sbjct: 242 MDNKLC-VWDMR--PYAPQ 257
Score = 117 (46.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 33/147 (22%), Positives = 63/147 (42%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+N L+GH++A+ + G +++ S D+ V+ W +ET + H +
Sbjct: 87 KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCP 146
Query: 294 SSNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ L+ S S+D ++W + I +TA++FS I+ + D
Sbjct: 147 TRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIF---TGGVDN 202
Query: 353 TCRIWDARYSQYSPRIYLPKPPDAITG 379
++WD R + + + L D ITG
Sbjct: 203 DVKVWDLRKGEAT--MTLEGHQDTITG 227
Score = 76 (31.8 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 24/103 (23%), Positives = 48/103 (46%)
Query: 565 MDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTP-- 622
+D + VW+ G +L GH + + + P + ++ G D + VWD+ P
Sbjct: 200 VDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYL-LTNGMDNKLCVWDMRPYAPQN 258
Query: 623 --IRIYEIGR--FK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
++I+E + F+ L+ +SPDGT + +++ +T
Sbjct: 259 RCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Score = 68 (29.0 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRI 602
WS D V A D + +W+ ++ L GH+ S HP P I
Sbjct: 280 WSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPII 329
Score = 63 (27.2 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 20/70 (28%), Positives = 29/70 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGC 459
+L C+++ +GT GSSD +W S + I++L GH VN F
Sbjct: 275 LLKCSWSPDGTKVTAGSSDRMVHIWDTT------SRRTIYKLP---GHTGSVNECVFHPT 325
Query: 460 AVASRSAMSD 469
S SD
Sbjct: 326 EPIIGSCSSD 335
Score = 49 (22.3 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 605 SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIV 646
+ G D VWD+ +G E G + G SPDG+ ++
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLE-GHQDTITGMSLSPDGSYLL 238
Score = 49 (22.3 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 23/82 (28%), Positives = 37/82 (45%)
Query: 554 SLDNRFVLAAIMDCRICVWN----AVDGSLVHSLTGHSAS-SYVLDVHPFNPR-IAMSAG 607
S D ++L MD ++CVW+ A V GH + L ++P ++AG
Sbjct: 231 SPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAG 290
Query: 608 YDGRTIVWDIWEGTPIR-IYEI 628
R + IW+ T R IY++
Sbjct: 291 SSDRMV--HIWDTTSRRTIYKL 310
Score = 43 (20.2 bits), Expect = 3.9e-10, Sum P(3) = 3.9e-10
Identities = 9/17 (52%), Positives = 10/17 (58%)
Query: 1107 NRCVKLENGHG-KFSSN 1122
NRCVK+ GH F N
Sbjct: 258 NRCVKIFEGHQHNFEKN 274
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 207 (77.9 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 45/125 (36%), Positives = 65/125 (52%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + ++ TGS D+ V++WS + + GH G + LA S N +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT +T++ FSP S I S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLI---ASASMDNSVRVWDIR 540
Query: 361 YSQYS 365
+ S
Sbjct: 541 NTHCS 545
Score = 159 (61.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+GH V+ + +GS DR ++WS + + L GH D+ + N+
Sbjct: 381 QGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+ S D +R+W G + + GH G V ++AFSP Y L S+ +D ++WD
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGK--Y-LASAGEDQRLKLWD 496
Score = 144 (55.7 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+++ + +D+ +K+W + + RGH +IT
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITS 515
Query: 291 LAVSSNNTLVASASNDFVIRVW 312
L S +++L+ASAS D +RVW
Sbjct: 516 LTFSPDSSLIASASMDNSVRVW 537
Score = 40 (19.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWN 573
+ + +S D+ + +A MD + VW+
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRVWD 538
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 207 (77.9 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 48/140 (34%), Positives = 70/140 (50%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + ++ TGS D+ V++WS + + GH G + LA S N +
Sbjct: 442 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 501
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT +T++ FSP S I S+S D + R+WD R
Sbjct: 502 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI---ASASMDNSVRVWDIR 558
Query: 361 YSQYSPRIYLPKPPDAITGK 380
+ Y P D +G+
Sbjct: 559 NT------YCSTPADGSSGE 572
Score = 158 (60.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+GH V+ + +GS DR ++WS + + L GH D+ + N+
Sbjct: 399 QGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 458
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+ S D +R+W G + + GH G V ++AFSP Y L S+ +D ++WD
Sbjct: 459 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGK--Y-LASAGEDQRLKLWD 514
Score = 145 (56.1 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 28/103 (27%), Positives = 55/103 (53%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+++ + +D+ +K+W + + RGH +IT
Sbjct: 474 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 533
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAI 333
L S +++L+ASAS D +RVW + + + G +G + +
Sbjct: 534 LTFSPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGV 576
Score = 40 (19.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWN 573
+ + +S D+ + +A MD + VW+
Sbjct: 531 ITSLTFSPDSSLIASASMDNSVRVWD 556
Score = 37 (18.1 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 1670 YRSLEAAKDDINVMLSNAESYFIKNAAL--SAKVERLRDWFNRT 1711
Y+ L D+I + + +S I +A++ S +V +R+ + T
Sbjct: 521 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTYCST 564
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 184 (69.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L+GH D V+C F+ +++GS D VKIW ++T CL + H I+ + +
Sbjct: 116 LKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNC 175
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSSDDGTC 354
N +L+ S S D + R+W G + L V+ + FSP I L+++ D T
Sbjct: 176 NGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYI---LTATLDNTL 232
Query: 355 RIWDARYSQ 363
++WD YS+
Sbjct: 233 KLWD--YSR 239
Score = 178 (67.7 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 39/130 (30%), Positives = 65/130 (50%)
Query: 235 NIKK-LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N KK L GH + + +++ SDD+ +K+W M + CL + +GH +
Sbjct: 72 NCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDF 131
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+ + L+ S S D +++W + G + L H+ ++A+ F+ S I +S S DG
Sbjct: 132 NPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLI---VSGSYDGL 188
Query: 354 CRIWDARYSQ 363
CRIWDA Q
Sbjct: 189 CRIWDAASGQ 198
Score = 174 (66.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 38/122 (31%), Positives = 68/122 (55%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH A+ F +G ++ + + D L+ IW C + GH +I+D+A SS+++
Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS 94
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ SAS+D ++VW + G + L+GH+ V F+P PS + ++S S D + +IW+
Sbjct: 95 RLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNP-PSNL--IVSGSFDESVKIWE 151
Query: 359 AR 360
+
Sbjct: 152 VK 153
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 28/82 (34%), Positives = 47/82 (57%)
Query: 236 IKKLRGHRDAVYC--AIFDRSGR-FVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+K GH++ YC A F +GR +V++GS+D +V IW+++T + +GH + A
Sbjct: 243 LKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAA 302
Query: 293 VSSNNTLVASAS--NDFVIRVW 312
++ASA+ ND I+VW
Sbjct: 303 CHPTKNIIASAALENDKTIKVW 324
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT---LVASASNDF 307
F +G++++T + D +K+W CL + GH+ + L S + T V S S D
Sbjct: 216 FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDN 275
Query: 308 VIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
++ +W L + L+GHT V + A P + I + +D T ++W +
Sbjct: 276 MVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASA-ALENDKTIKVWSS 326
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGD--ITDLAV 293
+K L H D + F+ +G +++GS D L +IW + CL + EG+ ++ +
Sbjct: 158 LKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL-ADEGNPPVSFVKF 216
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N + +A+ D +++W G + GH + S + ++S S+D
Sbjct: 217 SPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNM 276
Query: 354 CRIWDARYSQYSPRI 368
IW+ + + R+
Sbjct: 277 VYIWNLQTKEIVQRL 291
Score = 69 (29.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 15/72 (20%), Positives = 33/72 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVL--DVHPFNPRIAMS 605
V+ + +S + +++L A +D + +W+ G + + TGH Y L + +S
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270
Query: 606 AGYDGRTIVWDI 617
D +W++
Sbjct: 271 GSEDNMVYIWNL 282
Score = 63 (27.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
++V++ D + +WN +V L GH+ HP IA +A + +TI VW
Sbjct: 266 KWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALENDKTIKVW 324
Score = 62 (26.9 bits), Expect = 2.2e-11, Sum P(2) = 2.2e-11
Identities = 26/118 (22%), Positives = 53/118 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMD--CRICVWNAVDGSLVHSLT--GHSASSYVLDVHPFNPRIA 603
++ + ++ + +++ D CRI W+A G + +L G+ S+V P N +
Sbjct: 168 ISAVNFNCNGSLIVSGSYDGLCRI--WDAASGQCLRTLADEGNPPVSFV-KFSP-NGKYI 223
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFK--LVDGKFSPDGTSIVLS-DDVGQIYLLN 658
++A D +WD G ++ Y + + + FS G V+S + +Y+ N
Sbjct: 224 LTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWN 281
Score = 44 (20.5 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 15/72 (20%), Positives = 30/72 (41%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASR 464
++ NG +T + D ++W + L +GH+N+ Y F+ +V R
Sbjct: 216 FSPNGKYILTATLDNTLKLWDYSRGRC---------LKTYTGHKNE-KYCLFASFSVTGR 265
Query: 465 SAMSDAFKEENV 476
+ E+N+
Sbjct: 266 KWVVSG-SEDNM 276
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + ++ TGS D+ V++WS + + GH G + L+ S N +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYL 483
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT ++T++AFSP I S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLI---ASASMDNSVRVWDIR 540
Score = 156 (60.0 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+GH V+ + +GS DR ++WS + + L GH D+ + N+
Sbjct: 381 QGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+ S D +R+W G + + GH G V +++FSP Y L S+ +D ++WD
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGK--Y-LASAGEDQRLKLWD 496
Score = 143 (55.4 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+++ + +D+ +K+W + + RGH IT
Sbjct: 456 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 515
Query: 291 LAVSSNNTLVASASNDFVIRVW 312
LA S ++ L+ASAS D +RVW
Sbjct: 516 LAFSPDSGLIASASMDNSVRVW 537
Score = 39 (18.8 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWN 573
+ + +S D+ + +A MD + VW+
Sbjct: 513 ITSLAFSPDSGLIASASMDNSVRVWD 538
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 169 (64.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 43/154 (27%), Positives = 69/154 (44%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
KP + +K L + AV F+ G + +T D+ +K+W+ L + GH
Sbjct: 7 KPRGPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
++ D A S +N+ + S D + +W + G + RGH G V + F+ + I
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVI-- 124
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT 378
LS S D T R WD R + P L + D I+
Sbjct: 125 -LSGSIDSTIRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 111 (44.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 35/134 (26%), Positives = 60/134 (44%)
Query: 236 IKKLRGHRDAVYCAI--FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
++ GH V A FD S + +G D+ V +W + + + RGH G + +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSS--LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF 117
Query: 294 SSNNTLVASASNDFVIRVW----RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ T++ S S D IR W R P+ P+ L ++++ S +++L+ S
Sbjct: 118 NEEATVILSGSIDSTIRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEVLAGS 170
Query: 350 DDGTCRIWDARYSQ 363
DG R +D R Q
Sbjct: 171 VDGRVRRYDLRMGQ 184
Score = 78 (32.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 20/75 (26%), Positives = 35/75 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMS 605
+ I +S D + L + +D + + + G L+ TGH Y LD + + + +S
Sbjct: 194 ITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHV-VS 252
Query: 606 AGYDGRTIVWDIWEG 620
DG+ WD+ EG
Sbjct: 253 CSEDGKVFFWDLVEG 267
Score = 48 (22.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V++ D ++ W+ V+G+L +L L HP P + + G
Sbjct: 250 VVSCSEDGKVFFWDLVEGALALALPVGPGVVQSLTYHPTEPCLLTAMG 297
Score = 45 (20.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 488 NIVTCSRDGSAIIW 501
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 166 (63.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 39/124 (31%), Positives = 65/124 (52%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
+ GH +AV F G+ ++ D V+IW + T+ + +GH + +A S ++
Sbjct: 136 MSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSK 195
Query: 299 LVASASNDFVIRVWRLPDGLPI-SVLRGHTGAVTAIAFSP---RPSAIYQLLSSSDDGTC 354
+A+A + IR+W G + S L+GHT +T +++ P P + +L SSS D T
Sbjct: 196 KIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCV-RLASSSKDSTI 254
Query: 355 RIWD 358
RIWD
Sbjct: 255 RIWD 258
Score = 153 (58.9 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
+I +L GH+ + F GR+ + S D+ +K+W ++ L + RGH G + + S
Sbjct: 386 SISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWS 445
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
S++ + S S D +++W + L GH V + +SP + S S D
Sbjct: 446 SDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRV---ASGSKDRLL 502
Query: 355 RIW 357
RIW
Sbjct: 503 RIW 505
Score = 132 (51.5 bits), Expect = 0.00011, P = 0.00011
Identities = 36/104 (34%), Positives = 55/104 (52%)
Query: 258 VITGSDDRLVKIWSME-TAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPD 316
+I+GSDD V +W+ T ++ GH+ I ++ S + ASAS D I++W
Sbjct: 366 LISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQS 425
Query: 317 GLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
G + RGH GAV + +S + Y L+S S D T +IWD +
Sbjct: 426 GKFLGNFRGHVGAVYQVCWSS--DSRY-LVSGSKDSTLKIWDIK 466
Score = 107 (42.7 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C +S GH + + A S + S D +R+W + P L+GHT V +A+S
Sbjct: 132 CASSMSGHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWS 191
Query: 337 PRPSAIYQLLSSSDDGTCRIW 357
P I ++ +G RIW
Sbjct: 192 PDSKKI---ATAGMEGDIRIW 209
Score = 104 (41.7 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 260 TGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLP 319
+ S D ++IW E+ L S GH +T L L+ S S D +RV+ DG
Sbjct: 247 SSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRL 305
Query: 320 ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ VL GH V +A + Y L + S D T + +D
Sbjct: 306 VRVLDGHAHWVNTLALNTD----YVLRTGSYDHTGKEYD 340
Score = 104 (41.7 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 35/126 (27%), Positives = 58/126 (46%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASC-RGHEGDITDLA----- 292
L+GH + V + + + T + ++IW +T L S +GH IT L+
Sbjct: 178 LKGHTNWVLQVAWSPDSKKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFH 237
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
++ +AS+S D IR+W + L GHT +VT + + IY S S D
Sbjct: 238 LNPKCVRLASSSKDSTIRIWDTESCKNLMSLSGHTMSVTCLKWGGE-GLIY---SGSQDR 293
Query: 353 TCRIWD 358
T R+++
Sbjct: 294 TVRVFN 299
Score = 89 (36.4 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + WS D+R++++ D + +W+ + L GH+ Y +D P R+A S
Sbjct: 439 VYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVA-SGS 497
Query: 608 YDGRTIVWDI 617
D +W +
Sbjct: 498 KDRLLRIWTV 507
Score = 81 (33.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 18/70 (25%), Positives = 33/70 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N++ +S D R+ +A D I +W+ G + + GH + Y + + R +S
Sbjct: 397 INLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQV-CWSSDSRYLVSGS 455
Query: 608 YDGRTIVWDI 617
D +WDI
Sbjct: 456 KDSTLKIWDI 465
Score = 53 (23.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + W + + + D + V+N DG LV L GH+ + ++ N + G
Sbjct: 275 VTCLKWGGEG-LIYSGSQDRTVRVFNTTDGRLVRVLDGHA---HWVNTLALNTDYVLRTG 330
Query: 608 -YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLS--DD 650
YD +D E R+ + R+ D K G I++S DD
Sbjct: 331 SYDHTGKEYDTLEEAQ-RV-ALERYN--DVKAKSKGMEILISGSDD 372
Score = 49 (22.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS--GCAVA 462
++++ V+GS D+ ++W K+ + E P GH ++V V +S G VA
Sbjct: 444 WSSDSRYLVSGSKDSTLKIWDI-KTKKMEKELP--------GHADEVYTVDWSPDGDRVA 494
Query: 463 SRS 465
S S
Sbjct: 495 SGS 497
Score = 43 (20.2 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/63 (23%), Positives = 30/63 (47%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
D I +W+ + SL+GH+ S L + + +G RT+ V++ +G +R
Sbjct: 251 DSTIRIWDTESCKNLMSLSGHTMSVTCLK---WGGEGLIYSGSQDRTVRVFNTTDGRLVR 307
Query: 625 IYE 627
+ +
Sbjct: 308 VLD 310
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 176 (67.0 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 39/129 (30%), Positives = 65/129 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DL 291
+ + +++ H D V C F +F+ T S D+ VKIW+ T + H +
Sbjct: 650 EKLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHF 709
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
+SN+ L+A+ SND+ +++W L + + GHT +V+ FSP L S S D
Sbjct: 710 TNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQV---LASCSAD 766
Query: 352 GTCRIWDAR 360
GT ++WD +
Sbjct: 767 GTLKLWDVK 775
Score = 148 (57.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 47/138 (34%), Positives = 67/138 (48%)
Query: 242 HRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
H+D V C I + +F T S D+ KIWS E L RGH+G + + S NNTL+
Sbjct: 1086 HQDTVLSCDISSDATKFSST-SADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNTLL 1144
Query: 301 ASASNDFVIRVWRLPDG------LPISVLRG---HTGAVTAIAFSPRPSAIYQLLSSSDD 351
A+ ++ IR+W + +G PISV G H G VT + FSP L+S+
Sbjct: 1145 ATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTK---MLVSAG-- 1199
Query: 352 GTCRIWDARYSQYSPRIY 369
G + W+ + S Y
Sbjct: 1200 GYLKWWNVVTGESSQTFY 1217
Score = 146 (56.5 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 33/130 (25%), Positives = 66/130 (50%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ M+N+ +L R H DAVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 603 KNMKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV 662
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A S+++ +A+ S D +++W G + + H+ V F+ + + L +
Sbjct: 663 LCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLL-LATG 721
Query: 349 SDDGTCRIWD 358
S+D ++WD
Sbjct: 722 SNDYFLKLWD 731
Score = 129 (50.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/116 (26%), Positives = 57/116 (49%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + G ++ + ++ V ++ + ++ LA GH + S +N L A
Sbjct: 803 VKCCSWSADGAKIMVAAKNK-VFLFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVAL 861
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + + +W + GL ++ RGH V + FSP S+ L+SSDD T R+W+ +
Sbjct: 862 SQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSF---LTSSDDQTIRLWETK 914
Score = 119 (46.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+ H++ V ++ R +++ S D VK+W++ T H+ + +SS+ T
Sbjct: 1042 LQAHQETVKDFRLLKNSR-LLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDAT 1100
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD-GTCRIW 357
+S S D ++W P+ LRGH G V +FS + LL++ DD G RIW
Sbjct: 1101 KFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNT----LLATGDDNGEIRIW 1156
Query: 358 D 358
+
Sbjct: 1157 N 1157
Score = 72 (30.4 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 27/112 (24%), Positives = 50/112 (44%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVH-----SLTGHSAS--SYVLDVHPFNPRIAMS 605
+S++N + + I +WN +G L+H S+ +A+ +V D+ F+P M
Sbjct: 1137 FSVNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLC-FSPDTKML 1195
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
G W++ G + + L SPD + V D++G +Y+L
Sbjct: 1196 VSAGGYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYIL 1247
Score = 68 (29.0 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDV 451
C ++ +G+ F+T S D R+W CK+S +Q E+DV+ EN+V
Sbjct: 889 CVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQ---EIDVVF-QENEV 937
Score = 66 (28.3 bits), Expect = 8.5e-12, Sum P(3) = 8.5e-12
Identities = 25/111 (22%), Positives = 44/111 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L N +L+ D + VWN + + H + D+ + + S D +
Sbjct: 1055 LKNSRLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFS-STSADKTAKI 1113
Query: 615 WDIWEGTPIRIYEIGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W +P+ +E+ K + FS + T + DD G+I + N GE
Sbjct: 1114 WSFELLSPL--HELRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSNGE 1162
Score = 57 (25.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H+ + C +++ N T+ TG + R+W+ + PI + + H V
Sbjct: 1125 LRGHKGCVRCSSFSVNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVT 1184
Query: 453 YVQFS 457
+ FS
Sbjct: 1185 DLCFS 1189
Score = 53 (23.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 24/112 (21%), Positives = 47/112 (41%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S N + A+ + +W+ G V GH + + + P S+ D +T
Sbjct: 850 FSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSS--DDQT 907
Query: 613 IVWDIWEGTPIRIYEIGRFKL-VDGKFSPDGTSIVLSDDVGQIYLLN--TGQ 661
I +WE + K +D F + +++ D++ ++ L+N TGQ
Sbjct: 908 I--RLWETKKVCKNSATVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQ 957
Score = 46 (21.3 bits), Expect = 8.9e-10, Sum P(3) = 8.9e-10
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-NPRIAMSA 606
V I ++ D + ++++ D + +WN L H + V D N R+ +S
Sbjct: 1008 VRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFF-LQAHQET--VKDFRLLKNSRL-LSW 1063
Query: 607 GYDGRTIVWDI 617
+DG VW+I
Sbjct: 1064 SFDGTVKVWNI 1074
Score = 43 (20.2 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 637 KFSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRD 684
+F+ DG +++ S D + + N Q E D FFL ++ ++D
Sbjct: 1012 QFTADGKTLISSSDDSAVQIWNW-QSE-------DPFFLQAHQETVKD 1051
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 183 (69.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 35/101 (34%), Positives = 55/101 (54%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH V C F SG +I+ S D+ +K+W T +C+ + GHE + + VS
Sbjct: 183 VKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSE 242
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
+ + +AS SND I+ W + G ++ R H+ V +AFS
Sbjct: 243 DGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFS 283
Score = 174 (66.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR+ + F S +++ S+D +K+W E+ + +GH + D+
Sbjct: 102 LTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGN 161
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W + L GH V+ + F+P QL+SSS D T ++W+
Sbjct: 162 LLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGD---QLISSSRDKTIKVWE 218
Query: 359 A 359
A
Sbjct: 219 A 219
Score = 163 (62.4 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 37/122 (30%), Positives = 62/122 (50%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH +AV FD++G + + S D +K+W +T C+ + GH+ +++ + + +
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS 201
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D I+VW G I L GH V I S S I S S+D T +
Sbjct: 202 GDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCI---ASCSNDQTIKT 258
Query: 357 WD 358
W+
Sbjct: 259 WN 260
Score = 95 (38.5 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+ S D I++W L G ++ GH V A+ F P LLS DD T R+WD
Sbjct: 319 LATGSRDKTIKIWELATGRCLATYIGHDNWVRAVRFHPCGKF---LLSVGDDKTIRVWD 374
Score = 88 (36.0 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
IK L GH D V G + + S+D+ +K W++ CLA+ R H + LA S+
Sbjct: 225 IKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFST 284
Query: 296 NNTL 299
N +
Sbjct: 285 ANII 288
Score = 67 (28.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIR 624
D I +W G + + GH + HP + +S G D +TI VWDI +G I+
Sbjct: 325 DKTIKIWELATGRCLATYIGHDNWVRAVRFHPCG-KFLLSVG-DDKTIRVWDIAQGRCIK 382
Score = 59 (25.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLT-GHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
+F+L+ D I VW+ G + ++ H+ LD NP IA + G D VW
Sbjct: 359 KFLLSVGDDKTIRVWDIAQGRCIKTINEAHTHFISCLDFCLHNPHIA-TGGVDDVIKVWK 417
Query: 617 I 617
+
Sbjct: 418 L 418
Score = 55 (24.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 18/67 (26%), Positives = 28/67 (41%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
++++ D I VW A G + +L GH + V IA S D W+I +
Sbjct: 205 LISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIA-SCSNDQTIKTWNIVK 263
Query: 620 GTPIRIY 626
G + Y
Sbjct: 264 GECLATY 270
Score = 42 (19.8 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V I S D + + D I WN V G + + HS
Sbjct: 235 VRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHS 274
Score = 39 (18.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVW 424
+H I C + + TG D +VW
Sbjct: 389 THFISCLDFCLHNPHIATGGVDDVIKVW 416
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 183 (69.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 42/123 (34%), Positives = 63/123 (51%)
Query: 237 KKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
K L+GH D V C F SG +++GSDD +K+WS CL + GH G + +S
Sbjct: 988 KVLKGHDDHVITCLQF--SGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSG 1045
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N ++ S S D ++VW + G + L+GHT V + +++S S D T R
Sbjct: 1046 N--IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGS-----KVVSGSRDATLR 1098
Query: 356 IWD 358
+WD
Sbjct: 1099 VWD 1101
Score = 181 (68.8 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 40/137 (29%), Positives = 73/137 (53%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++ + + L+GH + VY FD G V++GS D +++W +ET C + GH+ +
Sbjct: 1143 ERQECLHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSG 1200
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRG---HTGAVTAIAFSPRPSAIYQLLS 347
+ + N ++ S + D ++VW + G + L G H AVT + F+ R +++
Sbjct: 1201 MELRQN--ILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSR-----FVVT 1253
Query: 348 SSDDGTCRIWDARYSQY 364
SSDDGT ++WD + +
Sbjct: 1254 SSDDGTVKLWDVKTGDF 1270
Score = 169 (64.5 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 64/280 (22%), Positives = 115/280 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH V+ + SG +I+GS DR +K+W M++ C+ + +GH + + +
Sbjct: 1028 LRTLVGHTGGVWSS--QMSGNIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHG 1085
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ V S S D +RVW + G + VL GH AV + + + ++S + D +
Sbjct: 1086 SK--VVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGK-----LIVSGAYDYMVK 1138
Query: 356 IWDARYSQ-------YSPRIYLPKPPD--AITGKXXXXXXXXXXXXX----XLQSHQILC 402
IW + ++ R+Y + ++G L HQ L
Sbjct: 1139 IWHPERQECLHTLQGHTNRVYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLT 1198
Query: 403 CAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVA 462
+ V+G++D+ +VW Q + L + H + V +QF+ V
Sbjct: 1199 SGMELRQNILVSGNADSTVKVWDITTG------QCLQTLSGPNKHHSAVTCLQFNSRFVV 1252
Query: 463 SRSAMSDAFKEENVPKFKNSWFCHDNIVTCSRDGSA-IIW 501
+ S+ K +V K F N+V GS ++W
Sbjct: 1253 T-SSDDGTVKLWDV---KTGDFIR-NLVALDSGGSGGVVW 1287
Score = 82 (33.9 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+SL D V++ +D I VW+ G+ H+L GH + + +++ I +S D
Sbjct: 1158 VYSLQFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ---NILVSGNAD 1214
Query: 610 GRTIVWDIWEG 620
VWDI G
Sbjct: 1215 STVKVWDITTG 1225
Score = 77 (32.2 bits), Expect = 8.5e-12, Sum P(2) = 8.5e-12
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L +++ D + VW+ G + +L+G + + FN R +++ DG +
Sbjct: 1203 LRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFNSRFVVTSSDDGTVKL 1262
Query: 615 WDIWEGTPIR 624
WD+ G IR
Sbjct: 1263 WDVKTGDFIR 1272
Score = 69 (29.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D + +++ D + +W+ +H+L GH+ Y L F+ +S D VW
Sbjct: 1124 DGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQ---FDGLHVVSGSLDTSIRVW 1180
Query: 616 DIWEG 620
D+ G
Sbjct: 1181 DVETG 1185
Score = 40 (19.1 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSL 583
++RFV+ + D + +W+ G + +L
Sbjct: 1247 NSRFVVTSSDDGTVKLWDVKTGDFIRNL 1274
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 171 (65.3 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ET + GH GD+ L+++ +
Sbjct: 37 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 95
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
L S + D ++W + +G+ GH + AI F P +A + SDD TCR+
Sbjct: 96 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRL 152
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 153 FDLRADQ 159
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 33/133 (24%), Positives = 55/133 (41%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q GH V R ++G+ D K+W + C + GHE DI
Sbjct: 71 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 130
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTG---AVTAIAFSPRPSAIYQLL 346
+ N A+ S+D R++ L + H +T+++FS + + LL
Sbjct: 131 AICFFPNGNAFATGSDDATCRLFDLRADQELMTY-SHDNIICGITSVSFS-KSGRL--LL 186
Query: 347 SSSDDGTCRIWDA 359
+ DD C +WDA
Sbjct: 187 AGYDDFNCNVWDA 199
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 56/243 (23%), Positives = 98/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I++++T GH G ++ +N +V S
Sbjct: 3 CA-YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 60
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 61 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDVREGM 117
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG SH + C +
Sbjct: 118 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 177
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW A K+ VL+GH+N V+ V G AVA
Sbjct: 178 FSKSGRLLLAGYDDFNCNVWDALKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 228
Query: 463 SRS 465
+ S
Sbjct: 229 TGS 231
Score = 53 (23.7 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ L GH L V +A +
Sbjct: 173 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 231
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 232 WDSFLKIWN 240
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 164 (62.8 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 41/128 (32%), Positives = 65/128 (50%)
Query: 239 LRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ GH + A F S ++TGS D ++W +T +A+ +GH ++ +A + +
Sbjct: 130 MNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDA 189
Query: 298 TLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP---RP-SAIYQLLSSSDDG 352
+++A+ S D IR W G PI LR HT + A+ + P P S Y L S S D
Sbjct: 190 SIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDN 249
Query: 353 TCRIWDAR 360
T RIW+ +
Sbjct: 250 TVRIWNVK 257
Score = 157 (60.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 40/122 (32%), Positives = 59/122 (48%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I K+ GH+ V A F GR + T S D V++W +T LA+ RGH + A S+
Sbjct: 382 ITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWST 441
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
++ L+ S+S D ++VW + L GH V A+ +SP + S D R
Sbjct: 442 DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRV---ASGGADKAVR 498
Query: 356 IW 357
IW
Sbjct: 499 IW 500
Score = 146 (56.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 243 RDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAF-------CLASCRGHEGDITDLAVS- 294
+D +Y ++F +G + ++D L +++ + F C AS GH+G I S
Sbjct: 89 QDNLYTSVF-HNG---LMKTEDHLTLLYTPQAVFRVRAVTRCTASMNGHDGTIISAQFSP 144
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
S ++ + + S DF R+W PI+ ++GHT V+ +A++P S I + S D T
Sbjct: 145 STSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASII---ATGSMDNTI 201
Query: 355 RIWDAR 360
R WD +
Sbjct: 202 RFWDPK 207
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 247 YCAIFDRSGRFVITGSDDRLVKIWS-METAFCLASCRGHEGDITDLAVSSNNTLVASASN 305
Y A +SG +++ SDD + +W ++ + GH+ + + S + +A+AS
Sbjct: 350 YEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASF 409
Query: 306 DFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
D +R+W G ++ LRGH AV A+S S + L+SSS D T ++WD R
Sbjct: 410 DSSVRLWDGKTGKFLATLRGHVAAVYQCAWST-DSRL--LVSSSQDTTLKVWDVR 461
Score = 137 (53.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 40/133 (30%), Positives = 60/133 (45%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASC-RGHEGDIT----- 289
I ++GH + V C + + TGS D ++ W + + R H I
Sbjct: 170 IATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQ 229
Query: 290 --DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
LA S L+AS S D +R+W + + L GHT +T + + + + IY S
Sbjct: 230 PLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQ-NWIY---S 285
Query: 348 SSDDGTCRIWDAR 360
SS D T RIWDA+
Sbjct: 286 SSYDKTIRIWDAK 298
Score = 124 (48.7 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 66/264 (25%), Positives = 103/264 (39%)
Query: 277 CLASCRGHEGDITDLAVS-SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAF 335
C AS GH+G I S S ++ + + S DF R+W PI+ ++GHT V+ +A+
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW 185
Query: 336 SPRPSAIYQLLSSSDDGTCRIWDARYSQ---------YSPRIYLP-KP----PDA----- 376
+P S I + S D T R WD + P + L +P PD+
Sbjct: 186 APDASII---ATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLL 242
Query: 377 ITGKXXXXXXX----XXXXXXXLQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSS 430
+G L H I C + ++ + S D R+W A
Sbjct: 243 ASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIY-SSSYDKTIRIWDA---- 297
Query: 431 VEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDA-FKEENVP----KFKNSW-F 484
+D + L +L GH VN++ S V A FK ++ K K +
Sbjct: 298 -KDGKC----LHILKGHAARVNHLSLSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYEA 352
Query: 485 C----HDNIVTCSRDGSAIIWIPR 504
C + +V+ S D I+W P+
Sbjct: 353 CLKQSGERLVSASDDLQLILWDPQ 376
Score = 119 (46.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 254 SGRFVI-TGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
SG +++ +GS D V+IW+++ L + GH IT + N + +S S D IR+W
Sbjct: 237 SGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSS-SYDKTIRIW 295
Query: 313 RLPDGLPISVLRGHTGAVTAIAFS 336
DG + +L+GH V ++ S
Sbjct: 296 DAKDGKCLHILKGHAARVNHLSLS 319
Score = 89 (36.4 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 19/68 (27%), Positives = 31/68 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V WS D+R ++++ D + VW+ + L GH + +D P R+A S G
Sbjct: 434 VYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVA-SGG 492
Query: 608 YDGRTIVW 615
D +W
Sbjct: 493 ADKAVRIW 500
Score = 82 (33.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN +S D R + A D + +W+ G + +L GH A+ Y + R+ +S+
Sbjct: 392 VNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQC-AWSTDSRLLVSSS 450
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 451 QDTTLKVWDV 460
Score = 70 (29.7 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + W N ++ ++ D I +W+A DG +H L GH+A L + + S
Sbjct: 272 ITCVRWGGQN-WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLS--TEHVLRSGA 328
Query: 608 YD 609
YD
Sbjct: 329 YD 330
Score = 60 (26.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 559 FVLAA-IMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
++LA+ D + +WN +L+ +L+GH+A + V S+ YD +WD
Sbjct: 240 YLLASGSKDNTVRIWNVKLRTLLFTLSGHTAP--ITCVRWGGQNWIYSSSYDKTIRIWDA 297
Query: 618 WEGTPIRI 625
+G + I
Sbjct: 298 KDGKCLHI 305
Score = 44 (20.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/116 (24%), Positives = 49/116 (42%)
Query: 408 NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS--GCAVASRS 465
+G V+ S D +W KS+ +PI ++ GH+ VN+ FS G +A+ S
Sbjct: 357 SGERLVSASDDLQLILWDPQKST-----KPITKMH---GHQKVVNHASFSPDGRCIATAS 408
Query: 466 AMSDA-FKEENVPKF------------KNSWFCHDNI-VTCSRDGSAIIWIPRSRR 507
S + KF + +W + V+ S+D + +W RS++
Sbjct: 409 FDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKK 464
Score = 39 (18.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 12/46 (26%), Positives = 15/46 (32%)
Query: 58 HFLSSGPCQRTXXXXXXXXXXXXXXPRRYHAWFSRSGVNSGNDNDD 103
H L SG T RY A +SG + +DD
Sbjct: 322 HVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDD 367
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 182 (69.1 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 60/255 (23%), Positives = 113/255 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K + + L GH V+ + + GR++++GS DR VK+WS L + +GH +
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR 342
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+A++ + ++ + S D +RVW + G ++ L GH AV + F ++S
Sbjct: 343 CMAMAGS--ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT-----VVSGG 395
Query: 350 DDGTCRIWDARYSQ-------YSPRIY--LPKPPDAI--TGKXXXXXXXXXXXX------ 392
D T +IW+A + ++ R+Y L + +I +G
Sbjct: 396 YDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
Query: 393 -XXLQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
LQ H L G + V+ ++D+ RVW + + +H +LSGH + +
Sbjct: 456 VALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTC------VH---MLSGHRSAI 506
Query: 452 NYVQFSGCAVASRSA 466
+Q+ G + + S+
Sbjct: 507 TSLQWFGRNMVATSS 521
Score = 173 (66.0 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM---ETAFCLASCRGHEGDITDLA 292
I+ L GH + VY +F+ V +GS D +++W E C+A +GH + +
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ N ++ S + D +RVW + +G + +L GH A+T++ + R + +SSDDG
Sbjct: 471 LRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN----MVATSSDDG 524
Query: 353 TCRIWD 358
T ++WD
Sbjct: 525 TVKLWD 530
Score = 168 (64.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 38/126 (30%), Positives = 62/126 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
LRGH D V + ++TGSDD +K+W ++ + + GH G + +S
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ S S D ++VW DG + L+GHT V +A + +I L++ S D T R+WD
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA---GSI--LVTGSRDTTLRVWD 364
Query: 359 ARYSQY 364
++
Sbjct: 365 VESGRH 370
Score = 104 (41.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 45/156 (28%), Positives = 67/156 (42%)
Query: 209 KHHRAPS--VCSACY--AIAKPSTMVQKMQNIKKLRGHRDAV---YCAIFDRSGRFVITG 261
KHH P+ V A AIA T+ +Q L HR + IF+R+
Sbjct: 173 KHHPDPTDRVTGAWQGTAIAAGVTIPDHIQPCD-LNVHRFLKLQKFGDIFERAADKSRYL 231
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
D++ K W+ A RGHE + ++ LV + S+D ++VW + G +
Sbjct: 232 RADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMY 290
Query: 322 VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
L GHTG V S Y ++S S D T ++W
Sbjct: 291 TLVGHTGGVWTSQISQ--CGRY-IVSGSTDRTVKVW 323
Score = 93 (37.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
R++++ D + VW+ VDGSL+H+L GH+++ + + I ++ D VWD+
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG---SILVTGSRDTTLRVWDV 365
Query: 618 WEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLS--DDVGQIYLLNTGQ 661
G + G V +F DGT++V D +I+ +TG+
Sbjct: 366 ESGRHLATLH-GHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGR 409
Score = 87 (35.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L +++ D + VW+ +G+ VH L+GH ++ + + F + ++ DG +
Sbjct: 471 LRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA--ITSLQWFGRNMVATSSDDGTVKL 528
Query: 615 WDIWEGTPIR 624
WDI G IR
Sbjct: 529 WDIERGALIR 538
Score = 74 (31.1 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D V++ D + +WNA G + +LTGH+ Y L + I S D VW
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDTSIRVW 445
Query: 616 D 616
D
Sbjct: 446 D 446
Score = 64 (27.6 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIR 624
D + VW+ G + +L GH A+ + F+ +S GYD +W+ G IR
Sbjct: 357 DTTLRVWDVESGRHLATLHGHHAAVRCVQ---FDGTTVVSGGYDFTVKIWNAHTGRCIR 412
Score = 54 (24.1 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 24/118 (20%), Positives = 48/118 (40%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
++++ + + ++ +GS DT RVW + ++ + +L GH + + +Q
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC------VALLQGHTSLTSGMQL 471
Query: 457 SGCAVASRSAMS-----DAFKEENVPKFKN--------SWFCHDNIVTCSRDGSAIIW 501
G + S +A S D + V WF + + T S DG+ +W
Sbjct: 472 RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 182 (69.1 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 60/255 (23%), Positives = 113/255 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K + + L GH V+ + + GR++++GS DR VK+WS L + +GH +
Sbjct: 283 IDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR 342
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+A++ + ++ + S D +RVW + G ++ L GH AV + F ++S
Sbjct: 343 CMAMAGS--ILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQFDGTT-----VVSGG 395
Query: 350 DDGTCRIWDARYSQ-------YSPRIY--LPKPPDAI--TGKXXXXXXXXXXXX------ 392
D T +IW+A + ++ R+Y L + +I +G
Sbjct: 396 YDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC 455
Query: 393 -XXLQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
LQ H L G + V+ ++D+ RVW + + +H +LSGH + +
Sbjct: 456 VALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTC------VH---MLSGHRSAI 506
Query: 452 NYVQFSGCAVASRSA 466
+Q+ G + + S+
Sbjct: 507 TSLQWFGRNMVATSS 521
Score = 173 (66.0 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 38/126 (30%), Positives = 67/126 (53%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM---ETAFCLASCRGHEGDITDLA 292
I+ L GH + VY +F+ V +GS D +++W E C+A +GH + +
Sbjct: 411 IRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQ 470
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ N ++ S + D +RVW + +G + +L GH A+T++ + R + +SSDDG
Sbjct: 471 LRGN--ILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRN----MVATSSDDG 524
Query: 353 TCRIWD 358
T ++WD
Sbjct: 525 TVKLWD 530
Score = 168 (64.2 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 38/126 (30%), Positives = 62/126 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
LRGH D V + ++TGSDD +K+W ++ + + GH G + +S
Sbjct: 251 LRGHEDHVITCMQIHDD-VLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGR 309
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ S S D ++VW DG + L+GHT V +A + +I L++ S D T R+WD
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA---GSI--LVTGSRDTTLRVWD 364
Query: 359 ARYSQY 364
++
Sbjct: 365 VESGRH 370
Score = 104 (41.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 45/156 (28%), Positives = 67/156 (42%)
Query: 209 KHHRAPS--VCSACY--AIAKPSTMVQKMQNIKKLRGHRDAV---YCAIFDRSGRFVITG 261
KHH P+ V A AIA T+ +Q L HR + IF+R+
Sbjct: 173 KHHPDPTDRVTGAWQGTAIAAGVTIPDHIQPCD-LNVHRFLKLQKFGDIFERAADKSRYL 231
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
D++ K W+ A RGHE + ++ LV + S+D ++VW + G +
Sbjct: 232 RADKIEKNWNANPIMGSAVLRGHEDHVITCMQIHDDVLV-TGSDDNTLKVWCIDKGEVMY 290
Query: 322 VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
L GHTG V S Y ++S S D T ++W
Sbjct: 291 TLVGHTGGVWTSQISQ--CGRY-IVSGSTDRTVKVW 323
Score = 93 (37.8 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 30/107 (28%), Positives = 54/107 (50%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
R++++ D + VW+ VDGSL+H+L GH+++ + + I ++ D VWD+
Sbjct: 309 RYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMAG---SILVTGSRDTTLRVWDV 365
Query: 618 WEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLS--DDVGQIYLLNTGQ 661
G + G V +F DGT++V D +I+ +TG+
Sbjct: 366 ESGRHLATLH-GHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGR 409
Score = 87 (35.7 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L +++ D + VW+ +G+ VH L+GH ++ + + F + ++ DG +
Sbjct: 471 LRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSA--ITSLQWFGRNMVATSSDDGTVKL 528
Query: 615 WDIWEGTPIR 624
WDI G IR
Sbjct: 529 WDIERGALIR 538
Score = 74 (31.1 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D V++ D + +WNA G + +LTGH+ Y L + I S D VW
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSL-LFESERSIVCSGSLDTSIRVW 445
Query: 616 D 616
D
Sbjct: 446 D 446
Score = 64 (27.6 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIR 624
D + VW+ G + +L GH A+ + F+ +S GYD +W+ G IR
Sbjct: 357 DTTLRVWDVESGRHLATLHGHHAAVRCVQ---FDGTTVVSGGYDFTVKIWNAHTGRCIR 412
Score = 54 (24.1 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 24/118 (20%), Positives = 48/118 (40%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
++++ + + ++ +GS DT RVW + ++ + +L GH + + +Q
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQEC------VALLQGHTSLTSGMQL 471
Query: 457 SGCAVASRSAMS-----DAFKEENVPKFKN--------SWFCHDNIVTCSRDGSAIIW 501
G + S +A S D + V WF + + T S DG+ +W
Sbjct: 472 RGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKLW 529
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 199 (75.1 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 62/242 (25%), Positives = 108/242 (44%)
Query: 234 QNIKKLRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ + L GHR+ VY F+ G + TGS D+ K+WS ET C + RGH +I L+
Sbjct: 125 EELHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLS 184
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
+ +T+VA+ S D ++W + G + L GH + +++F I ++ S D
Sbjct: 185 FNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI---ITGSFDH 241
Query: 353 TCRIWDA-----------RYSQYSPRIYLPKPPDAITGKXXXX----XXXXXXXXXXLQS 397
T +WDA ++ S ++ +TG L
Sbjct: 242 TVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTG 301
Query: 398 H--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
H +IL ++ G + T S+D ARV++A + + I +L+ GHE +++ +
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARVYNAT------TRKCITKLE---GHEGEISKIS 352
Query: 456 FS 457
F+
Sbjct: 353 FN 354
Score = 192 (72.6 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 35/122 (28%), Positives = 66/122 (54%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+ L GH D + + FD +G+ + T S D ++++ T C+ GHEG+I+ ++ +
Sbjct: 296 VATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNP 355
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ + S+D R+W + G + VL GHT + + AF+ + + + ++ S D +CR
Sbjct: 356 QGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIV---ITGSKDNSCR 412
Query: 356 IW 357
IW
Sbjct: 413 IW 414
Score = 188 (71.2 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 41/130 (31%), Positives = 67/130 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + L GH + A+F ++TGS D+ +W + C+A+ GH+ +I D
Sbjct: 252 RKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCF 311
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
L+A+AS D RV+ I+ L GH G ++ I+F+P+ + +LL+ S D T
Sbjct: 312 DYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGN---RLLTGSSDKT 368
Query: 354 CRIWDARYSQ 363
RIWD + Q
Sbjct: 369 ARIWDVQTGQ 378
Score = 152 (58.6 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 55/230 (23%), Positives = 92/230 (40%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
RGH + C F+ V TGS D K+W +++ + + GH +I L+ ++
Sbjct: 174 RGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDR 233
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ-------LLSSSDDG 352
+ + S D + VW G + L GH +++ FS S I +L + G
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSG 293
Query: 353 TC---------RIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQ--IL 401
C I D+ + Y+ ++ D G L+ H+ I
Sbjct: 294 KCVATLTGHDDEILDSCFD-YTGKLIATASAD---GTARVYNATTRKCITKLEGHEGEIS 349
Query: 402 CCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDV 451
++N G +TGSSD AR+W V+ + L VL GH +++
Sbjct: 350 KISFNPQGNRLLTGSSDKTARIWD-----VQTGQC----LQVLEGHTDEI 390
Score = 141 (54.7 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 35/125 (28%), Positives = 59/125 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K LR H + +++G ITGS DR K+W + L + GH + A++ N
Sbjct: 86 KVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVV--YAIAFN 143
Query: 297 NTL---VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
N +A+ S D ++W G RGHT + ++F+P+ + + + S D T
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVV---ATGSMDTT 200
Query: 354 CRIWD 358
++WD
Sbjct: 201 AKLWD 205
Score = 134 (52.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I KL GH + F+ G ++TGS D+ +IW ++T CL GH +I A +
Sbjct: 338 ITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNY 397
Query: 296 NNTLVASASNDFVIRVWR 313
+V + S D R+WR
Sbjct: 398 KGNIVITGSKDNSCRIWR 415
Score = 110 (43.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 47/204 (23%), Positives = 83/204 (40%)
Query: 282 RGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
R H +T++A++ + + S D +VW G + L GH V AIAF+ P
Sbjct: 89 RAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN-NPYG 147
Query: 342 IYQLLSSSDDGTCRIWDAR-------YSQYSPRI----YLPKPPDAITGKXXXXXXX--- 387
++ + S D TC++W A + ++ I + P+ TG
Sbjct: 148 D-KIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDI 206
Query: 388 -XXXXXXXLQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVL 444
L H +I+ +++ +G +TGS D VW A + + +H L
Sbjct: 207 QSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVWDA------STGRKVH---TL 257
Query: 445 SGHENDVNYVQFS-GCAVASRSAM 467
GH +++ FS C++ +M
Sbjct: 258 IGHCAEISSALFSWDCSLILTGSM 281
Score = 98 (39.6 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD-VHPFNPRIAMSA 606
++ ++S D +L MD +W+A G V +LTGH +LD + ++ +A
Sbjct: 264 ISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHDDE--ILDSCFDYTGKLIATA 321
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVL--SDDVGQIYLLNTGQGES 664
DG V++ I E ++ F+P G ++ SD +I+ + TGQ
Sbjct: 322 SADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQ 381
Query: 665 QKDAKYDQFF 674
+ D+ F
Sbjct: 382 VLEGHTDEIF 391
Score = 79 (32.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 27/99 (27%), Positives = 43/99 (43%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
V MD +W+ G V +LTGH A L RI ++ +D +VWD
Sbjct: 192 VATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDAST 250
Query: 620 GTPIRIYEIGRF-KLVDGKFSPDGTSIVLSDDVGQIYLL 657
G + IG ++ FS D S++L+ + + +L
Sbjct: 251 GRKVHTL-IGHCAEISSALFSWD-CSLILTGSMDKTCML 287
Score = 75 (31.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSAS-SYVLDVHPFNPRIAMSAGYDGRTIVWDIW 618
++ D + VW+A G VH+L GH A S L ++ + ++ D ++WD
Sbjct: 234 IITGSFDHTVVVWDASTGRKVHTLIGHCAEISSAL--FSWDCSLILTGSMDKTCMLWDAT 291
Query: 619 EGTPIRIYEIGRFKLVDGKFSPDGTSIVLS--DDVGQIYLLNT 659
G + +++D F G I + D ++Y T
Sbjct: 292 SGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATT 334
Score = 63 (27.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 17/89 (19%), Positives = 36/89 (40%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
+ + A D V+NA + L GH + +P R+ ++ D +WD+
Sbjct: 316 KLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRL-LTGSSDKTARIWDV 374
Query: 618 WEGTPIRIYEIGRFKLVDGKFSPDGTSIV 646
G +++ E ++ F+ G ++
Sbjct: 375 QTGQCLQVLEGHTDEIFSCAFNYKGNIVI 403
Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 29/125 (23%), Positives = 54/125 (43%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS- 457
+I+ +++ +G +TGS D VW A + + +H L GH +++ FS
Sbjct: 221 EIISLSFDTSGDRIITGSFDHTVVVWDA------STGRKVH---TLIGHCAEISSALFSW 271
Query: 458 GCAVASRSAMS------DAFKEENVP-------KFKNSWFCHDN--IVTCSRDGSAIIWI 502
C++ +M DA + V + +S F + I T S DG+A ++
Sbjct: 272 DCSLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYN 331
Query: 503 PRSRR 507
+R+
Sbjct: 332 ATTRK 336
Score = 43 (20.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 30/119 (25%), Positives = 54/119 (45%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS- 457
+IL ++ G + T S+D ARV++A + + I +L+ GHE +++ + F+
Sbjct: 305 EILDSCFDYTGKLIATASADGTARVYNAT------TRKCITKLE---GHEGEISKISFNP 355
Query: 458 -GCAVASRSAMSDA------------FKEENVPKFKNSWFCHD-NIV-TCSRDGSAIIW 501
G + + S+ A E + + + F + NIV T S+D S IW
Sbjct: 356 QGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 180 (68.4 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 41/127 (32%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +WS+ C A+ +GH G + +L
Sbjct: 60 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVY-GDCDNYATLKGHSGAVMELHY 118
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 119 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 176
Query: 354 CRIWDAR 360
++WD R
Sbjct: 177 VKLWDIR 183
Score = 162 (62.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 143 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAIQTFQNTYQVLA 199
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 256
Query: 351 DGTCRIWDARYSQYSPR 367
D T R+WD R ++P+
Sbjct: 257 DNTVRVWDVR--PFAPK 271
Score = 128 (50.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 102 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 161
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + I + +T V A+ F+ Q++S D
Sbjct: 162 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 217
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 218 IKVWDLRQNKLTYTMRGHA----DSVTG 241
Score = 68 (29.0 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D VWD+
Sbjct: 209 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 267
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSI 645
P ++I++ + F+ L+ +SPDG+ I
Sbjct: 268 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 301
Score = 55 (24.4 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQ-PIHEL 441
+L C+++ +G+ GS+D+F W + SV Q P H L
Sbjct: 289 LLRCSWSPDGSKIAAGSADSFLYPWHSL--SVRSLGQIPRHRL 329
Score = 45 (20.9 bits), Expect = 7.5e-10, Sum P(3) = 7.5e-10
Identities = 15/65 (23%), Positives = 25/65 (38%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS D + A D + W+++ + + H S V P +SA D R
Sbjct: 294 WSPDGSKIAAGSADSFLYPWHSLSVRSLGQIPRHRLSRQEDSVKPQEGIXILSASSDKRL 353
Query: 613 IVWDI 617
+ +I
Sbjct: 354 YMGEI 358
Score = 39 (18.8 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 170 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 212
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 174 (66.3 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 45/132 (34%), Positives = 70/132 (53%)
Query: 227 STMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEG 286
ST QK + L H + V CA F GR +++ SDD+ VK+W + C+ S H G
Sbjct: 131 STHRQKF--LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 287 DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+T + + T +A+AS D ++VW + + + H+ AV A++F PS Y LL
Sbjct: 189 FVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF--HPSGNY-LL 245
Query: 347 SSSDDGTCRIWD 358
++S D T +I D
Sbjct: 246 TASSDSTLKILD 257
Score = 152 (58.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 37/129 (28%), Positives = 65/129 (50%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GHRDA+ F + + + +GS D + +W M+ GH+ +T + S +
Sbjct: 13 RHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPS 72
Query: 297 NTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
L+AS S D +R+W +P+ S V R HT V ++ F S L+++SDD T +
Sbjct: 73 GHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFC---SDGQSLVTASDDKTVK 128
Query: 356 IWDARYSQY 364
+W ++
Sbjct: 129 VWSTHRQKF 137
Score = 152 (58.6 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 63/249 (25%), Positives = 97/249 (38%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ GH+DAV C F SG + +GS D+ V+IW R H + + S+
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+ +AS+D ++VW + L H V FSP I +S+SDD T ++W
Sbjct: 116 QSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLI---VSASDDKTVKLW 172
Query: 358 D--AR-----YSQYSPRI-YLPKPPD----AITGKXXXXXXXXXXXXXXLQSHQILCCAY 405
D +R Y ++ + Y+ P A LQ +Q+ A
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 406 NA-----NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCA 460
NA +G +T SSD+ ++ + + L L GH+ V FS
Sbjct: 233 NALSFHPSGNYLLTASSDSTLKILDLMEGRL---------LYTLHGHQGPATTVAFSRTG 283
Query: 461 VASRSAMSD 469
S SD
Sbjct: 284 EYFASGGSD 292
Score = 98 (39.6 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 26/110 (23%), Positives = 48/110 (43%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++A D + +W+ VHS H +D HP IA +A D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA-AASMDNTV 211
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWD+ ++ Y++ + F P G ++ + + +L+ +G
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEG 261
Score = 63 (27.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + ++L A D + + + ++G L+++L GH + + A S G
Sbjct: 232 VNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 42 (19.8 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 637 KFSPDGTSIV-LSDD 650
+FSPDG IV SDD
Sbjct: 152 RFSPDGRLIVSASDD 166
Score = 38 (18.4 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 7/49 (14%), Positives = 22/49 (44%)
Query: 1416 SWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSING 1464
++L+ + + + + + ++Y+ GHQ + G +++ G
Sbjct: 242 NYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
>UNIPROTKB|P49027 [details] [associations]
symbol:RACK1A "Guanine nucleotide-binding protein subunit
beta-like protein A" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0050832 "defense response to fungus" evidence=IMP] [GO:0060267
"positive regulation of respiratory burst" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005737 GO:GO:0009507 GO:GO:0046686
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0050832 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048364 GO:GO:0004871 GO:GO:0048367
GO:GO:0022626 EMBL:AP008207 EMBL:CM000138 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM ProtClustDB:CLSN2682135 EMBL:D38231
EMBL:AP003452 EMBL:AK060428 EMBL:AK098893 EMBL:AK121587 PIR:T03764
RefSeq:NP_001043910.1 UniGene:Os.4684 ProteinModelPortal:P49027
SMR:P49027 STRING:P49027 PRIDE:P49027
EnsemblPlants:LOC_Os01g49290.1 GeneID:4324115
KEGG:dosa:Os01t0686800-02 KEGG:osa:4324115 Gramene:P49027
GO:GO:0060267 Uniprot:P49027
Length = 334
Score = 153 (58.9 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 37/128 (28%), Positives = 63/128 (49%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH V + G+F ++GS D +++W + T GH+ D+ +A S +
Sbjct: 69 RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVD 128
Query: 297 NTLVASASNDFVIRVWR-LPD-----GLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
N + SAS D I++W L + G + GH G V+ + FSP ++S S
Sbjct: 129 NRQIVSASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQP-TIVSGSW 187
Query: 351 DGTCRIWD 358
D T ++W+
Sbjct: 188 DRTVKVWN 195
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 36/120 (30%), Positives = 60/120 (50%)
Query: 241 GHRDAVYCAIFDRSG--RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
GH V C F + +++GS DR VK+W++ + GH G + +AVS + +
Sbjct: 163 GHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSPDGS 222
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L AS D V +W L +G + L + + ++ FSP Y L +++ D + +IWD
Sbjct: 223 LCASGGKDGVTLLWDLAEGKRLYSLDAGS-IIHSLCFSPNR---YWLCAATQD-SIKIWD 277
Score = 103 (41.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 35/136 (25%), Positives = 58/136 (42%)
Query: 239 LRGHRDAVYCAI--FDRSGRFVITGSDDRLVKIWSM--------------ETAFCLASCR 282
+ GH D V D S F+++ S D+ + +W + E
Sbjct: 14 MHGHNDVVTAIATPIDNSP-FIVSSSRDKSLLVWDLTNPVQNVGEGAGASEYGVPFRRLT 72
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
GH + D+ +SS+ S S D +R+W L G+ GH V ++AFS
Sbjct: 73 GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSTGVTTRRFVGHDKDVLSVAFSVDNR-- 130
Query: 343 YQLLSSSDDGTCRIWD 358
Q++S+S D T ++W+
Sbjct: 131 -QIVSASRDRTIKLWN 145
Score = 93 (37.8 bits), Expect = 3.8e-12, Sum P(2) = 3.8e-12
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ D + VWN + L +L GH + V P + + S G DG T++WD+ E
Sbjct: 182 IVSGSWDRTVKVWNLTNCKLRCNLEGHGGYVNAVAVSP-DGSLCASGGKDGVTLLWDLAE 240
Query: 620 GTPIRIYEIGRFKLVDGK-FSPD 641
G R+Y + ++ FSP+
Sbjct: 241 GK--RLYSLDAGSIIHSLCFSPN 261
Score = 69 (29.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 32/124 (25%), Positives = 56/124 (45%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSL-------TGHSA--SSYVLDVHPFNPR 601
+ +S+DNR +++A D I +WN + G +++ GH+ S + F P
Sbjct: 123 VAFSVDNRQIVSASRDRTIKLWNTL-GECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPT 181
Query: 602 IAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNT 659
I +S +D RT+ VW++ +R G V+ SPDG+ G L +
Sbjct: 182 I-VSGSWD-RTVKVWNL-TNCKLRCNLEGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDL 238
Query: 660 GQGE 663
+G+
Sbjct: 239 AEGK 242
Score = 44 (20.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 17/71 (23%), Positives = 30/71 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP-RIAMSA 606
VN + S D + D +W+ +G ++SL A S + + F+P R + A
Sbjct: 212 VNAVAVSPDGSLCASGGKDGVTLLWDLAEGKRLYSL---DAGSIIHSLC-FSPNRYWLCA 267
Query: 607 GYDGRTIVWDI 617
+WD+
Sbjct: 268 ATQDSIKIWDL 278
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 167 (63.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 43/132 (32%), Positives = 69/132 (52%)
Query: 227 STMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEG 286
ST QK + L H + V CA F GR +++ SDD+ VK+W + C+ S H G
Sbjct: 131 STHRQKF--LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGG 188
Query: 287 DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+T + + T +A+A D ++VW + + + H+ AV A++F PS Y L+
Sbjct: 189 FVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF--HPSGNY-LV 245
Query: 347 SSSDDGTCRIWD 358
++S D T +I D
Sbjct: 246 TASSDSTLKILD 257
Score = 159 (61.0 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 65/249 (26%), Positives = 97/249 (38%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ GH+DAV C F SG + +GS D+ V+IW R H + + S+
Sbjct: 56 RFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+AS+D ++VW + L H V FSP I +S+SDD T ++W
Sbjct: 116 QSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI---VSASDDKTVKLW 172
Query: 358 D--AR-----YSQYSPRI-YLPKPPD----AITGKXXXXXXXXXXXXXXLQSHQILCCAY 405
D +R Y ++ + Y+ P A G LQ +Q+ A
Sbjct: 173 DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAV 232
Query: 406 NA-----NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCA 460
NA +G VT SSD+ ++ + + L L GH+ V FS
Sbjct: 233 NALSFHPSGNYLVTASSDSTLKILDLMEGRL---------LYTLHGHQGPATTVAFSRTG 283
Query: 461 VASRSAMSD 469
S SD
Sbjct: 284 EYFASGGSD 292
Score = 148 (57.2 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GHRDAV F + + + +GS D + +W M+ GH+ +T + S +
Sbjct: 13 RHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPS 72
Query: 297 NTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
L+AS S D +R+W +P+ S V R HT V ++ F S +++SDD T +
Sbjct: 73 GHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFC---SDGQSFVTASDDKTVK 128
Query: 356 IWDARYSQY 364
+W ++
Sbjct: 129 VWSTHRQKF 137
Score = 107 (42.7 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++A D + +W+ VHS H +D HP IA +AG D
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIA-AAGMDNTV 211
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
VWD+ ++ Y++ + F P G +V + + +L+ +G
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEG 261
Score = 60 (26.2 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 15/68 (22%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + +++ A D + + + ++G L+++L GH + + A S G
Sbjct: 232 VNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFA-SGG 290
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 291 SDEQVMVW 298
Score = 45 (20.9 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 11/15 (73%), Positives = 11/15 (73%)
Query: 637 KFSPDGTSIV-LSDD 650
KFSPDG IV SDD
Sbjct: 152 KFSPDGRLIVSASDD 166
Score = 39 (18.8 bits), Expect = 4.0e-12, Sum P(3) = 4.0e-12
Identities = 15/64 (23%), Positives = 27/64 (42%)
Query: 1182 VHKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAESDPIP 1241
V KS N D+ +Y + L+ P R + G L + S + + S +P+
Sbjct: 297 VWKS-NFDI-VDYGEVLRVQRPPATRASSSGTLPEVDPLVPPGRGRSQESMQSHSQEPVS 354
Query: 1242 MSES 1245
+ +S
Sbjct: 355 VPQS 358
Score = 37 (18.1 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 7/49 (14%), Positives = 22/49 (44%)
Query: 1416 SWLMLSEHEEGYRYIPQLGDEVIYSRQGHQEFIESTGSQEVGPWWSING 1464
++L+ + + + + + ++Y+ GHQ + G +++ G
Sbjct: 242 NYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGG 290
>POMBASE|SPAC29E6.01 [details] [associations]
symbol:pof11 "F-box protein Pof11" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISM] [GO:0030674 "protein binding,
bridging" evidence=ISM] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
PomBase:SPAC29E6.01 GO:GO:0005829 GO:GO:0007126 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030674 SUPFAM:SSF81383
GO:GO:0016567 GO:GO:0000151 KO:K03362 EMBL:Z66525 EMBL:AB061694
PIR:T38502 PIR:T50211 RefSeq:NP_594559.1 ProteinModelPortal:Q09855
IntAct:Q09855 EnsemblFungi:SPAC29E6.01.1 GeneID:2541707
KEGG:spo:SPAC29E6.01 OMA:CIEANDK OrthoDB:EOG4HQHSG NextBio:20802799
Uniprot:Q09855
Length = 506
Score = 181 (68.8 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 66/245 (26%), Positives = 99/245 (40%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
R D+VYC +D +++GS DR V +W + + F L GH G + L L
Sbjct: 218 RATLDSVYCVQYD--DEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNL 275
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW-- 357
+ S S+D I +W + P+ V GHT V + S Y ++SSS D T R+W
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN----Y-IISSSRDHTARVWRL 330
Query: 358 DA-------------RYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXX----LQSHQ- 399
DA + + Y K +T + +HQ
Sbjct: 331 DATSPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQR 390
Query: 400 -ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
I C YN G V+GSSD R++ A + L +L GHE+ + V+F+
Sbjct: 391 GIACAQYN--GKFIVSGSSDLTIRIFEASSGKL---------LRMLQGHEDLIRTVRFND 439
Query: 459 CAVAS 463
+ S
Sbjct: 440 EKIVS 444
Score = 170 (64.9 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 42/125 (33%), Positives = 62/125 (49%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
KL GH +V C F R +++GS D + IW + L GH ++ + VS N
Sbjct: 256 KLYGHSGSVLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNVLGVVVSEN- 314
Query: 298 TLVASASNDFVIRVWRLPDGLP----ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+ S+S D RVWRL P + VLRGH +V ++ +S + I +++S D T
Sbjct: 315 -YIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTGLI---VTASSDRT 370
Query: 354 CRIWD 358
R WD
Sbjct: 371 LRTWD 375
Score = 151 (58.2 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 32/120 (26%), Positives = 55/120 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
LRGH +V + ++T S DR ++ W + T C+ H+ I N
Sbjct: 343 LRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIA--CAQYNGK 400
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ S S+D IR++ G + +L+GH + + F+ +++S DGT RIW+
Sbjct: 401 FIVSGSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRFNDE-----KIVSGGYDGTVRIWN 455
Score = 82 (33.9 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 27/107 (25%), Positives = 43/107 (40%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
+ +F+++ D I ++ A G L+ L GH + V FN +S GYDG +W
Sbjct: 398 NGKFIVSGSSDLTIRIFEASSGKLLRMLQGHE--DLIRTVR-FNDEKIVSGGYDGTVRIW 454
Query: 616 DIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+ G + R V G D I+ +I + N G
Sbjct: 455 NFNTGEQHCVLHNSRNSRVFG-LQFDHRRIIACTHSSEILVWNFDDG 500
Score = 68 (29.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/122 (25%), Positives = 51/122 (41%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
+ +HQ I C YN G V+GSSD R++ A + L +L GHE+ +
Sbjct: 385 IHAHQRGIACAQYN--GKFIVSGSSDLTIRIFEASSGKL---------LRMLQGHEDLIR 433
Query: 453 YVQFSGCAVASRSAMSDA----FK--EEN--VPKFKNS-----WFCHDNIVTCSRDGSAI 499
V+F+ + S F E++ + +NS F H I+ C+ +
Sbjct: 434 TVRFNDEKIVSGGYDGTVRIWNFNTGEQHCVLHNSRNSRVFGLQFDHRRIIACTHSSEIL 493
Query: 500 IW 501
+W
Sbjct: 494 VW 495
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 201 (75.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 44/120 (36%), Positives = 63/120 (52%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + ++ TGS D+ V++WS + + GH G + LA S N +
Sbjct: 424 GHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYL 483
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT +T++ FSP S I S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLI---ASASMDNSVRVWDIR 540
Score = 153 (58.9 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ N +GH V+ + + S DR ++WS + + L GH D+
Sbjct: 371 LRSFTNTVLYQGHAYPVWDLDISPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVD 430
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ N+ +A+ S D +R+W G + + GH G V A+AFSP Y L S+
Sbjct: 431 CVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGK--Y-LASAG 487
Query: 350 DDGTCRIWD 358
+D ++WD
Sbjct: 488 EDQRLKLWD 496
Score = 148 (57.2 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 236 IKKLRGHRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+K LRGH VY F D SG +++ S+D ++ W + + +GH + DL +
Sbjct: 335 MKILRGHCGPVYSTRFLSDSSG--LLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWDLDI 392
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S + ASAS+D R+W P+ + GH V + F P + Y L + S D T
Sbjct: 393 SPCSLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSN--Y-LATGSTDKT 449
Query: 354 CRIWDARYSQYSPRIY 369
R+W + S R++
Sbjct: 450 VRLWSTQQGN-SVRLF 464
Score = 144 (55.7 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+++ + +D+ +K+W + + RGH +IT
Sbjct: 456 QQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 291 LAVSSNNTLVASASNDFVIRVW 312
L S +++L+ASAS D +RVW
Sbjct: 516 LTFSPDSSLIASASMDNSVRVW 537
Score = 84 (34.6 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDG 610
+ +S + +++ +A D R+ +W+ G+L L GH+ + L P + IA SA D
Sbjct: 474 LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA-SASMDN 532
Query: 611 RTIVWDI 617
VWDI
Sbjct: 533 SVRVWDI 539
Score = 40 (19.1 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWN 573
+ + +S D+ + +A MD + VW+
Sbjct: 513 ITSLTFSPDSSLIASASMDNSVRVWD 538
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 1670 YRSLEAAKDDINVMLSNAESYFIKNAALSAKVERLRDWFNRTLN 1713
Y+ L D+I + + +S I +A++ V R+ D N N
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSV-RVWDIRNTYCN 545
>FB|FBgn0030011 [details] [associations]
symbol:Gbeta5 "Gbeta5" species:7227 "Drosophila melanogaster"
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS;NAS]
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K04539 OMA:ATDGLHE EMBL:BT004841 RefSeq:NP_572452.1
UniGene:Dm.11050 SMR:Q9W3J1 IntAct:Q9W3J1 STRING:Q9W3J1
EnsemblMetazoa:FBtr0071189 GeneID:31744 KEGG:dme:Dmel_CG10763
UCSC:CG10763-RA CTD:31744 FlyBase:FBgn0030011 InParanoid:Q9W3J1
OrthoDB:EOG4TTF0F GenomeRNAi:31744 NextBio:775120 Uniprot:Q9W3J1
Length = 358
Score = 182 (69.1 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 226 PSTMVQKMQNIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
P T ++M K+ G H + C I+ S + ++TGS D +W +E+ L S GH
Sbjct: 140 PITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHGH 199
Query: 285 EGDIT--DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
GD+ DLA + S S D + +W + G + GH V ++ F P AI
Sbjct: 200 SGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPCGDAI 259
Query: 343 YQLLSSSDDGTCRIWDAR 360
+ SDD +CR++D R
Sbjct: 260 ---ATGSDDSSCRLYDMR 274
Score = 99 (39.9 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 31/128 (24%), Positives = 54/128 (42%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K L+GH+ V C + R +I+ S D + IW T + I A + +
Sbjct: 64 KVLKGHQAKVLCTDWSPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPS 123
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTA-IAFSPRPSAIYQLLSSSDDGTCR 355
VA D + V+ + ++ + G T+ ++ P++ Q+L+ S D TC
Sbjct: 124 GNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCA 183
Query: 356 IWDARYSQ 363
+WD Q
Sbjct: 184 LWDVESGQ 191
Score = 95 (38.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 25/93 (26%), Positives = 40/93 (43%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP-RIAMSAGYDGRTIVWDIW 618
+L D +W+ G L+ S GHS +D+ P +S D +WD+
Sbjct: 173 ILTGSGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMR 232
Query: 619 EGTPIRIYEIGRFKLVDGKFSPDGTSIVL-SDD 650
G ++ +E + + KF P G +I SDD
Sbjct: 233 SGHVVQSFEGHQSDVNSVKFHPCGDAIATGSDD 265
Score = 83 (34.3 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 404 AYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVAS 463
A N G FV+GS D A +W +S H + GH++DVN V+F C A
Sbjct: 209 APNETGNTFVSGSCDRMAFIWDM-RSG--------HVVQSFEGHQSDVNSVKFHPCGDAI 259
Query: 464 RSAMSDA 470
+ D+
Sbjct: 260 ATGSDDS 266
Score = 70 (29.7 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 319 PISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLP 371
P VL+GH V +SP I +SSS DG IWDA + + +P
Sbjct: 62 PRKVLKGHQAKVLCTDWSPDKRHI---ISSSQDGRLIIWDAFTTNKEHAVTMP 111
Score = 62 (26.9 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + +S+ R + A D + +W+ + V L GH + V P A+S G
Sbjct: 291 VNSVDFSVSGRLLFAGYNDYTVNLWDTLKSERVCLLYGHENKVSCVQVSPDGT--ALSTG 348
Query: 608 YDGRTI-VW 615
TI VW
Sbjct: 349 SWDYTIRVW 357
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 201 (75.8 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 43/120 (35%), Positives = 62/120 (51%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + ++ TGS D+ V++WS + + GH G + LA S N +
Sbjct: 424 GHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYL 483
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT +T++ FSP I S+S D + R+WD R
Sbjct: 484 ASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLI---ASASMDNSVRVWDIR 540
Score = 158 (60.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+GH V+ + +GS DR ++WS + + L GH D+ + N+
Sbjct: 381 QGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNY 440
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+A+ S D +R+W G + + GH G V ++AFSP Y L S+ +D ++WD
Sbjct: 441 LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGK--Y-LASAGEDQRLKLWD 496
Score = 151 (58.2 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 41/136 (30%), Positives = 65/136 (47%)
Query: 236 IKKLRGHRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+K LRGH VY F D SG +++ S+D ++ W + + +GH + DL +
Sbjct: 335 MKILRGHCGPVYSTRFLADSSG--LLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDI 392
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S + AS S+D R+W P+ + GH V + F P + Y L + S D T
Sbjct: 393 SPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSN--Y-LATGSTDKT 449
Query: 354 CRIWDARYSQYSPRIY 369
R+W A+ S R++
Sbjct: 450 VRLWSAQQGN-SVRLF 464
Score = 140 (54.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 26/82 (31%), Positives = 46/82 (56%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+++ + +D+ +K+W + + RGH +IT
Sbjct: 456 QQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITS 515
Query: 291 LAVSSNNTLVASASNDFVIRVW 312
L S ++ L+ASAS D +RVW
Sbjct: 516 LTFSPDSGLIASASMDNSVRVW 537
Score = 83 (34.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDG 610
+ +S + +++ +A D R+ +W+ G+L L GH+ + L P + IA SA D
Sbjct: 474 LAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA-SASMDN 532
Query: 611 RTIVWDI 617
VWDI
Sbjct: 533 SVRVWDI 539
Score = 39 (18.8 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWN 573
+ + +S D+ + +A MD + VW+
Sbjct: 513 ITSLTFSPDSGLIASASMDNSVRVWD 538
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 165 (63.1 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 42/154 (27%), Positives = 69/154 (44%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
KP + +K L + AV F+ G + +T D+ +K+W+ L + GH
Sbjct: 7 KPRGPELPQKRLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
++ D A S +N+ + S D + +W + G + RGH G V + F+ + I
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVI-- 124
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT 378
LS S D + R WD R + P L + D I+
Sbjct: 125 -LSGSIDSSVRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 108 (43.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/134 (25%), Positives = 60/134 (44%)
Query: 236 IKKLRGHRDAVYCAI--FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
++ GH V A FD S + +G D+ V +W + + + RGH G + +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSS--LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF 117
Query: 294 SSNNTLVASASNDFVIRVW----RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ T++ S S D +R W R P+ P+ L ++++ S +++L+ S
Sbjct: 118 NEEATVILSGSIDSSVRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEVLAGS 170
Query: 350 DDGTCRIWDARYSQ 363
DG R +D R Q
Sbjct: 171 VDGRVRRYDLRMGQ 184
Score = 77 (32.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMSAGYDG 610
+S D + L + +D + + + G L+ TGH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHV-VSCSEDG 257
Query: 611 RTIVWDIWEGTPIRIYEIG 629
+ WD+ EG + +G
Sbjct: 258 KVFFWDLVEGVLVLALPVG 276
Score = 50 (22.7 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
V++ D ++ W+ V+G LV +L + L HP P + + G G W
Sbjct: 250 VVSCSEDGKVFFWDLVEGVLVLALPVGPSVVQSLAYHPTEPCLLTAMG--GSVQCW 303
Score = 45 (20.9 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 488 NIVTCSRDGSAIIW 501
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>ASPGD|ASPL0000005389 [details] [associations]
symbol:sconB species:162425 "Emericella nidulans"
[GO:0043224 "nuclear SCF ubiquitin ligase complex" evidence=IEA]
[GO:0043130 "ubiquitin binding" evidence=IEA] [GO:0030674 "protein
binding, bridging" evidence=IEA] [GO:0030174 "regulation of
DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000087
"M phase of mitotic cell cycle" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0000114 "regulation of transcription involved in G1 phase of
mitotic cell cycle" evidence=IEA] [GO:0046686 "response to cadmium
ion" evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0046685 "response to arsenic-containing
substance" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 SUPFAM:SSF81383
GO:GO:0016567 EMBL:AACD01000107 EMBL:BN001301 HOGENOM:HOG000166480
KO:K10259 OMA:ILCYLDT OrthoDB:EOG496313 EMBL:U21220
RefSeq:XP_663963.1 ProteinModelPortal:Q00659 STRING:Q00659
EnsemblFungi:CADANIAT00006625 GeneID:2871261 KEGG:ani:AN6359.2
Uniprot:Q00659
Length = 678
Score = 198 (74.8 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 42/125 (33%), Positives = 68/125 (54%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ ++ LRGH + C FD + +I+GS DR +K+W+ T C+++ GH G + L
Sbjct: 380 EELRTLRGHESGIRCLQFDDTK--LISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHF 437
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
++ ++AS S D +++W D S LRGHT V A+ ++ S+SDD T
Sbjct: 438 DAS--ILASGSVDKTVKIWNFEDKSTFS-LRGHTDWVNAVRVDTSSRTVF---SASDDCT 491
Query: 354 CRIWD 358
R+WD
Sbjct: 492 VRLWD 496
Score = 167 (63.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 46/124 (37%), Positives = 63/124 (50%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
+IK +GH + V C F+ + + TGS D +KIW ET L + RGHE I L
Sbjct: 341 SIKTFKGHTNGVMCLQFEDN--ILATGSYDTTIKIWDTETGEELRTLRGHESGIRCLQF- 397
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
++T + S S D I+VW G IS GH G V + F ++I L S S D T
Sbjct: 398 -DDTKLISGSMDRTIKVWNWRTGECISTYTGHRGGVIGLHFD---ASI--LASGSVDKTV 451
Query: 355 RIWD 358
+IW+
Sbjct: 452 KIWN 455
Score = 138 (53.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 36/103 (34%), Positives = 49/103 (47%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I GHR V FD S + +GS D+ VKIW+ E S RGH + + V +
Sbjct: 422 ISTYTGHRGGVIGLHFDAS--ILASGSVDKTVKIWNFEDKSTF-SLRGHTDWVNAVRVDT 478
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPR 338
++ V SAS+D +R+W L I GH G V + PR
Sbjct: 479 SSRTVFSASDDCTVRLWDLDTKTCIRTFHGHVGQVQQVVPLPR 521
Score = 56 (24.8 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
R+++ + +D I +W G + + GH + L RI +G + R I +WD
Sbjct: 580 RYMVTSALDSTIRLWETTTGRCLRTFFGHLEGVWALGADTL--RIV--SGAEDRMIKIWD 635
Score = 52 (23.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
VW+L D +++ D I +W+ G + TGHS
Sbjct: 612 VWALGADTLRIVSGAEDRMIKIWDPRTGKCERTFTGHS 649
Score = 49 (22.3 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
VN + +R V +A DC + +W+ + + + GH
Sbjct: 471 VNAVRVDTSSRTVFSASDDCTVRLWDLDTKTCIRTFHGH 509
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 156 (60.0 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 37/142 (26%), Positives = 71/142 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAVSSN 296
L+GH +Y + F G F+ + D+ + +W++ C A +GH+G I ++ +++
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNV-FGECENFAVLKGHKGAIMEVKFNAD 90
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
++ + SA D +RVW + G I + HT V ++ + R + + S+SDDGT +
Sbjct: 91 SSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQM--ICSASDDGTVMV 148
Query: 357 WDARYSQYSPRIYLPKPPDAIT 378
D R + + + A+T
Sbjct: 149 HDMRSKEAAKKFICKYQQTAVT 170
Score = 113 (44.8 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 28/128 (21%), Positives = 58/128 (45%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+N L+GH+ A+ F+ +++ D+ V++W MET C+ + + H + + V
Sbjct: 70 ENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDV 129
Query: 294 SSNNT-LVASASNDFVIRV--WRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ ++ SAS+D + V R + + + TA+ F+ A ++
Sbjct: 130 NRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQ---TAVTFN---DAADNVICGGI 183
Query: 351 DGTCRIWD 358
D ++WD
Sbjct: 184 DNQIKVWD 191
Score = 88 (36.0 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 22/61 (36%), Positives = 32/61 (52%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS + ++ A D + VWNA + V+ L GH S +HP +I +SAG D +T
Sbjct: 263 WSPRDNYITAGSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHP-TQQILLSAGSD-KT 320
Query: 613 I 613
I
Sbjct: 321 I 321
Score = 56 (24.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
DN V+ +D +I VW+ + + + L+GH + L V N +S D + W
Sbjct: 176 DN--VICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVS-HNGNFLLSNSMDCSLMSW 232
Query: 616 DI 617
DI
Sbjct: 233 DI 234
Score = 52 (23.4 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA 426
+L C ++ GS+D F VW+A
Sbjct: 258 LLKCGWSPRDNYITAGSADRFVYVWNA 284
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 549 NMI-VWSL---DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAM 604
N I VW + D R+VL+ D + + +G+ + S S D+ PF P +
Sbjct: 185 NQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLS-NSMDCSLMSWDIRPFVPAQRL 243
Query: 605 SAGYDG 610
A Y G
Sbjct: 244 VARYQG 249
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 169 (64.5 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DL 291
+ + +++ H D V C F RF+ T S D+ VKIW+ T + + H +
Sbjct: 648 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHF 707
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
SS++ L+A+ S+D +++W L + + GHT +V FSP L S S D
Sbjct: 708 TNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKL---LASCSAD 764
Query: 352 GTCRIWDA 359
GT ++WDA
Sbjct: 765 GTLKLWDA 772
Score = 139 (54.0 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 39/121 (32%), Positives = 61/121 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
LRGH++ V ++ R +++ S D VK+W++ T H+G + +S + T
Sbjct: 1040 LRGHQETVKDFRLLKNSR-LLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDAT 1098
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD-GTCRIW 357
+S S D ++W LP+ LRGH G V AFS + LL++ DD G RIW
Sbjct: 1099 KFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDST----LLATGDDNGEIRIW 1154
Query: 358 D 358
+
Sbjct: 1155 N 1155
Score = 134 (52.2 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ + N+ +L R H DAVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 601 KNITNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV 660
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A S+++ +A+ S D +++W G + H+ V F+ S+ + LL++
Sbjct: 661 LCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTN--SSHHLLLAT 718
Query: 349 -SDDGTCRIWD 358
S D ++WD
Sbjct: 719 GSSDCFLKLWD 729
Score = 116 (45.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 31/133 (23%), Positives = 58/133 (43%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + G ++ + +++ ++ + T+ L GH I S N L A
Sbjct: 801 VKCCSWSADGARIMVAAKNKIF-LFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVAL 859
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQY 364
+ + + +W ++ RGH V + FSP S+ L+SSDD T R+W+ +
Sbjct: 860 SQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSF---LTSSDDQTIRLWETKKVCK 916
Query: 365 SPRIYLPKPPDAI 377
+ + L + D +
Sbjct: 917 NSAVMLKQEVDVV 929
Score = 113 (44.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 31/116 (26%), Positives = 55/116 (47%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H+ V+ F + +I+ SDD +++W+ + C+ RGH+ + D + N+ L+
Sbjct: 1002 HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSRLL- 1059
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H G V + S + + S+S D T +IW
Sbjct: 1060 SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDAT---KFSSTSADKTAKIW 1112
Score = 81 (33.6 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVH---SLTGHSASSY---VLDVHPFNP- 600
V +S+D+ + + I +WN +G L+H L+ A+++ V D+ F+P
Sbjct: 1130 VRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLC-FSPD 1188
Query: 601 -RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
++ +SAG G W++ G + + L SPD + V D++G +Y+L T
Sbjct: 1189 GKMLISAG--GYIKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQT 1246
Score = 74 (31.1 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 28/111 (25%), Positives = 44/111 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L N +L+ D + VWN + G+ H + D+ + + S D +
Sbjct: 1053 LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFS-STSADKTAKI 1111
Query: 615 WDIWEGTPIRIYEI-GRFKLVD-GKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W P+ +E+ G V FS D T + DD G+I + N GE
Sbjct: 1112 WSFDLLLPL--HELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGE 1160
Score = 64 (27.6 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWN-AVDGSLVHSLTGHSASSYVLDVHPF-NPRIAMSAGY 608
I ++ D + ++++ D I VWN +D + L GH + V D N R+ +S +
Sbjct: 1009 IQFTADEKTLISSSDDAEIQVWNWQLDKCIF--LRGHQET--VKDFRLLKNSRL-LSWSF 1063
Query: 609 DGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
DG VW+I G + + + ++ S D T S +D +I+
Sbjct: 1064 DGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIW 1112
Score = 62 (26.9 bits), Expect = 5.5e-12, Sum P(3) = 5.5e-12
Identities = 21/62 (33%), Positives = 29/62 (46%)
Query: 398 HQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
HQ +L C + + T F + S+D A++WS D P+HEL GH V
Sbjct: 1084 HQGTVLSCDISHDATKFSSTSADKTAKIWSF------DLLLPLHEL---RGHNGCVRCSA 1134
Query: 456 FS 457
FS
Sbjct: 1135 FS 1136
Score = 59 (25.8 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 405 YNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDV 451
++ +G+ F+T S D R+W CK+S +Q E+DV+ EN+V
Sbjct: 890 FSPDGSSFLTSSDDQTIRLWETKKVCKNSAVMLKQ---EVDVVF-QENEV 935
Score = 54 (24.1 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHE 440
L+ H + C A++ + T+ TG + R+W+ + P+ E
Sbjct: 1123 LRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSE 1170
>RGD|1564964 [details] [associations]
symbol:Phip "pleckstrin homology domain interacting protein"
species:10116 "Rattus norvegicus" [GO:0001932 "regulation of
protein phosphorylation" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006606 "protein import into nucleus"
evidence=IEA;ISO] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA;ISO] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA;ISO] [GO:0010800 "positive
regulation of peptidyl-threonine phosphorylation" evidence=IEA;ISO]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA;ISO]
[GO:0033138 "positive regulation of peptidyl-serine
phosphorylation" evidence=IEA;ISO] [GO:0040008 "regulation of
growth" evidence=IEA;ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA;ISO] [GO:0043568 "positive
regulation of insulin-like growth factor receptor signaling
pathway" evidence=ISO] [GO:0045840 "positive regulation of mitosis"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA;ISO]
InterPro:IPR001487 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
SMART:SM00297 RGD:1564964 GO:GO:0005634 GO:GO:0008286 GO:GO:0007010
GO:GO:0043066 GO:GO:0008284 GO:GO:0045944 GO:GO:0010800
GO:GO:0006606 GO:GO:0040008 GO:GO:0033138 GO:GO:0022604
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00700000104382 IPI:IPI00911360
Ensembl:ENSRNOT00000011864 Uniprot:F1M3B3
Length = 1196
Score = 212 (79.7 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 55/181 (30%), Positives = 87/181 (48%)
Query: 1429 YIPQLGDEVIYSRQGHQEFIESTGSQEV-------GPWWSINGYISAVETCKVVNLVYAT 1481
++PQ+GDEV Y RQGH+ ++E + PW + + E K+V + Y
Sbjct: 330 FVPQMGDEVYYFRQGHEAYVEMARKNRIYSINPKKQPWHKME--LREQELMKIVGIKYEV 387
Query: 1482 FPGSGDSCCKITLKFVDPSSSVL-GKAFKLTLPELRDFPDFVVEKTLYDAAISRNWTHRD 1540
G CC + L F+DP + L G +F + ++ D DF+V + +D A R W D
Sbjct: 388 --GLPTLCC-LKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGD 444
Query: 1541 KCQIWWRNANGEGGTWWKGRITKSQAKSEEFPNSPWDRYMVEYKTGDSHLHSPWEMH-DP 1599
+ +R+ + WW G I + E+P+S + Y V + GD+ SPW+M P
Sbjct: 445 R----FRSVIDDA--WWFGTIESQEPLQPEYPDSLFQCYNVCWDNGDTEKMSPWDMELIP 498
Query: 1600 N 1600
N
Sbjct: 499 N 499
Score = 52 (23.4 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 17/71 (23%), Positives = 34/71 (47%)
Query: 1647 DYLNRFPVPLYPEVIRLRL-VNNYYRSLEAAKDDINVMLSNAESYF-IKNAALSAKVERL 1704
DY + P+ +R L NY +E KD + ++ SN+++Y K + + + RL
Sbjct: 726 DYRDIIDTPMDFATVRETLEAGNYESPMELCKD-VRLIFSNSKAYTPSKRSRIYSMSLRL 784
Query: 1705 RDWFNRTLNKL 1715
+F ++ +
Sbjct: 785 SAFFEEHISSV 795
Score = 46 (21.3 bits), Expect = 5.6e-12, Sum P(3) = 5.6e-12
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 1135 SDKEKFGSDALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNY 1194
SD + +DA ++L +K + +H+ K+ SS + ++Q+ + K R +
Sbjct: 224 SDYSDWTADAGINLQPPKK--VPKHKTKKQDSSSDEEEESENQKQKHIKKERKK------ 275
Query: 1195 RDELKENP--PLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAE-SDPIP 1241
+E K+ P P + + + + R + T + LPSA +D +P
Sbjct: 276 ANEEKDGPTSPKKKKPKERKQKRLAVGELTENGLTLEEWLPSAWITDTLP 325
Score = 44 (20.5 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 641 DGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNV-LD-QETQLVP 698
+GTS S D G++ ++ G E ++ A + DY D + ++ Q + VP
Sbjct: 188 NGTS---SSDEGEVLAVSGGTSEEEERAWHSDGSSSDYSSDYSDWTADAGINLQPPKKVP 244
Query: 699 -HRRNIQDPLCDSSMIPYEEPYQSMYQQRR 727
H+ QD D + + + ++R+
Sbjct: 245 KHKTKKQDSSSDEEEESENQKQKHIKKERK 274
Score = 42 (19.8 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 1183 HKSRNEDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQKSS-TSVKDLPSAESDPIP 1241
HK++ +D ++ +E EN + K I ++ K +E+K TS K E
Sbjct: 246 HKTKKQDSSSDEEEE-SENQ------KQKHIKKERKKANEEKDGPTSPKKKKPKERKQKR 298
Query: 1242 MSESSLCMEGNLMSE 1256
++ L G + E
Sbjct: 299 LAVGELTENGLTLEE 313
Score = 41 (19.5 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 917 TVLQDSHVQSKEDDRNLQNMQQQHKREEEQTIVESE 952
T QDS S +++ +N +Q+H ++E + E +
Sbjct: 248 TKKQDS---SSDEEEESENQKQKHIKKERKKANEEK 280
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 10/40 (25%), Positives = 18/40 (45%)
Query: 1654 VPLYP---EVIRLRLVNNYYRSLEAAKDDINVMLSNAESY 1690
V YP I+ RL N +YR + ++ + N ++
Sbjct: 573 VVAYPTDLSTIKQRLENRFYRRFSSLMWEVRYIEHNTRTF 612
>POMBASE|SPAC6B12.15 [details] [associations]
symbol:cpc2 "RACK1 ortholog Cpc2" species:4896
"Schizosaccharomyces pombe" [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IGI] [GO:0031139 "positive regulation of
conjugation with cellular fusion" evidence=IMP] [GO:0032956
"regulation of actin cytoskeleton organization" evidence=IGI]
[GO:0032995 "regulation of fungal-type cell wall biogenesis"
evidence=IGI] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035556 "intracellular signal transduction"
evidence=IMP] [GO:0043022 "ribosome binding" evidence=IDA]
[GO:2000766 "negative regulation of cytoplasmic translation"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC6B12.15 GO:GO:0005737 EMBL:CU329670
GO:GO:0034613 GO:GO:0016020 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032995
InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0043022 GO:GO:0032956 HOGENOM:HOG000091643
KO:K14753 OMA:IRVWQVM EMBL:L37885 EMBL:AF320333 EMBL:D89247
PIR:T43158 PIR:T43299 RefSeq:NP_593770.1 ProteinModelPortal:Q10281
SMR:Q10281 IntAct:Q10281 MINT:MINT-1203489 STRING:Q10281
PRIDE:Q10281 EnsemblFungi:SPAC6B12.15.1 GeneID:2543298
KEGG:spo:SPAC6B12.15 OrthoDB:EOG437VPP NextBio:20804316
GO:GO:2000766 GO:GO:0031139 Uniprot:Q10281
Length = 314
Score = 166 (63.5 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 35/125 (28%), Positives = 64/125 (51%)
Query: 237 KKLRGHRDAVY-CAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++L GH V CA+ FD + ++ S D+ +++W +E C GH D+ +++S
Sbjct: 57 RRLTGHSHFVSDCALSFD--SHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSIS 114
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRG-HTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+N V S S D I++W + ++ G H+ V+ + FSP P + +S+ D
Sbjct: 115 PDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNL-TFVSAGWDKA 173
Query: 354 CRIWD 358
++WD
Sbjct: 174 VKVWD 178
Score = 122 (48.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 258 VITGSDDRLVKIWSM---ETAFCLASCR--GHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+++GS D+ + +W++ + + +A R GH ++D A+S ++ SAS D IR+W
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLW 90
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L G GHT V +++ SP Q++S S D T +IW+
Sbjct: 91 DLEKGECTHQFVGHTSDVLSVSISPDNR---QVVSGSRDKTIKIWN 133
Score = 75 (31.5 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 24/87 (27%), Positives = 41/87 (47%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
DN ++A D + VW+ SL S GH+ + + P + + S G DG ++W
Sbjct: 161 DNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISP-DGSLCASGGRDGTLMLW 219
Query: 616 DIWEGTPIRIYEIGRFKLVDGK-FSPD 641
D+ E T +Y + ++ FSP+
Sbjct: 220 DLNEST--HLYSLEAKANINALVFSPN 244
Score = 42 (19.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACK 428
+ + ++ +G +G +D RVW K
Sbjct: 285 ECISLTWSPDGQTLFSGWTDNLIRVWQVTK 314
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 176 (67.0 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 43/136 (31%), Positives = 73/136 (53%)
Query: 239 LRGHRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ GH + C+ F S R V TG+ D +IW +T + + +GH + ++ S +
Sbjct: 139 IAGHGSTILCSAFAPHTSSRMV-TGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPD 197
Query: 297 NTLVASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP----RPSAIYQLLSSSDD 351
++A+ S D IR+W G + LRGH+ +T++++ P +P + +L SSS D
Sbjct: 198 GEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKD 257
Query: 352 GTCRIWD--ARYSQYS 365
GT +IWD +R QY+
Sbjct: 258 GTIKIWDTVSRVCQYT 273
Score = 156 (60.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 47/154 (30%), Positives = 75/154 (48%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWS-METAFCLASCRG 283
KPST + + K L + C S ++T SDD + +W+ +++ +A G
Sbjct: 345 KPSTPEEAQK--KALENYEKI--CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTG 400
Query: 284 HEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
H+ + +A S + + SAS D I++W DG IS RGH +V +A+S S
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWS---SDCR 457
Query: 344 QLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAI 377
L+S S D T ++WD R + S + LP D +
Sbjct: 458 LLVSCSKDTTLKVWDVRTRKLS--VDLPGHKDEV 489
Score = 146 (56.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASC-RGHEGDITDLAVS--- 294
L+GH + V C + G + TGS D +++W ++ CL RGH IT L+
Sbjct: 182 LKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIH 241
Query: 295 ----SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ +AS+S D I++W + + GHT +V+ + + + +Y S S
Sbjct: 242 LVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQ-GLLY---SGSH 297
Query: 351 DGTCRIWD 358
D T R+WD
Sbjct: 298 DRTVRVWD 305
Score = 134 (52.2 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 81/370 (21%), Positives = 141/370 (38%)
Query: 283 GHEGDITDLAVSSN-NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA 341
GH I A + + ++ + + + D R+W P+ L+GH V +++SP
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 342 IYQLLSSSDDGTCRIWDARYSQ-----------------YSPRIYLPKP---PDAIT--- 378
I + S D T R+WD + Q + P I+L KP P +
Sbjct: 201 I---ATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEP-IHLVKPGSKPRLASSSK 256
Query: 379 -GKXXXXXXXXXXXXXXLQSH--QILCCAYNANGTVFVTGSSDTFARVWSA-----CKSS 430
G + H + C + G ++ +GS D RVW C +
Sbjct: 257 DGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQGLLY-SGSHDRTVRVWDINSQGRCINI 315
Query: 431 VEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAMSDAFKE--ENVPKF-KNSWFCHD 487
++ ++ L + + + + +G S +A K+ EN K K + +
Sbjct: 316 LKSHAHWVNHLSLSTDYALRIGAFDHTG---KKPSTPEEAQKKALENYEKICKKNGNSEE 372
Query: 488 NIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXX 547
+VT S D + +W P +S + R T H K+
Sbjct: 373 MMVTASDDYTMFLWNPL--KSTKPIARMTG--HQKL------------------------ 404
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + +S D R++++A D I +W+ DG + + GH AS Y + + R+ +S
Sbjct: 405 VNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQV-AWSSDCRLLVSCS 463
Query: 608 YDGRTIVWDI 617
D VWD+
Sbjct: 464 KDTTLKVWDV 473
Score = 133 (51.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I ++ GH+ V F GR++++ S D +K+W +++ RGH + +A SS
Sbjct: 395 IARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSS 454
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISV-LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ S S D ++VW + +SV L GH V + +S + S D
Sbjct: 455 DCRLLVSCSKDTTLKVWDVRTR-KLSVDLPGHKDEVYTVDWSVDGKRV---CSGGKDKMV 510
Query: 355 RIW 357
R+W
Sbjct: 511 RLW 513
Score = 74 (31.1 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 19/68 (27%), Positives = 28/68 (41%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + WS D R +++ D + VW+ L L GH Y +D R+ S G
Sbjct: 447 VYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVC-SGG 505
Query: 608 YDGRTIVW 615
D +W
Sbjct: 506 KDKMVRLW 513
Score = 68 (29.0 bits), Expect = 2.7e-11, Sum P(2) = 2.7e-11
Identities = 30/129 (23%), Positives = 57/129 (44%)
Query: 395 LQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYV 454
L++++ +C + + VT S D +W+ KS+ +PI + +GH+ VN+V
Sbjct: 357 LENYEKICKKNGNSEEMMVTASDDYTMFLWNPLKST-----KPIARM---TGHQKLVNHV 408
Query: 455 QFS--GCAVASRS-------------AMSDAFKEENVPKFKNSWFCHDNI-VTCSRDGSA 498
FS G + S S F+ ++ +W + V+CS+D +
Sbjct: 409 AFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTL 468
Query: 499 IIWIPRSRR 507
+W R+R+
Sbjct: 469 KVWDVRTRK 477
Score = 51 (23.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 560 VLAAIMDCRICVWNAVDGSL-VHSLTGHSASSYVLDVHPFNP--RIAMSAGYDGRTIVWD 616
++ A D + +WN + + + +TGH +++ F+P R +SA +D +WD
Sbjct: 374 MVTASDDYTMFLWNPLKSTKPIARMTGHQK---LVNHVAFSPDGRYIVSASFDNSIKLWD 430
Query: 617 IWEG 620
+G
Sbjct: 431 GRDG 434
Score = 45 (20.9 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 604 MSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQG 662
++A D +W+ + T G KLV+ FSPDG IV + I L + G
Sbjct: 375 VTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDG 434
Query: 663 E 663
+
Sbjct: 435 K 435
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 176 (67.0 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 187 WPHMQADQVHGLSLREI---------GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIK 237
W ++VH + LR G F ++CS Y++ T ++ +
Sbjct: 38 WDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSI-YSL---KTREGNVRVSR 93
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GH + C F + +IT S D +W +ET GH GD+ L+++ +
Sbjct: 94 ELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDG 152
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S + D I++W + D + GH + A+AF P Y + SDD TCR++
Sbjct: 153 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNG---YAFTTGSDDATCRLF 209
Query: 358 DARYSQ 363
D R Q
Sbjct: 210 DLRADQ 215
Score = 138 (53.6 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 52/229 (22%), Positives = 89/229 (38%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + +IT S D +W +ET
Sbjct: 75 NICSI-YSL---KTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIET 129
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
GH GD+ L+++ + S + D I++W + D + GH + A+A
Sbjct: 130 GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVA 189
Query: 335 FSPRPSAI-----------------YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDA 376
F P A +LL S D C I +S+ S R+ L D
Sbjct: 190 FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR-SGRLLLAGYDD- 247
Query: 377 ITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWS 425
+++ C +G TGS D+F ++W+
Sbjct: 248 FNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
Score = 107 (42.7 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 34/135 (25%), Positives = 59/135 (43%)
Query: 233 MQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
M+ + LRGH +Y + R +++ S D + IW T + + + A
Sbjct: 1 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 60
Query: 293 VSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSS 348
+ + VA D + ++ L +G + +S L GHTG ++ F Q+++S
Sbjct: 61 YAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN----QIITS 116
Query: 349 SDDGTCRIWDARYSQ 363
S D TC +WD Q
Sbjct: 117 SGDTTCALWDIETGQ 131
Score = 60 (26.2 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D +W+A+ G L GH L V +A +
Sbjct: 229 ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 287
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 288 WDSFLKIWN 296
Score = 60 (26.2 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S ++ + +G FV+G+ D ++W V DS GHE+D+N V F
Sbjct: 140 SGDVMSLSLAPDGRTFVSGACDASIKLWD-----VRDSMCR----QTFIGHESDINAVAF 190
Query: 457 SGCAVASRSAMSDA 470
A + DA
Sbjct: 191 FPNGYAFTTGSDDA 204
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 177 (67.4 bits), Expect = 8.5e-12, Sum P(3) = 8.5e-12
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFC--LASCRGHEGDITDLAV 293
I L GH VYC F +G + + DRL+ +W++ C A+ +GH G + +L
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVY-GDCDNYATLKGHSGAVMELHY 117
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+++ +++ SAS D + VW G + L+GHT V + + R + + + SDDGT
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQL--VCTGSDDGT 175
Query: 354 CRIWDAR 360
++WD R
Sbjct: 176 VKLWDIR 182
Score = 162 (62.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 234 QNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+ +K+L+GH V C R + V TGSDD VK+W + A+ + + LA
Sbjct: 142 ERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKK---AAIQTFQNTYQVLA 198
Query: 293 VSSNNTL--VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
V+ N+T + S D I+VW L +RGH +VT ++ S S Y LLS++
Sbjct: 199 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGS--Y-LLSNAM 255
Query: 351 DGTCRIWDARYSQYSPR 367
D T R+WD R ++P+
Sbjct: 256 DNTVRVWDVR--PFAPK 270
Score = 128 (50.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 36/148 (24%), Positives = 67/148 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N L+GH AV ++ G + + S D+ V +W ET + +GH + +
Sbjct: 101 NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPA 160
Query: 295 SNNT-LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
LV + S+D +++W + I + +T V A+ F+ Q++S D
Sbjct: 161 RRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSD---QIISGGIDND 216
Query: 354 CRIWDARYSQ--YSPRIYLPKPPDAITG 379
++WD R ++ Y+ R + D++TG
Sbjct: 217 IKVWDLRQNKLTYTMRGHA----DSVTG 240
Score = 72 (30.4 bits), Expect = 8.5e-12, Sum P(3) = 8.5e-12
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWE 619
+++ +D I VW+ L +++ GH+ S L + + +S D VWD+
Sbjct: 208 IISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRP 266
Query: 620 GTP----IRIYE--IGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNT 659
P ++I++ + F+ L+ +SPDG+ I +Y+ +T
Sbjct: 267 FAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Score = 70 (29.7 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRI 602
WS D + A D + VW+ +++ L GH+ S + HP P I
Sbjct: 293 WSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII 342
Score = 62 (26.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
+L C+++ +G+ GS+D F VW + L L GH +N V F
Sbjct: 288 LLRCSWSPDGSKIAAGSADRFVYVWDTTSRRI---------LYKLPGHAGSINEVAF 335
Score = 39 (18.8 bits), Expect = 8.5e-12, Sum P(3) = 8.5e-12
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 414 TGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSG 458
TGS D ++W K + + Q ++ VL+ ND + SG
Sbjct: 169 TGSDDGTVKLWDIRKKAAIQTFQNTYQ--VLAVTFNDTSDQIISG 211
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 149 (57.5 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 235 NIKKLR--GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM-ETAFCLASCRGHEGDITDL 291
N+ L+ GH V A FD SG + +G DR + +W++ G +G ITDL
Sbjct: 40 NVPNLQMFGHTAEVLVARFDPSGSYFASGGMDRQILLWNVFGDVKNYGVLNGCKGAITDL 99
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
S ++ +V +S+D + W G I +GH G V A+ S + L S SDD
Sbjct: 100 QWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSEL--LTSVSDD 157
Query: 352 GTCRIWDAR 360
T ++WD+R
Sbjct: 158 CTMKVWDSR 166
Score = 145 (56.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 39/128 (30%), Positives = 65/128 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITG-SDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
Q I+K +GH V + G ++T SDD +K+W + C+ + + +T +A
Sbjct: 126 QKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVA 184
Query: 293 VSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDG 352
++ T V D I++W L + VL+GH +T++A S S+ LLS+S D
Sbjct: 185 IAQQGTQVFIGGIDGAIKIWDLRNNHCSHVLKGHKDIITSLAISKDGSS---LLSNSMDN 241
Query: 353 TCRIWDAR 360
T RI+D +
Sbjct: 242 TVRIFDVK 249
Score = 97 (39.2 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 33/134 (24%), Positives = 57/134 (42%)
Query: 233 MQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
++N L G + A+ + R R V S D + W + + +GH G + L
Sbjct: 83 VKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALD 142
Query: 293 VSS-NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
V + L+ S S+D ++VW I + +TA+A + + + Q+ D
Sbjct: 143 VLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIE-EKYPLTAVAIAQQGT---QVFIGGID 198
Query: 352 GTCRIWDARYSQYS 365
G +IWD R + S
Sbjct: 199 GAIKIWDLRNNHCS 212
Score = 94 (38.1 bits), Expect = 9.4e-12, Sum P(2) = 9.4e-12
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDG 610
+ WS ++RFV A D + VW+A G L + L GH S +D HP I +S D
Sbjct: 275 VAWSRNSRFVGAGSSDKNVYVWSAT-GDLRYVLPGHEGSVNHVDFHPHQD-IILSCSSD- 331
Query: 611 RTI 613
RTI
Sbjct: 332 RTI 334
Score = 73 (30.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 23/61 (37%), Positives = 27/61 (44%)
Query: 396 QSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
Q H +L A++ N GSSD VWSA D VL GHE VN+V
Sbjct: 268 QEHNLLGVAWSRNSRFVGAGSSDKNVYVWSA----TGDLRY------VLPGHEGSVNHVD 317
Query: 456 F 456
F
Sbjct: 318 F 318
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 198 (74.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 42/120 (35%), Positives = 62/120 (51%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + ++ TGS D+ V++WS + GH G + LA S N +
Sbjct: 436 GHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYL 495
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
ASA D +++W L G LRGHT +++++FS S + S+S D T R+WD R
Sbjct: 496 ASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLV---ASASMDNTVRVWDIR 552
Score = 160 (61.4 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 36/129 (27%), Positives = 57/129 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ N RGH V+ + T S DR ++WS + L GH D+
Sbjct: 383 LKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVD 442
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ N+ +A+ S D +R+W G + + GH G V +AFSP Y L S+
Sbjct: 443 CVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGK--Y-LASAG 499
Query: 350 DDGTCRIWD 358
+D ++WD
Sbjct: 500 EDQRLKLWD 508
Score = 157 (60.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 42/136 (30%), Positives = 65/136 (47%)
Query: 236 IKKLRGHRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
IK LRGH VY F D SG +++ S+D V+ W +++ RGH + D+ V
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASG--LLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDV 404
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S + ++AS+D R+W P+ + GH V + F P + I + S D T
Sbjct: 405 SPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYI---ATGSTDKT 461
Query: 354 CRIWDARYSQYSPRIY 369
R+W R S R++
Sbjct: 462 VRLWSTRQGA-SVRLF 476
Score = 140 (54.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/107 (28%), Positives = 57/107 (53%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
+++ GHR V F +G+++ + +D+ +K+W + + RGH I+ L+ S
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLSFS 531
Query: 295 SNNTLVASASNDFVIRVWRL-------P-DGLPISVLRGHTGAVTAI 333
+++LVASAS D +RVW + P DG ++ +TG+ + I
Sbjct: 532 QDSSLVASASMDNTVRVWDIRNAHGSAPTDGCSSELIGQYTGSTSNI 578
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 164 (62.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + +++ H D V C F RF+ T S D+ VKIW+ T + H +
Sbjct: 649 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHF 708
Query: 294 SSNN--TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
++N+ L+A+AS+D +++W L + + GHT +V FSP L S S D
Sbjct: 709 TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKL---LASCSAD 765
Query: 352 GTCRIWDAR 360
GT ++WD +
Sbjct: 766 GTLKLWDVK 774
Score = 140 (54.3 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 34/130 (26%), Positives = 65/130 (50%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ ++N+ +L R H DAVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 602 KNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEV 661
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A S+++ +A+ S D +++W G + V H+ V F+ S L ++
Sbjct: 662 LCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNN-SHYLLLATA 720
Query: 349 SDDGTCRIWD 358
S D ++WD
Sbjct: 721 SSDCFLKLWD 730
Score = 130 (50.8 bits), Expect = 0.00057, P = 0.00057
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 242 HRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
H+D V C I + +F T S D+ KIWS E L RGH+G + S ++TL+
Sbjct: 1085 HQDTVLSCDISPDATKFSST-SADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLL 1143
Query: 301 ASASNDFVIRVWRLPDG------LPISVLRG---HTGAVTAIAFSPRPSAIYQLLSSSDD 351
A+ ++ IR+W + +G PI V G H G VT + FSP L+S+
Sbjct: 1144 ATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSK---MLVSAG-- 1198
Query: 352 GTCRIWDARYSQYSPRIY 369
G + W+ + S Y
Sbjct: 1199 GYLKWWNVVTGESSQTFY 1216
Score = 122 (48.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 34/133 (25%), Positives = 59/133 (44%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + G ++ + +++ ++ + T LA GH I S N L A
Sbjct: 802 VKCCSWSADGTRIMVAAKNKIF-LFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVAL 860
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQY 364
+ + +W + L ++ RGH V + FSP S+ L+SSDD T R+W+ +
Sbjct: 861 SQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSF---LTSSDDQTIRLWETKKVCK 917
Query: 365 SPRIYLPKPPDAI 377
+ I L + D +
Sbjct: 918 NSAIVLKQEIDVV 930
Score = 79 (32.9 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 26/111 (23%), Positives = 46/111 (41%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L N +L+ D + +W+ + G + H + D+ P + + S D +
Sbjct: 1054 LKNSKLLSWSFDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKI 1112
Query: 615 WDIWEGTPIRIYEIGRFK--LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W +P+ +E+ K + FS D T + DD G+I + N GE
Sbjct: 1113 WSFELLSPL--HELRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1161
Score = 66 (28.3 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDV 451
C ++ +G+ F+T S D R+W CK+S +Q E+DV+ EN+V
Sbjct: 888 CVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQ---EIDVVF-QENEV 936
Score = 65 (27.9 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 28/117 (23%), Positives = 50/117 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHS----LTGHSASSY---VLDVHPFNP 600
V V+S+D+ + + I +WN +G L+H L A+++ V D+ F+P
Sbjct: 1131 VRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLC-FSP 1189
Query: 601 RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
M G W++ G + + L S D + V D++G +Y+L
Sbjct: 1190 DSKMLVSAGGYLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVDNLGILYIL 1246
Score = 59 (25.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 26/110 (23%), Positives = 45/110 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I ++ D + ++++ D I VWN V L H + V D +S
Sbjct: 1007 VRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQET--VKDFKLLKNSKLLSWS 1063
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
+DG +W I G + + + ++ SPD T S +D +I+
Sbjct: 1064 FDGTVKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1113
Score = 49 (22.3 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
L+ H+ + C ++ + T+ TG + R+W+
Sbjct: 1124 LRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWN 1156
Score = 48 (22.0 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 607 GYDGRTIVWDIWEGTPIRIYE--IGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G DG + ++ RI++ IG K V +F+ DG +++ S D I + N Q E
Sbjct: 981 GEDGAVEILELLNN---RIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNW-QSE 1036
Query: 664 SQKDAKYDQFFLGDYRPLIRDS 685
+ Q + D++ L+++S
Sbjct: 1037 EYVFLQAHQETVKDFK-LLKNS 1057
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 164 (62.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + ++ H D + C F ++V T S D+ VKIW+ T CL H +
Sbjct: 647 ERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQF 706
Query: 294 SSNNT--LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
++ L+A+ S+D I++W L D + + GH AV+ FSP I S S D
Sbjct: 707 NNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYI---ASCSTD 763
Query: 352 GTCRIWD 358
GT ++W+
Sbjct: 764 GTVKLWN 770
Score = 155 (59.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ ++N+ +L R HRDAVY A F R + + + D+ ++++ E+ L H+ +I
Sbjct: 600 KSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEI 659
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
S+++ VA+ S D +++W G + V HT V F+ R Y L +
Sbjct: 660 LCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQ-YLLATC 718
Query: 349 SDDGTCRIWDAR 360
SDD ++WD +
Sbjct: 719 SDDTYIKLWDLK 730
Score = 148 (57.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+GH++A+ F + + +++ S D VK+W++ T H G + AVS + +
Sbjct: 1042 LKGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1100
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD-GTCRIW 357
+S S D ++W + L+GH V AFSP +LL++ DD G RIW
Sbjct: 1101 RFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSN----KLLATGDDKGDIRIW 1156
Query: 358 D 358
D
Sbjct: 1157 D 1157
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
+R +V F + +I+ + D ++++W+ + C+ +GH+ I D A N+ L+
Sbjct: 1004 YRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFLENSKLL- 1061
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H GAV + A SP S + S+S D T +IW
Sbjct: 1062 SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS---RFSSTSADKTAKIW 1114
Score = 119 (46.9 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 242 HRDAVYCAIFD-RSGRFVI-TGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F+ R G++++ T SDD +K+W ++ +C + GH ++ S N+
Sbjct: 697 HTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDY 756
Query: 300 VASASNDFVIRVWRL 314
+AS S D +++W +
Sbjct: 757 IASCSTDGTVKLWNV 771
Score = 99 (39.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + RS ++ + ++L+ ++ + T+ L H I + + LVA A
Sbjct: 800 VKCCSWSRSSDTILVVAKNKLL-LFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVAL 858
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ I +W + ++ RGHT V + FS S L+SS+D T RIW+
Sbjct: 859 SHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLF---LTSSEDQTIRIWE 909
Score = 74 (31.1 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
+L CA + +G+ F + S+D A++WS SSV +HEL GHE V FS
Sbjct: 1090 VLSCAVSPDGSRFSSTSADKTAKIWSFESSSV------LHEL---KGHEACVRCSAFS 1138
Score = 73 (30.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 28/111 (25%), Positives = 44/111 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L+N +L+ D + VWN G H + V P R + S D +
Sbjct: 1055 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFS-STSADKTAKI 1113
Query: 615 WDIWEGTPIRIYEI-GRFKLVD-GKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W +E + + ++E+ G V FSP + DD G I + + GE
Sbjct: 1114 WS-FESSSV-LHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGE 1162
Score = 72 (30.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDV 451
C ++++G++F+T S D R+W CKSS D+ ELDV+ H +V
Sbjct: 886 CVTFSSDGSLFLTSSEDQTIRIWETNKVCKSS--DAVLK-SELDVVF-HNGEV 934
Score = 67 (28.6 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 26/105 (24%), Positives = 46/105 (43%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
++ D + ++++ D I VWN V L GH + + D +S +DG
Sbjct: 1013 FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA--IKDFAFLENSKLLSWSFDGTV 1069
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
VW+I G + + R ++ SPDG+ S +D +I+
Sbjct: 1070 KVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1114
Score = 65 (27.9 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 569 ICVWNAVDGSLVH---SLTGHSAS----SYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGT 621
I +W+ + G L+H S+T +V D+ F+P M G WD+ G
Sbjct: 1153 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLS-FSPDSKMLVSSGGYLKWWDVTTGE 1211
Query: 622 PIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
++ + L SP+ V D++G +Y+L
Sbjct: 1212 SLQTFYTNGTNLKSIHVSPNFDVYVTVDNLGILYVL 1247
Score = 65 (27.9 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 28/102 (27%), Positives = 44/102 (43%)
Query: 571 VWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD-GRTIVWDIWEG------TPI 623
+W+ S++H L GH A P N +A G D G +WDI G + +
Sbjct: 1113 IWSFESSSVLHELKGHEACVRCSAFSPSNKLLA--TGDDKGDIRIWDILTGELLHFCSSV 1170
Query: 624 RIYEI----GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQ 661
+ E G + + D FSPD +V S + + + TG+
Sbjct: 1171 TVDEEEPTHGGW-VTDLSFSPDSKMLVSSGGYLKWWDVTTGE 1211
Score = 56 (24.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSA--------CKSSVEDSEQPIH 439
L+ H+ + C A++ + + TG R+W C S D E+P H
Sbjct: 1125 LKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTH 1179
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSA 588
+ V A+ C I +WN S V GH++
Sbjct: 851 DELVAVALSHCSIELWNIKSLSKVADCRGHTS 882
Score = 38 (18.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 4/19 (21%), Positives = 14/19 (73%)
Query: 1666 VNNYYRSLEAAKDDINVML 1684
+ +++R+ + +DD+ V++
Sbjct: 782 IKDFFRNADEQQDDVEVLV 800
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 164 (62.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 38/127 (29%), Positives = 61/127 (48%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + ++ H D + C F ++V T S D+ VKIW+ T CL H +
Sbjct: 648 ERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQF 707
Query: 294 SSNNT--LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
++ L+A+ S+D I++W L D + + GH AV+ FSP I S S D
Sbjct: 708 NNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYI---ASCSTD 764
Query: 352 GTCRIWD 358
GT ++W+
Sbjct: 765 GTVKLWN 771
Score = 155 (59.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 37/132 (28%), Positives = 66/132 (50%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ ++N+ +L R HRDAVY A F R + + + D+ ++++ E+ L H+ +I
Sbjct: 601 KSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEI 660
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
S+++ VA+ S D +++W G + V HT V F+ R Y L +
Sbjct: 661 LCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQ-YLLATC 719
Query: 349 SDDGTCRIWDAR 360
SDD ++WD +
Sbjct: 720 SDDTYIKLWDLK 731
Score = 148 (57.2 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+GH++A+ F + + +++ S D VK+W++ T H G + AVS + +
Sbjct: 1043 LKGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1101
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD-GTCRIW 357
+S S D ++W + L+GH V AFSP +LL++ DD G RIW
Sbjct: 1102 RFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSN----KLLATGDDKGDIRIW 1157
Query: 358 D 358
D
Sbjct: 1158 D 1158
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
+R +V F + +I+ + D ++++W+ + C+ +GH+ I D A N+ L+
Sbjct: 1005 YRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFLENSKLL- 1062
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H GAV + A SP S + S+S D T +IW
Sbjct: 1063 SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS---RFSSTSADKTAKIW 1115
Score = 119 (46.9 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 242 HRDAVYCAIFD-RSGRFVI-TGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F+ R G++++ T SDD +K+W ++ +C + GH ++ S N+
Sbjct: 698 HTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDY 757
Query: 300 VASASNDFVIRVWRL 314
+AS S D +++W +
Sbjct: 758 IASCSTDGTVKLWNV 772
Score = 99 (39.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + RS ++ + ++L+ ++ + T+ L H I + + LVA A
Sbjct: 801 VKCCSWSRSSDTILVVAKNKLL-LFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVAL 859
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ I +W + ++ RGHT V + FS S L+SS+D T RIW+
Sbjct: 860 SHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLF---LTSSEDQTIRIWE 910
Score = 74 (31.1 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
+L CA + +G+ F + S+D A++WS SSV +HEL GHE V FS
Sbjct: 1091 VLSCAVSPDGSRFSSTSADKTAKIWSFESSSV------LHEL---KGHEACVRCSAFS 1139
Score = 73 (30.8 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 28/111 (25%), Positives = 44/111 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L+N +L+ D + VWN G H + V P R + S D +
Sbjct: 1056 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFS-STSADKTAKI 1114
Query: 615 WDIWEGTPIRIYEI-GRFKLVD-GKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W +E + + ++E+ G V FSP + DD G I + + GE
Sbjct: 1115 WS-FESSSV-LHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGE 1163
Score = 72 (30.4 bits), Expect = 1.2e-11, Sum P(3) = 1.2e-11
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDV 451
C ++++G++F+T S D R+W CKSS D+ ELDV+ H +V
Sbjct: 887 CVTFSSDGSLFLTSSEDQTIRIWETNKVCKSS--DAVLK-SELDVVF-HNGEV 935
Score = 67 (28.6 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 26/105 (24%), Positives = 46/105 (43%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
++ D + ++++ D I VWN V L GH + + D +S +DG
Sbjct: 1014 FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA--IKDFAFLENSKLLSWSFDGTV 1070
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
VW+I G + + R ++ SPDG+ S +D +I+
Sbjct: 1071 KVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1115
Score = 65 (27.9 bits), Expect = 4.7e-11, Sum P(3) = 4.7e-11
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 569 ICVWNAVDGSLVH---SLTGHSAS----SYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGT 621
I +W+ + G L+H S+T +V D+ F+P M G WD+ G
Sbjct: 1154 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLS-FSPDSKMLVSSGGYLKWWDVTTGE 1212
Query: 622 PIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
++ + L SP+ V D++G +Y+L
Sbjct: 1213 SLQTFYTNGTNLKSIHVSPNFDVYVTVDNLGILYVL 1248
Score = 65 (27.9 bits), Expect = 7.5e-11, Sum P(3) = 7.5e-11
Identities = 28/102 (27%), Positives = 44/102 (43%)
Query: 571 VWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD-GRTIVWDIWEG------TPI 623
+W+ S++H L GH A P N +A G D G +WDI G + +
Sbjct: 1114 IWSFESSSVLHELKGHEACVRCSAFSPSNKLLA--TGDDKGDIRIWDILTGELLHFCSSV 1171
Query: 624 RIYEI----GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQ 661
+ E G + + D FSPD +V S + + + TG+
Sbjct: 1172 TVDEEEPTHGGW-VTDLSFSPDSKMLVSSGGYLKWWDVTTGE 1212
Score = 56 (24.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSA--------CKSSVEDSEQPIH 439
L+ H+ + C A++ + + TG R+W C S D E+P H
Sbjct: 1126 LKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTH 1180
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSA 588
+ V A+ C I +WN S V GH++
Sbjct: 852 DELVAVALSHCSIELWNIKSLSKVADCRGHTS 883
Score = 38 (18.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 4/19 (21%), Positives = 14/19 (73%)
Query: 1666 VNNYYRSLEAAKDDINVML 1684
+ +++R+ + +DD+ V++
Sbjct: 783 IKDFFRNADEQQDDVEVLV 801
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 177 (67.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DL 291
+ + ++ H D V C F ++ T S D+ VKIW T + + H +
Sbjct: 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHF 707
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
SN+ L+A+ SNDF +++W L + + GHT +V FSP L S S D
Sbjct: 708 TNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL---LASCSAD 764
Query: 352 GTCRIWDAR 360
GT R+WD R
Sbjct: 765 GTLRLWDVR 773
Score = 146 (56.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 33/128 (25%), Positives = 67/128 (52%)
Query: 233 MQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++N+ +L R H DAVY A F + G+ + + D+ ++++ ET L + HE ++
Sbjct: 603 IKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLC 662
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
A SS+++ +A+ S D +++W G + H+ V F+ + + + L + S+
Sbjct: 663 CAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLL-LATGSN 721
Query: 351 DGTCRIWD 358
D ++WD
Sbjct: 722 DFFLKLWD 729
Score = 132 (51.5 bits), Expect = 0.00035, P = 0.00035
Identities = 39/126 (30%), Positives = 61/126 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+ H++ V + R +++ S D VK+W++ T H+G + A+SS+ T
Sbjct: 1040 LQAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDAT 1098
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD-GTCRIW 357
+S S D ++W P+ L+GH G V AFS I LL++ DD G RIW
Sbjct: 1099 KFSSTSADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSL--DGI--LLATGDDNGEIRIW 1154
Query: 358 DARYSQ 363
+ Q
Sbjct: 1155 NVSDGQ 1160
Score = 132 (51.5 bits), Expect = 0.00035, P = 0.00035
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 242 HRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
H+ V CAI + +F T S D+ KIWS + L +GH G + A S + L+
Sbjct: 1084 HQGTVLSCAISSDATKFSST-SADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILL 1142
Query: 301 ASASNDFVIRVWRLPDG------LPISVLRG---HTGAVTAIAFSPRPSAIYQLLSSSDD 351
A+ ++ IR+W + DG PISV G H G VT + FSP L+S+
Sbjct: 1143 ATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT---LVSAG-- 1197
Query: 352 GTCRIWDARYSQYSPRIY 369
G + W+ S Y
Sbjct: 1198 GYLKWWNVATGDSSQTFY 1215
Score = 123 (48.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 33/133 (24%), Positives = 62/133 (46%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + G +I + ++++ ++ + T+ LA GH I S + L A
Sbjct: 801 VKCCSWSADGDKIIVAAKNKVL-LFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIAL 859
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQY 364
+ + + +W + L ++ RGH V + FSP S+ L++SDD T R+W+ +
Sbjct: 860 SQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSF---LTASDDQTIRVWETKKVCK 916
Query: 365 SPRIYLPKPPDAI 377
+ I L + D +
Sbjct: 917 NSAIVLKQEIDVV 929
Score = 116 (45.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH+ AV F G+ +I+ S+D ++++W+ +T + + H+ + D + ++ L+
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDSRLL 1059
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H G V + A S S + S+S D T +IW
Sbjct: 1060 -SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAIS---SDATKFSSTSADKTAKIW 1112
Score = 95 (38.5 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 46/191 (24%), Positives = 73/191 (38%)
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
E ++ +S + VA D I++ LP+ S GH AV I F+
Sbjct: 961 EAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKT--- 1017
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT----------------GKXXXXXXXX 388
L+SSS+D ++W+ + Y ++L + + G
Sbjct: 1018 LISSSEDSVIQVWNWQTGDY---VFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVIT 1074
Query: 389 XXXXXXLQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSG 446
HQ +L CA +++ T F + S+D A++WS D P+HEL G
Sbjct: 1075 GRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSF------DLLSPLHEL---KG 1125
Query: 447 HENDVNYVQFS 457
H V FS
Sbjct: 1126 HNGCVRCSAFS 1136
Score = 81 (33.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 33/119 (27%), Positives = 51/119 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASS-------YVLDVHPFNP 600
V +SLD + + I +WN DG L+HS S +V DV F+P
Sbjct: 1130 VRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVC-FSP 1188
Query: 601 --RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
+ +SAG G W++ G + + L SPD + V D++G +Y+L
Sbjct: 1189 DSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYIL 1245
Score = 81 (33.6 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 59/283 (20%), Positives = 102/283 (36%)
Query: 405 YNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCA- 460
++ +G+ F+T S D RVW CK+S +Q E+DV+ EN+ +
Sbjct: 890 FSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQ---EIDVVF-QENETMVLAVDNIRG 945
Query: 461 ---VASRSAMSDAFKEENVPKFKNSWFC---H-DNIVTCSRDGSA-IIWIPRSRRSHGKV 512
+A ++ D E V S C H + + DG+ II +P +R V
Sbjct: 946 LQLIAGKTGQIDYLPEAQV-----SCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV 1000
Query: 513 GRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXVNMIVWS----------LDNRFVLA 562
G H++ + + + L + +L+
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLS 1060
Query: 563 AIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTP 622
D + VWN + G + T H + + + + S D +W +P
Sbjct: 1061 WSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFS-STSADKTAKIWSFDLLSP 1119
Query: 623 IRIYEI-GRFKLVD-GKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
+ +E+ G V FS DG + DD G+I + N G+
Sbjct: 1120 L--HELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160
Score = 81 (33.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
RGH V+ +F G +T SDD+ +++W + C S + +I D+ N T+
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKV-CKNSAIVLKQEI-DVVFQENETM 936
Query: 300 VASASN 305
V + N
Sbjct: 937 VLAVDN 942
Score = 38 (18.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 1186 RNEDVG-TNYRDELKENPP--LRVRIRTKGILR--DTKSPSEQKSSTSVKDLPSAESDP 1239
RN G TN + + +P L G LR D +S +E+KS +VK + DP
Sbjct: 736 RNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKS-INVKRFFLSSEDP 793
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 197 (74.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G +S GHTG V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 158 (60.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 153 (58.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 153 (58.9 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 40/145 (27%), Positives = 64/145 (44%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ RGH AV C F G+++ + +DD VK+W + ++ GH G + + N
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVT-----AIAFSPRPSAI---YQL-LSS 348
L+AS S+D IR W L +S + G G V + SP P + Y +S
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRYAGSWVVGLSPPPKVVGCRYGAGVSR 261
Query: 349 SDDGTCRIWDARYSQYSPRIYLPKP 373
S +C ++ + + P P P
Sbjct: 262 SHHRSCSLFPGLPTAF-PDFLRPTP 285
Score = 81 (33.6 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 19/71 (26%), Positives = 38/71 (53%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP N + +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LASG 207
Query: 608 YDGRTI-VWDI 617
RTI WD+
Sbjct: 208 SSDRTIRFWDL 218
Score = 57 (25.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 176
Query: 618 WEG 620
G
Sbjct: 177 TAG 179
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 166 (63.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 42/154 (27%), Positives = 69/154 (44%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
KP + +K L + AV F+ G + +T D+ +K+W+ L + GH
Sbjct: 7 KPRGPELPQKRVKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
++ D A S +N+ + S D + +W + G + RGH G V + F+ + I
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVI-- 124
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT 378
LS S D + R WD R + P L + D I+
Sbjct: 125 -LSGSIDSSIRCWDCRSRRPEPVQTLDEARDGIS 157
Score = 112 (44.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 36/134 (26%), Positives = 60/134 (44%)
Query: 236 IKKLRGHRDAVYCAI--FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
++ GH V A FD S + +G D+ V +W + + + RGH G + +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSS--LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF 117
Query: 294 SSNNTLVASASNDFVIRVW----RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ T++ S S D IR W R P+ P+ L ++++ S +++LS S
Sbjct: 118 NEEATVILSGSIDSSIRCWDCRSRRPE--PVQTLDEARDGISSVKVSD-----HEVLSGS 170
Query: 350 DDGTCRIWDARYSQ 363
DG R +D R Q
Sbjct: 171 VDGRVRRYDLRMGQ 184
Score = 72 (30.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 19/70 (27%), Positives = 33/70 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMSAGYDG 610
+S D + L + +D + + + G L+ TGH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHV-VSCSEDG 257
Query: 611 RTIVWDIWEG 620
+ WD+ EG
Sbjct: 258 KVYFWDLVEG 267
Score = 48 (22.0 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
V++ D ++ W+ V+G+L +L L HP P + + G G W
Sbjct: 250 VVSCSEDGKVYFWDLVEGALALALPVGPGVVQSLAYHPTEPCLLTAMG--GSVHCW 303
Score = 44 (20.5 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 488 NIVTCSRDGSAIIW 501
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVYFW 262
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 197 (74.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G +S GHTG V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 168 (64.2 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ RGH AV C F G+++ + +DD VK+W + ++ GH G + + N
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
L+AS S+D IR W L +S + G G V ++ F+P +Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Score = 158 (60.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 153 (58.9 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 85 (35.0 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP N + +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LASG 207
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
RTI WD+ + + E + F+PDG
Sbjct: 208 SSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Score = 57 (25.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 176
Query: 618 WEG 620
G
Sbjct: 177 TAG 179
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 197 (74.4 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G +S GHTG V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 168 (64.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ RGH AV C F G+++ + +DD VK+W + ++ GH G + + N
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
L+AS S+D IR W L +S + G G V ++ F+P +Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Score = 158 (60.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 153 (58.9 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 85 (35.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP N + +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LASG 207
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
RTI WD+ + + E + F+PDG
Sbjct: 208 SSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 176
Query: 618 WEG 620
G
Sbjct: 177 TAG 179
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 197 (74.4 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G +S GHTG V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 169 (64.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ RGH AV C F G+++ + +DD VK+W + ++ GH G + + N
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
L+AS S+D IR W L +S + G G V +I F+P +Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLY 247
Score = 158 (60.7 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 153 (58.9 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 84 (34.6 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP N + +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LASG 207
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
RTI WD+ + + E + F+PDG
Sbjct: 208 SSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDG 243
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 176
Query: 618 WEG 620
G
Sbjct: 177 TAG 179
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 192 (72.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 43/124 (34%), Positives = 69/124 (55%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q + L GH V C FD+ +I+GS D+ ++IW+ T+ C++ GH + L +
Sbjct: 304 QQVALLEGHSSGVTCLQFDQCK--LISGSMDKTIRIWNYRTSECISILHGHTDSV--LCL 359
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+ ++TL+ S S D +++W G I+ LRGHTG V ++ R + +LS SDD T
Sbjct: 360 TFDSTLLVSGSADCTVKLWHFSGGKRIT-LRGHTGPVNSVRII-RDRGL--VLSGSDDST 415
Query: 354 CRIW 357
+IW
Sbjct: 416 IKIW 419
Score = 157 (60.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 40/121 (33%), Positives = 58/121 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
LRGH V R V++GSDD +KIWS+ET CL + H G + LA++ +
Sbjct: 388 LRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRL 447
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
S S D I+ W + + L GH V IA +L+S + DG ++W+
Sbjct: 448 F--SCSLDGTIKQWDIEKKKCVHTLFGHIEGVWEIAADH-----LRLISGAHDGVVKVWE 500
Query: 359 A 359
A
Sbjct: 501 A 501
Score = 142 (55.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 38/119 (31%), Positives = 57/119 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH D V C R+ + +GS D +++W++ T +A GH +T L
Sbjct: 269 LSGHSDGVMCLQLVRN--ILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQFDQCKL 326
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+ S S D IR+W IS+L GHT +V + F S + L+S S D T ++W
Sbjct: 327 I--SGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFD---STL--LVSGSADCTVKLW 378
Score = 56 (24.8 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 25/95 (26%), Positives = 42/95 (44%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D+R + + +D I W+ VH+L GH V ++ + R+ +S +DG VW
Sbjct: 444 DSR-LFSCSLDGTIKQWDIEKKKCVHTLFGHIEG--VWEIAADHLRL-ISGAHDGVVKVW 499
Query: 616 DIWE--------GTPIRIYEIGRFKLVDGKFSPDG 642
+ E P+ +G ++V G S DG
Sbjct: 500 EACECVHTLKNHSEPVTSVALGDCEVVSG--SEDG 532
Score = 54 (24.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 18/70 (25%), Positives = 29/70 (41%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + D VL+ D I +W+ + +H+ + H L + + R+ S
Sbjct: 395 VNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALA--DSRL-FSCS 451
Query: 608 YDGRTIVWDI 617
DG WDI
Sbjct: 452 LDGTIKQWDI 461
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 175 (66.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F G+ +IT S D +W +ET + GH GD+ L++S +
Sbjct: 137 RELPGHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
S + D ++W + DG+ GH + A++F P Y + SDD TCR+
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSG---YAFATGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 108 (43.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDG----QIIT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 63 (27.2 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ G L GH L V +A +
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLRIWN 340
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 184 (69.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 42/121 (34%), Positives = 64/121 (52%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH +Y F R GR + +GS DR V++W +E L +G +T +A+S + V
Sbjct: 386 GHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYV 444
Query: 301 ASASNDFVIRVWRLPDGLPISVLRG---HTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
A+ S D +RVW L G P+ L G H +V ++AFSP L++ S D T ++W
Sbjct: 445 AAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGR---DLVTGSLDKTIKLW 501
Query: 358 D 358
+
Sbjct: 502 E 502
Score = 155 (59.6 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 32/108 (29%), Positives = 56/108 (51%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIR 310
F G+++ TG++D+ +++W + T GHE DI L + + +AS S D +R
Sbjct: 354 FSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVR 413
Query: 311 VWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+W + +G ++V G VT +A SP + + S D + R+WD
Sbjct: 414 LWDIENGTALTVFTIEDG-VTTVAISPDTKYV---AAGSLDKSVRVWD 457
Score = 155 (59.6 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 40/140 (28%), Positives = 69/140 (49%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET------------AFCLASCRGHEGDI 288
GH+D+VY F +GR ++TGS D+ +K+W + T C+ + GH +
Sbjct: 472 GHKDSVYSVAFSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFV 531
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
+A++ +N V S S D ++ W G +L+GH +V ++A P P+ + +
Sbjct: 532 LSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVA--PSPTGGF-FATG 588
Query: 349 SDDGTCRIWDARYSQYSPRI 368
S D RIW Y++ R+
Sbjct: 589 SGDMRARIWS--YTRMDNRM 606
Score = 64 (27.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
LQ H+ ++ A + G F TGS D AR+WS
Sbjct: 566 LQGHKNSVISVAPSPTGGFFATGSGDMRARIWS 598
Score = 58 (25.5 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
DN++V++ D + W+ GS L GH S + P A +G D R +W
Sbjct: 539 DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSG-DMRARIW 597
Score = 48 (22.0 bits), Expect = 5.4e-08, Sum P(3) = 5.4e-08
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 404 AYNANGTVFVTGSSDTFARVW 424
A++ NG VTGS D ++W
Sbjct: 481 AFSPNGRDLVTGSLDKTIKLW 501
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 181 (68.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 138
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 139 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 194
Query: 356 IW 357
+W
Sbjct: 195 VW 196
Score = 159 (61.0 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 39 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 98
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 99 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 155
Query: 359 AR 360
+
Sbjct: 156 VQ 157
Score = 151 (58.2 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 115 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 174
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 175 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 231
Score = 149 (57.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 241 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 300
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 301 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 345
Score = 56 (24.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 276 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 334
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 335 VDQTVKVWE 343
Score = 51 (23.0 bits), Expect = 6.9e-10, Sum P(3) = 6.9e-10
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 178 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 214
Score = 50 (22.7 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 300
Query: 616 D 616
D
Sbjct: 301 D 301
Score = 42 (19.8 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 316 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 345
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 181 (68.8 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD +G+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL-SSSDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L+ SSS+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV----RPNQDGTLIASSSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 158 (60.7 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Score = 147 (56.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/123 (27%), Positives = 63/123 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W + T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
+ + + TL+AS+SND +RVW + + LR H V I+++P SA +L ++
Sbjct: 240 VRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPE-SAHPTILEATG 298
Query: 351 DGT 353
T
Sbjct: 299 SET 301
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 28/108 (25%), Positives = 55/108 (50%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + CL + GH+ + + V + S ++D +R+W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCTKTLSAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 60 (26.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWD 616
F+L+ D I +W+ G + +L GH + VHP I A D +T+ +WD
Sbjct: 310 FLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCA--DDKTLRIWD 366
Score = 54 (24.1 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 54 (24.1 bits), Expect = 2.9e-08, Sum P(2) = 2.9e-08
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++A D I +W G V + TGH +V V P +++ + +T+ VW
Sbjct: 207 IVSASRDKTIKMWEVATGYCVKTFTGHR--EWVRMVRPNQDGTLIASSSNDQTVRVW 261
Score = 47 (21.6 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 11/59 (18%), Positives = 26/59 (44%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
+++++ D + +W+ + +L+ H LD H P + ++ D VW+
Sbjct: 351 KYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 408
Score = 37 (18.1 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 489 IVTCSRDGSAIIWIPRSRR 507
IV+C+ D + IW +++R
Sbjct: 353 IVSCADDKTLRIWDYKNKR 371
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 189 (71.6 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 43/123 (34%), Positives = 63/123 (51%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH V +FD +I+G D +K+W+ T C+A+ RGHE + ++V
Sbjct: 416 VKTLTGHTKGVRALVFDNQK--LISGGLDSTIKVWNYHTGQCIATYRGHEDAV--VSVDF 471
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D +RVW + D LRGHT V + + I+ S+SDD T R
Sbjct: 472 TNKSIVSGSADHTVRVWHV-DSRTCYTLRGHTDWVNHVKIHSASNTIF---SASDDTTIR 527
Query: 356 IWD 358
+WD
Sbjct: 528 MWD 530
Score = 180 (68.4 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 44/127 (34%), Positives = 67/127 (52%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
IK GH D V C F+R ++++TGS D +KIW +++ C+ + GH + L V
Sbjct: 376 IKTFTGHSDGVTCLQFNR--KYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVRAL-VFD 432
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N L+ S D I+VW G I+ RGH AV ++ F+ + ++S S D T R
Sbjct: 433 NQKLI-SGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNK-----SIVSGSADHTVR 486
Query: 356 IW--DAR 360
+W D+R
Sbjct: 487 VWHVDSR 493
Score = 132 (51.5 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 33/105 (31%), Positives = 52/105 (49%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q I RGH DAV F + + +++GS D V++W +++ C + RGH + + +
Sbjct: 454 QCIATYRGHEDAVVSVDF--TNKSIVSGSADHTVRVWHVDSRTCY-TLRGHTDWVNHVKI 510
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVL-----RGHTGAVTAI 333
S + + SAS+D IR+W + I V GH G V I
Sbjct: 511 HSASNTIFSASDDTTIRMWDMNSNECIKVFGGMENNGHIGQVQCI 555
Score = 60 (26.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 561 LAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEG 620
L + +D I +W+ G + + GH + + F RI +S +D VWD+ G
Sbjct: 642 LTSALDNTIKLWDVATGKCIRTQFGHIEGVWSIAADTF--RI-ISGAHDRLIKVWDLQNG 698
Score = 55 (24.4 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 552 VWSL--DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYV 592
VWS+ D +++ D I VW+ +G +H+ + +S+ S V
Sbjct: 671 VWSIAADTFRIISGAHDRLIKVWDLQNGKCLHTFSNNSSVSCV 713
Score = 43 (20.2 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 1104 GDVNRCVK---LENGH--GKFSSNSETSCYG 1129
G +R +K L+NG FS+NS SC G
Sbjct: 684 GAHDRLIKVWDLQNGKCLHTFSNNSSVSCVG 714
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 176 (67.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 187 WPHMQADQVHGLSLREI---------GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIK 237
W ++VH + LR G F ++CS Y++ T ++ +
Sbjct: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSI-YSL---KTREGNVRVSR 137
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GH + C F + +IT S D +W +ET GH GD+ L+++ +
Sbjct: 138 ELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDG 196
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S + D I++W + D + GH + A+AF P Y + SDD TCR++
Sbjct: 197 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNG---YAFTTGSDDATCRLF 253
Query: 358 DARYSQ 363
D R Q
Sbjct: 254 DLRADQ 259
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/229 (22%), Positives = 89/229 (38%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + +IT S D +W +ET
Sbjct: 119 NICSI-YSL---KTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIET 173
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
GH GD+ L+++ + S + D I++W + D + GH + A+A
Sbjct: 174 GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVA 233
Query: 335 FSPRPSAI-----------------YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDA 376
F P A +LL S D C I +S+ S R+ L D
Sbjct: 234 FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR-SGRLLLAGYDD- 291
Query: 377 ITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWS 425
+++ C +G TGS D+F ++W+
Sbjct: 292 FNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN----QIIT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 60 (26.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D +W+A+ G L GH L V +A +
Sbjct: 273 ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S ++ + +G FV+G+ D ++W V DS GHE+D+N V F
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWD-----VRDSMCR----QTFIGHESDINAVAF 234
Query: 457 SGCAVASRSAMSDA 470
A + DA
Sbjct: 235 FPNGYAFTTGSDDA 248
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 176 (67.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 187 WPHMQADQVHGLSLREI---------GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIK 237
W ++VH + LR G F ++CS Y++ T ++ +
Sbjct: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSI-YSL---KTREGNVRVSR 137
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GH + C F + +IT S D +W +ET GH GD+ L+++ +
Sbjct: 138 ELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDG 196
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S + D I++W + D + GH + A+AF P Y + SDD TCR++
Sbjct: 197 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNG---YAFTTGSDDATCRLF 253
Query: 358 DARYSQ 363
D R Q
Sbjct: 254 DLRADQ 259
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/229 (22%), Positives = 89/229 (38%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + +IT S D +W +ET
Sbjct: 119 NICSI-YSL---KTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIET 173
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
GH GD+ L+++ + S + D I++W + D + GH + A+A
Sbjct: 174 GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVA 233
Query: 335 FSPRPSAI-----------------YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDA 376
F P A +LL S D C I +S+ S R+ L D
Sbjct: 234 FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR-SGRLLLAGYDD- 291
Query: 377 ITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWS 425
+++ C +G TGS D+F ++W+
Sbjct: 292 FNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN----QIIT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 60 (26.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D +W+A+ G L GH L V +A +
Sbjct: 273 ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S ++ + +G FV+G+ D ++W V DS GHE+D+N V F
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWD-----VRDSMCR----QTFIGHESDINAVAF 234
Query: 457 SGCAVASRSAMSDA 470
A + DA
Sbjct: 235 FPNGYAFTTGSDDA 248
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 176 (67.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 187 WPHMQADQVHGLSLREI---------GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIK 237
W ++VH + LR G F ++CS Y++ T ++ +
Sbjct: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSI-YSL---KTREGNVRVSR 137
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GH + C F + +IT S D +W +ET GH GD+ L+++ +
Sbjct: 138 ELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDG 196
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S + D I++W + D + GH + A+AF P Y + SDD TCR++
Sbjct: 197 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNG---YAFTTGSDDATCRLF 253
Query: 358 DARYSQ 363
D R Q
Sbjct: 254 DLRADQ 259
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/229 (22%), Positives = 89/229 (38%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + +IT S D +W +ET
Sbjct: 119 NICSI-YSL---KTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIET 173
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
GH GD+ L+++ + S + D I++W + D + GH + A+A
Sbjct: 174 GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVA 233
Query: 335 FSPRPSAI-----------------YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDA 376
F P A +LL S D C I +S+ S R+ L D
Sbjct: 234 FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR-SGRLLLAGYDD- 291
Query: 377 ITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWS 425
+++ C +G TGS D+F ++W+
Sbjct: 292 FNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN----QIIT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 60 (26.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D +W+A+ G L GH L V +A +
Sbjct: 273 ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S ++ + +G FV+G+ D ++W V DS GHE+D+N V F
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWD-----VRDSMCR----QTFIGHESDINAVAF 234
Query: 457 SGCAVASRSAMSDA 470
A + DA
Sbjct: 235 FPNGYAFTTGSDDA 248
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 176 (67.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 187 WPHMQADQVHGLSLREI---------GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIK 237
W ++VH + LR G F ++CS Y++ T ++ +
Sbjct: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSI-YSL---KTREGNVRVSR 137
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GH + C F + +IT S D +W +ET GH GD+ L+++ +
Sbjct: 138 ELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDG 196
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S + D I++W + D + GH + A+AF P Y + SDD TCR++
Sbjct: 197 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNG---YAFTTGSDDATCRLF 253
Query: 358 DARYSQ 363
D R Q
Sbjct: 254 DLRADQ 259
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/229 (22%), Positives = 89/229 (38%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + +IT S D +W +ET
Sbjct: 119 NICSI-YSL---KTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIET 173
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
GH GD+ L+++ + S + D I++W + D + GH + A+A
Sbjct: 174 GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVA 233
Query: 335 FSPRPSAI-----------------YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDA 376
F P A +LL S D C I +S+ S R+ L D
Sbjct: 234 FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR-SGRLLLAGYDD- 291
Query: 377 ITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWS 425
+++ C +G TGS D+F ++W+
Sbjct: 292 FNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN----QIIT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 60 (26.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D +W+A+ G L GH L V +A +
Sbjct: 273 ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S ++ + +G FV+G+ D ++W V DS GHE+D+N V F
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWD-----VRDSMCR----QTFIGHESDINAVAF 234
Query: 457 SGCAVASRSAMSDA 470
A + DA
Sbjct: 235 FPNGYAFTTGSDDA 248
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 176 (67.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 49/186 (26%), Positives = 80/186 (43%)
Query: 187 WPHMQADQVHGLSLREI---------GGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIK 237
W ++VH + LR G F ++CS Y++ T ++ +
Sbjct: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSI-YSL---KTREGNVRVSR 137
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+L GH + C F + +IT S D +W +ET GH GD+ L+++ +
Sbjct: 138 ELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDG 196
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S + D I++W + D + GH + A+AF P Y + SDD TCR++
Sbjct: 197 RTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNG---YAFTTGSDDATCRLF 253
Query: 358 DARYSQ 363
D R Q
Sbjct: 254 DLRADQ 259
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/229 (22%), Positives = 89/229 (38%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + +IT S D +W +ET
Sbjct: 119 NICSI-YSL---KTREGNVRVSRELPGHTGYLSCCRFLDDNQ-IITSSGDTTCALWDIET 173
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
GH GD+ L+++ + S + D I++W + D + GH + A+A
Sbjct: 174 GQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVA 233
Query: 335 FSPRPSAI-----------------YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDA 376
F P A +LL S D C I +S+ S R+ L D
Sbjct: 234 FFPNGYAFTTGSDDATCRLFDLRADQELLMYSHDNIICGITSVAFSR-SGRLLLAGYDD- 291
Query: 377 ITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWS 425
+++ C +G TGS D+F ++W+
Sbjct: 292 FNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 108 (43.1 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDN----QIIT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 60 (26.2 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D +W+A+ G L GH L V +A +
Sbjct: 273 ITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
Score = 60 (26.2 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 20/74 (27%), Positives = 31/74 (41%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S ++ + +G FV+G+ D ++W V DS GHE+D+N V F
Sbjct: 184 SGDVMSLSLAPDGRTFVSGACDASIKLWD-----VRDSMCR----QTFIGHESDINAVAF 234
Query: 457 SGCAVASRSAMSDA 470
A + DA
Sbjct: 235 FPNGYAFTTGSDDA 248
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 175 (66.7 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F G+ +IT S D +W +ET + GH GD+ L++S +
Sbjct: 137 RELPGHTGYLSCCRFLDDGQ-IITSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
S + D ++W + DG+ GH + A++F P Y + SDD TCR+
Sbjct: 196 LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSG---YAFATGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 108 (43.1 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDG----QIIT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 61 (26.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 17/69 (24%), Positives = 28/69 (40%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ G L GH L V +A +
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLRIWN 340
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 172 (65.6 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 40/124 (32%), Positives = 62/124 (50%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ + H + L S
Sbjct: 98 LRTLLGHK-ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G + GH+G V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHPSE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 161 (61.7 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 38/126 (30%), Positives = 59/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + +S GR + TG DD V +WS+ C+ S GH I L +S
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P S + S S D
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV---ASGSLDTDI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDVR 135
Score = 149 (57.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V K + L GH + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + VAS S D I++W + I + HT AV + FSP L S++
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 142 (55.0 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 32/114 (28%), Positives = 52/114 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V++ I K + H AV C F G+++ + +DD VK+W + + GH G +
Sbjct: 134 VRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVN 193
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
+ + L+AS S+D IR W L +S + V I F+P +Y
Sbjct: 194 VVEFHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDGCCLY 247
Score = 90 (36.7 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 25/96 (26%), Positives = 46/96 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ TGHS V++ HP +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFHP--SEYLLASG 207
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
RTI WD+ + + E + F+PDG
Sbjct: 208 SSDRTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 243
Score = 44 (20.5 bits), Expect = 2.7e-11, Sum P(3) = 2.7e-11
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1188 EDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESSL 1247
ED ++ +K N P+ V+ T P ++ T + P A S P+P +E S+
Sbjct: 407 EDEPITAKEAVKPNQPVEVQ---------TPLPKQELPETFQRP-PIASSTPMPRAEPSV 456
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 158 (60.7 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 45/125 (36%), Positives = 62/125 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLAS--CRGHEGDITDLAVSSN 296
L GH VY F S R V+TGS DR +K+W ++ +C + C D+ L S
Sbjct: 404 LTGHIGKVYTGKFINSNR-VVTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSG- 461
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRG-HTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
T +AS D +R W G P VL H G +T+I SP + Q+L++S D T +
Sbjct: 462 -THLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTN--QILTNSRDHTLK 518
Query: 356 IWDAR 360
I D R
Sbjct: 519 IIDIR 523
Score = 148 (57.2 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K+ GH +YC F+ G + TG D+ VK+W + + ++ G I ++ S N
Sbjct: 318 KRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPN 377
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ + SND R+W G L GH G V F ++++ S D T ++
Sbjct: 378 DESILGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSN----RVVTGSHDRTIKL 433
Query: 357 WD 358
WD
Sbjct: 434 WD 435
Score = 104 (41.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 40/180 (22%), Positives = 72/180 (40%)
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
GH +I +A +S L+A+ D ++VW + G S L G + ++ +++FSP +I
Sbjct: 322 GHNSEIYCMAFNSIGNLLATGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESI 381
Query: 343 YQLLSSSDDGTCRIWDARYSQ-------YSPRIYLPKPPDA---ITGKXXXXXXXXXXXX 392
L +S+D + R+W+ + + ++Y K ++ +TG
Sbjct: 382 ---LGTSNDNSARLWNTELGRSRHTLTGHIGKVYTGKFINSNRVVTGSHDRTIKLWDLQK 438
Query: 393 XXLQSHQILC---C----AYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLS 445
+ I C C +GT +G D R W + IHE + S
Sbjct: 439 GYC-TRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNAGEPTQVLSSIHEGQITS 497
Score = 89 (36.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTG-HSASSYVLDVHPFNP--RIAMSAGYD 609
WS D R++ + +D IC+W+A +G V LT H+ S V ++P I +SA D
Sbjct: 547 WSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCS-WSPLANIFISADKD 605
Query: 610 GRTIVWD 616
I W+
Sbjct: 606 KNIIQWE 612
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 7/25 (28%), Positives = 11/25 (44%)
Query: 601 RIAMSAGYDGRTIVWDIWEGTPIRI 625
R S DG +WD G +++
Sbjct: 552 RYIASGSIDGSICIWDATNGKTVKV 576
Score = 40 (19.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 5/25 (20%), Positives = 12/25 (48%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVW 424
+ CC+++ +F++ D W
Sbjct: 587 VCCCSWSPLANIFISADKDKNIIQW 611
Score = 40 (19.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 21/107 (19%), Positives = 39/107 (36%)
Query: 565 MDCRICVWNAVDGSLVHSLTG-HSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPI 623
+D + W++ G L+ H + P N ++ D + DI I
Sbjct: 469 VDHSVRFWDSNAGEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTI 528
Query: 624 RIYEIGRFK----LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
R ++ ++ +SPDG I G I + + G++ K
Sbjct: 529 RTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGSICIWDATNGKTVK 575
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 170 (64.9 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 264 DRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVL 323
D+ V++WS + + GH G + L+ S N +ASA D +++W L G L
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 324 RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
RGHT ++T++AFSP I S+S D + R+WD R
Sbjct: 61 RGHTDSITSLAFSPDSGLI---ASASMDNSVRVWDIR 94
Score = 143 (55.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 27/82 (32%), Positives = 46/82 (56%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q+ +++ GHR V F +G+++ + +D+ +K+W + + RGH IT
Sbjct: 10 QQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITS 69
Query: 291 LAVSSNNTLVASASNDFVIRVW 312
LA S ++ L+ASAS D +RVW
Sbjct: 70 LAFSPDSGLIASASMDNSVRVW 91
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 167 (63.8 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 42/154 (27%), Positives = 71/154 (46%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
+P + QK +K L + AV F+ G + +T D+ +K+W+ L + GH
Sbjct: 9 RPPELPQK--RLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
++ D A S +N+ + S D + +W + G + RGH G V + F+ + I
Sbjct: 67 GYEVLDAAGSFDNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVI-- 124
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT 378
LS S D + R WD R + P L + D ++
Sbjct: 125 -LSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVS 157
Score = 111 (44.1 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 36/134 (26%), Positives = 60/134 (44%)
Query: 236 IKKLRGHRDAVYCAI--FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
++ GH V A FD S + +G D+ V +W + + + RGH G + +
Sbjct: 60 LRTYSGHGYEVLDAAGSFDNSS--LCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF 117
Query: 294 SSNNTLVASASNDFVIRVW----RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ T++ S S D IR W R P+ P+ L V+++ S +++L+ S
Sbjct: 118 NEEATVILSGSIDSSIRCWDCRSRRPE--PVQTLDEARDGVSSVKVSD-----HEILAGS 170
Query: 350 DDGTCRIWDARYSQ 363
DG R +D R Q
Sbjct: 171 VDGRVRRYDLRMGQ 184
Score = 67 (28.6 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMSAGYDG 610
+S D + L + +D + + + G L+ GH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHV-VSCSEDG 257
Query: 611 RTIVWDIWEG 620
+ WD+ EG
Sbjct: 258 KVFFWDLVEG 267
Score = 53 (23.7 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
V++ D ++ W+ V+G+L +L S L HP P + + G G W
Sbjct: 250 VVSCSEDGKVFFWDLVEGALALALPVGSGVVQSLAYHPTEPCLLTAMG--GSVQCW 303
Score = 45 (20.9 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 488 NIVTCSRDGSAIIW 501
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 169 (64.5 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 40/132 (30%), Positives = 67/132 (50%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR ++ IF +++ S+D ++IW ET S +GH + D+A +
Sbjct: 104 LTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGK 163
Query: 299 LVASASNDFVIRVWRLPDGLP-ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
L+AS S D I++W I + GH V+++AF P + Y +LS+S D T ++W
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP--AGDY-VLSASRDRTIKMW 220
Query: 358 DARYSQYSPRIY 369
+ + Y + Y
Sbjct: 221 EVA-TGYCVKTY 231
Score = 166 (63.5 bits), Expect = 7.3e-10, Sum P(2) = 7.3e-10
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 196 HGLSLREIGGGFKKHHRAPSVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSG 255
H S++++ F + + CSA +I K Q + IK + GH V F +G
Sbjct: 149 HTDSVQDVA--FDAQGKLLASCSADLSI-KLWDFQQSYECIKTMHGHDHNVSSVAFVPAG 205
Query: 256 RFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLP 315
+V++ S DR +K+W + T +C+ + GH + + V ++ A+ SND IRVW L
Sbjct: 206 DYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSIFATCSNDQTIRVW-LT 264
Query: 316 DGLPISV-LRGHTGAVTAIAFSPRPSA 341
+ V LR H V IA++P +A
Sbjct: 265 NSKDCKVELRDHEHTVECIAWAPEAAA 291
Score = 156 (60.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 34/122 (27%), Positives = 61/122 (50%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAF-CLASCRGHEGDITDLAVSS 295
+ L+GH D+V FD G+ + + S D +K+W + ++ C+ + GH+ +++ +A
Sbjct: 144 RSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVP 203
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
V SAS D I++W + G + GH V + S I+ + S+D T R
Sbjct: 204 AGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGS-IFA--TCSNDQTIR 260
Query: 356 IW 357
+W
Sbjct: 261 VW 262
Score = 150 (57.9 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 255 GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRL 314
G F+ +GS D+ ++IW + CL + GH+ + LA + SAS+D IRVW L
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVWDL 368
Query: 315 PDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H T+I F A ++S S D T ++W+ R
Sbjct: 369 RNKRCMKTLYAHQHFCTSIDFH---KAHPYVISGSVDQTVKVWECR 411
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 41/126 (32%), Positives = 60/126 (47%)
Query: 252 DRSGRFVITGSDDRLVKIWSME-TAFCLA-SCRGHEGDITDLAVSSNNT------LVASA 303
D++ R +T S D V++ E T C+A + I + A + N +AS
Sbjct: 256 DQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKGHHQGPFLASG 315
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQ 363
S D IR+W + GL + L GH V +AF P Y L+S+SDD T R+WD R +
Sbjct: 316 SRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAF--HPGGKY-LVSASDDKTIRVWDLRNKR 372
Query: 364 YSPRIY 369
+Y
Sbjct: 373 CMKTLY 378
Score = 104 (41.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 280 SCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRP 339
S GH IT + L+ SAS D IR+W G L+GHT +V +AF +
Sbjct: 103 SLTGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQG 162
Query: 340 SAIYQLLSSSDDGTCRIWDARYS 362
L S S D + ++WD + S
Sbjct: 163 KL---LASCSADLSIKLWDFQQS 182
Score = 61 (26.5 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
F+ + D I +W+ G + +L+GH L HP + +SA D +TI VWD+
Sbjct: 311 FLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHP-GGKYLVSAS-DDKTIRVWDL 368
Score = 54 (24.1 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 558 RFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
+++++A D I VW+ + + +L H +D H +P + +S D VW+
Sbjct: 352 KYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYV-ISGSVDQTVKVWE 409
Score = 53 (23.7 bits), Expect = 3.4e-11, Sum P(3) = 3.4e-11
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 409 GTVFVTGSSDTFARVWSA----CKSSVEDSEQPI 438
G++F T S+D RVW CK + D E +
Sbjct: 247 GSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTV 280
Score = 42 (19.8 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 404 AYNANGTVFVTGSSDTFARVW 424
A++ G V+ S D RVW
Sbjct: 346 AFHPGGKYLVSASDDKTIRVW 366
Score = 37 (18.1 bits), Expect = 7.1e-09, Sum P(3) = 7.1e-09
Identities = 14/48 (29%), Positives = 18/48 (37%)
Query: 409 GTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
G +GS D R+W L LSGH+N V + F
Sbjct: 309 GPFLASGSRDKTIRIWDVSVGLC---------LLTLSGHDNWVRGLAF 347
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 193 (73.0 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 43/127 (33%), Positives = 66/127 (51%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH V C F + +V TGS DR V++W++ T + GH G+IT LA S + +
Sbjct: 401 GHEQDVDCVCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTL 460
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGH-TGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
ASA + I +W L G + +RGH G + ++++S + L+S DGT R+WD
Sbjct: 461 ASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNV---LVSGGADGTVRVWDV 517
Query: 360 RYSQYSP 366
+ P
Sbjct: 518 MGPAHDP 524
Score = 147 (56.8 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+GH V+ + G + ++G D+ ++W + GHE D+ + N+
Sbjct: 358 KGHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAY 417
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
V + S+D +R+W + G + + GHTG +TA+A S R L S+ D G+ +WD
Sbjct: 418 VFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACS-RDGKT--LASADDHGSILLWD 473
Score = 122 (48.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 33/135 (24%), Positives = 57/135 (42%)
Query: 235 NIKKLRGHRDAVYCAIFDRSG------------RFVITGSDDRLVKIWSMETAFCLASCR 282
N ++L GH VY F S R++++ S DR +++WS++ C+ +
Sbjct: 299 NSRRLIGHSGPVYAVAFAPSATPSENAVAPTNARWLLSSSADRTIRLWSLDLWQCMVVYK 358
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
GH+ + DL S +D R+W + GH V + F P + +
Sbjct: 359 GHDQPVWDLQWGPFGHYFVSGGHDKTARLWVTDHIRQQRIFVGHEQDVDCVCFHPNSAYV 418
Query: 343 YQLLSSSDDGTCRIW 357
+ + S D T R+W
Sbjct: 419 F---TGSSDRTVRMW 430
Score = 69 (29.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 28/123 (22%), Positives = 45/123 (36%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + S D + + +A I +W+ G L+ + GH + +S G
Sbjct: 448 ITALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGG 507
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSP-DGTSIVLSDDVGQIYLLNTGQGESQK 666
DG VWD+ G P GR G + DG S ++ + G G +K
Sbjct: 508 ADGTVRVWDVM-G-PAHDPSQGRVAGEGGAGTKIDGASSAAANSTQTPGTVGPGMGSGKK 565
Query: 667 DAK 669
K
Sbjct: 566 KGK 568
Score = 43 (20.2 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 404 AYNANGTVFVTGSSDTFARVWSACKSSVEDSE 435
+++ V V+G +D RVW + + S+
Sbjct: 495 SWSVESNVLVSGGADGTVRVWDVMGPAHDPSQ 526
>TAIR|locus:2123929 [details] [associations]
symbol:VIP3 "AT4G29830" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009910 "negative regulation
of flower development" evidence=IGI;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IPI] [GO:0010452 "histone H3-K36 methylation"
evidence=IMP] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL050352 EMBL:AL161575
GO:GO:0009910 GO:GO:0051568 HSSP:P16649 GO:GO:0080008 GO:GO:0010452
UniGene:At.23602 UniGene:At.72983 HOGENOM:HOG000036765 KO:K12602
OMA:PPSEVWG EMBL:BT008333 IPI:IPI00518529 PIR:T08544
RefSeq:NP_194712.1 SMR:Q9SZQ5 IntAct:Q9SZQ5 STRING:Q9SZQ5
EnsemblPlants:AT4G29830.1 GeneID:829105 KEGG:ath:AT4G29830
TAIR:At4g29830 InParanoid:Q9SZQ5 ProtClustDB:CLSN2685393
Genevestigator:Q9SZQ5 Uniprot:Q9SZQ5
Length = 321
Score = 136 (52.9 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 42/160 (26%), Positives = 73/160 (45%)
Query: 232 KMQNIKKLRG-HRDAVYCAIF-----DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
K+ +K + H D+V+ A + DR ++TGS D VK+W + + + GH
Sbjct: 2 KLAGLKSIENAHEDSVWAATWVPATEDRPA-LLLTGSLDETVKLWRPDELDLVRTNTGHS 60
Query: 286 GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQL 345
+ LA + + AS+S D +RV+ + I+VL V + F P+ + +
Sbjct: 61 LGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTIL--A 118
Query: 346 LSSSDDGTCRIWD-ARYSQYS----PRIYLPKPPDAITGK 380
++ + ++WD A + S PR PKP D + K
Sbjct: 119 VAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSK 158
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 36/133 (27%), Positives = 59/133 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
V + + + +L GH V +F R + +GSDD V + E L S GH +
Sbjct: 187 VDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWV 246
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA---IYQL 345
+ S + +A+ S+D +R+W L I + H V ++AF P +L
Sbjct: 247 LSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRL 306
Query: 346 LSSSDDGTCRIWD 358
S SDD + ++D
Sbjct: 307 ASVSDDKSVSLYD 319
Score = 101 (40.6 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 36/133 (27%), Positives = 54/133 (40%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDG 610
+ WS + + + MD ICV++ L+H L GH+ L P +PR+ S DG
Sbjct: 164 VAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDG 223
Query: 611 RTIVWDIWEGTPIRIYEIGRFKLV-DGKFSPDGTSIVL--SDDVGQIYLLNTGQGESQKD 667
+ D EG + G V SPDG +I SD +++ L
Sbjct: 224 HVNMHDA-EGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMS 282
Query: 668 AKYDQFFLGDYRP 680
DQ + +RP
Sbjct: 283 NHNDQVWSVAFRP 295
Score = 66 (28.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 548 VNMIVWS-LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSA 606
V +V+S +D R + + D + + +A +L+ S++GH+ S+VL V A++
Sbjct: 203 VRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHT--SWVLSVDASPDGGAIAT 260
Query: 607 GYDGRTI-VWDI 617
G RT+ +WD+
Sbjct: 261 GSSDRTVRLWDL 272
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 201 (75.8 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 45/126 (35%), Positives = 65/126 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C F + +V TGS DR V++W + C+ GH+G I L
Sbjct: 378 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 437
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R I L S S D T
Sbjct: 438 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 494
Query: 354 CRIWDA 359
R+WDA
Sbjct: 495 VRLWDA 500
Score = 190 (71.9 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 56/217 (25%), Positives = 91/217 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH VY A F ++++ S+D V++WS++T CL +GH + D S
Sbjct: 296 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 355
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
S +D V R+W P+ + GH V F P + + + S D T R
Sbjct: 356 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV---ATGSADRTVR 412
Query: 356 IWDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQI 400
+WD ++ + I+ L P+ A G+ L+ H
Sbjct: 413 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 472
Query: 401 LCCA--YNANGTVFVTGSSDTFARVWSACKSSVEDSE 435
C+ ++ +G + +GS D R+W A K+ ED E
Sbjct: 473 TVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDLE 508
Score = 117 (46.2 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 262 KKLRSVKQAADLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 314
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 315 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 371
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 372 WATDH--YQPLRIF 383
Score = 102 (41.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + ++ +V D + +W+ ++G+ V TGH + L P N R +
Sbjct: 390 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 448
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRFKLVDG-KFSPDG 642
DGR ++WDI G + + E+ G V +FS DG
Sbjct: 449 TDGRVLLWDIGHG--LMVGELKGHTDTVCSLRFSRDG 483
Score = 78 (32.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + +A G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 385 GHLADVNCTRFHPNSNYVA--TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 442
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 443 FLATGATDGRVLLWDIGHG 461
Score = 67 (28.6 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + RF+ D R+ +W+ G +V L GH+ + L + I S
Sbjct: 432 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 490
Query: 608 YDGRTIVWD 616
D +WD
Sbjct: 491 MDNTVRLWD 499
Score = 41 (19.5 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGP 64
P K S V++ A L D ++ V+E +D + L I + SGP
Sbjct: 261 PKKLRS-VKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGP 305
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 157 (60.3 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 37/124 (29%), Positives = 62/124 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q+I ++ GH V +F R++ + S D+ VK+W T LAS RGH G + +A
Sbjct: 351 QSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAW 410
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S+++ L+ S S D ++V+ L L GH V + +SP + + +S D
Sbjct: 411 SADSRLLVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKV---VSGGKDKV 467
Query: 354 CRIW 357
++W
Sbjct: 468 LKLW 471
Score = 156 (60.0 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH + V A F GR + +GS D+ ++IW +E L +C+ H+ + +A S + T +
Sbjct: 103 GHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKI 162
Query: 301 ASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP-RPSAIYQLLSS-SDDGTCRIW 357
ASA + I +W G I L+ H +T++A+ P +LL+S DG IW
Sbjct: 163 ASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIW 222
Query: 358 D 358
D
Sbjct: 223 D 223
Score = 128 (50.1 bits), Expect = 0.00026, P = 0.00026
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWS-METAFCLASCRG 283
KP T V++ Q + + R + A+ A G +++GSDD + +W+ ET + G
Sbjct: 305 KPDT-VEECQKVAQTR-YEAALEIA----GGERLVSGSDDFTLFMWNPKETKQSINRMTG 358
Query: 284 HEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
H + + S + +ASAS D +++W G ++ LRGH G V +A+S S +
Sbjct: 359 HMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSA-DSRL- 416
Query: 344 QLLSSSDDGTCRIWDAR 360
L+S S D T ++++ +
Sbjct: 417 -LVSGSADSTLKVFELK 432
Score = 102 (41.0 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 26/84 (30%), Positives = 40/84 (47%)
Query: 277 CLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFS 336
C AS GH + S + +AS S D +R+W + LP+ + H V IA+S
Sbjct: 97 CSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWS 156
Query: 337 PRPSAIYQLLSSSDDGTCRIWDAR 360
P + I S+ +G IW+A+
Sbjct: 157 PDATKI---ASACKNGEICIWNAK 177
Score = 98 (39.6 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 33/126 (26%), Positives = 56/126 (44%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLA-SCRGHEGDITDLA---VSS 295
+ H+ V C + + + + + IW+ +T + + + H+ IT LA +
Sbjct: 144 KSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHK 203
Query: 296 NNT--LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+ T L+AS D I +W G + L GHT +VT + + IY S S D T
Sbjct: 204 DPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASVTCLRWGGE-GLIY---SGSQDRT 259
Query: 354 CRIWDA 359
++W A
Sbjct: 260 VKMWRA 265
Score = 86 (35.3 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN +V+S D R++ +A D + +W G + SL GH Y + + R+ +S
Sbjct: 363 VNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQV-AWSADSRLLVSGS 421
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRF-KLVDGKFSPDGTSIV 646
D V+++ T Y++ G ++ +SP+GT +V
Sbjct: 422 ADSTLKVFEL--KTKSLYYDLPGHGDEVFTVDWSPEGTKVV 460
Score = 52 (23.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V + W + + + D + +W A DG + ++TGH+
Sbjct: 240 VTCLRWGGEG-LIYSGSQDRTVKMWRADDGVMCRNMTGHA 278
Score = 41 (19.5 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 489 IVTCSRDGSAIIW 501
+ +C +DG+ IW
Sbjct: 210 LASCGKDGNIFIW 222
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 171 (65.3 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 40/129 (31%), Positives = 61/129 (47%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DL 291
+ + ++ H D V C F ++ T S D+ VKIW T + + H +
Sbjct: 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHF 707
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
SN+ L+A+ SND +++W L + + GHT +VT FSP L S S D
Sbjct: 708 TNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDEL---LASCSAD 764
Query: 352 GTCRIWDAR 360
GT ++WD R
Sbjct: 765 GTLKLWDVR 773
Score = 149 (57.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 33/128 (25%), Positives = 67/128 (52%)
Query: 233 MQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
++N+ +L R H DAVY A F + G+ + + D+ ++++ ET L + HE ++
Sbjct: 603 IKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLC 662
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
A SS+++ +A+ S D +++W G + H+ V F+ + + + L + S+
Sbjct: 663 CAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLL-LATGSN 721
Query: 351 DGTCRIWD 358
D ++WD
Sbjct: 722 DSFLKLWD 729
Score = 132 (51.5 bits), Expect = 0.00035, P = 0.00035
Identities = 39/126 (30%), Positives = 60/126 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+ H++ V R R +++ S D VK+W++ T H+G + A+SS+ T
Sbjct: 1040 LQAHQETVKDFRLLRDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDAT 1098
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD-GTCRIW 357
+S S D ++W P+ L+GH V AFS I LL++ DD G RIW
Sbjct: 1099 KFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSL--DGI--LLATGDDNGEIRIW 1154
Query: 358 DARYSQ 363
+ Q
Sbjct: 1155 NVSDGQ 1160
Score = 116 (45.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 32/133 (24%), Positives = 60/133 (45%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + G +I + ++++ + + T+ L GH I S + L A
Sbjct: 801 VKCCSWSADGDRIIVAAKNKVLLL-DIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIAL 859
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQY 364
+ + + +W + + ++ RGH V + FSP S+ L++SDD T R+W+ R
Sbjct: 860 SQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSF---LTASDDQTIRVWETRKVCK 916
Query: 365 SPRIYLPKPPDAI 377
+ I L + D +
Sbjct: 917 NSAIVLKQEIDVV 929
Score = 114 (45.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 32/117 (27%), Positives = 58/117 (49%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH+ AV F G+ +I+ S+D ++++W+ +T + + H+ + D + ++ L+
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF-LQAHQETVKDFRLLRDSRLL 1059
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H G V + A S S + S+S D T +IW
Sbjct: 1060 -SWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAIS---SDATKFSSTSADKTAKIW 1112
Score = 91 (37.1 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 44/188 (23%), Positives = 74/188 (39%)
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
E ++ +S + VA + I++ LP+ S GH AV I F+
Sbjct: 961 EAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKT--- 1017
Query: 345 LLSSSDDGTCRIWDARYSQYS-PRIYLPKPPD------------AITGKXXXXXXXXXXX 391
L+SSS+D ++W+ + +Y + + D + G
Sbjct: 1018 LISSSEDSVIQVWNWQTEEYVFLQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRI 1077
Query: 392 XXXLQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN 449
HQ +L CA +++ T F + S+D A++WS + P+HEL GH +
Sbjct: 1078 ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSF------ELPSPLHEL---KGHNS 1128
Query: 450 DVNYVQFS 457
V FS
Sbjct: 1129 CVRCSAFS 1136
Score = 82 (33.9 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 59/283 (20%), Positives = 102/283 (36%)
Query: 405 YNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCA- 460
++ +G+ F+T S D RVW CK+S +Q E+DV+ EN++ +
Sbjct: 890 FSPDGSSFLTASDDQTIRVWETRKVCKNSAIVLKQ---EIDVVF-QENEMMVLAVDNIRG 945
Query: 461 ---VASRSAMSDAFKEENVPKFKNSWFC---HDNIVTCSRDGSAI--IWIPRSRRSHGKV 512
+A ++ D E V S C H V + AI I +P +R +
Sbjct: 946 LQLIAGKTGQIDYLPEAQV-----SCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGI 1000
Query: 513 GRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXVNMIVWS----------LDNRFVLA 562
G H++ + + + L + +L+
Sbjct: 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQETVKDFRLLRDSRLLS 1060
Query: 563 AIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTP 622
D + VWN + G + T H + + + + S D +W +E P
Sbjct: 1061 WSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFS-STSADKTAKIWS-FE-LP 1117
Query: 623 IRIYEI-GRFKLVD-GKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
++E+ G V FS DG + DD G+I + N G+
Sbjct: 1118 SPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160
Score = 81 (33.6 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVH-----SLTGHSAS--SYVLDVHPFNP 600
V +SLD + + I +WN DG L+H S+ +A+ +V DV F+P
Sbjct: 1130 VRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVC-FSP 1188
Query: 601 --RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
++ +SAG G W++ G + + L SPD + V D++G +Y+L
Sbjct: 1189 DRKMLVSAG--GYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYIL 1245
Score = 74 (31.1 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 18/66 (27%), Positives = 30/66 (45%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
RGH V+ +F G +T SDD+ +++W C S + +I D+ N +
Sbjct: 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKV-CKNSAIVLKQEI-DVVFQENEMM 936
Query: 300 VASASN 305
V + N
Sbjct: 937 VLAVDN 942
Score = 54 (24.1 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVN 452
L+ H + C A++ +G + TG + R+W+ + PI + + H V
Sbjct: 1123 LKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVT 1182
Query: 453 YVQFS 457
V FS
Sbjct: 1183 DVCFS 1187
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 162 (62.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 36/128 (28%), Positives = 69/128 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GH+D + CA F+ + + + TGS D+ + IW++ GH IT + + +
Sbjct: 12 RHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPS 71
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+LVAS+S D +R+W +V + HT +V ++ FS R +L+++SDD + ++
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFS-RDGQ--RLVTASDDKSVKV 128
Query: 357 WDARYSQY 364
W ++
Sbjct: 129 WGVERKKF 136
Score = 159 (61.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V++ + + L H + V CA F GR + + DDR V++W + C+ + G T
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSAT 190
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ +S+ T +AS+ D I++W + I + H V +F PS Y L+S S
Sbjct: 191 FVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSF--HPSGNY-LISGS 247
Query: 350 DDGTCRIWD 358
D T +I D
Sbjct: 248 SDSTIKILD 256
Score = 157 (60.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 48/202 (23%), Positives = 85/202 (42%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+ H +V F R G+ ++T SDD+ VK+W +E L S H + S + L
Sbjct: 99 KAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRL 158
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+AS +D +R+W I++ + G+ T + F+ + I SS D T +IWD
Sbjct: 159 IASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCI---ASSGADNTIKIWDI 215
Query: 360 R-------YSQYSPRI----YLPKPPDAITGKXXXXXXXXXXXXX----XLQSHQ--ILC 402
R Y ++ + + P I+G L H+ +L
Sbjct: 216 RTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLT 275
Query: 403 CAYNANGTVFVTGSSDTFARVW 424
++ +G +F +G +D+ +W
Sbjct: 276 VTFSRDGDLFASGGADSQVLMW 297
Score = 124 (48.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 34/123 (27%), Positives = 52/123 (42%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH D + F SG V + S D+ V++W+ + H + + S + +
Sbjct: 58 GHTDVITGVNFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRL 117
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+AS+D ++VW + + L HT V FSP I S DD T R+WD
Sbjct: 118 VTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLI---ASCGDDRTVRLWDTS 174
Query: 361 YSQ 363
Q
Sbjct: 175 SHQ 177
Score = 80 (33.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 24/110 (21%), Positives = 47/110 (42%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R + + D + +W+ ++ T + S+ +D + IA S+G D
Sbjct: 152 FSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIA-SSGADNTI 210
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+WDI I+ Y++ + F P G ++ I +L+ +G
Sbjct: 211 KIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEG 260
Score = 58 (25.5 bits), Expect = 8.0e-09, Sum P(2) = 8.0e-09
Identities = 14/68 (20%), Positives = 30/68 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + ++++ D I + + ++G L+++L GH + A S G
Sbjct: 231 VNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA-SGG 289
Query: 608 YDGRTIVW 615
D + ++W
Sbjct: 290 ADSQVLMW 297
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 197 (74.4 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G +S GHTG V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 168 (64.2 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ RGH AV C F G+++ + +DD VK+W + ++ GH G + + N
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
L+AS S+D IR W L +S + G G V ++ F+P +Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Score = 158 (60.7 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 153 (58.9 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 85 (35.0 bits), Expect = 3.0e-10, Sum P(3) = 3.0e-10
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP N + +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LASG 207
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
RTI WD+ + + E + F+PDG
Sbjct: 208 SSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Score = 57 (25.1 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 176
Query: 618 WEG 620
G
Sbjct: 177 TAG 179
Score = 47 (21.6 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 1331 MKIISREPIAANCNFKSKNGHDLVGT-SKTVGNSSMEAHDEFFPEEWIPTST-VKSRPRS 1388
++++ R P+ A+ + T ++ +G ++A D F P IP +
Sbjct: 433 LEVLPRPPVVASTPAPKAEPAIIPATRNEPIG---LKASD-FLPAVKIPQQAELVDEDAM 488
Query: 1389 TRNRRGDHDGHPCLLSGRKSNFPVRKLSWLM 1419
++ R+G HD +L+ R N + W M
Sbjct: 489 SQIRKG-HDTMCVVLTSRHKNLDTVRAVWTM 518
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 181 (68.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 196 (74.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 43/127 (33%), Positives = 61/127 (48%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+N + L+GH V FD S + TGS DR +KIW + T + GH G + LAV
Sbjct: 161 KNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S+ +T + SA +D ++ W L I GH V +A P + L+ D
Sbjct: 221 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVV---LTGGRDSV 277
Query: 354 CRIWDAR 360
CR+WD R
Sbjct: 278 CRVWDIR 284
Score = 43 (20.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-NPRIAMSA 606
V+ D I W+ G + ++T H + + +HP N ++ SA
Sbjct: 310 VITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASA 357
Score = 39 (18.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELD 442
I Y+ G+ VT D ++W K ED+ H L+
Sbjct: 431 IYAACYDQTGSRLVTCEGDKTIKMW---KED-EDATPETHPLN 469
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 178 (67.7 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 36/122 (29%), Positives = 66/122 (54%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD++G+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D +++W + G + GH V + RP+ LL+S S+D T R
Sbjct: 204 GDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV----RPNQDGTLLASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 154 (59.3 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W E + +GH + D++
Sbjct: 104 LSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTMKMWE 220
Score = 141 (54.7 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 28/108 (25%), Positives = 56/108 (51%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + V S ++D +R+W
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F ++ Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLSAHEHFVTSLDF--HKASPY-VVTGSVDQTVKVWECR 410
Score = 140 (54.3 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W + T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
+ + + TL+AS SND +RVW + + LR H V I+++P
Sbjct: 240 VRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAP 286
Score = 59 (25.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTIVWD 616
F+L+ D I +W+ G + +L GH ++V V HP R +S D +WD
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHD--NWVRGVLFHP-GGRFVVSCADDKTLRIWD 366
Score = 59 (25.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ RFV++ D + +W+ + + +L+ H LD H +P + ++
Sbjct: 341 VRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 49 (22.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
+++A D + +W G V + TGH +V V P +++ + +T+ VW
Sbjct: 207 IVSASRDKTMKMWEVATGYCVKTFTGHR--EWVRMVRPNQDGTLLASCSNDQTVRVW 261
Score = 40 (19.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKASPYVVTGSVDQTVKVWE-CR 410
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 165 (63.1 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 42/154 (27%), Positives = 69/154 (44%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
KP + +K L + AV F+ G + +T D+ +K+W+ L + GH
Sbjct: 7 KPRAPELPQKRMKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
++ D A S +N+ + S D + +W + G + RGH G V + F+ + I
Sbjct: 67 GYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVI-- 124
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT 378
LS S D + R WD R + P L + D I+
Sbjct: 125 -LSGSIDSSVRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 116 (45.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 250 IFDRSGRF----VITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASN 305
+ D +G F + +G D+ V +W + T + RGH G + + + T++ S S
Sbjct: 70 VLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSI 129
Query: 306 DFVIRVW----RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARY 361
D +R W R P+ P+ L ++++ S +++L+ S DG R +D R
Sbjct: 130 DSSVRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEILAGSVDGRVRRYDLRM 182
Query: 362 SQYSPRIYLPKP 373
Q S Y+ P
Sbjct: 183 GQVSSD-YVGSP 193
Score = 67 (28.6 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 18/70 (25%), Positives = 32/70 (45%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMSAGYDG 610
+S D + L + +D + + + G L+ GH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHV-VSCSEDG 257
Query: 611 RTIVWDIWEG 620
+ WD+ EG
Sbjct: 258 KVFFWDLVEG 267
Score = 50 (22.7 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V++ D ++ W+ V+G+L +L S L HP P + + G
Sbjct: 250 VVSCSEDGKVFFWDLVEGALALALPVGSNVVQSLAYHPTEPCLLTAMG 297
Score = 45 (20.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 488 NIVTCSRDGSAIIW 501
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 164 (62.8 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 42/154 (27%), Positives = 69/154 (44%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
KP + +K L + AV F+ G + +T D+ +K+W+ L + GH
Sbjct: 7 KPRAPELPRKQLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGH 66
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
++ D A S +N+ + S D + +W + G + RGH G V + F+ + I
Sbjct: 67 GYEVLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVI-- 124
Query: 345 LLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAIT 378
LS S D + R WD R + P L + D I+
Sbjct: 125 -LSGSIDSSVRCWDCRSRKPEPVQTLDEARDGIS 157
Score = 113 (44.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 33/132 (25%), Positives = 60/132 (45%)
Query: 250 IFDRSGRF----VITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASN 305
+ D +G F + +G D+ V +W + T + RGH G + + + T++ S S
Sbjct: 70 VLDAAGSFDNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSI 129
Query: 306 DFVIRVW----RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARY 361
D +R W R P+ P+ L ++++ S +++L+ S DG R +D R
Sbjct: 130 DSSVRCWDCRSRKPE--PVQTLDEARDGISSVKVSD-----HEILAGSVDGRVRRYDLRM 182
Query: 362 SQYSPRIYLPKP 373
Q + Y+ P
Sbjct: 183 GQVTSD-YVGSP 193
Score = 68 (29.0 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD--VHPFNPRIAMSAGYDG 610
+S D + L + +D + + + G L+ GH Y LD + + + +S DG
Sbjct: 199 FSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHV-VSCSEDG 257
Query: 611 RTIVWDIWEGT 621
+ WD+ EG+
Sbjct: 258 KVFFWDLVEGS 268
Score = 54 (24.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V++ D ++ W+ V+GSL +L S L HP +P + + G
Sbjct: 250 VVSCSEDGKVFFWDLVEGSLALALPVGSNVVQSLAYHPADPCLLTAMG 297
Score = 45 (20.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 488 NIVTCSRDGSAIIW 501
++V+CS DG W
Sbjct: 249 HVVSCSEDGKVFFW 262
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 169 (64.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 47/157 (29%), Positives = 75/157 (47%)
Query: 225 KPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH 284
KP ++ + + + LRGH V F + +G D VK+W+ T + + GH
Sbjct: 160 KPESVNYRQKFL--LRGHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGH 217
Query: 285 EGDITDLAVSSNNTLVASASNDFVIRVWRLPDGL--PISVLRGHTGAVTAIAFSPRPSAI 342
I+ ++ S + +AS S+D IR+W + G P + GH V AIAFSP+ +
Sbjct: 218 LAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFI-GHHNYVYAIAFSPKGN-- 274
Query: 343 YQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITG 379
L+S S D +WD R ++ LP D ++G
Sbjct: 275 -MLVSGSYDEAVFLWDVRSARVMKS--LPAHSDPVSG 308
Score = 150 (57.9 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 35/119 (29%), Positives = 58/119 (48%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH + VY F G +++GS D V +W + +A + S H ++ + V + TL+
Sbjct: 259 GHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLI 318
Query: 301 ASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS + D ++R+W G + L V+++ FSP Y L + DD R+WD
Sbjct: 319 ASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKFSPNGK--YVLAWTLDD-CVRLWD 374
Score = 72 (30.4 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 23/81 (28%), Positives = 40/81 (49%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLD----VH----PFN 599
V+ + +S + ++VLA +D + +W+ V+G + + GHS Y L V+ P
Sbjct: 349 VSSVKFSPNGKYVLAWTLDDCVRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGR 408
Query: 600 -P--RIAMSAGYDGRTIVWDI 617
P A+S DG + WD+
Sbjct: 409 TPGYAFAVSGSEDGAILCWDV 429
Score = 53 (23.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 14/59 (23%), Positives = 23/59 (38%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP-RIAMSAGYDGRTIVWD 616
F ++ D I W+ V ++ + H +D R +S G DG VW+
Sbjct: 414 FAVSGSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWE 472
Score = 37 (18.1 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 489 IVTCSRDGSAIIW 501
+V+C DG+ +W
Sbjct: 459 MVSCGLDGTVRVW 471
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 180 (68.4 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 159 (61.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 151 (58.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 175 (66.7 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ETA + GH GD+ L++S +
Sbjct: 137 RELPGHTGYLSCCRFLDDSQ-IVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
S + D ++W + DG+ GH + A++F P Y + SDD TCR+
Sbjct: 196 MRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNG---YAFATGSDDATCRL 252
Query: 357 WDARYSQ 363
+D R Q
Sbjct: 253 FDLRADQ 259
Score = 121 (47.7 bits), Expect = 0.00084, P = 0.00084
Identities = 34/132 (25%), Positives = 56/132 (42%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ Q GH V R ++G+ D K+W + C S GH DI
Sbjct: 171 IETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDIN 230
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTG---AVTAIAFSPRPSAIYQLL 346
++ N A+ S+D R++ L + +L H +T++AFS + + LL
Sbjct: 231 AVSFFPNGYAFATGSDDATCRLFDLRADQEL-LLYSHDNIICGITSVAFS-KSGRL--LL 286
Query: 347 SSSDDGTCRIWD 358
+ DD C +WD
Sbjct: 287 AGYDDFNCNVWD 298
Score = 109 (43.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 34/136 (25%), Positives = 61/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDS----QIVT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD +Q
Sbjct: 160 SSGDTTCALWDIETAQ 175
Score = 57 (25.1 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+ + G L GH L V +A +
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLRIWN 340
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 21/96 (21%), Positives = 41/96 (42%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
S ++ + + + FV+G+ D +++W S +GH +D+N V F
Sbjct: 184 SGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQS---------FTGHVSDINAVSF 234
Query: 457 --SGCAVASRSAMSDAFKEENVPKFKNSWFCHDNIV 490
+G A A+ S + + + + HDNI+
Sbjct: 235 FPNGYAFATGSDDATCRLFDLRADQELLLYSHDNII 270
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 182 (69.1 bits), Expect = 6.9e-10, P = 6.9e-10
Identities = 39/123 (31%), Positives = 63/123 (51%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH+ ++ F G ++ +GS D +K+W + C+ +GH + LA S
Sbjct: 98 LRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSP 157
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ +ASAS+D +++W L G I+ HT AV + F P Y L S S D T +
Sbjct: 158 DGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE---YLLASGSADRTVK 214
Query: 356 IWD 358
+WD
Sbjct: 215 LWD 217
Score = 178 (67.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 45/129 (34%), Positives = 64/129 (49%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V K I L GH AV C F+ S V+ GS +++W +E A L + GH+ I+
Sbjct: 50 VSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASIS 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L +AS S D I++W + + +GHT AV +AFSP L S+S
Sbjct: 110 SLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGK---WLASAS 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDSTVKLWD 175
Score = 158 (60.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 35/128 (27%), Positives = 60/128 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V++ + + +GH AV C F G+++ + SDD VK+W + + H +
Sbjct: 134 VRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVN 193
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ N L+AS S D +++W L I G TG V ++ F+P S +Y S
Sbjct: 194 VVQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLY----SG 249
Query: 350 DDGTCRIW 357
+ T R++
Sbjct: 250 SENTLRVY 257
Score = 144 (55.7 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 34/126 (26%), Positives = 60/126 (47%)
Query: 236 IKKLRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + +S GR + TG +D V IW++ C+ S GH + + +
Sbjct: 13 LQEIVAHSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
S+ V + S +R+W L + L GH +++++ F P Y L S S D
Sbjct: 73 SSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGE--Y-LASGSVDSNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDVR 135
Score = 101 (40.6 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
Identities = 29/111 (26%), Positives = 58/111 (52%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ + G ++ T H+++ V+ HP N + S
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHP-NEYLLASGS 208
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSIVL-SDDVGQIY 655
D RT+ +WD+ + I E G +V F+PDG+ + S++ ++Y
Sbjct: 209 AD-RTVKLWDLEKFNMIGSSE-GETGVVRSVLFNPDGSCLYSGSENTLRVY 257
Score = 52 (23.4 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 13/62 (20%), Positives = 28/62 (45%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSS-VEDSEQPIHELDVLSGHENDVNYVQFSG 458
+ C A++ +G + S D+ ++W + + ++V+ H N+ Y+ SG
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPNE--YLLASG 207
Query: 459 CA 460
A
Sbjct: 208 SA 209
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 190 (71.9 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 42/127 (33%), Positives = 61/127 (48%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+N + ++GH V FD S + TGS DR +KIW + T + GH + LAV
Sbjct: 167 KNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S+ +T + SA +D ++ W L I GH V +A P + LL+ D
Sbjct: 227 SNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHP---TLDVLLTGGRDSV 283
Query: 354 CRIWDAR 360
CR+WD R
Sbjct: 284 CRVWDIR 290
Score = 145 (56.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH + V ++ + DD+ VK W +E + S GH + LA+
Sbjct: 214 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD 273
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
++ + D V RVW + + I L GH V ++ F+ RP+ Q+++ S D T + WD
Sbjct: 274 VLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSV-FT-RPTDP-QVVTGSHDTTIKFWD 330
Query: 359 ARYSQ 363
RY +
Sbjct: 331 LRYGK 335
Score = 138 (53.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 31/118 (26%), Positives = 54/118 (45%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I+ GH VYC + ++TG D + ++W + T + + GH+ + +
Sbjct: 253 IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRP 312
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+ V + S+D I+ W L G +S L H +V A+ P+ +A S+S D T
Sbjct: 313 TDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAF---ASASADNT 367
Score = 48 (22.0 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 15/50 (30%), Positives = 21/50 (42%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD 609
V+ D I W+ G + +LT H S + +HP A SA D
Sbjct: 317 VVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFA-SASAD 365
Score = 40 (19.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH 439
I Y+ G+ VT +D ++W +++ ++ PI+
Sbjct: 438 IYAACYDNTGSRLVTCEADKTIKMWKEDENATPETH-PIN 476
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 164 (62.8 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 39/129 (30%), Positives = 64/129 (49%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + +++ H D V C F RF+ T S D+ VKIW+ T + H +
Sbjct: 656 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHF 715
Query: 294 SSNN--TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
++N+ L+A+AS+D +++W L + + GHT +V FSP L S S D
Sbjct: 716 TNNSHYLLLATASSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKL---LASCSAD 772
Query: 352 GTCRIWDAR 360
GT ++WD +
Sbjct: 773 GTLKLWDVK 781
Score = 140 (54.3 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 34/130 (26%), Positives = 65/130 (50%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ ++N+ +L R H DAVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 609 KNIKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDEV 668
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A S+++ +A+ S D +++W G + V H+ V F+ S L ++
Sbjct: 669 LCCAFSTDDRFIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVNCCHFTNN-SHYLLLATA 727
Query: 349 SDDGTCRIWD 358
S D ++WD
Sbjct: 728 SSDCFLKLWD 737
Score = 130 (50.8 bits), Expect = 0.00057, P = 0.00057
Identities = 44/138 (31%), Positives = 65/138 (47%)
Query: 242 HRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
H+D V C I + +F T S D+ KIWS E L RGH+G + S ++TL+
Sbjct: 1093 HQDTVLSCDISPDATKFSST-SADKTAKIWSFELLSPLHELRGHKGCVRCSVFSVDSTLL 1151
Query: 301 ASASNDFVIRVWRLPDG------LPISVLRG---HTGAVTAIAFSPRPSAIYQLLSSSDD 351
A+ ++ IR+W + +G PI V G H G VT + FSP L+S+
Sbjct: 1152 ATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLCFSPDSK---MLVSAG-- 1206
Query: 352 GTCRIWDARYSQYSPRIY 369
G + W+ + S Y
Sbjct: 1207 GYLKWWNVVTGESSQTFY 1224
Score = 122 (48.0 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 34/133 (25%), Positives = 59/133 (44%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + G ++ + +++ ++ + T LA GH I S N L A
Sbjct: 809 VKCCSWSADGTRIMVAAKNKIF-LFDIHTGGLLAEIHTGHHSTIQYCDFSPQNHLAVVAL 867
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQY 364
+ + +W + L ++ RGH V + FSP S+ L+SSDD T R+W+ +
Sbjct: 868 SQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSF---LTSSDDQTIRLWETKKVCK 924
Query: 365 SPRIYLPKPPDAI 377
+ I L + D +
Sbjct: 925 NSAIVLKQEIDVV 937
Score = 71 (30.1 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 22/95 (23%), Positives = 39/95 (41%)
Query: 571 VWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGR 630
+W+ + G + H + D+ P + + S D +W +P+ +E+
Sbjct: 1078 IWSIITGRIEKDFVCHQDTVLSCDISPDATKFS-STSADKTAKIWSFELLSPL--HELRG 1134
Query: 631 FK--LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
K + FS D T + DD G+I + N GE
Sbjct: 1135 HKGCVRCSVFSVDSTLLATGDDNGEIRIWNVSNGE 1169
Score = 66 (28.3 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDV 451
C ++ +G+ F+T S D R+W CK+S +Q E+DV+ EN+V
Sbjct: 895 CVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSAIVLKQ---EIDVVF-QENEV 943
Score = 65 (27.9 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 28/117 (23%), Positives = 50/117 (42%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHS----LTGHSASSY---VLDVHPFNP 600
V V+S+D+ + + I +WN +G L+H L A+++ V D+ F+P
Sbjct: 1139 VRCSVFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPILVEEGAATHGGWVTDLC-FSP 1197
Query: 601 RIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
M G W++ G + + L S D + V D++G +Y+L
Sbjct: 1198 DSKMLVSAGGYLKWWNVVTGESSQTFYTNGTCLKKIHVSSDFKTYVTVDNLGILYIL 1254
Score = 51 (23.0 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 27/112 (24%), Positives = 47/112 (41%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V I ++ D + ++++ D I VWN V L H + V D +S
Sbjct: 1014 VRHIQFTDDGKTLISSSDDSSIQVWNWQSEEYVF-LQAHQET--VKDFKLLKNSKLLSWS 1070
Query: 608 YDGRTI--VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
+DG T+ +W I G + + + ++ SPD T S +D +I+
Sbjct: 1071 FDG-TVKKIWSIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIW 1121
Score = 49 (22.3 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
L+ H+ + C ++ + T+ TG + R+W+
Sbjct: 1132 LRGHKGCVRCSVFSVDSTLLATGDDNGEIRIWN 1164
Score = 48 (22.0 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 607 GYDGRTIVWDIWEGTPIRIYE--IGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G DG + ++ RI++ IG K V +F+ DG +++ S D I + N Q E
Sbjct: 988 GEDGAVEILELLNN---RIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWNW-QSE 1043
Query: 664 SQKDAKYDQFFLGDYRPLIRDS 685
+ Q + D++ L+++S
Sbjct: 1044 EYVFLQAHQETVKDFK-LLKNS 1064
>ASPGD|ASPL0000042645 [details] [associations]
symbol:AN1468 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR027106 PANTHER:PTHR19846
EMBL:AACD01000022 InterPro:IPR014906 Pfam:PF08799
HOGENOM:HOG000157615 KO:K12662 OMA:CKIWDLR OrthoDB:EOG4V1B90
RefSeq:XP_659072.1 ProteinModelPortal:Q5BDB2 SMR:Q5BDB2
STRING:Q5BDB2 EnsemblFungi:CADANIAT00008085 GeneID:2875152
KEGG:ani:AN1468.2 Uniprot:Q5BDB2
Length = 521
Score = 168 (64.2 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 39/131 (29%), Positives = 65/131 (49%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K Q + L GH V F SG+++ + S D ++W +ET L GH ++
Sbjct: 279 LDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTAELQLQEGHSREVY 338
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+A +++ +L+AS D + RVW L G + +L GH + + + Y++LS S
Sbjct: 339 TVAFNNDGSLLASGGLDSIGRVWDLRTGRTVMILEGHIREIFGLDWGVDG---YRVLSGS 395
Query: 350 DDGTCRIWDAR 360
DG + WD R
Sbjct: 396 GDGWVKCWDLR 406
Score = 114 (45.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 259 ITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGL 318
++G + V +WS++ LA+ GH G + + +ASAS D R+W +
Sbjct: 266 VSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEFHPSGKYIASASYDTTWRLWDVETTA 325
Query: 319 PISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + GH+ V +AF+ S L S D R+WD R
Sbjct: 326 ELQLQEGHSREVYTVAFNNDGSL---LASGGLDSIGRVWDLR 364
Score = 94 (38.1 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 35/132 (26%), Positives = 59/132 (44%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
++ G R C F G+ + TG+ +++ + S +GH + L+
Sbjct: 193 QIAGDRPVSICR-FAPDGQTIATGNWGGGIRLLGVPNLEEKLSVKGHTDRVGGLSWFPGA 251
Query: 298 TL----VASASNDFV-------IRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
TL V+ ++ +FV + +W L P++ L GH+G V F PS Y +
Sbjct: 252 TLPESNVSESAVNFVSGGGEGNVCLWSLDKDQPLATLEGHSGRVCRTEF--HPSGKY-IA 308
Query: 347 SSSDDGTCRIWD 358
S+S D T R+WD
Sbjct: 309 SASYDTTWRLWD 320
Score = 72 (30.4 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
F +++ D + +++A D SL+ +L+GHS + D+ N + S G+D RT+ +W I
Sbjct: 463 FFVSSGFDKNVNIFSADDWSLIKTLSGHSGNVLSADISN-NAQWIASCGHD-RTVKLWGI 520
Score = 58 (25.5 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVW 424
S ++ A+N +G++ +G D+ RVW
Sbjct: 334 SREVYTVAFNNDGSLLASGGLDSIGRVW 361
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 205 (77.2 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 45/126 (35%), Positives = 66/126 (52%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C F + ++ TGS DR V++W + C+ GH+G I LA
Sbjct: 598 QPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAF 657
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT + A+ FS R I L S S D T
Sbjct: 658 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFS-RDGEI--LASGSMDNT 714
Query: 354 CRIWDA 359
R+WDA
Sbjct: 715 VRLWDA 720
Score = 190 (71.9 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 60/231 (25%), Positives = 95/231 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH VY F ++++ S+D V++WS++T CL +GH + D S
Sbjct: 516 LKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 575
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
S +D V R+W P+ + GH VT F P + I + S D T R
Sbjct: 576 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYI---ATGSADRTVR 632
Query: 356 IWDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQ- 399
+WD ++ + I+ L P+ A G+ L+ H
Sbjct: 633 LWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 692
Query: 400 -ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN 449
I ++ +G + +GS D R+W A K+ ED E + +GH N
Sbjct: 693 TIYALRFSRDGEILASGSMDNTVRLWDAVKA-FEDLETD--DFTTATGHIN 740
Score = 114 (45.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 39/134 (29%), Positives = 57/134 (42%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 482 KKLRSVKAAADLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGTSFSPD 534
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 535 RNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 591
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 592 WATDH--YQPLRIF 603
Score = 99 (39.9 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 35/108 (32%), Positives = 53/108 (49%)
Query: 250 IFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVI 309
I D S ++ G D V++WS+ T L S + DL+ L+ S+D +
Sbjct: 458 ITDDSS-MIVGGFADSTVRVWSV-TPKKLRSVKA----AADLS------LIDKESDDVLE 505
Query: 310 RVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
R+ + +L GH+G V +FSP + Y LLS S+DGT R+W
Sbjct: 506 RIMDEKTASELKILYGHSGPVYGTSFSPDRN--Y-LLSCSEDGTVRLW 550
Score = 97 (39.2 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
++ ++ D + +W+ ++G+ V TGH + L P N R + DGR ++W
Sbjct: 618 NSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSP-NGRFLATGATDGRVLLW 676
Query: 616 DIWEGTPIRIYEI-GRFKLVDG-KFSPDG 642
DI G + + E+ G + +FS DG
Sbjct: 677 DIGHG--LMVGELKGHTDTIYALRFSRDG 703
Score = 79 (32.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 23/79 (29%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + IA G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 605 GHLADVTCTRFHPNSNYIA--TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGR 662
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 663 FLATGATDGRVLLWDIGHG 681
Score = 78 (32.5 bits), Expect = 7.5e-05, Sum P(3) = 7.5e-05
Identities = 18/69 (26%), Positives = 32/69 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + RF+ D R+ +W+ G +V L GH+ + Y L + I S
Sbjct: 652 IHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSR-DGEILASGS 710
Query: 608 YDGRTIVWD 616
D +WD
Sbjct: 711 MDNTVRLWD 719
Score = 59 (25.8 bits), Expect = 9.9e-07, Sum P(3) = 9.9e-07
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
++ G FV+G D AR+W+ D QP+ + +GH DV +F
Sbjct: 573 FSPYGYYFVSGGHDRVARLWAT------DHYQPLR---IFAGHLADVTCTRF 615
Score = 39 (18.8 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 16/50 (32%), Positives = 23/50 (46%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGPCQRT 68
P K S V+ A L D ++ V+E +D + L I + SGP T
Sbjct: 481 PKKLRS-VKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGT 529
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 178 (67.7 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 38/128 (29%), Positives = 70/128 (54%)
Query: 251 FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIR 310
++R+G++V+ ++R+V++W++++ C+ GH +I DL + ++T AS D I+
Sbjct: 22 YNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQ 81
Query: 311 VWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRIYL 370
VW + G L GH + I ++ S+I L S S D R+WD R + +SP L
Sbjct: 82 VWDVNTGKVDRRLGGHLAQINTIRYN-EDSSI--LASGSFDSKVRLWDCRSNSFSPIQVL 138
Query: 371 PKPPDAIT 378
D+++
Sbjct: 139 ADAKDSVS 146
Score = 48 (22.0 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 21/101 (20%), Positives = 40/101 (39%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR--IAMSAGYDGRTIVWD 616
F L + ++ I + + G ++ S G Y + FN I S DG+ +WD
Sbjct: 194 FSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVR-SSFNQSETIVFSGSEDGKVYLWD 252
Query: 617 IWEGTPIRIYEI-GRFKLVDGKFSPDGTSIVLSDDVGQIYL 656
+ T I + G + D P +++ G +++
Sbjct: 253 LENETQITSTSVVGTPIVTDISCHPTMDDFIIATVHGDLFI 293
>WB|WBGene00001680 [details] [associations]
symbol:gpb-2 species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0030163 "protein catabolic
process" evidence=IMP] [GO:0008277 "regulation of G-protein coupled
receptor protein signaling pathway" evidence=IGI] [GO:0046662
"regulation of oviposition" evidence=IMP] [GO:0040012 "regulation
of locomotion" evidence=IMP] [GO:0007631 "feeding behavior"
evidence=IMP] [GO:0007212 "dopamine receptor signaling pathway"
evidence=IMP] [GO:0032094 "response to food" evidence=IMP]
[GO:0007213 "G-protein coupled acetylcholine receptor signaling
pathway" evidence=IGI;IMP] [GO:0043051 "regulation of pharyngeal
pumping" evidence=IMP] [GO:0043025 "neuronal cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0040007 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007212
GO:GO:0007631 GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0040012 GO:GO:0046662
GO:GO:0043051 GO:GO:0032094 GO:GO:0007213 GO:GO:0030163
GO:GO:0008277 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 InterPro:IPR016346 PIRSF:PIRSF002394
EMBL:AF291847 EMBL:Z71263 PIR:T22478 RefSeq:NP_492072.1
UniGene:Cel.18555 ProteinModelPortal:Q20636 SMR:Q20636
STRING:Q20636 PaxDb:Q20636 EnsemblMetazoa:F52A8.2.1
EnsemblMetazoa:F52A8.2.2 GeneID:172483 KEGG:cel:CELE_F52A8.2
UCSC:F52A8.2 CTD:172483 WormBase:F52A8.2 InParanoid:Q20636
KO:K04539 OMA:ATDGLHE NextBio:875701 Uniprot:Q20636
Length = 356
Score = 168 (64.2 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 36/131 (27%), Positives = 63/131 (48%)
Query: 233 MQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA 292
+Q +++ H + C F RS ++TGS D IW +E+ + + GH GD+ +
Sbjct: 146 IQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAID 205
Query: 293 V---SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
V + NT +++ ++ + VW + G + GH + + F P A + S
Sbjct: 206 VPKCDTGNTFISAGADKHSL-VWDIRSGQCVQSFEGHEADINTVRFHPNGDAF---ATGS 261
Query: 350 DDGTCRIWDAR 360
DD TCR++D R
Sbjct: 262 DDATCRLFDLR 272
Score = 65 (27.9 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 19/68 (27%), Positives = 30/68 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + +SL R + A D R+ VW+++ + L GH L P + SA
Sbjct: 289 VNGVDFSLSGRILFAGYGDYRVGVWDSLKCARHSVLYGHENRISCLRTSPDGTAVC-SAS 347
Query: 608 YDGRTIVW 615
+D +W
Sbjct: 348 WDCTIRIW 355
Score = 43 (20.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWS 425
++I C + +GT + S D R+W+
Sbjct: 329 NRISCLRTSPDGTAVCSASWDCTIRIWA 356
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 162 (62.1 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 229 MVQKMQNIKKLRGHRDAVYC-AIFDRSGRFVITGSDDRLVKIWSM-ETAFCLASCRGHEG 286
M ++ +++ H V C +I ++ R ++TG DD V +WS+ +T ++ C GH
Sbjct: 1 MAKRGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLC-GHTS 59
Query: 287 DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+ +A +S LV + ++ VI++W L + + GH +A+ F P L
Sbjct: 60 PVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEF---LA 116
Query: 347 SSSDDGTCRIWDAR 360
S S D R+WD R
Sbjct: 117 SGSSDTNLRVWDTR 130
Score = 154 (59.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+++ + ++ GHR F G F+ +GS D +++W C+ + +GH I+
Sbjct: 87 LEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGIS 146
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ S + V S D V++VW L G + + H G + ++ F P + L + S
Sbjct: 147 TIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE---FLLATGS 203
Query: 350 DDGTCRIWD 358
D T + WD
Sbjct: 204 ADRTVKFWD 212
Score = 92 (37.4 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 30/112 (26%), Positives = 51/112 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ I +S D R+V++ +D + VW+ G L+H H LD HP ++ G
Sbjct: 145 ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE--FLLATG 202
Query: 608 YDGRTI-VWDI--WEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVG-QIY 655
RT+ WD+ +E E + + F PDG ++ D G ++Y
Sbjct: 203 SADRTVKFWDLETFELIGTTRPEATGVRAI--AFHPDGQTLFCGLDDGLKVY 252
Score = 43 (20.2 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 680 PLIRDSLGNVLDQETQLVPHRRNIQDP-----LCDSSMIPYEEPYQSMYQQRR 727
P++ + NV E L R P L +S + Y+EP ++ Q+ R
Sbjct: 661 PIVLNRDSNVTSDEPPLTQPARTSSFPVMPVILNQASNVTYDEPSVALTQESR 713
Score = 41 (19.5 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 27/118 (22%), Positives = 42/118 (35%)
Query: 941 KREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKKALSLEDTRVKGDDMAK 1000
+ ++ +V+S K +E + T N LS ++ K ED+ +KG
Sbjct: 442 EESKQSAVVQSATRKKSGLAVEEEPQTQNAF-----LSEQNASKPFDAEDSIIKGITNKF 496
Query: 1001 LPQSSSGPPQGTTERKIDLSLKEPG--SSSAGSGIDVGLSQKHNRIVFADGSQDEKYD 1056
SS PP R + LK P SS D + + F G + D
Sbjct: 497 EKALSSEPPTDEANR---MFLKPPRIHRSSNSKYNDTRRAMSADPATFGKGGMENSGD 551
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 178 (67.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD SG+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SA+ D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 156 (60.0 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 34/122 (27%), Positives = 60/122 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++ +
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S++ D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSAARDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 149 (57.5 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DYKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 148 (57.2 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 32/119 (26%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ + D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEA 296
Score = 56 (24.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 4.7e-09, Sum P(3) = 4.7e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 50 (22.7 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
Score = 42 (19.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 398 HQILCCAYNANGTVFVTGSSDTFARVWSACK 428
H + ++ VTGS D +VW C+
Sbjct: 381 HFVTSLDFHKTAPYVVTGSVDQTVKVWE-CR 410
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 178 (67.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH D+V FD +G+ + + S D +K+W + C+ + GH+ +++ +A+ N
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCR 355
+ SAS D I++W + G + GH V + RP+ L++S S+D T R
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMV----RPNQDGTLIASCSNDQTVR 259
Query: 356 IW 357
+W
Sbjct: 260 VW 261
Score = 158 (60.7 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GHR V IF +++ S+D +K+W ET + +GH + D++
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGK 163
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D I++W I + GH V+++A P I +S+S D T ++W+
Sbjct: 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHI---VSASRDKTIKMWE 220
Query: 359 AR 360
+
Sbjct: 221 VQ 222
Score = 152 (58.6 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 33/119 (27%), Positives = 61/119 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 180 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S +
Sbjct: 240 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSTISEA 296
Score = 150 (57.9 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 253 RSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVW 312
+ G F+++GS D+ +K+W + T CL + GH+ + + S + S ++D +RVW
Sbjct: 306 KPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVW 365
Query: 313 RLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + L H VT++ F +A Y +++ S D T ++W+ R
Sbjct: 366 DFKNKRCMKTLNAHEHFVTSLDF--HKTAPY-VVTGSVDQTVKVWECR 410
Score = 56 (24.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 15/69 (21%), Positives = 30/69 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V +++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 341 VRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGS 399
Query: 608 YDGRTIVWD 616
D VW+
Sbjct: 400 VDQTVKVWE 408
Score = 51 (23.0 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 406 NANGTVFVTGSSDTFARVW----SACKSSVEDSEQPI 438
N +GT+ + S+D RVW CK+ + + E +
Sbjct: 243 NQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVV 279
Score = 49 (22.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDV--HPFNPRIAMSAGYDGRTI-VW 615
F+L+ D I +W+ G + +L GH ++V V H I A D +T+ VW
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHD--NWVRGVLFHSGGKFILSCA--DDKTLRVW 365
Query: 616 D 616
D
Sbjct: 366 D 366
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 171 (65.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 41/120 (34%), Positives = 63/120 (52%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH +V C + R++ T S D +KIWS T + GH I+ + ++ +
Sbjct: 50 LFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSK 109
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ASAS+D IR+W + L+GHT V++I F+P + L+S S D T RIW+
Sbjct: 110 YLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTL---LVSGSWDETVRIWN 166
Score = 151 (58.2 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 34/126 (26%), Positives = 61/126 (48%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASC-RGHEGDITDLAVSSNN 297
L GH + + +++ + SDD+ ++IW E C C +GH ++ + +
Sbjct: 92 LFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKR-CSVRCLKGHTNYVSSIDFNPLG 150
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
TL+ S S D +R+W L DG + +L H+ + +++ S + ++S DG RIW
Sbjct: 151 TLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLC---ATASYDGMARIW 207
Query: 358 DARYSQ 363
D Q
Sbjct: 208 DVLSGQ 213
Score = 147 (56.8 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 37/131 (28%), Positives = 68/131 (51%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
+K +++ L+GH + V F+ G +++GS D V+IW+++ CL H I
Sbjct: 126 EKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIIS 185
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGA-VTAIAFSPRPSAIYQLLSSS 349
+++S++ TL A+AS D + R+W + G + L ++ + F+ Y LL S+
Sbjct: 186 VSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRK--Y-LLVSN 242
Query: 350 DDGTCRIWDAR 360
+ R+WD R
Sbjct: 243 LNSQIRLWDYR 253
Score = 107 (42.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 28/118 (23%), Positives = 59/118 (50%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP--RIAMS 605
++ + W+ ++++ +A D I +W+ V L GH+ +YV + FNP + +S
Sbjct: 99 ISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHT--NYVSSID-FNPLGTLLVS 155
Query: 606 AGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLS--DDVGQIYLLNTGQ 661
+D +W++ +GT +R+ ++ S DGT + D + +I+ + +GQ
Sbjct: 156 GSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQ 213
Score = 67 (28.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 323 LRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
L GH +VT ++ SP I +SS DGT +IW A
Sbjct: 50 LFGHEKSVTCVSVSPNKRWI---ATSSSDGTIKIWSA 83
Score = 62 (26.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVWSA----C-KSSVEDSEQPIHEL 441
S I+ + +A+GT+ T S D AR+W C K+ VE P+ L
Sbjct: 180 SEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNL 229
Score = 42 (19.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 409 GTVFVTGSSDTFARVWS 425
G +T +D + RVW+
Sbjct: 349 GPFIITSGTDPYVRVWA 365
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 151 (58.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
K+L GH + + G + ++GS D+ +++W + GH D+ +A S++
Sbjct: 58 KRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSAD 117
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLR-GHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W ++ GHT V+ + FSP S ++S D T +
Sbjct: 118 NRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPI-IVSCGWDRTVK 176
Query: 356 IWD 358
+W+
Sbjct: 177 VWN 179
Score = 130 (50.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/120 (29%), Positives = 54/120 (45%)
Query: 241 GHRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
GH D V C F + S +++ DR VK+W++ + GH G + + VS + +
Sbjct: 147 GHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGS 206
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L S D +W L DG + L H + A+ FSP Y L + + +IWD
Sbjct: 207 LCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNR---YWLCVAYGP-SIKIWD 261
Score = 79 (32.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 20/86 (23%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L ++ GH+ + V P + + S G D + ++WD
Sbjct: 163 NPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSP-DGSLCTSGGKDSKALLWD 221
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ +G +Y + +++ FSP+
Sbjct: 222 LNDGK--NLYTLEHNDIINALCFSPN 245
Score = 51 (23.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWSACKSS 430
Q L A++ +G G SD RVW S+
Sbjct: 286 QCLSLAWSTDGQTLFAGYSDNTIRVWQVSVSA 317
Score = 49 (22.3 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 15/71 (21%), Positives = 32/71 (45%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP-RIAMSA 606
+N + S D + D + +W+ DG +++L H+ +++ F+P R +
Sbjct: 196 LNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HND---IINALCFSPNRYWLCV 251
Query: 607 GYDGRTIVWDI 617
Y +WD+
Sbjct: 252 AYGPSIKIWDL 262
Score = 42 (19.8 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 551 IVWSLDNRFVLAAIMDCRICVW 572
+ WS D + + A D I VW
Sbjct: 290 LAWSTDGQTLFAGYSDNTIRVW 311
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 174 (66.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 187 WPHMQADQVHGLSLREIGGGFKKHHRAPS----VCSACYAIAKPSTMVQKMQNIK---KL 239
W ++VH + LR APS C I + + N++ +L
Sbjct: 82 WDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + C F + ++T S D +W +ET + GH GD+ L+++ + L
Sbjct: 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL 198
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
S + D ++W + +G+ GH + AI F P +A + SDD TCR++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRLFDL 255
Query: 360 RYSQ 363
R Q
Sbjct: 256 RADQ 259
Score = 141 (54.7 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 46/207 (22%), Positives = 83/207 (40%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ET + GH GD+ L+++ +
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSA-----------IYQL 345
L S + D ++W + +G+ GH + AI F P +A ++ L
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 346 LS-------SSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
+ S D+ C I +S+ S R+ L D +
Sbjct: 256 RADQELMVYSHDNIICGITSVAFSK-SGRLLLAGYDD-FNCNVWDALKADRAGVLAGHDN 313
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWS 425
++ C +G TGS D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 57/243 (23%), Positives = 99/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I++++T GH G ++ +N +V S
Sbjct: 103 CA-YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 160
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 161 SGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDVREGM 217
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG + SH + C A
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVA 277
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW A K+ VL+GH+N V+ V G AVA
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 463 SRS 465
+ S
Sbjct: 329 TGS 331
Score = 55 (24.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ L GH L V +A +
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 201 (75.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 45/126 (35%), Positives = 65/126 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C F + +V TGS DR V++W + C+ GH+G I L
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R I L S S D T
Sbjct: 678 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 734
Query: 354 CRIWDA 359
R+WDA
Sbjct: 735 VRLWDA 740
Score = 195 (73.7 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 59/231 (25%), Positives = 96/231 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH VY A F ++++ S+D V++WS++T CL +GH + D S
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
S +D V R+W P+ + GH V F P + + + S D T R
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV---ATGSADRTVR 652
Query: 356 IWDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQI 400
+WD ++ + I+ L P+ A G+ L+ H
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 401 LCCA--YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN 449
C+ ++ +G + +GS D R+W A K+ ED E + +GH N
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDVETD--DFTTATGHIN 760
Score = 117 (46.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 502 KKLRSVKQAADLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 554
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 555 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 611
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 612 WATDH--YQPLRIF 623
Score = 102 (41.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + ++ +V D + +W+ ++G+ V TGH + L P N R +
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 688
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRFKLVDG-KFSPDG 642
DGR ++WDI G + + E+ G V +FS DG
Sbjct: 689 TDGRVLLWDIGHG--LMVGELKGHTDTVCSLRFSRDG 723
Score = 78 (32.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + +A G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 625 GHLADVNCTRFHPNSNYVA--TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 682
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 683 FLATGATDGRVLLWDIGHG 701
Score = 67 (28.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + RF+ D R+ +W+ G +V L GH+ + L + I S
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 730
Query: 608 YDGRTIVWD 616
D +WD
Sbjct: 731 MDNTVRLWD 739
Score = 41 (19.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGP 64
P K S V++ A L D ++ V+E +D + L I + SGP
Sbjct: 501 PKKLRS-VKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGP 545
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 201 (75.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 45/126 (35%), Positives = 65/126 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C F + +V TGS DR V++W + C+ GH+G I L
Sbjct: 619 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R I L S S D T
Sbjct: 679 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 735
Query: 354 CRIWDA 359
R+WDA
Sbjct: 736 VRLWDA 741
Score = 195 (73.7 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 59/231 (25%), Positives = 96/231 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH VY A F ++++ S+D V++WS++T CL +GH + D S
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
S +D V R+W P+ + GH V F P + + + S D T R
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV---ATGSADRTVR 653
Query: 356 IWDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQI 400
+WD ++ + I+ L P+ A G+ L+ H
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 401 LCCA--YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN 449
C+ ++ +G + +GS D R+W A K+ ED E + +GH N
Sbjct: 714 TVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDLETD--DFTTATGHIN 761
Score = 117 (46.2 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 503 KKLRSVKQAADLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 555
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 556 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 612
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 613 WATDH--YQPLRIF 624
Score = 102 (41.0 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + ++ +V D + +W+ ++G+ V TGH + L P N R +
Sbjct: 631 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 689
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRFKLVDG-KFSPDG 642
DGR ++WDI G + + E+ G V +FS DG
Sbjct: 690 TDGRVLLWDIGHG--LMVGELKGHTDTVCSLRFSRDG 724
Score = 78 (32.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + +A G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 626 GHLADVNCTRFHPNSNYVA--TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 683
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 684 FLATGATDGRVLLWDIGHG 702
Score = 67 (28.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + RF+ D R+ +W+ G +V L GH+ + L + I S
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 731
Query: 608 YDGRTIVWD 616
D +WD
Sbjct: 732 MDNTVRLWD 740
Score = 41 (19.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGP 64
P K S V++ A L D ++ V+E +D + L I + SGP
Sbjct: 502 PKKLRS-VKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGP 546
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 148 (57.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 43/137 (31%), Positives = 62/137 (45%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS- 294
IK +GH + V + G+ + + SDD +KIWSM C + H +I + S
Sbjct: 527 IKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSP 586
Query: 295 --------SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+ N ++ASAS D +R+W + G I L HT V ++AFSP L
Sbjct: 587 TGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGK---HLA 643
Query: 347 SSSDDGTCRIWDARYSQ 363
S S D IW + Q
Sbjct: 644 SGSFDKCVHIWSTQTGQ 660
Score = 146 (56.5 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H+ ++ +++ G ++++ D+ IW T C H D+ +N A
Sbjct: 450 HKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAF-A 508
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIW 357
S S D I V RL PI +GHT V AI + P+ QLL+S SDD T +IW
Sbjct: 509 SCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQG----QLLASCSDDMTLKIW 561
Score = 126 (49.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 43/149 (28%), Positives = 65/149 (43%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETA------FCLASCRGHEG------ 286
LRGH V+ ++ S + +GS D +IW M A L C G
Sbjct: 351 LRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSN 410
Query: 287 -DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQL 345
D+T L + + +L+A+ S D R+W+ DG S L H G + A+ ++ + I
Sbjct: 411 KDVTSLDWNCDGSLLATGSYDGYARIWKT-DGRLASTLGQHKGPIFALKWNKCGNYI--- 466
Query: 346 LSSSDDGTCRIWDARYSQYSPRIYLPKPP 374
LS+ D T IWDA Q + + P
Sbjct: 467 LSAGVDKTTIIWDASTGQCTQQFAFHSAP 495
Score = 96 (38.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 24/102 (23%), Positives = 47/102 (46%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N + +A D + +W+ GS +H+LT H+ Y + P +A S +D +W
Sbjct: 597 NLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLA-SGSFDKCVHIWS 655
Query: 617 IWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLN 658
G + Y+ G + + ++ GT + S G +++L+
Sbjct: 656 TQTGQLVHSYK-GTGGIFEVCWNSKGTKVGASASDGSVFVLD 696
Score = 95 (38.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 32/124 (25%), Positives = 46/124 (37%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-----NPR- 601
VN I W + + + D + +W+ H L HS Y + P NP
Sbjct: 537 VNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNT 596
Query: 602 --IAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLS--DDVGQIYLL 657
I SA +D +WD+ G+ I + FSPDG + D I+
Sbjct: 597 NLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWST 656
Query: 658 NTGQ 661
TGQ
Sbjct: 657 QTGQ 660
Score = 95 (38.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
S D+ + + + + + +GH ++ + L+AS S+D +++W +
Sbjct: 511 STDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCH 570
Query: 322 VLRGHTGAVTAIAFSP------RPSAIYQLLSSSDDGTCRIWD 358
L+ H+ + I +SP P+ L S+S D T R+WD
Sbjct: 571 DLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWD 613
Score = 82 (33.9 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 44/183 (24%), Positives = 65/183 (35%)
Query: 322 VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRIYLPKPPDAITGKX 381
VLRGH V A++P L S S D T RIWD DA T
Sbjct: 350 VLRGHESEVFICAWNPSRDL---LASGSGDSTARIWDMS--------------DANTNSN 392
Query: 382 XXXXXX-XXXXXXXLQSHQ-ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH 439
+ S++ + +N +G++ TGS D +AR+W Q H
Sbjct: 393 QLVLRHCIQKGGAEVPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQ--H 450
Query: 440 ELDVLSGHENDV-NYVQFSGCAV------ASRSAMSDAFKEENVPKFKNSWFCHDNIVTC 492
+ + + N NY+ +G AS + F + P W + +C
Sbjct: 451 KGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASC 510
Query: 493 SRD 495
S D
Sbjct: 511 STD 513
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 147 (56.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 32/123 (26%), Positives = 59/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH V + G+F ++G+ D +++W + T GH D+ +A S++
Sbjct: 57 RSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSAD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W ++ GHT V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVSCVRFSPNSSNPI-IVSCGWDKMVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 98 (39.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSNNT-LVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P L+GH+ V+ +
Sbjct: 12 KGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS + DGT R+WD
Sbjct: 72 S---SDGQFALSGAWDGTLRLWD 91
Score = 85 (35.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/118 (24%), Positives = 54/118 (45%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ + +V V F+P I +S
Sbjct: 111 VAFSADNRQIVSGSRDKTIKLWNTL-GVCKYTIQDEGHTEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKMVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 83 (34.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDSGDVINALCFSPN 244
Score = 47 (21.6 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLIRVW 310
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D I VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLIRVWQVTIGT 316
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 143 (55.4 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ +GH+ A+ A F + + + T S D + +WS++ GH+ +T L S
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQ 71
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL-SSSDDGTCR 355
L+ASAS D +R+W L S + HT V ++ FS A QLL ++S+D + +
Sbjct: 72 GNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFS----ADGQLLVTASEDKSIK 127
Query: 356 IWDARYSQYSPRIY 369
+W ++ +Y
Sbjct: 128 VWSMFRQRFLYSLY 141
Score = 143 (55.4 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 31/117 (26%), Positives = 59/117 (50%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H V CA F GR +++ S+D+ +KIW C+ + G + + N T +A
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA 202
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
SA +D +++W + + + H+ V ++F P ++ L+++S DGT ++ D
Sbjct: 203 SAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNS---LVTASSDGTVKMLD 256
Score = 140 (54.3 bits), Expect = 6.8e-08, Sum P(4) = 6.8e-08
Identities = 36/123 (29%), Positives = 57/123 (46%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH+D V F G + + S DR V++W ++ + + H + + S++ L+
Sbjct: 58 GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLL 117
Query: 301 ASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+AS D I+VW + + L HT V FSP I +S S+D T +IWD
Sbjct: 118 VTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLI---VSCSEDKTIKIWDTT 174
Query: 361 YSQ 363
Q
Sbjct: 175 NKQ 177
Score = 128 (50.1 bits), Expect = 8.4e-06, Sum P(3) = 8.4e-06
Identities = 31/126 (24%), Positives = 55/126 (43%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ + H V F G+ ++T S+D+ +K+WSM L S H + S +
Sbjct: 97 EFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDG 156
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
L+ S S D I++W + ++ G + F+P + I S+ D +IW
Sbjct: 157 RLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCI---ASAGSDHAVKIW 213
Query: 358 DARYSQ 363
D R ++
Sbjct: 214 DIRMNK 219
Score = 95 (38.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 27/110 (24%), Positives = 52/110 (47%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++ D I +W+ + V++ + + +D +P IA SAG D
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA-SAGSDHAV 210
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+WDI ++ Y++ + F P G S+V + G + +L+ +G
Sbjct: 211 KIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEG 260
Score = 64 (27.6 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L N V A+ D + + + ++G L+++L GH+ + + + + S G D + ++
Sbjct: 239 LGNSLVTAS-SDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSK-DGELLTSGGADAQVLI 296
Query: 615 W 615
W
Sbjct: 297 W 297
Score = 49 (22.3 bits), Expect = 3.3e-08, Sum P(4) = 3.3e-08
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDV--LSGH 447
+N NGT + SD ++W + + Q +H V LS H
Sbjct: 194 FNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQ-VHSCGVNCLSFH 237
Score = 44 (20.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 1439 YSRQGHQEFIESTGSQEVGPWWSINGYISAV---ETCKVVNLVYATFPGSGDSCCKITL 1494
+S + +E IE +EV S + + V ++ + + Y PG G+ C+ L
Sbjct: 333 HSHEDRKETIEINPKREVMDLQSSSPPVVDVLSFDSTTMTDSTYRAVPGKGEDICRYFL 391
Score = 38 (18.4 bits), Expect = 3.9e-07, Sum P(4) = 3.9e-07
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 489 IVTCSRDGSAIIW 501
IV+CS D + IW
Sbjct: 159 IVSCSEDKTIKIW 171
Score = 37 (18.1 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 7/31 (22%), Positives = 16/31 (51%)
Query: 1213 ILRDTKSPSEQKSSTSVKDLPSAESDPIPMS 1243
++ + S + +K V D+PS +P++
Sbjct: 395 LMPECSSTTVKKRPEDVSDVPSESLRSVPLA 425
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(4) = 1.4e-05
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 588 ASSYVLDVHPFNP 600
AS ++LD++P +P
Sbjct: 320 ASPHLLDIYPRSP 332
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 154 (59.3 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 34/117 (29%), Positives = 60/117 (51%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H V CA F GR +++ S+D+ +KIW + C+ + G + S N T +A
Sbjct: 143 HTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIA 202
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
SA +D +R+W + + + H+ V ++F P ++ L+++S DGT +I D
Sbjct: 203 SAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNS---LVTASSDGTVKILD 256
Score = 140 (54.3 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
+GH+ A+ A F + + + T S D + +WS++ GH+ +T L S L
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGNL 74
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+ASAS D +R+W L S + HT V ++ FS L+++S+D + ++W +
Sbjct: 75 LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQF---LVTASEDKSIKVW-S 130
Query: 360 RYSQ 363
Y Q
Sbjct: 131 MYRQ 134
Score = 97 (39.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 27/110 (24%), Positives = 50/110 (45%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
+S D R +++ D I +W+ V++ + + +D P IA SAG D
Sbjct: 152 FSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIA-SAGSDHAV 210
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQG 662
+WDI ++ Y++ + F P G S+V + G + +L+ +G
Sbjct: 211 RIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEG 260
Score = 68 (29.0 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 15/68 (22%), Positives = 33/68 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + + ++ A D + + + V+G L+++L GH+ + + + + S G
Sbjct: 231 VNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSK-DGELFTSGG 289
Query: 608 YDGRTIVW 615
D + +VW
Sbjct: 290 ADAQVLVW 297
Score = 62 (26.9 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 22/94 (23%), Positives = 38/94 (40%)
Query: 549 NMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGY 608
N + +S + + +A D + +W+ L+ HS L HP + ++A
Sbjct: 190 NFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSL-VTASS 248
Query: 609 DGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
DG + D+ EG I + + FS DG
Sbjct: 249 DGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDG 282
Score = 57 (25.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 31/139 (22%), Positives = 60/139 (43%)
Query: 592 VLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLS--- 648
V+D+H +P + +D T+ P + +I R+ L + P+ +S ++
Sbjct: 351 VMDLHSSSPPVVDVLSFDSTTVTDSTCRAVPGKGEDICRYFL-NPLLMPECSSTIMKKKP 409
Query: 649 DDVGQIYLLNTGQGESQKDAKYDQFFLGDYRPLIRDSLGNVLDQETQLVPHRRNI-QDPL 707
+DVG E+Q+ + D I + L N+L Q +V R ++ +D L
Sbjct: 410 EDVGD------PPSENQRSVP---LAVADALEHIMEQL-NILTQSVSIVEQRLSLTEDKL 459
Query: 708 CDSSMIPYEEPYQSMYQQR 726
D + ++ S+ QQ+
Sbjct: 460 KDC--LENQQKLFSVIQQK 476
Score = 47 (21.6 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDV--LSGHENDVNYVQFS 457
++ NGT + SD R+W + + Q +H V LS H + + V S
Sbjct: 194 FSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQ-VHSCGVNCLSFHPSGNSLVTAS 247
Score = 40 (19.1 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 489 IVTCSRDGSAIIWIPRSRR 507
IV+CS D + IW S++
Sbjct: 159 IVSCSEDKTIKIWDTTSKQ 177
Score = 39 (18.8 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 551 IVWSLDNRFVLAAIMDCRICVW----NAV---DGSLVHSLTGH-SASSYVLDVHPFNP 600
+ +S D + D ++ VW N V D S + H AS ++LD++P P
Sbjct: 276 VSFSKDGELFTSGGADAQVLVWRTSFNQVHYRDPSKRNLKRLHLEASPHLLDIYPRTP 333
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 164 (62.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 42/127 (33%), Positives = 65/127 (51%)
Query: 239 LRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
L GH V C + F SGRF+ + S+D ++W +E L GH + ++ + +
Sbjct: 297 LSGHTQRV-CRVDFHPSGRFLASASEDTSWRLWDVEKRTELLLQEGHSRGVFAVSFNGDG 355
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHT-GAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+L+ASA D + R+W L G I +L GH G + I S +++LS+S DG +
Sbjct: 356 SLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYALDWGSDGHRVLSASADGWIKC 415
Query: 357 WDARYSQ 363
WD R Q
Sbjct: 416 WDVRKVQ 422
Score = 113 (44.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 30/101 (29%), Positives = 47/101 (46%)
Query: 260 TGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLP 319
TG + V +WS+ LA+ GH + + + +ASAS D R+W +
Sbjct: 276 TGGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTE 335
Query: 320 ISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR 360
+ + GH+ V A++F+ S L S+ D RIWD R
Sbjct: 336 LLLQEGHSRGVFAVSFNGDGSL---LASAGQDSIGRIWDLR 373
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 31/116 (26%), Positives = 55/116 (47%)
Query: 254 SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLA-----------VSSNNTLVAS 302
+G V TG+ VK++S+ + RGH ++ + VS+ + +A+
Sbjct: 217 NGETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLAT 276
Query: 303 ASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ + +W L P++ L GHT V + F PS + L S+S+D + R+WD
Sbjct: 277 GGAEGQVNLWSLSQDTPLATLSGHTQRVCRVDF--HPSGRF-LASASEDTSWRLWD 329
Score = 73 (30.8 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VW 615
F++++ D ++ +++A D +LV SL+GH+ +DV + R +S G+D RT+ +W
Sbjct: 468 FLVSSGFDHKVNIYSADDWALVQSLSGHTGPVASVDVSR-DGRWIVSGGHD-RTVKLW 523
Score = 50 (22.7 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 397 SHQILCCAYNANGTVFVTGSSDTFARVW 424
S + ++N +G++ + D+ R+W
Sbjct: 343 SRGVFAVSFNGDGSLLASAGQDSIGRIW 370
>TAIR|locus:2012971 [details] [associations]
symbol:AT1G71840 "AT1G71840" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HOGENOM:HOG000261676 OMA:VWSFEVG HSSP:P16649
EMBL:AY080732 EMBL:BT001964 IPI:IPI00538190 RefSeq:NP_177329.2
UniGene:At.44000 ProteinModelPortal:Q8RXQ4 SMR:Q8RXQ4 IntAct:Q8RXQ4
PRIDE:Q8RXQ4 EnsemblPlants:AT1G71840.1 GeneID:843514
KEGG:ath:AT1G71840 TAIR:At1g71840 InParanoid:Q8RXQ4
PhylomeDB:Q8RXQ4 ProtClustDB:CLSN2680639 ArrayExpress:Q8RXQ4
Genevestigator:Q8RXQ4 Uniprot:Q8RXQ4
Length = 407
Score = 171 (65.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 43/142 (30%), Positives = 72/142 (50%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGH----EGDITDLAVSSN 296
GH V C F G+ + TGSDD + +W+ +T + +GH EG +T L ++SN
Sbjct: 195 GHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEG-LTCLDINSN 253
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
++L S S D + + + G +S L HT +V + FSP + I + D I
Sbjct: 254 SSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLII 313
Query: 357 WDARYSQYSPRIYLPKPPDAIT 378
WD ++S +PR ++ + + +T
Sbjct: 314 WDLQHS--TPR-FICEHEEGVT 332
Score = 111 (44.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 32/131 (24%), Positives = 56/131 (42%)
Query: 235 NIKKLRGHRDAVYC-AIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
++ GH+ +Y A V TG D +W + A GH+ ++ LA
Sbjct: 62 SVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAF 121
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S + L+AS D V++++ G VL G + + + PR + L+ S+D +
Sbjct: 122 SYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIV---LAGSEDCS 178
Query: 354 CRIWDARYSQY 364
+W+A Y
Sbjct: 179 LWMWNADKEAY 189
Score = 83 (34.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 21/74 (28%), Positives = 36/74 (48%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSA--GYDGRTI 613
++ ++ D + + N V G +V SL H+ S + P + I ++A G D + I
Sbjct: 253 NSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLI 312
Query: 614 VWDIWEGTPIRIYE 627
+WD+ TP I E
Sbjct: 313 IWDLQHSTPRFICE 326
Score = 71 (30.1 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 23/96 (23%), Positives = 39/96 (40%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGH---SASSYVLDVHPFNPRIAMSAGYDGRT 612
D + + D + VWN +H + GH + LD++ N +A+S DG
Sbjct: 208 DGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINS-NSSLAISGSKDGSV 266
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLS 648
+ +I G + + KFSP +I L+
Sbjct: 267 HIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLA 302
Score = 61 (26.5 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 13/69 (18%), Positives = 31/69 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + W ++++ + + +W+++ G+ VH+ GH + + V N +S
Sbjct: 331 VTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVST-NTDFIVSVS 389
Query: 608 YDGRTIVWD 616
D V++
Sbjct: 390 VDNTARVFE 398
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 161 (61.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 247 YCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASND 306
Y A+ +++ SDD + +W C+ GH+ + D+ S + L+ASAS D
Sbjct: 337 YQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFD 396
Query: 307 FVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSP 366
+R+WR DG ++ RGH AV +A+S I +S S D T ++W + + +
Sbjct: 397 KSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLI---VSGSKDSTLKVWSVQTKKLAQ 453
Query: 367 RIYLPKPPDAITG 379
LP D + G
Sbjct: 454 E--LPGHADEVFG 464
Score = 147 (56.8 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 37/126 (29%), Positives = 58/126 (46%)
Query: 241 GHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLV 300
GH +AV F G + +GS D V++W + T +C GH+ + ++ + + +
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGKRL 176
Query: 301 ASASNDFVIRVWRLPDGLPIS-VLRGHTGAVTAIAFSP--RPSAIYQLLSSSDDGTCRIW 357
AS I +W G L GH + +A+ P R +L S+S DG CRIW
Sbjct: 177 ASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCRIW 236
Query: 358 DARYSQ 363
D + Q
Sbjct: 237 DVKLGQ 242
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 37/166 (22%), Positives = 76/166 (45%)
Query: 198 LSLREIGGGFKKHHRA--PSVCSACYAIAKPSTMV--QKMQN--IKKLRGHRDAVYCAIF 251
LS E+ K ++A P + + + +T+ + QN ++++ GH++ V +
Sbjct: 324 LSTEELQESALKRYQAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKY 383
Query: 252 DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRV 311
+ + + S D+ V++W +A+ RGH + +A S+++ L+ S S D ++V
Sbjct: 384 SPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKV 443
Query: 312 WRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
W + L GH V + ++P S + S D ++W
Sbjct: 444 WSVQTKKLAQELPGHADEVFGVDWAPDGSRV---ASGGKDKVIKLW 486
Score = 115 (45.5 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 37/131 (28%), Positives = 56/131 (42%)
Query: 212 RAPSVCSA-CYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIF-----DRSGRFVITGSDDR 265
R S C A I P T QK + L GH+ + C + D R + + S D
Sbjct: 175 RLASGCKAGSIIIWDPETGQQKG---RPLSGHKKHINCLAWEPYHRDPECRKLASASGDG 231
Query: 266 LVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRG 325
+IW ++ CL + GH +T + L+ ++S D +++WR DG+ G
Sbjct: 232 DCRIWDVKLGQCLMNIAGHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSG 290
Query: 326 HTGAVTAIAFS 336
H V IA S
Sbjct: 291 HAHWVNNIALS 301
Score = 89 (36.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 20/68 (29%), Positives = 32/68 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + WS D+R +++ D + VW+ L L GH+ + +D P R+A S G
Sbjct: 420 VYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVA-SGG 478
Query: 608 YDGRTIVW 615
D +W
Sbjct: 479 KDKVIKLW 486
Score = 82 (33.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/100 (26%), Positives = 46/100 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + +S D + + +A D + +W A DG + + GH + Y + + R+ +S
Sbjct: 378 VNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTV-AWSADSRLIVSGS 436
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRFKLVDG-KFSPDGTSI 645
D VW + T E+ G V G ++PDG+ +
Sbjct: 437 KDSTLKVWSVQ--TKKLAQELPGHADEVFGVDWAPDGSRV 474
Score = 59 (25.8 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 566 DCRICVWNAVDGSLVHSLTGHS--------ASSYVLDVHPFNP 600
D + +W A DG L + +GH+ ++ YVL PF+P
Sbjct: 271 DRTVKMWRAADGILCRTFSGHAHWVNNIALSTDYVLRTGPFHP 313
Score = 47 (21.6 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 22/117 (18%), Positives = 44/117 (37%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPIRI 625
D + +W V +TGH + P + ++ SA +D +W +G +
Sbjct: 354 DNTLYLWRNNQNKCVERMTGHQNVVNDVKYSP-DVKLIASASFDKSVRLWRASDGQYMAT 412
Query: 626 YEIGRFKLVDGKFSPDGTSIVLS--DDVGQIYLLNTGQGESQKDAKYDQFFLGDYRP 680
+ + +S D IV D +++ + T + + D+ F D+ P
Sbjct: 413 FRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAP 469
Score = 37 (18.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 5/14 (35%), Positives = 9/14 (64%)
Query: 732 GIEWRPSSIKLAIG 745
G++W P ++A G
Sbjct: 464 GVDWAPDGSRVASG 477
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 170 (64.9 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 38/128 (29%), Positives = 60/128 (46%)
Query: 233 MQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAF-CLASCRGHEGDITDL 291
++ + H D + C + +++T SDD L+K+W E + C GH + +
Sbjct: 89 LERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEKKWSCSQVFEGHTHYVMQI 148
Query: 292 AVS-SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
++ +N ASAS D I+VW+L P L GH V I + Y L+S +D
Sbjct: 149 VINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYYSGGDKPY-LISGAD 207
Query: 351 DGTCRIWD 358
D +IWD
Sbjct: 208 DRLVKIWD 215
Score = 116 (45.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 257 FVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPD 316
+VITG+DD +++++ T + H I +AV + ++S+D +I++W
Sbjct: 71 WVITGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPYILTSSDDMLIKLWDWEK 130
Query: 317 GLPIS-VLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQYSPRIYL 370
S V GHT V I +P+ + Q S+S D T ++W S SP L
Sbjct: 131 KWSCSQVFEGHTHYVMQIVINPKDNN--QFASASLDRTIKVWQLGSS--SPNFTL 181
Score = 73 (30.8 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 28/113 (24%), Positives = 53/113 (46%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D ++++ D + +W+ + + V +L GH+ + ++ HP P I ++ DG T+
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELP-IIITGSEDG-TV-- 253
Query: 616 DIWEGTPIRI-----YEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
IW + R+ Y + R V G + S+ L D G I ++ G+ E
Sbjct: 254 RIWHSSTYRLESTLNYGMERVWCVSGLRGSN--SVALGYDEGSI-IIKLGREE 303
Score = 52 (23.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 395 LQSH--QILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDS 434
L+ H + C ++ + +TGS D R+W + +E +
Sbjct: 225 LEGHAQNVSCVNFHPELPIIITGSEDGTVRIWHSSTYRLEST 266
Score = 38 (18.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 489 IVTCSRDGSAIIW 501
I+T S DG+ IW
Sbjct: 244 IITGSEDGTVRIW 256
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 176 (67.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 48/184 (26%), Positives = 80/184 (43%)
Query: 187 WPHMQADQVHGLSLREIGGGFKKHHRAPS----VCSACYAIAKPSTMVQKMQNIK---KL 239
W ++VH + LR APS C I ++ + N++ +L
Sbjct: 82 WDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSREL 139
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + C F + ++T S D +W +ET + GH GD+ L+++ + L
Sbjct: 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL 198
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
S + D ++W + +G+ GH + AI F P +A + SDD TCR++D
Sbjct: 199 FVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRLFDL 255
Query: 360 RYSQ 363
R Q
Sbjct: 256 RADQ 259
Score = 143 (55.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 50/229 (21%), Positives = 93/229 (40%)
Query: 215 SVCSACYAIAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMET 274
++CS Y++ T ++ ++L GH + C F + ++T S D +W +ET
Sbjct: 119 NICSI-YSL---KTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIET 173
Query: 275 AFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIA 334
+ GH GD+ L+++ + L S + D ++W + +G+ GH + AI
Sbjct: 174 GQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAIC 233
Query: 335 FSPRPSA-----------IYQLLS-------SSDDGTCRIWDARYSQYSPRIYLPKPPDA 376
F P +A ++ L + S D+ C I +S+ S R+ L D
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSK-SGRLLLAGYDD- 291
Query: 377 ITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWS 425
+++ C +G TGS D+F ++W+
Sbjct: 292 FNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 57/243 (23%), Positives = 98/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I+S++T GH G ++ +N +V S
Sbjct: 103 CA-YAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 160
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 161 SGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDIREGM 217
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG + SH + C A
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVA 277
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW K+ VL+GH+N V+ V G AVA
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDTLKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 463 SRS 465
+ S
Sbjct: 329 TGS 331
Score = 51 (23.0 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 15/69 (21%), Positives = 26/69 (37%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+ + L GH L V +A +
Sbjct: 273 ITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 158 (60.7 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 34/129 (26%), Positives = 60/129 (46%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+++ + ++ L GHR F G F +GS D +KIW + C+ + +GH +
Sbjct: 88 LEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVN 147
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + + + S D V++VW L G + + H G + ++ F P + L + S
Sbjct: 148 VLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE---FLLATGS 204
Query: 350 DDGTCRIWD 358
D T + WD
Sbjct: 205 ADKTVKFWD 213
Score = 140 (54.3 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++ +++ H AV C R S R ++TG +D V +W++ + S GH I
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ ++ LVA+ + I++W L + + L GH ++ F P S S
Sbjct: 64 SVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF---ASGS 120
Query: 350 DDGTCRIWDAR 360
D +IWD R
Sbjct: 121 LDTNLKIWDIR 131
Score = 137 (53.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 33/129 (25%), Positives = 54/129 (41%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH + FD S V G+ +K+W +E A + + GH +
Sbjct: 46 IGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCV 105
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ AS S D +++W + I +GHT V + F+P I +S
Sbjct: 106 SVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWI---VSGG 162
Query: 350 DDGTCRIWD 358
+D ++WD
Sbjct: 163 EDNVVKVWD 171
Score = 129 (50.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 30/108 (27%), Positives = 49/108 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
++K I +GH V F GR++++G +D +VK+W + L + HEG I
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQ 189
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSP 337
L + L+A+ S D ++ W L I T V + F+P
Sbjct: 190 SLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNP 237
Score = 91 (37.1 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 24/102 (23%), Positives = 47/102 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN++ ++ D R++++ D + VW+ G L+H H LD HP ++ G
Sbjct: 146 VNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE--FLLATG 203
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGK---FSPDGTSIV 646
+T+ + W+ + G + + F+PDG S++
Sbjct: 204 SADKTVKF--WDLETFELIGSGGTETTGVRCLTFNPDGKSVL 243
Score = 60 (26.2 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 990 DTRVKGDDMAK-LPQSSSGPPQGTTERKIDLSLKEPGSSSAGSGIDVGLSQKHNRIVFAD 1048
++R + D + + +P S + R++ S EP ++ S ++ SQ I D
Sbjct: 485 ESRAELDIIGRTMPYSLQS--KAADSRRLSSSRNEPDLPTS-SLLERSQSQPIEPITLQD 541
Query: 1049 GSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIG-DVN 1107
G+ Y S E + D +T E K R R +S ++ P N D ++D I + N
Sbjct: 542 GNT---YPSD-EGGSWDTAERTN-KESKCRVFGRFNSRSLVRSPPRNHDENSDLISYNAN 596
Query: 1108 R 1108
R
Sbjct: 597 R 597
Score = 48 (22.0 bits), Expect = 3.6e-09, Sum P(3) = 3.6e-09
Identities = 85/412 (20%), Positives = 154/412 (37%)
Query: 1028 SAGSGID-VGLSQKHNRIVFADGSQDEKYDSQLEESAGDMENKTRWAEVKIRTSKRSSSS 1086
++GSG D GL+ ++++ +K D L+E+ K+ K+ S+ S
Sbjct: 318 TSGSGRDQAGLNDNSSKVILGKLPGSQKVDPLLKET------KSLG---KLSVSQNSDP- 367
Query: 1087 GVLLPPDANFDVHNDSIGDVNRCVKLENGHGKFSS--NSET-------SCYGCVRSCSDK 1137
LP D + + VK G+FS+ +S+T S G V +
Sbjct: 368 ---LPKDTKSTGRSSVSQSSDPLVKEPKPLGRFSATHSSDTVKESRTLSSTGSVSDSPHR 424
Query: 1138 EKFGS--DALLDLASVRKEELARHEDIKKSSSFNSTPLVDHQQNDDVHKSRNEDVGTNYR 1195
S + +++V A + K++ + P+V+ + V R E +
Sbjct: 425 VTLTSAPKSASGISTVVPNAAASKRNFGKANPKANPPVVNKEDYFPVIVPRTEPIIEQAS 484
Query: 1196 DELKENPPLRVRIRTKGILRDTKSPSEQK--SSTSVKDLPSAE----SDPIPMSESSLCM 1249
+ E L + RT +K+ ++ SS + DLP++ S P+ +L
Sbjct: 485 ESRAE---LDIIGRTMPYSLQSKAADSRRLSSSRNEPDLPTSSLLERSQSQPIEPITL-Q 540
Query: 1250 EGNLMSEVPEEAEGYGRSSSDQLLNSNLKFKVRDGSKSSYKTRTDIEAFDGGMEDGINHE 1309
+GN P + EG G + + N K +V S R+ D D I++
Sbjct: 541 DGNTY---PSD-EG-GSWDTAERTNKESKCRVFGRFNSRSLVRSPPRNHDEN-SDLISYN 594
Query: 1310 ASGIDSPEAASGSIRKTRSMKMKIISREPIAANCNFK----SKNGHDLVGTSKTVGNSSM 1365
A+ SP + RK + +++RE NF+ S +G ++ + N +
Sbjct: 595 ANRDSSPTES----RKGGRLHSLVLNRERRGRFSNFEGPVSSSSGGNMTAPNSRPSNM-L 649
Query: 1366 EAHDEFFPEEWIPTSTVKSRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSW 1417
+ P + TS S + G HD + R + V + W
Sbjct: 650 KQRGNHVPVDQGITSA--SEEDIVADIMGQHDQFVSSMHSRLAKLQVVRRYW 699
Score = 39 (18.8 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
Identities = 11/52 (21%), Positives = 19/52 (36%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF 456
+ +G V+G D +VW + +HE HE + + F
Sbjct: 151 FTPDGRWIVSGGEDNVVKVWDLTAGKL------LHEF---KSHEGKIQSLDF 193
Score = 37 (18.1 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 1552 EGGTWWKGRITKSQAKSEEF 1571
EGG+W T ++K F
Sbjct: 549 EGGSWDTAERTNKESKCRVF 568
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 174 (66.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 187 WPHMQADQVHGLSLREIGGGFKKHHRAPS----VCSACYAIAKPSTMVQKMQNIK---KL 239
W ++VH + LR APS C I + + N++ +L
Sbjct: 82 WDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + C F + ++T S D +W +ET + GH GD+ L+++ + L
Sbjct: 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
S + D ++W + +G+ GH + AI F P +A + SDD TCR++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRLFDL 255
Query: 360 RYSQ 363
R Q
Sbjct: 256 RADQ 259
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 46/207 (22%), Positives = 82/207 (39%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ET + GH GD+ L+++ +
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI-------------- 342
L S + D ++W + +G+ GH + AI F P +A
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 343 ---YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
+L++ S D C I +S+ S R+ L D +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDD-FNCNVWDALKADRAGVLAGHDN 313
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWS 425
++ C +G TGS D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 56/243 (23%), Positives = 98/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I++++T GH G ++ +N +V S
Sbjct: 103 CA-YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 160
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDVREGM 217
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG SH + C +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW A K+ VL+GH+N V+ V G AVA
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 463 SRS 465
+ S
Sbjct: 329 TGS 331
Score = 108 (43.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN----QIVT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 81 (33.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
LD+ ++ + D +W+ G + TGH+ L + P + R+ +S D +
Sbjct: 152 LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKL 210
Query: 615 WDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQF 673
WD+ EG + + G ++ F P+G + D L + + +D
Sbjct: 211 WDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269
Query: 674 FLG 676
G
Sbjct: 270 ICG 272
Score = 53 (23.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ L GH L V +A +
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 174 (66.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 187 WPHMQADQVHGLSLREIGGGFKKHHRAPS----VCSACYAIAKPSTMVQKMQNIK---KL 239
W ++VH + LR APS C I + + N++ +L
Sbjct: 82 WDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + C F + ++T S D +W +ET + GH GD+ L+++ + L
Sbjct: 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
S + D ++W + +G+ GH + AI F P +A + SDD TCR++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRLFDL 255
Query: 360 RYSQ 363
R Q
Sbjct: 256 RADQ 259
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 46/207 (22%), Positives = 82/207 (39%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ET + GH GD+ L+++ +
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI-------------- 342
L S + D ++W + +G+ GH + AI F P +A
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 343 ---YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
+L++ S D C I +S+ S R+ L D +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDD-FNCNVWDALKADRAGVLAGHDN 313
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWS 425
++ C +G TGS D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 56/243 (23%), Positives = 98/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I++++T GH G ++ +N +V S
Sbjct: 103 CA-YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 160
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDVREGM 217
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG SH + C +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW A K+ VL+GH+N V+ V G AVA
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 463 SRS 465
+ S
Sbjct: 329 TGS 331
Score = 108 (43.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN----QIVT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 81 (33.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
LD+ ++ + D +W+ G + TGH+ L + P + R+ +S D +
Sbjct: 152 LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKL 210
Query: 615 WDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQF 673
WD+ EG + + G ++ F P+G + D L + + +D
Sbjct: 211 WDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269
Query: 674 FLG 676
G
Sbjct: 270 ICG 272
Score = 53 (23.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ L GH L V +A +
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 174 (66.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 187 WPHMQADQVHGLSLREIGGGFKKHHRAPS----VCSACYAIAKPSTMVQKMQNIK---KL 239
W ++VH + LR APS C I + + N++ +L
Sbjct: 82 WDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + C F + ++T S D +W +ET + GH GD+ L+++ + L
Sbjct: 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
S + D ++W + +G+ GH + AI F P +A + SDD TCR++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRLFDL 255
Query: 360 RYSQ 363
R Q
Sbjct: 256 RADQ 259
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 46/207 (22%), Positives = 82/207 (39%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ET + GH GD+ L+++ +
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI-------------- 342
L S + D ++W + +G+ GH + AI F P +A
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 343 ---YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
+L++ S D C I +S+ S R+ L D +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDD-FNCNVWDALKADRAGVLAGHDN 313
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWS 425
++ C +G TGS D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 56/243 (23%), Positives = 98/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I++++T GH G ++ +N +V S
Sbjct: 103 CA-YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 160
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDVREGM 217
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG SH + C +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW A K+ VL+GH+N V+ V G AVA
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 463 SRS 465
+ S
Sbjct: 329 TGS 331
Score = 108 (43.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN----QIVT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 81 (33.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
LD+ ++ + D +W+ G + TGH+ L + P + R+ +S D +
Sbjct: 152 LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKL 210
Query: 615 WDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQF 673
WD+ EG + + G ++ F P+G + D L + + +D
Sbjct: 211 WDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269
Query: 674 FLG 676
G
Sbjct: 270 ICG 272
Score = 53 (23.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ L GH L V +A +
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 174 (66.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 187 WPHMQADQVHGLSLREIGGGFKKHHRAPS----VCSACYAIAKPSTMVQKMQNIK---KL 239
W ++VH + LR APS C I + + N++ +L
Sbjct: 82 WDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + C F + ++T S D +W +ET + GH GD+ L+++ + L
Sbjct: 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
S + D ++W + +G+ GH + AI F P +A + SDD TCR++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRLFDL 255
Query: 360 RYSQ 363
R Q
Sbjct: 256 RADQ 259
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 46/207 (22%), Positives = 82/207 (39%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ET + GH GD+ L+++ +
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI-------------- 342
L S + D ++W + +G+ GH + AI F P +A
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 343 ---YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
+L++ S D C I +S+ S R+ L D +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDD-FNCNVWDALKADRAGVLAGHDN 313
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWS 425
++ C +G TGS D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 56/243 (23%), Positives = 98/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I++++T GH G ++ +N +V S
Sbjct: 103 CA-YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 160
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDVREGM 217
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG SH + C +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW A K+ VL+GH+N V+ V G AVA
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 463 SRS 465
+ S
Sbjct: 329 TGS 331
Score = 108 (43.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN----QIVT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 81 (33.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
LD+ ++ + D +W+ G + TGH+ L + P + R+ +S D +
Sbjct: 152 LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKL 210
Query: 615 WDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQF 673
WD+ EG + + G ++ F P+G + D L + + +D
Sbjct: 211 WDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269
Query: 674 FLG 676
G
Sbjct: 270 ICG 272
Score = 53 (23.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ L GH L V +A +
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 174 (66.3 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 48/184 (26%), Positives = 79/184 (42%)
Query: 187 WPHMQADQVHGLSLREIGGGFKKHHRAPS----VCSACYAIAKPSTMVQKMQNIK---KL 239
W ++VH + LR APS C I + + N++ +L
Sbjct: 82 WDSYTTNKVHAIPLRS--SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 240 RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
GH + C F + ++T S D +W +ET + GH GD+ L+++ + L
Sbjct: 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL 198
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
S + D ++W + +G+ GH + AI F P +A + SDD TCR++D
Sbjct: 199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAF---ATGSDDATCRLFDL 255
Query: 360 RYSQ 363
R Q
Sbjct: 256 RADQ 259
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 46/207 (22%), Positives = 82/207 (39%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
++L GH + C F + ++T S D +W +ET + GH GD+ L+++ +
Sbjct: 137 RELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD 195
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI-------------- 342
L S + D ++W + +G+ GH + AI F P +A
Sbjct: 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 343 ---YQLLSSSDDGT-CRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSH 398
+L++ S D C I +S+ S R+ L D +
Sbjct: 256 RADQELMTYSHDNIICGITSVSFSK-SGRLLLAGYDD-FNCNVWDALKADRAGVLAGHDN 313
Query: 399 QILCCAYNANGTVFVTGSSDTFARVWS 425
++ C +G TGS D+F ++W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 124 (48.7 bits), Expect = 0.00039, P = 0.00039
Identities = 56/243 (23%), Positives = 98/243 (40%)
Query: 248 CAIFDRSGRFVITGSDDRLVKIWSMET----AFCLASCRGHEGDITDLAVSSNNTLVASA 303
CA + SG +V G D + I++++T GH G ++ +N +V S
Sbjct: 103 CA-YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTS- 160
Query: 304 SNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDAR--- 360
S D +W + G + GHTG V +++ +P + ++ +S + D + ++WD R
Sbjct: 161 SGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLF--VSGACDASAKLWDVREGM 217
Query: 361 ----YSQYSPRI----YLPKPPDAITGKXXXX---XXXXXXXXXXLQSHQILCC-----A 404
++ + I + P TG SH + C +
Sbjct: 218 CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVS 277
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY--VQFSGCAVA 462
++ +G + + G D VW A K+ VL+GH+N V+ V G AVA
Sbjct: 278 FSKSGRLLLAGYDDFNCNVWDALKAD---------RAGVLAGHDNRVSCLGVTDDGMAVA 328
Query: 463 SRS 465
+ S
Sbjct: 329 TGS 331
Score = 108 (43.1 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 34/136 (25%), Positives = 60/136 (44%)
Query: 232 KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDL 291
+M+ + LRGH +Y + R +++ S D + IW T + + +
Sbjct: 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC 103
Query: 292 AVSSNNTLVASASNDFVIRVWRLP--DG-LPIS-VLRGHTGAVTAIAFSPRPSAIYQLLS 347
A + + VA D + ++ L +G + +S L GHTG ++ F Q+++
Sbjct: 104 AYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN----QIVT 159
Query: 348 SSDDGTCRIWDARYSQ 363
SS D TC +WD Q
Sbjct: 160 SSGDTTCALWDIETGQ 175
Score = 81 (33.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 25/123 (20%), Positives = 48/123 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
LD+ ++ + D +W+ G + TGH+ L + P + R+ +S D +
Sbjct: 152 LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKL 210
Query: 615 WDIWEGTPIRIYEIGRFKLVDGK-FSPDGTSIVLSDDVGQIYLLNTGQGESQKDAKYDQF 673
WD+ EG + + G ++ F P+G + D L + + +D
Sbjct: 211 WDVREGMCRQTFT-GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 269
Query: 674 FLG 676
G
Sbjct: 270 ICG 272
Score = 53 (23.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/69 (23%), Positives = 27/69 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+ + +S R +LA D VW+A+ L GH L V +A +
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVA-TGS 331
Query: 608 YDGRTIVWD 616
+D +W+
Sbjct: 332 WDSFLKIWN 340
>POMBASE|SPAC25H1.08c [details] [associations]
symbol:SPAC25H1.08c "ribosome biogenesis protein Sqt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.08c GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 HOGENOM:HOG000261676 GO:GO:0000027 HSSP:Q04724
KO:K14818 OrthoDB:EOG45TGWZ PIR:T38388 RefSeq:NP_593812.1
ProteinModelPortal:O13982 STRING:O13982 PRIDE:O13982
EnsemblFungi:SPAC25H1.08c.1 GeneID:2542715 KEGG:spo:SPAC25H1.08c
OMA:PICACAS NextBio:20803763 Uniprot:O13982
Length = 399
Score = 162 (62.1 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ I +L GH+D++ + G ++ TG D V++W T F + +I L+
Sbjct: 95 EQICQLTGHKDSIVAIDWSFDGTYIATGGMDSQVRLWKSSTGFEFITAFETVDEIVWLSW 154
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
+A+ ND I +W LP G + V+ GHT V A F P P +L + D GT
Sbjct: 155 HPKGLFLAAGCNDGSIWMWSLPSGKVVQVMYGHTAPVNAGKFIP-PGVGKRLATVDDSGT 213
Query: 354 CRIWD 358
+W+
Sbjct: 214 LIVWN 218
Score = 69 (29.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
++L A DC I W+ G L+ TGH + + P R+ + D +V+D
Sbjct: 340 YLLTACADCVIRKWDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSD-DTELLVFD 396
Score = 40 (19.1 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 615 WDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVL-SDD 650
WD+ G + Y + ++ +PDG +V SDD
Sbjct: 353 WDVRSGQLLGEYTGHQEPILCMAITPDGKRVVTGSDD 389
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 167 (63.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 40/124 (32%), Positives = 61/124 (49%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ + H + L S
Sbjct: 98 LRTLLGHK-ANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G + GH G V + F PS Y L S S T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEF--HPSIEYLLASGSSSMTI 214
Query: 355 RIWD 358
R WD
Sbjct: 215 RFWD 218
Score = 161 (61.7 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 38/126 (30%), Positives = 59/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDRS-GRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + +S GR + TG DD V +WS+ C+ S GH I L +S
Sbjct: 13 LQEIVAHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQIS 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P S + S S D
Sbjct: 73 AKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV---ASGSLDTDI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDVR 135
Score = 149 (57.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/129 (28%), Positives = 58/129 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V K + L GH + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 VNKPNCVMSLTGHTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L + VAS S D I++W + I + HT AV + FSP L S++
Sbjct: 110 SLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 80 (33.2 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 23/96 (23%), Positives = 45/96 (46%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ TGH V++ HP + +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHP-SIEYLLASG 208
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
TI WD+ + + E + F+PDG
Sbjct: 209 SSSMTIRFWDLEKFHVVSCIEEEATPVRCILFNPDG 244
Score = 44 (20.5 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 1188 EDVGTNYRDELKENPPLRVRIRTKGILRDTKSPSEQKSSTSVKDLPSAESDPIPMSESSL 1247
ED ++ +K N P+ V+ T P ++ T + P A S P+P +E S+
Sbjct: 408 EDEPITAKEAVKPNQPVEVQ---------TPLPKQELPETFQRP-PIASSTPMPRAEPSV 457
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 169 (64.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT--DL 291
+ + +++ H D V C F RF+ T S D+ VKIW+ T + + H +
Sbjct: 648 EKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHF 707
Query: 292 AVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
SS++ L+A+ S+D +++W L + + GHT +V FSP L S S D
Sbjct: 708 TNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKL---LASCSAD 764
Query: 352 GTCRIWDA 359
GT ++WDA
Sbjct: 765 GTLKLWDA 772
Score = 134 (52.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ + N+ +L R H DAVY A F G+ + + D+ ++++ ET L + HE ++
Sbjct: 601 KNITNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV 660
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
A S+++ +A+ S D +++W G + H+ V F+ S+ + LL++
Sbjct: 661 LCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTN--SSHHLLLAT 718
Query: 349 -SDDGTCRIWD 358
S D ++WD
Sbjct: 719 GSSDCFLKLWD 729
Score = 114 (45.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 31/117 (26%), Positives = 56/117 (47%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H+ V+ F + +I+ SDD +++W+ + C+ RGH+ + D + N+ L+
Sbjct: 959 HKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSRLL- 1016
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
S S D ++VW + G H G V + S + + S+S D T +IW+
Sbjct: 1017 SWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDAT---KFSSTSADKTAKIWN 1070
Score = 75 (31.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 571 VWNAVDGSLVH---SLTGHSASSY---VLDVHPFNP--RIAMSAGYDGRTIVWDIWEGTP 622
+WN +G L+H L+ A+++ V D+ F+P ++ +SAG G W++ G
Sbjct: 1068 IWNVSNGELLHLCAPLSEEGAATHGGWVTDLC-FSPDGKMLISAG--GYIKWWNVVTGES 1124
Query: 623 IRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
+ + L SPD + V D++G +Y+L T
Sbjct: 1125 SQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQT 1161
Score = 71 (30.1 bits), Expect = 7.7e-10, Sum P(2) = 7.7e-10
Identities = 29/115 (25%), Positives = 54/115 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWN-AVDGSLVHSLTGHSASSYVLDVHPF-NPRIAMSAGY 608
I ++ D + ++++ D I VWN +D + L GH + V D N R+ +S +
Sbjct: 966 IQFTADEKTLISSSDDAEIQVWNWQLDKCIF--LRGHQET--VKDFRLLKNSRL-LSWSF 1020
Query: 609 DGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIYLLNTGQ 661
DG VW+I G + + + ++ S D T S +D +I+ ++ G+
Sbjct: 1021 DGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVSNGE 1075
Score = 61 (26.5 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 28/120 (23%), Positives = 47/120 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L N +L+ D + VWN + G+ H + D+ + + S D +
Sbjct: 1010 LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFS-STSADKTAKI 1068
Query: 615 WDIWEGTPIRIY----EIGRFK----LVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQK 666
W++ G + + E G + D FSPDG ++ + G I N GES +
Sbjct: 1069 WNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQ 1126
Score = 51 (23.0 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 398 HQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHE 440
HQ +L C + + T F + S+D A++W+ + P+ E
Sbjct: 1041 HQGTVLSCDISHDATKFSSTSADKTAKIWNVSNGELLHLCAPLSE 1085
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 201 (75.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/126 (35%), Positives = 65/126 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C F + +V TGS DR V++W + C+ GH+G I L
Sbjct: 616 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 675
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R I L S S D T
Sbjct: 676 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 732
Query: 354 CRIWDA 359
R+WDA
Sbjct: 733 VRLWDA 738
Score = 195 (73.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 59/231 (25%), Positives = 96/231 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH VY A F ++++ S+D V++WS++T CL +GH + D S
Sbjct: 534 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 593
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
S +D V R+W P+ + GH V F P + + + S D T R
Sbjct: 594 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV---ATGSADRTVR 650
Query: 356 IWDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQI 400
+WD ++ + I+ L P+ A G+ L+ H
Sbjct: 651 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 710
Query: 401 LCCA--YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN 449
C+ ++ +G + +GS D R+W A K+ ED E + +GH N
Sbjct: 711 TVCSLRFSRDGEILASGSMDNTVRLWDAIKA-FEDLETD--DFTTATGHIN 758
Score = 115 (45.5 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 500 KKLRSVKQASDLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 552
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 553 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 609
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 610 WATDH--YQPLRIF 621
Score = 102 (41.0 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + ++ +V D + +W+ ++G+ V TGH + L P N R +
Sbjct: 628 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 686
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRFKLVDG-KFSPDG 642
DGR ++WDI G + + E+ G V +FS DG
Sbjct: 687 TDGRVLLWDIGHG--LMVGELKGHTDTVCSLRFSRDG 721
Score = 78 (32.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + +A G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 623 GHLADVNCTRFHPNSNYVA--TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 680
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 681 FLATGATDGRVLLWDIGHG 699
Score = 67 (28.6 bits), Expect = 0.00037, Sum P(2) = 0.00036
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + RF+ D R+ +W+ G +V L GH+ + L + I S
Sbjct: 670 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 728
Query: 608 YDGRTIVWD 616
D +WD
Sbjct: 729 MDNTVRLWD 737
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGP 64
P K S V++ + L D ++ V+E +D + L I + SGP
Sbjct: 499 PKKLRS-VKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGP 543
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 201 (75.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 45/126 (35%), Positives = 65/126 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C F + +V TGS DR V++W + C+ GH+G I L
Sbjct: 618 QPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 677
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R I L S S D T
Sbjct: 678 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 734
Query: 354 CRIWDA 359
R+WDA
Sbjct: 735 VRLWDA 740
Score = 195 (73.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 59/231 (25%), Positives = 96/231 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH VY A F ++++ S+D V++WS++T CL +GH + D S
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 595
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
S +D V R+W P+ + GH V F P + + + S D T R
Sbjct: 596 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYV---ATGSADRTVR 652
Query: 356 IWDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQI 400
+WD ++ + I+ L P+ A G+ L+ H
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 401 LCCA--YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN 449
C+ ++ +G + +GS D R+W A K+ ED E + +GH N
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTVRLWDAIKA-FEDLETD--DFTTATGHIN 760
Score = 115 (45.5 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 502 KKLRSVKQASDLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 554
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 555 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 611
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 612 WATDH--YQPLRIF 623
Score = 102 (41.0 bits), Expect = 9.7e-08, Sum P(2) = 9.7e-08
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + ++ +V D + +W+ ++G+ V TGH + L P N R +
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 688
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRFKLVDG-KFSPDG 642
DGR ++WDI G + + E+ G V +FS DG
Sbjct: 689 TDGRVLLWDIGHG--LMVGELKGHTDTVCSLRFSRDG 723
Score = 78 (32.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + +A G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 625 GHLADVNCTRFHPNSNYVA--TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 682
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 683 FLATGATDGRVLLWDIGHG 701
Score = 67 (28.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + RF+ D R+ +W+ G +V L GH+ + L + I S
Sbjct: 672 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 730
Query: 608 YDGRTIVWD 616
D +WD
Sbjct: 731 MDNTVRLWD 739
Score = 38 (18.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGP 64
P K S V++ + L D ++ V+E +D + L I + SGP
Sbjct: 501 PKKLRS-VKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGP 545
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 155 (59.6 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
+ GH V C + ++ +TGS DR +KIW + + S GH + + VS+ +
Sbjct: 199 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 258
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ S D ++ W L I GH AV + P I L++ S D T RIWD
Sbjct: 259 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 315
Query: 359 AR 360
R
Sbjct: 316 VR 317
Score = 144 (55.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V+ ++ L GH +AV + +ITGS D +++W + + H+ +
Sbjct: 316 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 375
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + AS S D I+ W+ PDG I L GH + + + + L+S +
Sbjct: 376 AVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNS--DGV--LVSGA 430
Query: 350 DDGTCRIWDARYSQYSPRIYLPKPPDAI 377
D+GT +WD R R++ P ++
Sbjct: 431 DNGTMHLWDWRTGYNFQRVHAAVQPGSL 458
Score = 97 (39.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPSA 341
GH G + +AV N + S D I++W L G L +S L GH V + S R
Sbjct: 201 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVIVSTRSP- 258
Query: 342 IYQLLSSSDDGTCRIWDARYSQ 363
Y L S +D + WD Y++
Sbjct: 259 -Y-LFSCGEDKQVKCWDLEYNK 278
Score = 79 (32.9 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 33/144 (22%), Positives = 54/144 (37%)
Query: 487 DNIVTCSRDGSAIIWIPRSRRS-HGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXX 545
D +VTCSRD +A IW R++ S H G ++
Sbjct: 300 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV 359
Query: 546 XXVNMIVWSLDNRFVLAAIMDCR-----------ICVWNAVDGSLVHSLTGHSASSYVLD 594
+ + + V A ++ R I W DGS + +L+GH+A L
Sbjct: 360 AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLT 419
Query: 595 VHPFNPRIAMSAGYDGRTIVWDIW 618
V+ + + +S +G +WD W
Sbjct: 420 VN--SDGVLVSGADNGTMHLWD-W 440
Score = 42 (19.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 413 VTGSSDTFARVW 424
+TGS DT R+W
Sbjct: 345 ITGSHDTTIRLW 356
Score = 40 (19.1 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPI 438
I CA++ + + +T +D +V+ ++ E++ P+
Sbjct: 464 IFACAFDQSESRLLTAEADKTIKVYKEDDTATEETH-PV 501
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 155 (59.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
+ GH V C + ++ +TGS DR +KIW + + S GH + + VS+ +
Sbjct: 200 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 259
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ S D ++ W L I GH AV + P I L++ S D T RIWD
Sbjct: 260 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 316
Query: 359 AR 360
R
Sbjct: 317 VR 318
Score = 144 (55.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V+ ++ L GH +AV + +ITGS D +++W + + H+ +
Sbjct: 317 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 376
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + AS S D I+ W+ PDG I L GH + + + + L+S +
Sbjct: 377 AVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNS--DGV--LVSGA 431
Query: 350 DDGTCRIWDARYSQYSPRIYLPKPPDAI 377
D+GT +WD R R++ P ++
Sbjct: 432 DNGTMHLWDWRTGYNFQRVHAAVQPGSL 459
Score = 97 (39.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPSA 341
GH G + +AV N + S D I++W L G L +S L GH V + S R
Sbjct: 202 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVIVSTRSP- 259
Query: 342 IYQLLSSSDDGTCRIWDARYSQ 363
Y L S +D + WD Y++
Sbjct: 260 -Y-LFSCGEDKQVKCWDLEYNK 279
Score = 79 (32.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 33/144 (22%), Positives = 54/144 (37%)
Query: 487 DNIVTCSRDGSAIIWIPRSRRS-HGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXX 545
D +VTCSRD +A IW R++ S H G ++
Sbjct: 301 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV 360
Query: 546 XXVNMIVWSLDNRFVLAAIMDCR-----------ICVWNAVDGSLVHSLTGHSASSYVLD 594
+ + + V A ++ R I W DGS + +L+GH+A L
Sbjct: 361 AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLT 420
Query: 595 VHPFNPRIAMSAGYDGRTIVWDIW 618
V+ + + +S +G +WD W
Sbjct: 421 VN--SDGVLVSGADNGTMHLWD-W 441
Score = 42 (19.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 413 VTGSSDTFARVW 424
+TGS DT R+W
Sbjct: 346 ITGSHDTTIRLW 357
Score = 39 (18.8 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPI 438
I CA++ + + +T +D +V+ ++ E++ P+
Sbjct: 465 IFACAFDQSESRLLTAEADKTIKVYREDDTATEETH-PV 502
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 155 (59.6 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
+ GH V C + ++ +TGS DR +KIW + + S GH + + VS+ +
Sbjct: 201 ISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSP 260
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ S D ++ W L I GH AV + P I L++ S D T RIWD
Sbjct: 261 YLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHP---TIDVLVTCSRDSTARIWD 317
Query: 359 AR 360
R
Sbjct: 318 VR 319
Score = 144 (55.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
V+ ++ L GH +AV + +ITGS D +++W + + H+ +
Sbjct: 318 VRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVR 377
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ + + AS S D I+ W+ PDG I L GH + + + + L+S +
Sbjct: 378 AVVLHPRHYTFASGSPDN-IKQWKFPDGSFIQNLSGHNAIINTLTVNS--DGV--LVSGA 432
Query: 350 DDGTCRIWDARYSQYSPRIYLPKPPDAI 377
D+GT +WD R R++ P ++
Sbjct: 433 DNGTMHLWDWRTGYNFQRVHAAVQPGSL 460
Score = 97 (39.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 27/82 (32%), Positives = 38/82 (46%)
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDG-LPISVLRGHTGAVTAIAFSPRPSA 341
GH G + +AV N + S D I++W L G L +S L GH V + S R
Sbjct: 203 GHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLS-LTGHISTVRGVIVSTRSP- 260
Query: 342 IYQLLSSSDDGTCRIWDARYSQ 363
Y L S +D + WD Y++
Sbjct: 261 -Y-LFSCGEDKQVKCWDLEYNK 280
Score = 79 (32.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 33/144 (22%), Positives = 54/144 (37%)
Query: 487 DNIVTCSRDGSAIIWIPRSRRS-HGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXX 545
D +VTCSRD +A IW R++ S H G ++
Sbjct: 302 DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV 361
Query: 546 XXVNMIVWSLDNRFVLAAIMDCR-----------ICVWNAVDGSLVHSLTGHSASSYVLD 594
+ + + V A ++ R I W DGS + +L+GH+A L
Sbjct: 362 AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLT 421
Query: 595 VHPFNPRIAMSAGYDGRTIVWDIW 618
V+ + + +S +G +WD W
Sbjct: 422 VN--SDGVLVSGADNGTMHLWD-W 442
Score = 42 (19.8 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 413 VTGSSDTFARVW 424
+TGS DT R+W
Sbjct: 347 ITGSHDTTIRLW 358
Score = 40 (19.1 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 8/39 (20%), Positives = 21/39 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPI 438
I CA++ + + +T +D +V+ ++ E++ P+
Sbjct: 466 IFACAFDQSESRLLTAEADKTIKVYKEDDTATEETH-PV 503
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 144 (55.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 119 (46.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 147 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 206
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 207 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 260
Score = 108 (43.1 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 55 (24.4 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 108 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 144
Score = 48 (22.0 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 149 (57.5 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 38/131 (29%), Positives = 61/131 (46%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
+ + ++ H D + C F ++V T S D+ VKIW+ T CL H +
Sbjct: 647 ERLLEISAHDDEILCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQF 706
Query: 294 SSNNT--LVASASNDFVIR----VWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
++ L+A+ S+D I+ +W L D + + GH AV+ FSP I S
Sbjct: 707 NNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYI---AS 763
Query: 348 SSDDGTCRIWD 358
S DGT ++W+
Sbjct: 764 CSTDGTVKLWN 774
Score = 148 (57.2 bits), Expect = 5.4e-10, Sum P(3) = 5.4e-10
Identities = 38/136 (27%), Positives = 67/136 (49%)
Query: 231 QKMQNIKKL--RGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI 288
+ ++N+ +L R HRDAVY A F R + + + D+ ++++ E+ L H+ +I
Sbjct: 600 KSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQVFKAESGERLLEISAHDDEI 659
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
S+++ VA+ S D +++W G + V HT V F+ R Y L +
Sbjct: 660 LCCTFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQ-YLLATC 718
Query: 349 SDD----GTCRIWDAR 360
SDD T ++WD +
Sbjct: 719 SDDTYIKNTVQLWDLK 734
Score = 148 (57.2 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L+GH++A+ F + + +++ S D VK+W++ T H G + AVS + +
Sbjct: 1046 LKGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS 1104
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD-GTCRIW 357
+S S D ++W + L+GH V AFSP +LL++ DD G RIW
Sbjct: 1105 RFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFSPSN----KLLATGDDKGDIRIW 1160
Query: 358 D 358
D
Sbjct: 1161 D 1161
Score = 124 (48.7 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 34/116 (29%), Positives = 58/116 (50%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
+R +V F + +I+ + D ++++W+ + C+ +GH+ I D A N+ L+
Sbjct: 1008 YRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEAIKDFAFLENSKLL- 1065
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
S S D ++VW + G H GAV + A SP S + S+S D T +IW
Sbjct: 1066 SWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGS---RFSSTSADKTAKIW 1118
Score = 104 (41.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 242 HRDAVYCAIFD-RSGRFVI-TGSDDRLVK----IWSMETAFCLASCRGHEGDITDLAVSS 295
H + V C F+ R G++++ T SDD +K +W ++ +C + GH ++ S
Sbjct: 697 HTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSP 756
Query: 296 NNTLVASASNDFVIRVWRL 314
N+ +AS S D +++W +
Sbjct: 757 NDDYIASCSTDGTVKLWNV 775
Score = 99 (39.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 31/114 (27%), Positives = 53/114 (46%)
Query: 246 VYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR-GHEGDITDLAVSSNNTLVASAS 304
V C + RS ++ + ++L+ ++ + T+ L H I + + LVA A
Sbjct: 804 VKCCSWSRSSDTILVVAKNKLL-LFDVTTSNLLTQVIISHHSTIQYCDFCAGDELVAVAL 862
Query: 305 NDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
+ I +W + ++ RGHT V + FS S L+SS+D T RIW+
Sbjct: 863 SHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLF---LTSSEDQTIRIWE 913
Score = 74 (31.1 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
+L CA + +G+ F + S+D A++WS SSV +HEL GHE V FS
Sbjct: 1094 VLSCAVSPDGSRFSSTSADKTAKIWSFESSSV------LHEL---KGHEACVRCSAFS 1142
Score = 73 (30.8 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 28/111 (25%), Positives = 44/111 (39%)
Query: 555 LDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIV 614
L+N +L+ D + VWN G H + V P R + S D +
Sbjct: 1059 LENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFS-STSADKTAKI 1117
Query: 615 WDIWEGTPIRIYEI-GRFKLVD-GKFSPDGTSIVLSDDVGQIYLLNTGQGE 663
W +E + + ++E+ G V FSP + DD G I + + GE
Sbjct: 1118 WS-FESSSV-LHELKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGE 1166
Score = 72 (30.4 bits), Expect = 4.3e-10, Sum P(3) = 4.3e-10
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 402 CCAYNANGTVFVTGSSDTFARVWSA---CKSSVEDSEQPIHELDVLSGHENDV 451
C ++++G++F+T S D R+W CKSS D+ ELDV+ H +V
Sbjct: 890 CVTFSSDGSLFLTSSEDQTIRIWETNKVCKSS--DAVLK-SELDVVF-HNGEV 938
Score = 67 (28.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 26/105 (24%), Positives = 46/105 (43%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
++ D + ++++ D I VWN V L GH + + D +S +DG
Sbjct: 1017 FTTDCQTLISSAHDAVIQVWNWQLNECVF-LKGHKEA--IKDFAFLENSKLLSWSFDGTV 1073
Query: 613 IVWDIWEGTPIRIYEIGRFKLVDGKFSPDGT--SIVLSDDVGQIY 655
VW+I G + + R ++ SPDG+ S +D +I+
Sbjct: 1074 KVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1118
Score = 65 (27.9 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 24/96 (25%), Positives = 41/96 (42%)
Query: 569 ICVWNAVDGSLVH---SLTGHSAS----SYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGT 621
I +W+ + G L+H S+T +V D+ F+P M G WD+ G
Sbjct: 1157 IRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLS-FSPDSKMLVSSGGYLKWWDVTTGE 1215
Query: 622 PIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLL 657
++ + L SP+ V D++G +Y+L
Sbjct: 1216 SLQTFYTNGTNLKSIHVSPNFDVYVTVDNLGILYVL 1251
Score = 65 (27.9 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 28/102 (27%), Positives = 44/102 (43%)
Query: 571 VWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYD-GRTIVWDIWEG------TPI 623
+W+ S++H L GH A P N +A G D G +WDI G + +
Sbjct: 1117 IWSFESSSVLHELKGHEACVRCSAFSPSNKLLA--TGDDKGDIRIWDILTGELLHFCSSV 1174
Query: 624 RIYEI----GRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQ 661
+ E G + + D FSPD +V S + + + TG+
Sbjct: 1175 TVDEEEPTHGGW-VTDLSFSPDSKMLVSSGGYLKWWDVTTGE 1215
Score = 56 (24.8 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSA--------CKSSVEDSEQPIH 439
L+ H+ + C A++ + + TG R+W C S D E+P H
Sbjct: 1129 LKGHEACVRCSAFSPSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTH 1183
Score = 45 (20.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSA 588
+ V A+ C I +WN S V GH++
Sbjct: 855 DELVAVALSHCSIELWNIKSLSKVADCRGHTS 886
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 4/19 (21%), Positives = 14/19 (73%)
Query: 1666 VNNYYRSLEAAKDDINVML 1684
+ +++R+ + +DD+ V++
Sbjct: 786 IKDFFRNADEQQDDVEVLV 804
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 197 (74.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 44/124 (35%), Positives = 64/124 (51%)
Query: 236 IKKLRGHRDAVYCAI-FDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++ L GH+ A C++ F G FV +GS D +K+W + C+ RGH + L S
Sbjct: 98 LRTLMGHK-ANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFS 156
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ +ASA++D +++W L G +S GHTG V + F P Y L S S D T
Sbjct: 157 PDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE---YLLASGSSDRTI 213
Query: 355 RIWD 358
R WD
Sbjct: 214 RFWD 217
Score = 168 (64.2 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
+ RGH AV C F G+++ + +DD VK+W + ++ GH G + + N
Sbjct: 142 RYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNE 201
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
L+AS S+D IR W L +S + G G V ++ F+P +Y
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLY 247
Score = 158 (60.7 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
+ K I L GH V + ++ GS +++W +E A L + GH+ +I
Sbjct: 50 INKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANIC 109
Query: 290 DLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
L VAS S D I++W + + RGH+ AV + FSP L S++
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGK---WLASAA 166
Query: 350 DDGTCRIWD 358
DD T ++WD
Sbjct: 167 DDHTVKLWD 175
Score = 153 (58.9 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 34/126 (26%), Positives = 58/126 (46%)
Query: 236 IKKLRGHRDAVYCAIFDR-SGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
++++ H V + + SGR + TG DD V +WS+ C+ S GH + + ++
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLN 72
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ L+ + S IRVW L + L GH + ++ F P + S S D
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV---ASGSQDTNI 129
Query: 355 RIWDAR 360
++WD R
Sbjct: 130 KLWDIR 135
Score = 85 (35.0 bits), Expect = 2.4e-09, Sum P(3) = 2.4e-09
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D +++ +A D + +W+ G ++ GH+ V++ HP N + +++G
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYL-LASG 207
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDG 642
RTI WD+ + + E + F+PDG
Sbjct: 208 SSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDG 243
Score = 57 (25.1 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDI 617
FV + D I +W+ V GHS + L P +A +A D T+ +WD+
Sbjct: 119 FVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAA--DDHTVKLWDL 176
Query: 618 WEG 620
G
Sbjct: 177 TAG 179
Score = 38 (18.4 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 1365 MEAHDEFFPEEWIPTST-VKSRPRSTRNRRGDHDGHPCLLSGRKSNFPVRKLSW 1417
++A D F P IP + ++ R+G HD +L+ R N + W
Sbjct: 465 LKASD-FLPAVKIPQQVELVDEDAMSQIRKG-HDTMCVVLTSRHKNLDTVRAVW 516
Score = 37 (18.1 bits), Expect = 3.0e-09, Sum P(3) = 3.0e-09
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 832 ELKTSSGRRVRKRNLDERDGSA 853
+LK+ SG K +L R GSA
Sbjct: 622 QLKSISGLVKSKSSLSGRHGSA 643
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 144 (55.7 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 34/123 (27%), Positives = 58/123 (47%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 60 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 119
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D +
Sbjct: 120 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVK 178
Query: 356 IWD 358
+W+
Sbjct: 179 VWN 181
Score = 119 (46.9 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 242 HRDAVYCAIF--DRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTL 299
H + V C F + S +++ D+LVK+W++ + GH G + + VS + +L
Sbjct: 150 HSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 209
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
AS D +W L +G + L G + A+ FSP Y L +++ + +IWD
Sbjct: 210 CASGGKDGQAMLWDLNEGKHLYTLDGGD-IINALCFSPNR---YWLCAATGP-SIKIWD 263
Score = 108 (43.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 282 RGHEGDITDLAVSSN-NTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T +A + ++ SAS D I +W+L D G+P LRGH+ V+ +
Sbjct: 15 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 74
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 75 S---SDGQFALSGSWDGTLRLWD 94
Score = 89 (36.4 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 114 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 171
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 172 GWDKLVKVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 228
Score = 82 (33.9 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 165 NPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 223
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 224 LNEGK--HLYTLDGGDIINALCFSPN 247
Score = 55 (24.4 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA---CKSSVED 433
+L A++++ V+GS D ++W+ CK +V+D
Sbjct: 111 VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQD 147
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 288 QCTSLAWSADGQTLFAGYTDNLVRVW 313
Score = 47 (21.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 198 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 253
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 254 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 299
Score = 44 (20.5 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 292 LAWSADGQTLFAGYTDNLVRVWQVTIGT 319
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 170 (64.9 bits), Expect = 4.9e-10, Sum P(4) = 4.9e-10
Identities = 40/121 (33%), Positives = 63/121 (52%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ RGH D + CA FD R V + S D +V +W+ + GH+G + + S +
Sbjct: 41 RSFRGHEDIITCADFDPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPD 100
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+AS D IR+W+ S+++ H GA+ +++FS Y LLSSSDD T ++
Sbjct: 101 GETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGG--Y-LLSSSDDKTLKL 157
Query: 357 W 357
W
Sbjct: 158 W 158
Score = 155 (59.6 bits), Expect = 1.8e-08, Sum P(4) = 1.8e-08
Identities = 34/126 (26%), Positives = 59/126 (46%)
Query: 238 KLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNN 297
K GH+ AVYC + G + + DR +++W + + H G I ++ S++
Sbjct: 84 KFVGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTVQSKCSIIKAHCGAIRSMSFSADG 143
Query: 298 TLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIW 357
+ S+S+D +++WRL D + GH V + SP + S SDD T +W
Sbjct: 144 GYLLSSSDDKTLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLV---ASGSDDKTVMLW 200
Query: 358 DARYSQ 363
D + +
Sbjct: 201 DLNFQK 206
Score = 131 (51.2 bits), Expect = 0.00072, Sum P(4) = 0.00072
Identities = 34/143 (23%), Positives = 61/143 (42%)
Query: 223 IAKPSTMVQ--KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLAS 280
++K ST+ K+ I H D V +F G +I+ S D +KI + + +
Sbjct: 208 VSKYSTLDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQH 267
Query: 281 CRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPS 340
H+ + +++ +ASA +D I++W L G I L + +T + F+ S
Sbjct: 268 YNAHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQ--S 325
Query: 341 AIYQLLSSSDDGTCRIWDARYSQ 363
Y S + C +W + Q
Sbjct: 326 GDYFATGGSQN-LCMVWKTNFDQ 347
Score = 69 (29.3 bits), Expect = 4.9e-10, Sum P(4) = 4.9e-10
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNY 453
+N +G F TG S VW K++ + + Q I ++ + +NDV Y
Sbjct: 322 FNQSGDYFATGGSQNLCMVW---KTNFDQNIQNIEQVQRSTVRQNDVEY 367
Score = 50 (22.7 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 28/122 (22%), Positives = 54/122 (44%)
Query: 930 DRNLQNMQQQHKREEEQTIVESEFMGKPLELLESQSDTGNRKRLVLKLSLRDHKKALSLE 989
D+N+QN++Q + Q VE G + L + T + +S+ ++ L+
Sbjct: 346 DQNIQNIEQVQRSTVRQNDVEYSSGGLYAQTLFKTNKTASLSPSKKTISIIPPQQ---LQ 402
Query: 990 DT-RVKGDDM---AKLPQS--SSGPPQGTTERKIDLSLKE---PGSSSAGSGIDVGLSQK 1040
DT +GDD ++ ++ S+ P +++ L+L E PG G+ ++ S
Sbjct: 403 DTFNNRGDDELNNGRVHENKQSNSPTFSQQQQQQQLNLSENQYPGLEIVGNQFNLQQSTL 462
Query: 1041 HN 1042
N
Sbjct: 463 SN 464
Score = 46 (21.3 bits), Expect = 4.9e-10, Sum P(4) = 4.9e-10
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 1057 SQLEESAGDMENKTRWAEVKIRTSKRSSSSGVLLPPDANFDVHNDSIGDVNRCVKLENG- 1115
+ +E S+G + +T + K + S + ++PP D N+ GD +L NG
Sbjct: 363 NDVEYSSGGLYAQTLFKTNKTASLSPSKKTISIIPPQQLQDTFNNR-GDD----ELNNGR 417
Query: 1116 -HGKFSSNSET 1125
H SNS T
Sbjct: 418 VHENKQSNSPT 428
Score = 43 (20.2 bits), Expect = 0.00072, Sum P(4) = 0.00072
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 95 VNSGNDNDDGISFPLSYNKLVERYPHIE 122
V SG+D+ + + L++ K+V +Y ++
Sbjct: 188 VASGSDDKTVMLWDLNFQKIVSKYSTLD 215
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 14/68 (20%), Positives = 27/68 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN I F+ +A D +I +W+ G +++L + + + A + G
Sbjct: 275 VNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFA-TGG 333
Query: 608 YDGRTIVW 615
+VW
Sbjct: 334 SQNLCMVW 341
Score = 40 (19.1 bits), Expect = 1.9e-09, Sum P(4) = 1.9e-09
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 934 QNMQQQHKREEEQTIVESEFMGKPLELLESQ-SDTGNRKRLV 974
Q QQQ E E +G L +S S+ N+ L+
Sbjct: 431 QQQQQQQLNLSENQYPGLEIVGNQFNLQQSTLSNNNNQNNLI 472
Score = 39 (18.8 bits), Expect = 4.9e-10, Sum P(4) = 4.9e-10
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 1427 YRYIPQLGDEVIYSRQGHQEFIESTGSQEVGP 1458
++Y+ L + V+ S Q + F+ + P
Sbjct: 551 FQYMTNLENRVVQSEQLQKSFVSQNHQNTLDP 582
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 161 (61.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI------- 288
+K +GH + V +D SG + + SDD +KIWSM+ C+ + H +I
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 289 TDLAVSS--NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
T A S+ +N ++ASAS D +R+W + G+ I L H V ++AFSP Y L
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP--DGKY-LA 471
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 472 SGSFDKCVHIWNTQ 485
Score = 147 (56.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G ++++ D+ IW T H D+
Sbjct: 270 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 329
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
NNT AS S D I V RL P+ +GHT V AI + P S + L S SDD T
Sbjct: 330 Q-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP--SGML-LASCSDDMT 385
Query: 354 CRIWDAR 360
+IW +
Sbjct: 386 LKIWSMK 392
Score = 133 (51.9 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASC---RGHE--- 285
LRGH V+ ++ + +GS D +IW++ T L C GH+
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 237
Query: 286 -GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S+ TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYI-- 294
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 295 -LSAGVDKTTIIWDA 308
Score = 101 (40.6 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 29/123 (23%), Positives = 46/123 (37%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIA---- 603
VN I W + + D + +W+ + VH L HS Y + P P +
Sbjct: 365 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 424
Query: 604 ----MSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
SA +D +WD+ G I + + FSPDG + +++ NT
Sbjct: 425 NIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 484
Query: 660 GQG 662
G
Sbjct: 485 QSG 487
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 41/182 (22%), Positives = 68/182 (37%)
Query: 321 SVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIWDARYSQYSPRIYLPKPPDAITG 379
+VLRGH V A++P + LL+S S D T RIW+ L + + +
Sbjct: 176 TVLRGHESEVFICAWNP----VSDLLASGSGDSTARIWN-----------LNENSNGGST 220
Query: 380 KXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH 439
+ + + +N++GT+ TGS D FAR+W+ + Q
Sbjct: 221 QLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKG 280
Query: 440 ELDVLSGHENDVNYVQFSGCAV------ASRSAMSDAFKEENVPKFKNSWFCHDNIVTCS 493
+ L ++ NY+ +G A F + P W + +CS
Sbjct: 281 PIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCS 339
Query: 494 RD 495
D
Sbjct: 340 TD 341
Score = 76 (31.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/210 (20%), Positives = 74/210 (35%)
Query: 408 NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAM 467
N T F + S+D V C+ + +P+ GH N+VN +++ + S
Sbjct: 331 NNTTFASCSTDMCIHV---CRLGCD---RPVK---TFQGHTNEVNAIKWDPSGMLLASCS 381
Query: 468 SDAFKEENVPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXX 527
D + + K HD + S++ I W P + A
Sbjct: 382 DDMTLK--IWSMKQDACVHD-LQAHSKEIYTIKWSPTGPATSNPNSNIMLA-SASFDSTV 437
Query: 528 XXXXXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V + +S D +++ + D + +WN GSLVHS G +
Sbjct: 438 RLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-T 496
Query: 588 ASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
+ + + ++ SA DG V D+
Sbjct: 497 GGIFEVCWNARGDKVGASAS-DGSVCVLDL 525
Score = 47 (21.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDS 434
L HQ + A++ +G +GS D +W+ S+ S
Sbjct: 451 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHS 492
Score = 46 (21.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 1365 MEAHD-EFFPEEWIPTSTVKSRPRS 1388
++AH E + +W PT S P S
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNS 424
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 161 (61.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI------- 288
+K +GH + V +D SG + + SDD +KIWSM+ C+ + H +I
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 289 TDLAVSS--NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
T A S+ +N ++ASAS D +R+W + G+ I L H V ++AFSP Y L
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSP--DGKY-LA 471
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 472 SGSFDKCVHIWNTQ 485
Score = 147 (56.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G ++++ D+ IW T H D+
Sbjct: 270 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 329
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
NNT AS S D I V RL P+ +GHT V AI + P S + L S SDD T
Sbjct: 330 Q-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP--SGML-LASCSDDMT 385
Query: 354 CRIWDAR 360
+IW +
Sbjct: 386 LKIWSMK 392
Score = 133 (51.9 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASC---RGHE--- 285
LRGH V+ ++ + +GS D +IW++ T L C GH+
Sbjct: 178 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 237
Query: 286 -GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S+ TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 238 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYI-- 294
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 295 -LSAGVDKTTIIWDA 308
Score = 101 (40.6 bits), Expect = 5.0e-10, Sum P(2) = 5.0e-10
Identities = 29/123 (23%), Positives = 46/123 (37%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIA---- 603
VN I W + + D + +W+ + VH L HS Y + P P +
Sbjct: 365 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNS 424
Query: 604 ----MSAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
SA +D +WD+ G I + + FSPDG + +++ NT
Sbjct: 425 NIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 484
Query: 660 GQG 662
G
Sbjct: 485 QSG 487
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 41/182 (22%), Positives = 68/182 (37%)
Query: 321 SVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIWDARYSQYSPRIYLPKPPDAITG 379
+VLRGH V A++P + LL+S S D T RIW+ L + + +
Sbjct: 176 TVLRGHESEVFICAWNP----VSDLLASGSGDSTARIWN-----------LNENSNGGST 220
Query: 380 KXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH 439
+ + + +N++GT+ TGS D FAR+W+ + Q
Sbjct: 221 QLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKG 280
Query: 440 ELDVLSGHENDVNYVQFSGCAV------ASRSAMSDAFKEENVPKFKNSWFCHDNIVTCS 493
+ L ++ NY+ +G A F + P W + +CS
Sbjct: 281 PIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCS 339
Query: 494 RD 495
D
Sbjct: 340 TD 341
Score = 76 (31.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/210 (20%), Positives = 74/210 (35%)
Query: 408 NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAM 467
N T F + S+D V C+ + +P+ GH N+VN +++ + S
Sbjct: 331 NNTTFASCSTDMCIHV---CRLGCD---RPVK---TFQGHTNEVNAIKWDPSGMLLASCS 381
Query: 468 SDAFKEENVPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXX 527
D + + K HD + S++ I W P + A
Sbjct: 382 DDMTLK--IWSMKQDACVHD-LQAHSKEIYTIKWSPTGPATSNPNSNIMLA-SASFDSTV 437
Query: 528 XXXXXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V + +S D +++ + D + +WN GSLVHS G +
Sbjct: 438 RLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-T 496
Query: 588 ASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
+ + + ++ SA DG V D+
Sbjct: 497 GGIFEVCWNARGDKVGASAS-DGSVCVLDL 525
Score = 47 (21.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDS 434
L HQ + A++ +G +GS D +W+ S+ S
Sbjct: 451 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHS 492
Score = 46 (21.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 1365 MEAHD-EFFPEEWIPTSTVKSRPRS 1388
++AH E + +W PT S P S
Sbjct: 400 LQAHSKEIYTIKWSPTGPATSNPNS 424
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 158 (60.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 48/201 (23%), Positives = 85/201 (42%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 12 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 71
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-- 348
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S
Sbjct: 72 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEAT 129
Query: 349 -SDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNA 407
S+ G W +S ++ D T + H + ++
Sbjct: 130 GSEVGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 188
Query: 408 NGTVFVTGSSDTFARVWSACK 428
VTGS D +VW C+
Sbjct: 189 TAPYVVTGSVDQTVKVWE-CR 208
Score = 135 (52.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 28/97 (28%), Positives = 50/97 (51%)
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
S D +K+W + C+ + GH+ +++ +A+ N + SAS D I++W + G +
Sbjct: 1 SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVK 60
Query: 322 VLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIW 357
GH V + RP+ L++S S+D T R+W
Sbjct: 61 TFTGHREWVRMV----RPNQDGTLIASCSNDQTVRVW 93
Score = 63 (27.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 20/128 (15%), Positives = 44/128 (34%)
Query: 489 IVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXV 548
I +CS D + +W+ ++ ++ + V
Sbjct: 81 IASCSNDQTVRVWVVATKECKAELREHEHVVEC-ISWAPESSYSSISEATGSEVGHDNWV 139
Query: 549 NMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGY 608
+++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 140 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGSV 198
Query: 609 DGRTIVWD 616
D VW+
Sbjct: 199 DQTVKVWE 206
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 158 (60.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 48/201 (23%), Positives = 85/201 (42%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
Q + I+ + GH V +G +++ S D+ +K+W ++T +C+ + GH +
Sbjct: 9 QGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 68
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS-- 348
+ + + TL+AS SND +RVW + + LR H V I+++P S Y +S
Sbjct: 69 VRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--YSSISEAT 126
Query: 349 -SDDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNA 407
S+ G W +S ++ D T + H + ++
Sbjct: 127 GSEVGHDN-WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHK 185
Query: 408 NGTVFVTGSSDTFARVWSACK 428
VTGS D +VW C+
Sbjct: 186 TAPYVVTGSVDQTVKVWE-CR 205
Score = 129 (50.5 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 267 VKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGH 326
+K+W + C+ + GH+ +++ +A+ N + SAS D I++W + G + GH
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 327 TGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIW 357
V + RP+ L++S S+D T R+W
Sbjct: 63 REWVRMV----RPNQDGTLIASCSNDQTVRVW 90
Score = 63 (27.2 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 20/128 (15%), Positives = 44/128 (34%)
Query: 489 IVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXXXXXXXXXXXXXXXXXXXXXXV 548
I +CS D + +W+ ++ ++ + V
Sbjct: 78 IASCSNDQTVRVWVVATKECKAELREHEHVVEC-ISWAPESSYSSISEATGSEVGHDNWV 136
Query: 549 NMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGY 608
+++ +F+L+ D + VW+ + + +L H LD H P + ++
Sbjct: 137 RGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGSV 195
Query: 609 DGRTIVWD 616
D VW+
Sbjct: 196 DQTVKVWE 203
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 162 (62.1 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 42/140 (30%), Positives = 63/140 (45%)
Query: 222 AIAKPSTMVQ-KMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLAS 280
+I KP K+ + + GH V C + + TG+ DR++KIW + + S
Sbjct: 152 SIPKPKWHAPWKLSRV--ISGHLGWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLS 209
Query: 281 CRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPS 340
GH + +AVS+ + + S D ++ W L I GH AV ++A P
Sbjct: 210 LTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHP--- 266
Query: 341 AIYQLLSSSDDGTCRIWDAR 360
I L +S D T RIWD R
Sbjct: 267 TIDVLATSGRDSTARIWDMR 286
Score = 161 (61.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 39/143 (27%), Positives = 65/143 (45%)
Query: 235 NIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS 294
N+ L GH + V + + +ITGS D V++W + + + H+ + + +
Sbjct: 290 NVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLH 349
Query: 295 SNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTC 354
+ + ASAS D I+ WR P+G + + GHT V +A + L+S D+GT
Sbjct: 350 PSLYMFASASPDN-IKQWRCPEGKFVQNISGHTSIVNCMAANSEGV----LVSGGDNGTM 404
Query: 355 RIWDARYSQYSPRIYLPKPPDAI 377
WD R R P P ++
Sbjct: 405 FFWDWRTGYNFQRFQAPVQPGSM 427
Score = 134 (52.2 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 30/116 (25%), Positives = 50/116 (43%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
I+ GH AVY + + T D +IW M T + + GH + + +
Sbjct: 249 IRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQA 308
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDD 351
N + + S+D +R+W L G + L H +V +I P ++Y S+S D
Sbjct: 309 TNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHP---SLYMFASASPD 361
Score = 133 (51.9 bits), Expect = 9.9e-06, Sum P(2) = 9.9e-06
Identities = 32/121 (26%), Positives = 54/121 (44%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH V ++ + +DR VK W +E + GH + LA+
Sbjct: 210 LTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTID 269
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAI-AFSPRPSAIYQLLSSSDDGTCRIW 357
++A++ D R+W + + L GHT V ++ A + P Q+++ S D T R+W
Sbjct: 270 VLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNP----QIITGSHDSTVRLW 325
Query: 358 D 358
D
Sbjct: 326 D 326
Score = 69 (29.3 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 571 VWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPI 623
+W+ + VH+LTGH+ + + NP+I ++ +D +WD+ G +
Sbjct: 282 IWDMRTKANVHTLTGHTNTVASVVAQATNPQI-ITGSHDSTVRLWDLAAGKSV 333
Score = 58 (25.5 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 559 FVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR-IAMSAGYDGRTIVWDI 617
++ A+ I W +G V +++GH++ +++ N + +S G +G WD
Sbjct: 353 YMFASASPDNIKQWRCPEGKFVQNISGHTS---IVNCMAANSEGVLVSGGDNGTMFFWD- 408
Query: 618 W 618
W
Sbjct: 409 W 409
Score = 54 (24.1 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHP 597
V +V N ++ D + +W+ G V +LT H S + +HP
Sbjct: 301 VASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHP 350
Score = 38 (18.4 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH 439
I ++ +G+ +T +D +V+ + E+S PI+
Sbjct: 433 IFAMCFDQSGSRLITAEADKTIKVYKEDDEASEESH-PIN 471
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 159 (61.0 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 45/134 (33%), Positives = 67/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS- 294
+K +GH + V +D SG + + SDD +KIWSM+ C+ + H +I + S
Sbjct: 351 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 410
Query: 295 -----SN---NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
SN N ++ASAS D +R+W + G+ I L H V ++AFSP Y L
Sbjct: 411 TGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSP--DGKY-LA 467
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 468 SGSFDKCVHIWNTQ 481
Score = 147 (56.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G ++++ D+ IW T H D+
Sbjct: 266 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 325
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
NNT AS S D I V RL P+ +GHT V AI + P S + L S SDD T
Sbjct: 326 Q-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP--SGML-LASCSDDMT 381
Query: 354 CRIWDAR 360
+IW +
Sbjct: 382 LKIWSMK 388
Score = 133 (51.9 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASC---RGHE--- 285
LRGH V+ ++ + +GS D +IW++ T L C GH+
Sbjct: 174 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPS 233
Query: 286 -GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S+ TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 234 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYI-- 290
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 291 -LSAGVDKTTIIWDA 304
Score = 100 (40.3 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 30/123 (24%), Positives = 47/123 (38%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP------- 600
VN I W + + D + +W+ + VH L HS Y + P P
Sbjct: 361 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNS 420
Query: 601 RIAM-SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
I + SA +D +WD+ G I + + FSPDG + +++ NT
Sbjct: 421 NIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 480
Query: 660 GQG 662
G
Sbjct: 481 QSG 483
Score = 85 (35.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 43/182 (23%), Positives = 67/182 (36%)
Query: 321 SVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIWDARYSQYSPRIYLPKPPDAITG 379
+VLRGH V A++P + LL+S S D T RIW+ + S L G
Sbjct: 172 TVLRGHESEVFICAWNP----VSDLLASGSGDSTARIWNLNENSNSGSTQLVLRHCIREG 227
Query: 380 KXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH 439
+ + +N++GT+ TGS D FAR+W+ + Q
Sbjct: 228 GHDVPS-----------NKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKG 276
Query: 440 ELDVLSGHENDVNYVQFSGCAV------ASRSAMSDAFKEENVPKFKNSWFCHDNIVTCS 493
+ L ++ NY+ +G A F + P W + +CS
Sbjct: 277 PIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCS 335
Query: 494 RD 495
D
Sbjct: 336 TD 337
Score = 73 (30.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 41/210 (19%), Positives = 74/210 (35%)
Query: 408 NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAM 467
N T F + S+D V C+ + +P+ GH N+VN +++ + S
Sbjct: 327 NNTTFASCSTDMCIHV---CRLGCD---RPVK---TFQGHTNEVNAIKWDPSGMLLASCS 377
Query: 468 SDAFKEENVPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXX 527
D + + K HD + S++ I W P + A
Sbjct: 378 DDMTLK--IWSMKQDTCVHD-LQAHSKEIYTIKWSPTGPGTSNPNSNIMLA-SASFDSTV 433
Query: 528 XXXXXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V + +S D +++ + D + +WN G+LVHS G +
Sbjct: 434 RLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSYRG-T 492
Query: 588 ASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
+ + + ++ SA DG V D+
Sbjct: 493 GGIFEVCWNARGDKVGASAS-DGSVCVLDL 521
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
L HQ + A++ +G +GS D +W+
Sbjct: 447 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWN 479
Score = 43 (20.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 1365 MEAHD-EFFPEEWIPTSTVKSRPRS 1388
++AH E + +W PT S P S
Sbjct: 396 LQAHSKEIYTIKWSPTGPGTSNPNS 420
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 198 (74.8 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 44/126 (34%), Positives = 65/126 (51%)
Query: 234 QNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
Q ++ GH V C + + +V TGS DR V++W + C+ GH+G I L
Sbjct: 619 QPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTF 678
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
S N +A+ + D + +W + GL + L+GHT V ++ FS R I L S S D T
Sbjct: 679 SPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS-RDGEI--LASGSMDNT 735
Query: 354 CRIWDA 359
R+WDA
Sbjct: 736 VRLWDA 741
Score = 192 (72.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 58/231 (25%), Positives = 96/231 (41%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
+K L GH VY A F ++++ S+D V++WS++T CL +GH + D S
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP 596
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
S +D V R+W P+ + GH V + P + + + S D T R
Sbjct: 597 YGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYV---ATGSADRTVR 653
Query: 356 IWDAR-------YSQYSPRIY-LPKPPD-------AITGKXXXXXXXXXXXXXXLQSHQI 400
+WD ++ + I+ L P+ A G+ L+ H
Sbjct: 654 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 713
Query: 401 LCCA--YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHEN 449
C+ ++ +G + +GS D R+W A K+ ED E + +GH N
Sbjct: 714 TVCSLRFSRDGEILASGSMDNTVRLWDAVKA-FEDLETD--DFTTATGHIN 761
Score = 115 (45.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 39/134 (29%), Positives = 58/134 (43%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
KKLR + A ++ D+ SDD L +I +TA L GH G + + S +
Sbjct: 503 KKLRSVKQASDLSLIDKE-------SDDVLERIMDEKTASELKILYGHSGPVYGASFSPD 555
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRI 356
+ S+S D +R+W L + +GH V FSP Y +S D R+
Sbjct: 556 RNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYG---YYFVSGGHDRVARL 612
Query: 357 WDARYSQYSP-RIY 369
W + Y P RI+
Sbjct: 613 WATDH--YQPLRIF 624
Score = 103 (41.3 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
VN + ++ +V D + +W+ ++G+ V TGH + L P N R +
Sbjct: 631 VNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP-NGRFLATGA 689
Query: 608 YDGRTIVWDIWEGTPIRIYEI-GRFKLVDG-KFSPDG 642
DGR ++WDI G + + E+ G V +FS DG
Sbjct: 690 TDGRVLLWDIGHG--LMVGELKGHTDTVCSLRFSRDG 724
Score = 78 (32.5 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 585 GHSASSYVLDVHPFNPRIAMSAGYDGRTI-VWDIWEGTPIRIYEIGRFKLVDGKFSPDGT 643
GH A HP + +A G RT+ +WD+ G +RI+ + + FSP+G
Sbjct: 626 GHLADVNCTRYHPNSNYVA--TGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGR 683
Query: 644 SIVLSDDVGQIYLLNTGQG 662
+ G++ L + G G
Sbjct: 684 FLATGATDGRVLLWDIGHG 702
Score = 67 (28.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
++ + +S + RF+ D R+ +W+ G +V L GH+ + L + I S
Sbjct: 673 IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGS 731
Query: 608 YDGRTIVWD 616
D +WD
Sbjct: 732 MDNTVRLWD 740
Score = 38 (18.4 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 19 PLKFSSTVQEMAQLEQQDMVANQVVEADVDLREVYFLIIHFLSSGP 64
P K S V++ + L D ++ V+E +D + L I + SGP
Sbjct: 502 PKKLRS-VKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGP 546
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 158 (60.7 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 44/134 (32%), Positives = 68/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDI------- 288
+K +GH + V +D SG + + SDD +KIWSM+ C+ + H +I
Sbjct: 356 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 415
Query: 289 TDLAVSSNNT--LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
T A S+ N+ ++ASAS D +R+W + G+ + L H V ++AFSP Y L
Sbjct: 416 TGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSP--DGKY-LA 472
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 473 SGSFDKCVHIWNTQ 486
Score = 147 (56.8 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 38/127 (29%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G ++++ D+ IW T H D+
Sbjct: 271 NLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 330
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
NNT AS S D I V RL P+ +GHT V AI + P S + L S SDD T
Sbjct: 331 Q-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDP--SGML-LASCSDDMT 386
Query: 354 CRIWDAR 360
+IW +
Sbjct: 387 LKIWSMK 393
Score = 133 (51.9 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASC---RGHE--- 285
LRGH V+ ++ + +GS D +IW++ T L C GH+
Sbjct: 179 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPS 238
Query: 286 -GDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S+ TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 239 NKDVTSLDWNSDGTLLATGSYDGFARIWT-EDGNLASTLGQHKGPIFALKWNKKGNYI-- 295
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 296 -LSAGVDKTTIIWDA 309
Score = 100 (40.3 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 29/123 (23%), Positives = 48/123 (39%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-----NPRI 602
VN I W + + D + +W+ + VH L HS Y + P NP
Sbjct: 366 VNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNS 425
Query: 603 AM---SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
++ SA +D +WD+ G + + + FSPDG + +++ NT
Sbjct: 426 SIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNT 485
Query: 660 GQG 662
G
Sbjct: 486 QSG 488
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 41/182 (22%), Positives = 68/182 (37%)
Query: 321 SVLRGHTGAVTAIAFSPRPSAIYQLLSS-SDDGTCRIWDARYSQYSPRIYLPKPPDAITG 379
+VLRGH V A++P + LL+S S D T RIW+ L + + +
Sbjct: 177 TVLRGHESEVFICAWNP----VSDLLASGSGDSTARIWN-----------LNENSNGGST 221
Query: 380 KXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIH 439
+ + + +N++GT+ TGS D FAR+W+ + Q
Sbjct: 222 QLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKG 281
Query: 440 ELDVLSGHENDVNYVQFSGCAV------ASRSAMSDAFKEENVPKFKNSWFCHDNIVTCS 493
+ L ++ NY+ +G A F + P W + +CS
Sbjct: 282 PIFALKWNKKG-NYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCS 340
Query: 494 RD 495
D
Sbjct: 341 TD 342
Score = 76 (31.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/210 (20%), Positives = 74/210 (35%)
Query: 408 NGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAM 467
N T F + S+D V C+ + +P+ GH N+VN +++ + S
Sbjct: 332 NNTTFASCSTDMCIHV---CRLGCD---RPVK---TFQGHTNEVNAIKWDPSGMLLASCS 382
Query: 468 SDAFKEENVPKFKNSWFCHDNIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVXXXX 527
D + + K HD + S++ I W P + A
Sbjct: 383 DDMTLK--IWSMKQDTCVHD-LQAHSKEIYTIKWSPTGPATSNPNSSIMLA-SASFDSTV 438
Query: 528 XXXXXXXXXXXXXXXXXXXXVNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHS 587
V + +S D +++ + D + +WN GSLVHS G +
Sbjct: 439 RLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRG-T 497
Query: 588 ASSYVLDVHPFNPRIAMSAGYDGRTIVWDI 617
+ + + ++ SA DG V D+
Sbjct: 498 GGIFEVCWNARGDKVGASAS-DGSVCVLDL 526
Score = 47 (21.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 1365 MEAHD-EFFPEEWIPTSTVKSRPRST 1389
++AH E + +W PT S P S+
Sbjct: 401 LQAHSKEIYTIKWSPTGPATSNPNSS 426
Score = 47 (21.6 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWSACKSSVEDS 434
L HQ + A++ +G +GS D +W+ S+ S
Sbjct: 452 LTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHS 493
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 148 (57.2 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 42/146 (28%), Positives = 77/146 (52%)
Query: 232 KMQN-IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCL--ASCRGHEGDI 288
K+++ I +L GH+ +Y F+ G + +G D+ + +W++ C+ + +GH+G I
Sbjct: 50 KLEHPIMQLIGHKGEIYSCKFNSYGTALASGGSDKEIFLWNVYGE-CINYSVLKGHKGTI 108
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
+L S+++ + +A D I VW G I +R H+G V + + R + + S
Sbjct: 109 LELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPL--VASG 166
Query: 349 SDDGTCRIWDARYSQYSPRIYLPKPP 374
SDD + RI+D R S+ S ++ K P
Sbjct: 167 SDDRSARIFDTR-SKGSTHLFQHKYP 191
Score = 135 (52.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 42/137 (30%), Positives = 66/137 (48%)
Query: 232 KMQNIKKLRGHRDAVY-CAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
K + IK++R H V C R V +GSDDR +I+ + + H+ +T
Sbjct: 136 KGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQ-HKYPVTS 194
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGL-PISVLRGHTGAVTAIAFSPRPSAIYQLLSSS 349
+ S + + + D VIRVW + + P+ L H +T+ + S Y LLS+S
Sbjct: 195 VCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLASHQDTITSTSVSK--DGAY-LLSNS 251
Query: 350 DDGTCRIWDARYSQYSP 366
D +C+IWD R Y+P
Sbjct: 252 MDNSCKIWDIR--PYAP 266
Score = 78 (32.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 553 WSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRT 612
WS+D R + D ++ +W+ L + L GHS + + HP P IA S D +T
Sbjct: 290 WSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIA-SCSSD-KT 347
Query: 613 I 613
I
Sbjct: 348 I 348
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 1435 DEVIYSRQGHQEFIESTGSQEVGPWWSINGYISAVETCKV 1474
++ +Y+ HQ+ I ST + G + N S +CK+
Sbjct: 222 EDPLYTLASHQDTITSTSVSKDGAYLLSN---SMDNSCKI 258
Score = 39 (18.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 17/70 (24%), Positives = 29/70 (41%)
Query: 604 MSAGYDGRTIVWDIWEGTP----IRIYEIGR--FK--LVDGKFSPDGTSIVLSDDVGQIY 655
+S D +WDI P I+ + + F+ L+ +S DG I Q+Y
Sbjct: 248 LSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVY 307
Query: 656 LLNTGQGESQ 665
+ +T + Q
Sbjct: 308 IWDTNTKQLQ 317
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 142 (55.0 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ LRGH V + G+F ++GS D +++W + T GH D+ +A SS+
Sbjct: 57 RALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSD 116
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVL-RGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
N + S S D I++W +V H+ V+ + FSP S ++S D
Sbjct: 117 NRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI-IVSCGWDKLVN 175
Query: 356 IWD 358
+W+
Sbjct: 176 VWN 178
Score = 99 (39.9 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 30/83 (36%), Positives = 41/83 (49%)
Query: 282 RGHEGDITDLAV-SSNNTLVASASNDFVIRVWRLP-D----GLPISVLRGHTGAVTAIAF 335
+GH G +T L+ + L S D I +W+L D G+P LRGH+ V+ +
Sbjct: 12 KGHNGWVTQLSAHAETQRLFLSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI 71
Query: 336 SPRPSAIYQLLSSSDDGTCRIWD 358
S S LS S DGT R+WD
Sbjct: 72 S---SDGQFALSGSWDGTLRLWD 91
Score = 89 (36.4 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 31/118 (26%), Positives = 55/118 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPR----IAMSA 606
+ +S DNR +++ D I +WN + G +++ S S +V V F+P I +S
Sbjct: 111 VAFSSDNRQIVSGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVR-FSPNSSNPIIVSC 168
Query: 607 GYDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPDGTSIVLSDDVGQIYLLNTGQGE 663
G+D VW++ ++ IG ++ SPDG+ GQ L + +G+
Sbjct: 169 GWDKLVNVWNL-ANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 225
Score = 82 (33.9 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 22/86 (25%), Positives = 42/86 (48%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
N +++ D + VWN + L + GH+ + V P + + S G DG+ ++WD
Sbjct: 162 NPIIVSCGWDKLVNVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWD 220
Query: 617 IWEGTPIRIYEIGRFKLVDGK-FSPD 641
+ EG +Y + +++ FSP+
Sbjct: 221 LNEGK--HLYTLDGGDIINALCFSPN 244
Score = 48 (22.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 399 QILCCAYNANGTVFVTGSSDTFARVW 424
Q A++A+G G +D RVW
Sbjct: 285 QCTSLAWSADGQTLFAGYTDNLVRVW 310
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 26/109 (23%), Positives = 48/109 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S D + D + +W+ +G +++L G +++ F+P
Sbjct: 195 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD----IINALCFSPNRYWLCA 250
Query: 608 YDGRTI-VWDIWEGTPIRIYEIGRFKL-VDGKFSPDG-TSIVLSDDVGQ 653
G +I +WD+ EG I + E+ + + K P TS+ S D GQ
Sbjct: 251 ATGPSIKIWDL-EGKII-VDELKQEVISTSSKAEPPQCTSLAWSAD-GQ 296
Score = 44 (20.5 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 551 IVWSLDNRFVLAAIMDCRICVWNAVDGS 578
+ WS D + + A D + VW G+
Sbjct: 289 LAWSADGQTLFAGYTDNLVRVWQVTIGT 316
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 159 (61.0 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEG--DITDLAVSSNNTL 299
H V +FD + + TG D +KIW M +C + +G G + + +
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 168
Query: 300 VASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDA 359
+ S+S D+ IR+W L ++VL GH AVT++AF+ + L+SS D C +W+
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNT---LISSGRDKICMVWNL 225
Query: 360 R 360
+
Sbjct: 226 K 226
Score = 159 (61.0 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 40/141 (28%), Positives = 66/141 (46%)
Query: 223 IAKPSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCR 282
I+ P T+ +M RGH + + + + TGS DRL K+WS L
Sbjct: 474 ISGPETLHAQMTE----RGHDKDINSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFT 529
Query: 283 GHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
GH+ I + S + ++A++S D +++W L D + GH +V I F R +
Sbjct: 530 GHKRGIWCVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGT-- 587
Query: 343 YQLLSSSDDGTCRIWDARYSQ 363
QLLS DG ++W + ++
Sbjct: 588 -QLLSGGSDGLLKLWTIKTNE 607
Score = 148 (57.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 60/232 (25%), Positives = 98/232 (42%)
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSG-RFVITGSDDRLVKIWSMETAFCLASCRGHEGDIT 289
Q +Q K+L G+ D V F G ++ ++ +K++ + T+ C GH I
Sbjct: 332 QTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELSTSHCQI-LYGHTETIL 390
Query: 290 DLAVSSNNTLVASASNDFVIRVWRL-PDGLPISVLRG--HTGAVTAIAFSPRPSAIYQLL 346
L V + S + D IRVWR+ DG + V +G H V A++ S + ++
Sbjct: 391 ALDVFRKGLMFVSCAKDKSIRVWRMNKDGRVVCVAQGLGHAHGVGAVSCSRLKESF--VV 448
Query: 347 SSSDDGTCRIWDARYSQYSP-RIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAY 405
+SS D T ++W+ S S + L P+ + + I A
Sbjct: 449 TSSQDCTIKVWNIPESLTSKAKAALISGPETLHAQMTERG----------HDKDINSVAV 498
Query: 406 NANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFS 457
+ N + TGS D A++WS S+ L V +GH+ + VQFS
Sbjct: 499 SPNDKLIATGSQDRLAKLWSCPDCSL---------LGVFTGHKRGIWCVQFS 541
Score = 130 (50.8 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 33/107 (30%), Positives = 53/107 (49%)
Query: 258 VITGSDDRLVKIWSMETAFCLASCRG-HEGDITDLAVSSNNTLVASASNDFVIRVWRLPD 316
++TGS L+K W+ C+ + + H + + S +TL+A+ D I++W +
Sbjct: 82 LVTGSRALLLKQWNWRENRCVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIWDMIK 141
Query: 317 GLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARYSQ 363
L+G +G V + F P S + QL SSS D RIWD S+
Sbjct: 142 QYCTHNLKGSSGVVHLVEFHPDISRL-QLFSSSMDYKIRIWDLNSSK 187
Score = 83 (34.3 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 25/129 (19%), Positives = 58/129 (44%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
+N + S +++ + D +W+ D SL+ TGH + + P + +A S+
Sbjct: 493 INSVAVSPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQILATSSA 552
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVL--SDDVGQIYLLNTGQGESQ 665
DG +W + + + ++ +E ++ F GT ++ SD + +++ + T +
Sbjct: 553 -DGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKT 611
Query: 666 KDAKYDQFF 674
D D+ +
Sbjct: 612 LDGHEDKIW 620
Score = 48 (22.0 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 555 LDNRFVLAAIMDCRICVWN 573
L FV+ + DC I VWN
Sbjct: 442 LKESFVVTSSQDCTIKVWN 460
Score = 44 (20.5 bits), Expect = 8.5e-07, Sum P(4) = 8.5e-07
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 404 AYNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHE 440
A+ A+G ++ D VW+ K+ PI+E
Sbjct: 203 AFTADGNTLISSGRDKICMVWNL-KTRESIRTIPIYE 238
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 419 TFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQFSGCAVASRSAM 467
TF W+ + +++ I + L HE N +Q+SG A S +
Sbjct: 727 TFLVTWNTNSRNCHEAQAVI---ETLLKHEAPDNLLQYSGIKSAVESLL 772
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 15/79 (18%), Positives = 36/79 (45%)
Query: 400 ILCCAYNANGTVFVTGSSDTFARVWSA----CKSSVEDSEQPIHELDVLSGHENDVNYVQ 455
+L + + GT ++G SD ++W+ C +++ E I L + ++D+
Sbjct: 577 VLKIIFVSRGTQLLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLH--TNKQDDMVVTA 634
Query: 456 FSGCAVASRSAMSDAFKEE 474
S ++ +++ +EE
Sbjct: 635 SSDSSITLWKDVTEIEQEE 653
Score = 42 (19.8 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 917 TVLQDSHVQSKEDDRNLQNMQQQHKREEEQTIVESE 952
T DS + +D ++ + Q KREE Q + E E
Sbjct: 633 TASSDSSITLWKDVTEIEQEEAQAKREE-QIMKEQE 667
Score = 39 (18.8 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 1141 GSDALLDLASVRKEELAR----HED 1161
GSD LL L +++ E + HED
Sbjct: 593 GSDGLLKLWTIKTNECVKTLDGHED 617
Score = 39 (18.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 13/61 (21%), Positives = 26/61 (42%)
Query: 560 VLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW-DIW 618
+L+ D + +W V +L GH + L + + + ++A D +W D+
Sbjct: 589 LLSGGSDGLLKLWTIKTNECVKTLDGHEDKIWGLHTNKQDDMV-VTASSDSSITLWKDVT 647
Query: 619 E 619
E
Sbjct: 648 E 648
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 183 (69.5 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 43/120 (35%), Positives = 59/120 (49%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNT 298
L GH V F GR + +GS D+ V++W T + RGH + +A S +
Sbjct: 733 LEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGR 792
Query: 299 LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWD 358
L+AS S D +R+W G LRGH+ V ++AFSP L S S D T R+WD
Sbjct: 793 LLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRL---LASGSFDKTVRLWD 849
Score = 165 (63.1 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 41/123 (33%), Positives = 61/123 (49%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSS 295
++ L GH ++V+ + +GSDD V++W T + GH G + +A S
Sbjct: 696 LQTLEGHSNSVWAVL--------ASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSP 747
Query: 296 NNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCR 355
+ L+AS S D +R+W G LRGH+ V ++AFSP L S S D T R
Sbjct: 748 DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRL---LASGSFDKTVR 804
Query: 356 IWD 358
+WD
Sbjct: 805 LWD 807
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 157 (60.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G F+++ D+ IW T H D+
Sbjct: 257 NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
SNNT AS S D I V +L PI +GHT V AI + P + L S SDD T
Sbjct: 317 QSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNL---LASCSDDMT 372
Query: 354 CRIWDAR 360
+IW +
Sbjct: 373 LKIWSMK 379
Score = 155 (59.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS- 294
IK +GH + V +D +G + + SDD +KIWSM+ C+ + H +I + S
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 295 ----SNNT----LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+NN ++ASAS D +R+W + G+ I L H V ++AFSP Y L
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP--DGRY-LA 458
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 459 SGSFDKCVHIWNTQ 472
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 41/135 (30%), Positives = 61/135 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASCRGHEG----- 286
LRGH V+ ++ + +GS D +IW++ T L C G
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 287 --DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFI-- 281
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 282 -LSAGVDKTTIIWDA 295
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
S D + + + + + +GH ++ + L+AS S+D +++W + +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 322 VLRGHTGAVTAIAFSP------RPSAIYQLLSSSDDGTCRIWD 358
L+ H + I +SP P+A L S+S D T R+WD
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/123 (23%), Positives = 47/123 (38%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-----NPRI 602
VN I W + + D + +W+ + VH L H+ Y + P NP
Sbjct: 352 VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 411
Query: 603 AM---SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
+ SA +D +WD+ G I + + FSPDG + +++ NT
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 660 GQG 662
G
Sbjct: 472 QTG 474
Score = 73 (30.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D R++ + D + +WN G+LVHS G + + + + ++ SA
Sbjct: 445 VYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 503
Query: 608 YDGRTIVWDI 617
DG V D+
Sbjct: 504 -DGSVCVLDL 512
Score = 44 (20.5 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
L HQ + A++ +G +GS D +W+
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 42 (19.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF--SGCAVA 462
+ +N T F + S+D V CK ++PI GH N+VN +++ +G +A
Sbjct: 316 WQSNNT-FASCSTDMCIHV---CKLG---QDRPIK---TFQGHTNEVNAIKWDPTGNLLA 365
Query: 463 SRS 465
S S
Sbjct: 366 SCS 368
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 157 (60.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G F+++ D+ IW T H D+
Sbjct: 257 NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
SNNT AS S D I V +L PI +GHT V AI + P + L S SDD T
Sbjct: 317 QSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNL---LASCSDDMT 372
Query: 354 CRIWDAR 360
+IW +
Sbjct: 373 LKIWSMK 379
Score = 155 (59.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS- 294
IK +GH + V +D +G + + SDD +KIWSM+ C+ + H +I + S
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 295 ----SNNT----LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+NN ++ASAS D +R+W + G+ I L H V ++AFSP Y L
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP--DGRY-LA 458
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 459 SGSFDKCVHIWNTQ 472
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 41/135 (30%), Positives = 61/135 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASCRGHEG----- 286
LRGH V+ ++ + +GS D +IW++ T L C G
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 287 --DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFI-- 281
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 282 -LSAGVDKTTIIWDA 295
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
S D + + + + + +GH ++ + L+AS S+D +++W + +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 322 VLRGHTGAVTAIAFSP------RPSAIYQLLSSSDDGTCRIWD 358
L+ H + I +SP P+A L S+S D T R+WD
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/123 (23%), Positives = 47/123 (38%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-----NPRI 602
VN I W + + D + +W+ + VH L H+ Y + P NP
Sbjct: 352 VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 411
Query: 603 AM---SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
+ SA +D +WD+ G I + + FSPDG + +++ NT
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 660 GQG 662
G
Sbjct: 472 QTG 474
Score = 73 (30.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D R++ + D + +WN G+LVHS G + + + + ++ SA
Sbjct: 445 VYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 503
Query: 608 YDGRTIVWDI 617
DG V D+
Sbjct: 504 -DGSVCVLDL 512
Score = 44 (20.5 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
L HQ + A++ +G +GS D +W+
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 42 (19.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF--SGCAVA 462
+ +N T F + S+D V CK ++PI GH N+VN +++ +G +A
Sbjct: 316 WQSNNT-FASCSTDMCIHV---CKLG---QDRPIK---TFQGHTNEVNAIKWDPTGNLLA 365
Query: 463 SRS 465
S S
Sbjct: 366 SCS 368
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 157 (60.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G F+++ D+ IW T H D+
Sbjct: 257 NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
SNNT AS S D I V +L PI +GHT V AI + P + L S SDD T
Sbjct: 317 QSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNL---LASCSDDMT 372
Query: 354 CRIWDAR 360
+IW +
Sbjct: 373 LKIWSMK 379
Score = 155 (59.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS- 294
IK +GH + V +D +G + + SDD +KIWSM+ C+ + H +I + S
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 295 ----SNNT----LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+NN ++ASAS D +R+W + G+ I L H V ++AFSP Y L
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP--DGRY-LA 458
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 459 SGSFDKCVHIWNTQ 472
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 41/135 (30%), Positives = 61/135 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASCRGHEG----- 286
LRGH V+ ++ + +GS D +IW++ T L C G
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 287 --DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFI-- 281
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 282 -LSAGVDKTTIIWDA 295
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
S D + + + + + +GH ++ + L+AS S+D +++W + +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 322 VLRGHTGAVTAIAFSP------RPSAIYQLLSSSDDGTCRIWD 358
L+ H + I +SP P+A L S+S D T R+WD
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/123 (23%), Positives = 47/123 (38%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-----NPRI 602
VN I W + + D + +W+ + VH L H+ Y + P NP
Sbjct: 352 VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 411
Query: 603 AM---SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
+ SA +D +WD+ G I + + FSPDG + +++ NT
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 660 GQG 662
G
Sbjct: 472 QTG 474
Score = 73 (30.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D R++ + D + +WN G+LVHS G + + + + ++ SA
Sbjct: 445 VYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 503
Query: 608 YDGRTIVWDI 617
DG V D+
Sbjct: 504 -DGSVCVLDL 512
Score = 44 (20.5 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
L HQ + A++ +G +GS D +W+
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 42 (19.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF--SGCAVA 462
+ +N T F + S+D V CK ++PI GH N+VN +++ +G +A
Sbjct: 316 WQSNNT-FASCSTDMCIHV---CKLG---QDRPIK---TFQGHTNEVNAIKWDPTGNLLA 365
Query: 463 SRS 465
S S
Sbjct: 366 SCS 368
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 157 (60.3 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G F+++ D+ IW T H D+
Sbjct: 257 NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
SNNT AS S D I V +L PI +GHT V AI + P + L S SDD T
Sbjct: 317 QSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNL---LASCSDDMT 372
Query: 354 CRIWDAR 360
+IW +
Sbjct: 373 LKIWSMK 379
Score = 155 (59.6 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 44/134 (32%), Positives = 67/134 (50%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS- 294
IK +GH + V +D +G + + SDD +KIWSM+ C+ + H +I + S
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSP 401
Query: 295 ----SNNT----LVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLL 346
+NN ++ASAS D +R+W + G+ I L H V ++AFSP Y L
Sbjct: 402 TGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP--DGRY-LA 458
Query: 347 SSSDDGTCRIWDAR 360
S S D IW+ +
Sbjct: 459 SGSFDKCVHIWNTQ 472
Score = 126 (49.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 41/135 (30%), Positives = 61/135 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASCRGHEG----- 286
LRGH V+ ++ + +GS D +IW++ T L C G
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGPTQLVLRHCIREGGQDVPS 224
Query: 287 --DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFI-- 281
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 282 -LSAGVDKTTIIWDA 295
Score = 107 (42.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 262 SDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVASASNDFVIRVWRLPDGLPIS 321
S D + + + + + +GH ++ + L+AS S+D +++W + +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 322 VLRGHTGAVTAIAFSP------RPSAIYQLLSSSDDGTCRIWD 358
L+ H + I +SP P+A L S+S D T R+WD
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWD 428
Score = 95 (38.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 29/123 (23%), Positives = 47/123 (38%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-----NPRI 602
VN I W + + D + +W+ + VH L H+ Y + P NP
Sbjct: 352 VNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 411
Query: 603 AM---SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNT 659
+ SA +D +WD+ G I + + FSPDG + +++ NT
Sbjct: 412 NLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNT 471
Query: 660 GQG 662
G
Sbjct: 472 QTG 474
Score = 73 (30.8 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D R++ + D + +WN G+LVHS G + + + + ++ SA
Sbjct: 445 VYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 503
Query: 608 YDGRTIVWDI 617
DG V D+
Sbjct: 504 -DGSVCVLDL 512
Score = 44 (20.5 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 395 LQSHQ--ILCCAYNANGTVFVTGSSDTFARVWS 425
L HQ + A++ +G +GS D +W+
Sbjct: 438 LTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWN 470
Score = 42 (19.8 bits), Expect = 3.8e-06, Sum P(3) = 3.8e-06
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 405 YNANGTVFVTGSSDTFARVWSACKSSVEDSEQPIHELDVLSGHENDVNYVQF--SGCAVA 462
+ +N T F + S+D V CK ++PI GH N+VN +++ +G +A
Sbjct: 316 WQSNNT-FASCSTDMCIHV---CKLG---QDRPIK---TFQGHTNEVNAIKWDPTGNLLA 365
Query: 463 SRS 465
S S
Sbjct: 366 SCS 368
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 186 (70.5 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 47/136 (34%), Positives = 68/136 (50%)
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
P+ + K + L HRDAV C F + +GS+D +KIW E + +GH
Sbjct: 97 PTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHI 156
Query: 286 GDIT--DLAVSSNNTLVASASNDFVIRVWR-LPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
++ D NTL+AS S+D I++W D I L GH +V+++ F S
Sbjct: 157 RGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLT--SND 214
Query: 343 YQLLSSSDDGTCRIWD 358
L+S+S DGT RIWD
Sbjct: 215 NHLISASRDGTLRIWD 230
Score = 40 (19.1 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 554 SLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
S D +++++ D I VW +L GH
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVSSAEPKAALLGH 286
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 186 (70.5 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 47/136 (34%), Positives = 68/136 (50%)
Query: 226 PSTMVQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHE 285
P+ + K + L HRDAV C F + +GS+D +KIW E + +GH
Sbjct: 97 PTNWLPKPSSTHTLTSHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHI 156
Query: 286 GDIT--DLAVSSNNTLVASASNDFVIRVWR-LPDGLPISVLRGHTGAVTAIAFSPRPSAI 342
++ D NTL+AS S+D I++W D I L GH +V+++ F S
Sbjct: 157 RGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLT--SND 214
Query: 343 YQLLSSSDDGTCRIWD 358
L+S+S DGT RIWD
Sbjct: 215 NHLISASRDGTLRIWD 230
Score = 40 (19.1 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 554 SLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGH 586
S D +++++ D I VW +L GH
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVSSAEPKAALLGH 286
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 157 (60.3 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 235 NIKKLRG-HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAV 293
N+ G H+ ++ +++ G F+++ D+ IW T H D+
Sbjct: 257 NLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDW 316
Query: 294 SSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
SNNT AS S D I V +L PI +GHT V AI + P + L S SDD T
Sbjct: 317 QSNNTF-ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNL---LASCSDDMT 372
Query: 354 CRIWDAR 360
+IW +
Sbjct: 373 LKIWSMK 379
Score = 143 (55.4 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 44/137 (32%), Positives = 67/137 (48%)
Query: 236 IKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVS- 294
IK +GH + V +D +G + + SDD +KIWSM+ C+ + H +I + S
Sbjct: 342 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSP 401
Query: 295 ----SNNT----LVAS---ASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIY 343
+NN ++AS AS D +R+W + G+ I L H V ++AFSP Y
Sbjct: 402 TGPGTNNPNANLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSP--DGRY 459
Query: 344 QLLSSSDDGTCRIWDAR 360
L S S D IW+ +
Sbjct: 460 -LASGSFDKCVHIWNTQ 475
Score = 126 (49.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 41/135 (30%), Positives = 61/135 (45%)
Query: 239 LRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSME-------TAFCLASCRGHEG----- 286
LRGH V+ ++ + +GS D +IW++ T L C G
Sbjct: 165 LRGHESEVFICAWNPVSDLLASGSGDSTARIWNLSENSTSGSTQLVLRHCIREGGQDVPS 224
Query: 287 --DITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQ 344
D+T L +S TL+A+ S D R+W DG S L H G + A+ ++ + + I
Sbjct: 225 NKDVTSLDWNSEGTLLATGSYDGFARIWT-KDGNLASTLGQHKGPIFALKWNKKGNFI-- 281
Query: 345 LLSSSDDGTCRIWDA 359
LS+ D T IWDA
Sbjct: 282 -LSAGVDKTTIIWDA 295
Score = 92 (37.4 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 30/126 (23%), Positives = 47/126 (37%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPF-----NPRI 602
VN I W + + D + +W+ S VH L H+ Y + P NP
Sbjct: 352 VNAIKWDPTGNLLASCSDDMTLKIWSMKQDSCVHDLQAHNKEIYTIKWSPTGPGTNNPNA 411
Query: 603 AM------SAGYDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYL 656
+ SA +D +WD+ G I + + FSPDG + +++
Sbjct: 412 NLMLASLDSASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHI 471
Query: 657 LNTGQG 662
NT G
Sbjct: 472 WNTQTG 477
Score = 73 (30.8 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V + +S D R++ + D + +WN G+LVHS G + + + + ++ SA
Sbjct: 448 VYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSYRG-TGGIFEVCWNAAGDKVGASAS 506
Query: 608 YDGRTIVWDI 617
DG V D+
Sbjct: 507 -DGSVCVLDL 515
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 166 (63.5 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 50/185 (27%), Positives = 80/185 (43%)
Query: 242 HRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVA 301
H+D V C F + +++GS D VKIW +++ C + H G + + +S + +L A
Sbjct: 155 HQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCA 214
Query: 302 SASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSDDGTCRIWDARY 361
S D +W L G P+ L + A+AFSP Y L +++DD IWD
Sbjct: 215 SGGKDTFACLWELSSGKPLYKLEARN-TINALAFSPNK---YWLSAATDDKII-IWDLLT 269
Query: 362 SQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANGTVFVTGSSDTFA 421
Q I A K ++ L A++A+G+V G +D
Sbjct: 270 KQVLAEIVPEVKEQAFDSKKKKESKP--------KAPACLSLAWSADGSVLYAGYNDGLI 321
Query: 422 RVWSA 426
RV+ +
Sbjct: 322 RVYKS 326
Score = 157 (60.3 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 38/127 (29%), Positives = 59/127 (46%)
Query: 237 KKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSN 296
+ L+GH V + G+F ++GS D +++W + +GH D+ +A SS+
Sbjct: 64 RSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSD 123
Query: 297 NTLVASASNDFVIRVWRLPDGLPISVLRG---HTGAVTAIAFSPRPSAIYQLLSSSDDGT 353
N + S S D I+VW + L G H V+ I FSP I +S S D
Sbjct: 124 NRQIISGSRDATIKVWNTLGECKFT-LEGPEAHQDWVSCIRFSPNTPTI---VSGSWDNK 179
Query: 354 CRIWDAR 360
+IWD +
Sbjct: 180 VKIWDIK 186
Score = 137 (53.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 35/130 (26%), Positives = 62/130 (47%)
Query: 236 IKKLRGHRDAVYC-AIFDRSGRFVITGSDDRLVKIWSMETAFCLA------SCRGHEGDI 288
+ L GH V A+ + +I+ S D+ V +W + + S +GH +
Sbjct: 14 VGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFV 73
Query: 289 TDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSS 348
D+ +S + S S D +R+W + G+ + +GHT V ++AFS S Q++S
Sbjct: 74 QDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFS---SDNRQIISG 130
Query: 349 SDDGTCRIWD 358
S D T ++W+
Sbjct: 131 SRDATIKVWN 140
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 33/131 (25%), Positives = 54/131 (41%)
Query: 230 VQKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSM--ETAFCLASCRGHEGD 287
+ K + + +GH V F R +I+GS D +K+W+ E F L H+
Sbjct: 99 ITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDW 158
Query: 288 ITDLAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLS 347
++ + S N + S S D +++W + L HTG V + SP S
Sbjct: 159 VSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCAS--G 216
Query: 348 SSDDGTCRIWD 358
D C +W+
Sbjct: 217 GKDTFAC-LWE 226
Score = 74 (31.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 20/95 (21%), Positives = 45/95 (47%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAG 607
V+ I +S + +++ D ++ +W+ H+LT H+ + + P + + S G
Sbjct: 159 VSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISP-DGSLCASGG 217
Query: 608 YDGRTIVWDIWEGTPIRIYEIGRFKLVDG-KFSPD 641
D +W++ G P+ Y++ ++ FSP+
Sbjct: 218 KDTFACLWELSSGKPL--YKLEARNTINALAFSPN 250
Score = 65 (27.9 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 17/71 (23%), Positives = 31/71 (43%)
Query: 548 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNP-RIAMSA 606
VN + S D + D C+W G ++ L + ++ F+P + +SA
Sbjct: 201 VNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNT----INALAFSPNKYWLSA 256
Query: 607 GYDGRTIVWDI 617
D + I+WD+
Sbjct: 257 ATDDKIIIWDL 267
>UNIPROTKB|G4MWF1 [details] [associations]
symbol:MGG_08345 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 EMBL:CM001232
KO:K03361 RefSeq:XP_003715718.1 EnsemblFungi:MGG_08345T0
GeneID:2678612 KEGG:mgr:MGG_08345 Uniprot:G4MWF1
Length = 1033
Score = 174 (66.3 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 55/188 (29%), Positives = 87/188 (46%)
Query: 172 SMKYKQVKPLPAYLRWPH-MQADQVHGLSLREIGGGFKKHHRAPSVCSACYAIAKPSTMV 230
S +Y Q P P+ ++ Q H S+R I H A ++ S Y + +
Sbjct: 784 SRRYIQTGPPANDAECPYFLRILQGHTHSVRAISA-----H-ADTLVSGSYDCSVRVWRI 837
Query: 231 QKMQNIKKLRGHRDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITD 290
+ + L+GH VY + D I+GS D LVKIW +ET CL + GH +
Sbjct: 838 STGEQLHWLQGHSQKVYSVVLDHKRNRCISGSMDSLVKIWDLETGACLYTLEGHSL-LVG 896
Query: 291 LAVSSNNTLVASASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAFSPRPSAIYQLLSSSD 350
L + LV++A+ D +R+W +G S+L HT A+T R +++S S+
Sbjct: 897 LLDLRDERLVSAAA-DSTLRIWDPENGKCKSILTAHTAAITCFQHDSR-----KVISGSE 950
Query: 351 DGTCRIWD 358
T ++WD
Sbjct: 951 K-TVKMWD 957
Score = 157 (60.3 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 60/195 (30%), Positives = 79/195 (40%)
Query: 243 RDAVYCAIFDRSGRFVITGSDDRLVKIWSMETAFCLASCRGHEGDITDLAVSSNNTLVAS 302
R + C FD +ITGSDD+L+ ++ T GHEG + L N TLV S
Sbjct: 654 RHVITCLQFDEDK--IITGSDDQLIHVYDTNTGKLRQKLEGHEGGVWALQYEGN-TLV-S 709
Query: 303 ASNDFVIRVWRLPDGLPISVLRGHTGAVTAIAF-SP---------RP--SAIYQLL-SSS 349
S D +RVW + GL V GHT V + P RP S L+ + S
Sbjct: 710 GSTDRSVRVWDIEKGLCTQVFYGHTSTVRCLQILMPTEVGSDTEGRPIMSPPKPLIITGS 769
Query: 350 DDGTCRIWDARYSQYSPRIYLPKPPDAITGKXXXXXXXXXXXXXXLQSHQILCCAYNANG 409
D R+W R + R Y+ P A + LQ H A +A+
Sbjct: 770 RDSQLRVW--RLPEAGSRRYIQTGPPANDAECPYFLRI-------LQGHTHSVRAISAHA 820
Query: 410 TVFVTGSSDTFARVW 424
V+GS D RVW
Sbjct: 821 DTLVSGSYDCSVRVW 835
Score = 81 (33.6 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 26/71 (36%), Positives = 31/71 (43%)
Query: 566 DCRICVWNAVDGSLVHSLTGHSASSY--VLDVHPFNPRIAMSAGYDGRTIVWDIWEGTPI 623
DC + VW G +H L GHS Y VLD H N I S D +WD+ G +
Sbjct: 829 DCSVRVWRISTGEQLHWLQGHSQKVYSVVLD-HKRNRCI--SGSMDSLVKIWDLETGACL 885
Query: 624 RIYEIGRFKLV 634
E G LV
Sbjct: 886 YTLE-GHSLLV 895
Score = 71 (30.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 557 NRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVWD 616
NR + + MD + +W+ G+ +++L GHS +LD+ + R+ +SA D +WD
Sbjct: 863 NRCISGS-MDSLVKIWDLETGACLYTLEGHSLLVGLLDLR--DERL-VSAAADSTLRIWD 918
Score = 56 (24.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 19/65 (29%), Positives = 30/65 (46%)
Query: 556 DNRFVLAAIMDCRICVWNAVDGSLVHSLTGHSASSYVLDVHPFNPRIAMSAGYDGRTIVW 615
D R V AA D + +W+ +G LT H+A+ + + R +S G + +W
Sbjct: 902 DERLVSAAA-DSTLRIWDPENGKCKSILTAHTAA---ITCFQHDSRKVIS-GSEKTVKMW 956
Query: 616 DIWEG 620
DI G
Sbjct: 957 DIATG 961
WARNING: HSPs involving 633 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.396 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1715 1603 0.00083 125 3 11 22 0.43 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 883
No. of states in DFA: 637 (68 KB)
Total size of DFA: 731 KB (2312 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 157.61u 0.13s 157.74t Elapsed: 00:00:07
Total cpu time: 157.73u 0.14s 157.87t Elapsed: 00:00:07
Start: Tue May 21 04:26:49 2013 End: Tue May 21 04:26:56 2013
WARNINGS ISSUED: 2