Query 048803
Match_columns 289
No_of_seqs 176 out of 2138
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 23:42:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048803.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048803hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 100.0 1E-34 3.6E-39 242.3 25.1 187 81-279 67-254 (315)
2 3ii7_A Kelch-like protein 7; p 100.0 1.5E-34 5.3E-39 240.3 21.2 228 25-278 27-257 (306)
3 1zgk_A Kelch-like ECH-associat 100.0 2.2E-34 7.6E-39 239.6 21.4 233 23-278 40-272 (308)
4 2xn4_A Kelch-like protein 2; s 100.0 1.7E-34 5.9E-39 239.5 20.5 228 25-278 33-261 (302)
5 2woz_A Kelch repeat and BTB do 100.0 1.2E-33 4.1E-38 236.2 25.0 187 81-279 78-264 (318)
6 3ii7_A Kelch-like protein 7; p 100.0 4.9E-33 1.7E-37 231.2 25.7 186 81-278 24-210 (306)
7 1zgk_A Kelch-like ECH-associat 100.0 5.5E-33 1.9E-37 231.1 24.6 214 39-278 10-225 (308)
8 2vpj_A Kelch-like protein 12; 100.0 2E-33 6.7E-38 233.0 21.2 228 24-278 33-263 (301)
9 2xn4_A Kelch-like protein 2; s 100.0 1.1E-32 3.9E-37 228.6 24.0 185 81-278 30-214 (302)
10 2vpj_A Kelch-like protein 12; 100.0 9.2E-32 3.2E-36 223.0 24.3 183 81-278 31-216 (301)
11 4asc_A Kelch repeat and BTB do 100.0 1.5E-31 5.1E-36 223.2 23.2 187 82-278 14-206 (315)
12 2uvk_A YJHT; unknown function, 100.0 6.8E-31 2.3E-35 222.9 23.1 202 54-278 19-262 (357)
13 2woz_A Kelch repeat and BTB do 100.0 4.5E-32 1.6E-36 226.6 15.1 228 25-275 81-314 (318)
14 2uvk_A YJHT; unknown function, 100.0 1.9E-31 6.7E-36 226.2 16.7 233 31-278 42-326 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 3.4E-29 1.2E-33 228.9 24.1 185 81-278 412-617 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 2.7E-28 9.2E-33 223.0 16.3 230 29-278 419-675 (695)
17 1k3i_A Galactose oxidase precu 99.9 2.4E-25 8.2E-30 203.0 16.2 233 31-278 175-476 (656)
18 1k3i_A Galactose oxidase precu 99.9 3.7E-25 1.3E-29 201.8 15.5 228 27-277 224-530 (656)
19 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 7.7E-11 2.6E-15 70.1 3.4 43 3-45 8-50 (53)
20 1p22_A F-BOX/WD-repeat protein 99.0 1E-08 3.5E-13 88.6 16.4 44 2-45 9-56 (435)
21 3v7d_B Cell division control p 99.0 6.5E-09 2.2E-13 90.4 14.9 43 2-44 13-56 (464)
22 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.5E-08 5.3E-13 87.6 16.7 46 1-46 16-61 (445)
23 2e31_A FBS1, F-box only protei 98.9 9.6E-10 3.3E-14 88.6 3.5 49 2-50 49-98 (297)
24 3l2o_B F-box only protein 4; s 98.0 2.4E-06 8.2E-11 68.2 2.0 45 4-48 5-49 (312)
25 3dsm_A Uncharacterized protein 97.7 0.0048 1.6E-07 50.8 17.5 166 81-276 17-190 (328)
26 3mbr_X Glutamine cyclotransfer 97.6 0.0031 1.1E-07 49.4 14.3 112 111-246 25-136 (243)
27 3dsm_A Uncharacterized protein 97.6 0.0093 3.2E-07 49.1 17.9 171 81-275 105-285 (328)
28 3q7m_A Lipoprotein YFGL, BAMB; 97.4 0.025 8.6E-07 47.2 18.9 156 81-276 113-285 (376)
29 2ast_B S-phase kinase-associat 97.3 5.7E-05 1.9E-09 62.6 1.5 42 2-43 7-48 (336)
30 1q7f_A NHL, brain tumor CG1071 97.1 0.072 2.5E-06 42.4 19.2 172 81-277 51-226 (286)
31 2p1m_B Transport inhibitor res 97.1 0.0002 6.7E-09 64.2 2.6 36 2-37 4-40 (594)
32 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.1 3.6E-06 43.4 19.5 140 81-249 63-215 (376)
33 3nol_A Glutamine cyclotransfer 97.0 0.0031 1.1E-07 50.0 8.5 111 111-245 47-157 (262)
34 3jrp_A Fusion protein of prote 97.0 0.0088 3E-07 49.5 11.7 97 81-194 33-135 (379)
35 3nok_A Glutaminyl cyclase; bet 97.0 0.017 5.7E-07 45.9 12.2 108 111-245 59-166 (268)
36 3mbr_X Glutamine cyclotransfer 96.9 0.022 7.7E-07 44.6 12.7 104 160-281 24-127 (243)
37 3fm0_A Protein CIAO1; WDR39,SG 96.7 0.013 4.3E-07 48.5 10.7 173 81-278 38-215 (345)
38 1k8k_C P40, ARP2/3 complex 41 96.7 0.027 9.4E-07 46.4 12.7 138 81-242 30-172 (372)
39 4e54_B DNA damage-binding prot 96.7 0.033 1.1E-06 47.6 13.4 138 81-245 142-284 (435)
40 2z2n_A Virginiamycin B lyase; 96.7 0.13 4.3E-06 40.9 16.2 162 81-276 120-284 (299)
41 1q7f_A NHL, brain tumor CG1071 96.7 0.11 3.6E-06 41.4 15.4 138 116-276 131-269 (286)
42 3nol_A Glutamine cyclotransfer 96.7 0.011 3.9E-07 46.7 9.1 111 152-280 37-148 (262)
43 1rwi_B Serine/threonine-protei 96.6 0.15 5.1E-06 39.9 16.0 162 81-276 46-210 (270)
44 3hfq_A Uncharacterized protein 96.6 0.02 6.8E-07 47.1 10.8 174 81-276 18-206 (347)
45 1k8k_C P40, ARP2/3 complex 41 96.6 0.011 3.8E-07 48.8 9.4 141 116-278 19-163 (372)
46 2qc5_A Streptogramin B lactona 96.5 0.15 5.1E-06 40.5 15.2 161 81-275 83-247 (300)
47 2iwa_A Glutamine cyclotransfer 96.5 0.066 2.2E-06 42.6 12.6 111 111-245 25-137 (266)
48 2z2n_A Virginiamycin B lyase; 96.5 0.15 5.1E-06 40.4 15.1 162 81-275 36-200 (299)
49 3jrp_A Fusion protein of prote 96.4 0.027 9.4E-07 46.5 10.8 138 81-245 79-242 (379)
50 1gxr_A ESG1, transducin-like e 96.3 0.063 2.1E-06 43.4 12.3 107 116-245 108-216 (337)
51 4ery_A WD repeat-containing pr 96.3 0.31 1.1E-05 39.1 16.5 137 81-245 87-225 (312)
52 3jro_A Fusion protein of prote 96.3 0.026 8.9E-07 52.1 10.7 98 81-194 31-133 (753)
53 3dwl_C Actin-related protein 2 96.3 0.0064 2.2E-07 50.6 6.1 141 116-278 22-167 (377)
54 1rwi_B Serine/threonine-protei 96.3 0.1 3.5E-06 40.9 12.9 164 81-278 87-254 (270)
55 3ogk_B Coronatine-insensitive 96.2 0.0012 4.3E-08 59.0 1.5 34 5-38 14-48 (592)
56 3dwl_C Actin-related protein 2 96.2 0.0076 2.6E-07 50.2 6.3 140 81-244 33-178 (377)
57 2qc5_A Streptogramin B lactona 96.2 0.25 8.5E-06 39.2 14.8 161 81-275 41-205 (300)
58 2ovr_B FBW7, F-BOX/WD repeat p 96.1 0.23 7.9E-06 42.2 15.3 164 81-279 219-382 (445)
59 1p22_A F-BOX/WD-repeat protein 96.1 0.073 2.5E-06 45.3 11.7 163 81-279 193-356 (435)
60 4ery_A WD repeat-containing pr 96.0 0.2 6.9E-06 40.2 13.9 135 81-246 45-183 (312)
61 3vgz_A Uncharacterized protein 96.0 0.49 1.7E-05 38.4 16.3 138 81-247 164-307 (353)
62 2iwa_A Glutamine cyclotransfer 96.0 0.11 3.7E-06 41.4 11.5 104 160-279 24-127 (266)
63 3ei3_B DNA damage-binding prot 96.0 0.18 6.2E-06 41.8 13.5 136 81-243 96-236 (383)
64 1gxr_A ESG1, transducin-like e 96.0 0.22 7.5E-06 40.1 13.8 166 81-278 119-286 (337)
65 1l0q_A Surface layer protein; 95.9 0.059 2E-06 44.9 10.5 135 81-247 54-193 (391)
66 3ow8_A WD repeat-containing pr 95.9 0.39 1.3E-05 39.0 15.1 136 81-246 102-240 (321)
67 4a2l_A BT_4663, two-component 95.8 0.54 1.9E-05 43.5 17.1 166 82-278 428-606 (795)
68 3ow8_A WD repeat-containing pr 95.8 0.36 1.2E-05 39.2 14.4 133 116-279 175-312 (321)
69 2hqs_A Protein TOLB; TOLB, PAL 95.8 0.54 1.8E-05 39.8 15.8 147 81-251 203-352 (415)
70 3jro_A Fusion protein of prote 95.7 0.12 4.2E-06 47.6 12.4 174 81-279 77-276 (753)
71 2hes_X YDR267CP; beta-propelle 95.7 0.11 3.7E-06 42.5 10.9 143 116-279 164-319 (330)
72 3vgz_A Uncharacterized protein 95.7 0.61 2.1E-05 37.8 15.5 140 81-246 69-218 (353)
73 3bws_A Protein LP49; two-domai 95.6 0.14 4.8E-06 43.2 11.6 141 82-247 102-247 (433)
74 3bg1_A Protein SEC13 homolog; 95.6 0.085 2.9E-06 42.8 9.7 102 81-198 35-142 (316)
75 1l0q_A Surface layer protein; 95.5 0.082 2.8E-06 44.0 9.8 136 81-248 12-152 (391)
76 3v9f_A Two-component system se 95.5 1.5 5E-05 40.5 18.8 166 81-277 427-602 (781)
77 3nok_A Glutaminyl cyclase; bet 95.5 0.092 3.1E-06 41.6 9.1 101 160-281 58-158 (268)
78 1kb0_A Quinohemoprotein alcoho 95.5 1.4 4.9E-05 40.0 21.0 109 81-198 87-206 (677)
79 2pm7_B Protein transport prote 95.5 0.33 1.1E-05 38.8 12.8 65 117-194 67-133 (297)
80 3no2_A Uncharacterized protein 95.3 0.54 1.8E-05 37.4 13.4 166 81-275 56-230 (276)
81 2ad6_A Methanol dehydrogenase 95.2 1.5 5.2E-05 38.9 19.0 107 81-198 73-192 (571)
82 4h5i_A Guanine nucleotide-exch 95.2 0.77 2.6E-05 38.0 14.7 173 81-279 157-334 (365)
83 1got_B GT-beta; complex (GTP-b 95.2 1 3.5E-05 36.7 15.8 125 134-278 164-291 (340)
84 3v9f_A Two-component system se 95.2 0.64 2.2E-05 43.0 15.2 166 83-276 385-557 (781)
85 1got_B GT-beta; complex (GTP-b 95.2 0.76 2.6E-05 37.5 14.3 166 81-279 164-334 (340)
86 1r5m_A SIR4-interacting protei 95.1 0.35 1.2E-05 40.3 12.4 132 117-278 217-351 (425)
87 3fm0_A Protein CIAO1; WDR39,SG 95.1 0.11 3.8E-06 42.7 8.9 108 116-244 27-137 (345)
88 2pbi_B Guanine nucleotide-bind 95.0 1.2 4.1E-05 36.6 16.8 168 81-279 176-348 (354)
89 2dg1_A DRP35, lactonase; beta 94.9 0.26 8.9E-06 40.0 10.8 144 81-243 66-213 (333)
90 1ri6_A Putative isomerase YBHE 94.9 1.2 4E-05 35.8 15.2 149 81-252 151-319 (343)
91 4gqb_B Methylosome protein 50; 94.9 0.37 1.3E-05 39.7 11.7 139 81-245 103-248 (344)
92 4g56_B MGC81050 protein; prote 94.9 0.23 7.9E-06 41.1 10.5 107 116-245 150-260 (357)
93 3vl1_A 26S proteasome regulato 94.9 1.5 5E-05 36.6 16.7 93 167-279 258-356 (420)
94 2pm9_A Protein WEB1, protein t 94.8 1.5 5E-05 36.5 16.0 141 117-279 178-328 (416)
95 2fp8_A Strictosidine synthase; 94.8 0.78 2.7E-05 37.1 13.3 179 82-276 102-301 (322)
96 1jmx_B Amine dehydrogenase; ox 94.8 0.59 2E-05 37.8 12.7 70 114-197 8-78 (349)
97 2aq5_A Coronin-1A; WD40 repeat 94.8 1 3.6E-05 37.5 14.4 109 118-245 145-256 (402)
98 4a2l_A BT_4663, two-component 94.7 1.7 5.7E-05 40.3 16.7 140 82-251 472-622 (795)
99 3no2_A Uncharacterized protein 94.7 0.68 2.3E-05 36.8 12.3 160 81-277 15-184 (276)
100 4aez_A CDC20, WD repeat-contai 94.7 0.68 2.3E-05 38.7 13.0 138 116-279 228-371 (401)
101 3e5z_A Putative gluconolactona 94.6 1.1 3.8E-05 35.5 13.7 169 81-276 50-236 (296)
102 3iz6_a 40S ribosomal protein R 94.6 1.6 5.6E-05 36.1 17.2 173 81-279 180-366 (380)
103 3v7d_B Cell division control p 94.5 1.3 4.6E-05 37.6 14.8 134 115-277 278-411 (464)
104 2aq5_A Coronin-1A; WD40 repeat 94.5 1.4 4.9E-05 36.7 14.7 138 116-275 93-238 (402)
105 1kv9_A Type II quinohemoprotei 94.5 2.4 8.3E-05 38.4 17.0 109 81-198 76-194 (668)
106 3vl1_A 26S proteasome regulato 94.5 1.2 4.3E-05 37.0 14.3 94 81-195 119-214 (420)
107 2pm7_B Protein transport prote 94.4 0.88 3E-05 36.3 12.7 98 168-279 170-276 (297)
108 3mkq_A Coatomer beta'-subunit; 94.4 0.59 2E-05 43.0 13.0 135 81-245 35-174 (814)
109 3bg1_A Protein SEC13 homolog; 94.4 0.84 2.9E-05 36.8 12.5 139 81-243 81-247 (316)
110 1ri6_A Putative isomerase YBHE 94.3 0.35 1.2E-05 39.0 10.3 145 81-249 15-167 (343)
111 1yiq_A Quinohemoprotein alcoho 94.2 3.2 0.00011 37.8 19.3 109 81-198 80-199 (689)
112 3fvz_A Peptidyl-glycine alpha- 94.1 2 6.7E-05 34.8 18.5 150 116-278 154-312 (329)
113 1vyh_C Platelet-activating fac 94.0 1.7 5.9E-05 36.5 14.1 135 81-246 130-268 (410)
114 2hes_X YDR267CP; beta-propelle 94.0 0.93 3.2E-05 36.8 12.0 148 81-251 34-192 (330)
115 2dg1_A DRP35, lactonase; beta 93.9 0.92 3.2E-05 36.6 12.0 122 115-249 54-177 (333)
116 3fvz_A Peptidyl-glycine alpha- 93.8 2.2 7.5E-05 34.6 17.1 144 81-248 69-232 (329)
117 3scy_A Hypothetical bacterial 93.8 2.3 7.8E-05 34.7 14.7 102 81-194 29-130 (361)
118 3hfq_A Uncharacterized protein 93.8 0.33 1.1E-05 39.6 9.1 103 134-249 18-124 (347)
119 4g56_B MGC81050 protein; prote 93.8 0.58 2E-05 38.6 10.5 166 81-279 161-334 (357)
120 1pgu_A Actin interacting prote 93.7 3.4 0.00012 36.3 17.2 135 117-279 456-605 (615)
121 2ojh_A Uncharacterized protein 93.7 1.7 5.8E-05 33.8 12.9 146 81-251 22-170 (297)
122 3bws_A Protein LP49; two-domai 93.5 1.1 3.7E-05 37.6 12.1 98 134-246 101-203 (433)
123 2xbg_A YCF48-like protein; pho 93.5 2.6 8.7E-05 34.3 14.7 166 91-288 109-283 (327)
124 1jmx_B Amine dehydrogenase; ox 93.5 0.36 1.2E-05 39.1 8.8 144 81-246 21-178 (349)
125 3zwl_B Eukaryotic translation 93.5 0.93 3.2E-05 36.8 11.4 64 167-247 186-253 (369)
126 2hqs_A Protein TOLB; TOLB, PAL 93.4 3.1 0.00011 35.0 16.0 146 81-251 247-395 (415)
127 4aez_A CDC20, WD repeat-contai 93.4 1.1 3.9E-05 37.3 11.8 94 134-244 113-206 (401)
128 4gga_A P55CDC, cell division c 93.3 1.1 3.6E-05 37.8 11.7 96 134-245 125-220 (420)
129 1w6s_A Methanol dehydrogenase 93.2 4.5 0.00015 36.2 17.6 108 81-199 73-199 (599)
130 1pjx_A Dfpase, DIISOPROPYLFLUO 93.2 2.6 8.9E-05 33.4 13.6 105 81-198 46-166 (314)
131 3g4e_A Regucalcin; six bladed 93.1 1.9 6.4E-05 34.4 12.3 176 81-279 73-264 (297)
132 1nir_A Nitrite reductase; hemo 93.0 0.54 1.8E-05 41.5 9.5 92 81-195 159-259 (543)
133 4a11_B DNA excision repair pro 92.9 0.79 2.7E-05 37.9 10.2 103 116-244 111-219 (408)
134 1yiq_A Quinohemoprotein alcoho 92.9 3 0.0001 38.0 14.6 120 111-249 65-200 (689)
135 1kb0_A Quinohemoprotein alcoho 92.9 2.1 7.3E-05 38.9 13.5 120 111-249 72-207 (677)
136 3ott_A Two-component system se 92.8 5.7 0.00019 36.4 16.7 168 82-277 393-577 (758)
137 2pbi_B Guanine nucleotide-bind 92.8 1.6 5.6E-05 35.8 11.9 93 134-245 176-273 (354)
138 2ynn_A Coatomer subunit beta'; 92.8 1.6 5.4E-05 34.9 11.5 134 81-244 35-173 (304)
139 3i2n_A WD repeat-containing pr 92.6 1.7 5.9E-05 35.0 11.7 137 81-246 44-202 (357)
140 2ad6_A Methanol dehydrogenase 92.5 2.9 9.8E-05 37.1 13.6 121 111-249 57-193 (571)
141 3sfz_A APAF-1, apoptotic pepti 92.3 1.3 4.4E-05 43.1 12.0 134 81-246 1025-1161(1249)
142 3dr2_A Exported gluconolactona 92.3 1.9 6.5E-05 34.5 11.4 116 116-245 96-226 (305)
143 1kv9_A Type II quinohemoprotei 92.2 3.3 0.00011 37.6 13.8 120 111-249 61-195 (668)
144 3g4e_A Regucalcin; six bladed 92.2 1.7 5.9E-05 34.6 10.9 138 81-246 35-185 (297)
145 3k26_A Polycomb protein EED; W 92.2 3 0.0001 33.7 12.6 105 117-245 85-194 (366)
146 3e5z_A Putative gluconolactona 91.9 3.8 0.00013 32.3 16.1 175 81-282 90-282 (296)
147 2ojh_A Uncharacterized protein 91.9 3.5 0.00012 31.9 15.2 150 81-251 110-266 (297)
148 2pm9_A Protein WEB1, protein t 91.9 4.7 0.00016 33.3 14.4 144 81-245 188-339 (416)
149 4e54_B DNA damage-binding prot 91.8 1.1 3.8E-05 37.9 9.8 109 116-245 131-242 (435)
150 3iz6_a 40S ribosomal protein R 91.7 4.5 0.00016 33.4 13.3 94 168-279 170-271 (380)
151 2p4o_A Hypothetical protein; p 91.6 4.4 0.00015 32.4 16.0 133 81-243 53-198 (306)
152 2vdu_B TRNA (guanine-N(7)-)-me 91.5 2.4 8E-05 36.0 11.6 108 116-246 160-274 (450)
153 1r5m_A SIR4-interacting protei 91.4 5.2 0.00018 33.0 15.7 106 116-245 119-238 (425)
154 3ei3_B DNA damage-binding prot 91.4 2 7E-05 35.3 10.9 107 118-245 87-196 (383)
155 3mkq_A Coatomer beta'-subunit; 91.2 2.2 7.4E-05 39.2 11.8 135 81-245 77-219 (814)
156 1erj_A Transcriptional repress 91.1 2.2 7.4E-05 35.6 10.8 135 81-244 145-288 (393)
157 1sq9_A Antiviral protein SKI8; 91.0 5.7 0.00019 32.6 14.6 63 118-193 82-157 (397)
158 1erj_A Transcriptional repress 91.0 1.7 5.9E-05 36.2 10.1 106 116-246 134-241 (393)
159 3u4y_A Uncharacterized protein 90.9 2.2 7.6E-05 34.1 10.4 110 115-248 8-122 (331)
160 3sfz_A APAF-1, apoptotic pepti 90.9 2.4 8.3E-05 41.2 12.3 167 81-279 983-1149(1249)
161 3i2n_A WD repeat-containing pr 90.8 2.9 9.9E-05 33.7 11.1 96 81-194 139-244 (357)
162 1vyh_C Platelet-activating fac 90.8 2.7 9.3E-05 35.2 11.2 106 116-246 119-226 (410)
163 2ghs_A AGR_C_1268P; regucalcin 90.8 5.6 0.00019 32.1 13.5 135 81-242 71-209 (326)
164 3zwl_B Eukaryotic translation 90.7 4.5 0.00016 32.6 12.3 139 81-243 54-206 (369)
165 3mmy_A MRNA export factor; mRN 90.7 3.9 0.00014 32.9 11.9 54 215-279 284-337 (368)
166 3m0c_C LDL receptor, low-densi 90.6 11 0.00036 35.0 18.1 133 115-276 481-620 (791)
167 3k26_A Polycomb protein EED; W 90.6 2 6.8E-05 34.8 10.0 94 168-278 85-182 (366)
168 3azo_A Aminopeptidase; POP fam 90.5 9.3 0.00032 34.1 16.5 153 81-251 161-333 (662)
169 1ijq_A LDL receptor, low-densi 90.3 6.2 0.00021 31.8 15.7 158 81-276 10-183 (316)
170 3ott_A Two-component system se 90.3 7.4 0.00025 35.7 14.4 109 116-250 482-593 (758)
171 3c5m_A Oligogalacturonate lyas 90.2 6.6 0.00023 32.1 13.0 158 80-251 167-337 (396)
172 1yfq_A Cell cycle arrest prote 90.2 6.1 0.00021 31.5 13.2 104 116-243 67-179 (342)
173 2fp8_A Strictosidine synthase; 90.1 3 0.0001 33.6 10.6 138 81-244 165-314 (322)
174 1nir_A Nitrite reductase; hemo 90.1 9.2 0.00031 33.6 14.5 56 185-247 303-359 (543)
175 3u4y_A Uncharacterized protein 90.1 6.1 0.00021 31.5 13.8 168 81-276 62-240 (331)
176 3v65_B Low-density lipoprotein 90.1 7.4 0.00025 32.4 15.4 161 81-276 96-265 (386)
177 4gqb_B Methylosome protein 50; 90.1 2.6 8.9E-05 34.5 10.2 96 134-246 103-204 (344)
178 2xyi_A Probable histone-bindin 90.1 2.1 7E-05 36.2 9.8 106 117-244 141-264 (430)
179 1w6s_A Methanol dehydrogenase 89.9 5.6 0.00019 35.6 12.8 122 111-249 57-199 (599)
180 3odt_A Protein DOA1; ubiquitin 89.9 5.2 0.00018 31.4 11.7 109 114-251 193-304 (313)
181 1pjx_A Dfpase, DIISOPROPYLFLUO 89.8 6.2 0.00021 31.1 16.2 145 81-245 92-258 (314)
182 1pgu_A Actin interacting prote 89.8 9.7 0.00033 33.3 16.3 134 81-243 467-614 (615)
183 4ggc_A P55CDC, cell division c 89.6 4.1 0.00014 32.1 10.9 56 134-195 45-100 (318)
184 1pby_B Quinohemoprotein amine 89.3 2.6 8.9E-05 33.6 9.6 143 81-246 11-166 (337)
185 3dr2_A Exported gluconolactona 89.3 3.5 0.00012 32.9 10.3 126 133-279 168-299 (305)
186 3hrp_A Uncharacterized protein 89.3 8.9 0.00031 32.2 16.1 138 81-244 152-299 (409)
187 4aow_A Guanine nucleotide-bind 89.3 6.9 0.00024 31.1 12.1 62 168-245 185-248 (340)
188 2ynn_A Coatomer subunit beta'; 89.2 5.7 0.0002 31.5 11.5 165 81-279 77-250 (304)
189 1flg_A Protein (quinoprotein e 89.0 12 0.0004 33.3 18.3 108 82-198 79-200 (582)
190 2vdu_B TRNA (guanine-N(7)-)-me 89.0 3.9 0.00013 34.7 10.8 136 118-279 116-262 (450)
191 1flg_A Protein (quinoprotein e 88.8 9.8 0.00034 33.8 13.5 119 111-248 63-200 (582)
192 3v65_B Low-density lipoprotein 88.4 9.9 0.00034 31.7 17.4 130 115-275 169-305 (386)
193 3v64_C Agrin; beta propeller, 88.4 9.3 0.00032 31.3 15.6 161 81-276 53-222 (349)
194 1yfq_A Cell cycle arrest prote 88.2 1.9 6.3E-05 34.7 8.0 53 215-280 262-315 (342)
195 4a11_B DNA excision repair pro 88.1 9.7 0.00033 31.1 13.0 24 167-196 256-279 (408)
196 3hrp_A Uncharacterized protein 88.0 11 0.00037 31.7 14.4 139 116-277 230-399 (409)
197 3scy_A Hypothetical bacterial 88.0 2.2 7.7E-05 34.8 8.4 113 119-244 15-130 (361)
198 3f3f_A Nucleoporin SEH1; struc 88.0 8.6 0.00029 30.4 16.7 66 117-195 71-145 (351)
199 3lrv_A PRE-mRNA-splicing facto 87.8 9.6 0.00033 30.7 15.7 66 167-246 138-204 (343)
200 3tc9_A Hypothetical hydrolase; 87.7 4.3 0.00015 34.5 10.1 133 116-275 149-288 (430)
201 3odt_A Protein DOA1; ubiquitin 87.7 4 0.00014 32.0 9.6 103 115-240 27-130 (313)
202 4aow_A Guanine nucleotide-bind 87.4 9.5 0.00033 30.3 13.7 128 134-279 195-328 (340)
203 3gre_A Serine/threonine-protei 86.9 12 0.00043 31.1 12.9 106 117-245 182-294 (437)
204 1npe_A Nidogen, entactin; glyc 86.8 9.4 0.00032 29.5 13.8 107 116-246 133-241 (267)
205 3mmy_A MRNA export factor; mRN 86.7 6 0.0002 31.8 10.3 105 117-245 54-162 (368)
206 3dm0_A Maltose-binding peripla 86.6 16 0.00056 32.8 14.0 60 169-245 532-594 (694)
207 3azo_A Aminopeptidase; POP fam 86.5 17 0.00059 32.3 16.7 148 81-250 217-376 (662)
208 2xbg_A YCF48-like protein; pho 86.5 12 0.0004 30.3 18.4 156 90-276 65-223 (327)
209 1sq9_A Antiviral protein SKI8; 86.4 3.2 0.00011 34.1 8.6 61 169-243 82-157 (397)
210 2ymu_A WD-40 repeat protein; u 86.3 6 0.00021 34.5 10.6 133 116-279 437-571 (577)
211 2hz6_A Endoplasmic reticulum t 86.0 0.64 2.2E-05 38.7 3.9 130 81-248 19-156 (369)
212 2hz6_A Endoplasmic reticulum t 85.8 0.97 3.3E-05 37.6 5.0 107 112-248 5-118 (369)
213 1n7d_A LDL receptor, low-densi 85.0 8.6 0.00029 35.1 11.1 133 115-276 463-602 (699)
214 3gre_A Serine/threonine-protei 84.9 16 0.00054 30.5 12.7 139 81-245 192-361 (437)
215 2p4o_A Hypothetical protein; p 84.6 14 0.00046 29.4 13.8 167 82-277 96-278 (306)
216 3v64_C Agrin; beta propeller, 84.4 15 0.00053 29.9 19.8 131 115-276 126-263 (349)
217 2z3z_A Dipeptidyl aminopeptida 84.3 23 0.00078 31.8 17.2 156 80-250 234-398 (706)
218 2xyi_A Probable histone-bindin 83.9 5.6 0.00019 33.5 9.0 63 167-243 243-309 (430)
219 2xdw_A Prolyl endopeptidase; a 83.8 25 0.00085 31.8 15.7 148 81-250 259-423 (710)
220 3p5b_L Low density lipoprotein 83.7 18 0.00063 30.2 16.3 132 115-275 169-307 (400)
221 3o4h_A Acylamino-acid-releasin 83.5 6.6 0.00023 34.5 9.6 134 83-241 134-274 (582)
222 3dm0_A Maltose-binding peripla 83.3 25 0.00087 31.6 14.6 103 118-246 532-635 (694)
223 3b7f_A Glycosyl hydrolase, BNR 83.2 18 0.00063 29.9 12.8 146 82-251 32-216 (394)
224 3f3f_A Nucleoporin SEH1; struc 82.3 16 0.00056 28.7 14.3 29 215-251 317-346 (351)
225 2bkl_A Prolyl endopeptidase; m 82.1 29 0.00098 31.3 15.8 180 81-276 147-337 (695)
226 1ijq_A LDL receptor, low-densi 81.7 19 0.00064 28.9 18.4 133 115-276 87-226 (316)
227 2ymu_A WD-40 repeat protein; u 81.6 22 0.00076 30.8 12.3 133 116-278 355-488 (577)
228 2p9w_A MAL S 1 allergenic prot 81.2 21 0.00072 29.2 13.9 139 116-277 147-304 (334)
229 4h5i_A Guanine nucleotide-exch 80.9 21 0.00073 29.1 13.5 111 114-243 228-343 (365)
230 3frx_A Guanine nucleotide-bind 79.4 22 0.00074 28.3 11.7 135 116-279 76-218 (319)
231 2z3z_A Dipeptidyl aminopeptida 79.2 35 0.0012 30.6 16.8 64 184-250 235-301 (706)
232 3lrv_A PRE-mRNA-splicing facto 79.0 23 0.00079 28.4 14.1 104 116-245 138-246 (343)
233 1nr0_A Actin interacting prote 78.8 22 0.00075 31.5 11.4 106 116-244 459-568 (611)
234 1npe_A Nidogen, entactin; glyc 78.5 21 0.00071 27.5 17.7 164 81-276 58-226 (267)
235 2gop_A Trilobed protease; beta 78.1 17 0.00059 29.0 9.8 104 133-250 151-258 (347)
236 3frx_A Guanine nucleotide-bind 78.0 24 0.00082 28.0 11.6 55 81-147 87-142 (319)
237 1n7d_A LDL receptor, low-densi 77.8 33 0.0011 31.2 12.3 108 116-245 507-616 (699)
238 3c5m_A Oligogalacturonate lyas 77.8 19 0.00066 29.2 10.2 153 81-251 216-392 (396)
239 4hw6_A Hypothetical protein, I 77.7 24 0.00083 29.9 10.8 105 117-246 153-262 (433)
240 3oyo_A Hemopexin fold protein 77.5 22 0.00074 27.2 10.7 58 215-283 127-195 (225)
241 4gga_A P55CDC, cell division c 76.9 31 0.0011 28.6 14.6 136 81-245 125-263 (420)
242 1pby_B Quinohemoprotein amine 75.9 27 0.00092 27.4 13.5 109 133-247 10-128 (337)
243 1pex_A Collagenase-3, MMP-13; 75.7 23 0.00079 26.6 18.2 143 111-283 28-189 (207)
244 2ecf_A Dipeptidyl peptidase IV 75.3 47 0.0016 29.9 13.1 107 134-250 263-375 (741)
245 1su3_A Interstitial collagenas 74.7 40 0.0014 28.8 14.5 58 215-283 367-429 (450)
246 3m0c_C LDL receptor, low-densi 74.6 54 0.0019 30.4 17.4 92 115-223 524-620 (791)
247 1qhu_A Protein (hemopexin); be 74.6 40 0.0014 28.9 14.2 57 116-194 158-216 (460)
248 2xzm_R RACK1; ribosome, transl 74.6 31 0.0011 27.6 11.1 61 167-244 87-150 (343)
249 1qks_A Cytochrome CD1 nitrite 74.5 14 0.00047 32.8 8.6 105 116-245 166-277 (567)
250 2bkl_A Prolyl endopeptidase; m 74.5 49 0.0017 29.8 16.3 148 81-250 252-404 (695)
251 3iuj_A Prolyl endopeptidase; h 74.4 49 0.0017 29.8 15.2 148 81-251 259-413 (693)
252 3o4h_A Acylamino-acid-releasin 74.4 13 0.00045 32.6 8.6 98 136-247 134-231 (582)
253 3pe7_A Oligogalacturonate lyas 74.3 33 0.0011 27.8 11.7 159 80-251 167-337 (388)
254 1k32_A Tricorn protease; prote 74.3 49 0.0017 31.6 13.0 109 134-251 358-469 (1045)
255 3p5b_L Low density lipoprotein 71.7 43 0.0015 27.9 15.2 160 81-276 92-265 (400)
256 2ecf_A Dipeptidyl peptidase IV 71.7 57 0.002 29.3 15.3 62 185-250 264-328 (741)
257 4ggc_A P55CDC, cell division c 71.6 33 0.0011 26.6 11.5 56 81-146 45-101 (318)
258 3pe7_A Oligogalacturonate lyas 71.1 40 0.0014 27.3 13.0 156 81-251 60-233 (388)
259 3ju4_A Endo-N-acetylneuraminid 70.4 49 0.0017 28.0 14.2 186 90-282 269-486 (670)
260 2qe8_A Uncharacterized protein 70.2 41 0.0014 27.1 14.5 53 215-277 258-310 (343)
261 3tc9_A Hypothetical hydrolase; 70.0 9.1 0.00031 32.5 6.3 134 81-242 159-300 (430)
262 2p9w_A MAL S 1 allergenic prot 69.6 44 0.0015 27.2 15.6 148 81-243 35-215 (334)
263 1yr2_A Prolyl oligopeptidase; 69.2 67 0.0023 29.2 16.1 148 81-251 294-449 (741)
264 3lp9_A LS-24; SEED albumin, pl 68.3 37 0.0013 25.9 9.3 60 167-244 129-202 (227)
265 1itv_A MMP9; adaptive molecula 67.6 35 0.0012 25.3 15.1 143 111-283 11-171 (195)
266 3sjl_D Methylamine dehydrogena 66.9 33 0.0011 28.7 8.8 69 167-245 291-365 (386)
267 2xzm_R RACK1; ribosome, transl 66.3 49 0.0017 26.4 12.3 63 116-194 87-150 (343)
268 4a0p_A LRP6, LRP-6, low-densit 64.8 79 0.0027 28.3 17.1 130 115-276 90-225 (628)
269 2xdw_A Prolyl endopeptidase; a 64.7 81 0.0028 28.4 14.0 106 133-250 258-376 (710)
270 2ghs_A AGR_C_1268P; regucalcin 64.3 53 0.0018 26.2 12.3 110 116-248 60-173 (326)
271 1qks_A Cytochrome CD1 nitrite 64.2 76 0.0026 28.0 14.2 54 185-245 321-375 (567)
272 3hxj_A Pyrrolo-quinoline quino 64.2 50 0.0017 25.9 14.6 128 81-248 117-250 (330)
273 1itv_A MMP9; adaptive molecula 63.0 44 0.0015 24.8 11.8 101 116-245 64-176 (195)
274 2cn3_A Xyloglucanase, beta-1,4 61.9 96 0.0033 28.3 11.8 122 143-282 595-728 (737)
275 2kwv_A RAD30 homolog B, DNA po 59.7 4.2 0.00014 22.1 1.3 17 4-20 21-37 (48)
276 3vu4_A KMHSV2; beta-propeller 59.2 69 0.0023 25.8 14.5 54 215-278 206-261 (355)
277 1nr0_A Actin interacting prote 56.3 1.1E+02 0.0036 27.0 17.2 109 116-249 250-361 (611)
278 1hxn_A Hemopexin, HPX; heme, b 55.0 66 0.0023 24.3 13.2 93 167-283 72-194 (219)
279 1jof_A Carboxy-CIS,CIS-muconat 54.4 84 0.0029 25.3 12.7 15 81-95 167-182 (365)
280 2be1_A Serine/threonine-protei 54.4 39 0.0013 27.7 7.0 102 134-249 20-138 (339)
281 2cn3_A Xyloglucanase, beta-1,4 52.9 76 0.0026 29.0 9.4 59 194-252 232-292 (737)
282 3sjl_D Methylamine dehydrogena 50.3 45 0.0015 27.9 6.8 73 115-196 290-366 (386)
283 3hxj_A Pyrrolo-quinoline quino 49.3 92 0.0031 24.3 13.8 149 81-276 157-313 (330)
284 3vu4_A KMHSV2; beta-propeller 48.1 1.1E+02 0.0036 24.6 11.2 65 116-194 206-272 (355)
285 3kya_A Putative phosphatase; s 46.8 1.4E+02 0.0049 25.8 10.2 112 116-242 151-277 (496)
286 4a0p_A LRP6, LRP-6, low-densit 46.7 1.6E+02 0.0055 26.3 19.3 162 81-276 15-185 (628)
287 1jof_A Carboxy-CIS,CIS-muconat 45.8 1.2E+02 0.004 24.4 12.6 16 133-148 166-182 (365)
288 2b4w_A Hypothetical protein, c 45.4 81 0.0028 25.0 7.0 59 166-225 39-99 (315)
289 1yr2_A Prolyl oligopeptidase; 44.7 1.8E+02 0.0061 26.3 14.0 104 133-249 293-401 (741)
290 1pex_A Collagenase-3, MMP-13; 43.6 1E+02 0.0034 23.1 14.1 101 116-245 79-194 (207)
291 3b7f_A Glycosyl hydrolase, BNR 43.2 1.4E+02 0.0046 24.5 18.7 169 82-275 82-297 (394)
292 1fwx_A Nitrous oxide reductase 42.4 46 0.0016 29.6 5.9 170 81-271 254-457 (595)
293 2mad_H Methylamine dehydrogena 42.2 1.4E+02 0.0048 24.4 10.4 71 115-195 277-352 (373)
294 2qe8_A Uncharacterized protein 42.2 1.3E+02 0.0044 24.0 14.6 123 116-249 27-161 (343)
295 3sov_A LRP-6, low-density lipo 41.7 1.3E+02 0.0045 23.9 16.3 106 115-245 132-240 (318)
296 3ba0_A Macrophage metalloelast 38.3 1.7E+02 0.0057 24.1 15.8 140 111-283 185-347 (365)
297 3ba0_A Macrophage metalloelast 37.7 1.7E+02 0.0058 24.1 13.8 106 116-248 236-355 (365)
298 3sov_A LRP-6, low-density lipo 37.1 1.6E+02 0.0054 23.5 18.5 130 115-275 89-225 (318)
299 3qhy_B Beta-lactamase inhibito 33.3 1.7E+02 0.0059 22.8 11.3 17 159-176 112-128 (282)
300 3sre_A PON1, serum paraoxonase 33.0 2E+02 0.0069 23.5 12.2 147 80-243 82-252 (355)
301 2mad_H Methylamine dehydrogena 32.8 2E+02 0.0069 23.4 12.0 70 167-245 278-352 (373)
302 3dw8_B Serine/threonine-protei 32.0 2.1E+02 0.0071 23.3 14.1 26 215-248 353-378 (447)
303 2dae_A KIAA0733 protein; mitog 31.6 24 0.00083 21.2 1.7 16 3-18 20-35 (75)
304 2oaj_A Protein SNI1; WD40 repe 30.9 3.3E+02 0.011 25.4 10.8 25 215-247 222-246 (902)
305 3c75_H MADH, methylamine dehyd 30.1 1.9E+02 0.0064 24.4 7.6 116 116-245 84-211 (426)
306 2gop_A Trilobed protease; beta 29.6 2E+02 0.0069 22.5 11.2 148 81-250 43-214 (347)
307 2xe4_A Oligopeptidase B; hydro 28.5 3.4E+02 0.012 24.7 16.4 96 81-191 295-398 (751)
308 1qhu_A Protein (hemopexin); be 28.1 2.8E+02 0.0097 23.7 18.2 48 82-145 168-217 (460)
309 1ck7_A Protein (gelatinase A); 26.9 3.5E+02 0.012 24.3 14.4 143 111-283 448-612 (631)
310 2l9b_B MRNA 3'-END-processing 26.1 33 0.0011 19.1 1.5 20 5-25 5-24 (53)
311 3q6k_A 43.2 kDa salivary prote 26.1 2.8E+02 0.0096 23.0 10.9 79 116-200 97-198 (381)
312 2oaj_A Protein SNI1; WD40 repe 26.1 4.1E+02 0.014 24.8 15.2 94 81-196 39-132 (902)
313 3ju4_A Endo-N-acetylneuraminid 26.1 3.1E+02 0.01 23.4 12.7 124 148-279 276-408 (670)
314 3a0f_A Xyloglucanase; beta-pro 25.3 3.9E+02 0.013 24.4 13.0 37 215-251 256-292 (763)
315 3c7x_A Matrix metalloproteinas 23.5 2.2E+02 0.0076 20.9 8.4 63 116-195 109-177 (196)
316 2w18_A PALB2, fancn, partner a 23.1 3.1E+02 0.011 22.5 12.1 135 134-279 203-348 (356)
317 3iuj_A Prolyl endopeptidase; h 22.7 4.1E+02 0.014 23.7 18.1 157 81-250 155-324 (693)
318 2lh0_A Histone chaperone RTT10 22.2 54 0.0019 19.7 2.0 30 4-33 9-40 (70)
319 2ece_A 462AA long hypothetical 22.0 3.8E+02 0.013 23.0 11.1 70 167-245 95-175 (462)
320 1gen_A Gelatinase A; hydrolase 21.9 2.5E+02 0.0087 21.0 18.5 143 111-283 35-199 (218)
321 3c75_H MADH, methylamine dehyd 21.7 3.6E+02 0.012 22.6 10.2 69 167-245 330-404 (426)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1e-34 Score=242.27 Aligned_cols=187 Identities=22% Similarity=0.347 Sum_probs=159.3
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCC-CCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDL-TTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+++||+.+++|+.++++|.++..+ ++++++++||++||.+. .+....+++++||+.+++|+.++++| .+|..
T Consensus 67 ~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~ 141 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPPLPSPRCLF----GLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-YVVYG 141 (315)
T ss_dssp EEEEEEETTTTEEEECCCBSSCEESC----EEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-SCCBS
T ss_pred cceEEecCCCCeEEECCCCCcchhce----eEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-Ccccc
Confidence 56999999999999999999988876 88899999999999753 22247889999999999999999999 56667
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAF 239 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~y 239 (289)
+++++ .+++||++||........+++++||+.+++|+.++++|.+|..+++++++++||++||..... ..+.+++|
T Consensus 142 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~y 217 (315)
T 4asc_A 142 HTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTG---LTSSAEVY 217 (315)
T ss_dssp CEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSS---EEEEEEEE
T ss_pred eeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCC---ccceEEEE
Confidence 76666 599999999986555677899999999999999999999999999999999999999987542 56789999
Q ss_pred ECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 240 DAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 240 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
|+++++|+.++.+ +.. +..++++..+++||++||.+.
T Consensus 218 d~~~~~W~~~~~~--p~~-r~~~~~~~~~~~l~v~GG~~~ 254 (315)
T 4asc_A 218 SITDNKWAPFEAF--PQE-RSSLSLVSLVGTLYAIGGFAT 254 (315)
T ss_dssp ETTTTEEEEECCC--SSC-CBSCEEEEETTEEEEEEEEEE
T ss_pred ECCCCeEEECCCC--CCc-ccceeEEEECCEEEEECCccc
Confidence 9999999999874 333 334467778999999999753
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=240.26 Aligned_cols=228 Identities=18% Similarity=0.250 Sum_probs=179.8
Q ss_pred HHHHHHhhhHHhhhcChhHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCCCCC
Q 048803 25 ATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPD 104 (289)
Q Consensus 25 ~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 104 (289)
.++....++|..+...|.....+.... .+..+|++|+.. . ....++++||+.+++|+.++++|.++.
T Consensus 27 ~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~--~----------~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 27 RYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQ--L----------FPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBS--S----------SBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCC--C----------CCcceEEEEeCCCCeEEECCCCCcccc
Confidence 334445678998877665433333333 345566666653 1 122789999999999999999999888
Q ss_pred CCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcc--
Q 048803 105 GLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNA-- 182 (289)
Q Consensus 105 ~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~-- 182 (289)
.+ ++++++++||++||.+... ...+++++||+.+++|+.++++| .++..+++++ .+++||++||.......
T Consensus 94 ~~----~~~~~~~~iyv~GG~~~~~-~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 166 (306)
T 3ii7_A 94 SL----AACAAEGKIYTSGGSEVGN-SALYLFECYDTRTESWHTKPSML-TQRCSHGMVE-ANGLIYVCGGSLGNNVSGR 166 (306)
T ss_dssp SC----EEEEETTEEEEECCBBTTB-SCCCCEEEEETTTTEEEEECCCS-SCCBSCEEEE-ETTEEEEECCEESCTTTCE
T ss_pred ce----eEEEECCEEEEECCCCCCC-cEeeeEEEEeCCCCceEeCCCCc-CCcceeEEEE-ECCEEEEECCCCCCCCccc
Confidence 76 8889999999999986333 46889999999999999999999 5666666666 49999999998654322
Q ss_pred -cCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCC
Q 048803 183 -LKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPR 261 (289)
Q Consensus 183 -~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~ 261 (289)
.+++++||+++++|+.++++|.+|..+++++++++||++||.+.. ...+.+++||+.+++|+.++.+ +.. +..
T Consensus 167 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~---~~~~~~~~yd~~~~~W~~~~~~--p~~-r~~ 240 (306)
T 3ii7_A 167 VLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGL---GGLDNVEYYDIKLNEWKMVSPM--PWK-GVT 240 (306)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT---EEBCCEEEEETTTTEEEECCCC--SCC-BSC
T ss_pred ccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCC---CCCceEEEeeCCCCcEEECCCC--CCC-ccc
Confidence 678999999999999999999999999999999999999998754 2467899999999999999874 333 334
Q ss_pred ceeeeeCCeEEEEeCce
Q 048803 262 SCAGVDSNDLYMCREGD 278 (289)
Q Consensus 262 ~~~~~~~~~ly~~GG~~ 278 (289)
++++..+++||++||.+
T Consensus 241 ~~~~~~~~~i~v~GG~~ 257 (306)
T 3ii7_A 241 VKCAAVGSIVYVLAGFQ 257 (306)
T ss_dssp CEEEEETTEEEEEECBC
T ss_pred eeEEEECCEEEEEeCcC
Confidence 46677799999999964
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=2.2e-34 Score=239.56 Aligned_cols=233 Identities=19% Similarity=0.265 Sum_probs=180.4
Q ss_pred hHHHHHHHhhhHHhhhcChhHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCCC
Q 048803 23 QFATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGF 102 (289)
Q Consensus 23 ~l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~ 102 (289)
++..+....++|..+...|.....+... ..+..+|++|+..... .......++++||+.+++|+.++++|.+
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~-------~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 111 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSP-------DGNTDSSALDCYNPMTNQWSPCAPMSVP 111 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEET-------TEEEECCCEEEEETTTTEEEECCCCSSC
T ss_pred eEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCC-------CCCeecceEEEECCCCCeEeECCCCCcC
Confidence 3444455678899887666533322223 2345566666653110 0001126899999999999999999998
Q ss_pred CCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcc
Q 048803 103 PDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNA 182 (289)
Q Consensus 103 ~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 182 (289)
+..+ ++++++++||++||..... ..+++++||+.+++|+.++++| .++..+++++ .+++||++||..... .
T Consensus 112 r~~~----~~~~~~~~iyv~GG~~~~~--~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~-~ 182 (308)
T 1zgk_A 112 RNRI----GVGVIDGHIYAVGGSHGCI--HHNSVERYEPERDEWHLVAPML-TRRIGVGVAV-LNRLLYAVGGFDGTN-R 182 (308)
T ss_dssp CBTC----EEEEETTEEEEECCEETTE--ECCCEEEEETTTTEEEECCCCS-SCCBSCEEEE-ETTEEEEECCBCSSC-B
T ss_pred cccc----EEEEECCEEEEEcCCCCCc--ccccEEEECCCCCeEeECCCCC-ccccceEEEE-ECCEEEEEeCCCCCC-c
Confidence 8876 8888999999999986543 5788999999999999999999 5666666666 499999999987643 4
Q ss_pred cCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCc
Q 048803 183 LKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRS 262 (289)
Q Consensus 183 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~ 262 (289)
.+++++||+.+++|+.++++|.+|..+++++++++||++||..... ..+++++||+++++|+.+..+ +..+ ..+
T Consensus 183 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~--p~~r-~~~ 256 (308)
T 1zgk_A 183 LNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQD---QLNSVERYDVETETWTFVAPM--KHRR-SAL 256 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSS---BCCCEEEEETTTTEEEECCCC--SSCC-BSC
T ss_pred CceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCC---ccceEEEEeCCCCcEEECCCC--CCCc-cce
Confidence 7789999999999999999999999999999999999999987532 467899999999999999864 3333 344
Q ss_pred eeeeeCCeEEEEeCce
Q 048803 263 CAGVDSNDLYMCREGD 278 (289)
Q Consensus 263 ~~~~~~~~ly~~GG~~ 278 (289)
+++..+++||++||.+
T Consensus 257 ~~~~~~~~i~v~GG~~ 272 (308)
T 1zgk_A 257 GITVHQGRIYVLGGYD 272 (308)
T ss_dssp EEEEETTEEEEECCBC
T ss_pred EEEEECCEEEEEcCcC
Confidence 6677899999999964
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=239.52 Aligned_cols=228 Identities=20% Similarity=0.296 Sum_probs=179.0
Q ss_pred HHHHHHhhhHHhhhcChhHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCCCCC
Q 048803 25 ATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPD 104 (289)
Q Consensus 25 ~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 104 (289)
..+....++|..+...|.....+..+. .+..+|++|+.... ....++++||+.+++|+.++++|.++.
T Consensus 33 ~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~-----------~~~~~~~~~d~~~~~W~~~~~~p~~r~ 100 (302)
T 2xn4_A 33 ECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGS-----------LRVRTVDSYDPVKDQWTSVANMRDRRS 100 (302)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSS-----------SBCCCEEEEETTTTEEEEECCCSSCCB
T ss_pred EEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCC-----------ccccceEEECCCCCceeeCCCCCcccc
Confidence 334445678988866655322222222 35566666665322 122688999999999999999999888
Q ss_pred CCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCC-ccc
Q 048803 105 GLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDK-NAL 183 (289)
Q Consensus 105 ~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~-~~~ 183 (289)
.+ ++++++++||++||.+... ..+++++||+.+++|+.+++++ .++..+++++ .+++||++||..... ...
T Consensus 101 ~~----~~~~~~~~iyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 101 TL----GAAVLNGLLYAVGGFDGST--GLSSVEAYNIKSNEWFHVAPMN-TRRSSVGVGV-VGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp SC----EEEEETTEEEEEEEECSSC--EEEEEEEEETTTTEEEEECCCS-SCCBSCEEEE-ETTEEEEECCEETTTTEEC
T ss_pred ce----EEEEECCEEEEEcCCCCCc--cCceEEEEeCCCCeEeecCCCC-CcccCceEEE-ECCEEEEEeCCCCCCCccc
Confidence 76 8888999999999987543 5788999999999999999999 5666676666 499999999986543 246
Q ss_pred CceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCce
Q 048803 184 KSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSC 263 (289)
Q Consensus 184 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~ 263 (289)
+++++||+.+++|+.++++|.+|..+++++++++||++||.+.. ...+.+++||+++++|+.++.++ ..+ ..++
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~---~~~~~~~~yd~~~~~W~~~~~~~--~~r-~~~~ 246 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGP---LVRKSVEVYDPTTNAWRQVADMN--MCR-RNAG 246 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSS---SBCCCEEEEETTTTEEEEECCCS--SCC-BSCE
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCC---cccceEEEEeCCCCCEeeCCCCC--Ccc-ccCe
Confidence 78999999999999999999999999999999999999998653 24678999999999999998743 323 3446
Q ss_pred eeeeCCeEEEEeCce
Q 048803 264 AGVDSNDLYMCREGD 278 (289)
Q Consensus 264 ~~~~~~~ly~~GG~~ 278 (289)
++..+++||++||.+
T Consensus 247 ~~~~~~~i~v~GG~~ 261 (302)
T 2xn4_A 247 VCAVNGLLYVVGGDD 261 (302)
T ss_dssp EEEETTEEEEECCBC
T ss_pred EEEECCEEEEECCcC
Confidence 777899999999965
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-33 Score=236.18 Aligned_cols=187 Identities=24% Similarity=0.411 Sum_probs=159.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
..+++||+.+++|+.++++|.++..+ ++++++++||++||.........+++++||+.+++|+.++++| .++..+
T Consensus 78 ~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~ 152 (318)
T 2woz_A 78 SYFFQLDNVSSEWVGLPPLPSARCLF----GLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLP-IKVYGH 152 (318)
T ss_dssp BEEEEEETTTTEEEECSCBSSCBCSC----EEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCS-SCEESC
T ss_pred ccEEEEeCCCCcEEECCCCCcccccc----ceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCC-Cccccc
Confidence 45899999999999999999998876 8888999999999986433246789999999999999999999 566667
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEE
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
++++ .+++||++||........+++++||+.+++|+.++++|.+|..+++++++++||++||..... ..+.+++||
T Consensus 153 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd 228 (318)
T 2woz_A 153 NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDG---LSASVEAFD 228 (318)
T ss_dssp EEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTE---EEEEEEEEE
T ss_pred EEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCC---ccceEEEEE
Confidence 6666 599999999986555567889999999999999999999999999999999999999987532 567899999
Q ss_pred CCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 241 AAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 241 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
+++++|+.++.+ |.. +..++++..+++||++||.+.
T Consensus 229 ~~~~~W~~~~~~--p~~-r~~~~~~~~~~~i~v~GG~~~ 264 (318)
T 2woz_A 229 LKTNKWEVMTEF--PQE-RSSISLVSLAGSLYAIGGFAM 264 (318)
T ss_dssp TTTCCEEECCCC--SSC-CBSCEEEEETTEEEEECCBCC
T ss_pred CCCCeEEECCCC--CCc-ccceEEEEECCEEEEECCeec
Confidence 999999999874 333 334467778999999999753
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.9e-33 Score=231.18 Aligned_cols=186 Identities=17% Similarity=0.260 Sum_probs=159.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
+++++||+.+++|+.++++|.++..+ ++++++++||++||.. . ...+++++||+.+++|+.++++| .+|..+
T Consensus 24 ~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~-~--~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~ 95 (306)
T 3ii7_A 24 QSCRYFNPKDYSWTDIRCPFEKRRDA----ACVFWDNVVYILGGSQ-L--FPIKRMDCYNVVKDSWYSKLGPP-TPRDSL 95 (306)
T ss_dssp TSEEEEETTTTEEEECCCCSCCCBSC----EEEEETTEEEEECCBS-S--SBCCEEEEEETTTTEEEEEECCS-SCCBSC
T ss_pred ceEEEecCCCCCEecCCCCCccccee----EEEEECCEEEEEeCCC-C--CCcceEEEEeCCCCeEEECCCCC-ccccce
Confidence 68899999999999999999988876 8889999999999987 2 46889999999999999999999 566677
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCC-CcccceEEEE
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQ-GRFERHAEAF 239 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~-~~~~~~v~~y 239 (289)
++++ .+++||++||.+......+++++||+.+++|+.++++|.+|..+++++++++||++||...... +...+.+++|
T Consensus 96 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~y 174 (306)
T 3ii7_A 96 AACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVY 174 (306)
T ss_dssp EEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEE
T ss_pred eEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEe
Confidence 7666 4999999999875455678999999999999999999999999999999999999999875431 1236789999
Q ss_pred ECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCce
Q 048803 240 DAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 240 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
|+.+++|+.++.+ +.. +..++++..+++||++||.+
T Consensus 175 d~~~~~W~~~~~~--p~~-r~~~~~~~~~~~i~v~GG~~ 210 (306)
T 3ii7_A 175 DPATETWTELCPM--IEA-RKNHGLVFVKDKIFAVGGQN 210 (306)
T ss_dssp ETTTTEEEEECCC--SSC-CBSCEEEEETTEEEEECCEE
T ss_pred CCCCCeEEECCCc--cch-hhcceEEEECCEEEEEeCCC
Confidence 9999999999864 333 33456777899999999964
No 7
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5.5e-33 Score=231.11 Aligned_cols=214 Identities=20% Similarity=0.260 Sum_probs=164.0
Q ss_pred cChhHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCE
Q 048803 39 SRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPE 118 (289)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (289)
+++.....+.++...+.+++++ +. .. ...+++++||+.+++|+.++++|.++..+ ++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~i~v~G-G~-~~-----------~~~~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~ 72 (308)
T 1zgk_A 10 SSGLVPRGSHAPKVGRLIYTAG-GY-FR-----------QSLSYLEAYNPSNGTWLRLADLQVPRSGL----AGCVVGGL 72 (308)
T ss_dssp -----------CCCCCCEEEEC-CB-SS-----------SBCCCEEEEETTTTEEEECCCCSSCCBSC----EEEEETTE
T ss_pred cCCeeeCCccccCCCCEEEEEe-Cc-CC-----------CCcceEEEEcCCCCeEeECCCCCcccccc----eEEEECCE
Confidence 3444445555555555555554 44 11 12268999999999999999999988876 78889999
Q ss_pred EEEEeCcCC--CCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 119 LVVIGGLDL--TTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 119 lyv~GG~~~--~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
||++||... ......+++++||+.+++|+.+++++ .+|..+++++ .+++||++||.... ...+++++||+.+++|
T Consensus 73 lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W 149 (308)
T 1zgk_A 73 LYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMS-VPRNRIGVGV-IDGHIYAVGGSHGC-IHHNSVERYEPERDEW 149 (308)
T ss_dssp EEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCS-SCCBTCEEEE-ETTEEEEECCEETT-EECCCEEEEETTTTEE
T ss_pred EEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCC-cCccccEEEE-ECCEEEEEcCCCCC-cccccEEEECCCCCeE
Confidence 999999831 11136789999999999999999999 5677777766 49999999998754 3567899999999999
Q ss_pred EeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 197 ASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
+.++++|.+|..+++++++++||++||..... ..+.+++||+.+++|+.++.+ +..+ ..++++..+++||++||
T Consensus 150 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~~~~W~~~~~~--p~~r-~~~~~~~~~~~iyv~GG 223 (308)
T 1zgk_A 150 HLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN---RLNSAECYYPERNEWRMITAM--NTIR-SGAGVCVLHNCIYAAGG 223 (308)
T ss_dssp EECCCCSSCCBSCEEEEETTEEEEECCBCSSC---BCCCEEEEETTTTEEEECCCC--SSCC-BSCEEEEETTEEEEECC
T ss_pred eECCCCCccccceEEEEECCEEEEEeCCCCCC---cCceEEEEeCCCCeEeeCCCC--CCcc-ccceEEEECCEEEEEeC
Confidence 99999999999999999999999999987542 367899999999999999874 3333 34466777999999999
Q ss_pred ce
Q 048803 277 GD 278 (289)
Q Consensus 277 ~~ 278 (289)
.+
T Consensus 224 ~~ 225 (308)
T 1zgk_A 224 YD 225 (308)
T ss_dssp BC
T ss_pred CC
Confidence 64
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=233.04 Aligned_cols=228 Identities=20% Similarity=0.291 Sum_probs=179.4
Q ss_pred HHHHHHHhhhHHhhhcChhHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCC---eEeCCCCC
Q 048803 24 FATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGE---WSELPPIP 100 (289)
Q Consensus 24 l~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~~~~~~ 100 (289)
+..+....++|..+...|.....+.... .+..+|++|+.... ....++++||+.+++ |+.++++|
T Consensus 33 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~-----------~~~~~~~~~d~~~~~~~~W~~~~~~p 100 (301)
T 2vpj_A 33 VEKYDPKTQEWSFLPSITRKRRYVASVS-LHDRIYVIGGYDGR-----------SRLSSVECLDYTADEDGVWYSVAPMN 100 (301)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSS-----------CBCCCEEEEETTCCTTCCCEEECCCS
T ss_pred EEEEcCCCCeEEeCCCCChhhccccEEE-ECCEEEEEcCCCCC-----------ccCceEEEEECCCCCCCeeEECCCCC
Confidence 3344455678988876665322222232 34556666665321 122689999999999 99999999
Q ss_pred CCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCC
Q 048803 101 GFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDK 180 (289)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~ 180 (289)
.++..+ +++.++++||++||..... ..+++++||+.+++|+.+++++ .++..+++++ .+++||++||.+..
T Consensus 101 ~~r~~~----~~~~~~~~lyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~- 171 (301)
T 2vpj_A 101 VRRGLA----GATTLGDMIYVSGGFDGSR--RHTSMERYDPNIDQWSMLGDMQ-TAREGAGLVV-ASGVIYCLGGYDGL- 171 (301)
T ss_dssp SCCBSC----EEEEETTEEEEECCBCSSC--BCCEEEEEETTTTEEEEEEECS-SCCBSCEEEE-ETTEEEEECCBCSS-
T ss_pred CCccce----eEEEECCEEEEEcccCCCc--ccceEEEEcCCCCeEEECCCCC-CCcccceEEE-ECCEEEEECCCCCC-
Confidence 988876 8888999999999987553 5789999999999999999998 5666666666 49999999998754
Q ss_pred cccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCC
Q 048803 181 NALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCP 260 (289)
Q Consensus 181 ~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~ 260 (289)
...+++++||+.+++|+.++++|.+|..+++++++++||++||.+... ..+.+++||+++++|+.++.+ +..+ .
T Consensus 172 ~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~--p~~r-~ 245 (301)
T 2vpj_A 172 NILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTA---HLSSVEAYNIRTDSWTTVTSM--TTPR-C 245 (301)
T ss_dssp CBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSS---BCCCEEEEETTTTEEEEECCC--SSCC-B
T ss_pred cccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCc---ccceEEEEeCCCCcEEECCCC--CCcc-c
Confidence 357889999999999999999999999999999999999999987532 357899999999999999874 3333 3
Q ss_pred CceeeeeCCeEEEEeCce
Q 048803 261 RSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 261 ~~~~~~~~~~ly~~GG~~ 278 (289)
.++++..+++||++||.+
T Consensus 246 ~~~~~~~~~~i~v~GG~~ 263 (301)
T 2vpj_A 246 YVGATVLRGRLYAIAGYD 263 (301)
T ss_dssp SCEEEEETTEEEEECCBC
T ss_pred ceeEEEECCEEEEEcCcC
Confidence 345677799999999964
No 9
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=228.59 Aligned_cols=185 Identities=22% Similarity=0.402 Sum_probs=157.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
.++++||+.+++|+.++++|.++..+ +++.++++||++||..... ..+++++||+.+++|+.+++++ .+|..+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~lyv~GG~~~~~--~~~~~~~~d~~~~~W~~~~~~p-~~r~~~ 102 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRA----GMVYMAGLVFAVGGFNGSL--RVRTVDSYDPVKDQWTSVANMR-DRRSTL 102 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSC----EEEEETTEEEEESCBCSSS--BCCCEEEEETTTTEEEEECCCS-SCCBSC
T ss_pred CcEEEEcCcCCcEeEcccCCcccccc----eEEEECCEEEEEeCcCCCc--cccceEEECCCCCceeeCCCCC-ccccce
Confidence 57899999999999999999988766 7888999999999987553 5789999999999999999999 567677
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEE
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
++++ .+++||++||.... ...+++++||+.+++|+.++++|.+|..+++++++++||++||.+... ....+.+++||
T Consensus 103 ~~~~-~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~yd 179 (302)
T 2xn4_A 103 GAAV-LNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVAS-RQCLSTVECYN 179 (302)
T ss_dssp EEEE-ETTEEEEEEEECSS-CEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTT-TEECCCEEEEE
T ss_pred EEEE-ECCEEEEEcCCCCC-ccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCC-CccccEEEEEe
Confidence 7776 49999999998754 456789999999999999999999999999999999999999987542 12467899999
Q ss_pred CCCCceeecccccccCCCCCCceeeeeCCeEEEEeCce
Q 048803 241 AAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 241 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
+.+++|+.++.+ +.. +..+++++.+++||++||.+
T Consensus 180 ~~~~~W~~~~~~--p~~-r~~~~~~~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 180 ATTNEWTYIAEM--STR-RSGAGVGVLNNLLYAVGGHD 214 (302)
T ss_dssp TTTTEEEEECCC--SSC-CBSCEEEEETTEEEEECCBS
T ss_pred CCCCcEEECCCC--ccc-cccccEEEECCEEEEECCCC
Confidence 999999999874 333 33446777899999999964
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=9.2e-32 Score=222.95 Aligned_cols=183 Identities=26% Similarity=0.382 Sum_probs=157.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe---EEeCCCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT---WRRGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~ 157 (289)
.++++||+.+++|+.++++|.++..+ +++..+++||++||.... ...+++++||+.+++ |+.++++| .+|
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~----~~~~~~~~l~v~GG~~~~--~~~~~~~~~d~~~~~~~~W~~~~~~p-~~r 103 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYV----ASVSLHDRIYVIGGYDGR--SRLSSVECLDYTADEDGVWYSVAPMN-VRR 103 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC----EEEEETTEEEEECCBCSS--CBCCCEEEEETTCCTTCCCEEECCCS-SCC
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccc----cEEEECCEEEEEcCCCCC--ccCceEEEEECCCCCCCeeEECCCCC-CCc
Confidence 68999999999999999999988766 888899999999998744 367899999999999 99999999 567
Q ss_pred cceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEE
Q 048803 158 MLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 158 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
..+++++ .+++||++||.... ...+++++||+.+++|+.++++|.+|..+++++++++||++||.+... ..+.++
T Consensus 104 ~~~~~~~-~~~~lyv~GG~~~~-~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~ 178 (301)
T 2vpj_A 104 GLAGATT-LGDMIYVSGGFDGS-RRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLN---ILNSVE 178 (301)
T ss_dssp BSCEEEE-ETTEEEEECCBCSS-CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSC---BCCCEE
T ss_pred cceeEEE-ECCEEEEEcccCCC-cccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCc---ccceEE
Confidence 7777766 49999999998754 346789999999999999999999999999999999999999986532 567899
Q ss_pred EEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCce
Q 048803 238 AFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 238 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
+||+.+++|+.++.+ +..+ ..++++..+++||++||.+
T Consensus 179 ~~d~~~~~W~~~~~~--p~~r-~~~~~~~~~~~i~v~GG~~ 216 (301)
T 2vpj_A 179 KYDPHTGHWTNVTPM--ATKR-SGAGVALLNDHIYVVGGFD 216 (301)
T ss_dssp EEETTTTEEEEECCC--SSCC-BSCEEEEETTEEEEECCBC
T ss_pred EEeCCCCcEEeCCCC--Cccc-ccceEEEECCEEEEEeCCC
Confidence 999999999999764 3333 3446777899999999975
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.5e-31 Score=223.16 Aligned_cols=187 Identities=19% Similarity=0.277 Sum_probs=149.7
Q ss_pred eEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcC----CCCcccccceEEEEccCCeEEeCCCCCCCCc
Q 048803 82 RITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLD----LTTWEASSSVFVFNIISATWRRGADMPGGRR 157 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~----~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~ 157 (289)
++++|||.+++|+. +++|.|.. +.++++++.+++||++||.. .......+++++||+.+++|+.++++| .+|
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r 89 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVP--KNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP-SPR 89 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSC--SSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS-SCE
T ss_pred ceEEECCCCCeEec-CCCCCCCC--ccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC-cch
Confidence 67899999999987 66654322 12447888899999999962 222234566999999999999999999 567
Q ss_pred cceeEEEecCCEEEEEcCCC--CCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccce
Q 048803 158 MLFGCASDGDRTVYVAGGHD--EDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 158 ~~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~ 235 (289)
..+++++ .+++||++||.. +.....+++++||+.+++|+.++++|.+|..|++++++++||++||.... ....++
T Consensus 90 ~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~~ 166 (315)
T 4asc_A 90 CLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSD--RKCLNK 166 (315)
T ss_dssp ESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTT--SCBCCC
T ss_pred hceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCC--Ccccce
Confidence 7777776 499999999975 22346788999999999999999999999999999999999999998432 236788
Q ss_pred EEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCce
Q 048803 236 AEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 236 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
+++||+.+++|+.++.+ |.. +..+++++.+++||++||.+
T Consensus 167 ~~~yd~~~~~W~~~~~~--p~~-r~~~~~~~~~~~iyv~GG~~ 206 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPM--QTA-RSLFGATVHDGRIIVAAGVT 206 (315)
T ss_dssp EEEEETTTTEEEECCCC--SSC-CBSCEEEEETTEEEEEEEEC
T ss_pred EEEEeCCCCeEEECCCC--CCc-hhceEEEEECCEEEEEeccC
Confidence 99999999999999874 333 33446777899999999964
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.98 E-value=6.8e-31 Score=222.89 Aligned_cols=202 Identities=15% Similarity=0.211 Sum_probs=156.3
Q ss_pred CCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECC--CCCeEeCCCCC-CCCCCCCceeEEEEeCCEEEEEeCc-C--C
Q 048803 54 EQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELG--SGEWSELPPIP-GFPDGLPLFCQLSAVGPELVVIGGL-D--L 127 (289)
Q Consensus 54 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~lyv~GG~-~--~ 127 (289)
+..+|++|+... .++++||+. +++|+.++++| .+|..+ ++++++++|||+||. . .
T Consensus 19 ~~~iyv~GG~~~---------------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~----~~~~~~~~lyv~GG~~~~~~ 79 (357)
T 2uvk_A 19 NDTVYIGLGSAG---------------TAWYKLDTQAKDKKWTALAAFPGGPRDQA----TSAFIDGNLYVFGGIGKNSE 79 (357)
T ss_dssp TTEEEEECGGGT---------------TCEEEEETTSSSCCEEECCCCTTCCCBSC----EEEEETTEEEEECCEEECTT
T ss_pred CCEEEEEeCcCC---------------CeEEEEccccCCCCeeECCCCCCCcCccc----eEEEECCEEEEEcCCCCCCC
Confidence 566667666522 478999998 49999999999 788766 888999999999998 3 2
Q ss_pred CCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCC---------------------------
Q 048803 128 TTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDK--------------------------- 180 (289)
Q Consensus 128 ~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~--------------------------- 180 (289)
......+++++||+.+++|+.+++++..+|..+++++ .+++||++||.....
T Consensus 80 ~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 80 GLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp SCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred ccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 2224688999999999999999988734566666666 599999999976421
Q ss_pred ------cccCceEEEEcCCCceEeCCCCCccccc-cceEEECCEEEEEeeecCCCCCcccceEEEEEC--CCCceeeccc
Q 048803 181 ------NALKSAMAYDVARDEWASLPDMSRERDE-CKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDA--AAQQWGPVEE 251 (289)
Q Consensus 181 ------~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~--~~~~W~~~~~ 251 (289)
...+++++||+.+++|+.++++|.++.. +++++++++||++||.... +...+.+++||+ .+++|+.+..
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~--~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKP--GLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEET--TEECCCEEEEECC---CEEEECCC
T ss_pred ccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCC--CcccCceEEEEecCCCCcEEecCC
Confidence 1347899999999999999999876554 8888999999999998653 224567899986 8999999988
Q ss_pred ccccCCCCCCceeeeeCCeEEEEeCce
Q 048803 252 DFMETATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
++.+ ..+..+++++.+++||++||.+
T Consensus 237 ~~~~-~~~~~~~~~~~~~~iyv~GG~~ 262 (357)
T 2uvk_A 237 VSSP-DGVAGGFAGISNDSLIFAGGAG 262 (357)
T ss_dssp SSTT-TCCBSCEEEEETTEEEEECCEE
T ss_pred CCCC-cccccceEEEECCEEEEEcCcc
Confidence 6333 2233445777899999999954
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.98 E-value=4.5e-32 Score=226.59 Aligned_cols=228 Identities=19% Similarity=0.320 Sum_probs=172.9
Q ss_pred HHHHHHhhhHHhhhcChhHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCCCCC
Q 048803 25 ATISSVCKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPD 104 (289)
Q Consensus 25 ~~~~~v~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 104 (289)
.++....++|..+...|.....+..... +..+|++|+..... .....++++||+.+++|+.++++|.++.
T Consensus 81 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~---------~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 150 (318)
T 2woz_A 81 FQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQT---------EASLDSVLCYDPVAAKWSEVKNLPIKVY 150 (318)
T ss_dssp EEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTT---------CCEEEEEEEEETTTTEEEEECCCSSCEE
T ss_pred EEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCC---------CcccceEEEEeCCCCCEeECCCCCCccc
Confidence 3444556889888766653322233333 44556665553211 1223789999999999999999999887
Q ss_pred CCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccC
Q 048803 105 GLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALK 184 (289)
Q Consensus 105 ~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 184 (289)
.+ ++++.+++||++||..... ...+++++||+.+++|+.+++++ .+|..+++++ .+++||++||.... ...+
T Consensus 151 ~~----~~~~~~~~iyv~GG~~~~~-~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~ 222 (318)
T 2woz_A 151 GH----NVISHNGMIYCLGGKTDDK-KCTNRVFIYNPKKGDWKDLAPMK-TPRSMFGVAI-HKGKIVIAGGVTED-GLSA 222 (318)
T ss_dssp SC----EEEEETTEEEEECCEESSS-CBCCCEEEEETTTTEEEEECCCS-SCCBSCEEEE-ETTEEEEEEEEETT-EEEE
T ss_pred cc----EEEEECCEEEEEcCCCCCC-CccceEEEEcCCCCEEEECCCCC-CCcccceEEE-ECCEEEEEcCcCCC-Cccc
Confidence 76 7888999999999985433 46789999999999999999998 5666666666 49999999998764 3467
Q ss_pred ceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCC--C----CcccceEEEEECCCCceeecccccccCCC
Q 048803 185 SAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNA--Q----GRFERHAEAFDAAAQQWGPVEEDFMETAT 258 (289)
Q Consensus 185 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~--~----~~~~~~v~~yd~~~~~W~~~~~~~~~~~~ 258 (289)
++++||+++++|+.++++|.+|..+++++++++||++||..... . ....+++++||+++++|+.+ + +..+
T Consensus 223 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~--~~~r 298 (318)
T 2woz_A 223 SVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L--KEIR 298 (318)
T ss_dssp EEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E--SCCG
T ss_pred eEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c--cccc
Confidence 89999999999999999999999999999999999999986421 0 12457899999999999998 1 2222
Q ss_pred CCCceeeeeCCeEEEEe
Q 048803 259 CPRSCAGVDSNDLYMCR 275 (289)
Q Consensus 259 ~~~~~~~~~~~~ly~~G 275 (289)
..++++.++++||++.
T Consensus 299 -~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 299 -YASGASCLATRLNLFK 314 (318)
T ss_dssp -GGTTCEEEEEEEEGGG
T ss_pred -ccccceeeCCEEEEEE
Confidence 2334566799999874
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=1.9e-31 Score=226.23 Aligned_cols=233 Identities=12% Similarity=0.113 Sum_probs=162.9
Q ss_pred hhhHHhhhcCh-hHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCC-CCCCCCCc
Q 048803 31 CKGWKSEISRP-EFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIP-GFPDGLPL 108 (289)
Q Consensus 31 ~k~W~~l~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~-~~~~~~~~ 108 (289)
.++|..+...| .....+.... .+..+|++|+....... ......++++||+.+++|+.+++++ .++..+
T Consensus 42 ~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~------~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~-- 112 (357)
T 2uvk_A 42 DKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEG------LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGH-- 112 (357)
T ss_dssp SCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTS------CEEECCCEEEEETTTTEEEECSCCCSSCCSSE--
T ss_pred CCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCc------cceeeccEEEEeCCCCcEEECCCCCCcccccc--
Confidence 36899887766 3222222232 34556666665220000 0112268999999999999999988 555543
Q ss_pred eeEEEEeCCEEEEEeCcCCCC--------------------------------cccccceEEEEccCCeEEeCCCCCCCC
Q 048803 109 FCQLSAVGPELVVIGGLDLTT--------------------------------WEASSSVFVFNIISATWRRGADMPGGR 156 (289)
Q Consensus 109 ~~~~~~~~~~lyv~GG~~~~~--------------------------------~~~~~~~~~yd~~t~~W~~~~~~~~~~ 156 (289)
++++.+++||++||.+... ....+++++||+.+++|+.++++|.++
T Consensus 113 --~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~ 190 (357)
T 2uvk_A 113 --VTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYG 190 (357)
T ss_dssp --EEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCC
T ss_pred --eEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCC
Confidence 7777999999999975321 013578999999999999999988555
Q ss_pred ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEc--CCCceEeCCCCCccc--cccceEEECCEEEEEeeecCCC----
Q 048803 157 RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDV--ARDEWASLPDMSRER--DECKAVFHCGKLLVIGGYSTNA---- 228 (289)
Q Consensus 157 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~~--~~~~~~~~~~~l~~~gG~~~~~---- 228 (289)
+..+++++ .+++||++||.........+++.||+ ++++|+.+++++.++ ..+++++++++||++||.....
T Consensus 191 ~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 269 (357)
T 2uvk_A 191 TAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSREN 269 (357)
T ss_dssp CBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHH
T ss_pred cccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCccc
Confidence 65466665 49999999998654445677899986 899999999887664 4666889999999999976321
Q ss_pred ----------CCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCce
Q 048803 229 ----------QGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 229 ----------~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
.......+++||+++++|+.++.+ |..+.. ++++..+++|||+||.+
T Consensus 270 ~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~-~~~~~~~~~i~v~GG~~ 326 (357)
T 2uvk_A 270 YQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGEL--SQGRAY-GVSLPWNNSLLIIGGET 326 (357)
T ss_dssp HHTTCSSTTTTCCCEECCEEEECC---CEEEEEC--SSCCBS-SEEEEETTEEEEEEEEC
T ss_pred ccccceeccccccceeeEEEEecCCCceeeCCCC--CCCccc-ceeEEeCCEEEEEeeeC
Confidence 112345789999999999999874 333333 45667899999999964
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=3.4e-29 Score=228.89 Aligned_cols=185 Identities=14% Similarity=0.154 Sum_probs=152.3
Q ss_pred eeEEEEECCCCCeEeCC-C-----CCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCC
Q 048803 81 YRITVLELGSGEWSELP-P-----IPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADM 152 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~-~-----~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~ 152 (289)
+++++||+.+++|+.++ + +|.+|..+ +++++ +++|||+||..... ...+++++||+.+++|+.++++
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h----s~~~~~~~~~lyv~GG~~~~~-~~~~dv~~yd~~t~~W~~~~~~ 486 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCH----TFTTISRNNQLLLIGGRKAPH-QGLSDNWIFDMKTREWSMIKSL 486 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSC----EEEEETTTTEEEEECCBSSTT-CBCCCCEEEETTTTEEEECCCC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccce----EEEEEccCCEEEEEcCCCCCC-CccccEEEEeCCCCcEEECCCC
Confidence 68999999999999988 5 67777665 88889 99999999987554 3678999999999999999999
Q ss_pred CCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCC---CCccccccceEEEC---CEEEEEeeecC
Q 048803 153 PGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPD---MSRERDECKAVFHC---GKLLVIGGYST 226 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~~~~~~~~~~~---~~l~~~gG~~~ 226 (289)
| .+|..++++++.+++||++||..... ++++||+.+++|+.+++ +|.+|..|++++++ ++||++||...
T Consensus 487 p-~~R~~h~~~~~~~~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~ 561 (695)
T 2zwa_A 487 S-HTRFRHSACSLPDGNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFM 561 (695)
T ss_dssp S-BCCBSCEEEECTTSCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCT
T ss_pred C-CCcccceEEEEcCCEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCC
Confidence 9 57777777764499999999987643 79999999999999987 88899999988877 89999999854
Q ss_pred CCCCcccceEEEEECCCCc------eeecccccccCCCCCCceeeeeC-CeEEEEeCce
Q 048803 227 NAQGRFERHAEAFDAAAQQ------WGPVEEDFMETATCPRSCAGVDS-NDLYMCREGD 278 (289)
Q Consensus 227 ~~~~~~~~~v~~yd~~~~~------W~~~~~~~~~~~~~~~~~~~~~~-~~ly~~GG~~ 278 (289)
.. ....+++++||+.+++ |+.+..++ + ..+..+++++.+ ++||++||.+
T Consensus 562 ~~-~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p-~-~~R~~~~~~~~~~~~iyv~GG~~ 617 (695)
T 2zwa_A 562 DQ-TTVSDKAIIFKYDAENATEPITVIKKLQHP-L-FQRYGSQIKYITPRKLLIVGGTS 617 (695)
T ss_dssp TS-SCBCCEEEEEEECTTCSSCCEEEEEEEECG-G-GCCBSCEEEEEETTEEEEECCBC
T ss_pred CC-CeeeCcEEEEEccCCccccceEEEEcCCCC-C-CCcccceEEEeCCCEEEEECCcc
Confidence 32 2356889999999999 88887732 2 233444566667 9999999964
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=2.7e-28 Score=222.99 Aligned_cols=230 Identities=11% Similarity=0.115 Sum_probs=165.0
Q ss_pred HHhhhHHhhh-c-----ChhHHHHhhhcCCC-CCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCC
Q 048803 29 SVCKGWKSEI-S-----RPEFRRNRKDTRSS-EQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPG 101 (289)
Q Consensus 29 ~v~k~W~~l~-~-----~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~ 101 (289)
...++|..+. . .|.....+...... +..+|++||...... ..+++++||+.+++|+.++++|.
T Consensus 419 ~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~----------~~~dv~~yd~~t~~W~~~~~~p~ 488 (695)
T 2zwa_A 419 IHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQ----------GLSDNWIFDMKTREWSMIKSLSH 488 (695)
T ss_dssp ECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTC----------BCCCCEEEETTTTEEEECCCCSB
T ss_pred CCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCC----------ccccEEEEeCCCCcEEECCCCCC
Confidence 3456788876 4 23322223333332 556777766643221 23689999999999999999999
Q ss_pred CCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCC---CCCCCccceeEEEe-cC-CEEEEEcC
Q 048803 102 FPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGAD---MPGGRRMLFGCASD-GD-RTVYVAGG 175 (289)
Q Consensus 102 ~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~---~~~~~~~~~~~~~~-~~-~~iyv~GG 175 (289)
++..+ +++++ +++|||+||.+... ++++||+.+++|+.+++ +| .++..+++++. .+ ++||++||
T Consensus 489 ~R~~h----~~~~~~~~~iyv~GG~~~~~-----~v~~yd~~t~~W~~~~~~g~~p-~~r~~~~a~v~~~~~~~iyv~GG 558 (695)
T 2zwa_A 489 TRFRH----SACSLPDGNVLILGGVTEGP-----AMLLYNVTEEIFKDVTPKDEFF-QNSLVSAGLEFDPVSKQGIILGG 558 (695)
T ss_dssp CCBSC----EEEECTTSCEEEECCBCSSC-----SEEEEETTTTEEEECCCSSGGG-GSCCBSCEEEEETTTTEEEEECC
T ss_pred Ccccc----eEEEEcCCEEEEECCCCCCC-----CEEEEECCCCceEEccCCCCCC-CcccceeEEEEeCCCCEEEEECC
Confidence 98876 77775 99999999986442 89999999999999986 66 45656654442 12 89999999
Q ss_pred CCCCC-cccCceEEEEcCCCc------eEeCCCC-CccccccceEEEC-CEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 176 HDEDK-NALKSAMAYDVARDE------WASLPDM-SRERDECKAVFHC-GKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 176 ~~~~~-~~~~~~~~yd~~~~~------W~~~~~~-~~~~~~~~~~~~~-~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
..... ...+++++||+.+++ |+.+.++ +.+|.++++++++ ++||++||..........+.+++||+.+++|
T Consensus 559 ~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 559 GFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp BCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred cCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 86543 457889999999999 8988775 5789999999999 9999999986543223567899999999999
Q ss_pred eecccccc----cCCCCCCceeeeeCC-eEEEEeCce
Q 048803 247 GPVEEDFM----ETATCPRSCAGVDSN-DLYMCREGD 278 (289)
Q Consensus 247 ~~~~~~~~----~~~~~~~~~~~~~~~-~ly~~GG~~ 278 (289)
+.+..+.. +.+....++++..++ +|||+||..
T Consensus 639 ~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 639 TSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred EEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 97643211 011223344544454 999999964
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.93 E-value=2.4e-25 Score=203.05 Aligned_cols=233 Identities=17% Similarity=0.169 Sum_probs=154.4
Q ss_pred hhhHHhhhcChhHHHHhhhcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCCCCCCCCcee
Q 048803 31 CKGWKSEISRPEFRRNRKDTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPDGLPLFC 110 (289)
Q Consensus 31 ~k~W~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~ 110 (289)
..+|..+...|.. ....++...+..+|++|+..... .+ ........+++||+.+++|+.++.+|.++..+. ..
T Consensus 175 ~~~W~~~~~~P~~-~~~~av~~~~g~l~v~GG~~~~~--~~---~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~-~~ 247 (656)
T 1k3i_A 175 LGRWGPTIDLPIV-PAAAAIEPTSGRVLMWSSYRNDA--FG---GSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFC-PG 247 (656)
T ss_dssp SCEEEEEEECSSC-CSEEEEETTTTEEEEEEECCCTT--TC---SCCCSEEEEEEECTTTCCBCCCEEEECSCCCSS-CE
T ss_pred CCeeeeeccCCCC-ceeEEEEecCCEEEEEecccccc--cc---cCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcc-cc
Confidence 4678888777662 11222222144555555443211 00 001123578999999999999998887776541 11
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEE
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYD 190 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 190 (289)
.++..+++||++||... .++++||+.+++|+++++|+ .+|..++++++.+++||++||..+.....+++++||
T Consensus 248 ~~~~~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~~~-~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPDMQ-VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp EEECTTSCEEEECSSST------TCEEEEEGGGTEEEECCCCS-SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred ccCCCCCCEEEeCCCCC------CceEEecCcCCceeECCCCC-ccccccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 23346899999999753 36999999999999999999 466667666633999999999644344677899999
Q ss_pred cCCCceEeCC-----CCCcccc--------------------------------------------------------cc
Q 048803 191 VARDEWASLP-----DMSRERD--------------------------------------------------------EC 209 (289)
Q Consensus 191 ~~~~~W~~~~-----~~~~~~~--------------------------------------------------------~~ 209 (289)
+++++|+.++ +++..+. ..
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 9999999863 3332210 11
Q ss_pred ceEE----ECCEEEEEeeecCCCCCcccc---eEEEEECCCCceeecccccccCCCCCCceeee-eCCeEEEEeCce
Q 048803 210 KAVF----HCGKLLVIGGYSTNAQGRFER---HAEAFDAAAQQWGPVEEDFMETATCPRSCAGV-DSNDLYMCREGD 278 (289)
Q Consensus 210 ~~~~----~~~~l~~~gG~~~~~~~~~~~---~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ly~~GG~~ 278 (289)
+.++ .+++||++||.....+....+ .+++||+.+++|..+....++..+..+ +++. .+++||++||.+
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~-~~~~l~~g~i~v~GG~~ 476 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFH-TSVVLPDGSTFITGGQR 476 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSC-EEEECTTSCEEEECCBS
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccC-CeEECCCCCEEEECCcc
Confidence 2333 389999999975422222333 789999999999998621234444333 4444 499999999954
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.93 E-value=3.7e-25 Score=201.83 Aligned_cols=228 Identities=11% Similarity=0.052 Sum_probs=159.3
Q ss_pred HHHHhhhHHhhhcChhHHHHhh--hcCCCCCeEEEEeeeeccccCCCCCCCCCCCceeEEEEECCCCCeEeCCCCCCCCC
Q 048803 27 ISSVCKGWKSEISRPEFRRNRK--DTRSSEQLLFMTQARVDQSRKSGVPKRFATPVYRITVLELGSGEWSELPPIPGFPD 104 (289)
Q Consensus 27 ~~~v~k~W~~l~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~~~~~~ 104 (289)
+.....+|+.+...+....... .....+..+|+.|+... ..+++||+.+++|..+++++.+|.
T Consensus 224 yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~---------------~~v~~yd~~t~~W~~~~~~~~~R~ 288 (656)
T 1k3i_A 224 WDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA---------------KKTSLYDSSSDSWIPGPDMQVARG 288 (656)
T ss_dssp ECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST---------------TCEEEEEGGGTEEEECCCCSSCCS
T ss_pred EeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC---------------CceEEecCcCCceeECCCCCcccc
Confidence 3445677887765443221111 11123445556555422 268899999999999999999888
Q ss_pred CCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCC-----CCCCCCc---------------------
Q 048803 105 GLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGA-----DMPGGRR--------------------- 157 (289)
Q Consensus 105 ~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~-----~~~~~~~--------------------- 157 (289)
.+ +++++ +++||++||..... ...+.+++||+.+++|+.++ +++....
T Consensus 289 ~~----s~~~~~dg~iyv~GG~~~~~-~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~ 363 (656)
T 1k3i_A 289 YQ----SSATMSDGRVFTIGGSWSGG-VFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVF 363 (656)
T ss_dssp SC----EEEECTTSCEEEECCCCCSS-SCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEE
T ss_pred cc----ceEEecCCeEEEEeCcccCC-cccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEE
Confidence 76 77888 99999999953322 36788999999999999863 3331100
Q ss_pred ----------------------------------cceeEEE---ecCCEEEEEcCCCCC--CcccC---ceEEEEcCCCc
Q 048803 158 ----------------------------------MLFGCAS---DGDRTVYVAGGHDED--KNALK---SAMAYDVARDE 195 (289)
Q Consensus 158 ----------------------------------~~~~~~~---~~~~~iyv~GG~~~~--~~~~~---~~~~yd~~~~~ 195 (289)
...+.++ ..+++||++||.... ....+ .+++||+.+++
T Consensus 364 ~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~ 443 (656)
T 1k3i_A 364 QAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSP 443 (656)
T ss_dssp ECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC
T ss_pred EecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC
Confidence 0112333 248999999997431 12233 68899999999
Q ss_pred eEeCC--CCCccccccceEEE-CCEEEEEeeecCCC---CCcccceEEEEECCCCceeecccccccCCCCCCceeeee--
Q 048803 196 WASLP--DMSRERDECKAVFH-CGKLLVIGGYSTNA---QGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD-- 267 (289)
Q Consensus 196 W~~~~--~~~~~~~~~~~~~~-~~~l~~~gG~~~~~---~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-- 267 (289)
|..+. +||.+|..++++++ +|+||++||.+... .......+++||+++++|+.+..+ +..+.. ++++..
T Consensus 444 W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~--~~~R~~-hs~a~ll~ 520 (656)
T 1k3i_A 444 NTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN--SIVRVY-HSISLLLP 520 (656)
T ss_dssp EEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC--SSCCCT-TEEEEECT
T ss_pred eeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC--CCcccc-ccHhhcCC
Confidence 99886 89999999998887 99999999976321 123457899999999999999874 333333 334444
Q ss_pred CCeEEEEeCc
Q 048803 268 SNDLYMCREG 277 (289)
Q Consensus 268 ~~~ly~~GG~ 277 (289)
+++||++||.
T Consensus 521 dg~v~v~GG~ 530 (656)
T 1k3i_A 521 DGRVFNGGGG 530 (656)
T ss_dssp TSCEEEEECC
T ss_pred CcEEEecCCC
Confidence 9999999995
No 19
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.07 E-value=7.7e-11 Score=70.09 Aligned_cols=43 Identities=26% Similarity=0.447 Sum_probs=39.1
Q ss_pred CCCCChHHHHHHHhhcCChhhHHHHHHHhhhHHhhhcChhHHH
Q 048803 3 LIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRR 45 (289)
Q Consensus 3 ~~~~Lp~dl~~~il~~lp~~~l~~~~~v~k~W~~l~~~~~~~~ 45 (289)
.+..||+|++.+||.+||.+++.++++|||+|+.++.++.+.+
T Consensus 8 ~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 8 SWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp -CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 5789999999999999999999999999999999999988754
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.03 E-value=1e-08 Score=88.59 Aligned_cols=44 Identities=32% Similarity=0.471 Sum_probs=38.8
Q ss_pred CCCCCChHH----HHHHHhhcCChhhHHHHHHHhhhHHhhhcChhHHH
Q 048803 2 DLIPDLPNE----IALECLSRVSYKQFATISSVCKGWKSEISRPEFRR 45 (289)
Q Consensus 2 ~~~~~Lp~d----l~~~il~~lp~~~l~~~~~v~k~W~~l~~~~~~~~ 45 (289)
+.|..||+| |+..||++|+.++|.++++|||+|+.++.++.+.+
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~ 56 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWK 56 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHH
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 456679999 99999999999999999999999999998766543
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.02 E-value=6.5e-09 Score=90.40 Aligned_cols=43 Identities=26% Similarity=0.521 Sum_probs=38.6
Q ss_pred CCCCCChHHHHHHHhhcCChhhHHHHHHHhhhHHhhhcC-hhHH
Q 048803 2 DLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISR-PEFR 44 (289)
Q Consensus 2 ~~~~~Lp~dl~~~il~~lp~~~l~~~~~v~k~W~~l~~~-~~~~ 44 (289)
+.|..||+||+..||+.||.++|.+++.|||+|+.++.+ +.+.
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w 56 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLW 56 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 456789999999999999999999999999999999987 6543
No 22
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.00 E-value=1.5e-08 Score=87.65 Aligned_cols=46 Identities=28% Similarity=0.429 Sum_probs=41.8
Q ss_pred CCCCCCChHHHHHHHhhcCChhhHHHHHHHhhhHHhhhcChhHHHH
Q 048803 1 MDLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRN 46 (289)
Q Consensus 1 ~~~~~~Lp~dl~~~il~~lp~~~l~~~~~v~k~W~~l~~~~~~~~~ 46 (289)
++++..||+|++..||.+|+.++|.++++|||+|+.++.++.+.+.
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~ 61 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 61 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhh
Confidence 4678999999999999999999999999999999999988776554
No 23
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.86 E-value=9.6e-10 Score=88.59 Aligned_cols=49 Identities=16% Similarity=0.396 Sum_probs=44.5
Q ss_pred CCCCCChHHHHHHHhhcCChhhHH-HHHHHhhhHHhhhcChhHHHHhhhc
Q 048803 2 DLIPDLPNEIALECLSRVSYKQFA-TISSVCKGWKSEISRPEFRRNRKDT 50 (289)
Q Consensus 2 ~~~~~Lp~dl~~~il~~lp~~~l~-~~~~v~k~W~~l~~~~~~~~~~~~~ 50 (289)
..+..||+||+++||++||.++|. ++++|||+|+.|++++.|.+.+...
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 367899999999999999999999 9999999999999999998775543
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.96 E-value=2.4e-06 Score=68.22 Aligned_cols=45 Identities=22% Similarity=0.344 Sum_probs=41.3
Q ss_pred CCCChHHHHHHHhhcCChhhHHHHHHHhhhHHhhhcChhHHHHhh
Q 048803 4 IPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEFRRNRK 48 (289)
Q Consensus 4 ~~~Lp~dl~~~il~~lp~~~l~~~~~v~k~W~~l~~~~~~~~~~~ 48 (289)
|..||+|++..||+.|++++++++.+|||+|+.+..++.+.+...
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l 49 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFL 49 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHH
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 557999999999999999999999999999999999999876643
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.66 E-value=0.0048 Score=50.81 Aligned_cols=166 Identities=11% Similarity=-0.025 Sum_probs=95.6
Q ss_pred eeEEEEECCCCCeEeCCCC---CCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeE-EeCCCCCCCC
Q 048803 81 YRITVLELGSGEWSELPPI---PGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATW-RRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~---~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~ 156 (289)
..+.++|+.+++...--.. +.+... ....++..++++|+... ....+.++|+.|.+- ..++... .+
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~--~~~~i~~~~~~lyv~~~-------~~~~v~viD~~t~~~~~~i~~~~-~p 86 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGD--VAQSMVIRDGIGWIVVN-------NSHVIFAIDINTFKEVGRITGFT-SP 86 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBS--CEEEEEEETTEEEEEEG-------GGTEEEEEETTTCCEEEEEECCS-SE
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCc--cceEEEEECCEEEEEEc-------CCCEEEEEECcccEEEEEcCCCC-CC
Confidence 6789999999887532100 111111 11256678999999864 246789999998875 3344332 22
Q ss_pred ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEe-C--CCCC-ccccccceEEECCEEEEEeeecCCCCCcc
Q 048803 157 RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWAS-L--PDMS-RERDECKAVFHCGKLLVIGGYSTNAQGRF 232 (289)
Q Consensus 157 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~--~~~~-~~~~~~~~~~~~~~l~~~gG~~~~~~~~~ 232 (289)
...+...++++|+.... ...+.++|+++++-.. + .... .......++..+++||+..- . .
T Consensus 87 ---~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~------~ 150 (328)
T 3dsm_A 87 ---RYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-S------Y 150 (328)
T ss_dssp ---EEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-T------T
T ss_pred ---cEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-C------C
Confidence 33443247899998642 2358999999886432 2 2200 00022344557889999852 0 1
Q ss_pred cceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 233 ERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 233 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
.+.|.++|+++++....-.. . ..+....+..++++|+...
T Consensus 151 ~~~v~viD~~t~~~~~~i~~--g--~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 151 QNRILKIDTETDKVVDELTI--G--IQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp CCEEEEEETTTTEEEEEEEC--S--SCBCCCEECTTSEEEEEBC
T ss_pred CCEEEEEECCCCeEEEEEEc--C--CCccceEEcCCCCEEEEEC
Confidence 14799999998875432211 1 1222223345688888764
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.58 E-value=0.0031 Score=49.41 Aligned_cols=112 Identities=14% Similarity=0.027 Sum_probs=74.4
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEE
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYD 190 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 190 (289)
.+...++.||+-.|..+ .+.+.++|+.|++-...-+++ ......+.+. .+++||+.... .+.+.+||
T Consensus 25 GL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~-~~~~ly~ltw~------~~~v~v~D 91 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAEVP-PPYFGAGIVA-WRDRLIQLTWR------NHEGFVYD 91 (243)
T ss_dssp EEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEECC-TTCCEEEEEE-ETTEEEEEESS------SSEEEEEE
T ss_pred cEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEeCC-CCcceeEEEE-eCCEEEEEEee------CCEEEEEE
Confidence 56677899999888642 467899999999876555555 2222344555 38999998432 24699999
Q ss_pred cCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 191 VARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 191 ~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
+++.+= +..++.+..+.+.+.-+++||+.-|. +.+..+|+++.+-
T Consensus 92 ~~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdgs---------~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 92 LATLTP--RARFRYPGEGWALTSDDSHLYMSDGT---------AVIRKLDPDTLQQ 136 (243)
T ss_dssp TTTTEE--EEEEECSSCCCEEEECSSCEEEECSS---------SEEEEECTTTCCE
T ss_pred CCcCcE--EEEEeCCCCceEEeeCCCEEEEECCC---------CeEEEEeCCCCeE
Confidence 987643 22233333445555556778888652 3689999998653
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.56 E-value=0.0093 Score=49.08 Aligned_cols=171 Identities=11% Similarity=0.019 Sum_probs=92.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCC--CCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFP--DGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~--~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.++|+.+++-...-++.... ...+. .++..++++|+.... ....+.++|+.+++....-+....+
T Consensus 105 ~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~--~i~~~~~~lyv~~~~------~~~~v~viD~~t~~~~~~i~~g~~p-- 174 (328)
T 3dsm_A 105 YRIFIINPKTYEITGYIECPDMDMESGSTE--QMVQYGKYVYVNCWS------YQNRILKIDTETDKVVDELTIGIQP-- 174 (328)
T ss_dssp SEEEEEETTTTEEEEEEECTTCCTTTCBCC--CEEEETTEEEEEECT------TCCEEEEEETTTTEEEEEEECSSCB--
T ss_pred CeEEEEECCCCeEEEEEEcCCccccCCCcc--eEEEECCEEEEEcCC------CCCEEEEEECCCCeEEEEEEcCCCc--
Confidence 57888999887754221222200 00111 344478999998421 2457899999998864332222122
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcc----cCceEEEEcCCCceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcc
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNA----LKSAMAYDVARDEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRF 232 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~ 232 (289)
.+....-+|++|+.......... ...+.++|+++++....-..+.......++.. ++.||+..+
T Consensus 175 -~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--------- 244 (328)
T 3dsm_A 175 -TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--------- 244 (328)
T ss_dssp -CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS---------
T ss_pred -cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc---------
Confidence 33444347898887543211111 25799999998875532223222222233343 466777642
Q ss_pred cceEEEEECCCCceeecccccccCCCCCCceeee--eCCeEEEEe
Q 048803 233 ERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV--DSNDLYMCR 275 (289)
Q Consensus 233 ~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~ly~~G 275 (289)
.++++|+++++...... .+.......+++. .+++||+..
T Consensus 245 --~v~~~d~~t~~~~~~~~--~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 245 --DIWRMPVEADRVPVRPF--LEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp --SEEEEETTCSSCCSSCS--BCCCSSCEEEEEECTTTCCEEEEE
T ss_pred --EEEEEECCCCceeeeee--ecCCCCceEEEEEcCCCCeEEEEc
Confidence 48899998887532221 1110111224443 378999997
No 28
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.40 E-value=0.025 Score=47.20 Aligned_cols=156 Identities=15% Similarity=0.190 Sum_probs=86.7
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCC-
Q 048803 81 YRITVLELGSGE--WSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGG- 155 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~- 155 (289)
..++++|+.+++ |+.-. +..... ..+..++.||+... ...++.+|+.+++ |+.-...+..
T Consensus 113 g~l~a~d~~tG~~~W~~~~--~~~~~~-----~p~~~~~~v~v~~~--------~g~l~~~d~~tG~~~W~~~~~~~~~~ 177 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKV--AGEALS-----RPVVSDGLVLIHTS--------NGQLQALNEADGAVKWTVNLDMPSLS 177 (376)
T ss_dssp SEEEEEETTTCCEEEEEEC--SSCCCS-----CCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEECCC----
T ss_pred CEEEEEECCCCCEEEEEeC--CCceEc-----CCEEECCEEEEEcC--------CCeEEEEECCCCcEEEEEeCCCCcee
Confidence 578999998776 65322 221111 23456788877532 3468899998876 8754332211
Q ss_pred CccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC--ceEeCCCCCccc--------cccceEEECCEEEEEeeec
Q 048803 156 RRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD--EWASLPDMSRER--------DECKAVFHCGKLLVIGGYS 225 (289)
Q Consensus 156 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~--------~~~~~~~~~~~l~~~gG~~ 225 (289)
.+....... .++.+|+. ..+ ..+..||++++ .|+.-...+... .....+..++.+|+.+. +
T Consensus 178 ~~~~~~~~~-~~~~v~~g-~~~------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~ 248 (376)
T 3q7m_A 178 LRGESAPTT-AFGAAVVG-GDN------GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-N 248 (376)
T ss_dssp -CCCCCCEE-ETTEEEEC-CTT------TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-T
T ss_pred ecCCCCcEE-ECCEEEEE-cCC------CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-C
Confidence 111122222 37777763 221 25899999876 487543322111 12344566888888642 1
Q ss_pred CCCCCcccceEEEEECCCC--ceeecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 226 TNAQGRFERHAEAFDAAAQ--QWGPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 226 ~~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
..+.++|+.++ .|+.-... ....+..++.||+...
T Consensus 249 --------g~l~~~d~~tG~~~w~~~~~~--------~~~~~~~~~~l~~~~~ 285 (376)
T 3q7m_A 249 --------GNLTALDLRSGQIMWKRELGS--------VNDFIVDGNRIYLVDQ 285 (376)
T ss_dssp --------SCEEEEETTTCCEEEEECCCC--------EEEEEEETTEEEEEET
T ss_pred --------cEEEEEECCCCcEEeeccCCC--------CCCceEECCEEEEEcC
Confidence 25899999876 47654221 1234556888888764
No 29
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.32 E-value=5.7e-05 Score=62.64 Aligned_cols=42 Identities=26% Similarity=0.435 Sum_probs=37.8
Q ss_pred CCCCCChHHHHHHHhhcCChhhHHHHHHHhhhHHhhhcChhH
Q 048803 2 DLIPDLPNEIALECLSRVSYKQFATISSVCKGWKSEISRPEF 43 (289)
Q Consensus 2 ~~~~~Lp~dl~~~il~~lp~~~l~~~~~v~k~W~~l~~~~~~ 43 (289)
..+..||+|++.+||.+|+.+++.+++.|||+|+.+..++..
T Consensus 7 ~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~ 48 (336)
T 2ast_B 7 VSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESL 48 (336)
T ss_dssp CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTT
T ss_pred CChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchh
Confidence 357899999999999999999999999999999999876553
No 30
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.10 E-value=0.072 Score=42.36 Aligned_cols=172 Identities=9% Similarity=0.073 Sum_probs=85.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE--eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA--VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||+.......++...........-..++. -++.+|+.+.. ....+.+||+....-+.+.... ...
T Consensus 51 ~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~------~~~~i~~~d~~g~~~~~~~~~~--~~~ 122 (286)
T 1q7f_A 51 HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS------PTHQIQIYNQYGQFVRKFGATI--LQH 122 (286)
T ss_dssp TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG------GGCEEEEECTTSCEEEEECTTT--CSC
T ss_pred CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC------CCCEEEEECCCCcEEEEecCcc--CCC
Confidence 4678888875443333321110000001113333 36789988642 1356888996544443333211 112
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECCEEEEEeeecCCCCCcccceEE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
..+.+..-++++|+..... ..+..||+.......+..........+.+. -+|++|+....+ +.|.
T Consensus 123 ~~~i~~~~~g~l~v~~~~~------~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~--------~~i~ 188 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECKV------MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA--------HCVK 188 (286)
T ss_dssp EEEEEECTTSCEEEEETTT------TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG--------TEEE
T ss_pred ceEEEEeCCCCEEEEECCC------CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC--------CEEE
Confidence 3445554478899875432 358889876554433321111011112222 258888876432 3689
Q ss_pred EEECCCCceeecccccccCCCCCCceee-eeCCeEEEEeCc
Q 048803 238 AFDAAAQQWGPVEEDFMETATCPRSCAG-VDSNDLYMCREG 277 (289)
Q Consensus 238 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~ly~~GG~ 277 (289)
+||+.......+... .....+. +++ ..+++||+.+..
T Consensus 189 ~~~~~g~~~~~~~~~--g~~~~p~-~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 189 VFNYEGQYLRQIGGE--GITNYPI-GVGINSNGEILIADNH 226 (286)
T ss_dssp EEETTCCEEEEESCT--TTSCSEE-EEEECTTCCEEEEECS
T ss_pred EEcCCCCEEEEEccC--CccCCCc-EEEECCCCCEEEEeCC
Confidence 999866544444321 1011222 233 346788888743
No 31
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.09 E-value=0.0002 Score=64.18 Aligned_cols=36 Identities=25% Similarity=0.449 Sum_probs=29.5
Q ss_pred CCCCCChHHHHHHHhhcCC-hhhHHHHHHHhhhHHhh
Q 048803 2 DLIPDLPNEIALECLSRVS-YKQFATISSVCKGWKSE 37 (289)
Q Consensus 2 ~~~~~Lp~dl~~~il~~lp-~~~l~~~~~v~k~W~~l 37 (289)
+.+..||||++..||.+|| .++..+++.|||+|+.+
T Consensus 4 d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 4 RIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 6789999999999999999 99999999999999988
No 32
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.06 E-value=0.1 Score=43.38 Aligned_cols=140 Identities=18% Similarity=0.187 Sum_probs=78.5
Q ss_pred eeEEEEECCCCC--eEeCCCCCCC---CCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCC
Q 048803 81 YRITVLELGSGE--WSELPPIPGF---PDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMP 153 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~---~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~ 153 (289)
..+++||+.+++ |+.-...... ..........+..++.||+... ...++.+|..+++ |+.-..-.
T Consensus 63 g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------~g~l~a~d~~tG~~~W~~~~~~~ 134 (376)
T 3q7m_A 63 GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--------KAQVYALNTSDGTVAWQTKVAGE 134 (376)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--------TSEEEEEETTTCCEEEEEECSSC
T ss_pred CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--------CCEEEEEECCCCCEEEEEeCCCc
Confidence 478899998766 6533221110 0011223356677888988632 3568899998875 76532211
Q ss_pred CCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc--eEeCCCCCc--cccccceEEECCEEEEEeeecCCCC
Q 048803 154 GGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE--WASLPDMSR--ERDECKAVFHCGKLLVIGGYSTNAQ 229 (289)
Q Consensus 154 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~--~~~~~~~~~~~~~l~~~gG~~~~~~ 229 (289)
. .....+ .++.+|+... ...+..||+++++ |+.-...+. .+.....+..++.+|+.. .+
T Consensus 135 --~--~~~p~~-~~~~v~v~~~-------~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~-~~---- 197 (376)
T 3q7m_A 135 --A--LSRPVV-SDGLVLIHTS-------NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGG-DN---- 197 (376)
T ss_dssp --C--CSCCEE-ETTEEEEECT-------TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECC-TT----
T ss_pred --e--EcCCEE-ECCEEEEEcC-------CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEc-CC----
Confidence 1 111222 3788887532 1258999998875 875432221 122244456688877632 11
Q ss_pred CcccceEEEEECCCC--ceeec
Q 048803 230 GRFERHAEAFDAAAQ--QWGPV 249 (289)
Q Consensus 230 ~~~~~~v~~yd~~~~--~W~~~ 249 (289)
..+..||+.++ .|+.-
T Consensus 198 ----g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 198 ----GRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp ----TEEEEEETTTCCEEEEEE
T ss_pred ----CEEEEEECCCCcEEEEEe
Confidence 36899999876 47654
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.01 E-value=0.0031 Score=49.95 Aligned_cols=111 Identities=10% Similarity=-0.000 Sum_probs=71.2
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEE
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYD 190 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 190 (289)
.+...++.||+..|..+ .+.+.++|+.|++-...-+++ +.....+.+. .+++||+.... .+.+.+||
T Consensus 47 GL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~-~g~~ly~ltw~------~~~v~v~D 113 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIELG-KRYFGEGISD-WKDKIVGLTWK------NGLGFVWN 113 (262)
T ss_dssp EEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEECC-TTCCEEEEEE-ETTEEEEEESS------SSEEEEEE
T ss_pred eEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEecC-CccceeEEEE-eCCEEEEEEee------CCEEEEEE
Confidence 45556889999888542 467899999999865444454 2222234555 38899998432 24699999
Q ss_pred cCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 191 VARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 191 ~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+++.+=. ..++.+..+.+.+.-+++||+.-|. +.+..+|+++.+
T Consensus 114 ~~t~~~~--~ti~~~~eG~glt~dg~~L~~SdGs---------~~i~~iDp~T~~ 157 (262)
T 3nol_A 114 IRNLRQV--RSFNYDGEGWGLTHNDQYLIMSDGT---------PVLRFLDPESLT 157 (262)
T ss_dssp TTTCCEE--EEEECSSCCCCEEECSSCEEECCSS---------SEEEEECTTTCS
T ss_pred CccCcEE--EEEECCCCceEEecCCCEEEEECCC---------CeEEEEcCCCCe
Confidence 9886532 2222222445555556678877652 368899998765
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.0088 Score=49.50 Aligned_cols=97 Identities=8% Similarity=0.102 Sum_probs=53.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--C--CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--G--PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~ 156 (289)
..+.+||.....+..+..+....... ..+.. . +.+++.|+.+ ..+.+||..+++|..+..+....
T Consensus 33 g~i~iw~~~~~~~~~~~~~~~h~~~v----~~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~~ 101 (379)
T 3jrp_A 33 KTIKIFEVEGETHKLIDTLTGHEGPV----WRVDWAHPKFGTILASCSYD-------GKVLIWKEENGRWSQIAVHAVHS 101 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCE----EEEEECCGGGCSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCS
T ss_pred CcEEEEecCCCcceeeeEecCCCCcE----EEEEeCCCCCCCEEEEeccC-------CEEEEEEcCCCceeEeeeecCCC
Confidence 45777887766555444333222211 22333 2 5666666643 45888999999876654443212
Q ss_pred ccceeEEEecC--CEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 157 RMLFGCASDGD--RTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 157 ~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
.....++..-+ +.++++|+.+. .+..||..+.
T Consensus 102 ~~v~~~~~~~~~~~~~l~~~~~d~------~i~v~d~~~~ 135 (379)
T 3jrp_A 102 ASVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKEN 135 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTS------EEEEEECCTT
T ss_pred cceEEEEeCCCCCCCEEEEecCCC------cEEEEecCCC
Confidence 22233333224 66777766543 4788888766
No 35
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.96 E-value=0.017 Score=45.85 Aligned_cols=108 Identities=12% Similarity=0.009 Sum_probs=70.1
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEE
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYD 190 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 190 (289)
.+...++.||+..|.. ..+.++|+.|++-...- ++ +.....+.+. .+++||+.... .+.+.+||
T Consensus 59 GL~~~~~~Ly~stG~~-------g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~-~g~~Ly~ltw~------~~~v~V~D 122 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQ-------GTLRQLSLESAQPVWME-RL-GNIFAEGLAS-DGERLYQLTWT------EGLLFTWS 122 (268)
T ss_dssp EEEEETTEEEEEETTT-------TEEEECCSSCSSCSEEE-EC-TTCCEEEEEE-CSSCEEEEESS------SCEEEEEE
T ss_pred eEEEECCEEEEEcCCC-------CEEEEEECCCCcEEeEE-CC-CCcceeEEEE-eCCEEEEEEcc------CCEEEEEE
Confidence 5666789999998854 22889999998743222 44 2222234554 48899998432 24699999
Q ss_pred cCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 191 VARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 191 ~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+++.+=. ..++.+..+.+.+.-+++||+.-|. +.+..+|+++.+
T Consensus 123 ~~Tl~~~--~ti~~~~eGwGLt~Dg~~L~vSdGs---------~~l~~iDp~T~~ 166 (268)
T 3nok_A 123 GMPPQRE--RTTRYSGEGWGLCYWNGKLVRSDGG---------TMLTFHEPDGFA 166 (268)
T ss_dssp TTTTEEE--EEEECSSCCCCEEEETTEEEEECSS---------SEEEEECTTTCC
T ss_pred CCcCcEE--EEEeCCCceeEEecCCCEEEEECCC---------CEEEEEcCCCCe
Confidence 9886432 2222223345666667889988652 378999999875
No 36
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.93 E-value=0.022 Score=44.55 Aligned_cols=104 Identities=14% Similarity=0.085 Sum_probs=69.9
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAF 239 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~y 239 (289)
++... .++.+|+..|..+. +.+..+|+++++=..--+++....+.+.+..+++||+....+ +.+++|
T Consensus 24 qGL~~-~~~~LyestG~~g~----S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~--------~~v~v~ 90 (243)
T 3mbr_X 24 EGLFY-LRGHLYESTGETGR----SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN--------HEGFVY 90 (243)
T ss_dssp EEEEE-ETTEEEEEECCTTS----CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--------SEEEEE
T ss_pred ccEEE-ECCEEEEECCCCCC----ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC--------CEEEEE
Confidence 45554 47899999886543 469999999987654445555445567778899999986443 479999
Q ss_pred ECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCceeec
Q 048803 240 DAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDVMA 281 (289)
Q Consensus 240 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~~~ 281 (289)
|+++.+ .+.....+ . ...+++.-+++||+.-|.+.+.
T Consensus 91 D~~tl~--~~~ti~~~--~-~Gwglt~dg~~L~vSdgs~~l~ 127 (243)
T 3mbr_X 91 DLATLT--PRARFRYP--G-EGWALTSDDSHLYMSDGTAVIR 127 (243)
T ss_dssp ETTTTE--EEEEEECS--S-CCCEEEECSSCEEEECSSSEEE
T ss_pred ECCcCc--EEEEEeCC--C-CceEEeeCCCEEEEECCCCeEE
Confidence 987755 33332122 1 2356776678899988855433
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.74 E-value=0.013 Score=48.50 Aligned_cols=173 Identities=10% Similarity=0.125 Sum_probs=85.7
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||..+++|.....+....... -..++. -+++.++.|+.+ ..+.+||..++.++.+..+.......
T Consensus 38 ~~i~iw~~~~~~~~~~~~~~~~h~~~--v~~~~~sp~g~~l~s~s~D-------~~v~iw~~~~~~~~~~~~~~~h~~~v 108 (345)
T 3fm0_A 38 RRIRIWGTEGDSWICKSVLSEGHQRT--VRKVAWSPCGNYLASASFD-------ATTCIWKKNQDDFECVTTLEGHENEV 108 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECSSCSSC--EEEEEECTTSSEEEEEETT-------SCEEEEEECCC-EEEEEEECCCSSCE
T ss_pred CeEEEEEcCCCcceeeeeeccccCCc--EEEEEECCCCCEEEEEECC-------CcEEEEEccCCCeEEEEEccCCCCCc
Confidence 56778888887764322221111111 012222 245666666644 34667787777665443333111112
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc-eEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE-WASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v 236 (289)
.+++..-++.+.+.|+.+. .+..+|..+.. +..+..+.........+. -++++++.|+.++ .+
T Consensus 109 ~~v~~sp~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~--------~i 174 (345)
T 3fm0_A 109 KSVAWAPSGNLLATCSRDK------SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD--------TV 174 (345)
T ss_dssp EEEEECTTSSEEEEEETTS------CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS--------CE
T ss_pred eEEEEeCCCCEEEEEECCC------eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC--------cE
Confidence 2333323677777777654 37888887642 332221111111111122 2567777776653 57
Q ss_pred EEEECCCCceeecccccccCCCCCCcee-eeeCCeEEEEeCce
Q 048803 237 EAFDAAAQQWGPVEEDFMETATCPRSCA-GVDSNDLYMCREGD 278 (289)
Q Consensus 237 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~~ly~~GG~~ 278 (289)
..||..++.|..+..+. .......++ ...+++.++.|+.|
T Consensus 175 ~~w~~~~~~~~~~~~~~--~h~~~v~~l~~sp~g~~l~s~s~D 215 (345)
T 3fm0_A 175 KLYREEEDDWVCCATLE--GHESTVWSLAFDPSGQRLASCSDD 215 (345)
T ss_dssp EEEEEETTEEEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEecCCCEEEEEEec--CCCCceEEEEECCCCCEEEEEeCC
Confidence 88998888876554321 111111122 23467777777654
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.72 E-value=0.027 Score=46.43 Aligned_cols=138 Identities=12% Similarity=0.211 Sum_probs=72.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEE-EeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLS-AVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||..++++..+..+....... ..++ .-+++.++.|+.+ ..+.+||..++++.....+.......
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~v 99 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEHNGQV---TGVDWAPDSNRIVTCGTD-------RNAYVWTLKGRTWKPTLVILRINRAA 99 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECCSSCE---EEEEEETTTTEEEEEETT-------SCEEEEEEETTEEEEEEECCCCSSCE
T ss_pred CEEEEEeCCCCcEEeeeeecCCCCcc---cEEEEeCCCCEEEEEcCC-------CeEEEEECCCCeeeeeEEeecCCCce
Confidence 57888999888765544443222211 1222 2245666666533 45888999888876543322112222
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc-eEeCCCCCcccc-ccceEEE--CCEEEEEeeecCCCCCcccce
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE-WASLPDMSRERD-ECKAVFH--CGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~-~~~~~~~--~~~l~~~gG~~~~~~~~~~~~ 235 (289)
..++..-++..+++|+.+. .+..||..+.. |........++. ....+.+ +++.++.|+.++ .
T Consensus 100 ~~~~~~~~~~~l~~~~~d~------~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~ 165 (372)
T 1k8k_C 100 RCVRWAPNEKKFAVGSGSR------VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF--------K 165 (372)
T ss_dssp EEEEECTTSSEEEEEETTS------SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS--------C
T ss_pred eEEEECCCCCEEEEEeCCC------EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC--------C
Confidence 3333333666777766443 37777777653 432222211211 1122222 567777776543 5
Q ss_pred EEEEECC
Q 048803 236 AEAFDAA 242 (289)
Q Consensus 236 v~~yd~~ 242 (289)
+..||..
T Consensus 166 i~~~d~~ 172 (372)
T 1k8k_C 166 CRIFSAY 172 (372)
T ss_dssp EEEEECC
T ss_pred EEEEEcc
Confidence 7888864
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.72 E-value=0.033 Score=47.55 Aligned_cols=138 Identities=10% Similarity=0.102 Sum_probs=71.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE--eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA--VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||..+++-..+..+....... .+++. .++.+++.|+.+ ..+.+||..++..+.+.........
T Consensus 142 g~i~lWd~~~~~~~~~~~~~gH~~~V---~~l~f~p~~~~~l~s~s~D-------~~v~iwd~~~~~~~~~~~~~~~~~~ 211 (435)
T 4e54_B 142 GDIMLWNFGIKDKPTFIKGIGAGGSI---TGLKFNPLNTNQFYASSME-------GTTRLQDFKGNILRVFASSDTINIW 211 (435)
T ss_dssp SCEEEECSSCCSCCEEECCCSSSCCC---CEEEECSSCTTEEEEECSS-------SCEEEEETTSCEEEEEECCSSCSCC
T ss_pred CEEEEEECCCCCceeEEEccCCCCCE---EEEEEeCCCCCEEEEEeCC-------CEEEEeeccCCceeEEeccCCCCcc
Confidence 56888998776543322221111111 12333 245566666654 3477889888766554332211222
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE---CCEEEEEeeecCCCCCcccce
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH---CGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~~~gG~~~~~~~~~~~~ 235 (289)
..+.+..-++.+++.|+.+. .+..+|..... +..+.........+.+ ++.+++.|+.++ .
T Consensus 212 ~~~~~~~~~~~~l~~g~~dg------~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~--------~ 274 (435)
T 4e54_B 212 FCSLDVSASSRMVVTGDNVG------NVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVDQ--------T 274 (435)
T ss_dssp CCCEEEETTTTEEEEECSSS------BEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETTS--------B
T ss_pred EEEEEECCCCCEEEEEeCCC------cEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCcc--------e
Confidence 23344334777888887554 48888887543 2222211111222222 334666776543 4
Q ss_pred EEEEECCCCc
Q 048803 236 AEAFDAAAQQ 245 (289)
Q Consensus 236 v~~yd~~~~~ 245 (289)
|.+||..+.+
T Consensus 275 v~iwd~~~~~ 284 (435)
T 4e54_B 275 VKIWDLRQVR 284 (435)
T ss_dssp CCEEETTTCC
T ss_pred eeEEeccccc
Confidence 7788987654
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.70 E-value=0.13 Score=40.89 Aligned_cols=162 Identities=9% Similarity=-0.017 Sum_probs=82.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.++|+ +++...... +.... . -..++.. ++.+|+... ....+++||+ +++........ .....
T Consensus 120 ~~i~~~d~-~g~~~~~~~-~~~~~-~--~~~i~~~~~g~l~v~~~-------~~~~i~~~~~-~g~~~~~~~~~-~~~~~ 185 (299)
T 2z2n_A 120 NRIGRITD-DGKIREYEL-PNKGS-Y--PSFITLGSDNALWFTEN-------QNNAIGRITE-SGDITEFKIPT-PASGP 185 (299)
T ss_dssp TEEEEECT-TCCEEEEEC-SSTTC-C--EEEEEECTTSCEEEEET-------TTTEEEEECT-TCCEEEEECSS-TTCCE
T ss_pred ceEEEECC-CCCEEEecC-CCCCC-C--CceEEEcCCCCEEEEeC-------CCCEEEEEcC-CCcEEEeeCCC-CCCcc
Confidence 46777888 555443321 11111 1 1133333 568888642 2356889999 77766542111 11122
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
.+.+..-++.+|+.... ...+..||+ +++..... .+........+.+ +|+||+..... +.+.
T Consensus 186 ~~i~~~~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~ 249 (299)
T 2z2n_A 186 VGITKGNDDALWFVEII------GNKIGRITT-SGEITEFK-IPTPNARPHAITAGAGIDLWFTEWGA--------NKIG 249 (299)
T ss_dssp EEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTCEEEEETTT--------TEEE
T ss_pred eeEEECCCCCEEEEccC------CceEEEECC-CCcEEEEE-CCCCCCCceeEEECCCCCEEEeccCC--------ceEE
Confidence 34444346788887432 235889999 77766532 1111112222222 57888875221 3689
Q ss_pred EEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 238 AFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 238 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
+||+ +++...+.. ......+. +++..+++||+.+.
T Consensus 250 ~~d~-~g~~~~~~~--~~~~~~~~-~i~~~~g~l~v~~~ 284 (299)
T 2z2n_A 250 RLTS-NNIIEEYPI--QIKSAEPH-GICFDGETIWFAME 284 (299)
T ss_dssp EEET-TTEEEEEEC--SSSSCCEE-EEEECSSCEEEEET
T ss_pred EECC-CCceEEEeC--CCCCCccc-eEEecCCCEEEEec
Confidence 9998 444444322 11111222 33336888998864
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.67 E-value=0.11 Score=41.37 Aligned_cols=138 Identities=8% Similarity=0.095 Sum_probs=71.9
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
++++|+.... ...+.+||+.......+.... ......+.+..-++.+|+.... ...+.+||+....
T Consensus 131 ~g~l~v~~~~-------~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~ 196 (286)
T 1q7f_A 131 KGRIIVVECK-------VMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFISDNR------AHCVKVFNYEGQY 196 (286)
T ss_dssp TSCEEEEETT-------TTEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEEEGG------GTEEEEEETTCCE
T ss_pred CCCEEEEECC-------CCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEEECC------CCEEEEEcCCCCE
Confidence 5678887542 356888998665544442211 1112344555447889987542 2358999986654
Q ss_pred eEeCCCCCccccccceEE-ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEE
Q 048803 196 WASLPDMSRERDECKAVF-HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMC 274 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~ 274 (289)
-..+..........+++. -+|++|+....+. ..|.+||+....-..+... .....+...+...+++||+.
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~-------~~i~~~~~~g~~~~~~~~~--~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSNGEILIADNHNN-------FNLTIFTQDGQLISALESK--VKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTTCCEEEEECSSS-------CEEEEECTTSCEEEEEEES--SCCSCEEEEEEETTTEEEEE
T ss_pred EEEEccCCccCCCcEEEECCCCCEEEEeCCCC-------EEEEEECCCCCEEEEEccc--CCCCcceeEEECCCCcEEEE
Confidence 443322110011112222 2678888864321 1689999765544444321 11111222233457889988
Q ss_pred eC
Q 048803 275 RE 276 (289)
Q Consensus 275 GG 276 (289)
..
T Consensus 268 ~~ 269 (286)
T 1q7f_A 268 SK 269 (286)
T ss_dssp ET
T ss_pred CC
Confidence 64
No 42
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.65 E-value=0.011 Score=46.69 Aligned_cols=111 Identities=10% Similarity=0.000 Sum_probs=69.2
Q ss_pred CCCCCccc-eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCC
Q 048803 152 MPGGRRML-FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQG 230 (289)
Q Consensus 152 ~~~~~~~~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~ 230 (289)
.|+.++.+ .+.... ++.+|+..|..+. +.+.++|++|++=..--+++....+.+.+..+++||+....+
T Consensus 37 ~phd~~~ftqGL~~~-~~~LyestG~~g~----S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~----- 106 (262)
T 3nol_A 37 YPHDTKAFTEGFFYR-NGYFYESTGLNGR----SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN----- 106 (262)
T ss_dssp EECCTTCEEEEEEEE-TTEEEEEEEETTE----EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----
T ss_pred ecCCCCcccceEEEE-CCEEEEECCCCCC----ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----
Confidence 34334332 445543 8899999886542 468999999987543334444434556777899999996543
Q ss_pred cccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCceee
Q 048803 231 RFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDVM 280 (289)
Q Consensus 231 ~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~~ 280 (289)
+.+.+||+++.+- +.....+. ...+++.-+++||+..|.+.+
T Consensus 107 ---~~v~v~D~~t~~~--~~ti~~~~---eG~glt~dg~~L~~SdGs~~i 148 (262)
T 3nol_A 107 ---GLGFVWNIRNLRQ--VRSFNYDG---EGWGLTHNDQYLIMSDGTPVL 148 (262)
T ss_dssp ---SEEEEEETTTCCE--EEEEECSS---CCCCEEECSSCEEECCSSSEE
T ss_pred ---CEEEEEECccCcE--EEEEECCC---CceEEecCCCEEEEECCCCeE
Confidence 4799999987653 22211111 223566656778888775443
No 43
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.64 E-value=0.15 Score=39.94 Aligned_cols=162 Identities=17% Similarity=0.073 Sum_probs=80.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||+.+......+.... .... .++.. ++.||+... ...+.+||+.+.......... ....
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~-~~p~----~i~~~~~g~l~v~~~--------~~~i~~~d~~~~~~~~~~~~~--~~~p 110 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL-YQPQ----GLAVDGAGTVYVTDF--------NNRVVTLAAGSNNQTVLPFDG--LNYP 110 (270)
T ss_dssp CEEEEECC-----EECCCCSC-CSCC----CEEECTTCCEEEEET--------TTEEEEECTTCSCCEECCCCS--CSSE
T ss_pred CcEEEecCCCcccceEeeCCc-CCcc----eeEECCCCCEEEEcC--------CCEEEEEeCCCceEeeeecCC--cCCC
Confidence 467788887766544432111 1111 33333 567888754 245888998876654443211 1223
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CCEEEEEeeecCCCCCcccceEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CGKLLVIGGYSTNAQGRFERHAEA 238 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~v~~ 238 (289)
.+.+..-++++|+.... ...+..||..+.......... .......+.- +|++|+..... +.|.+
T Consensus 111 ~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~--------~~i~~ 175 (270)
T 1rwi_B 111 EGLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTDN--------NRVVK 175 (270)
T ss_dssp EEEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCS-CCSCCCEEECTTCCEEEEEGGG--------TEEEE
T ss_pred cceEECCCCCEEEEECC------CCEEEEEECCCceeEeecccc-CCCceeEEEeCCCCEEEEECCC--------CEEEE
Confidence 44555447889987432 234788877665543322111 1111223332 57888876432 36899
Q ss_pred EECCCCceeecccccccCCCCCCceeee-eCCeEEEEeC
Q 048803 239 FDAAAQQWGPVEEDFMETATCPRSCAGV-DSNDLYMCRE 276 (289)
Q Consensus 239 yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ly~~GG 276 (289)
||+.+..-...... ....+ .+++. .++.||+...
T Consensus 176 ~~~~~~~~~~~~~~---~~~~p-~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 176 LEAESNNQVVLPFT---DITAP-WGIAVDEAGTVYVTEH 210 (270)
T ss_dssp ECTTTCCEEECCCS---SCCSE-EEEEECTTCCEEEEET
T ss_pred EecCCCceEeeccc---CCCCc-eEEEECCCCCEEEEEC
Confidence 99887654333211 11112 23333 3568888863
No 44
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.59 E-value=0.02 Score=47.09 Aligned_cols=174 Identities=15% Similarity=0.073 Sum_probs=83.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
..++.+|+.+++...+.......... .....-+++||+.+... ....+++||..+++++.+...........
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~---~~a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~~~~p~ 89 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPT---YLALSAKDCLYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAPGTPPA 89 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCC---CEEECTTCEEEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEESCCCS
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcc---eEEEccCCeEEEEEecC-----CCceEEEEEecCCcEEEeeeeecCCCCCE
Confidence 46788888888876543222111111 02223367787775321 13568899998888766544211111122
Q ss_pred eEEEecCC-EEEEEcCCCCCCcccCceEEEEcC-CCceEeCCCC------Ccccc---ccc-eEE-ECCEEEEEeeecCC
Q 048803 161 GCASDGDR-TVYVAGGHDEDKNALKSAMAYDVA-RDEWASLPDM------SRERD---ECK-AVF-HCGKLLVIGGYSTN 227 (289)
Q Consensus 161 ~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~~~~~------~~~~~---~~~-~~~-~~~~l~~~gG~~~~ 227 (289)
..+..-++ .+|+.+..+ ..+..||+. +.....+... |.++. ... .+. -+|++|+.+...
T Consensus 90 ~~a~spdg~~l~~~~~~~------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-- 161 (347)
T 3hfq_A 90 YVAVDEARQLVYSANYHK------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-- 161 (347)
T ss_dssp EEEEETTTTEEEEEETTT------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT--
T ss_pred EEEECCCCCEEEEEeCCC------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC--
Confidence 33433455 466664321 247778874 3333322211 11111 111 222 267766654321
Q ss_pred CCCcccceEEEEECC-CCceeecccccccCCCCCCceeeeeCCe-EEEEeC
Q 048803 228 AQGRFERHAEAFDAA-AQQWGPVEEDFMETATCPRSCAGVDSND-LYMCRE 276 (289)
Q Consensus 228 ~~~~~~~~v~~yd~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~-ly~~GG 276 (289)
+.+.+||.. +++...+.....+....+...++..+++ ||+.+.
T Consensus 162 ------~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 162 ------DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp ------TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred ------CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 368889987 5665544322111111222223344565 666643
No 45
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.59 E-value=0.011 Score=48.82 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=73.2
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+++++++|+. ...+.+||..+++++.+..+.........++..-++.+++.|+.+. .+..||..+++
T Consensus 19 ~~~~l~~~~~-------d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~ 85 (372)
T 1k8k_C 19 DRTQIAICPN-------NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR------NAYVWTLKGRT 85 (372)
T ss_dssp TSSEEEEECS-------SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS------CEEEEEEETTE
T ss_pred CCCEEEEEeC-------CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC------eEEEEECCCCe
Confidence 4566666653 3558889999887665544432222223344333677777776543 48889998887
Q ss_pred eEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCc-eeecccccccCCCCCCcee-eeeCCeE
Q 048803 196 WASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ-WGPVEEDFMETATCPRSCA-GVDSNDL 271 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~-~~~~~~l 271 (289)
+.....+.........+.+ +++.+++|+.++ .+..||..+.. |........+.. ....++ ...++++
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQENDWWVCKHIKKPIR-STVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEETTTTEEEEEEECTTCC-SCEEEEEECTTSSE
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecCCCcceeeeeeecccC-CCeeEEEEcCCCCE
Confidence 6544322211111222222 567777776542 46777776653 333322111111 111122 2336667
Q ss_pred EEEeCce
Q 048803 272 YMCREGD 278 (289)
Q Consensus 272 y~~GG~~ 278 (289)
++.|+.+
T Consensus 157 l~~~~~d 163 (372)
T 1k8k_C 157 LAAGSCD 163 (372)
T ss_dssp EEEEETT
T ss_pred EEEEcCC
Confidence 7776644
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.48 E-value=0.15 Score=40.49 Aligned_cols=161 Identities=9% Similarity=0.086 Sum_probs=81.8
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+..||+. ++..... ++..... -..++.. ++.+|+.... ...+.+||+. ++..... ++......
T Consensus 83 ~~v~~~d~~-g~~~~~~-~~~~~~~---~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~-~~~~~~~~ 148 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYP-LPQPDSG---PYGITEGLNGDIWFTQLN-------GDRIGKLTAD-GTIYEYD-LPNKGSYP 148 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCC---EEEEEECSTTCEEEEETT-------TTEEEEECTT-SCEEEEE-CSSTTCCE
T ss_pred CeEEEECCC-CCeEEec-CCCCCCC---CccceECCCCCEEEEccC-------CCeEEEECCC-CCEEEcc-CCCCCCCc
Confidence 467888888 6665432 1211111 1133332 5788887431 3468889987 6654332 11111223
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
.+.+...++++|+.... ...+..||+ +++...+. .+..........+ +|+||+..... +.+.
T Consensus 149 ~~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~--------~~i~ 212 (300)
T 2qc5_A 149 AFITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIMG--------NKIG 212 (300)
T ss_dssp EEEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT--------TEEE
T ss_pred eeEEECCCCCEEEEecC------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccCC--------CEEE
Confidence 44454346788887432 135888998 66665432 1111112222222 57888865321 3688
Q ss_pred EEECCCCceeecccccccCCCCCCceee-eeCCeEEEEe
Q 048803 238 AFDAAAQQWGPVEEDFMETATCPRSCAG-VDSNDLYMCR 275 (289)
Q Consensus 238 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~ly~~G 275 (289)
+||+ +++...... +.....+ .+++ ..+++||+..
T Consensus 213 ~~~~-~g~~~~~~~--~~~~~~~-~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 213 RITT-TGEISEYDI--PTPNARP-HAITAGKNSEIWFTE 247 (300)
T ss_dssp EECT-TCCEEEEEC--SSTTCCE-EEEEECSTTCEEEEE
T ss_pred EEcC-CCcEEEEEC--CCCCCCc-eEEEECCCCCEEEec
Confidence 9998 566655432 1111122 2333 2467788886
No 47
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.48 E-value=0.066 Score=42.61 Aligned_cols=111 Identities=14% Similarity=0.046 Sum_probs=67.2
Q ss_pred EEEEeC-CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEE
Q 048803 111 QLSAVG-PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAY 189 (289)
Q Consensus 111 ~~~~~~-~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 189 (289)
.+.... +.||+..|.. ..+.+.++|+.|++-...-+++ ......+.+.. ++++|+..-. .+.+.+|
T Consensus 25 Gl~~~~dg~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~-~~~fgeGi~~~-g~~lyv~t~~------~~~v~vi 91 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLY-----GRSSVRQVALQTGKVENIHKMD-DSYFGEGLTLL-NEKLYQVVWL------KNIGFIY 91 (266)
T ss_dssp EEEECSTTEEEEEECST-----TTCEEEEEETTTCCEEEEEECC-TTCCEEEEEEE-TTEEEEEETT------CSEEEEE
T ss_pred cEEEeCCCeEEEECCCC-----CCCEEEEEECCCCCEEEEEecC-CCcceEEEEEe-CCEEEEEEec------CCEEEEE
Confidence 444445 7999987742 2467999999999865443333 12222345553 7899998432 2469999
Q ss_pred EcCCCceEeCCCCCcc-ccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 190 DVARDEWASLPDMSRE-RDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 190 d~~~~~W~~~~~~~~~-~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
|+++.+ .+..++.+ ..+.+.+.-++++|+..|. +.+..+|+++.+
T Consensus 92 D~~t~~--v~~~i~~g~~~g~glt~Dg~~l~vs~gs---------~~l~viD~~t~~ 137 (266)
T 2iwa_A 92 DRRTLS--NIKNFTHQMKDGWGLATDGKILYGSDGT---------SILYEIDPHTFK 137 (266)
T ss_dssp ETTTTE--EEEEEECCSSSCCEEEECSSSEEEECSS---------SEEEEECTTTCC
T ss_pred ECCCCc--EEEEEECCCCCeEEEEECCCEEEEECCC---------CeEEEEECCCCc
Confidence 998763 22222222 1223333335678876531 378999998865
No 48
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.47 E-value=0.15 Score=40.44 Aligned_cols=162 Identities=9% Similarity=0.046 Sum_probs=81.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+..||+. ++...... +..... -..++. -++.+|+.... ...+.+||+. ++.+.... +......
T Consensus 36 ~~v~~~d~~-~~~~~~~~-~~~~~~---~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~~-~~~~~~~ 101 (299)
T 2z2n_A 36 NMISCINLD-GKITEYPL-PTPDAK---VMCLTISSDGEVWFTENA-------ANKIGRITKK-GIIKEYTL-PNPDSAP 101 (299)
T ss_dssp TEEEEECTT-CCEEEEEC-SSTTCC---EEEEEECTTSCEEEEETT-------TTEEEEECTT-SCEEEEEC-SSTTCCE
T ss_pred CcEEEEcCC-CCeEEecC-CcccCc---eeeEEECCCCCEEEeCCC-------CCeEEEECCC-CcEEEEeC-CCcCCCc
Confidence 467889988 76655432 111111 113333 35688887431 3458888886 45544331 1112223
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CCEEEEEeeecCCCCCcccceEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CGKLLVIGGYSTNAQGRFERHAEA 238 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~v~~ 238 (289)
.+.+..-++.+|+..... ..+..||+ +++................+.- +|++|+.... .+.+.+
T Consensus 102 ~~i~~~~~g~l~v~~~~~------~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~ 166 (299)
T 2z2n_A 102 YGITEGPNGDIWFTEMNG------NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ--------NNAIGR 166 (299)
T ss_dssp EEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT--------TTEEEE
T ss_pred eeeEECCCCCEEEEecCC------ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC--------CCEEEE
Confidence 445543468899875332 24888988 5555433211111111222222 5788886521 136899
Q ss_pred EECCCCceeecccccccCCCCCCceee-eeCCeEEEEe
Q 048803 239 FDAAAQQWGPVEEDFMETATCPRSCAG-VDSNDLYMCR 275 (289)
Q Consensus 239 yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~ly~~G 275 (289)
||+ +++...+.. ......+ .+++ ..+++||+..
T Consensus 167 ~~~-~g~~~~~~~--~~~~~~~-~~i~~~~~g~l~v~~ 200 (299)
T 2z2n_A 167 ITE-SGDITEFKI--PTPASGP-VGITKGNDDALWFVE 200 (299)
T ss_dssp ECT-TCCEEEEEC--SSTTCCE-EEEEECTTSSEEEEE
T ss_pred EcC-CCcEEEeeC--CCCCCcc-eeEEECCCCCEEEEc
Confidence 999 777665422 1111112 2333 2357788876
No 49
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.43 E-value=0.027 Score=46.46 Aligned_cols=138 Identities=12% Similarity=0.117 Sum_probs=69.8
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-C--CEEEEEeCcCCCCcccccceEEEEccCCeE---EeCCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-G--PELVVIGGLDLTTWEASSSVFVFNIISATW---RRGADMPG 154 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W---~~~~~~~~ 154 (289)
..+.+||..+++|..+..+....... ..++.. + +.++++|+.+ ..+.+||..+..- ..+....
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~~~~~~~~~~~~- 147 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASV---NSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHA- 147 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCE---EEEEECCGGGCSEEEEEETT-------SEEEEEECCTTSCCCEEEEECCT-
T ss_pred CEEEEEEcCCCceeEeeeecCCCcce---EEEEeCCCCCCCEEEEecCC-------CcEEEEecCCCCceeeEEecCCC-
Confidence 46788998888776554443222211 122222 2 4566666533 4577888776531 1111111
Q ss_pred CCccceeEEEec-------------CCEEEEEcCCCCCCcccCceEEEEcCCCc--eEeCCCCCccccccceEEE--C--
Q 048803 155 GRRMLFGCASDG-------------DRTVYVAGGHDEDKNALKSAMAYDVARDE--WASLPDMSRERDECKAVFH--C-- 215 (289)
Q Consensus 155 ~~~~~~~~~~~~-------------~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~--~-- 215 (289)
......+..- ++.+++.|+.+. .+..||..+.. +..+..+.........+.+ +
T Consensus 148 --~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 219 (379)
T 3jrp_A 148 --IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 219 (379)
T ss_dssp --TCEEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred --CceEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCC
Confidence 1112222211 366777776543 37888886543 4433322211111222222 4
Q ss_pred -CEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 216 -GKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 216 -~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+++++.|+.++ .+.+||..+..
T Consensus 220 ~~~~l~s~~~dg--------~i~iwd~~~~~ 242 (379)
T 3jrp_A 220 LRSYLASVSQDR--------TCIIWTQDNEQ 242 (379)
T ss_dssp SSEEEEEEETTS--------CEEEEEESSTT
T ss_pred CCCeEEEEeCCC--------EEEEEeCCCCC
Confidence 78888887653 57888887763
No 50
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.33 E-value=0.063 Score=43.42 Aligned_cols=107 Identities=16% Similarity=0.225 Sum_probs=55.8
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+++.+++|+. ...+.+||..+.+......+..........+..-++..++.|+.+. .+..||..+.+
T Consensus 108 ~~~~l~~~~~-------d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------~v~~~d~~~~~ 174 (337)
T 1gxr_A 108 DGCTLIVGGE-------ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG------NIAVWDLHNQT 174 (337)
T ss_dssp TSSEEEEEES-------SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTE
T ss_pred CCCEEEEEcC-------CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC------cEEEEeCCCCc
Confidence 4555666653 2458889998877443332221111122333323666666666443 48899998775
Q ss_pred eEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 196 WASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
-...-... ......+.+ +++.++.++.+ ..+..||..+.+
T Consensus 175 ~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~~~ 216 (337)
T 1gxr_A 175 LVRQFQGH--TDGASCIDISNDGTKLWTGGLD--------NTVRSWDLREGR 216 (337)
T ss_dssp EEEEECCC--SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTTTE
T ss_pred eeeeeecc--cCceEEEEECCCCCEEEEEecC--------CcEEEEECCCCc
Confidence 43221111 111122222 66677777654 368899988765
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.32 E-value=0.31 Score=39.10 Aligned_cols=137 Identities=15% Similarity=0.215 Sum_probs=67.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEE-eCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWR-RGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~ 159 (289)
..+.+||..+++-... +...... .......-++.+++.|+.+ ..+.+||..+++-. .+.... .+ .
T Consensus 87 ~~i~vwd~~~~~~~~~--~~~~~~~--v~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~-~~--v 152 (312)
T 4ery_A 87 KTLKIWDVSSGKCLKT--LKGHSNY--VFCCNFNPQSNLIVSGSFD-------ESVRIWDVKTGKCLKTLPAHS-DP--V 152 (312)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSC--EEEEEECSSSSEEEEEETT-------SCEEEEETTTCCEEEEECCCS-SC--E
T ss_pred CEEEEEECCCCcEEEE--EcCCCCC--EEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCEEEEEecCCC-Cc--E
Confidence 5678888877653221 1111111 0011112244566666643 45788998876532 222211 11 2
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEe-CCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWAS-LPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEA 238 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~ 238 (289)
...+..-++.+++.|+.+. .+..||..+.+-.. +..............-+++.++.|+.+ +.+..
T Consensus 153 ~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d--------~~i~i 218 (312)
T 4ery_A 153 SAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD--------NTLKL 218 (312)
T ss_dssp EEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT--------TEEEE
T ss_pred EEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC--------CeEEE
Confidence 2233323677777776544 38899998765422 111110100011112256666666654 36889
Q ss_pred EECCCCc
Q 048803 239 FDAAAQQ 245 (289)
Q Consensus 239 yd~~~~~ 245 (289)
||..+.+
T Consensus 219 wd~~~~~ 225 (312)
T 4ery_A 219 WDYSKGK 225 (312)
T ss_dssp EETTTTE
T ss_pred EECCCCc
Confidence 9987765
No 52
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.026 Score=52.11 Aligned_cols=98 Identities=8% Similarity=0.121 Sum_probs=55.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eC--CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VG--PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~--~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~ 157 (289)
..+.+||...+++..+..+....... .++.. .. +..++.|+.+ ..+.+||..+++|.....+.....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~~~V---~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~~~~~~~~~~~~~~h~~ 100 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHEGPV---WRVDWAHPKFGTILASCSYD-------GKVLIWKEENGRWSQIAVHAVHSA 100 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCSSCE---EEEEECCTTSCSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSS
T ss_pred CcEEEEecCCCCCccceeccCCcCce---EEEEecCCCCCCEEEEEeCC-------CeEEEEECCCCcccccccccCCCC
Confidence 46778888766666554443322211 12222 22 5666666643 458889999998766544432222
Q ss_pred cceeEEEecC--CEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 158 MLFGCASDGD--RTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 158 ~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
....++..-+ +.++++|+.+. .+..||..+.
T Consensus 101 ~V~~v~~sp~~~~~~l~sgs~dg------~I~vwdl~~~ 133 (753)
T 3jro_A 101 SVNSVQWAPHEYGPLLLVASSDG------KVSVVEFKEN 133 (753)
T ss_dssp CEEEEEECCGGGCSEEEEEETTS------EEEEEECCSS
T ss_pred CeEEEEECCCCCCCEEEEEeCCC------cEEEEEeecC
Confidence 2223333224 67777776543 4788888765
No 53
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.28 E-value=0.0064 Score=50.63 Aligned_cols=141 Identities=11% Similarity=0.077 Sum_probs=69.0
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
++++++.|+.+ ..+.+||..++.|+.+..+.........++..-++.+.+.|+.+. .+..||..++.
T Consensus 22 ~g~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~------~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTTTAT-------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR------NAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECCCSS-------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS------SEEEC------
T ss_pred CCCEEEEecCC-------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC------eEEEEEcCCCC
Confidence 45566666533 457789999998888777653222223333333667777776543 48889988876
Q ss_pred -eEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCc-eeecccccccCCCCCCcee-eeeCCe
Q 048803 196 -WASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ-WGPVEEDFMETATCPRSCA-GVDSND 270 (289)
Q Consensus 196 -W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~-~~~~~~ 270 (289)
|.....+.........+.+ +++.++.|+.++ .+..||..+++ |..+.....+.. ....++ ...+++
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR--------VISVCYFEQENDWWVSKHLKRPLR-STILSLDWHPNNV 159 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS--------CEEECCC-----CCCCEEECSSCC-SCEEEEEECTTSS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCC--------eEEEEEECCcccceeeeEeecccC-CCeEEEEEcCCCC
Confidence 5433222211111122222 567777776543 57888887764 544433211111 111122 234667
Q ss_pred EEEEeCce
Q 048803 271 LYMCREGD 278 (289)
Q Consensus 271 ly~~GG~~ 278 (289)
+++.|+.|
T Consensus 160 ~l~~~~~d 167 (377)
T 3dwl_C 160 LLAAGCAD 167 (377)
T ss_dssp EEEEEESS
T ss_pred EEEEEeCC
Confidence 77777654
No 54
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.27 E-value=0.1 Score=40.89 Aligned_cols=164 Identities=16% Similarity=0.092 Sum_probs=83.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||+..+....+.... ...+ ..++.. +++||+.... ...+.+++..+.......... ....
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~---~~~p--~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~~~~~~~~--~~~p 152 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDG---LNYP--EGLAVDTQGAVYVADRG-------NNRVVKLAAGSKTQTVLPFTG--LNDP 152 (270)
T ss_dssp TEEEEECTTCSCCEECCCCS---CSSE--EEEEECTTCCEEEEEGG-------GTEEEEECTTCCSCEECCCCS--CCSC
T ss_pred CEEEEEeCCCceEeeeecCC---cCCC--cceEECCCCCEEEEECC-------CCEEEEEECCCceeEeecccc--CCCc
Confidence 46777887766544432211 0111 133333 5678887432 345788877665543322111 1122
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
.+.+..-++++|+.... ...+..||+.+..-........ .......+ +|.||+..... +.|.
T Consensus 153 ~~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~g~l~v~~~~~--------~~v~ 216 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTD------NNRVVKLEAESNNQVVLPFTDI--TAPWGIAVDEAGTVYVTEHNT--------NQVV 216 (270)
T ss_dssp CCEEECTTCCEEEEEGG------GTEEEEECTTTCCEEECCCSSC--CSEEEEEECTTCCEEEEETTT--------SCEE
T ss_pred eeEEEeCCCCEEEEECC------CCEEEEEecCCCceEeecccCC--CCceEEEECCCCCEEEEECCC--------CcEE
Confidence 34555346889987432 2358999988765433221111 11222232 46888875322 3589
Q ss_pred EEECCCCceeecccccccCCCCCCceee-eeCCeEEEEeCce
Q 048803 238 AFDAAAQQWGPVEEDFMETATCPRSCAG-VDSNDLYMCREGD 278 (289)
Q Consensus 238 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~~ly~~GG~~ 278 (289)
+||+.+..-..... .....+. +++ ..+++||+....+
T Consensus 217 ~~~~~~~~~~~~~~---~~~~~p~-~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 217 KLLAGSTTSTVLPF---TGLNTPL-AVAVDSDRTVYVADRGN 254 (270)
T ss_dssp EECTTCSCCEECCC---CSCSCEE-EEEECTTCCEEEEEGGG
T ss_pred EEcCCCCcceeecc---CCCCCce-eEEECCCCCEEEEECCC
Confidence 99987754333221 1111222 333 3467899987543
No 55
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.24 E-value=0.0012 Score=58.95 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=31.8
Q ss_pred CCChHHHHHHHhhcC-ChhhHHHHHHHhhhHHhhh
Q 048803 5 PDLPNEIALECLSRV-SYKQFATISSVCKGWKSEI 38 (289)
Q Consensus 5 ~~Lp~dl~~~il~~l-p~~~l~~~~~v~k~W~~l~ 38 (289)
..||||++..||.+| |.++..+++.|||+|+.+.
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 479999999999999 9999999999999999883
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.23 E-value=0.0076 Score=50.16 Aligned_cols=140 Identities=11% Similarity=0.134 Sum_probs=66.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCe-EEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISAT-WRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~~~~ 158 (289)
..+.+||..++.|+.+..+....... ..++. -+++.++.|+.+ ..+.+||..+++ |.....+......
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h~~~v---~~~~~s~~~~~l~s~s~d-------~~v~vwd~~~~~~~~~~~~~~~~~~~ 102 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDHDKIV---TCVDWAPKSNRIVTCSQD-------RNAYVYEKRPDGTWKQTLVLLRLNRA 102 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCCSSCE---EEEEECTTTCCEEEEETT-------SSEEEC------CCCCEEECCCCSSC
T ss_pred CEEEEEEccCCceEEEEEEecCCceE---EEEEEeCCCCEEEEEeCC-------CeEEEEEcCCCCceeeeeEecccCCc
Confidence 45678888888777776665433221 12222 245666666643 457888888776 4333222211111
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc-eEeCCCCCccccc-cceEEE--CCEEEEEeeecCCCCCcccc
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE-WASLPDMSRERDE-CKAVFH--CGKLLVIGGYSTNAQGRFER 234 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~-~~~~~~--~~~l~~~gG~~~~~~~~~~~ 234 (289)
...++..-++..++.|+.+. .+..||..+.+ |..+..+..++.. ...+.+ ++++++.|+.++
T Consensus 103 v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~-------- 168 (377)
T 3dwl_C 103 ATFVRWSPNEDKFAVGSGAR------VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR-------- 168 (377)
T ss_dssp EEEEECCTTSSCCEEEESSS------CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS--------
T ss_pred eEEEEECCCCCEEEEEecCC------eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC--------
Confidence 22223222566666666543 37888887764 4433333321221 122222 567777777653
Q ss_pred eEEEEECCCC
Q 048803 235 HAEAFDAAAQ 244 (289)
Q Consensus 235 ~v~~yd~~~~ 244 (289)
.+..||..+.
T Consensus 169 ~i~iwd~~~~ 178 (377)
T 3dwl_C 169 KAYVLSAYVR 178 (377)
T ss_dssp CEEEEEECCS
T ss_pred EEEEEEEEec
Confidence 5788887543
No 57
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.15 E-value=0.25 Score=39.15 Aligned_cols=161 Identities=7% Similarity=0.021 Sum_probs=82.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||+. ++....+ ++..... -..++. -++.+|+... ....+.+||+. ++.+...... .....
T Consensus 41 ~~v~~~~~~-~~~~~~~-~~~~~~~---~~~i~~~~~g~l~v~~~-------~~~~v~~~d~~-g~~~~~~~~~-~~~~~ 106 (300)
T 2qc5_A 41 NKISSLDQS-GRIKEFE-VPTPDAK---VMCLIVSSLGDIWFTEN-------GANKIGKLSKK-GGFTEYPLPQ-PDSGP 106 (300)
T ss_dssp TEEEEECTT-SCEEEEE-CSSTTCC---EEEEEECTTSCEEEEET-------TTTEEEEECTT-SCEEEEECSS-TTCCE
T ss_pred CeEEEECCC-CceEEEE-CCCCCCc---ceeEEECCCCCEEEEec-------CCCeEEEECCC-CCeEEecCCC-CCCCC
Confidence 467889988 6665432 2211111 113333 3467888643 13558899988 6665443211 11223
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCcccccc-ceEE-ECCEEEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDEC-KAVF-HCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~~-~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
.+.+...++.+|+..... ..+..||+. ++..... ++...... ..+. -+++||+..... ..+.
T Consensus 107 ~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~~--------~~i~ 170 (300)
T 2qc5_A 107 YGITEGLNGDIWFTQLNG------DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQN--------NSIG 170 (300)
T ss_dssp EEEEECSTTCEEEEETTT------TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETTT--------TEEE
T ss_pred ccceECCCCCEEEEccCC------CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecCC--------CeEE
Confidence 445543478898874322 258889887 5554331 11111112 2222 257788765221 3688
Q ss_pred EEECCCCceeecccccccCCCCCCceeee-eCCeEEEEe
Q 048803 238 AFDAAAQQWGPVEEDFMETATCPRSCAGV-DSNDLYMCR 275 (289)
Q Consensus 238 ~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ly~~G 275 (289)
+||+ +++...+.. +.....+ .+++. .+++||+..
T Consensus 171 ~~~~-~g~~~~~~~--~~~~~~~-~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 171 RITN-TGKLEEYPL--PTNAAAP-VGITSGNDGALWFVE 205 (300)
T ss_dssp EECT-TCCEEEEEC--SSTTCCE-EEEEECTTSSEEEEE
T ss_pred EECC-CCcEEEeeC--CCCCCCc-ceEEECCCCCEEEEc
Confidence 9998 666655432 1111112 23332 367888875
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.13 E-value=0.23 Score=42.23 Aligned_cols=164 Identities=14% Similarity=0.116 Sum_probs=80.3
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
..+.+||..+++-... +...... ...+..++..++.|+.+ ..+.+||..+.+-...-... .....
T Consensus 219 g~i~~wd~~~~~~~~~--~~~~~~~----v~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~--~~~v~ 283 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHV--LMGHVAA----VRCVQYDGRRVVSGAYD-------FMVKVWDPETETCLHTLQGH--TNRVY 283 (445)
T ss_dssp SEEEEEESSSCCEEEE--EECCSSC----EEEEEECSSCEEEEETT-------SCEEEEEGGGTEEEEEECCC--SSCEE
T ss_pred CEEEEEECCCCcEEEE--EcCCccc----EEEEEECCCEEEEEcCC-------CEEEEEECCCCcEeEEecCC--CCceE
Confidence 4677778776553211 1111111 13334466666666643 45788998877632211111 11122
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEE
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
+.. .++..++.|+.+. .+..||..+.+-... +............+++.++.|+.++ .|..||
T Consensus 284 ~~~--~~~~~l~~~~~d~------~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~dg--------~i~vwd 345 (445)
T 2ovr_B 284 SLQ--FDGIHVVSGSLDT------SIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNADS--------TVKIWD 345 (445)
T ss_dssp EEE--ECSSEEEEEETTS------CEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETTS--------CEEEEE
T ss_pred EEE--ECCCEEEEEeCCC------eEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCCC--------eEEEEE
Confidence 222 3666677766543 388999887653211 1111111223344566677776543 589999
Q ss_pred CCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 241 AAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 241 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
..+++-...-. .+.........+.+++.+++.|+.|+
T Consensus 346 ~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~l~s~~~dg 382 (445)
T 2ovr_B 346 IKTGQCLQTLQ--GPNKHQSAVTCLQFNKNFVITSSDDG 382 (445)
T ss_dssp TTTCCEEEEEC--STTSCSSCEEEEEECSSEEEEEETTS
T ss_pred CCCCcEEEEEc--cCCCCCCCEEEEEECCCEEEEEeCCC
Confidence 87765322111 11101111122334677777777553
No 59
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.06 E-value=0.073 Score=45.34 Aligned_cols=163 Identities=14% Similarity=0.105 Sum_probs=78.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~ 159 (289)
..+.+||..+++-... +...... ...+...+..++.|+.+ ..+.+||..+.+-.. ...+.......
T Consensus 193 g~i~vwd~~~~~~~~~--~~~h~~~----v~~l~~~~~~l~s~s~d-------g~i~vwd~~~~~~~~~~~~~~~~~~~v 259 (435)
T 1p22_A 193 STVRVWDVNTGEMLNT--LIHHCEA----VLHLRFNNGMMVTCSKD-------RSIAVWDMASPTDITLRRVLVGHRAAV 259 (435)
T ss_dssp SCEEEEESSSCCEEEE--ECCCCSC----EEEEECCTTEEEEEETT-------SCEEEEECSSSSCCEEEEEECCCSSCE
T ss_pred CeEEEEECCCCcEEEE--EcCCCCc----EEEEEEcCCEEEEeeCC-------CcEEEEeCCCCCCceeeeEecCCCCcE
Confidence 4567777776653221 1111111 13334455566666533 457788887654210 01111001111
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAF 239 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~y 239 (289)
.+.. .++...+.|+.+. .+..||..+.+-.. .+.........+..++++++.|+.++ .|..|
T Consensus 260 ~~~~--~~~~~l~s~~~dg------~i~vwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~g~~dg--------~i~iw 321 (435)
T 1p22_A 260 NVVD--FDDKYIVSASGDR------TIKVWNTSTCEFVR--TLNGHKRGIACLQYRDRLVVSGSSDN--------TIRLW 321 (435)
T ss_dssp EEEE--EETTEEEEEETTS------EEEEEETTTCCEEE--EEECCSSCEEEEEEETTEEEEEETTS--------CEEEE
T ss_pred EEEE--eCCCEEEEEeCCC------eEEEEECCcCcEEE--EEcCCCCcEEEEEeCCCEEEEEeCCC--------eEEEE
Confidence 1222 2555666665433 48889988764321 11111112233345677777777643 58999
Q ss_pred ECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 240 DAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 240 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
|..+++-.. .. ........++ .+++..++.|+.|+
T Consensus 322 d~~~~~~~~--~~--~~h~~~v~~~-~~~~~~l~sg~~dg 356 (435)
T 1p22_A 322 DIECGACLR--VL--EGHEELVRCI-RFDNKRIVSGAYDG 356 (435)
T ss_dssp ETTTCCEEE--EE--CCCSSCEEEE-ECCSSEEEEEETTS
T ss_pred ECCCCCEEE--EE--eCCcCcEEEE-EecCCEEEEEeCCC
Confidence 998764322 11 1111121223 34788888887554
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.05 E-value=0.2 Score=40.21 Aligned_cols=135 Identities=20% Similarity=0.312 Sum_probs=69.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~ 158 (289)
..+.+||..+++....-. ...... ..++. -++++++.|+.+ ..+.+||..+++-.. +.... ..
T Consensus 45 g~i~iw~~~~~~~~~~~~--~h~~~v---~~~~~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~~---~~ 109 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTIS--GHKLGI---SDVAWSSDSNLLVSASDD-------KTLKIWDVSSGKCLKTLKGHS---NY 109 (312)
T ss_dssp SCEEEEETTTCCEEEEEC--CCSSCE---EEEEECTTSSEEEEEETT-------SEEEEEETTTCCEEEEEECCS---SC
T ss_pred CeEEEEeCCCcccchhhc--cCCCce---EEEEEcCCCCEEEEECCC-------CEEEEEECCCCcEEEEEcCCC---CC
Confidence 467788887776543221 111110 12222 245666666643 457888988765322 22111 11
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v 236 (289)
...++..-++.+++.|+.+. .+..||+.+.+-... ++........+. -++++++.|+.++ .+
T Consensus 110 v~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i 173 (312)
T 4ery_A 110 VFCCNFNPQSNLIVSGSFDE------SVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG--------LC 173 (312)
T ss_dssp EEEEEECSSSSEEEEEETTS------CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--------CE
T ss_pred EEEEEEcCCCCEEEEEeCCC------cEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC--------cE
Confidence 12233323666777776544 388899887653211 111111112222 2567777777643 58
Q ss_pred EEEECCCCce
Q 048803 237 EAFDAAAQQW 246 (289)
Q Consensus 237 ~~yd~~~~~W 246 (289)
..||..+.+-
T Consensus 174 ~~wd~~~~~~ 183 (312)
T 4ery_A 174 RIWDTASGQC 183 (312)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCce
Confidence 8999887653
No 61
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.01 E-value=0.49 Score=38.44 Aligned_cols=138 Identities=10% Similarity=0.120 Sum_probs=71.6
Q ss_pred eeEEEEECCCCCeEeCCC-CCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCC--CCc
Q 048803 81 YRITVLELGSGEWSELPP-IPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPG--GRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~--~~~ 157 (289)
..++++|+.+.+-...-+ ........ .....++.+|+... ...+.++|+.+++-...-.... ...
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~----~~s~dg~~l~~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGL----ALDSEGKRLYTTNA--------DGELITIDTADNKILSRKKLLDDGKEH 231 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCC----EEETTTTEEEEECT--------TSEEEEEETTTTEEEEEEECCCSSSCC
T ss_pred ceEEEEcCCCCceEEEecCCCCccceE----EECCCCCEEEEEcC--------CCeEEEEECCCCeEEEEEEcCCCCCCc
Confidence 568899998776433222 11111111 22223456776532 3467889998887432222110 111
Q ss_pred cceeEEEecC-CEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECC-EEEEEeeecCCCCCcccc
Q 048803 158 MLFGCASDGD-RTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCG-KLLVIGGYSTNAQGRFER 234 (289)
Q Consensus 158 ~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~l~~~gG~~~~~~~~~~~ 234 (289)
...+.+..-+ +.+|+.... ...+..||+.+.+-...-+.+.+ ...+. -++ .+|+....+ +
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~------~~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~--------~ 294 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSK------AAEVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQA--------G 294 (353)
T ss_dssp CEEEEEEETTTTEEEEEESS------SSEEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTT--------T
T ss_pred ccceEEECCCCCEEEEEeCC------CCEEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCC--------C
Confidence 2223343334 457776432 23589999988765433222222 12222 244 577765332 3
Q ss_pred eEEEEECCCCcee
Q 048803 235 HAEAFDAAAQQWG 247 (289)
Q Consensus 235 ~v~~yd~~~~~W~ 247 (289)
.+.+||..+.+..
T Consensus 295 ~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 295 KVSVIDAKSYKVV 307 (353)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEECCCCeEE
Confidence 6899999877644
No 62
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.01 E-value=0.11 Score=41.38 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=63.6
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAF 239 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~y 239 (289)
++....-++.+|+..|... .+.+..+|+++++=..--+++......+.+..+++||+....+ +.+.+|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~--------~~v~vi 91 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK--------NIGFIY 91 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC--------SEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC--------CEEEEE
Confidence 5666643589999877432 2469999999987543222332223345666788999996432 479999
Q ss_pred ECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 240 DAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 240 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
|+++.+ .+.....+ .. ...+++.-++++|+..|.+.
T Consensus 92 D~~t~~--v~~~i~~g-~~-~g~glt~Dg~~l~vs~gs~~ 127 (266)
T 2iwa_A 92 DRRTLS--NIKNFTHQ-MK-DGWGLATDGKILYGSDGTSI 127 (266)
T ss_dssp ETTTTE--EEEEEECC-SS-SCCEEEECSSSEEEECSSSE
T ss_pred ECCCCc--EEEEEECC-CC-CeEEEEECCCEEEEECCCCe
Confidence 988654 33332222 11 22346655678998876443
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.96 E-value=0.18 Score=41.84 Aligned_cols=136 Identities=7% Similarity=-0.004 Sum_probs=71.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||..+.+............. -..++.. ++.+++.|+.+ ..+.+||..+.....+.........
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~ 165 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDA---ITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSVIQVFAKTDSWDYW 165 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCB---EEEEEEETTEEEEEEEEETT-------TEEEEEETTSCEEEEEECCCCSSCC
T ss_pred CeEEEEeCCCcccceeeecCCcCCc---eeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCceEEEeccCCCCCC
Confidence 5688899988776544332111111 1123333 34666666533 4578899888776655433311111
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CCE-EEEEeeecCCCCCcccce
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CGK-LLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~-l~~~gG~~~~~~~~~~~~ 235 (289)
....+..-++..++.|+.+. .+..||+....-..+.... .....+.+ +++ +++.|+.++ .
T Consensus 166 v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d~--------~ 228 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTG------RLLLLGLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATSSVDA--------T 228 (383)
T ss_dssp EEEEEEETTTTEEEEEETTS------EEEEEETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEEETTS--------E
T ss_pred eEEEEECCCCCEEEEECCCC------CEEEEECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEEeCCC--------E
Confidence 23333334667777766543 4888888543322221111 11112222 444 777776542 6
Q ss_pred EEEEECCC
Q 048803 236 AEAFDAAA 243 (289)
Q Consensus 236 v~~yd~~~ 243 (289)
|..||..+
T Consensus 229 i~iwd~~~ 236 (383)
T 3ei3_B 229 VKLWDLRN 236 (383)
T ss_dssp EEEEEGGG
T ss_pred EEEEeCCC
Confidence 88899876
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.96 E-value=0.22 Score=40.12 Aligned_cols=166 Identities=13% Similarity=0.119 Sum_probs=80.3
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||..+++......+....... ..++.. +++.++.|+.+ ..+.+||..+++....-... ....
T Consensus 119 ~~i~~~d~~~~~~~~~~~~~~~~~~i---~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~--~~~i 186 (337)
T 1gxr_A 119 STLSIWDLAAPTPRIKAELTSSAPAC---YALAISPDSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGH--TDGA 186 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCE---EEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCC--SSCE
T ss_pred CcEEEEECCCCCcceeeecccCCCce---EEEEECCCCCEEEEEeCC-------CcEEEEeCCCCceeeeeecc--cCce
Confidence 56888998887643332222211111 122222 45566666532 45889999887643322111 1112
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECCEEEEEeeecCCCCCcccceEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCGKLLVIGGYSTNAQGRFERHAEA 238 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~~ 238 (289)
...+..-++..++.++.+. .+..||+.+.+-...-..+.+ -...+. -+++.+++|+.+ ..+..
T Consensus 187 ~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~--------~~i~~ 250 (337)
T 1gxr_A 187 SCIDISNDGTKLWTGGLDN------TVRSWDLREGRQLQQHDFTSQ--IFSLGYCPTGEWLAVGMES--------SNVEV 250 (337)
T ss_dssp EEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEEECSSC--EEEEEECTTSSEEEEEETT--------SCEEE
T ss_pred EEEEECCCCCEEEEEecCC------cEEEEECCCCceEeeecCCCc--eEEEEECCCCCEEEEEcCC--------CcEEE
Confidence 2333323666666665432 488999887643221111111 111122 256677777643 25889
Q ss_pred EECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCce
Q 048803 239 FDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 239 yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
||..+.+-..+... ...........++++++.|+.+
T Consensus 251 ~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 251 LHVNKPDKYQLHLH----ESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp EETTSSCEEEECCC----SSCEEEEEECTTSSEEEEEETT
T ss_pred EECCCCCeEEEcCC----ccceeEEEECCCCCEEEEecCC
Confidence 99987653332211 1111111223456666666644
No 65
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.95 E-value=0.059 Score=44.93 Aligned_cols=135 Identities=16% Similarity=0.142 Sum_probs=72.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||..+++....-..+. .. ..++.. +..||+.+.. ...+.+||..+++-...-... ..
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~--~v----~~~~~spdg~~l~~~~~~-------~~~v~v~d~~~~~~~~~~~~~---~~ 117 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS--SP----QGVAVSPDGKQVYVTNMA-------SSTLSVIDTTSNTVAGTVKTG---KS 117 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS--SE----EEEEECTTSSEEEEEETT-------TTEEEEEETTTTEEEEEEECS---SS
T ss_pred CeEEEEECCCCeEEEEEECCC--Cc----cceEECCCCCEEEEEECC-------CCEEEEEECCCCeEEEEEeCC---CC
Confidence 578889998876543322222 11 122222 3457666542 356899999988754432222 11
Q ss_pred ceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CC-EEEEEeeecCCCCCcccce
Q 048803 159 LFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CG-KLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 159 ~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~l~~~gG~~~~~~~~~~~~ 235 (289)
..+.+..-++ .+|+.++.+ ..+..+|+.+++....-... ......+.. ++ .||+.++.+ +.
T Consensus 118 ~~~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~--------~~ 181 (391)
T 1l0q_A 118 PLGLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS--------MS 181 (391)
T ss_dssp EEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT--------TE
T ss_pred cceEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC--------CE
Confidence 2334433344 576776533 25899999887654322111 111122222 34 566665432 36
Q ss_pred EEEEECCCCcee
Q 048803 236 AEAFDAAAQQWG 247 (289)
Q Consensus 236 v~~yd~~~~~W~ 247 (289)
+..||+.+++-.
T Consensus 182 v~~~d~~~~~~~ 193 (391)
T 1l0q_A 182 ISVIDTVTNSVI 193 (391)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCeEE
Confidence 899999887543
No 66
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.92 E-value=0.39 Score=39.00 Aligned_cols=136 Identities=14% Similarity=0.140 Sum_probs=69.7
Q ss_pred eeEEEEECCCCCeEe-CCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSE-LPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||..+++-.. +..-+.... .....-+++.++.|+.+ ..+.+||..+++-...-... ....
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~-----~~~~spdg~~l~~g~~d-------g~v~i~~~~~~~~~~~~~~~--~~~v 167 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAW-----TLAFSPDSQYLATGTHV-------GKVNIFGVESGKKEYSLDTR--GKFI 167 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCC-----CEEECTTSSEEEEECTT-------SEEEEEETTTCSEEEEEECS--SSCE
T ss_pred CcEEEEECCCCCEEEEEeCCCccEE-----EEEECCCCCEEEEEcCC-------CcEEEEEcCCCceeEEecCC--CceE
Confidence 577889988765322 211111111 12223345666666633 45778888766532211111 1112
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
.+++..-+++..+.|+.+. .+..||..+++-... +.........+. -++++++.|+.++ .|.
T Consensus 168 ~~~~~spdg~~lasg~~dg------~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg--------~i~ 231 (321)
T 3ow8_A 168 LSIAYSPDGKYLASGAIDG------IINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG--------YIK 231 (321)
T ss_dssp EEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS--------CEE
T ss_pred EEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC--------eEE
Confidence 2333333777777776554 388899887743211 111111112222 2677778876643 588
Q ss_pred EEECCCCce
Q 048803 238 AFDAAAQQW 246 (289)
Q Consensus 238 ~yd~~~~~W 246 (289)
+||..+.+.
T Consensus 232 iwd~~~~~~ 240 (321)
T 3ow8_A 232 IYDVQHANL 240 (321)
T ss_dssp EEETTTCCE
T ss_pred EEECCCcce
Confidence 999877654
No 67
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.80 E-value=0.54 Score=43.53 Aligned_cols=166 Identities=10% Similarity=0.049 Sum_probs=87.6
Q ss_pred eEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCC----CCCC
Q 048803 82 RITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADM----PGGR 156 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~----~~~~ 156 (289)
-+.+||+.+++++............ ...++... ++.|++.. ...+.+||+.+++|+..... ....
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~-~v~~i~~d~~g~lwigt---------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 497 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNE-NVYAILPDGEGNLWLGT---------LSALVRFNPEQRSFTTIEKEKDGTPVVS 497 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCS-CEEEEEECSSSCEEEEE---------SSCEEEEETTTTEEEECCBCTTCCBCCC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCC-eeEEEEECCCCCEEEEe---------cCceeEEeCCCCeEEEccccccccccCC
Confidence 4667888888777654321111111 11123222 46777642 13488999999999877532 1001
Q ss_pred ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCC---C-ccccccceEE--ECCEEEEEeeecCCCCC
Q 048803 157 RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDM---S-RERDECKAVF--HCGKLLVIGGYSTNAQG 230 (289)
Q Consensus 157 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---~-~~~~~~~~~~--~~~~l~~~gG~~~~~~~ 230 (289)
....+.....+|.|++... ..+..||+.++++ ..... . .+........ -+|+|++...
T Consensus 498 ~~i~~i~~d~~g~lWigt~--------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~------- 561 (795)
T 4a2l_A 498 KQITTLFRDSHKRLWIGGE--------EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR------- 561 (795)
T ss_dssp CCEEEEEECTTCCEEEEES--------SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-------
T ss_pred ceEEEEEECCCCCEEEEeC--------CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-------
Confidence 1122333333677887532 1388999998887 43211 1 1111111222 2577777542
Q ss_pred cccceEEEEECCCCceeeccccc-ccCCCCCCceeee-eCCeEEEEeCce
Q 048803 231 RFERHAEAFDAAAQQWGPVEEDF-METATCPRSCAGV-DSNDLYMCREGD 278 (289)
Q Consensus 231 ~~~~~v~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~-~~~~ly~~GG~~ 278 (289)
+.+.+||+.++++....... ++ .....+++. .+|+|++.+...
T Consensus 562 ---~Gl~~~d~~~~~~~~~~~~~gl~--~~~i~~i~~d~~g~lWi~t~~G 606 (795)
T 4a2l_A 562 ---EGFYCFNEKDKQIKRYNTTNGLP--NNVVYGILEDSFGRLWLSTNRG 606 (795)
T ss_dssp ---SCEEEEETTTTEEEEECGGGTCS--CSCEEEEEECTTSCEEEEETTE
T ss_pred ---CCceeECCCCCcEEEeCCCCCCc--hhheEEEEECCCCCEEEEcCCc
Confidence 14889999999887764321 11 111223333 367888887543
No 68
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.79 E-value=0.36 Score=39.23 Aligned_cols=133 Identities=13% Similarity=0.102 Sum_probs=69.7
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
+++.++.|+.+ ..+.+||..+++-.. +.... .+ ...++..-++.+.+.|+.+. .+..||..+.
T Consensus 175 dg~~lasg~~d-------g~i~iwd~~~~~~~~~~~~h~-~~--v~~l~~spd~~~l~s~s~dg------~i~iwd~~~~ 238 (321)
T 3ow8_A 175 DGKYLASGAID-------GIINIFDIATGKLLHTLEGHA-MP--IRSLTFSPDSQLLVTASDDG------YIKIYDVQHA 238 (321)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECCCS-SC--CCEEEECTTSCEEEEECTTS------CEEEEETTTC
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcEEEEEcccC-Cc--eeEEEEcCCCCEEEEEcCCC------eEEEEECCCc
Confidence 45666666643 457889998876432 22211 11 22334333777888877654 3888998876
Q ss_pred ceEeCCCCCccccc-cceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCcee-eeeCCe
Q 048803 195 EWASLPDMSRERDE-CKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCA-GVDSND 270 (289)
Q Consensus 195 ~W~~~~~~~~~~~~-~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~~ 270 (289)
.-... +. .+.. ...+.+ +++.++.|+.++ .|.+||..+.+-.. ... .. .....++ ...+++
T Consensus 239 ~~~~~--~~-~h~~~v~~~~~sp~~~~l~s~s~D~--------~v~iwd~~~~~~~~--~~~-~h-~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 239 NLAGT--LS-GHASWVLNVAFCPDDTHFVSSSSDK--------SVKVWDVGTRTCVH--TFF-DH-QDQVWGVKYNGNGS 303 (321)
T ss_dssp CEEEE--EC-CCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEEEE--EEC-CC-SSCEEEEEECTTSS
T ss_pred ceeEE--Ec-CCCCceEEEEECCCCCEEEEEeCCC--------cEEEEeCCCCEEEE--EEc-CC-CCcEEEEEECCCCC
Confidence 54321 11 1111 111222 677777777653 58899987764322 210 11 1111122 234677
Q ss_pred EEEEeCcee
Q 048803 271 LYMCREGDV 279 (289)
Q Consensus 271 ly~~GG~~~ 279 (289)
.++.||.|+
T Consensus 304 ~l~s~~~d~ 312 (321)
T 3ow8_A 304 KIVSVGDDQ 312 (321)
T ss_dssp EEEEEETTC
T ss_pred EEEEEeCCC
Confidence 777777654
No 69
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.75 E-value=0.54 Score=39.82 Aligned_cols=147 Identities=12% Similarity=0.056 Sum_probs=78.7
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCC-EEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGP-ELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..++++|..+++...+...+... ...+. -++ .|++.+..+ ....++++|..+++.+.+.... ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~------~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~~~~~~~l~~~~-~~-- 268 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHN------GAPAFSPDGSKLAFALSKT-----GSLNLYVMDLASGQIRQVTDGR-SN-- 268 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCE------EEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEECCCCS-SC--
T ss_pred cEEEEEECCCCcEEEeecCCCcc------cCEEEcCCCCEEEEEEecC-----CCceEEEEECCCCCEEeCcCCC-Cc--
Confidence 47889999988776654332211 12222 234 465555432 2356999999998877665433 11
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceE-EECCEEEEEeeecCCCCCcccceEE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAV-FHCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
....+..-+++..++++..+ ....++.+|+.+++-..+.... ......+ .-+|+.+++++.... ...+.
T Consensus 269 ~~~~~~spdg~~l~~~s~~~---g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g-----~~~i~ 338 (415)
T 2hqs_A 269 NTEPTWFPDSQNLAFTSDQA---GRPQVYKVNINGGAPQRITWEG--SQNQDADVSSDGKFMVMVSSNGG-----QQHIA 338 (415)
T ss_dssp EEEEEECTTSSEEEEEECTT---SSCEEEEEETTSSCCEECCCSS--SEEEEEEECTTSSEEEEEEECSS-----CEEEE
T ss_pred ccceEECCCCCEEEEEECCC---CCcEEEEEECCCCCEEEEecCC--CcccCeEECCCCCEEEEEECcCC-----ceEEE
Confidence 22233323565444433211 1236888899887654442211 1111112 236665555554321 13689
Q ss_pred EEECCCCceeeccc
Q 048803 238 AFDAAAQQWGPVEE 251 (289)
Q Consensus 238 ~yd~~~~~W~~~~~ 251 (289)
.+|+.+++...+..
T Consensus 339 ~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 339 KQDLATGGVQVLSS 352 (415)
T ss_dssp EEETTTCCEEECCC
T ss_pred EEECCCCCEEEecC
Confidence 99999988766554
No 70
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.12 Score=47.56 Aligned_cols=174 Identities=11% Similarity=0.101 Sum_probs=81.8
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--C--CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--G--PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~ 156 (289)
..+.+||..++++..+..+....... ..+.. + +.+++.|+.+ ..+.+||..++.-.....+....
T Consensus 77 g~I~vwd~~~~~~~~~~~~~~h~~~V----~~v~~sp~~~~~~l~sgs~d-------g~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 77 GKVLIWKEENGRWSQIAVHAVHSASV----NSVQWAPHEYGPLLLVASSD-------GKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCE----EEEEECCGGGCSEEEEEETT-------SEEEEEECCSSSCCCCEEEECCS
T ss_pred CeEEEEECCCCcccccccccCCCCCe----EEEEECCCCCCCEEEEEeCC-------CcEEEEEeecCCCcceeEeecCC
Confidence 56788898888765554433222211 22222 2 5566666643 45778887665211100000001
Q ss_pred ccceeEEEec-------------CCEEEEEcCCCCCCcccCceEEEEcCCC--ceEeCCCCCccccccceEEE--C---C
Q 048803 157 RMLFGCASDG-------------DRTVYVAGGHDEDKNALKSAMAYDVARD--EWASLPDMSRERDECKAVFH--C---G 216 (289)
Q Consensus 157 ~~~~~~~~~~-------------~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~--~---~ 216 (289)
.........- ++.+++.|+.+. .+..||..+. .+..+..+.........+.+ + +
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~ 219 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLR 219 (753)
T ss_dssp SCEEEEEECCCC---------CGGGCCEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSS
T ss_pred CceEEEEecCcccccccccccCCCCCEEEEEECCC------eEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCC
Confidence 1111122111 255666666543 3788887654 34333222211111222222 4 7
Q ss_pred EEEEEeeecCCCCCcccceEEEEECCCCc--eeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 217 KLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 217 ~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
++++.|+.++ .|.+||..+.+ +.....................+++.++.||.|+
T Consensus 220 ~~l~s~s~Dg--------~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg 276 (753)
T 3jro_A 220 SYLASVSQDR--------TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (753)
T ss_dssp EEEEEEESSS--------CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSS
T ss_pred CEEEEEecCC--------EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCC
Confidence 8888887653 58888887753 2211111011111121223345777777777654
No 71
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.11 Score=42.50 Aligned_cols=143 Identities=11% Similarity=0.210 Sum_probs=68.4
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecC--CEEEEEcCCCCCCcccCceEEEEcCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGD--RTVYVAGGHDEDKNALKSAMAYDVAR 193 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~yd~~~ 193 (289)
++.+++.|+.+ ..+.+||..++.|+.+..+........+.+..-+ +...+.|+.+. .+..+|..+
T Consensus 164 ~~~~l~s~s~D-------~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~------~v~iw~~~~ 230 (330)
T 2hes_X 164 SEALLASSSYD-------DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS------TVRVWKYMG 230 (330)
T ss_dssp SSSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS------CEEEEEEEE
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC------eEEEEEecC
Confidence 45666666644 3477888877777655444311111122222122 44555665443 356666543
Q ss_pred C------ceEeCCCCCccccc--cceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceee
Q 048803 194 D------EWASLPDMSRERDE--CKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAG 265 (289)
Q Consensus 194 ~------~W~~~~~~~~~~~~--~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 265 (289)
. .|..+..++..+.. ...+...+.+++.||.++ .|.+||..+++|..+.............+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg--------~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~ 302 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG--------VLAVYEEVDGEWKVFAKRALCHGVYEINVVK 302 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTS--------CEEEEEEETTEEEEEEEESCTTTTSCEEEEE
T ss_pred CCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCC--------EEEEEEcCCCceEEEeccccccccceEEEEE
Confidence 2 35444333321211 112222444666666543 5888998888886654321111110111222
Q ss_pred -ee--CCeEEEEeCcee
Q 048803 266 -VD--SNDLYMCREGDV 279 (289)
Q Consensus 266 -~~--~~~ly~~GG~~~ 279 (289)
.. ++++++.||.|+
T Consensus 303 ~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 303 WLELNGKTILATGGDDG 319 (330)
T ss_dssp EC-----CCEEEEETTS
T ss_pred EecCCCceEEEEecCCC
Confidence 12 567777787664
No 72
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.69 E-value=0.61 Score=37.82 Aligned_cols=140 Identities=13% Similarity=0.042 Sum_probs=70.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCC-----
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGG----- 155 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----- 155 (289)
..++++|+.+.+-...-+....... ......++.+|+.+.. ...+.++|+.+++-...-+....
T Consensus 69 ~~v~~~d~~~~~~~~~~~~~~~~~~----~~~s~dg~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 137 (353)
T 3vgz_A 69 GVVYRLDPVTLEVTQAIHNDLKPFG----ATINNTTQTLWFGNTV-------NSAVTAIDAKTGEVKGRLVLDDRKRTEE 137 (353)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCS----EEEETTTTEEEEEETT-------TTEEEEEETTTCCEEEEEESCCCCCCSS
T ss_pred ccEEEEcCCCCeEEEEEecCCCcce----EEECCCCCEEEEEecC-------CCEEEEEeCCCCeeEEEEecCCCccccc
Confidence 5789999988765433222221111 1222233568887653 34688999988774322111100
Q ss_pred --CccceeEEEecC-CEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECC-EEEEEeeecCCCCC
Q 048803 156 --RRMLFGCASDGD-RTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCG-KLLVIGGYSTNAQG 230 (289)
Q Consensus 156 --~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~l~~~gG~~~~~~~ 230 (289)
+....+.+..-+ +.+|+.+...+ ..+..+|+.+.+-...-+.. .......+. -++ .+|+... +
T Consensus 138 ~~~~~~~~~~~s~dg~~l~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~-~----- 205 (353)
T 3vgz_A 138 VRPLQPRELVADDATNTVYISGIGKE-----SVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKRLYTTNA-D----- 205 (353)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEESSS-----CEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTEEEEECT-T-----
T ss_pred cCCCCCceEEECCCCCEEEEEecCCC-----ceEEEEcCCCCceEEEecCC-CCccceEEECCCCCEEEEEcC-C-----
Confidence 111233443334 45777652221 35899999877533221111 111122222 244 5666532 1
Q ss_pred cccceEEEEECCCCce
Q 048803 231 RFERHAEAFDAAAQQW 246 (289)
Q Consensus 231 ~~~~~v~~yd~~~~~W 246 (289)
+.+.+||+.+++-
T Consensus 206 ---~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 206 ---GELITIDTADNKI 218 (353)
T ss_dssp ---SEEEEEETTTTEE
T ss_pred ---CeEEEEECCCCeE
Confidence 3688899987753
No 73
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.60 E-value=0.14 Score=43.24 Aligned_cols=141 Identities=9% Similarity=-0.021 Sum_probs=74.1
Q ss_pred eEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCC---CCCcc
Q 048803 82 RITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMP---GGRRM 158 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~~~~~ 158 (289)
.++.+|+.++.++.+..++...... ..+.. -++.+++.++.+ ..+.+||..+++.....+.. .....
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~--~~~~s-~~~~~~~~~~~~-------~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 171 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPK--SVRFI-DNTRLAIPLLED-------EGMDVLDINSGQTVRLSPPEKYKKKLGF 171 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBC--CCEES-SSSEEEEEBTTS-------SSEEEEETTTCCEEEECCCHHHHTTCCE
T ss_pred EEEEECCCCCcceEEEEEcCCCCce--EEEEe-CCCeEEEEeCCC-------CeEEEEECCCCeEeeecCcccccccCCc
Confidence 6777888776655544433322211 01222 267888876532 45899999988765433221 01111
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v 236 (289)
..+++..-++.+++.++.+. .+..||+.+.+-...-... .......+.. +..+|+.++.+ +.+
T Consensus 172 v~~~~~~~~~~~~~s~~~d~------~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~--------~~i 236 (433)
T 3bws_A 172 VETISIPEHNELWVSQMQAN------AVHVFDLKTLAYKATVDLT-GKWSKILLYDPIRDLVYCSNWIS--------EDI 236 (433)
T ss_dssp EEEEEEGGGTEEEEEEGGGT------EEEEEETTTCCEEEEEECS-SSSEEEEEEETTTTEEEEEETTT--------TEE
T ss_pred eeEEEEcCCCEEEEEECCCC------EEEEEECCCceEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCC--------CcE
Confidence 22233323788888876433 4889999876532211111 1111122222 34566665432 368
Q ss_pred EEEECCCCcee
Q 048803 237 EAFDAAAQQWG 247 (289)
Q Consensus 237 ~~yd~~~~~W~ 247 (289)
.+||+.+++..
T Consensus 237 ~~~d~~~~~~~ 247 (433)
T 3bws_A 237 SVIDRKTKLEI 247 (433)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCcEE
Confidence 99999877643
No 74
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.56 E-value=0.085 Score=42.81 Aligned_cols=102 Identities=11% Similarity=0.240 Sum_probs=50.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe---CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV---GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~ 157 (289)
..+.+||..+++...+..+...... -..++.. ++.+++.|+.+ ..+.+||..+++|+....+.....
T Consensus 35 ~~v~lwd~~~~~~~~~~~l~gH~~~---V~~v~~~~~~~~~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~ 104 (316)
T 3bg1_A 35 RSVKIFDVRNGGQILIADLRGHEGP---VWQVAWAHPMYGNILASCSYD-------RKVIIWREENGTWEKSHEHAGHDS 104 (316)
T ss_dssp TEEEEEEEETTEEEEEEEEECCSSC---EEEEEECCGGGSSCEEEEETT-------SCEEEECCSSSCCCEEEEECCCSS
T ss_pred CeEEEEEecCCCcEEEEEEcCCCcc---EEEEEeCCCCCCCEEEEEECC-------CEEEEEECCCCcceEEEEccCCCC
Confidence 4677888876643322222211111 1122222 25566666643 447788988876644332221111
Q ss_pred cceeEEEecC--CEEEEEcCCCCCCcccCceEEEEcCCC-ceEe
Q 048803 158 MLFGCASDGD--RTVYVAGGHDEDKNALKSAMAYDVARD-EWAS 198 (289)
Q Consensus 158 ~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~ 198 (289)
...+++..-+ +.+++.|+.+. .+..+|..+. .|..
T Consensus 105 ~V~~v~~~p~~~g~~lasgs~D~------~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 105 SVNSVCWAPHDYGLILACGSSDG------AISLLTYTGEGQWEV 142 (316)
T ss_dssp CCCEEEECCTTTCSCEEEECSSS------CEEEEEECSSSCEEE
T ss_pred ceEEEEECCCCCCcEEEEEcCCC------CEEEEecCCCCCcce
Confidence 1222332223 56777777654 3777887765 5754
No 75
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.54 E-value=0.082 Score=44.04 Aligned_cols=136 Identities=15% Similarity=0.146 Sum_probs=72.3
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||..+++-...-.... .. ..++.. +..||+.++. ...+.+||..+++....-.... .
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~--~~----~~~~~s~dg~~l~~~~~~-------d~~i~v~d~~~~~~~~~~~~~~---~ 75 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS--NP----MGAVISPDGTKVYVANAH-------SNDVSIIDTATNNVIATVPAGS---S 75 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS--SE----EEEEECTTSSEEEEEEGG-------GTEEEEEETTTTEEEEEEECSS---S
T ss_pred CEEEEEECCCCeEEEEeecCC--Cc----ceEEECCCCCEEEEECCC-------CCeEEEEECCCCeEEEEEECCC---C
Confidence 578899998876443222111 11 122222 3457777653 3568899998887644333331 2
Q ss_pred ceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CC-EEEEEeeecCCCCCcccce
Q 048803 159 LFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CG-KLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 159 ~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~l~~~gG~~~~~~~~~~~~ 235 (289)
..+.+..-++ .||+.+..+ ..+..||+.+++-...-... ......+.. ++ .+|+.++.+ +.
T Consensus 76 v~~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~--------~~ 139 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTG--KSPLGLALSPDGKKLYVTNNGD--------KT 139 (391)
T ss_dssp EEEEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEETTT--------TE
T ss_pred ccceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCC--CCcceEEECCCCCEEEEEeCCC--------CE
Confidence 2334432344 466665432 25899999987643221111 111122222 34 466666432 36
Q ss_pred EEEEECCCCceee
Q 048803 236 AEAFDAAAQQWGP 248 (289)
Q Consensus 236 v~~yd~~~~~W~~ 248 (289)
+.+||..+++...
T Consensus 140 v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 140 VSVINTVTKAVIN 152 (391)
T ss_dssp EEEEETTTTEEEE
T ss_pred EEEEECCCCcEEE
Confidence 8999998876544
No 76
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.50 E-value=1.5 Score=40.52 Aligned_cols=166 Identities=7% Similarity=0.042 Sum_probs=89.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCC---CC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPG---GR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~---~~ 156 (289)
.-+.+||+.+++++.......+... ..+++.. ++.|++.. ..-+.+||+.+++|+....... ..
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~---v~~i~~d~~g~lwigt---------~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 494 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLD---VRVFYEDKNKKIWIGT---------HAGVFVIDLASKKVIHHYDTSNSQLLE 494 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCC---EEEEEECTTSEEEEEE---------TTEEEEEESSSSSCCEEECTTTSSCSC
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCe---EEEEEECCCCCEEEEE---------CCceEEEeCCCCeEEecccCccccccc
Confidence 4678899999988877532111111 1133333 46777742 2458899999988865533220 01
Q ss_pred ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCc-cccccceEE--ECCEEEEEeeecCCCCCccc
Q 048803 157 RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSR-ERDECKAVF--HCGKLLVIGGYSTNAQGRFE 233 (289)
Q Consensus 157 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~ 233 (289)
....+.....+|.|++.. .. .-+.+||+.++++........ +........ -+|+|++...
T Consensus 495 ~~i~~i~~d~~g~lWigt-~~------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~---------- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGT-FG------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG---------- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEEE-SS------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET----------
T ss_pred ceeEEEEEcCCCCEEEEE-cC------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC----------
Confidence 112233333367777642 11 237889999988876643110 111111222 2577777542
Q ss_pred ceE-EEEECCCCceeeccccc-ccCCCCCCceeee-eCCeEEEEeCc
Q 048803 234 RHA-EAFDAAAQQWGPVEEDF-METATCPRSCAGV-DSNDLYMCREG 277 (289)
Q Consensus 234 ~~v-~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~-~~~~ly~~GG~ 277 (289)
+.+ ..||+.++++....... ++. ....+++. .+|+|++.+..
T Consensus 558 ~Glv~~~d~~~~~~~~~~~~~gl~~--~~i~~i~~d~~g~lW~~t~~ 602 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQVFQRKEGLPN--THIRAISEDKNGNIWASTNT 602 (781)
T ss_dssp TEEEEESCTTTCCCEEECGGGTCSC--CCCCEEEECSSSCEEEECSS
T ss_pred CCceEEECCCCCcEEEccccCCCCC--ceEEEEEECCCCCEEEEcCC
Confidence 245 88999998887764321 111 11223433 46788887643
No 77
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.49 E-value=0.092 Score=41.61 Aligned_cols=101 Identities=7% Similarity=-0.067 Sum_probs=64.6
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAF 239 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~y 239 (289)
.+... .++.+|+..|..+. +.++|+++++=..-- ++....+.+.+..+++||+....+ +.+.+|
T Consensus 58 qGL~~-~~~~Ly~stG~~g~------v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~--------~~v~V~ 121 (268)
T 3nok_A 58 QGLVF-HQGHFFESTGHQGT------LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE--------GLLFTW 121 (268)
T ss_dssp EEEEE-ETTEEEEEETTTTE------EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS--------CEEEEE
T ss_pred ceEEE-ECCEEEEEcCCCCE------EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC--------CEEEEE
Confidence 44554 38899999886542 889999988543222 443334455677889999986543 479999
Q ss_pred ECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCceeec
Q 048803 240 DAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDVMA 281 (289)
Q Consensus 240 d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~~~ 281 (289)
|+++.+-. .....+ . ...+++.-+++||+..|.+.+.
T Consensus 122 D~~Tl~~~--~ti~~~--~-eGwGLt~Dg~~L~vSdGs~~l~ 158 (268)
T 3nok_A 122 SGMPPQRE--RTTRYS--G-EGWGLCYWNGKLVRSDGGTMLT 158 (268)
T ss_dssp ETTTTEEE--EEEECS--S-CCCCEEEETTEEEEECSSSEEE
T ss_pred ECCcCcEE--EEEeCC--C-ceeEEecCCCEEEEECCCCEEE
Confidence 99876532 221111 1 2345666688899998755433
No 78
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.48 E-value=1.4 Score=40.01 Aligned_cols=109 Identities=15% Similarity=0.184 Sum_probs=59.4
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCC----CCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCC-
Q 048803 81 YRITVLELGSGE--WSELPPIPGFP----DGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGAD- 151 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~----~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~- 151 (289)
..++++|..+++ |+.-...+... +........+..+++||+... ...++.+|..|++ |+.-..
T Consensus 87 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--------dg~l~alD~~tG~~~W~~~~~~ 158 (677)
T 1kb0_A 87 SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--------DGRLIALDAATGKEVWHQNTFE 158 (677)
T ss_dssp GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEETTT
T ss_pred CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------CCEEEEEECCCCCEEeeecCCc
Confidence 578899998876 76544332110 000001134567888887632 3568889998876 875432
Q ss_pred CCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc--eEe
Q 048803 152 MPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE--WAS 198 (289)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~ 198 (289)
-........+..++.++.+|+..+..+. .....+..||.+|++ |+.
T Consensus 159 ~~~~~~~~~~~p~v~~~~v~v~~~~~~~-~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 159 GQKGSLTITGAPRVFKGKVIIGNGGAEY-GVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TCCSSCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEE
T ss_pred CcCcCcccccCcEEECCEEEEEeccccc-CCCCEEEEEECCCCcEEEEe
Confidence 1100111112222247888875432221 123469999999874 864
No 79
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.46 E-value=0.33 Score=38.80 Aligned_cols=65 Identities=8% Similarity=0.104 Sum_probs=34.4
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecC--CEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGD--RTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
+.+++.|+.+ ..+.+||..+++|..+..+.........++..-+ +.+.+.|+.+. .+..+|..+.
T Consensus 67 g~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~------~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSYD-------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG------KVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEETT-------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS------EEEEEEBCSS
T ss_pred CCEEEEEcCC-------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC------cEEEEEecCC
Confidence 5566666643 4477889888776544332211111122222112 55666666543 3777777654
No 80
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.30 E-value=0.54 Score=37.40 Aligned_cols=166 Identities=10% Similarity=0.041 Sum_probs=81.1
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe-EEeC--CCCCCC
Q 048803 81 YRITVLELGSGE--WSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT-WRRG--ADMPGG 155 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~--~~~~~~ 155 (289)
..+..||+ +++ |+.-. +.... ........++++++..... ...++.+|+.... |+.- ......
T Consensus 56 ~~V~~~d~-~G~~~W~~~~--~~~~~---~~~~~~~~dG~~lv~~~~~------~~~v~~vd~~Gk~l~~~~~~~~~~~~ 123 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAA--PAGCE---MQTARILPDGNALVAWCGH------PSTILEVNMKGEVLSKTEFETGIERP 123 (276)
T ss_dssp SEEEEECT-TSCEEEEEEC--CTTCE---EEEEEECTTSCEEEEEEST------TEEEEEECTTSCEEEEEEECCSCSSG
T ss_pred CCEEEECC-CCCEEEEEcC--CCCcc---ccccEECCCCCEEEEecCC------CCEEEEEeCCCCEEEEEeccCCCCcc
Confidence 56888999 454 55332 11111 1112233456666654321 3457778874332 4321 111111
Q ss_pred CccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC-ceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccc
Q 048803 156 RRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD-EWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFER 234 (289)
Q Consensus 156 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~ 234 (289)
......++...+|.+++.... ...+.+||++-+ .|+.-.+ ..+ .......+|.+++.+... .
T Consensus 124 ~~~~~~v~~~~~G~~lv~~~~------~~~v~~~d~~G~~~w~~~~~-~~~--~~~~~~~~g~~~v~~~~~--------~ 186 (276)
T 3no2_A 124 HAQFRQINKNKKGNYLVPLFA------TSEVREIAPNGQLLNSVKLS-GTP--FSSAFLDNGDCLVACGDA--------H 186 (276)
T ss_dssp GGSCSCCEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECS-SCC--CEEEECTTSCEEEECBTT--------S
T ss_pred cccccCceECCCCCEEEEecC------CCEEEEECCCCCEEEEEECC-CCc--cceeEcCCCCEEEEeCCC--------C
Confidence 111223344347777766432 235899999833 4764322 111 112233477888776432 3
Q ss_pred eEEEEECCCCc--eeeccccccc-CCCCCCceeeeeCCeEEEEe
Q 048803 235 HAEAFDAAAQQ--WGPVEEDFME-TATCPRSCAGVDSNDLYMCR 275 (289)
Q Consensus 235 ~v~~yd~~~~~--W~~~~~~~~~-~~~~~~~~~~~~~~~ly~~G 275 (289)
.+..+|+++++ |+.-...... ....+.......++.+|+..
T Consensus 187 ~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 187 CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred eEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 68999999664 6654321111 11112222334688888887
No 81
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.24 E-value=1.5 Score=38.90 Aligned_cols=107 Identities=16% Similarity=0.204 Sum_probs=58.0
Q ss_pred eeEEEEEC-CCCC--eEeCCCCCCC-----CCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeC-
Q 048803 81 YRITVLEL-GSGE--WSELPPIPGF-----PDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRG- 149 (289)
Q Consensus 81 ~~~~~~d~-~~~~--W~~~~~~~~~-----~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~- 149 (289)
..++++|. .+++ |+.-...+.. .+. ......+..+++||+... ...++.+|..|++ |+.-
T Consensus 73 ~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~v~~~--------dg~l~alD~~tG~~~W~~~~ 143 (571)
T 2ad6_A 73 NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCD-VVDRGLAYGAGQIVKKQA--------NGHLLALDAKTGKINWEVEV 143 (571)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTC-SCCCCCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEeCCCCccEEEEEcCCCCcccccccccc-ccccccEEECCEEEEEeC--------CCEEEEEECCCCCEEEEecC
Confidence 57889999 7766 7754332211 000 001134567888888632 3458889998875 8643
Q ss_pred CCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc--eEe
Q 048803 150 ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE--WAS 198 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~ 198 (289)
.... ......+..++.++.+|+..+..+ ......+..||++|++ |+.
T Consensus 144 ~~~~-~~~~~~~~P~v~~g~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 144 CDPK-VGSTLTQAPFVAKDTVLMGCSGAE-LGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp CCGG-GTCBCCSCCEEETTEEEEECBCGG-GTCCCEEEEEETTTCCEEEEE
T ss_pred CCCC-ccceeccCCEEECCEEEEEecCCc-cCCCCEEEEEECCCCcEEEEE
Confidence 2211 000111122224888887643211 0112468999999874 864
No 82
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.23 E-value=0.77 Score=38.01 Aligned_cols=173 Identities=9% Similarity=-0.059 Sum_probs=84.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||+.+.+-......... -. .++. -++++++.|+ .+.+.+++..+++-.............
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~--V~----~v~fspdg~~l~s~s--------~~~~~~~~~~~~~~~~~~~~~~~~~~v 222 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGE--VK----DLHFSTDGKVVAYIT--------GSSLEVISTVTGSCIARKTDFDKNWSL 222 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSC--CC----EEEECTTSSEEEEEC--------SSCEEEEETTTCCEEEEECCCCTTEEE
T ss_pred CEEEEeECCCCcEEEEeCCCCc--eE----EEEEccCCceEEecc--------ceeEEEEEeccCcceeeeecCCCCCCE
Confidence 5688899988765433221111 11 2222 3455655554 234667777776643322222111112
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCC--CCccccccceEE--ECCEEEEEeeecCCCCCcccce
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPD--MSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~ 235 (289)
.+++..-++...+.++.+... ...+..+|........... +........++. -+|++++.|+.++ .
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~--------~ 292 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN--------S 292 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS--------C
T ss_pred EEEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC--------E
Confidence 223322377777777654421 1235666666555432211 111111111222 3788888887653 5
Q ss_pred EEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 236 AEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 236 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
|.+||..+.+- +...............+..++++++.|+.|.
T Consensus 293 V~iwd~~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 293 IALVKLKDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp EEEEETTTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEETTS
T ss_pred EEEEECCCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeCCC
Confidence 89999887652 2221001111111123356888888887664
No 83
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.20 E-value=1 Score=36.68 Aligned_cols=125 Identities=16% Similarity=0.186 Sum_probs=62.3
Q ss_pred cceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE
Q 048803 134 SSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF 213 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 213 (289)
..+.+||..+++-...-.-. .....+++..-++.+++.|+.+. .+..+|+.+..-... +.........+.
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~sg~~d~------~v~~wd~~~~~~~~~--~~~h~~~v~~v~ 233 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGH--TGDVMSLSLAPDTRLFVSGACDA------SAKLWDVREGMCRQT--FTGHESDINAIC 233 (340)
T ss_dssp SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEE--ECCCSSCEEEEE
T ss_pred CcEEEEECCCCcEEEEEcCC--CCceEEEEECCCCCEEEEEeCCC------cEEEEECCCCeeEEE--EcCCcCCEEEEE
Confidence 45788998887643221111 11123334333677888877654 388889887643211 110001111122
Q ss_pred --ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCc-eeeeeCCeEEEEeCce
Q 048803 214 --HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRS-CAGVDSNDLYMCREGD 278 (289)
Q Consensus 214 --~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~~ly~~GG~~ 278 (289)
-+++.++.|+.++ .|..||..+++-...-. ......... .....++++++.|+.+
T Consensus 234 ~~p~~~~l~s~s~d~--------~v~iwd~~~~~~~~~~~--~~~~~~~v~~~~~s~~g~~l~~g~~d 291 (340)
T 1got_B 234 FFPNGNAFATGSDDA--------TCRLFDLRADQELMTYS--HDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp ECTTSSEEEEEETTS--------CEEEEETTTTEEEEEEC--CTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred EcCCCCEEEEEcCCC--------cEEEEECCCCcEEEEEc--cCCcccceEEEEECCCCCEEEEECCC
Confidence 2677778877653 58889987764221111 111011111 1233567777777654
No 84
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.16 E-value=0.64 Score=42.97 Aligned_cols=166 Identities=8% Similarity=-0.042 Sum_probs=85.4
Q ss_pred EEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcccee
Q 048803 83 ITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFG 161 (289)
Q Consensus 83 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~ 161 (289)
+.+||+.+++++.... +..... ....+++.. ++.|++ |.. ..-+.+||+.+++++.............+
T Consensus 385 l~~~~~~~~~~~~~~~-~~~~~~-~~v~~i~~d~~g~lWi-gt~-------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 385 INVFENGKRVAIYNKE-NRELLS-NSVLCSLKDSEGNLWF-GTY-------LGNISYYNTRLKKFQIIELEKNELLDVRV 454 (781)
T ss_dssp EEEEETTEEEEECC------CCC-SBEEEEEECTTSCEEE-EET-------TEEEEEECSSSCEEEECCSTTTCCCCEEE
T ss_pred EEEEECCCCeEEEccC-CCCCCC-cceEEEEECCCCCEEE-Eec-------cCCEEEEcCCCCcEEEeccCCCCCCeEEE
Confidence 5667777666654421 111111 111233333 567776 321 24588999999999877532111122233
Q ss_pred EEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCc---cccccceEE--ECCEEEEEeeecCCCCCcccceE
Q 048803 162 CASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSR---ERDECKAVF--HCGKLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 162 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~---~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v 236 (289)
.....++.|++... ..+..||+.+++|......+. ......... -+|+|++... . ..+
T Consensus 455 i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~--------~Gl 517 (781)
T 3v9f_A 455 FYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G--------GGV 517 (781)
T ss_dssp EEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S--------SCE
T ss_pred EEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C--------CCE
Confidence 33333677777521 248999999988876533221 011111122 2567776532 1 248
Q ss_pred EEEECCCCceeecccccccCCCCCCceeee-eCCeEEEEeC
Q 048803 237 EAFDAAAQQWGPVEEDFMETATCPRSCAGV-DSNDLYMCRE 276 (289)
Q Consensus 237 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ly~~GG 276 (289)
.+||+.++++..+.... ........+++. .++.|++...
T Consensus 518 ~~~~~~~~~~~~~~~~~-~l~~~~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 518 GIYTPDMQLVRKFNQYE-GFCSNTINQIYRSSKGQMWLATG 557 (781)
T ss_dssp EEECTTCCEEEEECTTT-TCSCSCEEEEEECTTSCEEEEET
T ss_pred EEEeCCCCeEEEccCCC-CCCCCeeEEEEECCCCCEEEEEC
Confidence 88999998888765311 111112123333 4677888755
No 85
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.15 E-value=0.76 Score=37.49 Aligned_cols=166 Identities=15% Similarity=0.145 Sum_probs=82.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~ 158 (289)
..+.+||..+++-... +...... ..+++. -++.+++.|+.+ ..+.+||..+++-.. +.... ..
T Consensus 164 ~~i~~wd~~~~~~~~~--~~~h~~~---v~~~~~~~~~~~l~sg~~d-------~~v~~wd~~~~~~~~~~~~h~---~~ 228 (340)
T 1got_B 164 TTCALWDIETGQQTTT--FTGHTGD---VMSLSLAPDTRLFVSGACD-------ASAKLWDVREGMCRQTFTGHE---SD 228 (340)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSC---EEEEEECTTSSEEEEEETT-------SCEEEEETTTCSEEEEECCCS---SC
T ss_pred CcEEEEECCCCcEEEE--EcCCCCc---eEEEEECCCCCEEEEEeCC-------CcEEEEECCCCeeEEEEcCCc---CC
Confidence 4677888877653321 1111111 112222 245677777643 457888987765322 22111 11
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v 236 (289)
..+.+..-++..++.|+.+. .+..||..+.+-...-..+........+. -++++++.|+.++ .|
T Consensus 229 v~~v~~~p~~~~l~s~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~--------~i 294 (340)
T 1got_B 229 INAICFFPNGNAFATGSDDA------TCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF--------NC 294 (340)
T ss_dssp EEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS--------EE
T ss_pred EEEEEEcCCCCEEEEEcCCC------cEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC--------eE
Confidence 22333333677788877554 38889988764221111111111112222 2677777776542 68
Q ss_pred EEEECCCCceeecccccccCCCCCCcee-eeeCCeEEEEeCcee
Q 048803 237 EAFDAAAQQWGPVEEDFMETATCPRSCA-GVDSNDLYMCREGDV 279 (289)
Q Consensus 237 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~~ly~~GG~~~ 279 (289)
.+||..+.+ .+..+ ........++ +..+++.++.|+.|+
T Consensus 295 ~vwd~~~~~--~~~~~--~~h~~~v~~~~~s~dg~~l~s~s~D~ 334 (340)
T 1got_B 295 NVWDALKAD--RAGVL--AGHDNRVSCLGVTDDGMAVATGSWDS 334 (340)
T ss_dssp EEEETTTCC--EEEEE--ECCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEcccCc--EeeEe--ecCCCcEEEEEEcCCCCEEEEEcCCc
Confidence 899986654 22221 1111121233 235677777777664
No 86
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.11 E-value=0.35 Score=40.33 Aligned_cols=132 Identities=9% Similarity=0.037 Sum_probs=62.1
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEE-eCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWR-RGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+..+++|+. ...+.+||..+.+-. .+.... .....++..-++..++.|+.+. .+..||..+.+
T Consensus 217 ~~~~~~~~~-------~g~i~~~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~ 280 (425)
T 1r5m_A 217 DDKFVIPGP-------KGAIFVYQITEKTPTGKLIGHH---GPISVLEFNDTNKLLLSASDDG------TLRIWHGGNGN 280 (425)
T ss_dssp TTEEEEECG-------GGCEEEEETTCSSCSEEECCCS---SCEEEEEEETTTTEEEEEETTS------CEEEECSSSBS
T ss_pred CCEEEEEcC-------CCeEEEEEcCCCceeeeeccCC---CceEEEEECCCCCEEEEEcCCC------EEEEEECCCCc
Confidence 344556653 356888998876421 111111 1122333333666666666443 38888887653
Q ss_pred eE-eCCCCCccccccceEEE-CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEE
Q 048803 196 WA-SLPDMSRERDECKAVFH-CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYM 273 (289)
Q Consensus 196 W~-~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~ 273 (289)
-. .+..... .-...+.. ++ +++.++.+ ..+.+||..+.+-...-. .. ...........++++++
T Consensus 281 ~~~~~~~~~~--~i~~~~~~~~~-~l~~~~~d--------~~i~i~d~~~~~~~~~~~--~~-~~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 281 SQNCFYGHSQ--SIVSASWVGDD-KVISCSMD--------GSVRLWSLKQNTLLALSI--VD-GVPIFAGRISQDGQKYA 346 (425)
T ss_dssp CSEEECCCSS--CEEEEEEETTT-EEEEEETT--------SEEEEEETTTTEEEEEEE--CT-TCCEEEEEECTTSSEEE
T ss_pred cceEecCCCc--cEEEEEECCCC-EEEEEeCC--------CcEEEEECCCCcEeEecc--cC-CccEEEEEEcCCCCEEE
Confidence 21 1111111 11122222 55 56666543 368999987765322211 10 11111112234667777
Q ss_pred EeCce
Q 048803 274 CREGD 278 (289)
Q Consensus 274 ~GG~~ 278 (289)
+|+.+
T Consensus 347 ~~~~d 351 (425)
T 1r5m_A 347 VAFMD 351 (425)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 77654
No 87
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.05 E-value=0.11 Score=42.72 Aligned_cols=108 Identities=13% Similarity=0.217 Sum_probs=58.4
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCC-CCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPG-GRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~-~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++++++.||.+ ..+.+||..+++|.....+.. .......++..-++...+.|+.+. .+..+|..++
T Consensus 27 ~g~~las~~~D-------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~------~v~iw~~~~~ 93 (345)
T 3fm0_A 27 AGTLLASCGGD-------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA------TTCIWKKNQD 93 (345)
T ss_dssp TSSCEEEEETT-------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS------CEEEEEECCC
T ss_pred CCCEEEEEcCC-------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC------cEEEEEccCC
Confidence 45666666643 447788888887753322110 111122333323677777777654 3778888777
Q ss_pred ceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCC
Q 048803 195 EWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQ 244 (289)
Q Consensus 195 ~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~ 244 (289)
.+..+..+.........+.+ ++++++.|+.++ .|..||..+.
T Consensus 94 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~--------~v~iwd~~~~ 137 (345)
T 3fm0_A 94 DFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--------SVWVWEVDEE 137 (345)
T ss_dssp -EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECTT
T ss_pred CeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC--------eEEEEECCCC
Confidence 66544333211111122222 677778877653 5788888664
No 88
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.04 E-value=1.2 Score=36.60 Aligned_cols=168 Identities=14% Similarity=0.121 Sum_probs=82.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe---CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV---GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~ 157 (289)
..+.+||..+++-... +....... ..+... ++..++.|+.+ ..+.+||..+++....-... ..
T Consensus 176 ~~v~lwd~~~~~~~~~--~~~h~~~v---~~~~~~~~~~g~~l~sgs~D-------g~v~~wd~~~~~~~~~~~~h--~~ 241 (354)
T 2pbi_B 176 GTCALWDVESGQLLQS--FHGHGADV---LCLDLAPSETGNTFVSGGCD-------KKAMVWDMRSGQCVQAFETH--ES 241 (354)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSCE---EEEEECCCSSCCEEEEEETT-------SCEEEEETTTCCEEEEECCC--SS
T ss_pred CcEEEEeCCCCeEEEE--EcCCCCCe---EEEEEEeCCCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCC--CC
Confidence 5778899887764321 11111100 112111 34567777643 45788998887653322111 11
Q ss_pred cceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccce
Q 048803 158 MLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 158 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~ 235 (289)
...+++..-++..++.|+.+. .+..||+.+..-..+-...........+. .++++++.|+.++ .
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~--------~ 307 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDA------TCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY--------T 307 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS--------C
T ss_pred CeEEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC--------c
Confidence 122333323677777777554 38889988764221111111111112222 3677777776542 5
Q ss_pred EEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 236 AEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 236 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
|.+||..+++ .+..+ ..............+++.++.|+.|+
T Consensus 308 i~vwd~~~~~--~~~~l-~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 308 INVWDVLKGS--RVSIL-FGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp EEEEETTTCS--EEEEE-CCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEEECCCCc--eEEEE-ECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 8899986654 22221 11111111122345778888887664
No 89
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.93 E-value=0.26 Score=39.98 Aligned_cols=144 Identities=9% Similarity=-0.048 Sum_probs=73.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~ 158 (289)
..+++||+.+++...+...+. .. -..++. -++++|+....... ....+++||+.+++.+. +.... ....
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~-~~----~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d~~~~~~~~~~~~~~-~~~~ 136 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHK-AN----PAAIKIHKDGRLFVCYLGDFK---STGGIFAATENGDNLQDIIEDLS-TAYC 136 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSS-SS----EEEEEECTTSCEEEEECTTSS---SCCEEEEECTTSCSCEEEECSSS-SCCC
T ss_pred CEEEEEeCCCCcEEEEeeCCC-CC----cceEEECCCCcEEEEeCCCCC---CCceEEEEeCCCCEEEEEEccCc-cCCc
Confidence 578899998888765431111 11 112333 35678887542211 23568999998877542 22221 1122
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECC-EEEEEeeecCCCCCcccceE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCG-KLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~l~~~gG~~~~~~~~~~~~v 236 (289)
....+..-++++|+.............++.+|+.+++...+..- .......+. -++ .||+..... +.|
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~~--------~~i 206 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETTA--------NRL 206 (333)
T ss_dssp EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGGG--------TEE
T ss_pred ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCCC--------CeE
Confidence 23344434788888654321111234688899887766543210 001111222 244 477664321 357
Q ss_pred EEEECCC
Q 048803 237 EAFDAAA 243 (289)
Q Consensus 237 ~~yd~~~ 243 (289)
.+||+.+
T Consensus 207 ~~~d~~~ 213 (333)
T 2dg1_A 207 HRIALED 213 (333)
T ss_dssp EEEEECT
T ss_pred EEEEecC
Confidence 8888753
No 90
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.91 E-value=1.2 Score=35.82 Aligned_cols=149 Identities=15% Similarity=0.131 Sum_probs=70.1
Q ss_pred eeEEEEECCC-CCeEeCC--CCCCCCCCCCceeEEEE-e-CCEEEEEeCcCCCCcccccceEEEEcc--CCeEE---eCC
Q 048803 81 YRITVLELGS-GEWSELP--PIPGFPDGLPLFCQLSA-V-GPELVVIGGLDLTTWEASSSVFVFNII--SATWR---RGA 150 (289)
Q Consensus 81 ~~~~~~d~~~-~~W~~~~--~~~~~~~~~~~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~~~yd~~--t~~W~---~~~ 150 (289)
..+.+||..+ ++..... ....+....+. .++. - +..+|+.+.. ...+.+||.. +++++ ...
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~pdg~~l~~~~~~-------~~~i~~~~~~~~~g~~~~~~~~~ 221 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGAGPR--HMVFHPNEQYAYCVNEL-------NSSVDVWELKDPHGNIECVQTLD 221 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTCCEE--EEEECTTSSEEEEEETT-------TTEEEEEESSCTTSCCEEEEEEE
T ss_pred CEEEEEEecCCCceeeecccccccCCCCCcc--eEEECCCCCEEEEEeCC-------CCEEEEEEecCCCCcEEEEeecc
Confidence 4677888876 6554322 11111111110 1222 2 3357776532 3457788874 34432 222
Q ss_pred CCCCC---CccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcC--CCceEeCCCCCccccccceEE-ECCE-EEEEe
Q 048803 151 DMPGG---RRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVA--RDEWASLPDMSRERDECKAVF-HCGK-LLVIG 222 (289)
Q Consensus 151 ~~~~~---~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~~~-~~~~-l~~~g 222 (289)
.++.. .......+..-++ .+|+.+..+ ..+..||+. ++++..+..++........+. -+++ ||+.+
T Consensus 222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 222 MMPENFSDTRWAADIHITPDGRHLYACDRTA------SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp CSCTTCCSCCCEEEEEECTTSSEEEEEETTT------TEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEEC
T ss_pred ccCccccccCCccceEECCCCCEEEEEecCC------CEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEec
Confidence 22211 1112223332344 577665322 257888887 556665544333222122222 2454 55544
Q ss_pred eecCCCCCcccceEEEE--ECCCCceeecccc
Q 048803 223 GYSTNAQGRFERHAEAF--DAAAQQWGPVEED 252 (289)
Q Consensus 223 G~~~~~~~~~~~~v~~y--d~~~~~W~~~~~~ 252 (289)
+.+ +.+.+| |+++++++.+...
T Consensus 296 ~~~--------~~v~v~~~d~~~g~~~~~~~~ 319 (343)
T 1ri6_A 296 QKS--------HHISVYEIVGEQGLLHEKGRY 319 (343)
T ss_dssp TTT--------CEEEEEEEETTTTEEEEEEEE
T ss_pred CCC--------CeEEEEEEcCCCceeeEcccc
Confidence 322 234455 8888888888764
No 91
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.90 E-value=0.37 Score=39.72 Aligned_cols=139 Identities=14% Similarity=0.116 Sum_probs=66.4
Q ss_pred eeEEEEECCCCCeEeCCCC-CCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPI-PGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~ 157 (289)
..+.+||..+++-...... ...+... -.+++. -+++.++.|+.+ ..+.+||..+++-.. +.... ..
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~--V~~v~~spdg~~l~sgs~d-------~~i~iwd~~~~~~~~~~~~h~-~~- 171 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDI--VSTVSVLSSGTQAVSGSKD-------ICIKVWDLAQQVVLSSYRAHA-AQ- 171 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSC--EEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCS-SC-
T ss_pred CEEEEEeccCCCceeEeeccccCCCCC--EEEEEECCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCcC-Cc-
Confidence 4678888877653211110 0011111 012222 245666666643 347889998876432 22111 11
Q ss_pred cceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE---ECCEEEEEeeecCCCCCccc
Q 048803 158 MLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF---HCGKLLVIGGYSTNAQGRFE 233 (289)
Q Consensus 158 ~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~---~~~~l~~~gG~~~~~~~~~~ 233 (289)
....+...++ .+++.|+.+. .+..+|..+.+-...-...........+. .++++++.|+.++
T Consensus 172 -V~~~~~~~~~~~~l~s~s~D~------~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------- 237 (344)
T 4gqb_B 172 -VTCVAASPHKDSVFLSCSEDN------RILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG------- 237 (344)
T ss_dssp -EEEEEECSSCTTEEEEEETTS------CEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS-------
T ss_pred -eEEEEecCCCCCceeeecccc------ccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC-------
Confidence 1223322233 5777776554 38889988765322111111111111222 2566778876542
Q ss_pred ceEEEEECCCCc
Q 048803 234 RHAEAFDAAAQQ 245 (289)
Q Consensus 234 ~~v~~yd~~~~~ 245 (289)
.|..||..+++
T Consensus 238 -~v~~wd~~~~~ 248 (344)
T 4gqb_B 238 -TVSLVDTKSTS 248 (344)
T ss_dssp -EEEEEESCC--
T ss_pred -cEEEEECCCCc
Confidence 58889987654
No 92
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.89 E-value=0.23 Score=41.08 Aligned_cols=107 Identities=15% Similarity=0.150 Sum_probs=55.7
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecC-CEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGD-RTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
+++.++.|+.+ ..+.+||..+++-...-... .....+.+...+ +.+++.++.+. .+..+|+.+.
T Consensus 150 dg~~l~sgs~d-------g~v~iwd~~~~~~~~~~~~h--~~~v~~v~~s~~~~~~~~s~~~dg------~v~~wd~~~~ 214 (357)
T 4g56_B 150 DGTQAVSGGKD-------FSVKVWDLSQKAVLKSYNAH--SSEVNCVAACPGKDTIFLSCGEDG------RILLWDTRKP 214 (357)
T ss_dssp SSSEEEEEETT-------SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTCSSCEEEEETTS------CEEECCTTSS
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCC--CCCEEEEEEccCCCceeeeeccCC------ceEEEECCCC
Confidence 45666666643 44788999887643221111 111222333223 34666666543 3788888876
Q ss_pred ceEeCCCCCccccccceEEE---CCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 195 EWASLPDMSRERDECKAVFH---CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 195 ~W~~~~~~~~~~~~~~~~~~---~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+-...............+.+ ++++++.|+.++ .|..||..+.+
T Consensus 215 ~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~--------~i~~wd~~~~~ 260 (357)
T 4g56_B 215 KPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG--------NVSLVNIKNPD 260 (357)
T ss_dssp SCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS--------CEEEEESSCGG
T ss_pred ceeeeeeeccccccccchhhhhcccceEEEeeccc--------ceeEEECCCCc
Confidence 53322222211111222222 456777776543 58889987654
No 93
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.86 E-value=1.5 Score=36.63 Aligned_cols=93 Identities=12% Similarity=0.097 Sum_probs=49.8
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCcccc-ccceEEE--CCE-EEEEeeecCCCCCcccceEEEEECC
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERD-ECKAVFH--CGK-LLVIGGYSTNAQGRFERHAEAFDAA 242 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~-~~~~~~~--~~~-l~~~gG~~~~~~~~~~~~v~~yd~~ 242 (289)
++.+.+.|+.+. .+..||+.+.+-... +...+. ....+.+ +++ +++.|+.+ ..|.+||..
T Consensus 258 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~~g~~d--------g~i~vwd~~ 321 (420)
T 3vl1_A 258 YGKYVIAGHVSG------VITVHNVFSKEQTIQ--LPSKFTCSCNSLTVDGNNANYIYAGYEN--------GMLAQWDLR 321 (420)
T ss_dssp TTEEEEEEETTS------CEEEEETTTCCEEEE--ECCTTSSCEEEEEECSSCTTEEEEEETT--------SEEEEEETT
T ss_pred CCCEEEEEcCCC------eEEEEECCCCceeEE--cccccCCCceeEEEeCCCCCEEEEEeCC--------CeEEEEEcC
Confidence 566667666543 388999887642211 111111 1112222 454 77777654 268999998
Q ss_pred CCce--eecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 243 AQQW--GPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 243 ~~~W--~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
+.+- ..+.. .......++...++++++.|+.|+
T Consensus 322 ~~~~~~~~~~~----~~~~~v~~~~~~~~~~l~s~~~d~ 356 (420)
T 3vl1_A 322 SPECPVGEFLI----NEGTPINNVYFAAGALFVSSGFDT 356 (420)
T ss_dssp CTTSCSEEEEE----STTSCEEEEEEETTEEEEEETTTE
T ss_pred CCcCchhhhhc----cCCCCceEEEeCCCCEEEEecCCc
Confidence 7642 22221 112222345556888888888664
No 94
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.82 E-value=1.5 Score=36.48 Aligned_cols=141 Identities=9% Similarity=0.052 Sum_probs=69.0
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCC----CccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEc
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGG----RRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
+.+++.|+.+ ..+.+||..+.+-...-..... ......++..-++ .+++.|+.+.. ...+..||.
T Consensus 178 ~~~l~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~---~~~i~~~d~ 247 (416)
T 2pm9_A 178 AHVFASAGSS-------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN---DPSILIWDL 247 (416)
T ss_dssp TTEEEEESSS-------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS---SCCCCEEET
T ss_pred CcEEEEEcCC-------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC---CceEEEEeC
Confidence 4677777643 4588999988765433222200 1112233332243 56666654431 124888998
Q ss_pred CCCceEeCCCCCcccc-ccceEEE---CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASLPDMSRERD-ECKAVFH---CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~~~~~~~~~-~~~~~~~---~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
.+..- .+..+...+. ....+.+ ++++++.|+.++ .+..||..+.+-. .... .............
T Consensus 248 ~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg--------~v~~wd~~~~~~~--~~~~-~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 248 RNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN--------TVLLWNPESAEQL--SQFP-ARGNWCFKTKFAP 315 (416)
T ss_dssp TSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS--------EEEEECSSSCCEE--EEEE-CSSSCCCCEEECT
T ss_pred CCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC--------CEEEeeCCCCccc--eeec-CCCCceEEEEECC
Confidence 87531 1111210111 1122222 677788877643 6889998776432 2211 1111121222334
Q ss_pred CC-eEEEEeCcee
Q 048803 268 SN-DLYMCREGDV 279 (289)
Q Consensus 268 ~~-~ly~~GG~~~ 279 (289)
++ .+++.|+.|+
T Consensus 316 ~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 316 EAPDLFACASFDN 328 (416)
T ss_dssp TCTTEEEECCSSS
T ss_pred CCCCEEEEEecCC
Confidence 45 6777777653
No 95
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.80 E-value=0.78 Score=37.13 Aligned_cols=179 Identities=11% Similarity=0.021 Sum_probs=86.7
Q ss_pred eEEEEECCCCCeEeCCCCCCC-CCCCCceeEEEEe--CCEEEEEeCcCCCC----------cccccceEEEEccCCeEEe
Q 048803 82 RITVLELGSGEWSELPPIPGF-PDGLPLFCQLSAV--GPELVVIGGLDLTT----------WEASSSVFVFNIISATWRR 148 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~~~~~--~~~lyv~GG~~~~~----------~~~~~~~~~yd~~t~~W~~ 148 (289)
.+..+|+.++..+.+...... .... -..++.. ++.||+.-...... ......+++||+.+++.+.
T Consensus 102 ~i~~~d~~~g~~~~~~~~~~~~~~~~--p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 102 HLSVVGSEGGHATQLATSVDGVPFKW--LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp EEEEECTTCEECEEEESEETTEECSC--EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CEEEEeCCCCEEEEecccCCCCcccc--cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 467788876654443321111 1111 1133333 56899874321000 0123568999998887654
Q ss_pred CCC-CCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCCC---ceEeCCCCCccccccceEE-ECCEEEEEe
Q 048803 149 GAD-MPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVARD---EWASLPDMSRERDECKAVF-HCGKLLVIG 222 (289)
Q Consensus 149 ~~~-~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~~~~~-~~~~l~~~g 222 (289)
+.. +. ...+.+..-++ .+|+.-. ....+.+|++... ..+.+..++.| ..+++ -+|+||+..
T Consensus 180 ~~~~~~----~p~gia~~~dg~~lyv~d~------~~~~I~~~~~~~~~~~~~~~~~~~~gP---~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 180 LLKELH----VPGGAEVSADSSFVLVAEF------LSHQIVKYWLEGPKKGTAEVLVKIPNP---GNIKRNADGHFWVSS 246 (322)
T ss_dssp EEEEES----CCCEEEECTTSSEEEEEEG------GGTEEEEEESSSTTTTCEEEEEECSSE---EEEEECTTSCEEEEE
T ss_pred eccCCc----cCcceEECCCCCEEEEEeC------CCCeEEEEECCCCcCCccceEEeCCCC---CCeEECCCCCEEEEe
Confidence 421 22 12344543354 5888732 1246899998753 33332222211 12222 257899876
Q ss_pred eecCCCC--CcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 223 GYSTNAQ--GRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 223 G~~~~~~--~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
....... ......|.+||+....-..+....-...... .+++..+++||+.+.
T Consensus 247 ~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~-~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 247 SEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHF-EQIQEHDGLLYIGTL 301 (322)
T ss_dssp EEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCC-CEEEEETTEEEEECS
T ss_pred cCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccc-eEEEEeCCEEEEeec
Confidence 4311000 0012468999987554444433100001222 244556899999854
No 96
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.79 E-value=0.59 Score=37.80 Aligned_cols=70 Identities=19% Similarity=0.217 Sum_probs=41.0
Q ss_pred EeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcC
Q 048803 114 AVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVA 192 (289)
Q Consensus 114 ~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~ 192 (289)
..++++|+.++. ...++++|+.+++....-+.+. .......+..-++ .+|+.+..+ ..+..||+.
T Consensus 8 ~~~~~~~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~~~v~~~~~------~~i~~~d~~ 73 (349)
T 1jmx_B 8 KAGHEYMIVTNY-------PNNLHVVDVASDTVYKSCVMPD-KFGPGTAMMAPDNRTAYVLNNHY------GDIYGIDLD 73 (349)
T ss_dssp CTTCEEEEEEET-------TTEEEEEETTTTEEEEEEECSS-CCSSCEEEECTTSSEEEEEETTT------TEEEEEETT
T ss_pred cCCCEEEEEeCC-------CCeEEEEECCCCcEEEEEecCC-CCCCceeEECCCCCEEEEEeCCC------CcEEEEeCC
Confidence 346778887653 3568899999887543322221 0012334433355 577775322 358999998
Q ss_pred CCceE
Q 048803 193 RDEWA 197 (289)
Q Consensus 193 ~~~W~ 197 (289)
+++-.
T Consensus 74 t~~~~ 78 (349)
T 1jmx_B 74 TCKNT 78 (349)
T ss_dssp TTEEE
T ss_pred CCcEE
Confidence 87643
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.76 E-value=1 Score=37.50 Aligned_cols=109 Identities=11% Similarity=0.137 Sum_probs=56.4
Q ss_pred EEEEEeCcCCCCcccccceEEEEccCCeEEeCCC-CCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 118 ELVVIGGLDLTTWEASSSVFVFNIISATWRRGAD-MPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 118 ~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
.+++.|+.+ ..+.+||..+++....-. .. ......+++..-++..++.|+.+. .+..||+.+.+-
T Consensus 145 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~ 210 (402)
T 2aq5_A 145 NVLLSAGCD-------NVILVWDVGTGAAVLTLGPDV-HPDTIYSVDWSRDGALICTSCRDK------RVRVIEPRKGTV 210 (402)
T ss_dssp TEEEEEETT-------SCEEEEETTTTEEEEEECTTT-CCSCEEEEEECTTSSCEEEEETTS------EEEEEETTTTEE
T ss_pred CEEEEEcCC-------CEEEEEECCCCCccEEEecCC-CCCceEEEEECCCCCEEEEEecCC------cEEEEeCCCCce
Confidence 466666643 458899998887543221 11 111123333323676777766443 489999988653
Q ss_pred EeCC-CCCccc-cccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 197 ASLP-DMSRER-DECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 197 ~~~~-~~~~~~-~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
...- ...... .......-++++++.|..... -..+.+||..+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~-----d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 211 VAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMS-----ERQVALWDTKHLE 256 (402)
T ss_dssp EEEEECSSCSSSCCEEEECSTTEEEEEEECTTC-----CEEEEEEETTBCS
T ss_pred eeeeccCCCCCcceEEEEcCCCcEEEEeccCCC-----CceEEEEcCcccc
Confidence 2211 111111 111112236787777632111 1468999987754
No 98
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.70 E-value=1.7 Score=40.27 Aligned_cols=140 Identities=9% Similarity=0.091 Sum_probs=77.2
Q ss_pred eEEEEECCCCCeEeCCCCC--CCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCC---CCC
Q 048803 82 RITVLELGSGEWSELPPIP--GFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADM---PGG 155 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~~--~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---~~~ 155 (289)
-+++||+.+++++...... ........ .++.. -++.|++... .-+.+||+.++++ ..... ...
T Consensus 472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~i~~d~~g~lWigt~---------~Gl~~~~~~~~~~-~~~~~~~~~~l 540 (795)
T 4a2l_A 472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQI-TTLFRDSHKRLWIGGE---------EGLSVFKQEGLDI-QKASILPVSNV 540 (795)
T ss_dssp CEEEEETTTTEEEECCBCTTCCBCCCCCE-EEEEECTTCCEEEEES---------SCEEEEEEETTEE-EECCCSCSCGG
T ss_pred ceeEEeCCCCeEEEccccccccccCCceE-EEEEECCCCCEEEEeC---------CceEEEeCCCCeE-EEecCCCCCCC
Confidence 4678999999888775431 11111111 12222 3467777532 3488899998888 43211 100
Q ss_pred C-ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCC---CCccccccceEE-ECCEEEEEeeecCCCCC
Q 048803 156 R-RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPD---MSRERDECKAVF-HCGKLLVIGGYSTNAQG 230 (289)
Q Consensus 156 ~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~ 230 (289)
+ ....+.....+|.|++... . .+..||++++++..... ++... -.+.+. -+|+|++.+.
T Consensus 541 ~~~~i~~i~~d~~g~lWigT~-~-------Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~------- 604 (795)
T 4a2l_A 541 TKLFTNCIYEASNGIIWVGTR-E-------GFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN------- 604 (795)
T ss_dssp GGSCEEEEEECTTSCEEEEES-S-------CEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-------
T ss_pred CCCeeEEEEECCCCCEEEEeC-C-------CceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-------
Confidence 1 1112233323677777522 1 38899999998876532 22211 111222 2577887762
Q ss_pred cccceEEEEECCCCceeeccc
Q 048803 231 RFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 231 ~~~~~v~~yd~~~~~W~~~~~ 251 (289)
+.+.+||++++++.....
T Consensus 605 ---~Gl~~~~~~~~~~~~~~~ 622 (795)
T 4a2l_A 605 ---RGISCFNPETEKFRNFTE 622 (795)
T ss_dssp ---TEEEEEETTTTEEEEECG
T ss_pred ---CceEEEcCCCCcEEEcCC
Confidence 258899999998877643
No 99
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.67 E-value=0.68 Score=36.82 Aligned_cols=160 Identities=13% Similarity=0.027 Sum_probs=81.4
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCCC
Q 048803 81 YRITVLELGSGE--WSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~ 156 (289)
..++++|+.+++ |+.-.+ .....+ ...+.-++++++. + ...+..||+ +++ |+.-.+. .
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~--~~~~~~---~~~~~pdG~ilvs-~--------~~~V~~~d~-~G~~~W~~~~~~---~ 76 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLE--KGWECN---SVAATKAGEILFS-Y--------SKGAKMITR-DGRELWNIAAPA---G 76 (276)
T ss_dssp SEEEEEETTTTEEEEEEECC--TTCCCC---EEEECTTSCEEEE-C--------BSEEEEECT-TSCEEEEEECCT---T
T ss_pred CEEEEEECCCCeEEEEeCCC--ccCCCc---CeEECCCCCEEEe-C--------CCCEEEECC-CCCEEEEEcCCC---C
Confidence 578899997776 553322 111111 1334457788773 2 244888999 554 7644321 1
Q ss_pred ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC-ceEeC-C-CCCcccc--ccceEEECCEEEEEeeecCCCCCc
Q 048803 157 RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD-EWASL-P-DMSRERD--ECKAVFHCGKLLVIGGYSTNAQGR 231 (289)
Q Consensus 157 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~-~-~~~~~~~--~~~~~~~~~~l~~~gG~~~~~~~~ 231 (289)
...+++....+|.+++..... ...+..+|+..+ .|+.- . ..+.+.. .......+|.+++....+
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~------ 145 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT------ 145 (276)
T ss_dssp CEEEEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT------
T ss_pred ccccccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC------
Confidence 123344554578777764321 125778887544 35422 1 1111111 112233467766654321
Q ss_pred ccceEEEEECCCC-ceeecccccccCCCCCCceeeeeCCeEEEEeCc
Q 048803 232 FERHAEAFDAAAQ-QWGPVEEDFMETATCPRSCAGVDSNDLYMCREG 277 (289)
Q Consensus 232 ~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~ 277 (289)
..|.+||++.+ .|+.-.. ..+.......++++++.+..
T Consensus 146 --~~v~~~d~~G~~~w~~~~~------~~~~~~~~~~~g~~~v~~~~ 184 (276)
T 3no2_A 146 --SEVREIAPNGQLLNSVKLS------GTPFSSAFLDNGDCLVACGD 184 (276)
T ss_dssp --TEEEEECTTSCEEEEEECS------SCCCEEEECTTSCEEEECBT
T ss_pred --CEEEEECCCCCEEEEEECC------CCccceeEcCCCCEEEEeCC
Confidence 36899999733 3654322 11222333457777777654
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.65 E-value=0.68 Score=38.71 Aligned_cols=138 Identities=12% Similarity=0.104 Sum_probs=68.6
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEE-eCCCCCCCCccceeEEEec-CCEEEEEcC-CCCCCcccCceEEEEcC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWR-RGADMPGGRRMLFGCASDG-DRTVYVAGG-HDEDKNALKSAMAYDVA 192 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~~-~~~iyv~GG-~~~~~~~~~~~~~yd~~ 192 (289)
++..++.|+.+ ..+.+||..+.+-. .+.... .. ..+.+..- +..+++.|+ ..+ ..+..||..
T Consensus 228 ~~~~l~s~~~d-------~~v~iwd~~~~~~~~~~~~~~-~~--v~~~~~~p~~~~ll~~~~gs~d-----~~i~i~d~~ 292 (401)
T 4aez_A 228 DGLQLASGGND-------NVVQIWDARSSIPKFTKTNHN-AA--VKAVAWCPWQSNLLATGGGTMD-----KQIHFWNAA 292 (401)
T ss_dssp TSSEEEEEETT-------SCEEEEETTCSSEEEEECCCS-SC--CCEEEECTTSTTEEEEECCTTT-----CEEEEEETT
T ss_pred CCCEEEEEeCC-------CeEEEccCCCCCccEEecCCc-ce--EEEEEECCCCCCEEEEecCCCC-----CEEEEEECC
Confidence 45666666643 45888998876532 222222 11 22233322 446777764 222 248899988
Q ss_pred CCceEeCCCCCccccccceEEE--CCE-EEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCC
Q 048803 193 RDEWASLPDMSRERDECKAVFH--CGK-LLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSN 269 (289)
Q Consensus 193 ~~~W~~~~~~~~~~~~~~~~~~--~~~-l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 269 (289)
+.+-...-... .....+.+ +++ +++.+|... +.+.+||..+.+...+.... .............++
T Consensus 293 ~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~g~~d-------g~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg 361 (401)
T 4aez_A 293 TGARVNTVDAG---SQVTSLIWSPHSKEIMSTHGFPD-------NNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDG 361 (401)
T ss_dssp TCCEEEEEECS---SCEEEEEECSSSSEEEEEECTTT-------CEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTS
T ss_pred CCCEEEEEeCC---CcEEEEEECCCCCeEEEEeecCC-------CcEEEEecCCccceeEEEec-CCCCCEEEEEECCCC
Confidence 76533211111 11122222 444 444434322 36889998887766554321 111122222334577
Q ss_pred eEEEEeCcee
Q 048803 270 DLYMCREGDV 279 (289)
Q Consensus 270 ~ly~~GG~~~ 279 (289)
+.++.||.|+
T Consensus 362 ~~l~s~~~dg 371 (401)
T 4aez_A 362 RILSTAASDE 371 (401)
T ss_dssp SEEEEECTTS
T ss_pred CEEEEEeCCC
Confidence 7777777554
No 101
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.64 E-value=1.1 Score=35.54 Aligned_cols=169 Identities=9% Similarity=-0.031 Sum_probs=82.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCC--c
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGR--R 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~--~ 157 (289)
..+++||+.++ .+.+.. +.. . -..++. -++++|+... ....+.+||+.+++.+.+....... .
T Consensus 50 ~~i~~~~~~~~-~~~~~~-~~~---~--~~~l~~~~dg~l~v~~~-------~~~~i~~~d~~~g~~~~~~~~~~~~~~~ 115 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMH-PSH---H--QNGHCLNKQGHLIACSH-------GLRRLERQREPGGEWESIADSFEGKKLN 115 (296)
T ss_dssp TEEEEEETTSC-EEEEES-SCS---S--EEEEEECTTCCEEEEET-------TTTEEEEECSTTCCEEEEECEETTEECC
T ss_pred CEEEEEECCCC-eEEEEC-CCC---C--cceeeECCCCcEEEEec-------CCCeEEEEcCCCCcEEEEeeccCCCCCC
Confidence 47888999887 554432 111 1 012333 3567887643 1356889999888876553221111 1
Q ss_pred cceeEEEecCCEEEEE----cCCCC-------CCcccCceEEEEcCCCceEeCC-CCCccccccceEE-ECCEEEEEeee
Q 048803 158 MLFGCASDGDRTVYVA----GGHDE-------DKNALKSAMAYDVARDEWASLP-DMSRERDECKAVF-HCGKLLVIGGY 224 (289)
Q Consensus 158 ~~~~~~~~~~~~iyv~----GG~~~-------~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~-~~~~l~~~gG~ 224 (289)
.....+..-+|++|+. |.... .......++.||+. ++...+. .+..+ .+.+. -+++++ +...
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~dg~~l-v~~~ 190 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP---NGLAFLPSGNLL-VSDT 190 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE---EEEEECTTSCEE-EEET
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC---ccEEECCCCCEE-EEeC
Confidence 1223444448889997 33110 00112368888887 5444332 12111 12222 256666 4332
Q ss_pred cCCCCCcccceEEEEECC-CCce-eecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 225 STNAQGRFERHAEAFDAA-AQQW-GPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 225 ~~~~~~~~~~~v~~yd~~-~~~W-~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
. .+.|++||+. +++. ...... ......+...+...+++||+..+
T Consensus 191 ~-------~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~~ 236 (296)
T 3e5z_A 191 G-------DNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASAG 236 (296)
T ss_dssp T-------TTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEET
T ss_pred C-------CCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEcC
Confidence 2 1368888876 4454 211111 01111222223335777887764
No 102
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.61 E-value=1.6 Score=36.12 Aligned_cols=173 Identities=12% Similarity=0.087 Sum_probs=85.5
Q ss_pred eeEEEEECCCCCeEeCC--CCCCCCCCCCceeEEEE--eCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCC
Q 048803 81 YRITVLELGSGEWSELP--PIPGFPDGLPLFCQLSA--VGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPG 154 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~--~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~ 154 (289)
..+.+||..+++-.... ..+...... ...+.. .++.+++.|+.+ ..+.+||..... -..+....
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~l~sgs~D-------~~v~~wd~~~~~~~~~~~~~h~- 249 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTAD--VLSLSINSLNANMFISGSCD-------TTVRLWDLRITSRAVRTYHGHE- 249 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSC--EEEEEECSSSCCEEEEEETT-------SCEEEEETTTTCCCCEEECCCS-
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccC--eEEEEeecCCCCEEEEEECC-------CeEEEEECCCCCcceEEECCcC-
Confidence 56788999887644322 122212111 112222 256777777754 447788876321 12222111
Q ss_pred CCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeC-CCCC---c-cccccceE--EECCEEEEEeeecCC
Q 048803 155 GRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASL-PDMS---R-ERDECKAV--FHCGKLLVIGGYSTN 227 (289)
Q Consensus 155 ~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~~---~-~~~~~~~~--~~~~~l~~~gG~~~~ 227 (289)
.. ..+++..-++..++.|+.+. .+..+|+.++.-... ...+ . .......+ ..++++++.|+.+
T Consensus 250 ~~--v~~v~~~p~~~~l~s~s~D~------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-- 319 (380)
T 3iz6_a 250 GD--INSVKFFPDGQRFGTGSDDG------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-- 319 (380)
T ss_dssp SC--CCEEEECTTSSEEEEECSSS------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT--
T ss_pred CC--eEEEEEecCCCeEEEEcCCC------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC--
Confidence 11 12333333777888887654 388899887643221 1111 0 01111222 2367777777554
Q ss_pred CCCcccceEEEEECCCCceee-cccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 228 AQGRFERHAEAFDAAAQQWGP-VEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 228 ~~~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
..|.+||..+.+-.. +..................+++.++.|+.|+
T Consensus 320 ------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 320 ------GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp ------SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred ------CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 258999987765432 2211111111122123346788888888764
No 103
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.54 E-value=1.3 Score=37.56 Aligned_cols=134 Identities=12% Similarity=0.111 Sum_probs=69.5
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
.++..++.|+.+ ..+.+||..+.+-...-... .......+...++...+.|+.+. .+..||..+.
T Consensus 278 ~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~sg~~dg------~i~vwd~~~~ 342 (464)
T 3v7d_B 278 GHGNIVVSGSYD-------NTLIVWDVAQMKCLYILSGH--TDRIYSTIYDHERKRCISASMDT------TIRIWDLENG 342 (464)
T ss_dssp EETTEEEEEETT-------SCEEEEETTTTEEEEEECCC--SSCEEEEEEETTTTEEEEEETTS------CEEEEETTTT
T ss_pred CCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCC--CCCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCC
Confidence 344555555533 45888998877643221111 11122333333666777766543 3889998876
Q ss_pred ceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEE
Q 048803 195 EWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMC 274 (289)
Q Consensus 195 ~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~ 274 (289)
+-.. .+.........+.++++.++.|+.++ .+.+||..+..-..... ............++++++.
T Consensus 343 ~~~~--~~~~h~~~v~~~~~~~~~l~s~s~dg--------~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~ 408 (464)
T 3v7d_B 343 ELMY--TLQGHTALVGLLRLSDKFLVSAAADG--------SIRGWDANDYSRKFSYH----HTNLSAITTFYVSDNILVS 408 (464)
T ss_dssp EEEE--EECCCSSCEEEEEECSSEEEEEETTS--------EEEEEETTTCCEEEEEE----CTTCCCEEEEEECSSEEEE
T ss_pred cEEE--EEeCCCCcEEEEEEcCCEEEEEeCCC--------cEEEEECCCCceeeeec----CCCCccEEEEEeCCCEEEE
Confidence 4221 11111112233445677777777653 68999998764222111 1111222234557777777
Q ss_pred eCc
Q 048803 275 REG 277 (289)
Q Consensus 275 GG~ 277 (289)
|+.
T Consensus 409 ~~d 411 (464)
T 3v7d_B 409 GSE 411 (464)
T ss_dssp EET
T ss_pred ecC
Confidence 763
No 104
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=94.54 E-value=1.4 Score=36.67 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=68.2
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEE-----eCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEE
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWR-----RGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAY 189 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~-----~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~y 189 (289)
++.+++.|+.+ ..+.+||..++... .+..+.........++..-++ .+++.|+.+. .+..+
T Consensus 93 ~~~~l~s~s~d-------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg------~i~iw 159 (402)
T 2aq5_A 93 NDNVIASGSED-------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN------VILVW 159 (402)
T ss_dssp CTTEEEEEETT-------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS------CEEEE
T ss_pred CCCEEEEEeCC-------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC------EEEEE
Confidence 56677777643 45788888776431 111111011111223322244 5777776543 48899
Q ss_pred EcCCCceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 190 DVARDEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 190 d~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
|..+++....-...........+.+ ++++++.|+.+ ..+.+||+.+++-...-.. ..............
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~ 230 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD--------KRVRVIEPRKGTVVAEKDR-PHEGTRPVHAVFVS 230 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT--------SEEEEEETTTTEEEEEEEC-SSCSSSCCEEEECS
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC--------CcEEEEeCCCCceeeeecc-CCCCCcceEEEEcC
Confidence 9988754322100101111122222 67777777654 3689999987653322100 11111122234456
Q ss_pred CCeEEEEe
Q 048803 268 SNDLYMCR 275 (289)
Q Consensus 268 ~~~ly~~G 275 (289)
+++++++|
T Consensus 231 ~~~~l~~g 238 (402)
T 2aq5_A 231 EGKILTTG 238 (402)
T ss_dssp TTEEEEEE
T ss_pred CCcEEEEe
Confidence 78888887
No 105
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.53 E-value=2.4 Score=38.41 Aligned_cols=109 Identities=16% Similarity=0.241 Sum_probs=58.9
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCC----CCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCC
Q 048803 81 YRITVLELGSGE--WSELPPIPGFP----DGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADM 152 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~----~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~ 152 (289)
..++++|..+++ |+.-...+... .........+..+++||+... ...++.+|..|++ |+.-..-
T Consensus 76 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------dg~l~alD~~tG~~~W~~~~~~ 147 (668)
T 1kv9_A 76 SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--------DGRLIALDAKTGKAIWSQQTTD 147 (668)
T ss_dssp GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------TSEEEEEETTTCCEEEEEECSC
T ss_pred CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------CCEEEEEECCCCCEeeeeccCC
Confidence 578899998776 77544332110 000001134557888887532 3468899998876 8754321
Q ss_pred CCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc--eEe
Q 048803 153 PGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE--WAS 198 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~ 198 (289)
+.......+..++.++.+|+..+..+ ......+..||.+|++ |+.
T Consensus 148 ~~~~~~~~~~P~v~~~~v~vg~~~~~-~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 148 PAKPYSITGAPRVVKGKVIIGNGGAE-YGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp TTSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEEE
T ss_pred CCCcceecCCCEEECCEEEEeCCCCC-cCCCCEEEEEECCCCcEEEEe
Confidence 10111111222224888887533211 1123469999999874 874
No 106
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.50 E-value=1.2 Score=37.04 Aligned_cols=94 Identities=11% Similarity=0.067 Sum_probs=46.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeE-EeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATW-RRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~ 158 (289)
..+.+||..+++-..... ..... -.+++.. ++++++.|+.+ ..+.+||..+.+- ..+.... ..
T Consensus 119 g~i~iwd~~~~~~~~~~~--~h~~~---v~~~~~~~~~~~l~s~s~d-------~~i~iwd~~~~~~~~~~~~h~---~~ 183 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQ--AHVSE---ITKLKFFPSGEALISSSQD-------MQLKIWSVKDGSNPRTLIGHR---AT 183 (420)
T ss_dssp SCEEEECTTSCEEEEETT--SSSSC---EEEEEECTTSSEEEEEETT-------SEEEEEETTTCCCCEEEECCS---SC
T ss_pred CCEEEEeCCCcceeeecc--cccCc---cEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCcCceEEcCCC---Cc
Confidence 467788887665433211 11111 1122222 45566666533 4578889876542 1121111 11
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
..+.+..-++..++.|+.+. .+..||+.+.+
T Consensus 184 v~~~~~~~~~~~l~s~~~d~------~v~iwd~~~~~ 214 (420)
T 3vl1_A 184 VTDIAIIDRGRNVLSASLDG------TIRLWECGTGT 214 (420)
T ss_dssp EEEEEEETTTTEEEEEETTS------CEEEEETTTTE
T ss_pred EEEEEEcCCCCEEEEEcCCC------cEEEeECCCCc
Confidence 22333323666666766543 37888888764
No 107
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.43 E-value=0.88 Score=36.26 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=45.5
Q ss_pred CEEEEEcCCCCCCcccCceEEEEcCCCc--eEeCCCCCccccccceEEE--C---CEEEEEeeecCCCCCcccceEEEEE
Q 048803 168 RTVYVAGGHDEDKNALKSAMAYDVARDE--WASLPDMSRERDECKAVFH--C---GKLLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 168 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~--~---~~l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
+++++.|+.+. .+..+|..+.. |..+..+.........+.+ + +++++.|+.++ .|..||
T Consensus 170 ~~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~--------~v~iWd 235 (297)
T 2pm7_B 170 SRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDR--------TCIIWT 235 (297)
T ss_dssp CCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTS--------CEEEEE
T ss_pred cceEEEEcCCC------cEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCC--------cEEEEE
Confidence 45677776554 36777776543 5433222211111112222 2 47777777653 577788
Q ss_pred CCCC--ceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 241 AAAQ--QWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 241 ~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
..+. .|.....................++++++.||.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~ 276 (297)
T 2pm7_B 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDN 276 (297)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTS
T ss_pred eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCC
Confidence 7653 35432110000001111112235677777776553
No 108
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.41 E-value=0.59 Score=43.02 Aligned_cols=135 Identities=8% Similarity=0.044 Sum_probs=67.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~ 159 (289)
..+.+||..+++....-. ..... .......-++..+++|+. ...+.+||..+++... +.... .. .
T Consensus 35 g~v~iwd~~~~~~~~~~~--~~~~~--v~~~~~s~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~~-~~--v 100 (814)
T 3mkq_A 35 GRVEIWNYETQVEVRSIQ--VTETP--VRAGKFIARKNWIIVGSD-------DFRIRVFNYNTGEKVVDFEAHP-DY--I 100 (814)
T ss_dssp SEEEEEETTTTEEEEEEE--CCSSC--EEEEEEEGGGTEEEEEET-------TSEEEEEETTTCCEEEEEECCS-SC--E
T ss_pred CEEEEEECCCCceEEEEe--cCCCc--EEEEEEeCCCCEEEEEeC-------CCeEEEEECCCCcEEEEEecCC-CC--E
Confidence 478889988765432211 11111 111222334556666653 3458889988877533 22222 11 2
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC-ceEeCCCCCccccccce-EEE--CCEEEEEeeecCCCCCcccce
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD-EWASLPDMSRERDECKA-VFH--CGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~-~~~--~~~l~~~gG~~~~~~~~~~~~ 235 (289)
...+..-++...+.|+.+. .+..||..++ ..... +......... +.. ++.++++|+.++ .
T Consensus 101 ~~~~~s~~~~~l~~~~~dg------~i~vw~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~dg--------~ 164 (814)
T 3mkq_A 101 RSIAVHPTKPYVLSGSDDL------TVKLWNWENNWALEQT--FEGHEHFVMCVAFNPKDPSTFASGCLDR--------T 164 (814)
T ss_dssp EEEEECSSSSEEEEEETTS------EEEEEEGGGTSEEEEE--EECCSSCEEEEEEETTEEEEEEEEETTS--------E
T ss_pred EEEEEeCCCCEEEEEcCCC------EEEEEECCCCceEEEE--EcCCCCcEEEEEEEcCCCCEEEEEeCCC--------e
Confidence 2333323565566655432 4888888765 22211 1111111112 222 466777776542 6
Q ss_pred EEEEECCCCc
Q 048803 236 AEAFDAAAQQ 245 (289)
Q Consensus 236 v~~yd~~~~~ 245 (289)
|.+||..+.+
T Consensus 165 v~vwd~~~~~ 174 (814)
T 3mkq_A 165 VKVWSLGQST 174 (814)
T ss_dssp EEEEETTCSS
T ss_pred EEEEECCCCc
Confidence 8899987654
No 109
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=94.37 E-value=0.84 Score=36.78 Aligned_cols=139 Identities=9% Similarity=0.139 Sum_probs=65.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-C--CEEEEEeCcCCCCcccccceEEEEccCC-eEEeCCCCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-G--PELVVIGGLDLTTWEASSSVFVFNIISA-TWRRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~--~~lyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~ 156 (289)
..+.+||..+++|..+..+....... .+++.. + +.+++.|+.+ ..+.+||..+. .|.....+....
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h~~~V---~~v~~~p~~~g~~lasgs~D-------~~i~lwd~~~~~~~~~~~~~~~h~ 150 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGHDSSV---NSVCWAPHDYGLILACGSSD-------GAISLLTYTGEGQWEVKKINNAHT 150 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCCSSCC---CEEEECCTTTCSCEEEECSS-------SCEEEEEECSSSCEEECCBTTSSS
T ss_pred CEEEEEECCCCcceEEEEccCCCCce---EEEEECCCCCCcEEEEEcCC-------CCEEEEecCCCCCcceeeeecccc
Confidence 56788898877664433222211111 122222 2 4566676644 34667777665 465433222101
Q ss_pred ccceeEEEecC-----------------CEEEEEcCCCCCCcccCceEEEEcCC-CceEeCCCCCccccccceEEE--C-
Q 048803 157 RMLFGCASDGD-----------------RTVYVAGGHDEDKNALKSAMAYDVAR-DEWASLPDMSRERDECKAVFH--C- 215 (289)
Q Consensus 157 ~~~~~~~~~~~-----------------~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~--~- 215 (289)
......+...+ +..++.|+.+. .+..+|..+ +.|..+..+.........+.+ +
T Consensus 151 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 151 IGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN------LIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSI 224 (316)
T ss_dssp SCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS------BCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCS
T ss_pred CCcceEEEccccCCccccccccccCccccceEEEecCCC------eEEEEEeCCCCccceeeecccCCCceEEEEecCCC
Confidence 00111111001 24556665443 366777764 457655444321111112222 2
Q ss_pred ---CEEEEEeeecCCCCCcccceEEEEECCC
Q 048803 216 ---GKLLVIGGYSTNAQGRFERHAEAFDAAA 243 (289)
Q Consensus 216 ---~~l~~~gG~~~~~~~~~~~~v~~yd~~~ 243 (289)
+++++.|+.++ .|..||..+
T Consensus 225 ~~~~~~las~s~D~--------~v~iw~~~~ 247 (316)
T 3bg1_A 225 GLPTSTIASCSQDG--------RVFIWTCDD 247 (316)
T ss_dssp SCSCCEEEEEETTC--------EEEEEECSS
T ss_pred CCCCceEEEEcCCC--------eEEEEEccC
Confidence 26677776653 578888765
No 110
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.35 E-value=0.35 Score=39.00 Aligned_cols=145 Identities=12% Similarity=-0.030 Sum_probs=65.9
Q ss_pred eeEEEEECC-CCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEcc--CCeEEeCCCCCCCCc
Q 048803 81 YRITVLELG-SGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNII--SATWRRGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~--t~~W~~~~~~~~~~~ 157 (289)
..+.+||.. +++.+.+..++...... ..+....+..||+.+.. ...+.+|+.. +++++.+..++...
T Consensus 15 ~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~spdg~~l~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~~- 84 (343)
T 1ri6_A 15 QQIHVWNLNHEGALTLTQVVDVPGQVQ--PMVVSPDKRYLYVGVRP-------EFRVLAYRIAPDDGALTFAAESALPG- 84 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSCCC--CEEECTTSSEEEEEETT-------TTEEEEEEECTTTCCEEEEEEEECSS-
T ss_pred CeEEEEEECCCCcEEEeeeEecCCCCc--eEEECCCCCEEEEeecC-------CCeEEEEEecCCCCceeeccccccCC-
Confidence 467778774 44444433222222111 01111123456665432 2456777765 77776554333111
Q ss_pred cceeEEEecCCE-EEEEcCCCCCCcccCceEEEEcCCCc-eEeCCCCCccccccceEE-ECC-EEEEEeeecCCCCCccc
Q 048803 158 MLFGCASDGDRT-VYVAGGHDEDKNALKSAMAYDVARDE-WASLPDMSRERDECKAVF-HCG-KLLVIGGYSTNAQGRFE 233 (289)
Q Consensus 158 ~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~-~~~-~l~~~gG~~~~~~~~~~ 233 (289)
.....+..-+++ +|+.+..+ ..+..||+..+. ...+...+........+. -++ .+|+.+..+
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------- 150 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ-------- 150 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG--------
T ss_pred CCcEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC--------
Confidence 223344333554 66654322 247888874221 222211111111122222 244 466554222
Q ss_pred ceEEEEECCC-Cceeec
Q 048803 234 RHAEAFDAAA-QQWGPV 249 (289)
Q Consensus 234 ~~v~~yd~~~-~~W~~~ 249 (289)
+.+.+||..+ ++...+
T Consensus 151 ~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp TEEEEEEECTTSCEEEE
T ss_pred CEEEEEEecCCCceeee
Confidence 3689999887 666543
No 111
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.18 E-value=3.2 Score=37.76 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=59.3
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCC----CCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCC-
Q 048803 81 YRITVLELGSGE--WSELPPIPGFP----DGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGAD- 151 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~----~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~- 151 (289)
..++++|..+++ |+.-...+... +........+..++.||+... -..++.+|..|++ |+.-..
T Consensus 80 ~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--------dg~l~AlDa~TG~~~W~~~~~~ 151 (689)
T 1yiq_A 80 SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--------DGRLEAIDAKTGQRAWSVDTRA 151 (689)
T ss_dssp GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------TSEEEEEETTTCCEEEEEECCS
T ss_pred CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------CCEEEEEECCCCCEeeeecCcC
Confidence 578899998776 77544332110 000001134567888887532 3458889998876 875432
Q ss_pred CCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc--eEe
Q 048803 152 MPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE--WAS 198 (289)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~ 198 (289)
-+.......+..++.++.+|+..+..+. .....+..||.+|++ |+.
T Consensus 152 ~~~~~~~~~~sP~v~~g~v~vg~~~~~~-~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 152 DHKRSYTITGAPRVVNGKVVIGNGGAEF-GVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp CTTSCCBCCSCCEEETTEEEECCBCTTT-CCBCEEEEEETTTCCEEEEE
T ss_pred CCCCCccccCCcEEECCEEEEEeCCCcc-CCCCEEEEEECCCCcEEEEe
Confidence 1101111112222248888774332111 123469999999875 874
No 112
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.06 E-value=2 Score=34.85 Aligned_cols=150 Identities=12% Similarity=0.110 Sum_probs=77.8
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCC-------CCCCccceeEEEecC-CEEEEEcCCCCCCcccCceE
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADM-------PGGRRMLFGCASDGD-RTVYVAGGHDEDKNALKSAM 187 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~-------~~~~~~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~ 187 (289)
++.||+..++ ....+.+||+....-..+... +.......+.++.-+ +.|||..... ..+.
T Consensus 154 ~g~lyv~d~~------~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~------~~I~ 221 (329)
T 3fvz_A 154 TGAVFVSDGY------CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN------GRIQ 221 (329)
T ss_dssp TCCEEEEECS------SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT------TEEE
T ss_pred CCeEEEEeCC------CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC------CEEE
Confidence 6789998752 135688898654433333211 101112345555445 8999985432 3599
Q ss_pred EEEcCCCceEeC-CCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeee
Q 048803 188 AYDVARDEWASL-PDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV 266 (289)
Q Consensus 188 ~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 266 (289)
+||+.+++.... ............+...+.+|...|.....+ .....+.++|..+++....-.........+...++.
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~-~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGD-QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTC-SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEecc-CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 999997765432 211111111122333467777766533211 122468999988876544321101111222222334
Q ss_pred eCCeEEEEeCce
Q 048803 267 DSNDLYMCREGD 278 (289)
Q Consensus 267 ~~~~ly~~GG~~ 278 (289)
.++.||+....+
T Consensus 301 ~dG~lyvad~~~ 312 (329)
T 3fvz_A 301 EDGTVYIGDAHT 312 (329)
T ss_dssp TTSEEEEEESSS
T ss_pred CCCCEEEEECCC
Confidence 577899987543
No 113
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.01 E-value=1.7 Score=36.49 Aligned_cols=135 Identities=13% Similarity=0.184 Sum_probs=67.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||..+++.... +...... -..++. -++++++.|+.+ ..+.+||..+.+-.. .+.......
T Consensus 130 g~i~vwd~~~~~~~~~--l~~h~~~---V~~v~~~~~~~~l~sgs~D-------~~i~iwd~~~~~~~~--~~~~h~~~V 195 (410)
T 1vyh_C 130 ATIKVWDYETGDFERT--LKGHTDS---VQDISFDHSGKLLASCSAD-------MTIKLWDFQGFECIR--TMHGHDHNV 195 (410)
T ss_dssp SCEEEEETTTCCCCEE--ECCCSSC---EEEEEECTTSSEEEEEETT-------SCCCEEETTSSCEEE--CCCCCSSCE
T ss_pred CeEEEEECCCCcEEEE--EeccCCc---EEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCceeE--EEcCCCCCE
Confidence 4677888877653221 1111111 012222 245677777654 346678887655322 222111112
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCcccc-ccceEE--ECCEEEEEeeecCCCCCcccceE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERD-ECKAVF--HCGKLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~-~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v 236 (289)
.+++..-++..++.|+.+. .+..+|..++.-... +. .+. ....+. -++++++.|+.++ .|
T Consensus 196 ~~v~~~p~~~~l~s~s~D~------~i~~wd~~~~~~~~~--~~-~h~~~v~~~~~~~~g~~l~s~s~D~--------~v 258 (410)
T 1vyh_C 196 SSVSIMPNGDHIVSASRDK------TIKMWEVQTGYCVKT--FT-GHREWVRMVRPNQDGTLIASCSNDQ--------TV 258 (410)
T ss_dssp EEEEECSSSSEEEEEETTS------EEEEEETTTCCEEEE--EE-CCSSCEEEEEECTTSSEEEEEETTS--------CE
T ss_pred EEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEE--Ee-CCCccEEEEEECCCCCEEEEEcCCC--------eE
Confidence 2333323666777776543 488899887643211 11 111 111111 2567777777653 57
Q ss_pred EEEECCCCce
Q 048803 237 EAFDAAAQQW 246 (289)
Q Consensus 237 ~~yd~~~~~W 246 (289)
.+||..+.+.
T Consensus 259 ~vwd~~~~~~ 268 (410)
T 1vyh_C 259 RVWVVATKEC 268 (410)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCce
Confidence 8888877654
No 114
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.95 E-value=0.93 Score=36.80 Aligned_cols=148 Identities=14% Similarity=0.228 Sum_probs=68.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCC-CCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCC-----eEEeCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGF-PDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISA-----TWRRGADMP 153 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~-----~W~~~~~~~ 153 (289)
..+.+||..++....+..+... .... . .+++. -++.+++.|+.+ ..+.+||..+. .++.+..+.
T Consensus 34 ~~i~lw~~~~~~~~~~~~~~~~~h~~~-v-~~v~~sp~~~~las~s~D-------~~v~iw~~~~~~~~~~~~~~~~~~~ 104 (330)
T 2hes_X 34 RKIKLVSVKYDDFTLIDVLDETAHKKA-I-RSVAWRPHTSLLAAGSFD-------STVSIWAKEESADRTFEMDLLAIIE 104 (330)
T ss_dssp SCEEEEECSSSCCEEEEEECTTCCCSC-E-EEEEECTTSSEEEEEETT-------SCEEEEEC-------CCCEEEEEEC
T ss_pred CEEEEEEecCCCeEEEEEEecCCccCC-E-EEEEECCCCCEEEEEeCC-------CcEEEEEcccCcCccccceeEEEEc
Confidence 4677888877654333222111 1111 0 12222 245666676643 34667776432 122222121
Q ss_pred CCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC--CceEeCCCCCccccccceEEE--CCEEEEEeeecCCCC
Q 048803 154 GGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR--DEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQ 229 (289)
Q Consensus 154 ~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~ 229 (289)
.......+++..-++...+.|+.+. .+..+|..+ ..++.+..+.........+.+ ++++++.|+.++
T Consensus 105 ~h~~~V~~v~~sp~g~~las~s~D~------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~--- 175 (330)
T 2hes_X 105 GHENEVKGVAWSNDGYYLATCSRDK------SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD--- 175 (330)
T ss_dssp ----CEEEEEECTTSCEEEEEETTS------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS---
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCC------EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC---
Confidence 1111122233323677777776554 378888743 234433222211111112222 567777777653
Q ss_pred CcccceEEEEECCCCceeeccc
Q 048803 230 GRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 230 ~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
.|..||..++.|..+..
T Consensus 176 -----~i~iW~~~~~~~~~~~~ 192 (330)
T 2hes_X 176 -----TVRIWKDYDDDWECVAV 192 (330)
T ss_dssp -----CEEEEEEETTEEEEEEE
T ss_pred -----eEEEEECCCCCeeEEEE
Confidence 57888887777766554
No 115
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=93.94 E-value=0.92 Score=36.63 Aligned_cols=122 Identities=12% Similarity=0.032 Sum_probs=66.7
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
-+++||+.+.. ...+++||+.+++.+.+.... .....+.+..-++++|+....... ....+..||++++
T Consensus 54 ~~g~l~~~~~~-------~~~i~~~d~~~~~~~~~~~~~--~~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 54 RQGQLFLLDVF-------EGNIFKINPETKEIKRPFVSH--KANPAAIKIHKDGRLFVCYLGDFK--STGGIFAATENGD 122 (333)
T ss_dssp TTSCEEEEETT-------TCEEEEECTTTCCEEEEEECS--SSSEEEEEECTTSCEEEEECTTSS--SCCEEEEECTTSC
T ss_pred CCCCEEEEECC-------CCEEEEEeCCCCcEEEEeeCC--CCCcceEEECCCCcEEEEeCCCCC--CCceEEEEeCCCC
Confidence 35678887652 346899999988876543211 112334444347888887543211 1236899999887
Q ss_pred ceEe-CCCCCccccccceEE-ECCEEEEEeeecCCCCCcccceEEEEECCCCceeec
Q 048803 195 EWAS-LPDMSRERDECKAVF-HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPV 249 (289)
Q Consensus 195 ~W~~-~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~ 249 (289)
.... +............+. -+|++|+....... ......++.||+++++...+
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~--~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS--TNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT--TBCCEEEEEECTTSCCEEEE
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccc--cCCCceEEEEeCCCCEEEEe
Confidence 6552 222111111111222 26788886532111 01124689999887776554
No 116
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.84 E-value=2.2 Score=34.58 Aligned_cols=144 Identities=13% Similarity=0.029 Sum_probs=75.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCC--eEEeCCCC-----
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISA--TWRRGADM----- 152 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~----- 152 (289)
..+.++|+.+++...... ......+ ..++. -++.||+.... ...+.+||+... .-..+...
T Consensus 69 ~~i~~~d~~~g~~~~~~~--~~~~~~p--~gia~d~~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g~ 137 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG--KNLFYLP--HGLSIDTDGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPGS 137 (329)
T ss_dssp CCEEEECTTTCCEEEEEC--TTTCSSE--EEEEECTTSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCCC
T ss_pred CcEEEEECCCCeEEeccC--CCccCCc--eEEEECCCCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCCC
Confidence 468999998777543211 1111111 12333 35679987642 356888998654 22222110
Q ss_pred -CCCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCC-------Ccccc-ccceEEE-C-CEEEE
Q 048803 153 -PGGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDM-------SRERD-ECKAVFH-C-GKLLV 220 (289)
Q Consensus 153 -~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-------~~~~~-~~~~~~~-~-~~l~~ 220 (289)
........+.++.- ++.||+..++.+ ..+.+||+....-..+... +.... ..++++- + ++||+
T Consensus 138 ~~~~~~~P~~ia~~~~~g~lyv~d~~~~-----~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v 212 (329)
T 3fvz_A 138 DQNHFCQPTDVAVEPSTGAVFVSDGYCN-----SRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCV 212 (329)
T ss_dssp STTCCSSEEEEEECTTTCCEEEEECSSC-----CEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEE
T ss_pred CccccCCCcEEEEeCCCCeEEEEeCCCC-----CeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEE
Confidence 00111234556544 689999975322 3588898654433322210 11111 1233332 4 89999
Q ss_pred EeeecCCCCCcccceEEEEECCCCceee
Q 048803 221 IGGYSTNAQGRFERHAEAFDAAAQQWGP 248 (289)
Q Consensus 221 ~gG~~~~~~~~~~~~v~~yd~~~~~W~~ 248 (289)
....+ +.|.+||+++++...
T Consensus 213 ~d~~~--------~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 213 ADREN--------GRIQCFKTDTKEFVR 232 (329)
T ss_dssp EETTT--------TEEEEEETTTCCEEE
T ss_pred EECCC--------CEEEEEECCCCcEEE
Confidence 86432 379999998666543
No 117
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=93.82 E-value=2.3 Score=34.73 Aligned_cols=102 Identities=14% Similarity=0.068 Sum_probs=49.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
..++.+|+.+++.+.+... ...... +.+..--+..||+.+..... ...-.+|.++..+++.+.+...+.......
T Consensus 29 i~~~~~d~~~g~~~~~~~~-~~~~p~--~l~~spdg~~l~~~~~~~~~--~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 29 IYTFRFNEETGESLPLSDA-EVANPS--YLIPSADGKFVYSVNEFSKD--QAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp EEEEEEETTTCCEEEEEEE-ECSCCC--SEEECTTSSEEEEEECCSST--TCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred EEEEEEeCCCCCEEEeecc-cCCCCc--eEEECCCCCEEEEEEccCCC--CCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 4567778888888766543 111111 11111124457776553211 112234555666677766644331122223
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
..+. -++.+|+....+ ..+..|++.++
T Consensus 104 ~~~~-dg~~l~~~~~~~------~~v~~~~~~~~ 130 (361)
T 3scy_A 104 YLTT-NGKNIVTANYSG------GSITVFPIGQD 130 (361)
T ss_dssp EEEE-CSSEEEEEETTT------TEEEEEEBCTT
T ss_pred EEEE-CCCEEEEEECCC------CEEEEEEeCCC
Confidence 3333 345577664322 24788887643
No 118
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.80 E-value=0.33 Score=39.60 Aligned_cols=103 Identities=10% Similarity=0.041 Sum_probs=54.1
Q ss_pred cceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccc-eE
Q 048803 134 SSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECK-AV 212 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~ 212 (289)
-.++.+|..+++++.+..... .......+..-++++|+.+...+ ...+..||+.+++++.+........... .+
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~-~~~p~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAA-TQNPTYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEE-CSCCCCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred EEEEEEcCCCCeEEEeeeeec-cCCcceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 447777888888766432221 11122344434788887754211 2358999998888776654322222222 22
Q ss_pred E-ECCE-EEEEeeecCCCCCcccceEEEEECC-CCceeec
Q 048803 213 F-HCGK-LLVIGGYSTNAQGRFERHAEAFDAA-AQQWGPV 249 (289)
Q Consensus 213 ~-~~~~-l~~~gG~~~~~~~~~~~~v~~yd~~-~~~W~~~ 249 (289)
. -+++ ||+.+ ... +.+.+||.. +++...+
T Consensus 93 ~spdg~~l~~~~-~~~-------~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 93 VDEARQLVYSAN-YHK-------GTAEVMKIAADGALTLT 124 (347)
T ss_dssp EETTTTEEEEEE-TTT-------TEEEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEEe-CCC-------CEEEEEEeCCCCCeeec
Confidence 2 3555 55554 221 357888874 3344433
No 119
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.77 E-value=0.58 Score=38.63 Aligned_cols=166 Identities=7% Similarity=0.010 Sum_probs=78.3
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||..+++-... +...... -..++.. ++.+++.|+.+ ..+.+||..+.+-............
T Consensus 161 g~v~iwd~~~~~~~~~--~~~h~~~---v~~v~~s~~~~~~~~s~~~d-------g~v~~wd~~~~~~~~~~~~~~~~~~ 228 (357)
T 4g56_B 161 FSVKVWDLSQKAVLKS--YNAHSSE---VNCVAACPGKDTIFLSCGED-------GRILLWDTRKPKPATRIDFCASDTI 228 (357)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSC---EEEEEECTTCSSCEEEEETT-------SCEEECCTTSSSCBCBCCCTTCCSC
T ss_pred CeEEEEECCCCcEEEE--EcCCCCC---EEEEEEccCCCceeeeeccC-------CceEEEECCCCceeeeeeecccccc
Confidence 4677889887754322 1111111 1122222 23466666643 3477888877653322222211111
Q ss_pred ceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CC-EEEEEeeecCCCCCcccc
Q 048803 159 LFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CG-KLLVIGGYSTNAQGRFER 234 (289)
Q Consensus 159 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~l~~~gG~~~~~~~~~~~ 234 (289)
..+++..- ++.+++.|+.+. .+..||+.+.+= +..+.........+.+ ++ ++++.|+.++
T Consensus 229 v~~v~~sp~~~~~la~g~~d~------~i~~wd~~~~~~--~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~-------- 292 (357)
T 4g56_B 229 PTSVTWHPEKDDTFACGDETG------NVSLVNIKNPDS--AQTSAVHSQNITGLAYSYHSSPFLASISEDC-------- 292 (357)
T ss_dssp EEEEEECTTSTTEEEEEESSS------CEEEEESSCGGG--CEEECCCSSCEEEEEECSSSSCCEEEEETTS--------
T ss_pred ccchhhhhcccceEEEeeccc------ceeEEECCCCcE--eEEEeccceeEEEEEEcCCCCCEEEEEeCCC--------
Confidence 12222211 456777776543 388889876531 1111111111112222 34 5666666543
Q ss_pred eEEEEECCCCceeecccccccCCCCCCceee-e-eCCeEEEEeCcee
Q 048803 235 HAEAFDAAAQQWGPVEEDFMETATCPRSCAG-V-DSNDLYMCREGDV 279 (289)
Q Consensus 235 ~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~-~~~~ly~~GG~~~ 279 (289)
.|.+||..+++-..... .. ....+++ . .++.+++.||.|+
T Consensus 293 ~i~iwd~~~~~~~~~~~----H~-~~V~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 293 TVAVLDADFSEVFRDLS----HR-DFVTGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp CEEEECTTSCEEEEECC----CS-SCEEEEEECSSSTTEEEEEETTS
T ss_pred EEEEEECCCCcEeEECC----CC-CCEEEEEEeCCCCCEEEEEcCCC
Confidence 58899988775433211 11 1112333 2 3677888887654
No 120
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.70 E-value=3.4 Score=36.30 Aligned_cols=135 Identities=12% Similarity=0.061 Sum_probs=71.5
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
++.+++|+.. ...+.+||..+++... ..+.........++..-++++.+.|+.+. .+..||..+.+-
T Consensus 456 ~~~l~~~~~~------d~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg------~i~iw~~~~~~~ 522 (615)
T 1pgu_A 456 QNYVAVGLEE------GNTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVMG------KILLYDLQSREV 522 (615)
T ss_dssp SSEEEEEETT------TSCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEE
T ss_pred CCEEEEeecC------CCeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCCC------eEEEeeCCCCcc
Confidence 5566666530 3458899998877642 22221111223333333777778776543 388999987643
Q ss_pred EeCCCCCc-cccccceEEE------------CCEEEEEeeecCCCCCcccceEEEEECCCCc--eeecccccccCCCCCC
Q 048803 197 ASLPDMSR-ERDECKAVFH------------CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPVEEDFMETATCPR 261 (289)
Q Consensus 197 ~~~~~~~~-~~~~~~~~~~------------~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~ 261 (289)
.. .+.. .......+.+ ++++++.|+.++ .|..||..+.. ...+.. ......
T Consensus 523 ~~--~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg--------~i~iw~~~~~~~~~~~~~~----h~~~v~ 588 (615)
T 1pgu_A 523 KT--SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT--------NIFIYSVKRPMKIIKALNA----HKDGVN 588 (615)
T ss_dssp EE--CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS--------CEEEEESSCTTCCEEETTS----STTCEE
T ss_pred ee--EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC--------cEEEEECCCCceechhhhc----CccceE
Confidence 32 2221 1111222222 678888887653 58999998752 222221 111111
Q ss_pred ceeeeeCCeEEEEeCcee
Q 048803 262 SCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 262 ~~~~~~~~~ly~~GG~~~ 279 (289)
......+++ ++.+|.|+
T Consensus 589 ~l~~s~~~~-l~s~~~d~ 605 (615)
T 1pgu_A 589 NLLWETPST-LVSSGADA 605 (615)
T ss_dssp EEEEEETTE-EEEEETTS
T ss_pred EEEEcCCCC-eEEecCCc
Confidence 123456888 66776554
No 121
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.69 E-value=1.7 Score=33.78 Aligned_cols=146 Identities=6% Similarity=-0.044 Sum_probs=75.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccC-CeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIIS-ATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~~~~~ 159 (289)
..++++|..+++...+....... ......-+++.+++++ ...++++|..+ ++...+..... ....
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~v-----~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~-~~~~ 87 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPELF-----EAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFA-TICN 87 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSCC-----EEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTC-CCBC
T ss_pred eeEEEEeCCCCceeeeccCCcce-----EeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEeccccc-cccc
Confidence 68899999988766544322111 1112223455555543 24689999988 77666543331 1112
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECCE-EEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCGK-LLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~-l~~~gG~~~~~~~~~~~~v~ 237 (289)
...+..-+++.+++++.... ....++.+|..+..-..+..... ....+. -+++ |++.++.+.. ..++
T Consensus 88 ~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~------~~l~ 156 (297)
T 2ojh_A 88 NDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQV------FDIY 156 (297)
T ss_dssp SCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETTE------EEEE
T ss_pred cceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCCc------eEEE
Confidence 22333236665555543221 23468888888776555433221 111122 2454 5545544321 2567
Q ss_pred EEECCCCceeeccc
Q 048803 238 AFDAAAQQWGPVEE 251 (289)
Q Consensus 238 ~yd~~~~~W~~~~~ 251 (289)
.+|..+.+...+..
T Consensus 157 ~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 157 SMDIDSGVETRLTH 170 (297)
T ss_dssp EEETTTCCEEECCC
T ss_pred EEECCCCcceEccc
Confidence 77777777665543
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=93.52 E-value=1.1 Score=37.62 Aligned_cols=98 Identities=11% Similarity=0.043 Sum_probs=57.2
Q ss_pred cceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCc--ccc-ccc
Q 048803 134 SSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSR--ERD-ECK 210 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~-~~~ 210 (289)
..++.+|+.+++++.+..++... ...+.+..-++.+++.++.+. .+..+|+.+++-....+... .+. ...
T Consensus 101 ~~l~~~d~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~------~i~~~d~~~g~~~~~~~~~~~~~~~~~v~ 173 (433)
T 3bws_A 101 EKLIALDKEGITHRFISRFKTGF-QPKSVRFIDNTRLAIPLLEDE------GMDVLDINSGQTVRLSPPEKYKKKLGFVE 173 (433)
T ss_dssp TCEEECCBTTCSEEEEEEEECSS-CBCCCEESSSSEEEEEBTTSS------SEEEEETTTCCEEEECCCHHHHTTCCEEE
T ss_pred eEEEEECCCCCcceEEEEEcCCC-CceEEEEeCCCeEEEEeCCCC------eEEEEECCCCeEeeecCcccccccCCcee
Confidence 46888888777655544333111 112333323678888876443 48999999887664433321 111 112
Q ss_pred eEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 211 AVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 211 ~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
.+.+ ++++++.++.+ ..+.+||..+.+-
T Consensus 174 ~~~~~~~~~~~~s~~~d--------~~v~~~d~~~~~~ 203 (433)
T 3bws_A 174 TISIPEHNELWVSQMQA--------NAVHVFDLKTLAY 203 (433)
T ss_dssp EEEEGGGTEEEEEEGGG--------TEEEEEETTTCCE
T ss_pred EEEEcCCCEEEEEECCC--------CEEEEEECCCceE
Confidence 2233 78888887654 3689999987653
No 123
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.51 E-value=2.6 Score=34.32 Aligned_cols=166 Identities=12% Similarity=0.178 Sum_probs=80.3
Q ss_pred CCeEeCCCCC-CCCCCCCceeEEE-EeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC
Q 048803 91 GEWSELPPIP-GFPDGLPLFCQLS-AVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR 168 (289)
Q Consensus 91 ~~W~~~~~~~-~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~ 168 (289)
.+|+.+.... .+.. ...++ .-++.+|++|.. ..+++-+-.-.+|+.+.... ....++.+..-++
T Consensus 109 ~tW~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~--------g~v~~S~DgG~tW~~~~~~~--~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 109 QSWSQIPLDPKLPGS----PRLIKALGNGSAEMITNV--------GAIYRTKDSGKNWQALVQEA--IGVMRNLNRSPSG 174 (327)
T ss_dssp SSCEECCCCTTCSSC----EEEEEEEETTEEEEEETT--------CCEEEESSTTSSEEEEECSC--CCCEEEEEECTTS
T ss_pred CCceECccccCCCCC----eEEEEEECCCCEEEEeCC--------ccEEEEcCCCCCCEEeecCC--CcceEEEEEcCCC
Confidence 5788876431 1111 11333 346788887641 12443332345798875432 2223444443366
Q ss_pred EEEEEcCCCCCCcccCceEEE-EcCCCceEeCCCCCccccccceEE-ECCEEEEEeeecCCCCCcccceEEEEECC-CCc
Q 048803 169 TVYVAGGHDEDKNALKSAMAY-DVARDEWASLPDMSRERDECKAVF-HCGKLLVIGGYSTNAQGRFERHAEAFDAA-AQQ 245 (289)
Q Consensus 169 ~iyv~GG~~~~~~~~~~~~~y-d~~~~~W~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~~yd~~-~~~ 245 (289)
.++++|... .++.- |..-.+|+.+.... +.....++. -++++|+.+.. ..+...+.+ ..+
T Consensus 175 ~~~~~g~~G-------~~~~S~d~gG~tW~~~~~~~-~~~~~~~~~~~~g~~~~~~~~---------G~~~~s~~D~G~t 237 (327)
T 2xbg_A 175 EYVAVSSRG-------SFYSTWEPGQTAWEPHNRTT-SRRLHNMGFTPDGRLWMIVNG---------GKIAFSDPDNSEN 237 (327)
T ss_dssp CEEEEETTS-------SEEEEECTTCSSCEEEECCS-SSCEEEEEECTTSCEEEEETT---------TEEEEEETTEEEE
T ss_pred cEEEEECCC-------cEEEEeCCCCCceeECCCCC-CCccceeEECCCCCEEEEeCC---------ceEEEecCCCCCe
Confidence 777765321 13333 22256898874332 222222332 36788877631 134444333 568
Q ss_pred eeecccccccCCCCCCceee-eeCCeEEEEeCceeecc--c-CCccc
Q 048803 246 WGPVEEDFMETATCPRSCAG-VDSNDLYMCREGDVMAL--R-CNTWQ 288 (289)
Q Consensus 246 W~~~~~~~~~~~~~~~~~~~-~~~~~ly~~GG~~~~~~--~-~~~w~ 288 (289)
|+.+.....+. ......++ .-++.+|++|+...+.. + ..+|+
T Consensus 238 W~~~~~~~~~~-~~~~~~v~~~~~~~~~~~g~~g~i~~S~DgG~tW~ 283 (327)
T 2xbg_A 238 WGELLSPLRRN-SVGFLDLAYRTPNEVWLAGGAGALLCSQDGGQTWQ 283 (327)
T ss_dssp ECCCBCTTSSC-CSCEEEEEESSSSCEEEEESTTCEEEESSTTSSCE
T ss_pred eEeccCCcccC-CcceEEEEecCCCEEEEEeCCCeEEEeCCCCcccE
Confidence 99876421111 11112232 23678999887543322 2 25775
No 124
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.51 E-value=0.36 Score=39.08 Aligned_cols=144 Identities=13% Similarity=0.097 Sum_probs=68.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCC---
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGG--- 155 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~--- 155 (289)
..++++|+.+++....-+.+...... .++.. +..+|+.+.. ...+.+||+.+++-...-..+..
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~~~~~~----~~~~s~dg~~~~v~~~~-------~~~i~~~d~~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPDKFGPG----TAMMAPDNRTAYVLNNH-------YGDIYGIDLDTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCSSC----EEEECTTSSEEEEEETT-------TTEEEEEETTTTEEEEEEESCCSTTE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCc----eeEECCCCCEEEEEeCC-------CCcEEEEeCCCCcEEEEEEccccccc
Confidence 57889999988754332233210111 23322 3457777532 35689999988875432222211
Q ss_pred -CccceeEEEecCC-EEEEEcCC-----CCCCcccCceEEEEcCCCceEe-CCCCCccccccceE-EECCEEEEEeeecC
Q 048803 156 -RRMLFGCASDGDR-TVYVAGGH-----DEDKNALKSAMAYDVARDEWAS-LPDMSRERDECKAV-FHCGKLLVIGGYST 226 (289)
Q Consensus 156 -~~~~~~~~~~~~~-~iyv~GG~-----~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~-~~~~~l~~~gG~~~ 226 (289)
.....+.+..-++ .+|+.+.. .........+..||+++++-.. +.....+..-.+.+ .-++++|+.+
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~---- 165 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG---- 165 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES----
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEcc----
Confidence 0111233433355 45555421 0000012468999988743211 11111122112222 2367777632
Q ss_pred CCCCcccceEEEEECCCCce
Q 048803 227 NAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 227 ~~~~~~~~~v~~yd~~~~~W 246 (289)
..+.++|+.+++-
T Consensus 166 -------~~i~~~d~~~~~~ 178 (349)
T 1jmx_B 166 -------PDIYKMDVKTGKY 178 (349)
T ss_dssp -------SSEEEECTTTCCE
T ss_pred -------CcEEEEeCCCCce
Confidence 1378888877653
No 125
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.51 E-value=0.93 Score=36.78 Aligned_cols=64 Identities=16% Similarity=0.157 Sum_probs=34.6
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCC-ceE-eCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECC
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARD-EWA-SLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAA 242 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~-~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~ 242 (289)
++..+++|+.+. .+..||+.++ .-. .+... ......+.+ +++.++.++.+ ..+.+||..
T Consensus 186 ~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d--------~~i~v~d~~ 248 (369)
T 3zwl_B 186 KGKYIIAGHKDG------KISKYDVSNNYEYVDSIDLH---EKSISDMQFSPDLTYFITSSRD--------TNSFLVDVS 248 (369)
T ss_dssp GGCEEEEEETTS------EEEEEETTTTTEEEEEEECC---SSCEEEEEECTTSSEEEEEETT--------SEEEEEETT
T ss_pred CCCEEEEEcCCC------EEEEEECCCCcEeEEEEecC---CCceeEEEECCCCCEEEEecCC--------ceEEEEECC
Confidence 566666665433 4889998873 221 11111 111122222 66667776654 268899988
Q ss_pred CCcee
Q 048803 243 AQQWG 247 (289)
Q Consensus 243 ~~~W~ 247 (289)
+.+-.
T Consensus 249 ~~~~~ 253 (369)
T 3zwl_B 249 TLQVL 253 (369)
T ss_dssp TCCEE
T ss_pred CCcee
Confidence 76543
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.43 E-value=3.1 Score=35.03 Aligned_cols=146 Identities=10% Similarity=0.029 Sum_probs=79.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCE-EEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPE-LVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..++.+|..+++...+....... ...+. -+++ |++.+..+ ....++++|..+++-+.+.... ..
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~------~~~~~spdg~~l~~~s~~~-----g~~~i~~~d~~~~~~~~l~~~~---~~ 312 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNN------TEPTWFPDSQNLAFTSDQA-----GRPQVYKVNINGGAPQRITWEG---SQ 312 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCE------EEEEECTTSSEEEEEECTT-----SSCEEEEEETTSSCCEECCCSS---SE
T ss_pred ceEEEEECCCCCEEeCcCCCCcc------cceEECCCCCEEEEEECCC-----CCcEEEEEECCCCCEEEEecCC---Cc
Confidence 46889999888876665432110 12222 2344 55443222 2346889999887755543322 11
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceE-EECCEEEEEeeecCCCCCcccceEE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAV-FHCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
....+..-+++..++++..+. ...+..+|+.+++...+.... .....+ .-+|+.+++++.+.. ...++
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g---~~~i~~~d~~~~~~~~l~~~~---~~~~~~~spdg~~l~~~s~~~~-----~~~l~ 381 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGG---QQHIAKQDLATGGVQVLSSTF---LDETPSLAPNGTMVIYSSSQGM-----GSVLN 381 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSS---CEEEEEEETTTCCEEECCCSS---SCEEEEECTTSSEEEEEEEETT-----EEEEE
T ss_pred ccCeEECCCCCEEEEEECcCC---ceEEEEEECCCCCEEEecCCC---CcCCeEEcCCCCEEEEEEcCCC-----ccEEE
Confidence 222333236655444443221 246899999998877654322 111112 236776666655432 13689
Q ss_pred EEECCCCceeeccc
Q 048803 238 AFDAAAQQWGPVEE 251 (289)
Q Consensus 238 ~yd~~~~~W~~~~~ 251 (289)
.+|..++.-..+..
T Consensus 382 ~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 382 LVSTDGRFKARLPA 395 (415)
T ss_dssp EEETTSCCEEECCC
T ss_pred EEECCCCcEEEeeC
Confidence 99998877666654
No 127
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.36 E-value=1.1 Score=37.34 Aligned_cols=94 Identities=16% Similarity=0.118 Sum_probs=53.9
Q ss_pred cceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE
Q 048803 134 SSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF 213 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 213 (289)
..+.+||..+++........+ .....+++..-++.+.++|+.+. .+..||..+.+-... +.........+.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~-~~~v~~v~~s~~~~~l~~~~~dg------~i~iwd~~~~~~~~~--~~~~~~~v~~~~ 183 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDE-STYVASVKWSHDGSFLSVGLGNG------LVDIYDVESQTKLRT--MAGHQARVGCLS 183 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCT-TCCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEE--ECCCSSCEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCC-CCCEEEEEECCCCCEEEEECCCC------eEEEEECcCCeEEEE--ecCCCCceEEEE
Confidence 458899999888655544321 11123334333677777766543 488999887753321 111111223334
Q ss_pred ECCEEEEEeeecCCCCCcccceEEEEECCCC
Q 048803 214 HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQ 244 (289)
Q Consensus 214 ~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~ 244 (289)
.++++++.|+.++ .+..||....
T Consensus 184 ~~~~~l~~~~~dg--------~i~i~d~~~~ 206 (401)
T 4aez_A 184 WNRHVLSSGSRSG--------AIHHHDVRIA 206 (401)
T ss_dssp EETTEEEEEETTS--------EEEEEETTSS
T ss_pred ECCCEEEEEcCCC--------CEEEEecccC
Confidence 5677777776643 6889998743
No 128
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=93.34 E-value=1.1 Score=37.80 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=55.3
Q ss_pred cceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE
Q 048803 134 SSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF 213 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 213 (289)
..+.++|..+++-..+-.+......-.+++..-++...+.|+.+. .+..+|.++++-... +...........
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg------~v~iWd~~~~~~~~~--~~~h~~~v~~~s 196 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQKRLRN--MTSHSARVGSLS 196 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEE--ECCCSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC------eEEEEEcCCCcEEEE--EeCCCCceEEEe
Confidence 458899999988765544431122223344333778888877654 388999987743211 111111223344
Q ss_pred ECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 214 HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 214 ~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
.++++++.|+.+. .+..+|.....
T Consensus 197 ~~~~~l~sgs~d~--------~i~~~d~~~~~ 220 (420)
T 4gga_A 197 WNSYILSSGSRSG--------HIHHHDVRVAE 220 (420)
T ss_dssp EETTEEEEEETTS--------EEEEEETTSSS
T ss_pred eCCCEEEEEeCCC--------ceeEeeecccc
Confidence 5777777776643 56777776543
No 129
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.20 E-value=4.5 Score=36.19 Aligned_cols=108 Identities=19% Similarity=0.205 Sum_probs=56.4
Q ss_pred eeEEEEEC-CCCC--eEeCCCCCCC-----CCCCCceeEEEE--eCCE----EEEEeCcCCCCcccccceEEEEccCCe-
Q 048803 81 YRITVLEL-GSGE--WSELPPIPGF-----PDGLPLFCQLSA--VGPE----LVVIGGLDLTTWEASSSVFVFNIISAT- 145 (289)
Q Consensus 81 ~~~~~~d~-~~~~--W~~~~~~~~~-----~~~~~~~~~~~~--~~~~----lyv~GG~~~~~~~~~~~~~~yd~~t~~- 145 (289)
..++++|. .+++ |+.-...+.. .+.. .....+. .+++ ||+... ...++.+|..|++
T Consensus 73 ~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~-~~~g~av~p~~g~~~~rV~v~t~--------dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 73 NNTFALGLDDPGTILWQDKPKQNPAARAVACCDL-VNRGLAYWPGDGKTPALILKTQL--------DGNVAALNAETGET 143 (599)
T ss_dssp TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCS-CCCCCEEECCCSSSCCEEEEECT--------TSEEEEEETTTCCE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCccccccccccc-cccceEEEecCCcceeEEEEEcC--------CCEEEEEECCCCCE
Confidence 56889999 7766 7754433211 1100 0012334 4666 877522 3468889998876
Q ss_pred -EEeC-CCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc--eEeC
Q 048803 146 -WRRG-ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE--WASL 199 (289)
Q Consensus 146 -W~~~-~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~ 199 (289)
|+.- .... ......+..++.++.||+..+..+ ......+..||.+|++ |+.-
T Consensus 144 ~W~~~~~~~~-~~~~~~ssP~v~~g~V~vg~~g~e-~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 144 VWKVENSDIK-VGSTLTIAPYVVKDKVIIGSSGAE-LGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEECCCGG-GTCBCCSCCEEETTEEEECCBCGG-GTCCCEEEEEETTTCCEEEEEE
T ss_pred EEeecCCCCC-ccceeecCCEEECCEEEEEecccc-cCCCCeEEEEECCCCcEEEEEc
Confidence 8743 2211 001111222224888876533211 1123468999999874 8743
No 130
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.17 E-value=2.6 Score=33.41 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=56.3
Q ss_pred eeEEEEECCCCCeEeCCCCCC--CCCCCCceeEEEE-eC-CEEEEEeCcCCCCcccccceEEEEccCCeEEeC-CCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPG--FPDGLPLFCQLSA-VG-PELVVIGGLDLTTWEASSSVFVFNIISATWRRG-ADMPGG 155 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~--~~~~~~~~~~~~~-~~-~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~ 155 (289)
..+.+||+.++++..+.. +. ..... -..++. -+ ++||+... ...+.+||+. ++.+.+ ......
T Consensus 46 ~~i~~~d~~~g~~~~~~~-~~~~~~~~~--~~~i~~~~~~g~l~v~~~--------~~~l~~~d~~-g~~~~~~~~~~~~ 113 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICK-PEVNGYGGI--PAGCQCDRDANQLFVADM--------RLGLLVVQTD-GTFEEIAKKDSEG 113 (314)
T ss_dssp CEEEEECTTTCCEEEEEC-CEETTEECC--EEEEEECSSSSEEEEEET--------TTEEEEEETT-SCEEECCSBCTTS
T ss_pred CEEEEEeCCCCcEEEEEe-cccCCCCCC--CceEEEecCCCcEEEEEC--------CCCEEEEeCC-CCEEEEEeccCCC
Confidence 468899998888765432 10 00011 112333 24 68888753 2358899998 777665 322111
Q ss_pred --CccceeEEEecCCEEEEEcCCCC---------CCcccCceEEEEcCCCceEe
Q 048803 156 --RRMLFGCASDGDRTVYVAGGHDE---------DKNALKSAMAYDVARDEWAS 198 (289)
Q Consensus 156 --~~~~~~~~~~~~~~iyv~GG~~~---------~~~~~~~~~~yd~~~~~W~~ 198 (289)
.......+...++++|+...... .......++.||+. ++...
T Consensus 114 ~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 114 RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 11223455444788988754321 01112458888876 55543
No 131
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.06 E-value=1.9 Score=34.36 Aligned_cols=176 Identities=11% Similarity=0.024 Sum_probs=84.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEE-EeCCEEEEEeCcCCC----CcccccceEEEEccCCeEEeCC-CCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLS-AVGPELVVIGGLDLT----TWEASSSVFVFNIISATWRRGA-DMPG 154 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~----~~~~~~~~~~yd~~t~~W~~~~-~~~~ 154 (289)
..+++||+.+++.+.+...+........ ..++ .-++++|+..-.... .......++++|+.. +...+. .+.
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~-~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~- 149 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRF-NDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVD- 149 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEE-EEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEES-
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCC-CCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccc-
Confidence 4688999998888766543221111101 1222 225677774311110 001245688888753 333321 111
Q ss_pred CCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEc--CCCceEe---CCCCCccccc-cceEE-ECCEEEEEeeecC
Q 048803 155 GRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDV--ARDEWAS---LPDMSRERDE-CKAVF-HCGKLLVIGGYST 226 (289)
Q Consensus 155 ~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~--~~~~W~~---~~~~~~~~~~-~~~~~-~~~~l~~~gG~~~ 226 (289)
...+.+..-++ .+|+.... ...+..||. +++.... +..++..... -++++ -+|+||+.....
T Consensus 150 ---~pngi~~spdg~~lyv~~~~------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~- 219 (297)
T 3g4e_A 150 ---ISNGLDWSLDHKIFYYIDSL------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG- 219 (297)
T ss_dssp ---BEEEEEECTTSCEEEEEEGG------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT-
T ss_pred ---cccceEEcCCCCEEEEecCC------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC-
Confidence 12344443344 58887432 235788875 4554321 1122211111 12233 367888875321
Q ss_pred CCCCcccceEEEEECCCCceeecccccccCCCCCCceeee--eCCeEEEEeCcee
Q 048803 227 NAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV--DSNDLYMCREGDV 279 (289)
Q Consensus 227 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~ly~~GG~~~ 279 (289)
+.|.+||+++++....-. .+. ..+..+++. -.+.|||......
T Consensus 220 -------~~v~~~d~~tG~~~~~i~--~p~-~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 220 -------GRVIRLDPVTGKRLQTVK--LPV-DKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp -------TEEEEECTTTCCEEEEEE--CSS-SBEEEEEEESGGGCEEEEEEBCTT
T ss_pred -------CEEEEEcCCCceEEEEEE--CCC-CCceEEEEeCCCCCEEEEEcCCcC
Confidence 359999998776543322 121 223222222 1257999876443
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.99 E-value=0.54 Score=41.52 Aligned_cols=92 Identities=13% Similarity=-0.006 Sum_probs=46.7
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE--eCCEEEEEeCcCCCCcccccceEEEEc--cCCeEEeCCCCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA--VGPELVVIGGLDLTTWEASSSVFVFNI--ISATWRRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~yd~--~t~~W~~~~~~~~~~ 156 (289)
..+.++|..+++-...-+... .. +.++. .+..||+.+. ...+.+||. .+.+-. ..++. .
T Consensus 159 ~~V~v~D~~t~~~~~~i~~g~--~~----~~v~~spdg~~l~v~~~--------d~~V~v~D~~~~t~~~~--~~i~~-g 221 (543)
T 1nir_A 159 GQIALVDGDSKKIVKVIDTGY--AV----HISRMSASGRYLLVIGR--------DARIDMIDLWAKEPTKV--AEIKI-G 221 (543)
T ss_dssp TEEEEEETTTCCEEEEEECST--TE----EEEEECTTSCEEEEEET--------TSEEEEEETTSSSCEEE--EEEEC-C
T ss_pred CeEEEEECCCceEEEEEecCc--cc----ceEEECCCCCEEEEECC--------CCeEEEEECcCCCCcEE--EEEec-C
Confidence 478889998876432211111 11 12222 2346776643 266889999 666532 22221 1
Q ss_pred ccceeEEEec----CC-EEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 157 RMLFGCASDG----DR-TVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 157 ~~~~~~~~~~----~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
....+.+..- ++ .+|+....+ ..+..+|..+.+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~------~~v~v~D~~t~~ 259 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWP------PQFAIMDGETLE 259 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEES------SEEEEEETTTCC
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccC------CeEEEEeccccc
Confidence 1223444433 44 455543222 357888988764
No 133
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.95 E-value=0.79 Score=37.90 Aligned_cols=103 Identities=10% Similarity=0.139 Sum_probs=52.4
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEec---CCEEEEEcCCCCCCcccCceEEEEcC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDG---DRTVYVAGGHDEDKNALKSAMAYDVA 192 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~ 192 (289)
++.+++.|+.+ ..+.+||..+.+-...-.... . ........ ++.+.+.|+.+. .+..||+.
T Consensus 111 ~~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~------~v~~~d~~ 174 (408)
T 4a11_B 111 DTGMFTSSSFD-------KTLKVWDTNTLQTADVFNFEE-T--VYSHHMSPVSTKHCLVAVGTRGP------KVQLCDLK 174 (408)
T ss_dssp CTTCEEEEETT-------SEEEEEETTTTEEEEEEECSS-C--EEEEEECSSCSSCCEEEEEESSS------SEEEEESS
T ss_pred CCcEEEEEeCC-------CeEEEeeCCCCccceeccCCC-c--eeeeEeecCCCCCcEEEEEcCCC------eEEEEeCC
Confidence 44566666533 458889988877544333331 1 12222211 334666665443 48889988
Q ss_pred CCceEeCCCCCccccccceEEE--CCE-EEEEeeecCCCCCcccceEEEEECCCC
Q 048803 193 RDEWASLPDMSRERDECKAVFH--CGK-LLVIGGYSTNAQGRFERHAEAFDAAAQ 244 (289)
Q Consensus 193 ~~~W~~~~~~~~~~~~~~~~~~--~~~-l~~~gG~~~~~~~~~~~~v~~yd~~~~ 244 (289)
+..-... +.........+.+ +++ +++.|+.++ .+..||..+.
T Consensus 175 ~~~~~~~--~~~~~~~v~~~~~~~~~~~ll~~~~~dg--------~i~i~d~~~~ 219 (408)
T 4a11_B 175 SGSCSHI--LQGHRQEILAVSWSPRYDYILATASADS--------RVKLWDVRRA 219 (408)
T ss_dssp SSCCCEE--ECCCCSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTCS
T ss_pred Ccceeee--ecCCCCcEEEEEECCCCCcEEEEEcCCC--------cEEEEECCCC
Confidence 6532111 1111111112222 333 677776543 5888998665
No 134
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=92.94 E-value=3 Score=38.01 Aligned_cols=120 Identities=19% Similarity=0.206 Sum_probs=70.3
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCCC-------ccceeEEEecCCEEEEEcCCCCCCc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGGR-------RMLFGCASDGDRTVYVAGGHDEDKN 181 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~-------~~~~~~~~~~~~~iyv~GG~~~~~~ 181 (289)
+-++.++.||+... ...++.+|..|++ |+.-...+... ....+.++ .+++||+... +
T Consensus 65 ~P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~v~v~~~-d---- 130 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP--------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV-WKGKVYVGVL-D---- 130 (689)
T ss_dssp CCEEETTEEEEECG--------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECT-T----
T ss_pred cCEEECCEEEEEcC--------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE-ECCEEEEEcc-C----
Confidence 34568999998743 3568889998876 88654332100 00112233 4888888642 1
Q ss_pred ccCceEEEEcCCCc--eEeCCC--CCc-cccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc--eeec
Q 048803 182 ALKSAMAYDVARDE--WASLPD--MSR-ERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPV 249 (289)
Q Consensus 182 ~~~~~~~yd~~~~~--W~~~~~--~~~-~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 249 (289)
..+..+|.+|++ |+.-.. ... .....+.++.+++||+..+.... .....+.+||..+++ |+.-
T Consensus 131 --g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 --GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF---GVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp --SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEE
T ss_pred --CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc---CCCCEEEEEECCCCcEEEEec
Confidence 358999998874 875432 111 11123446679998874332110 022479999998875 8753
No 135
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=92.86 E-value=2.1 Score=38.88 Aligned_cols=120 Identities=18% Similarity=0.173 Sum_probs=71.0
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCCC-------ccceeEEEecCCEEEEEcCCCCCCc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGGR-------RMLFGCASDGDRTVYVAGGHDEDKN 181 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~-------~~~~~~~~~~~~~iyv~GG~~~~~~ 181 (289)
+-++.++.||+... ...++.+|..|++ |+.-...+... ....+.++ .+++||+...
T Consensus 72 ~P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~-~~~~v~v~~~------ 136 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS--------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL-WKGKVYVGAW------ 136 (677)
T ss_dssp CCEEETTEEEEECG--------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE-ETTEEEEECT------
T ss_pred CCEEECCEEEEECC--------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE-ECCEEEEEcC------
Confidence 34568999998743 3568899998876 87654432110 01122333 4888888632
Q ss_pred ccCceEEEEcCCCc--eEeCCC--CCcc-ccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc--eeec
Q 048803 182 ALKSAMAYDVARDE--WASLPD--MSRE-RDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPV 249 (289)
Q Consensus 182 ~~~~~~~yd~~~~~--W~~~~~--~~~~-~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 249 (289)
...+..+|.+|++ |+.-.. .... ......++.+++||+..+.... .....|.+||..+++ |+.-
T Consensus 137 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 137 -DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY---GVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp -TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEE
T ss_pred -CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccccc---CCCCEEEEEECCCCcEEEEec
Confidence 1358999998874 875322 1111 1123445678888876532110 022479999998875 8654
No 136
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.85 E-value=5.7 Score=36.44 Aligned_cols=168 Identities=8% Similarity=0.010 Sum_probs=82.2
Q ss_pred eEEEEECCCCCeEeCCCCCCC-CCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccC------CeEE---e--
Q 048803 82 RITVLELGSGEWSELPPIPGF-PDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIIS------ATWR---R-- 148 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t------~~W~---~-- 148 (289)
-+.+||+.+++++........ ........++... ++.|++. .. ..-+.+||+.+ .... .
T Consensus 393 GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig-T~-------~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 393 SINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIS-TC-------LGGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEE-ES-------SSCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred cHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEE-EC-------CCceEEEccccccccCCcceecccccc
Confidence 467789988887655311110 0000111223332 4678774 21 12366777653 2221 1
Q ss_pred -CCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCC-ccccccceEEE--CCEEEEEeee
Q 048803 149 -GADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMS-RERDECKAVFH--CGKLLVIGGY 224 (289)
Q Consensus 149 -~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~~~~~~~~--~~~l~~~gG~ 224 (289)
...++ .....+.....+|.|++.+|... -+.+||++++++..+..-. ........... +|.|++.. .
T Consensus 465 ~~~~l~--~~~i~~i~~d~~g~lWi~~~t~~------Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~ 535 (758)
T 3ott_A 465 VHNGLS--GMFINQIIPDNEGNVWVLLYNNK------GIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H 535 (758)
T ss_dssp GGGTCS--CSCEEEEEECTTSCEEEEETTCS------SEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T
T ss_pred cccccc--cceeeeEEEcCCCCEEEEccCCC------CcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c
Confidence 11222 11122333334788988666542 3899999999888763211 11111122222 57788643 1
Q ss_pred cCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCc
Q 048803 225 STNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREG 277 (289)
Q Consensus 225 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~ 277 (289)
+.+.+||+.++++.......++. ....+++.-+++|++.+..
T Consensus 536 ---------~Gl~~~~~~~~~~~~~~~~gl~~--~~i~~i~~~~g~lWi~t~~ 577 (758)
T 3ott_A 536 ---------GGVMRINPKDESQQSISFGSFSN--NEILSMTCVKNSIWVSTTN 577 (758)
T ss_dssp ---------TEEEEECC--CCCCBCCCCC-----CCEEEEEEETTEEEEEESS
T ss_pred ---------CceEEEecCCCceEEecccCCCc--cceEEEEECCCCEEEECCC
Confidence 25889999988887663211221 2223344457888887643
No 137
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.85 E-value=1.6 Score=35.77 Aligned_cols=93 Identities=14% Similarity=0.237 Sum_probs=49.3
Q ss_pred cceEEEEccCCeEEe-CCCCCCCCccceeEEEec--CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccc
Q 048803 134 SSVFVFNIISATWRR-GADMPGGRRMLFGCASDG--DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECK 210 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~ 210 (289)
..+.+||..+++-.. +.... .. ........ ++..++.|+.+. .+..+|+.+.+-...-.. ......
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~-~~--v~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~~--h~~~v~ 244 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHG-AD--VLCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQAFET--HESDVN 244 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCS-SC--EEEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEEECC--CSSCEE
T ss_pred CcEEEEeCCCCeEEEEEcCCC-CC--eEEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEEecC--CCCCeE
Confidence 457788988776422 22111 11 11222212 356777777654 388999888754322111 001112
Q ss_pred eEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 211 AVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 211 ~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
.+.+ ++..++.|+.++ .+..||..+++
T Consensus 245 ~v~~~p~~~~l~s~s~D~--------~v~lwd~~~~~ 273 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDA--------TCRLYDLRADR 273 (354)
T ss_dssp EEEECTTSSEEEEEETTS--------CEEEEETTTTE
T ss_pred EEEEeCCCCEEEEEeCCC--------eEEEEECCCCc
Confidence 2222 567777777653 58889987764
No 138
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=92.81 E-value=1.6 Score=34.87 Aligned_cols=134 Identities=10% Similarity=0.061 Sum_probs=66.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEE-eCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWR-RGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~ 159 (289)
..+.+||..++.-... +...... .......-+++.++.|+.+ ..+.+||..+++-. .+.... ...
T Consensus 35 g~v~lWd~~~~~~~~~--~~~~~~~--v~~~~~~~~~~~l~s~s~d-------~~i~vwd~~~~~~~~~~~~h~---~~v 100 (304)
T 2ynn_A 35 GRVELWNYETQVEVRS--IQVTETP--VRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKVVDFEAHP---DYI 100 (304)
T ss_dssp SEEEEEETTTTEEEEE--EECCSSC--EEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEEEEEECCS---SCE
T ss_pred CcEEEEECCCCceeEE--eeccCCc--EEEEEEeCCCCEEEEECCC-------CEEEEEECCCCcEEEEEeCCC---CcE
Confidence 5778899887653221 1111111 1112223345566666643 45788898876532 222111 112
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccc-cceEEE---CCEEEEEeeecCCCCCcccce
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDE-CKAVFH---CGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~---~~~l~~~gG~~~~~~~~~~~~ 235 (289)
.+++..-++.+.+.|+.+. .+..+|.+++. .....+ ..+.. ...+.+ ++.+++.|+.++ .
T Consensus 101 ~~~~~~~~~~~l~sgs~D~------~v~lWd~~~~~-~~~~~~-~~h~~~v~~v~~~p~~~~~l~sgs~D~--------~ 164 (304)
T 2ynn_A 101 RSIAVHPTKPYVLSGSDDL------TVKLWNWENNW-ALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLDR--------T 164 (304)
T ss_dssp EEEEECSSSSEEEEEETTS------CEEEEEGGGTT-EEEEEE-CCCCSCEEEEEECTTCTTEEEEEETTS--------E
T ss_pred EEEEEcCCCCEEEEECCCC------eEEEEECCCCc-chhhhh-cccCCcEEEEEECCCCCCEEEEEeCCC--------e
Confidence 2333323666777776554 37888877541 111001 11111 112222 456777777653 6
Q ss_pred EEEEECCCC
Q 048803 236 AEAFDAAAQ 244 (289)
Q Consensus 236 v~~yd~~~~ 244 (289)
|..||..+.
T Consensus 165 v~iwd~~~~ 173 (304)
T 2ynn_A 165 VKVWSLGQS 173 (304)
T ss_dssp EEEEETTCS
T ss_pred EEEEECCCC
Confidence 888998654
No 139
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.63 E-value=1.7 Score=35.04 Aligned_cols=137 Identities=13% Similarity=0.193 Sum_probs=67.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-C----CEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-G----PELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMP 153 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~----~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~ 153 (289)
..+.+||..+++............ ...+.. . +.+++.|+.+ ..+.+||..+.+ -..+....
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~ 111 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAKP-----IKCGTFGATSLQQRYLATGDFG-------GNLHIWNLEAPEMPVYSVKGHK 111 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESSC-----EEEEECTTCCTTTCCEEEEETT-------SCEEEECTTSCSSCSEEECCCS
T ss_pred cEEEEEeCCCCcccceeeecccCc-----EEEEEEcCCCCCCceEEEecCC-------CeEEEEeCCCCCccEEEEEecc
Confidence 578889988877654332221111 022222 2 3666666533 447788877654 12222111
Q ss_pred CCCccceeEEE------ecCCEEEEEcCCCCCCcccCceEEEEcCCCc--eEeCCCCCcc-ccccceEE------ECCEE
Q 048803 154 GGRRMLFGCAS------DGDRTVYVAGGHDEDKNALKSAMAYDVARDE--WASLPDMSRE-RDECKAVF------HCGKL 218 (289)
Q Consensus 154 ~~~~~~~~~~~------~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~-~~~~~~~~------~~~~l 218 (289)
.. ...... ..++...+.|+.+. .+..||+.+.. ...+...... ......+. -++++
T Consensus 112 -~~--v~~~~~~~~~~~s~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 182 (357)
T 3i2n_A 112 -EI--INAIDGIGGLGIGEGAPEIVTGSRDG------TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERV 182 (357)
T ss_dssp -SC--EEEEEEESGGGCC-CCCEEEEEETTS------CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCE
T ss_pred -cc--eEEEeeccccccCCCccEEEEEeCCC------eEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCE
Confidence 11 111111 12555666666543 48888888764 2333222211 00111111 36777
Q ss_pred EEEeeecCCCCCcccceEEEEECCCCce
Q 048803 219 LVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 219 ~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
++.|+.+ ..+..||..+.+-
T Consensus 183 l~~~~~d--------~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 183 VCAGYDN--------GDIKLFDLRNMAL 202 (357)
T ss_dssp EEEEETT--------SEEEEEETTTTEE
T ss_pred EEEEccC--------CeEEEEECccCce
Confidence 7777654 2689999987764
No 140
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=92.51 E-value=2.9 Score=37.14 Aligned_cols=121 Identities=13% Similarity=0.191 Sum_probs=69.7
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEc-cCCe--EEeCCCCCCCCc-------cceeEEEecCCEEEEEcCCCCCC
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNI-ISAT--WRRGADMPGGRR-------MLFGCASDGDRTVYVAGGHDEDK 180 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~~~-------~~~~~~~~~~~~iyv~GG~~~~~ 180 (289)
+-++.++.||+.... ...++.+|. .|++ |+.-........ ...+.++ .+++||+...
T Consensus 57 ~P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~----- 123 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY-GAGQIVKKQA----- 123 (571)
T ss_dssp CCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE-ETTEEEEECT-----
T ss_pred ccEEECCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE-ECCEEEEEeC-----
Confidence 345679999997431 346889998 7765 886543321100 0112333 4888888632
Q ss_pred cccCceEEEEcCCC--ceEeC-CCCCcc-ccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc--eeec
Q 048803 181 NALKSAMAYDVARD--EWASL-PDMSRE-RDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPV 249 (289)
Q Consensus 181 ~~~~~~~~yd~~~~--~W~~~-~~~~~~-~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 249 (289)
...+..+|.+++ .|+.- ...+.. ......++.+++||+..+..... ....+.+||.++++ |+.-
T Consensus 124 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~---~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 124 --NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELG---VRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGT---CCCEEEEEETTTCCEEEEEE
T ss_pred --CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccC---CCCEEEEEECCCCcEEEEEc
Confidence 135899999887 49743 222111 11233456789988754321100 12468999998764 8653
No 141
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=92.31 E-value=1.3 Score=43.13 Aligned_cols=134 Identities=16% Similarity=0.214 Sum_probs=69.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~ 159 (289)
..+.+||..+++...+...... ...+....+..++.|+. ...+.+||..+++-.. +.... .. .
T Consensus 1025 g~i~vwd~~~~~~~~~~~~~~~------v~~~~~~~~~~l~~~~~-------dg~v~vwd~~~~~~~~~~~~~~-~~--v 1088 (1249)
T 3sfz_A 1025 SVIQVWNWQTGDYVFLQAHQET------VKDFRLLQDSRLLSWSF-------DGTVKVWNVITGRIERDFTCHQ-GT--V 1088 (1249)
T ss_dssp SBEEEEETTTTEEECCBCCSSC------EEEEEECSSSEEEEEES-------SSEEEEEETTTTCCCEEEECCS-SC--C
T ss_pred CEEEEEECCCCceEEEecCCCc------EEEEEEcCCCcEEEEEC-------CCcEEEEECCCCceeEEEcccC-Cc--E
Confidence 5688899988876543321111 11233333434445543 2457888988765321 11111 11 1
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
.+.+..-++..++.|+.+. .+..||..+.. .+..+.........+. -+++++++|+.++ .|.
T Consensus 1089 ~~~~~s~d~~~l~s~s~d~------~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg--------~i~ 1152 (1249)
T 3sfz_A 1089 LSCAISSDATKFSSTSADK------TAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNG--------EIR 1152 (1249)
T ss_dssp CCEEECSSSSSCEEECCSS------CCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTS--------CCC
T ss_pred EEEEECCCCCEEEEEcCCC------cEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCC--------EEE
Confidence 2233334677777776543 37778877653 2222221111112222 3777888887653 478
Q ss_pred EEECCCCce
Q 048803 238 AFDAAAQQW 246 (289)
Q Consensus 238 ~yd~~~~~W 246 (289)
+||..+++-
T Consensus 1153 vwd~~~~~~ 1161 (1249)
T 3sfz_A 1153 IWNVSDGQL 1161 (1249)
T ss_dssp EEESSSSCC
T ss_pred EEECCCCce
Confidence 889887653
No 142
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=92.30 E-value=1.9 Score=34.46 Aligned_cols=116 Identities=10% Similarity=-0.027 Sum_probs=58.7
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCC--ccceeEEEecCCEEEEE----cCCCC-------CCcc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGR--RMLFGCASDGDRTVYVA----GGHDE-------DKNA 182 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~--~~~~~~~~~~~~~iyv~----GG~~~-------~~~~ 182 (289)
++++|++.. ....+.+||+. ++.+.+....... ......+..-+|.+|+. |...+ ....
T Consensus 96 dG~l~v~~~-------~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~ 167 (305)
T 3dr2_A 96 QQRLVHCEH-------GRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELA 167 (305)
T ss_dssp TSCEEEEET-------TTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSS
T ss_pred CCCEEEEEC-------CCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccC
Confidence 567887632 12467888885 6665543221111 11223444348889986 32211 0011
Q ss_pred cCceEEEEcCCCceEeCCCCCccccccceEE-ECC-EEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 183 LKSAMAYDVARDEWASLPDMSRERDECKAVF-HCG-KLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 183 ~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
...++.||+++++...+. .... ..+.+. -++ .||+........ ....|++||...+.
T Consensus 168 ~~~v~~~d~~~g~~~~~~--~~~~-p~gl~~spdg~~lyv~~~~~~~~---~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMA--DLDH-PNGLAFSPDEQTLYVSQTPEQGH---GSVEITAFAWRDGA 226 (305)
T ss_dssp CEEEEEECSSSCCCEEEE--EESS-EEEEEECTTSSEEEEEECCC------CCCEEEEEEEETTE
T ss_pred CCeEEEEcCCCCcEEEEe--cCCC-CcceEEcCCCCEEEEEecCCcCC---CCCEEEEEEecCCC
Confidence 346899999888877653 1111 112222 244 477765321100 11368888886554
No 143
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.22 E-value=3.3 Score=37.58 Aligned_cols=120 Identities=17% Similarity=0.171 Sum_probs=69.9
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCCCc-------cceeEEEecCCEEEEEcCCCCCCc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGGRR-------MLFGCASDGDRTVYVAGGHDEDKN 181 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~-------~~~~~~~~~~~~iyv~GG~~~~~~ 181 (289)
+-++.++.||+... ...++.+|..|++ |+.-...+.... ...+.++ .+++||+...
T Consensus 61 ~P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~~~------ 125 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS--------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL-WGDKVYVGTL------ 125 (668)
T ss_dssp CCEEETTEEEEEEG--------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE-EBTEEEEECT------
T ss_pred CCEEECCEEEEECC--------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEE-ECCEEEEEcC------
Confidence 34568999999753 3468889988876 876544321100 0112333 4788887632
Q ss_pred ccCceEEEEcCCCc--eEeCCC-CCc-cccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc--eeec
Q 048803 182 ALKSAMAYDVARDE--WASLPD-MSR-ERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPV 249 (289)
Q Consensus 182 ~~~~~~~yd~~~~~--W~~~~~-~~~-~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 249 (289)
...+..+|.+|++ |+.-.. .+. .......++.+++||+..+.... .....+.+||..+++ |+.-
T Consensus 126 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY---GVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp -TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEE
T ss_pred -CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc---CCCCEEEEEECCCCcEEEEec
Confidence 1358999999874 875432 111 11223445678988875332110 022479999998875 8753
No 144
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=92.20 E-value=1.7 Score=34.59 Aligned_cols=138 Identities=8% Similarity=-0.023 Sum_probs=68.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCC-Ccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGG-RRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-~~~ 158 (289)
..+++||+.+++..... .+... ..++. -++++|+.. ...+.+||+.+++++.+...... +..
T Consensus 35 ~~i~~~d~~~~~~~~~~-~~~~~------~~i~~~~dG~l~v~~---------~~~l~~~d~~~g~~~~~~~~~~~~~~~ 98 (297)
T 3g4e_A 35 KKVCRWDSFTKQVQRVT-MDAPV------SSVALRQSGGYVATI---------GTKFCALNWKEQSAVVLATVDNDKKNN 98 (297)
T ss_dssp TEEEEEETTTCCEEEEE-CSSCE------EEEEEBTTSSEEEEE---------TTEEEEEETTTTEEEEEEECCTTCSSE
T ss_pred CEEEEEECCCCcEEEEe-CCCce------EEEEECCCCCEEEEE---------CCeEEEEECCCCcEEEEEecCCCCCCC
Confidence 57889999887654332 12111 12222 345666642 24688999999988766443211 111
Q ss_pred -ceeEEEecCCEEEEEcCCCCC-----CcccCceEEEEcCCCceEeCC-CCCccccccceEEE-CC-EEEEEeeecCCCC
Q 048803 159 -LFGCASDGDRTVYVAGGHDED-----KNALKSAMAYDVARDEWASLP-DMSRERDECKAVFH-CG-KLLVIGGYSTNAQ 229 (289)
Q Consensus 159 -~~~~~~~~~~~iyv~GG~~~~-----~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~-~~-~l~~~gG~~~~~~ 229 (289)
....++.-+|++|+..-.... ......++.+|+.. +-..+. .+..+ .+.+.. ++ .||+.....
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p---ngi~~spdg~~lyv~~~~~---- 170 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS---NGLDWSLDHKIFYYIDSLS---- 170 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE---EEEEECTTSCEEEEEEGGG----
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc---cceEEcCCCCEEEEecCCC----
Confidence 233444347888875321110 01223577787753 322221 11111 122222 44 577775432
Q ss_pred CcccceEEEEEC--CCCce
Q 048803 230 GRFERHAEAFDA--AAQQW 246 (289)
Q Consensus 230 ~~~~~~v~~yd~--~~~~W 246 (289)
+.|++||. .+++.
T Consensus 171 ----~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 171 ----YSVDAFDYDLQTGQI 185 (297)
T ss_dssp ----TEEEEEEECTTTCCE
T ss_pred ----CcEEEEeccCCCCcc
Confidence 36788875 45543
No 145
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=92.16 E-value=3 Score=33.67 Aligned_cols=105 Identities=11% Similarity=0.170 Sum_probs=56.6
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
+.+++.|+.+ ..+.+||..+++-.. +.... ....++...- ++.+++.|+.+. .+..||..+.
T Consensus 85 ~~~l~~~~~d-------g~i~v~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~l~s~~~dg------~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSR-------GIIRIINPITMQCIKHYVGHG---NAINELKFHPRDPNLLLSVSKDH------ALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETT-------CEEEEECTTTCCEEEEEESCC---SCEEEEEECSSCTTEEEEEETTS------CEEEEETTTT
T ss_pred CCEEEEecCC-------CEEEEEEchhceEeeeecCCC---CcEEEEEECCCCCCEEEEEeCCC------eEEEEEeecC
Confidence 4677777643 458889988765322 22111 1122333322 567777776543 4889999877
Q ss_pred ceEeC-CCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 195 EWASL-PDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 195 ~W~~~-~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+-... ..+.........+.+ +++.++.|+.++ .+..||..+.+
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~ 194 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH--------SLKLWRINSKR 194 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEESCSHH
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEecCCC--------CEEEEECCCCc
Confidence 54322 111111111222222 566777776543 58899987654
No 146
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.94 E-value=3.8 Score=32.33 Aligned_cols=175 Identities=14% Similarity=0.010 Sum_probs=84.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCC-CCCCCceeEEEEeCCEEEEE----eCcC------CCCcccccceEEEEccCCeEEeC
Q 048803 81 YRITVLELGSGEWSELPPIPGF-PDGLPLFCQLSAVGPELVVI----GGLD------LTTWEASSSVFVFNIISATWRRG 149 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~lyv~----GG~~------~~~~~~~~~~~~yd~~t~~W~~~ 149 (289)
..+.+||+.+++.+.+...... ....+ ......-++++|+. |... .........++++|+. ++.+.+
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~-~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEGKKLNSP-NDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAP 167 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETTEECCCC-CCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEE
T ss_pred CeEEEEcCCCCcEEEEeeccCCCCCCCC-CCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEe
Confidence 4688899988877655322111 10000 01223346788886 3211 0000123578999987 555544
Q ss_pred CCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcC-CCce-E--eCCCCCccccccceEE-ECCEEEEEeee
Q 048803 150 ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVA-RDEW-A--SLPDMSRERDECKAVF-HCGKLLVIGGY 224 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~-~~~W-~--~~~~~~~~~~~~~~~~-~~~~l~~~gG~ 224 (289)
.... ....+.+..-++++++..... ..+..||+. +++. . .+-...... ..+++. -+|+||+..
T Consensus 168 ~~~~---~~~~gi~~s~dg~~lv~~~~~------~~i~~~~~~~~g~~~~~~~~~~~~~~~-p~~i~~d~~G~l~v~~-- 235 (296)
T 3e5z_A 168 IRDR---VKPNGLAFLPSGNLLVSDTGD------NATHRYCLNARGETEYQGVHFTVEPGK-TDGLRVDAGGLIWASA-- 235 (296)
T ss_dssp ECCC---SSEEEEEECTTSCEEEEETTT------TEEEEEEECSSSCEEEEEEEECCSSSC-CCSEEEBTTSCEEEEE--
T ss_pred ecCC---CCCccEEECCCCCEEEEeCCC------CeEEEEEECCCCcCcCCCeEeeCCCCC-CCeEEECCCCCEEEEc--
Confidence 3221 112344443467666553322 358888886 4454 1 111111111 112222 368888876
Q ss_pred cCCCCCcccceEEEEECCCCceeecccccccCCCCCCceee-eeC-CeEEEEeCceeecc
Q 048803 225 STNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAG-VDS-NDLYMCREGDVMAL 282 (289)
Q Consensus 225 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~-~~ly~~GG~~~~~~ 282 (289)
. +.|.+||++......+.. +.. +..+++ .-+ +.||+.+......+
T Consensus 236 ~--------~~v~~~~~~g~~~~~~~~---~~~--~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 236 G--------DGVHVLTPDGDELGRVLT---PQT--TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp T--------TEEEEECTTSCEEEEEEC---SSC--CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred C--------CeEEEECCCCCEEEEEEC---CCC--ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 1 268999998655444443 111 222222 123 35777765544333
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.91 E-value=3.5 Score=31.90 Aligned_cols=150 Identities=13% Similarity=0.057 Sum_probs=75.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-C-CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-G-PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..++.++..+++-..+..... . ..+... + ..|++.++.+ ....++.+|..+.....+..... .
T Consensus 110 ~~l~~~~~~~~~~~~~~~~~~---~----~~~~~spdg~~l~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~-~-- 174 (297)
T 2ojh_A 110 SAIYLLPSTGGTPRLMTKNLP---S----YWHGWSPDGKSFTYCGIRD-----QVFDIYSMDIDSGVETRLTHGEG-R-- 174 (297)
T ss_dssp CEEEEEETTCCCCEECCSSSS---E----EEEEECTTSSEEEEEEEET-----TEEEEEEEETTTCCEEECCCSSS-C--
T ss_pred ceEEEEECCCCceEEeecCCC---c----cceEECCCCCEEEEEECCC-----CceEEEEEECCCCcceEcccCCC-c--
Confidence 577888887776555543221 0 122222 3 3455555432 23467777888777766654431 1
Q ss_pred ceeEEEecCCE-EEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceE-EECCEEEEEeeecCCCCC---ccc
Q 048803 159 LFGCASDGDRT-VYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAV-FHCGKLLVIGGYSTNAQG---RFE 233 (289)
Q Consensus 159 ~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~l~~~gG~~~~~~~---~~~ 233 (289)
.......-++. |++.+..+. ...++.++..+.....+....... ...+ .-+++.+++++....... ...
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTG----QMQIWRVRVDGSSVERITDSAYGD--WFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTS----SCEEEEEETTSSCEEECCCCSEEE--EEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred cccceECCCCCEEEEEecCCC----CccEEEECCCCCCcEEEecCCccc--CCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 12233323555 444443222 235777777777666654433111 1111 125665555544321100 012
Q ss_pred ceEEEEECCCCceeeccc
Q 048803 234 RHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 234 ~~v~~yd~~~~~W~~~~~ 251 (289)
..++.+|..+++...+..
T Consensus 249 ~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp EEEEEEETTSCSCEEEEE
T ss_pred eEEEEEecCCCCceeeec
Confidence 468999999888766553
No 148
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=91.88 E-value=4.7 Score=33.30 Aligned_cols=144 Identities=10% Similarity=0.103 Sum_probs=66.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCC-ceeEEEEeC--CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCC-CCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLP-LFCQLSAVG--PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMP-GGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~-~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~~ 156 (289)
..+.+||..+.+-...-..+.....+. ....++... ..+++.|+.++. ...+.+||..+..- .+..+. ...
T Consensus 188 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~----~~~i~~~d~~~~~~-~~~~~~~~~~ 262 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN----DPSILIWDLRNANT-PLQTLNQGHQ 262 (416)
T ss_dssp SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS----SCCCCEEETTSTTS-CSBCCCSCCS
T ss_pred CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC----CceEEEEeCCCCCC-CcEEeecCcc
Confidence 468889988776433222221110000 011222222 246666664321 12678899877531 111121 111
Q ss_pred ccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CC-EEEEEeeecCCCCCcc
Q 048803 157 RMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CG-KLLVIGGYSTNAQGRF 232 (289)
Q Consensus 157 ~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~l~~~gG~~~~~~~~~ 232 (289)
.....++..- ++.+++.|+.+. .+..||+.+.+-.. .+.........+.+ ++ ++++.++.++
T Consensus 263 ~~v~~~~~s~~~~~~l~s~~~dg------~v~~wd~~~~~~~~--~~~~~~~~v~~~~~s~~~~~~l~s~~~d~------ 328 (416)
T 2pm9_A 263 KGILSLDWCHQDEHLLLSSGRDN------TVLLWNPESAEQLS--QFPARGNWCFKTKFAPEAPDLFACASFDN------ 328 (416)
T ss_dssp SCEEEEEECSSCSSCEEEEESSS------EEEEECSSSCCEEE--EEECSSSCCCCEEECTTCTTEEEECCSSS------
T ss_pred CceeEEEeCCCCCCeEEEEeCCC------CEEEeeCCCCccce--eecCCCCceEEEEECCCCCCEEEEEecCC------
Confidence 1122333322 567777776543 48888888764221 11111111111222 34 5777776542
Q ss_pred cceEEEEECCCCc
Q 048803 233 ERHAEAFDAAAQQ 245 (289)
Q Consensus 233 ~~~v~~yd~~~~~ 245 (289)
.|.+||..+..
T Consensus 329 --~i~iw~~~~~~ 339 (416)
T 2pm9_A 329 --KIEVQTLQNLT 339 (416)
T ss_dssp --EEEEEESCCCC
T ss_pred --cEEEEEccCCC
Confidence 57777776543
No 149
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.76 E-value=1.1 Score=37.95 Aligned_cols=109 Identities=10% Similarity=0.105 Sum_probs=58.0
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++.+++.|+.+ ..+.+||..+..-...-.+........+++.. .++.+++.|+.+. .+.++|.+++
T Consensus 131 ~~~~lasGs~d-------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~------~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKG-------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG------TTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETT-------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS------CEEEEETTSC
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC------EEEEeeccCC
Confidence 35577777644 34788888766532222221011112223332 2566777777654 3788898877
Q ss_pred ceEeCCCCCccccc-cceE-EECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 195 EWASLPDMSRERDE-CKAV-FHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 195 ~W~~~~~~~~~~~~-~~~~-~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
.-..+......... .+.. .-++++++.|+.++ .|..||...+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg--------~i~~wd~~~~~ 242 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG--------NVILLNMDGKE 242 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS--------BEEEEESSSCB
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC--------cEeeeccCcce
Confidence 65544322211111 1222 23677788876543 58889987654
No 150
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=91.65 E-value=4.5 Score=33.36 Aligned_cols=94 Identities=12% Similarity=0.141 Sum_probs=47.3
Q ss_pred CEEEEEcCCCCCCcccCceEEEEcCCCceEeC--CCCCccccccc-eEE---ECCEEEEEeeecCCCCCcccceEEEEEC
Q 048803 168 RTVYVAGGHDEDKNALKSAMAYDVARDEWASL--PDMSRERDECK-AVF---HCGKLLVIGGYSTNAQGRFERHAEAFDA 241 (289)
Q Consensus 168 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~~~~~~-~~~---~~~~l~~~gG~~~~~~~~~~~~v~~yd~ 241 (289)
+...+.|+.+. .+..+|+.+++-... ...+..+.... .+. .++.+++.|+.++ .|..||.
T Consensus 170 ~~~l~s~s~D~------~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~ 235 (380)
T 3iz6_a 170 ETRLITGSGDQ------TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDL 235 (380)
T ss_dssp SSCEEEECTTS------CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEET
T ss_pred CCEEEEECCCC------cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEEC
Confidence 34455555443 488899888754322 12222222111 122 2678888888753 5888998
Q ss_pred CCC--ceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 242 AAQ--QWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 242 ~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
... .-..+.. ............+++.++.|+.|+
T Consensus 236 ~~~~~~~~~~~~----h~~~v~~v~~~p~~~~l~s~s~D~ 271 (380)
T 3iz6_a 236 RITSRAVRTYHG----HEGDINSVKFFPDGQRFGTGSDDG 271 (380)
T ss_dssp TTTCCCCEEECC----CSSCCCEEEECTTSSEEEEECSSS
T ss_pred CCCCcceEEECC----cCCCeEEEEEecCCCeEEEEcCCC
Confidence 632 1111111 111111122334677777777654
No 151
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=91.61 E-value=4.4 Score=32.38 Aligned_cols=133 Identities=14% Similarity=0.047 Sum_probs=68.8
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..++++|+..+. ......+. .. ..++. -++++|+..... ....++++|+.+++.+.+...+. .+..
T Consensus 53 ~~I~~~d~~g~~-~~~~~~~~--~p----~gia~~~dG~l~vad~~~-----~~~~v~~~d~~~g~~~~~~~~~~-~~~~ 119 (306)
T 2p4o_A 53 GEIVSITPDGNQ-QIHATVEG--KV----SGLAFTSNGDLVATGWNA-----DSIPVVSLVKSDGTVETLLTLPD-AIFL 119 (306)
T ss_dssp TEEEEECTTCCE-EEEEECSS--EE----EEEEECTTSCEEEEEECT-----TSCEEEEEECTTSCEEEEEECTT-CSCE
T ss_pred CeEEEECCCCce-EEEEeCCC--Cc----eeEEEcCCCcEEEEeccC-----CcceEEEEcCCCCeEEEEEeCCC-cccc
Confidence 467888887643 22211221 11 12333 256788875321 12347889988888776655442 2223
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC---ceEeC---------CCCCccccccceEEECCEEEEEeeecCC
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD---EWASL---------PDMSRERDECKAVFHCGKLLVIGGYSTN 227 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~---------~~~~~~~~~~~~~~~~~~l~~~gG~~~~ 227 (289)
.+.+...++.+|+... ....++.+|+.+. .|..- ..+..+ .+...-++.||+.--.
T Consensus 120 ~g~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~p---ngis~dg~~lyv~d~~--- 187 (306)
T 2p4o_A 120 NGITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAA---NGLKRFGNFLYVSNTE--- 187 (306)
T ss_dssp EEEEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSE---EEEEEETTEEEEEETT---
T ss_pred CcccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcC---CCcCcCCCEEEEEeCC---
Confidence 3444334667787632 1236889998764 23111 111111 1122334578887532
Q ss_pred CCCcccceEEEEECCC
Q 048803 228 AQGRFERHAEAFDAAA 243 (289)
Q Consensus 228 ~~~~~~~~v~~yd~~~ 243 (289)
.+.|.+||+..
T Consensus 188 -----~~~I~~~~~~~ 198 (306)
T 2p4o_A 188 -----KMLLLRIPVDS 198 (306)
T ss_dssp -----TTEEEEEEBCT
T ss_pred -----CCEEEEEEeCC
Confidence 24799999875
No 152
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.48 E-value=2.4 Score=36.03 Aligned_cols=108 Identities=16% Similarity=0.054 Sum_probs=54.6
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEe--CCCCCCCCccceeEEEecC---CEEEEEcCCCCCCcccCceEEEE
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRR--GADMPGGRRMLFGCASDGD---RTVYVAGGHDEDKNALKSAMAYD 190 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~--~~~~~~~~~~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~~yd 190 (289)
+++.+++|+. ...++.++..+.+-.. ...+.........++..-+ +.+++.|+.+. .+..||
T Consensus 160 ~~~~l~~~~~-------~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~------~i~vwd 226 (450)
T 2vdu_B 160 DDTTVIIADK-------FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDE------HIKISH 226 (450)
T ss_dssp TSSEEEEEET-------TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTS------CEEEEE
T ss_pred CCCEEEEEeC-------CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCC------cEEEEE
Confidence 4555555543 2446788876654321 1111100111122332236 77777776543 488899
Q ss_pred cCCCceEe--CCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 191 VARDEWAS--LPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 191 ~~~~~W~~--~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
+.+..-.. +....... ...... ++++++.|+.+ ..|.+||..+++-
T Consensus 227 ~~~~~~~~~~~~~h~~~v-~~~~~s-d~~~l~s~~~d--------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 227 YPQCFIVDKWLFGHKHFV-SSICCG-KDYLLLSAGGD--------DKIFAWDWKTGKN 274 (450)
T ss_dssp ESCTTCEEEECCCCSSCE-EEEEEC-STTEEEEEESS--------SEEEEEETTTCCE
T ss_pred CCCCceeeeeecCCCCce-EEEEEC-CCCEEEEEeCC--------CeEEEEECCCCcE
Confidence 88764321 11111111 111122 77778887754 2688999988764
No 153
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.44 E-value=5.2 Score=32.95 Aligned_cols=106 Identities=9% Similarity=0.047 Sum_probs=53.4
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+++++++|+.+ ..+.+||.....-..+.... .. ...++..-++..++.++.+. .+..||..+.+
T Consensus 119 ~~~~l~~~~~d-------g~i~i~~~~~~~~~~~~~~~-~~--v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~ 182 (425)
T 1r5m_A 119 DGNSIVTGVEN-------GELRLWNKTGALLNVLNFHR-AP--IVSVKWNKDGTHIISMDVEN------VTILWNVISGT 182 (425)
T ss_dssp TSSEEEEEETT-------SCEEEEETTSCEEEEECCCC-SC--EEEEEECTTSSEEEEEETTC------CEEEEETTTTE
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeeccCCC-cc--EEEEEECCCCCEEEEEecCC------eEEEEECCCCc
Confidence 45666666543 35778885444444443222 11 23333323666666665443 37888888775
Q ss_pred eEeCCCCCccc--------------cccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 196 WASLPDMSRER--------------DECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 196 W~~~~~~~~~~--------------~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
-...-...... .........+..+++|+.+ ..+..||..+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~i~~~d~~~~~ 238 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK--------GAIFVYQITEKT 238 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTEEEEECGG--------GCEEEEETTCSS
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC--------CeEEEEEcCCCc
Confidence 43221111110 0122233333445666554 368999998764
No 154
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=91.37 E-value=2 Score=35.29 Aligned_cols=107 Identities=7% Similarity=0.020 Sum_probs=56.1
Q ss_pred EEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 118 ELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 118 ~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
.+++.|+.+ ..+.+||..+.+...............+++..- ++.+++.|+.+. .+..+|..+...
T Consensus 87 ~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKG-------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG------ATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBT-------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT------EEEEEETTSCEE
T ss_pred CEEEEEcCC-------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC------EEEEEECCCCce
Confidence 456666533 457888888776554433211111222333322 346666665443 488899887665
Q ss_pred EeCCCCCccccccceE--EECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 197 ASLPDMSRERDECKAV--FHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~--~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
..+............+ .-+++.++.|+.+ ..|..||.....
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~ 196 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDST--------GRLLLLGLDGHE 196 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEETT--------SEEEEEETTSCE
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECCC--------CCEEEEECCCCE
Confidence 5443222111111111 2356777777654 368899985443
No 155
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.25 E-value=2.2 Score=39.22 Aligned_cols=135 Identities=13% Similarity=0.137 Sum_probs=65.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCC-eEEeC-CCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISA-TWRRG-ADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~-~~~~~~~~ 157 (289)
..+.+||..+++....-. ..... . ..++. -++..++.|+. -..+.+||..++ ..... .... .+
T Consensus 77 g~i~vw~~~~~~~~~~~~--~~~~~--v-~~~~~s~~~~~l~~~~~-------dg~i~vw~~~~~~~~~~~~~~~~-~~- 142 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFE--AHPDY--I-RSIAVHPTKPYVLSGSD-------DLTVKLWNWENNWALEQTFEGHE-HF- 142 (814)
T ss_dssp SEEEEEETTTCCEEEEEE--CCSSC--E-EEEEECSSSSEEEEEET-------TSEEEEEEGGGTSEEEEEEECCS-SC-
T ss_pred CeEEEEECCCCcEEEEEe--cCCCC--E-EEEEEeCCCCEEEEEcC-------CCEEEEEECCCCceEEEEEcCCC-Cc-
Confidence 578889988776532211 11111 0 12222 24445555553 245788888776 33222 2111 11
Q ss_pred cceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE----CCEEEEEeeecCCCCCcc
Q 048803 158 MLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH----CGKLLVIGGYSTNAQGRF 232 (289)
Q Consensus 158 ~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~----~~~l~~~gG~~~~~~~~~ 232 (289)
...++..- ++.++++|+.+. .+..||..+..-......... .....+.+ ++..+++|+.+
T Consensus 143 -v~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~~~d------- 207 (814)
T 3mkq_A 143 -VMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQE-RGVNYVDYYPLPDKPYMITASDD------- 207 (814)
T ss_dssp -EEEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEEEECCCT-TCCCEEEECCSTTCCEEEEECTT-------
T ss_pred -EEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeEEecCCC-CCEEEEEEEECCCCCEEEEEeCC-------
Confidence 22233322 456777766543 488888876532111000100 11122222 67777777654
Q ss_pred cceEEEEECCCCc
Q 048803 233 ERHAEAFDAAAQQ 245 (289)
Q Consensus 233 ~~~v~~yd~~~~~ 245 (289)
..+..||..+++
T Consensus 208 -g~i~~~d~~~~~ 219 (814)
T 3mkq_A 208 -LTIKIWDYQTKS 219 (814)
T ss_dssp -SEEEEEETTTTE
T ss_pred -CEEEEEECCCCc
Confidence 268889987765
No 156
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=91.12 E-value=2.2 Score=35.56 Aligned_cols=135 Identities=13% Similarity=0.197 Sum_probs=65.7
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||..+++-... +...... -.+++.. ++..++.|+.+ ..+.+||..+++....-... .. .
T Consensus 145 ~~i~iwd~~~~~~~~~--~~~h~~~---v~~~~~~p~~~~l~s~s~d-------~~v~iwd~~~~~~~~~~~~~-~~--v 209 (393)
T 1erj_A 145 RLIRIWDIENRKIVMI--LQGHEQD---IYSLDYFPSGDKLVSGSGD-------RTVRIWDLRTGQCSLTLSIE-DG--V 209 (393)
T ss_dssp SCEEEEETTTTEEEEE--ECCCSSC---EEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECS-SC--E
T ss_pred CeEEEEECCCCcEEEE--EccCCCC---EEEEEEcCCCCEEEEecCC-------CcEEEEECCCCeeEEEEEcC-CC--c
Confidence 5678899887754322 1111111 0122222 34455555533 45788899887754322222 11 2
Q ss_pred eeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEe-CCCCC---ccccc-cceEEE--CCEEEEEeeecCCCCCc
Q 048803 160 FGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWAS-LPDMS---RERDE-CKAVFH--CGKLLVIGGYSTNAQGR 231 (289)
Q Consensus 160 ~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~-~~~~~---~~~~~-~~~~~~--~~~l~~~gG~~~~~~~~ 231 (289)
...+..- ++.+++.|+.+. .+..||..+..-.. +.... ..+.. ...+.+ +++.++.|+.++
T Consensus 210 ~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~----- 278 (393)
T 1erj_A 210 TTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR----- 278 (393)
T ss_dssp EEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS-----
T ss_pred EEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC-----
Confidence 2233322 677777777554 38889988765322 11111 11111 111222 677777776643
Q ss_pred ccceEEEEECCCC
Q 048803 232 FERHAEAFDAAAQ 244 (289)
Q Consensus 232 ~~~~v~~yd~~~~ 244 (289)
.|..||..+.
T Consensus 279 ---~v~~wd~~~~ 288 (393)
T 1erj_A 279 ---SVKLWNLQNA 288 (393)
T ss_dssp ---EEEEEEC---
T ss_pred ---EEEEEECCCC
Confidence 5788887653
No 157
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.00 E-value=5.7 Score=32.57 Aligned_cols=63 Identities=8% Similarity=0.116 Sum_probs=34.2
Q ss_pred EEEEEeCcCCCCcccccceEEEEccCCe------EEeCCCCCCC--CccceeEEEe----cCCEE-EEEcCCCCCCcccC
Q 048803 118 ELVVIGGLDLTTWEASSSVFVFNIISAT------WRRGADMPGG--RRMLFGCASD----GDRTV-YVAGGHDEDKNALK 184 (289)
Q Consensus 118 ~lyv~GG~~~~~~~~~~~~~~yd~~t~~------W~~~~~~~~~--~~~~~~~~~~----~~~~i-yv~GG~~~~~~~~~ 184 (289)
.+++.|+.+ ..+.+||..+++ +..+...... ......++.. -++.. ++.|+.+.
T Consensus 82 ~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg------ 148 (397)
T 1sq9_A 82 CLVATTSFS-------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG------ 148 (397)
T ss_dssp EEEEEEETT-------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS------
T ss_pred cEEEEEcCC-------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC------
Confidence 677776643 457888887766 6666544210 1112333333 34556 67666543
Q ss_pred ceEEEEcCC
Q 048803 185 SAMAYDVAR 193 (289)
Q Consensus 185 ~~~~yd~~~ 193 (289)
.+..||..+
T Consensus 149 ~i~iwd~~~ 157 (397)
T 1sq9_A 149 TTYIWKFHP 157 (397)
T ss_dssp CEEEEEEES
T ss_pred cEEEEeCCc
Confidence 377788776
No 158
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=90.98 E-value=1.7 Score=36.17 Aligned_cols=106 Identities=10% Similarity=0.135 Sum_probs=57.5
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+++.++.|+.+ ..+.+||..+.+-...-.-. .....+++..-++...+.|+.+. .+..+|..+++
T Consensus 134 dg~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~d~------~v~iwd~~~~~ 198 (393)
T 1erj_A 134 DGKFLATGAED-------RLIRIWDIENRKIVMILQGH--EQDIYSLDYFPSGDKLVSGSGDR------TVRIWDLRTGQ 198 (393)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTS------EEEEEETTTTE
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcEEEEEccC--CCCEEEEEEcCCCCEEEEecCCC------cEEEEECCCCe
Confidence 45666666643 45788999887643321111 11122333323566666666443 48888988775
Q ss_pred eEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 196 WASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
-...-..... ....+.. ++++++.|+.++ .|..||..+++-
T Consensus 199 ~~~~~~~~~~--v~~~~~~~~~~~~l~~~s~d~--------~v~iwd~~~~~~ 241 (393)
T 1erj_A 199 CSLTLSIEDG--VTTVAVSPGDGKYIAAGSLDR--------AVRVWDSETGFL 241 (393)
T ss_dssp EEEEEECSSC--EEEEEECSTTCCEEEEEETTS--------CEEEEETTTCCE
T ss_pred eEEEEEcCCC--cEEEEEECCCCCEEEEEcCCC--------cEEEEECCCCcE
Confidence 4322111111 1112221 677888887653 588899887653
No 159
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.91 E-value=2.2 Score=34.15 Aligned_cols=110 Identities=5% Similarity=-0.044 Sum_probs=59.3
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCC
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVAR 193 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~ 193 (289)
.++.+|+.+. ....+.+||+.+++....-..+... . ..+..-++ .+|+.+..+ ..+..+|+.+
T Consensus 8 ~~~~~~v~~~-------~~~~v~~~d~~~~~~~~~~~~~~~~--~-~~~~s~dg~~l~~~~~~~------~~i~~~d~~~ 71 (331)
T 3u4y_A 8 TSNFGIVVEQ-------HLRRISFFSTDTLEILNQITLGYDF--V-DTAITSDCSNVVVTSDFC------QTLVQIETQL 71 (331)
T ss_dssp CCCEEEEEEG-------GGTEEEEEETTTCCEEEEEECCCCE--E-EEEECSSSCEEEEEESTT------CEEEEEECSS
T ss_pred CCCEEEEEec-------CCCeEEEEeCcccceeeeEEccCCc--c-eEEEcCCCCEEEEEeCCC------CeEEEEECCC
Confidence 3567788765 2457899999998875543333111 2 34433355 477775432 2589999988
Q ss_pred Cce-E-eCCCCCccccccceEE-ECC-EEEEEeeecCCCCCcccceEEEEECCCCceee
Q 048803 194 DEW-A-SLPDMSRERDECKAVF-HCG-KLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP 248 (289)
Q Consensus 194 ~~W-~-~~~~~~~~~~~~~~~~-~~~-~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~ 248 (289)
++- . .+.....+. .+.+. -++ .+| .+..... ...+.+||..+++-..
T Consensus 72 ~~~~~~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~~-----~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 72 EPPKVVAIQEGQSSM--ADVDITPDDQFAV-TVTGLNH-----PFNMQSYSFLKNKFIS 122 (331)
T ss_dssp SSCEEEEEEECSSCC--CCEEECTTSSEEE-ECCCSSS-----SCEEEEEETTTTEEEE
T ss_pred CceeEEecccCCCCc--cceEECCCCCEEE-EecCCCC-----cccEEEEECCCCCeEE
Confidence 764 2 211111111 11222 244 455 3322110 1268999998876543
No 160
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=90.89 E-value=2.4 Score=41.18 Aligned_cols=167 Identities=11% Similarity=-0.025 Sum_probs=79.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
..+.+||..+++......-....-. .....-+++.++.|+.+ ..+.+||..+++........ ....
T Consensus 983 g~i~i~d~~~~~~~~~~~~h~~~v~----~l~~s~dg~~l~s~~~d-------g~i~vwd~~~~~~~~~~~~~---~~v~ 1048 (1249)
T 3sfz_A 983 GAIKIIELPNNRVFSSGVGHKKAVR----HIQFTADGKTLISSSED-------SVIQVWNWQTGDYVFLQAHQ---ETVK 1048 (1249)
T ss_dssp SCCEEEETTTTSCEEECCCCSSCCC----CEEECSSSSCEEEECSS-------SBEEEEETTTTEEECCBCCS---SCEE
T ss_pred CCEEEEEcCCCceeeecccCCCceE----EEEECCCCCEEEEEcCC-------CEEEEEECCCCceEEEecCC---CcEE
Confidence 3567788776654322111111110 11223355666666643 45889999998876544332 1122
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEE
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
..+..-++.+ +.++.+. .+..+|..+++-...-......-......-+++.++.|+.++ .+..||
T Consensus 1049 ~~~~~~~~~l-~~~~~dg------~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~--------~v~iwd 1113 (1249)
T 3sfz_A 1049 DFRLLQDSRL-LSWSFDG------TVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADK--------TAKIWS 1113 (1249)
T ss_dssp EEEECSSSEE-EEEESSS------EEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSS--------CCCEEC
T ss_pred EEEEcCCCcE-EEEECCC------cEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCC--------cEEEEE
Confidence 3333224544 4444432 488889887642211000001001111223667777776643 477888
Q ss_pred CCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 241 AAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 241 ~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
..+.+ .+.... .............++++++.|+.|+
T Consensus 1114 ~~~~~--~~~~l~-~h~~~v~~~~~s~dg~~lat~~~dg 1149 (1249)
T 3sfz_A 1114 FDLLS--PLHELK-GHNGCVRCSAFSLDGILLATGDDNG 1149 (1249)
T ss_dssp SSSSS--CSBCCC-CCSSCEEEEEECSSSSEEEEEETTS
T ss_pred CCCcc--eeeeec-cCCCcEEEEEECCCCCEEEEEeCCC
Confidence 77654 222210 1111111122345788888887654
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.84 E-value=2.9 Score=33.67 Aligned_cols=96 Identities=11% Similarity=0.158 Sum_probs=47.3
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCCCCCCceeEEE-----EeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCC
Q 048803 81 YRITVLELGSGE--WSELPPIPGFPDGLPLFCQLS-----AVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMP 153 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~-----~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~ 153 (289)
..+.+||..+.. ...+.......... ...++ .-++.+++.|+. ...+.+||..+.+-.......
T Consensus 139 ~~i~vwd~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~ 209 (357)
T 3i2n_A 139 GTVKVWDPRQKDDPVANMEPVQGENKRD--CWTVAFGNAYNQEERVVCAGYD-------NGDIKLFDLRNMALRWETNIK 209 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCTTSCCCC--EEEEEEECCCC-CCCEEEEEET-------TSEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEeCCCCCCcceeccccCCCCCCc--eEEEEEEeccCCCCCEEEEEcc-------CCeEEEEECccCceeeecCCC
Confidence 467788887754 23332222211111 01121 135666666653 245888999887743332222
Q ss_pred CCCccceeEEEec---CCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 154 GGRRMLFGCASDG---DRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 154 ~~~~~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
.. ....+..- ++..+++|+.+. .+..||..+.
T Consensus 210 -~~--v~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~ 244 (357)
T 3i2n_A 210 -NG--VCSLEFDRKDISMNKLVATSLEG------KFHVFDMRTQ 244 (357)
T ss_dssp -SC--EEEEEESCSSSSCCEEEEEESTT------EEEEEEEEEE
T ss_pred -Cc--eEEEEcCCCCCCCCEEEEECCCC------eEEEEeCcCC
Confidence 11 22333322 456666665433 4777887653
No 162
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=90.82 E-value=2.7 Score=35.22 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=56.1
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
++.+++.|+.+ ..+.+||..+++-...-... ......++...++.+.+.|+.+. .+..||..+.+
T Consensus 119 ~~~~l~s~s~D-------g~i~vwd~~~~~~~~~l~~h--~~~V~~v~~~~~~~~l~sgs~D~------~i~iwd~~~~~ 183 (410)
T 1vyh_C 119 VFSVMVSASED-------ATIKVWDYETGDFERTLKGH--TDSVQDISFDHSGKLLASCSADM------TIKLWDFQGFE 183 (410)
T ss_dssp SSSEEEEEESS-------SCEEEEETTTCCCCEEECCC--SSCEEEEEECTTSSEEEEEETTS------CCCEEETTSSC
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEecc--CCcEEEEEEcCCCCEEEEEeCCC------eEEEEeCCCCc
Confidence 34566666643 45788998876532211111 11122333333677778877654 37778877653
Q ss_pred eEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 196 WASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
-. ..+.........+.+ +++.++.|+.++ .|..||..++.-
T Consensus 184 ~~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D~--------~i~~wd~~~~~~ 226 (410)
T 1vyh_C 184 CI--RTMHGHDHNVSSVSIMPNGDHIVSASRDK--------TIKMWEVQTGYC 226 (410)
T ss_dssp EE--ECCCCCSSCEEEEEECSSSSEEEEEETTS--------EEEEEETTTCCE
T ss_pred ee--EEEcCCCCCEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCcE
Confidence 22 122211111122222 566777776643 688999987753
No 163
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=90.78 E-value=5.6 Score=32.11 Aligned_cols=135 Identities=8% Similarity=0.011 Sum_probs=68.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCC-C-cc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGG-R-RM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-~-~~ 158 (289)
..+++||+.+++...+. .+. . .......-++++++... ..+++||+.+++.+.+...... . ..
T Consensus 71 ~~i~~~d~~~~~~~~~~-~~~--~---v~~i~~~~dg~l~v~~~---------~gl~~~d~~~g~~~~~~~~~~~~~~~~ 135 (326)
T 2ghs_A 71 RELHELHLASGRKTVHA-LPF--M---GSALAKISDSKQLIASD---------DGLFLRDTATGVLTLHAELESDLPGNR 135 (326)
T ss_dssp TEEEEEETTTTEEEEEE-CSS--C---EEEEEEEETTEEEEEET---------TEEEEEETTTCCEEEEECSSTTCTTEE
T ss_pred CEEEEEECCCCcEEEEE-CCC--c---ceEEEEeCCCeEEEEEC---------CCEEEEECCCCcEEEEeeCCCCCCCCC
Confidence 46888999887655432 221 1 11122345678877531 2489999999888766443211 1 11
Q ss_pred ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CC-EEEEEeeecCCCCCcccceE
Q 048803 159 LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CG-KLLVIGGYSTNAQGRFERHA 236 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~l~~~gG~~~~~~~~~~~~v 236 (289)
....+..-+|++|+.............++.|| +++...+.. ......+.+.. ++ .+|+.... .+.|
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~--------~~~I 203 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK--------VNRL 203 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT--------TCEE
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC--------CCEE
Confidence 23344434778877532111111234678888 455543311 00011122222 45 47776422 1368
Q ss_pred EEEECC
Q 048803 237 EAFDAA 242 (289)
Q Consensus 237 ~~yd~~ 242 (289)
++||..
T Consensus 204 ~~~d~~ 209 (326)
T 2ghs_A 204 MRVPLD 209 (326)
T ss_dssp EEEEBC
T ss_pred EEEEcc
Confidence 888875
No 164
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=90.74 E-value=4.5 Score=32.55 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=65.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+.+||..+++-... +....... ..++.. +++.++.|+.+ ..+.+||..+++-...-... .+ .
T Consensus 54 g~i~vwd~~~~~~~~~--~~~h~~~v---~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~-~~--v 118 (369)
T 3zwl_B 54 SSASVWYSLNGERLGT--LDGHTGTI---WSIDVDCFTKYCVTGSAD-------YSIKLWDVSNGQCVATWKSP-VP--V 118 (369)
T ss_dssp SCEEEEETTTCCEEEE--ECCCSSCE---EEEEECTTSSEEEEEETT-------TEEEEEETTTCCEEEEEECS-SC--E
T ss_pred CEEEEEeCCCchhhhh--hhhcCCcE---EEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcEEEEeecC-CC--e
Confidence 4678888877654322 11111111 122222 35566666532 45888998887643332222 11 2
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc----eEeCCCCCc----ccc---ccceEE--ECCEEEEEeeecC
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE----WASLPDMSR----ERD---ECKAVF--HCGKLLVIGGYST 226 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~----W~~~~~~~~----~~~---~~~~~~--~~~~l~~~gG~~~ 226 (289)
...+..-++..++.++.+.. .....+..||..+.. +......+. ... ....+. -+++.+++|+.+
T Consensus 119 ~~~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d- 196 (369)
T 3zwl_B 119 KRVEFSPCGNYFLAILDNVM-KNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD- 196 (369)
T ss_dssp EEEEECTTSSEEEEEECCBT-TBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-
T ss_pred EEEEEccCCCEEEEecCCcc-CCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-
Confidence 23333335666665544310 112357777776542 221111110 000 111122 256666776654
Q ss_pred CCCCcccceEEEEECCC
Q 048803 227 NAQGRFERHAEAFDAAA 243 (289)
Q Consensus 227 ~~~~~~~~~v~~yd~~~ 243 (289)
..|..||..+
T Consensus 197 -------g~i~i~d~~~ 206 (369)
T 3zwl_B 197 -------GKISKYDVSN 206 (369)
T ss_dssp -------SEEEEEETTT
T ss_pred -------CEEEEEECCC
Confidence 2689999877
No 165
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.67 E-value=3.9 Score=32.91 Aligned_cols=54 Identities=9% Similarity=0.020 Sum_probs=29.7
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
++++++.|+.++ .|.+||..+.+-. .... .............+++.++.|+.++
T Consensus 284 ~~~~l~s~~~dg--------~i~iwd~~~~~~~--~~~~-~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 284 VHGTLATVGSDG--------RFSFWDKDARTKL--KTSE-QLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp TTCCEEEEETTS--------CEEEEETTTTEEE--EECC-CCSSCEEEEEECTTSSCEEEEECCC
T ss_pred CCCEEEEEccCC--------eEEEEECCCCcEE--EEec-CCCCCceEEEECCCCCeEEEEeccc
Confidence 577777777653 5899998876432 2211 1111111123345777777776554
No 166
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=90.62 E-value=11 Score=35.04 Aligned_cols=133 Identities=10% Similarity=0.028 Sum_probs=76.1
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCC--CCCCCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGA--DMPGGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....|+++++....-+.+. .+. . ..++++.- ++.||+.--. ....|+++++
T Consensus 481 ~~~~LY~tD~-------~~~~I~v~~ldG~~~~~l~~~~l~-~---P~gIaVDp~~g~LYwtD~g-----~~~~I~~~~~ 544 (791)
T 3m0c_C 481 IHSNIYWTDS-------VLGTVSVADTKGVKRKTLFRENGS-K---PRAIVVDPVHGFMYWTDWG-----TPAKIKKGGL 544 (791)
T ss_dssp TTTEEEEEET-------TTTEEEEEETTSSSEEEEEECTTC-C---EEEEEEETTTTEEEEEECS-----SSCEEEEEET
T ss_pred cCCcEEEEec-------CCCeEEEEeCCCCeEEEEEeCCCC-C---cceEEEecCCCCEEEecCC-----CCCeEEEEec
Confidence 4679999853 2467889998766544442 222 1 24555532 6899998411 1145888888
Q ss_pred CCCceEeCC--CCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASLP--DMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~~--~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
....=..+. .+..| .++++ .+++||+.-.. .+.|+++|+....=..+... .....++ .++++.
T Consensus 545 dG~~~~~lv~~~l~~P---~GLavD~~~~~LYwaD~~--------~~~I~~~d~dG~~~~~v~~~-~~~l~~P-~glav~ 611 (791)
T 3m0c_C 545 NGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILED-EKRLAHP-FSLAVF 611 (791)
T ss_dssp TSCCEEEEECSSCSCE---EEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEEEC-TTTTSSE-EEEEEE
T ss_pred CCCceEEEEeCCCCCc---eEEEEecCCCeEEEEeCC--------CCcEEEEecCCCceEEEecC-CCccCCC-CEEEEe
Confidence 755433332 22222 12333 36899998532 24799999876543333221 0111222 367778
Q ss_pred CCeEEEEeC
Q 048803 268 SNDLYMCRE 276 (289)
Q Consensus 268 ~~~ly~~GG 276 (289)
+++||+..-
T Consensus 612 ~~~lYwtD~ 620 (791)
T 3m0c_C 612 EDKVFWTDI 620 (791)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEEC
Confidence 999999864
No 167
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=90.60 E-value=2 Score=34.77 Aligned_cols=94 Identities=6% Similarity=-0.076 Sum_probs=47.0
Q ss_pred CEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE---CCEEEEEeeecCCCCCcccceEEEEECCCC
Q 048803 168 RTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH---CGKLLVIGGYSTNAQGRFERHAEAFDAAAQ 244 (289)
Q Consensus 168 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~ 244 (289)
+.+++.|+.+. .+..||..+.+-... +.........+.+ ++++++.|+.++ .|.+||..++
T Consensus 85 ~~~l~~~~~dg------~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSRG------IIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDH--------ALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETTC------EEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTTT
T ss_pred CCEEEEecCCC------EEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCC--------eEEEEEeecC
Confidence 56777776543 488888887642211 1111111122222 567777877643 5899999876
Q ss_pred ceeecccccccCCCCCCceee-eeCCeEEEEeCce
Q 048803 245 QWGPVEEDFMETATCPRSCAG-VDSNDLYMCREGD 278 (289)
Q Consensus 245 ~W~~~~~~~~~~~~~~~~~~~-~~~~~ly~~GG~~ 278 (289)
+-...-...... .....+++ ..+++.++.|+.+
T Consensus 149 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 149 TLVAIFGGVEGH-RDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp EEEEEECSTTSC-SSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEecccccc-cCceeEEEECCCCCEEEEecCC
Confidence 543322100011 11111222 3456677777654
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=90.45 E-value=9.3 Score=34.11 Aligned_cols=153 Identities=12% Similarity=-0.013 Sum_probs=80.5
Q ss_pred eeEEEEECCC------CCeEeCC-CCCCCCCCCCceeEEEEeCC-EEEEEeCcCCCCcccccceEEEEcc-CC---eEEe
Q 048803 81 YRITVLELGS------GEWSELP-PIPGFPDGLPLFCQLSAVGP-ELVVIGGLDLTTWEASSSVFVFNII-SA---TWRR 148 (289)
Q Consensus 81 ~~~~~~d~~~------~~W~~~~-~~~~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~yd~~-t~---~W~~ 148 (289)
..++++|..+ +.-+.+. .-+..... ...+-++ .|++.........-...+++++|.. ++ +.+.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHRFVTG-----PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSSEECC-----CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCCcccC-----ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 5788889887 6655554 21111110 1222344 4544432211100023579999998 56 4444
Q ss_pred CCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCcccc-------ccceEEE-CCEEEE
Q 048803 149 GADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERD-------ECKAVFH-CGKLLV 220 (289)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~-------~~~~~~~-~~~l~~ 220 (289)
+..-. .......+..-+|++|+.+..+. ...++.+|+.++++..+.+...... ....+.. ++++++
T Consensus 236 l~~~~--~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 236 LLGGP--EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEET--TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred eCCCC--CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 43211 11122233323777877765432 2368999998888987754322110 1122333 677777
Q ss_pred EeeecCCCCCcccceEEEEECCCCceeeccc
Q 048803 221 IGGYSTNAQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 221 ~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
.+.. +. ..++.+|..+++.+.+..
T Consensus 310 ~~~~-~~------~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 310 VHGK-GA------AVLGILDPESGELVDAAG 333 (662)
T ss_dssp EEBS-SS------CEEEEEETTTTEEEECCS
T ss_pred EEEc-Cc------cEEEEEECCCCcEEEecC
Confidence 7654 22 368888988887766653
No 169
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.31 E-value=6.2 Score=31.82 Aligned_cols=158 Identities=13% Similarity=0.085 Sum_probs=81.8
Q ss_pred eeEEEEECCCCCeEeCC-CCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccC----CeEEe-CC-C
Q 048803 81 YRITVLELGSGEWSELP-PIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIIS----ATWRR-GA-D 151 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~-~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t----~~W~~-~~-~ 151 (289)
..+..+|+.+.....+. .+..+ .+++.. ++.||+... ....++++++.+ ..-+. ++ .
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p-------~g~~~d~~~~~ly~~D~-------~~~~I~~~~~~g~~~~~~~~~~~~~~ 75 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNV-------VALDTEVASNRIYWSDL-------SQRMICSTQLDRAHGVSSYDTVISRD 75 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSE-------EEEEEETTTTEEEEEET-------TTTEEEEEEC--------CEEEECSS
T ss_pred CeEEEEECCCcceEehhcCCCce-------EEEEEEeCCCEEEEEEC-------CCCcEEEEECCCCCCCcccEEEEeCC
Confidence 46778888887665442 22111 133333 578999854 245688898876 22222 22 2
Q ss_pred CCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCC--CCCccccccceEE--ECCEEEEEeeecC
Q 048803 152 MPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLP--DMSRERDECKAVF--HCGKLLVIGGYST 226 (289)
Q Consensus 152 ~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~--~~~~l~~~gG~~~ 226 (289)
+. ...+.++. .++.||+.-.. ...+..+|+....-..+. .+..|+ ..++ .++.||+.....
T Consensus 76 ~~----~p~glavd~~~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d~~~- 141 (316)
T 1ijq_A 76 IQ----APDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT- 141 (316)
T ss_dssp CS----CCCEEEEETTTTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECSS-
T ss_pred CC----CcCEEEEeecCCeEEEEECC------CCEEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEccCC-
Confidence 22 12455554 37899998432 245888988765333221 222232 3333 368899875211
Q ss_pred CCCCcccceEEEEECCCCceeecccccccCCCCCCceeee--eCCeEEEEeC
Q 048803 227 NAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV--DSNDLYMCRE 276 (289)
Q Consensus 227 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~ly~~GG 276 (289)
...|++++++...=+.+... ....+. +++. .+++||+...
T Consensus 142 ------~~~I~~~~~dG~~~~~~~~~---~~~~P~-gla~d~~~~~lY~~D~ 183 (316)
T 1ijq_A 142 ------PAKIKKGGLNGVDIYSLVTE---NIQWPN-GITLDLLSGRLYWVDS 183 (316)
T ss_dssp ------SCEEEEEETTSCCEEEEECS---SCSCEE-EEEEETTTTEEEEEET
T ss_pred ------CCeEEEEcCCCCCeEEEEEC---CCCCce-EEEEeccCCEEEEEEC
Confidence 13689998865443333211 111222 3443 3678888864
No 170
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.29 E-value=7.4 Score=35.65 Aligned_cols=109 Identities=10% Similarity=-0.054 Sum_probs=62.2
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCC-ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGR-RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++.|+++||.. .-+.+||+.+++++....-.... ....+.....+|.|++.. . .-+..||++++
T Consensus 482 ~g~lWi~~~t~-------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~-------~Gl~~~~~~~~ 546 (758)
T 3ott_A 482 EGNVWVLLYNN-------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H-------GGVMRINPKDE 546 (758)
T ss_dssp TSCEEEEETTC-------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T-------TEEEEECC--C
T ss_pred CCCEEEEccCC-------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c-------CceEEEecCCC
Confidence 46788866532 34889999999988764211011 112223332367788642 1 13899999988
Q ss_pred ceEeCC--CCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecc
Q 048803 195 EWASLP--DMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVE 250 (289)
Q Consensus 195 ~W~~~~--~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 250 (289)
++.... .++.. .-.+.+.-+|+|++... +.+.+||+++.+.....
T Consensus 547 ~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t~----------~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 547 SQQSISFGSFSNN-EILSMTCVKNSIWVSTT----------NGLWIIDRKTMDARQQN 593 (758)
T ss_dssp CCCBCCCCC---C-CEEEEEEETTEEEEEES----------SCEEEEETTTCCEEEC-
T ss_pred ceEEecccCCCcc-ceEEEEECCCCEEEECC----------CCeEEEcCCCceeEEec
Confidence 876552 23321 11222334788888652 25899999998877653
No 171
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.21 E-value=6.6 Score=32.12 Aligned_cols=158 Identities=8% Similarity=-0.035 Sum_probs=79.8
Q ss_pred ceeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-e-CC-EEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCC
Q 048803 80 VYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-V-GP-ELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGR 156 (289)
Q Consensus 80 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~-~~-~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~ 156 (289)
...++.+|..+++...+...+ .. ...... - ++ .|+++.. .... .....++++|..+.+++.+.... ..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~--~~----~~~~~~sp~dg~~l~~~~~-~~~~-~~~~~l~~~d~~~~~~~~l~~~~-~~ 237 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT--AW----LGHPIYRPFDDSTVGFCHE-GPHD-LVDARMWLVNEDGSNVRKIKEHA-EG 237 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES--SC----EEEEEEETTEEEEEEEEEC-SCSS-SCSCCCEEEETTSCCCEESSCCC-TT
T ss_pred cceEEEEECCCCcEEeeccCC--cc----cccceECCCCCCEEEEEec-CCCC-CCCceEEEEECCCCceeEeeccC-CC
Confidence 367899999988876654211 11 012222 2 23 3555442 1111 12367999999888877765521 11
Q ss_pred ccceeEEEecCCE-EEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CCEEEEEeeecCC----C--
Q 048803 157 RMLFGCASDGDRT-VYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CGKLLVIGGYSTN----A-- 228 (289)
Q Consensus 157 ~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~----~-- 228 (289)
......+..-+++ |++....... ....++.+|+.+++...+...+.. . ....- +|+++++.+.... .
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~~--~-~~~s~~dg~~l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQ--TDRVIYKANPETLENEEVMVMPPC--S-HLMSNFDGSLMVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTT--CCEEEEEECTTTCCEEEEEECCSE--E-EEEECSSSSEEEEEECCC--------
T ss_pred ccccceEECCCCCEEEEEecCCCC--ccceEEEEECCCCCeEEeeeCCCC--C-CCccCCCCceEEEecCCcceeecccc
Confidence 1122223323554 4444221111 112489999998877665443321 1 22233 7776666542100 0
Q ss_pred --CCcccceEEEEECCCCceeeccc
Q 048803 229 --QGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 229 --~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
...-...++.+|+.+++...+..
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSAQKLCK 337 (396)
T ss_dssp --CCCCCCEEEEEETTTTBCCEEEE
T ss_pred ccccCCCCcEEEEecccCceEEccC
Confidence 00012468999998887766544
No 172
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=90.18 E-value=6.1 Score=31.54 Aligned_cols=104 Identities=9% Similarity=0.101 Sum_probs=53.1
Q ss_pred CCE-EEEEeCcCCCCcccccceEEEEc-cCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC
Q 048803 116 GPE-LVVIGGLDLTTWEASSSVFVFNI-ISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR 193 (289)
Q Consensus 116 ~~~-lyv~GG~~~~~~~~~~~~~~yd~-~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 193 (289)
++. .++.|+.+ ..+.+||. .+++-..+....+.. ....++..- +.+++.|+.+. .+..||+.+
T Consensus 67 ~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~-~v~~l~~~~-~~~l~s~~~d~------~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-------GEILKVDLIGSPSFQALTNNEANL-GICRICKYG-DDKLIAASWDG------LIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETT-------SCEEEECSSSSSSEEECBSCCCCS-CEEEEEEET-TTEEEEEETTS------EEEEECHHH
T ss_pred CCCcEEEEEcCC-------CeEEEEEeccCCceEeccccCCCC-ceEEEEeCC-CCEEEEEcCCC------eEEEEcccc
Confidence 556 66666633 45889999 888776665411111 122233322 55666665443 477888764
Q ss_pred Cc-------eEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCC
Q 048803 194 DE-------WASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAA 243 (289)
Q Consensus 194 ~~-------W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~ 243 (289)
.. ...+..+.....-.+++...+. +++|+.+ ..+..||..+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d--------~~i~i~d~~~ 179 (342)
T 1yfq_A 132 YGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN--------SQVQWFRLPL 179 (342)
T ss_dssp HTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST--------TEEEEEESSC
T ss_pred cccccccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC--------CeEEEEECCc
Confidence 00 2222223211111222333445 5555443 3689999887
No 173
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.15 E-value=3 Score=33.57 Aligned_cols=138 Identities=11% Similarity=0.010 Sum_probs=68.4
Q ss_pred eeEEEEECCCCCeEeCCC-CCCCCCCCCceeEEEEe-C-CEEEEEeCcCCCCcccccceEEEEccC---CeEEeCCCCCC
Q 048803 81 YRITVLELGSGEWSELPP-IPGFPDGLPLFCQLSAV-G-PELVVIGGLDLTTWEASSSVFVFNIIS---ATWRRGADMPG 154 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~-~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~yd~~t---~~W~~~~~~~~ 154 (289)
..+++||+.+++...+.. +..| . .++.. + +.||+.-. ....+++|+..+ .+.+.+..++.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p-----~--gia~~~dg~~lyv~d~-------~~~~I~~~~~~~~~~~~~~~~~~~~g 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVP-----G--GAEVSADSSFVLVAEF-------LSHQIVKYWLEGPKKGTAEVLVKIPN 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCC-----C--EEEECTTSSEEEEEEG-------GGTEEEEEESSSTTTTCEEEEEECSS
T ss_pred ceEEEEeCCCCEEEEeccCCccC-----c--ceEECCCCCEEEEEeC-------CCCeEEEEECCCCcCCccceEEeCCC
Confidence 457777777665443211 1111 1 33333 2 35887632 235688898875 23433333331
Q ss_pred CCccceeEEEecCCEEEEEcCCCCCC----cccCceEEEEcCCCceEeCCCCCc--cccccceEEECCEEEEEeeecCCC
Q 048803 155 GRRMLFGCASDGDRTVYVAGGHDEDK----NALKSAMAYDVARDEWASLPDMSR--ERDECKAVFHCGKLLVIGGYSTNA 228 (289)
Q Consensus 155 ~~~~~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~~yd~~~~~W~~~~~~~~--~~~~~~~~~~~~~l~~~gG~~~~~ 228 (289)
..+.+..-+|.|||........ .....+.+||+....-..+..... .....+++.-+++||+.....
T Consensus 231 ----P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~--- 303 (322)
T 2fp8_A 231 ----PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFH--- 303 (322)
T ss_dssp ----EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSC---
T ss_pred ----CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCC---
Confidence 3445554578899875321000 012358899987544333322110 111222334588999875332
Q ss_pred CCcccceEEEEECCCC
Q 048803 229 QGRFERHAEAFDAAAQ 244 (289)
Q Consensus 229 ~~~~~~~v~~yd~~~~ 244 (289)
+.|.+|++..+
T Consensus 304 -----~~i~~~~~~~~ 314 (322)
T 2fp8_A 304 -----GSVGILVYDKK 314 (322)
T ss_dssp -----SEEEEEEC---
T ss_pred -----CceEEEecccc
Confidence 36888887644
No 174
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=90.14 E-value=9.2 Score=33.58 Aligned_cols=56 Identities=2% Similarity=0.050 Sum_probs=27.7
Q ss_pred ceEEEEcCCCceEeCCCCCccccccceEE-ECCEEEEEeeecCCCCCcccceEEEEECCCCcee
Q 048803 185 SAMAYDVARDEWASLPDMSRERDECKAVF-HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWG 247 (289)
Q Consensus 185 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~ 247 (289)
.+..+|..+..-..+..++..+..+..+. -+++.+++.... .+.|.++|..+++-.
T Consensus 303 ~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~-------~~~v~v~D~~tg~l~ 359 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN-------SNKVAVIDSKDRRLS 359 (543)
T ss_dssp EEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG-------GTEEEEEETTTTEEE
T ss_pred eEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC-------CCeEEEEECCCCeEE
Confidence 58888887643111111111222222332 356644443332 146888999988643
No 175
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.13 E-value=6.1 Score=31.48 Aligned_cols=168 Identities=8% Similarity=0.026 Sum_probs=76.6
Q ss_pred eeEEEEECCCCCe-E-eCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEW-S-ELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W-~-~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..++++|+.+++- . .+..-..+... .+....+..+| ++.... ....+.+||..+++-...-+....
T Consensus 62 ~~i~~~d~~~~~~~~~~~~~~~~~~~~----~~~s~dg~~l~-~~~~~~----~~~~i~v~d~~~~~~~~~~~~~~~--- 129 (331)
T 3u4y_A 62 QTLVQIETQLEPPKVVAIQEGQSSMAD----VDITPDDQFAV-TVTGLN----HPFNMQSYSFLKNKFISTIPIPYD--- 129 (331)
T ss_dssp CEEEEEECSSSSCEEEEEEECSSCCCC----EEECTTSSEEE-ECCCSS----SSCEEEEEETTTTEEEEEEECCTT---
T ss_pred CeEEEEECCCCceeEEecccCCCCccc----eEECCCCCEEE-EecCCC----CcccEEEEECCCCCeEEEEECCCC---
Confidence 4788999988764 2 22211111110 11112234566 432110 123799999998876443222211
Q ss_pred ceeEEEecCC-EEEEEcCCCCCCcccCc-eEEEEcCCCc-eEeC--CCCCccccccceEE-ECCE-EEEEeeecCCCCCc
Q 048803 159 LFGCASDGDR-TVYVAGGHDEDKNALKS-AMAYDVARDE-WASL--PDMSRERDECKAVF-HCGK-LLVIGGYSTNAQGR 231 (289)
Q Consensus 159 ~~~~~~~~~~-~iyv~GG~~~~~~~~~~-~~~yd~~~~~-W~~~--~~~~~~~~~~~~~~-~~~~-l~~~gG~~~~~~~~ 231 (289)
..+.+..-++ .+|+.+... .. +..|+...+. -... ..++........+. -+|+ +|+.+..+
T Consensus 130 ~~~~~~spdg~~l~~~~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~------ 197 (331)
T 3u4y_A 130 AVGIAISPNGNGLILIDRSS------ANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG------ 197 (331)
T ss_dssp EEEEEECTTSSCEEEEEETT------TTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT------
T ss_pred ccceEECCCCCEEEEEecCC------CceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC------
Confidence 2344443355 477775422 23 6667665431 1110 00011111112222 2554 77665322
Q ss_pred ccceEEEEECCCCce-eecccccccCCCCCCceeeeeCCe-EEEEeC
Q 048803 232 FERHAEAFDAAAQQW-GPVEEDFMETATCPRSCAGVDSND-LYMCRE 276 (289)
Q Consensus 232 ~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~~~~-ly~~GG 276 (289)
+.+.+||+.+++. ..+... +....+....+..+++ ||+...
T Consensus 198 --~~v~v~d~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 198 --NSIGILETQNPENITLLNAV--GTNNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp --TEEEEEECSSTTSCEEEEEE--ECSSCCCCEEECTTSSEEEEECS
T ss_pred --CeEEEEECCCCcccceeeec--cCCCCCceEEECCCCCEEEEEEc
Confidence 3689999987765 112221 1112233233444566 666654
No 176
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=90.13 E-value=7.4 Score=32.45 Aligned_cols=161 Identities=10% Similarity=0.023 Sum_probs=84.7
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE--eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA--VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+..+++.......+..-.. .. .+++. .++.||+.-- ....++++++.....+.+.... ...
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~--~~----~gl~~d~~~~~ly~~D~-------~~~~I~r~~~~g~~~~~~~~~~--~~~ 160 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLE--NA----IALDFHHRRELVFWSDV-------TLDRILRANLNGSNVEEVVSTG--LES 160 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCS--CE----EEEEEETTTTEEEEEET-------TTTEEEEEETTSCCEEEEECSS--CSC
T ss_pred ccceeeccCCCcEEEEecCCC--cc----EEEEEecCCCeEEEEeC-------CCCcEEEEecCCCCcEEEEeCC--CCC
Confidence 456677777665544332111 11 13333 3578998843 2467899999877655542211 111
Q ss_pred ceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEcCCCceEeC--CCCCccccccceEE--ECCEEEEEeeecCCCCCccc
Q 048803 159 LFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDVARDEWASL--PDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFE 233 (289)
Q Consensus 159 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~ 233 (289)
..+.++. .++.||+.-.. ...++.+++....-..+ ..+..|+ ..++ .++.||+.-... .
T Consensus 161 p~glavd~~~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td~~~-------~ 224 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN-------T 224 (386)
T ss_dssp CCCEEEETTTTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEECSS-------S
T ss_pred ccEEEEEeCCCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCCCc---EEEEEcCCCeEEEeccCC-------C
Confidence 2345554 37899998432 23588888775433322 1222232 2333 268898875321 1
Q ss_pred ceEEEEECCCCceeecccccccCCCCCCceeee--eCCeEEEEeC
Q 048803 234 RHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV--DSNDLYMCRE 276 (289)
Q Consensus 234 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~ly~~GG 276 (289)
..|++++++...-..+... ....+ .+++. .+++||+...
T Consensus 225 ~~I~r~~~dG~~~~~~~~~---~~~~P-nGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 225 PRIEASSMDGSGRRIIADT---HLFWP-NGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp CEEEEEETTSCSCEEEECS---SCSCE-EEEEEEGGGTEEEEEET
T ss_pred CEEEEEeCCCCCcEEEEEC---CCCCe-eeEEEeCCCCEEEEEEC
Confidence 3689999876543333211 11112 23443 4788888854
No 177
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.10 E-value=2.6 Score=34.52 Aligned_cols=96 Identities=10% Similarity=0.024 Sum_probs=49.0
Q ss_pred cceEEEEccCCeEEeCC--CCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccc-cc
Q 048803 134 SSVFVFNIISATWRRGA--DMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDE-CK 210 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~ 210 (289)
..+.+||..+++-.... .+........+++..-+++..+.|+.+. .+..+|+++++=.. .+. .+.. ..
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~------~i~iwd~~~~~~~~--~~~-~h~~~V~ 173 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI------CIKVWDLAQQVVLS--SYR-AHAAQVT 173 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEE--EEC-CCSSCEE
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC------eEEEEECCCCcEEE--EEc-CcCCceE
Confidence 45788888776421110 0100011122333323777777777554 38889988764321 111 1111 11
Q ss_pred eEEE--C-CEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 211 AVFH--C-GKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 211 ~~~~--~-~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
.+.+ + ..+++.|+.++ .|.+||..+.+-
T Consensus 174 ~~~~~~~~~~~l~s~s~D~--------~v~iwd~~~~~~ 204 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDN--------RILLWDTRCPKP 204 (344)
T ss_dssp EEEECSSCTTEEEEEETTS--------CEEEEETTSSSC
T ss_pred EEEecCCCCCceeeecccc--------ccccccccccce
Confidence 1222 3 35777777653 588899987653
No 178
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=90.08 E-value=2.1 Score=36.21 Aligned_cols=106 Identities=10% Similarity=0.126 Sum_probs=51.2
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCC--------eEEeCCCCCCCCccceeEEEecCCE-EEEEcCCCCCCcccCceE
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISA--------TWRRGADMPGGRRMLFGCASDGDRT-VYVAGGHDEDKNALKSAM 187 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~--------~W~~~~~~~~~~~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~ 187 (289)
+.+++.|+.+ ..+.+||..+. ..+.+..+........+++..-++. +++.|+.+. .+.
T Consensus 141 ~~~lat~~~d-------g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg------~i~ 207 (430)
T 2xyi_A 141 ACVIATKTPS-------SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH------TIC 207 (430)
T ss_dssp EEEEEEECSS-------SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS------CEE
T ss_pred CcEEEEECCC-------CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC------eEE
Confidence 4567776643 35788887652 1211111110111122333322444 677776544 388
Q ss_pred EEEcCCC---ceEe--CCCCCcccc-ccceEEE---CCEEEEEeeecCCCCCcccceEEEEECCCC
Q 048803 188 AYDVARD---EWAS--LPDMSRERD-ECKAVFH---CGKLLVIGGYSTNAQGRFERHAEAFDAAAQ 244 (289)
Q Consensus 188 ~yd~~~~---~W~~--~~~~~~~~~-~~~~~~~---~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~ 244 (289)
.||+.+. .+.. ...+. .+. ....+.+ ++.+++.++.+ +.|.+||..+.
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~d--------g~i~i~d~~~~ 264 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFT-GHTAVVEDVAWHLLHESLFGSVADD--------QKLMIWDTRNN 264 (430)
T ss_dssp EEETTSCCBGGGEEECSEEEC-CCSSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTCS
T ss_pred EEeCCCCCCCCceeccceeec-CCCCCEeeeEEeCCCCCEEEEEeCC--------CeEEEEECCCC
Confidence 8888763 1211 11111 111 1112222 56677777654 36899999875
No 179
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.95 E-value=5.6 Score=35.57 Aligned_cols=122 Identities=14% Similarity=0.178 Sum_probs=68.9
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEc-cCCe--EEeCCCCCCCCc-------cceeEEEe-cCCE----EEEEcC
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNI-ISAT--WRRGADMPGGRR-------MLFGCASD-GDRT----VYVAGG 175 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~~~-------~~~~~~~~-~~~~----iyv~GG 175 (289)
+-++.++.||+.+.. ...++.+|. .|++ |+.-........ ...+.++. .+++ ||+...
T Consensus 57 tP~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp CCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred ccEEECCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 345679999998541 345888999 7775 887544331100 01122321 3666 887532
Q ss_pred CCCCCcccCceEEEEcCCCc--eEeC-CCCCcc-ccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc--eeec
Q 048803 176 HDEDKNALKSAMAYDVARDE--WASL-PDMSRE-RDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPV 249 (289)
Q Consensus 176 ~~~~~~~~~~~~~yd~~~~~--W~~~-~~~~~~-~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 249 (289)
...+..+|.+|++ |+.- ...... ......++.+++||+..+.... .....|..||.++++ |+.-
T Consensus 130 -------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~---g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 130 -------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL---GVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp -------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG---TCCCEEEEEETTTCCEEEEEE
T ss_pred -------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc---CCCCeEEEEECCCCcEEEEEc
Confidence 1258999998874 9743 221111 1123345678988875432110 012479999998875 8654
No 180
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=89.85 E-value=5.2 Score=31.36 Aligned_cols=109 Identities=8% Similarity=0.148 Sum_probs=55.2
Q ss_pred EeCCEEEEEeCcCCCCcccccceEEEEccCCeEE-eCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcC
Q 048803 114 AVGPELVVIGGLDLTTWEASSSVFVFNIISATWR-RGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVA 192 (289)
Q Consensus 114 ~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 192 (289)
.-++. ++.|+. ...+.+||..+.+-. .+.... ......+..-+++ ++.|+.+. .+..||..
T Consensus 193 ~~~~~-~~~~~~-------dg~i~i~d~~~~~~~~~~~~~~---~~i~~~~~~~~~~-l~~~~~dg------~v~iwd~~ 254 (313)
T 3odt_A 193 VDDGH-FISCSN-------DGLIKLVDMHTGDVLRTYEGHE---SFVYCIKLLPNGD-IVSCGEDR------TVRIWSKE 254 (313)
T ss_dssp EETTE-EEEEET-------TSEEEEEETTTCCEEEEEECCS---SCEEEEEECTTSC-EEEEETTS------EEEEECTT
T ss_pred cCCCe-EEEccC-------CCeEEEEECCchhhhhhhhcCC---ceEEEEEEecCCC-EEEEecCC------EEEEEECC
Confidence 34566 555553 345888998876532 222111 1122333323554 44554432 48899988
Q ss_pred CCceEeCCCCCccccccceE--EECCEEEEEeeecCCCCCcccceEEEEECCCCceeeccc
Q 048803 193 RDEWASLPDMSRERDECKAV--FHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 193 ~~~W~~~~~~~~~~~~~~~~--~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
+.+-...-..+.. ....+ .-+++ ++.++.+ +.+..||..++++.....
T Consensus 255 ~~~~~~~~~~~~~--~i~~~~~~~~~~-~~~~~~d--------g~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 255 NGSLKQVITLPAI--SIWSVDCMSNGD-IIVGSSD--------NLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp TCCEEEEEECSSS--CEEEEEECTTSC-EEEEETT--------SCEEEEESCGGGCCC---
T ss_pred CCceeEEEeccCc--eEEEEEEccCCC-EEEEeCC--------CcEEEEeCCCCceeehhh
Confidence 8754322111111 11112 22566 4456554 268999999888765543
No 181
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.81 E-value=6.2 Score=31.13 Aligned_cols=145 Identities=17% Similarity=0.113 Sum_probs=69.4
Q ss_pred eeEEEEECCCCCeEeC-CCCCCCCCCCCceeEEEE-eCCEEEEEeCcCC--------CCcccccceEEEEccCCeEEeCC
Q 048803 81 YRITVLELGSGEWSEL-PPIPGFPDGLPLFCQLSA-VGPELVVIGGLDL--------TTWEASSSVFVFNIISATWRRGA 150 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~-~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~--------~~~~~~~~~~~yd~~t~~W~~~~ 150 (289)
..+.+||+. ++...+ ............ ..++. -++.+|+...... ........++++|+. ++.+.+.
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~-~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGC-NDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCC-CEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCC-cCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 367889998 776655 322211100000 12333 3568888754321 000123578899886 5554432
Q ss_pred CCCCCCccceeEEEe----cCC-EEEEEcCCCCCCcccCceEEEEcC-CCceEe---CCCCCcc--ccccceEE-ECCEE
Q 048803 151 DMPGGRRMLFGCASD----GDR-TVYVAGGHDEDKNALKSAMAYDVA-RDEWAS---LPDMSRE--RDECKAVF-HCGKL 218 (289)
Q Consensus 151 ~~~~~~~~~~~~~~~----~~~-~iyv~GG~~~~~~~~~~~~~yd~~-~~~W~~---~~~~~~~--~~~~~~~~-~~~~l 218 (289)
... ....+.+.. -++ .+|+..... ..+.+||+. +++... ...++.. .....++. -+|++
T Consensus 169 ~~~---~~~~~i~~~~~~d~dg~~l~v~~~~~------~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 169 TAF---QFPNGIAVRHMNDGRPYQLIVAETPT------KKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp EEE---SSEEEEEEEECTTSCEEEEEEEETTT------TEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE
T ss_pred cCC---CCcceEEEecccCCCCCEEEEEECCC------CeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE
Confidence 111 111334443 345 577764322 358888876 443321 1111111 11112222 26788
Q ss_pred EEEeeecCCCCCcccceEEEEECCCCc
Q 048803 219 LVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 219 ~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
|+..... +.|.+||+++++
T Consensus 240 ~v~~~~~--------~~i~~~d~~~g~ 258 (314)
T 1pjx_A 240 LVANWGS--------SHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEETT--------TEEEEECTTCBS
T ss_pred EEEEcCC--------CEEEEEcCCCCc
Confidence 8875321 368999998554
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=89.75 E-value=9.7 Score=33.29 Aligned_cols=134 Identities=12% Similarity=0.092 Sum_probs=68.6
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||..+++... ..+...... ...+.+ ++++++.|+.+ ..+.+||..+.+-...-.-.+ ...
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~~~~~----v~~~~~s~~g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~h-~~~ 533 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTPLRAK----PSYISISPSETYIAAGDVM-------GKILLYDLQSREVKTSRWAFR-TSK 533 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSCCSSC----EEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEECCSCCC-SSC
T ss_pred CeEEEEECCCccccc-cccCCccCc----eEEEEECCCCCEEEEcCCC-------CeEEEeeCCCCcceeEeecCC-CCc
Confidence 567888888765532 222221111 122233 56677777643 458899998876433211101 111
Q ss_pred ceeEEEec----------CCEEEEEcCCCCCCcccCceEEEEcCCCc--eEeCCCCCccccccceEEECCEEEEEeeecC
Q 048803 159 LFGCASDG----------DRTVYVAGGHDEDKNALKSAMAYDVARDE--WASLPDMSRERDECKAVFHCGKLLVIGGYST 226 (289)
Q Consensus 159 ~~~~~~~~----------~~~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~ 226 (289)
...++..- ++.+.+.|+.+. .+..||..+.. ...+..-..+. ......-+++ ++.+|.++
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~~h~~~v-~~l~~s~~~~-l~s~~~d~ 605 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSLDT------NIFIYSVKRPMKIIKALNAHKDGV-NNLLWETPST-LVSSGADA 605 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEETTS------CEEEEESSCTTCCEEETTSSTTCE-EEEEEEETTE-EEEEETTS
T ss_pred eeEEEEcCccccccccccCCCEEEEEcCCC------cEEEEECCCCceechhhhcCccce-EEEEEcCCCC-eEEecCCc
Confidence 22333333 577777776544 48999998752 22221111111 1112234788 77776653
Q ss_pred CCCCcccceEEEEECCC
Q 048803 227 NAQGRFERHAEAFDAAA 243 (289)
Q Consensus 227 ~~~~~~~~~v~~yd~~~ 243 (289)
.|..||.++
T Consensus 606 --------~v~iw~~~~ 614 (615)
T 1pgu_A 606 --------CIKRWNVVL 614 (615)
T ss_dssp --------CEEEEEEC-
T ss_pred --------eEEEEeeec
Confidence 477777654
No 183
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=89.60 E-value=4.1 Score=32.13 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=34.2
Q ss_pred cceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 134 SSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
..+.+||..+++-...-.+......-.+++..-+++..+.|+.+. .+..+|.++++
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg------~v~iw~~~~~~ 100 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA------EVQLWDVQQQK 100 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS------EEEEEETTTTE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC------cEEEeecCCce
Confidence 458899999987654433331122223344334777888877654 48888988775
No 184
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=89.34 E-value=2.6 Score=33.61 Aligned_cols=143 Identities=15% Similarity=0.144 Sum_probs=67.8
Q ss_pred eeEEEEECCCCCeEeCCCCCCCC-CCCCceeEEEEeC-CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCC--
Q 048803 81 YRITVLELGSGEWSELPPIPGFP-DGLPLFCQLSAVG-PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGR-- 156 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~-~~~~~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~-- 156 (289)
..+.++|+.+.+-...-.++... ... .....-+ ..+|+.+.. ...+.++|..+++-...-..+...
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~---~~~~s~dg~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPM---VPMVAPGGRIAYATVNK-------SESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCC---CEEECTTSSEEEEEETT-------TTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCcc---ceEEcCCCCEEEEEeCC-------CCeEEEEECCCCCeEeeEEcCCcccc
Confidence 57889999887654322232210 011 0222223 467777642 356899999887743321111100
Q ss_pred -ccceeEEEecCC-EEEEEcCCC---CCCc--ccCceEEEEcCCCceEeCCCCCccccccceEE-ECCE-EEEEeeecCC
Q 048803 157 -RMLFGCASDGDR-TVYVAGGHD---EDKN--ALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCGK-LLVIGGYSTN 227 (289)
Q Consensus 157 -~~~~~~~~~~~~-~iyv~GG~~---~~~~--~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~-l~~~gG~~~~ 227 (289)
......+..-++ .+|+..... .... ....+..||+.+.+....-+.. ......+. -+++ ||+..
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~----- 153 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG----- 153 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES-----
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC-----
Confidence 011233433345 677763110 0000 1246899999887543221111 11122222 2444 55551
Q ss_pred CCCcccceEEEEECCCCce
Q 048803 228 AQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 228 ~~~~~~~~v~~yd~~~~~W 246 (289)
+.+.+||+.+++-
T Consensus 154 ------~~i~~~d~~~~~~ 166 (337)
T 1pby_B 154 ------RDLHVMDPEAGTL 166 (337)
T ss_dssp ------SSEEEEETTTTEE
T ss_pred ------CeEEEEECCCCcE
Confidence 2478888877653
No 185
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=89.34 E-value=3.5 Score=32.87 Aligned_cols=126 Identities=17% Similarity=0.174 Sum_probs=63.4
Q ss_pred ccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCCCceE---eCCCCCccccc
Q 048803 133 SSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVARDEWA---SLPDMSRERDE 208 (289)
Q Consensus 133 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~---~~~~~~~~~~~ 208 (289)
...+++||+.+++.+.+..+ ....+.+..-++ .+|+....... .....+..||...+... .....+... .
T Consensus 168 ~~~v~~~d~~~g~~~~~~~~----~~p~gl~~spdg~~lyv~~~~~~~-~~~~~i~~~~~~~~~l~~~~~~~~~~~~~-p 241 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMADL----DHPNGLAFSPDEQTLYVSQTPEQG-HGSVEITAFAWRDGALHDRRHFASVPDGL-P 241 (305)
T ss_dssp CEEEEEECSSSCCCEEEEEE----SSEEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSC-C
T ss_pred CCeEEEEcCCCCcEEEEecC----CCCcceEEcCCCCEEEEEecCCcC-CCCCEEEEEEecCCCccCCeEEEECCCCC-C
Confidence 45799999988887665411 112344443355 48887432110 01246889988765421 111111111 1
Q ss_pred cceEE-ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeee-eCCeEEEEeCcee
Q 048803 209 CKAVF-HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV-DSNDLYMCREGDV 279 (289)
Q Consensus 209 ~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~ly~~GG~~~ 279 (289)
.+.++ -+|+||+..+ +.|.+||++...-..+.. +. ....+++. -++.||+......
T Consensus 242 dgi~~d~~G~lwv~~~----------~gv~~~~~~g~~~~~~~~---~~--~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSSG----------TGVCVFDSDGQLLGHIPT---PG--TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp CSEEECTTSCEEECCS----------SEEEEECTTSCEEEEEEC---SS--CCCEEEECTTSCEEEEEETTEE
T ss_pred CeEEECCCCCEEEecC----------CcEEEECCCCCEEEEEEC---CC--ceeEEEEeCCCCEEEEEcCCeE
Confidence 12222 3677887641 258999997665555543 11 22222222 2346777765443
No 186
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.29 E-value=8.9 Score=32.22 Aligned_cols=138 Identities=10% Similarity=0.040 Sum_probs=70.3
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe-EEeCCCCCC-CCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT-WRRGADMPG-GRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~-~~~~ 158 (289)
..+.++|+.+++-..+........ . +....++.||+..... ...++++++.++. ...+..... ....
T Consensus 152 ~~I~~id~~~g~~~~~~~~~~~~~-i----a~~~~g~~l~~~d~~~------~~~I~~~d~~~~~~~~~~g~~~~~~~~~ 220 (409)
T 3hrp_A 152 PRVRLISVDDNKVTTVHPGFKGGK-P----AVTKDKQRVYSIGWEG------THTVYVYMKASGWAPTRIGQLGSTFSGK 220 (409)
T ss_dssp TEEEEEETTTTEEEEEEETCCBCB-C----EECTTSSEEEEEBSST------TCEEEEEEGGGTTCEEEEEECCTTSCSC
T ss_pred CcEEEEECCCCEEEEeeccCCCCc-e----eEecCCCcEEEEecCC------CceEEEEEcCCCceeEEeeeccchhcCC
Confidence 467778887765544332211110 1 2223345677764311 2278899987653 233311110 1111
Q ss_pred ceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCC---CCCccccc-c-ceEEE--CCEEEEEeeecCCCCC
Q 048803 159 LFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLP---DMSRERDE-C-KAVFH--CGKLLVIGGYSTNAQG 230 (289)
Q Consensus 159 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~~~~-~-~~~~~--~~~l~~~gG~~~~~~~ 230 (289)
..+.++.- ++.||+... ...+..||+.+..-..+. ........ . ..++. ++.||+....
T Consensus 221 p~~iav~p~~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------ 287 (409)
T 3hrp_A 221 IGAVALDETEEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------ 287 (409)
T ss_dssp CCBCEECTTSSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------
T ss_pred cEEEEEeCCCCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------
Confidence 23455444 689999532 125899999887654431 11111111 1 34443 5889988532
Q ss_pred cccceEEEEECCCC
Q 048803 231 RFERHAEAFDAAAQ 244 (289)
Q Consensus 231 ~~~~~v~~yd~~~~ 244 (289)
.+.|.+||++..
T Consensus 288 --~~~I~~~~~~g~ 299 (409)
T 3hrp_A 288 --LSSVYKITPDGE 299 (409)
T ss_dssp --TTEEEEECTTCC
T ss_pred --CCEEEEEecCCC
Confidence 246888987654
No 187
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.29 E-value=6.9 Score=31.13 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=33.1
Q ss_pred CEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 168 RTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 168 ~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
..+++.|+.+. .+..||..+.+-...-.... .....+. -++++++.|+.++ .+..||..+.+
T Consensus 185 ~~~~~s~~~d~------~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~Dg--------~i~iwd~~~~~ 248 (340)
T 4aow_A 185 NPIIVSCGWDK------LVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDG--------QAMLWDLNEGK 248 (340)
T ss_dssp SCEEEEEETTS------CEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETTC--------EEEEEETTTTE
T ss_pred CcEEEEEcCCC------EEEEEECCCCceeeEecCCC--CcEEEEEECCCCCEEEEEeCCC--------eEEEEEeccCc
Confidence 34556655433 37888888765432211100 1111122 2677778877653 57888877654
No 188
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=89.24 E-value=5.7 Score=31.50 Aligned_cols=165 Identities=12% Similarity=0.091 Sum_probs=74.3
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCe-EE-eCCCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISAT-WR-RGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~-W~-~~~~~~~~~~ 157 (289)
..+.+||..+++-... +...... -..++. -++.+++.|+.+ ..+.+||..++. -. .+.... .
T Consensus 77 ~~i~vwd~~~~~~~~~--~~~h~~~---v~~~~~~~~~~~l~sgs~D-------~~v~lWd~~~~~~~~~~~~~h~---~ 141 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVD--FEAHPDY---IRSIAVHPTKPYVLSGSDD-------LTVKLWNWENNWALEQTFEGHE---H 141 (304)
T ss_dssp SEEEEEETTTCCEEEE--EECCSSC---EEEEEECSSSSEEEEEETT-------SCEEEEEGGGTTEEEEEECCCC---S
T ss_pred CEEEEEECCCCcEEEE--EeCCCCc---EEEEEEcCCCCEEEEECCC-------CeEEEEECCCCcchhhhhcccC---C
Confidence 5678899887653211 1111111 012222 244566666643 447788877652 11 111111 1
Q ss_pred cceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCcccc-ccceEEE----CCEEEEEeeecCCCCCc
Q 048803 158 MLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERD-ECKAVFH----CGKLLVIGGYSTNAQGR 231 (289)
Q Consensus 158 ~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~-~~~~~~~----~~~l~~~gG~~~~~~~~ 231 (289)
...+++..- ++.+++.|+.+. .+..+|..+..=.. .+...+. ....+.+ ++++++.|+.++
T Consensus 142 ~v~~v~~~p~~~~~l~sgs~D~------~v~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~----- 208 (304)
T 2ynn_A 142 FVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNF--TLTTGQERGVNYVDYYPLPDKPYMITASDDL----- 208 (304)
T ss_dssp CEEEEEECTTCTTEEEEEETTS------EEEEEETTCSSCSE--EEECCCTTCEEEEEECCSTTCCEEEEEETTS-----
T ss_pred cEEEEEECCCCCCEEEEEeCCC------eEEEEECCCCCccc--eeccCCcCcEEEEEEEEcCCCCEEEEEcCCC-----
Confidence 112223221 456777777554 47888876542100 0000110 1111111 456677776542
Q ss_pred ccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 232 FERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 232 ~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
.|..||..+.+-. ..+ ..............++.+++.|+.|+
T Consensus 209 ---~i~iWd~~~~~~~--~~~-~~h~~~v~~~~~~p~~~~l~s~s~Dg 250 (304)
T 2ynn_A 209 ---TIKIWDYQTKSCV--ATL-EGHMSNVSFAVFHPTLPIIISGSEDG 250 (304)
T ss_dssp ---EEEEEETTTTEEE--EEE-ECCSSCEEEEEECSSSSEEEEEETTS
T ss_pred ---eEEEEeCCCCccc--eee-CCCCCCEEEEEECCCCCEEEEEcCCC
Confidence 6889998776422 211 01111111122344666777776553
No 189
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=89.04 E-value=12 Score=33.28 Aligned_cols=108 Identities=16% Similarity=0.224 Sum_probs=54.7
Q ss_pred eEEEEECCCCC--eEeCCCCCCCCCC--CCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCC
Q 048803 82 RITVLELGSGE--WSELPPIPGFPDG--LPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGG 155 (289)
Q Consensus 82 ~~~~~d~~~~~--W~~~~~~~~~~~~--~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~ 155 (289)
.++++|..+++ |+.-...+..... .......+..+++||+... ...++.+|..|++ |+.-..-+..
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--------dg~l~AlD~~TG~~~W~~~~~~~~~ 150 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--------DASVVALNKNTGKVVWKKKFADHGA 150 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--------TTEEEEEESSSCCEEEEEECSCGGG
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--------CCEEEEEECCCCCEEeeecCCCCCc
Confidence 48899998776 7654333221100 0000134567888887532 3568889998886 8753221100
Q ss_pred CccceeEEEecCC------EEEEEcCCCCCCcccCceEEEEcCCCc--eEe
Q 048803 156 RRMLFGCASDGDR------TVYVAGGHDEDKNALKSAMAYDVARDE--WAS 198 (289)
Q Consensus 156 ~~~~~~~~~~~~~------~iyv~GG~~~~~~~~~~~~~yd~~~~~--W~~ 198 (289)
.....+..++.++ .||+ |....+......+..||++|++ |+.
T Consensus 151 ~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 151 GYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp TCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred CcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 0011111111244 5655 3321111123468999999874 864
No 190
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.01 E-value=3.9 Score=34.67 Aligned_cols=136 Identities=10% Similarity=0.007 Sum_probs=64.4
Q ss_pred EEEEEeCcCCCCcccccceEEEEcc--CCeE-EeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 118 ELVVIGGLDLTTWEASSSVFVFNII--SATW-RRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 118 ~lyv~GG~~~~~~~~~~~~~~yd~~--t~~W-~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
.|++.|+.+ ..+.+||.. +++- ..+.... ......+++..-++...++|+.+. .+..++..+.
T Consensus 116 ~l~~~~~~d-------g~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~g------~v~~~~~~~~ 181 (450)
T 2vdu_B 116 RLIACADSD-------KSLLVFDVDKTSKNVLKLRKRFC-FSKRPNAISIAEDDTTVIIADKFG------DVYSIDINSI 181 (450)
T ss_dssp EEEEEEGGG-------TEEEEEEECSSSSSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEETTS------EEEEEETTSC
T ss_pred EEEEEECCC-------CeEEEEECcCCCCceeeeeeccc-CCCCceEEEEcCCCCEEEEEeCCC------cEEEEecCCc
Confidence 456777643 447788876 4432 2221101 011122333323666666665422 4788887765
Q ss_pred ceEe--CCCCCcccc-ccce--EEEC---CEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeee
Q 048803 195 EWAS--LPDMSRERD-ECKA--VFHC---GKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV 266 (289)
Q Consensus 195 ~W~~--~~~~~~~~~-~~~~--~~~~---~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 266 (289)
.-.. +..+. .+. .... ..-+ +++++.|+.++ .|.+||..+.+-...-. .............
T Consensus 182 ~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d~--------~i~vwd~~~~~~~~~~~--~~h~~~v~~~~~s 250 (450)
T 2vdu_B 182 PEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQFIITSDRDE--------HIKISHYPQCFIVDKWL--FGHKHFVSSICCG 250 (450)
T ss_dssp CCSSCCCCCSE-ECSSCEEEEEEEECTTSCEEEEEEETTS--------CEEEEEESCTTCEEEEC--CCCSSCEEEEEEC
T ss_pred ccccccceeee-cccCceEEEEEcCCCCCCcEEEEEcCCC--------cEEEEECCCCceeeeee--cCCCCceEEEEEC
Confidence 4331 11121 221 1111 2236 77888887642 58889987765332210 0111111112233
Q ss_pred eCCeEEEEeCcee
Q 048803 267 DSNDLYMCREGDV 279 (289)
Q Consensus 267 ~~~~ly~~GG~~~ 279 (289)
++++++.|+.|.
T Consensus 251 -d~~~l~s~~~d~ 262 (450)
T 2vdu_B 251 -KDYLLLSAGGDD 262 (450)
T ss_dssp -STTEEEEEESSS
T ss_pred -CCCEEEEEeCCC
Confidence 777777777553
No 191
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.80 E-value=9.8 Score=33.80 Aligned_cols=119 Identities=14% Similarity=0.096 Sum_probs=66.5
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCCCc--c---ceeEEEecCCEEEEEcCCCCCCccc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGGRR--M---LFGCASDGDRTVYVAGGHDEDKNAL 183 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~--~---~~~~~~~~~~~iyv~GG~~~~~~~~ 183 (289)
+.++.++.||+.... ..++.+|..|++ |+.-...+.... + ..+.++ .+++||+... .
T Consensus 63 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~-~~~~v~~~t~-------d 126 (582)
T 1flg_A 63 QAIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI-YGDKVFFGTL-------D 126 (582)
T ss_dssp CCEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE-ETTEEEEEET-------T
T ss_pred ccEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE-ECCEEEEEeC-------C
Confidence 345689999998542 238889998876 876543331110 0 122333 4888888532 1
Q ss_pred CceEEEEcCCCc--eEeCCCCCccc--cccceEEECC------EEEEEeeecCCCCCcccceEEEEECCCCc--eee
Q 048803 184 KSAMAYDVARDE--WASLPDMSRER--DECKAVFHCG------KLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGP 248 (289)
Q Consensus 184 ~~~~~yd~~~~~--W~~~~~~~~~~--~~~~~~~~~~------~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~ 248 (289)
..+..+|.+|++ |+.-...+... ...+.++.++ .||+-..... ......+.+||.++++ |+.
T Consensus 127 g~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e---~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 127 ASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDE---FGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp TEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGG---GCCBCEEEEECTTTCCEEEEE
T ss_pred CEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccc---cCCCCEEEEEECCCCCEEeec
Confidence 358999999874 97532221111 1223345566 6655321110 0012479999998764 864
No 192
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.44 E-value=9.9 Score=31.65 Aligned_cols=130 Identities=12% Similarity=0.036 Sum_probs=72.0
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeC--CCCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRG--ADMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....++++++....-+.+ ..+. ...+.++. .++.||+.--.. ...++.+++
T Consensus 169 ~~g~lY~~d~-------~~~~I~~~~~dg~~~~~l~~~~l~----~P~giavdp~~g~ly~td~~~-----~~~I~r~~~ 232 (386)
T 3v65_B 169 VHDKLYWTDS-------GTSRIEVANLDGAHRKVLLWQSLE----KPRAIALHPMEGTIYWTDWGN-----TPRIEASSM 232 (386)
T ss_dssp TTTEEEEEET-------TTTEEEECBTTSCSCEEEECSSCS----CEEEEEEETTTTEEEEEECSS-----SCEEEEEET
T ss_pred CCCeEEEEcC-------CCCeEEEEeCCCCceEEeecCCCC----CCcEEEEEcCCCeEEEeccCC-----CCEEEEEeC
Confidence 4789998753 235678888765432222 1222 12445554 378999984211 246899998
Q ss_pred CCCceEeCC--CCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASLP--DMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~~--~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
....-..+. .+..| .+.++ .+++||+.-.. .+.|+++|++...=..+... ...++ .++++.
T Consensus 233 dG~~~~~~~~~~~~~P---nGlavd~~~~~lY~aD~~--------~~~I~~~d~dG~~~~~~~~~---~~~~P-~giav~ 297 (386)
T 3v65_B 233 DGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVDAK--------HHVIERANLDGSHRKAVISQ---GLPHP-FAITVF 297 (386)
T ss_dssp TSCSCEEEECSSCSCE---EEEEEEGGGTEEEEEETT--------TTEEEEECTTSCSCEEEECS---SCSSE-EEEEEE
T ss_pred CCCCcEEEEECCCCCe---eeEEEeCCCCEEEEEECC--------CCEEEEEeCCCCeeEEEEEC---CCCCc-eEEEEE
Confidence 754333221 12212 22333 37899998532 24799999875432322221 11222 356668
Q ss_pred CCeEEEEe
Q 048803 268 SNDLYMCR 275 (289)
Q Consensus 268 ~~~ly~~G 275 (289)
++.||+..
T Consensus 298 ~~~ly~td 305 (386)
T 3v65_B 298 EDSLYWTD 305 (386)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEee
Confidence 89999985
No 193
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=88.43 E-value=9.3 Score=31.31 Aligned_cols=161 Identities=11% Similarity=0.037 Sum_probs=86.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE--eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA--VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+..+++.......+.+-.. .. .+++. .++.||+.-- ....++++++....-+.+.... ...
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~--~~----~~l~~d~~~~~ly~~D~-------~~~~I~r~~~~g~~~~~~~~~~--~~~ 117 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLE--NA----IALDFHHRRELVFWSDV-------TLDRILRANLNGSNVEEVVSTG--LES 117 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCS--CE----EEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECSS--CSC
T ss_pred cceEEEeCCCCeeEEeecCCC--ce----EEEEEeccccEEEEEec-------cCCceEEEecCCCCceEEEeCC--CCC
Confidence 356677887766654432111 11 13333 3578998743 2456889998876544432211 111
Q ss_pred ceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEcCCCceEeC--CCCCccccccceEEE--CCEEEEEeeecCCCCCccc
Q 048803 159 LFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDVARDEWASL--PDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFE 233 (289)
Q Consensus 159 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~ 233 (289)
..+.++. .++.||+.-.. ...++.+++....-..+ ..+..|+ ..++- ++.||+..... .
T Consensus 118 p~glavd~~~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~~-------~ 181 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWGN-------T 181 (349)
T ss_dssp CCEEEEETTTTEEEEEETT------TTEEEEEETTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEECSS-------S
T ss_pred ccEEEEecCCCeEEEEcCC------CCeEEEEcCCCCceEEEEeCCCCCcc---eEEEecCcCeEEEeccCC-------C
Confidence 2445554 37899998432 23688888876543322 2233332 23333 68899885321 1
Q ss_pred ceEEEEECCCCceeecccccccCCCCCCceeee--eCCeEEEEeC
Q 048803 234 RHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV--DSNDLYMCRE 276 (289)
Q Consensus 234 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~ly~~GG 276 (289)
..|++++++...-..+... ....+. +++. .+++||+...
T Consensus 182 ~~I~r~~~dG~~~~~~~~~---~~~~Pn-Gla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 182 PRIEASSMDGSGRRIIADT---HLFWPN-GLTIDYAGRRMYWVDA 222 (349)
T ss_dssp CEEEEEETTSCSCEESCCS---SCSCEE-EEEEETTTTEEEEEET
T ss_pred CEEEEEeCCCCCcEEEEEC---CCCCcc-eEEEeCCCCEEEEEEC
Confidence 3689999876543333221 111222 3443 4788888854
No 194
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=88.23 E-value=1.9 Score=34.69 Aligned_cols=53 Identities=9% Similarity=-0.026 Sum_probs=32.3
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCC-CCCCceeeeeCCeEEEEeCceee
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETA-TCPRSCAGVDSNDLYMCREGDVM 280 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~-~~~~~~~~~~~~~ly~~GG~~~~ 280 (289)
++++++.|+.++ .|.+||..+.+-.. .. ... .....+++ .++++++.|+.|+.
T Consensus 262 ~~~~l~~~~~dg--------~i~vwd~~~~~~~~--~~--~~~h~~~v~~~~-~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 262 RHKFLYTAGSDG--------IISCWNLQTRKKIK--NF--AKFNEDSVVKIA-CSDNILCLATSDDT 315 (342)
T ss_dssp TTCCEEEEETTS--------CEEEEETTTTEEEE--EC--CCCSSSEEEEEE-ECSSEEEEEEECTH
T ss_pred CCCEEEEecCCc--------eEEEEcCccHhHhh--hh--hcccCCCceEec-CCCCeEEEEecCCc
Confidence 577777776542 58999998765322 21 111 11222445 78999999988765
No 195
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=88.07 E-value=9.7 Score=31.10 Aligned_cols=24 Identities=17% Similarity=0.202 Sum_probs=16.4
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
++...+.|+.+. .+..||+.+.+-
T Consensus 256 ~~~~l~~~~~dg------~i~vwd~~~~~~ 279 (408)
T 4a11_B 256 DGLHLLTVGTDN------RMRLWNSSNGEN 279 (408)
T ss_dssp TSSEEEEEETTS------CEEEEETTTCCB
T ss_pred CCCEEEEecCCC------eEEEEECCCCcc
Confidence 666667766543 388999987653
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=88.03 E-value=11 Score=31.67 Aligned_cols=139 Identities=9% Similarity=-0.061 Sum_probs=71.0
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCC---CCCCCCccce-eEEEec-CCEEEEEcCCCCCCcccCceEEEE
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGA---DMPGGRRMLF-GCASDG-DRTVYVAGGHDEDKNALKSAMAYD 190 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~---~~~~~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd 190 (289)
++.||+.. ....+++||+.+.....+. .......... +.+..- ++.+|+.... ...+.+||
T Consensus 230 ~g~lyv~d--------~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~------~~~I~~~~ 295 (409)
T 3hrp_A 230 EEWLYFVD--------SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN------LSSVYKIT 295 (409)
T ss_dssp SSEEEEEC--------TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT------TTEEEEEC
T ss_pred CCeEEEEE--------CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC------CCEEEEEe
Confidence 67899842 2346899999887654441 1111111112 455544 6899998432 34588888
Q ss_pred cCCCceEeCCCC-----Cc-----c-ccccceEEE--CCEEEEEee-ecCCCCCcccceEEEEECCCCceeecccccc--
Q 048803 191 VARDEWASLPDM-----SR-----E-RDECKAVFH--CGKLLVIGG-YSTNAQGRFERHAEAFDAAAQQWGPVEEDFM-- 254 (289)
Q Consensus 191 ~~~~~W~~~~~~-----~~-----~-~~~~~~~~~--~~~l~~~gG-~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~-- 254 (289)
+....-...... .. . ........+ +|+||+... .+ ..|.++|+.+++-..+.....
T Consensus 296 ~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~--------~~I~~~~~~~G~v~~~~g~~~~~ 367 (409)
T 3hrp_A 296 PDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG--------YCLRKLDILDGYVSTVAGQVDVA 367 (409)
T ss_dssp TTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT--------CEEEEEETTTTEEEEEEECTTCB
T ss_pred cCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC--------CEEEEEECCCCEEEEEeCCCCCC
Confidence 765421111111 00 0 011222222 577998854 22 368999976666554433100
Q ss_pred ---------cCCCCCCceee-eeCCeEEEEeCc
Q 048803 255 ---------ETATCPRSCAG-VDSNDLYMCREG 277 (289)
Q Consensus 255 ---------~~~~~~~~~~~-~~~~~ly~~GG~ 277 (289)
.....+. +++ .-++.||+....
T Consensus 368 g~~~g~~~~~~~~~P~-giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 368 SQIDGTPLEATFNYPY-DICYDGEGGYWIAEAW 399 (409)
T ss_dssp SCCCBSTTTCCBSSEE-EEEECSSSEEEEEEST
T ss_pred CcCCCChhceEeCCce-EEEEcCCCCEEEEECC
Confidence 0011222 343 345899998754
No 197
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=87.97 E-value=2.2 Score=34.78 Aligned_cols=113 Identities=16% Similarity=0.112 Sum_probs=52.8
Q ss_pred EEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceE--EEEcCCCc
Q 048803 119 LVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAM--AYDVARDE 195 (289)
Q Consensus 119 lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~--~yd~~~~~ 195 (289)
.+++|.+.... ...-.++.+|..+++.+.+.... .. .....+..-++ .||+.+...+. ...+. .+|..+++
T Consensus 15 ~~~vg~y~~~~-~~~i~~~~~d~~~g~~~~~~~~~-~~-~p~~l~~spdg~~l~~~~~~~~~---~~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 15 TMLVGTYTSGN-SKGIYTFRFNEETGESLPLSDAE-VA-NPSYLIPSADGKFVYSVNEFSKD---QAAVSAFAFDKEKGT 88 (361)
T ss_dssp EEEEEECCSSS-CCEEEEEEEETTTCCEEEEEEEE-CS-CCCSEEECTTSSEEEEEECCSST---TCEEEEEEEETTTTE
T ss_pred EEEEEeccCCC-CCCEEEEEEeCCCCCEEEeeccc-CC-CCceEEECCCCCEEEEEEccCCC---CCcEEEEEEeCCCCc
Confidence 34456654332 12334556677888876654331 11 11223332345 47776553211 12354 44555566
Q ss_pred eEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCC
Q 048803 196 WASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQ 244 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~ 244 (289)
.+.+...+...........+++.+++..... ..+.+|+..++
T Consensus 89 ~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~-------~~v~~~~~~~~ 130 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTTNGKNIVTANYSG-------GSITVFPIGQD 130 (361)
T ss_dssp EEEEEEEECSSSCEEEEEECSSEEEEEETTT-------TEEEEEEBCTT
T ss_pred EEEeeEeccCCCCcEEEEECCCEEEEEECCC-------CEEEEEEeCCC
Confidence 7665443322222222222665444433321 36788888643
No 198
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=87.96 E-value=8.6 Score=30.38 Aligned_cols=66 Identities=12% Similarity=0.201 Sum_probs=34.4
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCC-------eEEeCCCCCCCCccceeEEEecC--CEEEEEcCCCCCCcccCceE
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISA-------TWRRGADMPGGRRMLFGCASDGD--RTVYVAGGHDEDKNALKSAM 187 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~-------~W~~~~~~~~~~~~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~ 187 (289)
+.+++.|+.+ ..+.+||..+. .|+.+..+.........++..-+ +.+++.|+.+. .+.
T Consensus 71 ~~~l~s~~~d-------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg------~v~ 137 (351)
T 3f3f_A 71 GRIIASASYD-------KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG------ILR 137 (351)
T ss_dssp CSEEEEEETT-------SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC------EEE
T ss_pred CCEEEEEcCC-------CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC------cEE
Confidence 5666776643 34777887664 23333222211111223333224 66777766443 488
Q ss_pred EEEcCCCc
Q 048803 188 AYDVARDE 195 (289)
Q Consensus 188 ~yd~~~~~ 195 (289)
.||..+.+
T Consensus 138 iwd~~~~~ 145 (351)
T 3f3f_A 138 LYDALEPS 145 (351)
T ss_dssp EEECSSTT
T ss_pred EecCCChH
Confidence 88887653
No 199
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=87.79 E-value=9.6 Score=30.72 Aligned_cols=66 Identities=6% Similarity=0.036 Sum_probs=38.1
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceE-EECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAV-FHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
++.+++.|+.+. .+..||+.+.+-..+........-.+++ .-++++++.|+.++ .|..||..+.+
T Consensus 138 ~~~~l~s~s~dg------~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg--------~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNRG------TIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG--------ILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETTC------CEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS--------CEEEEESSCTT
T ss_pred CCCEEEEEeCCC------cEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCC
Confidence 556777776544 3889999877653322111111111122 23678888887653 68999998775
Q ss_pred e
Q 048803 246 W 246 (289)
Q Consensus 246 W 246 (289)
-
T Consensus 204 ~ 204 (343)
T 3lrv_A 204 Q 204 (343)
T ss_dssp S
T ss_pred C
Confidence 3
No 200
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=87.68 E-value=4.3 Score=34.54 Aligned_cols=133 Identities=9% Similarity=0.016 Sum_probs=70.3
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCE-EEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRT-VYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++.||++-- ...+.++|+.+++.+.+.... ....+.++..++. ||+....... ....+..++...
T Consensus 149 ~g~Lyv~d~--------~~~I~~id~~~~~v~~~~~~~---~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~g- 214 (430)
T 3tc9_A 149 HNHLYLVGE--------QHPTRLIDFEKEYVSTVYSGL---SKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRES- 214 (430)
T ss_dssp EEEEEEEEB--------TEEEEEEETTTTEEEEEECCC---SCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGGG-
T ss_pred CCeEEEEeC--------CCcEEEEECCCCEEEEEecCC---CCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCCC-
Confidence 478998832 167899999998877664422 2234455544554 9998643321 112355566543
Q ss_pred ceE---eCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCC
Q 048803 195 EWA---SLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSN 269 (289)
Q Consensus 195 ~W~---~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 269 (289)
.|. .++.+.. .+.+++. ++.||+.--. .+.|++||+.+..-..+... +....+...++..++
T Consensus 215 ~~~~~~~l~~~~~---p~giavdp~~g~lyv~d~~--------~~~V~~~~~~~~~~~~~~~~--~~~~~P~gia~~pdG 281 (430)
T 3tc9_A 215 GFKVITELTKGQN---CNGAETHPINGELYFNSWN--------AGQVFRYDFTTQETTPLFTI--QDSGWEFHIQFHPSG 281 (430)
T ss_dssp TSCSEEEEEECSS---CCCEEECTTTCCEEEEETT--------TTEEEEEETTTTEEEEEEEC--SSSSCCEEEEECTTS
T ss_pred ceeeeeeeccCCC---ceEEEEeCCCCEEEEEECC--------CCEEEEEECCCCcEEEEEEc--CCCCcceeEEEcCCC
Confidence 332 2222222 2333442 5788887532 13699999987654333221 111223322333345
Q ss_pred e-EEEEe
Q 048803 270 D-LYMCR 275 (289)
Q Consensus 270 ~-ly~~G 275 (289)
+ ||+..
T Consensus 282 ~~lyv~d 288 (430)
T 3tc9_A 282 NYAYIVV 288 (430)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 4 77774
No 201
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=87.66 E-value=4 Score=32.03 Aligned_cols=103 Identities=12% Similarity=0.114 Sum_probs=51.0
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
.++..++.|+.+ ..+.+||..+.+-...-... .......+..-++.+.+.|+.+. .+..++..+.
T Consensus 27 ~~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg------~i~~~~~~~~ 91 (313)
T 3odt_A 27 VDDSKVASVSRD-------GTVRLWSKDDQWLGTVVYTG--QGFLNSVCYDSEKELLLFGGKDT------MINGVPLFAT 91 (313)
T ss_dssp EETTEEEEEETT-------SEEEEEEESSSEEEEEEEEC--SSCEEEEEEETTTTEEEEEETTS------CEEEEETTCC
T ss_pred cCCCEEEEEEcC-------CcEEEEECCCCEEEEEeecC--CccEEEEEECCCCCEEEEecCCC------eEEEEEeeec
Confidence 445555566533 45788888776543322111 11122333334677777776543 3667776543
Q ss_pred c-eEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEE
Q 048803 195 E-WASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 195 ~-W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
. ...+..+.........+..+++.++.|+.++ .+..||
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~--------~i~~~d 130 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDK--------TAKVWK 130 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEEETTEEEEEETTS--------EEEEEE
T ss_pred CCCCcccchhhcccCEEEEEecCCEEEEEeCCC--------CEEEEc
Confidence 2 2222222211122233344666777776542 578888
No 202
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=87.39 E-value=9.5 Score=30.27 Aligned_cols=128 Identities=12% Similarity=0.132 Sum_probs=59.9
Q ss_pred cceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE
Q 048803 134 SSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF 213 (289)
Q Consensus 134 ~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 213 (289)
..+.+||..+.+-...-.-. .....+++..-++.+++.|+.+. .+..||..+..-.. .+.....-...+.
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~~~~~~--~~~~~~~v~~~~~ 264 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDG------QAMLWDLNEGKHLY--TLDGGDIINALCF 264 (340)
T ss_dssp SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTC------EEEEEETTTTEEEE--EEECSSCEEEEEE
T ss_pred CEEEEEECCCCceeeEecCC--CCcEEEEEECCCCCEEEEEeCCC------eEEEEEeccCceee--eecCCceEEeeec
Confidence 34778898887653322111 11122333333677777777543 47888887653221 1111111111222
Q ss_pred ECCEEEEEeeecCCCCCcccceEEEEECCCCceee-ccccccc--CCCCCC--cee-eeeCCeEEEEeCcee
Q 048803 214 HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP-VEEDFME--TATCPR--SCA-GVDSNDLYMCREGDV 279 (289)
Q Consensus 214 ~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~--~~~~~~--~~~-~~~~~~ly~~GG~~~ 279 (289)
..+..++.++.+ ..|.+||..+..-.. +...... ...+.. .++ ...+++.++.|+.|+
T Consensus 265 ~~~~~~~~~~~d--------~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 265 SPNRYWLCAATG--------PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp CSSSSEEEEEET--------TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceeeccCC--------CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 334445555543 257888887654321 1110000 001111 122 235778888887664
No 203
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=86.91 E-value=12 Score=31.10 Aligned_cols=106 Identities=13% Similarity=0.096 Sum_probs=54.4
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+.+++.|+.+ ..+.+||..+.+-.. +...++ .....+++..-++...+.|+.+. .+..||+.+.+
T Consensus 182 ~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~ 247 (437)
T 3gre_A 182 KSLLVALTNL-------SRVIIFDIRTLERLQIIENSPR-HGAVSSICIDEECCVLILGTTRG------IIDIWDIRFNV 247 (437)
T ss_dssp CEEEEEEETT-------SEEEEEETTTCCEEEEEECCGG-GCCEEEEEECTTSCEEEEEETTS------CEEEEETTTTE
T ss_pred CCEEEEEeCC-------CeEEEEeCCCCeeeEEEccCCC-CCceEEEEECCCCCEEEEEcCCC------eEEEEEcCCcc
Confidence 5666666643 458889988766322 221110 11122333323677777776554 38899998765
Q ss_pred eEeCCCCCccccccceE-E-----ECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 196 WASLPDMSRERDECKAV-F-----HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~-~-----~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
-...-..+.. .....+ . -++++++.|+.+ ..|.+||..+++
T Consensus 248 ~~~~~~~~~~-~~v~~~~~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~~ 294 (437)
T 3gre_A 248 LIRSWSFGDH-APITHVEVCQFYGKNSVIVVGGSSK--------TFLTIWNFVKGH 294 (437)
T ss_dssp EEEEEBCTTC-EEEEEEEECTTTCTTEEEEEEESTT--------EEEEEEETTTTE
T ss_pred EEEEEecCCC-CceEEEEeccccCCCccEEEEEcCC--------CcEEEEEcCCCc
Confidence 4321111111 011111 1 135566666543 258888887665
No 204
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.76 E-value=9.4 Score=29.54 Aligned_cols=107 Identities=10% Similarity=-0.053 Sum_probs=60.2
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++.||+..... ....++++++....-+.+.... .....+.+... +++||+.-.. ...+.+||+...
T Consensus 133 ~g~lyv~~~~~-----~~~~I~~~~~dg~~~~~~~~~~--~~~P~gia~d~~~~~lyv~d~~------~~~I~~~~~~g~ 199 (267)
T 1npe_A 133 RGNLYWTDWNR-----DNPKIETSHMDGTNRRILAQDN--LGLPNGLTFDAFSSQLCWVDAG------THRAECLNPAQP 199 (267)
T ss_dssp TTEEEEEECCS-----SSCEEEEEETTSCCCEEEECTT--CSCEEEEEEETTTTEEEEEETT------TTEEEEEETTEE
T ss_pred CCEEEEEECCC-----CCcEEEEEecCCCCcEEEEECC--CCCCcEEEEcCCCCEEEEEECC------CCEEEEEecCCC
Confidence 68999985321 1356788887654322222111 12234555543 5789998432 346899998754
Q ss_pred ceEeC-CCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 195 EWASL-PDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 195 ~W~~~-~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
.-..+ .....| .+.+.-++.||+..... +.|.++|+.+++-
T Consensus 200 ~~~~~~~~~~~P---~gi~~d~~~lyva~~~~--------~~v~~~d~~~g~~ 241 (267)
T 1npe_A 200 GRRKVLEGLQYP---FAVTSYGKNLYYTDWKT--------NSVIAMDLAISKE 241 (267)
T ss_dssp EEEEEEECCCSE---EEEEEETTEEEEEETTT--------TEEEEEETTTTEE
T ss_pred ceEEEecCCCCc---eEEEEeCCEEEEEECCC--------CeEEEEeCCCCCc
Confidence 32221 222222 23455688999975321 3689999987654
No 205
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=86.67 E-value=6 Score=31.80 Aligned_cols=105 Identities=9% Similarity=0.154 Sum_probs=55.6
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
+.+++.|+.+ ..+.+||..+........+.........++..-++...+.|+.+. .+..+|..+.+-
T Consensus 54 g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg------~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWA-------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK------TAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETT-------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEE
T ss_pred ceEEEEECCC-------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC------cEEEEEcCCCCc
Confidence 3777777643 447788887632221111110011122333323666666665443 488899988765
Q ss_pred EeCCCCCccccccceEE----ECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 197 ASLPDMSRERDECKAVF----HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~~----~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
........ ....+. -++++++.|+.++ .+..||..+.+
T Consensus 121 ~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~~~ 162 (368)
T 3mmy_A 121 IQIAQHDA---PVKTIHWIKAPNYSCVMTGSWDK--------TLKFWDTRSSN 162 (368)
T ss_dssp EEEEECSS---CEEEEEEEECSSCEEEEEEETTS--------EEEEECSSCSS
T ss_pred eeeccccC---ceEEEEEEeCCCCCEEEEccCCC--------cEEEEECCCCc
Confidence 44321111 112222 3677777777643 68899987764
No 206
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.61 E-value=16 Score=32.84 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=33.8
Q ss_pred EEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccc-cceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 169 TVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDE-CKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 169 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
..++.|+.+. .+..+|+.+.+-... +. .+.. ...+. -++++++.|+.++ .|.+||..+.+
T Consensus 532 ~~l~s~s~d~------~v~vwd~~~~~~~~~--~~-~h~~~v~~v~~spdg~~l~sg~~Dg--------~i~iwd~~~~~ 594 (694)
T 3dm0_A 532 PTIVSASWDK------TVKVWNLSNCKLRST--LA-GHTGYVSTVAVSPDGSLCASGGKDG--------VVLLWDLAEGK 594 (694)
T ss_dssp CEEEEEETTS------CEEEEETTTCCEEEE--EC-CCSSCEEEEEECTTSSEEEEEETTS--------BCEEEETTTTE
T ss_pred ceEEEEeCCC------eEEEEECCCCcEEEE--Ec-CCCCCEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCc
Confidence 3556665443 488899887643221 11 1111 11122 2677888887653 57889987765
No 207
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.52 E-value=17 Score=32.34 Aligned_cols=148 Identities=9% Similarity=0.005 Sum_probs=80.6
Q ss_pred eeEEEEECC-CC---CeEeCCCCCCCCCCCCceeEEE-EeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCC
Q 048803 81 YRITVLELG-SG---EWSELPPIPGFPDGLPLFCQLS-AVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGG 155 (289)
Q Consensus 81 ~~~~~~d~~-~~---~W~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 155 (289)
..++++|.. ++ +.+.+..-.. .. ....+ .-++++|+.+..+ ....++++|+.+++++.+......
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~--~~---~~~~~~spdg~l~~~~~~~-----~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPE--EA---IAQAEWAPDGSLIVATDRT-----GWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETT--BC---EEEEEECTTSCEEEEECTT-----SSCEEEEECTTTCCEEESSCCSSB
T ss_pred cEEEEEEECCCCcccccEEeCCCCC--ce---EcceEECCCCeEEEEECCC-----CCeEEEEEECCCCceeeccccccc
Confidence 578899998 56 3333322110 11 01222 2356777766543 134689999988999887654311
Q ss_pred Cc----c--ceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccce-EEECCEEEEEeeecCCC
Q 048803 156 RR----M--LFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKA-VFHCGKLLVIGGYSTNA 228 (289)
Q Consensus 156 ~~----~--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~l~~~gG~~~~~ 228 (289)
.. . ....+..-++++++.+.. . ...++.+|+.++....+....... ... ..-++++++..+...
T Consensus 287 ~~~p~w~~~~~~~~~~~~~~~~~~~~~-~----~~~l~~~d~~~~~~~~l~~~~~~~--~~~~s~~~~~~~~~~~~~~-- 357 (662)
T 3azo_A 287 FAGPLWTPGMRWFAPLANGLIAVVHGK-G----AAVLGILDPESGELVDAAGPWTEW--AATLTVSGTRAVGVAASPR-- 357 (662)
T ss_dssp SSCCCCSTTCCSEEECTTSCEEEEEBS-S----SCEEEEEETTTTEEEECCSSCCEE--EEEEEEETTEEEEEEEETT--
T ss_pred ccCccccccCceEeEeCCCEEEEEEEc-C----ccEEEEEECCCCcEEEecCCCCeE--EEEEecCCCEEEEEEcCCC--
Confidence 10 0 112333236777776543 2 235788898888777664322111 122 234566666654432
Q ss_pred CCcccceEEEEECCCCceeecc
Q 048803 229 QGRFERHAEAFDAAAQQWGPVE 250 (289)
Q Consensus 229 ~~~~~~~v~~yd~~~~~W~~~~ 250 (289)
....++.+|..+++...+.
T Consensus 358 ---~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 358 ---TAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp ---EEEEEEEEETTTCCEEEEE
T ss_pred ---CCCEEEEEECCCCceEEee
Confidence 1236788888888776653
No 208
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=86.46 E-value=12 Score=30.32 Aligned_cols=156 Identities=10% Similarity=0.078 Sum_probs=74.3
Q ss_pred CCCeEeCCCCC-CCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC
Q 048803 90 SGEWSELPPIP-GFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR 168 (289)
Q Consensus 90 ~~~W~~~~~~~-~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~ 168 (289)
..+|+.+.... .+.. ....+....+.+|++|. ...+++-+-.-.+|+.+......+.........-++
T Consensus 65 G~tW~~~~~~~~~~~~---~~~~i~~~~~~~~~~g~--------~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~ 133 (327)
T 2xbg_A 65 GQTWEPRTLVLDHSDY---RFNSVSFQGNEGWIVGE--------PPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNG 133 (327)
T ss_dssp TSSCEECCCCCSCCCC---EEEEEEEETTEEEEEEE--------TTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETT
T ss_pred CCCCeECCCCCCCCCc---cEEEEEecCCeEEEEEC--------CCeEEEECCCCCCceECccccCCCCCeEEEEEECCC
Confidence 45799875321 2111 12244455678888752 122333222245799876432111122334433378
Q ss_pred EEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CCEEEEEeeecCCCCCcccceEEEE-ECCCCce
Q 048803 169 TVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CGKLLVIGGYSTNAQGRFERHAEAF-DAAAQQW 246 (289)
Q Consensus 169 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~v~~y-d~~~~~W 246 (289)
.+|+.+... .++.-+=.-.+|+.+...... ....++.. +++++++|. . ..++.- |....+|
T Consensus 134 ~~~~~~~~g-------~v~~S~DgG~tW~~~~~~~~~-~~~~~~~~~~~~~~~~g~-~--------G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 134 SAEMITNVG-------AIYRTKDSGKNWQALVQEAIG-VMRNLNRSPSGEYVAVSS-R--------GSFYSTWEPGQTAW 196 (327)
T ss_dssp EEEEEETTC-------CEEEESSTTSSEEEEECSCCC-CEEEEEECTTSCEEEEET-T--------SSEEEEECTTCSSC
T ss_pred CEEEEeCCc-------cEEEEcCCCCCCEEeecCCCc-ceEEEEEcCCCcEEEEEC-C--------CcEEEEeCCCCCce
Confidence 888876411 133322224579987543222 11222222 566666552 1 124443 3336789
Q ss_pred eecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 247 GPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
+.+... . .......+...++++|+++.
T Consensus 197 ~~~~~~--~-~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 197 EPHNRT--T-SRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp EEEECC--S-SSCEEEEEECTTSCEEEEET
T ss_pred eECCCC--C-CCccceeEECCCCCEEEEeC
Confidence 988542 1 11111122234678887764
No 209
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=86.42 E-value=3.2 Score=34.11 Aligned_cols=61 Identities=8% Similarity=0.138 Sum_probs=33.8
Q ss_pred EEEEEcCCCCCCcccCceEEEEcCCCc------eEeCCCCCcc--ccc-cceEEE-----CCEE-EEEeeecCCCCCccc
Q 048803 169 TVYVAGGHDEDKNALKSAMAYDVARDE------WASLPDMSRE--RDE-CKAVFH-----CGKL-LVIGGYSTNAQGRFE 233 (289)
Q Consensus 169 ~iyv~GG~~~~~~~~~~~~~yd~~~~~------W~~~~~~~~~--~~~-~~~~~~-----~~~l-~~~gG~~~~~~~~~~ 233 (289)
.+++.|+.+. .+..||..+.. +..+...+.. ... .+++.. +++. ++.|+.++
T Consensus 82 ~~l~s~~~dg------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg------- 148 (397)
T 1sq9_A 82 CLVATTSFSG------DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG------- 148 (397)
T ss_dssp EEEEEEETTS------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-------
T ss_pred cEEEEEcCCC------CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-------
Confidence 7777776543 38888888765 6655443211 111 122222 4666 77776542
Q ss_pred ceEEEEECCC
Q 048803 234 RHAEAFDAAA 243 (289)
Q Consensus 234 ~~v~~yd~~~ 243 (289)
.+..||..+
T Consensus 149 -~i~iwd~~~ 157 (397)
T 1sq9_A 149 -TTYIWKFHP 157 (397)
T ss_dssp -CEEEEEEES
T ss_pred -cEEEEeCCc
Confidence 578888766
No 210
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=86.26 E-value=6 Score=34.48 Aligned_cols=133 Identities=11% Similarity=0.089 Sum_probs=64.5
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+++.++.++.+ ..+.+||.....-..+.... .. ..+++..-++++.+.|+.+. .+..+|.....
T Consensus 437 d~~~l~~~~~d-------~~v~~w~~~~~~~~~~~~~~-~~--v~~~~~spd~~~las~~~d~------~i~iw~~~~~~ 500 (577)
T 2ymu_A 437 DDQTIASASDD-------KTVKLWNRNGQLLQTLTGHS-SS--VRGVAFSPDGQTIASASDDK------TVKLWNRNGQL 500 (577)
T ss_dssp TSSEEEEEETT-------SEEEEEETTSCEEEEEECCS-SC--EEEEEECTTSCEEEEEETTS------EEEEEETTSCE
T ss_pred CCCEEEEEcCC-------CEEEEEECCCCEEEEEcCCC-CC--EEEEEEcCCCCEEEEEeCCC------EEEEEcCCCCE
Confidence 45566665533 34677886554444443322 11 22333333777777766433 37777754332
Q ss_pred eEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEE
Q 048803 196 WASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYM 273 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~ 273 (289)
-..+..-. .....+. -++++++.|+.++ .|..||.....-..+.. .........+..+++.++
T Consensus 501 ~~~~~~h~---~~v~~l~~s~dg~~l~s~~~dg--------~v~lwd~~~~~~~~~~~----h~~~v~~~~fs~dg~~l~ 565 (577)
T 2ymu_A 501 LQTLTGHS---SSVRGVAFSPDGQTIASASDDK--------TVKLWNRNGQLLQTLTG----HSSSVWGVAFSPDGQTIA 565 (577)
T ss_dssp EEEEECCS---SCEEEEEECTTSSCEEEEETTS--------EEEEECTTSCEEEEEEC----CSSCEEEEEECTTSSCEE
T ss_pred EEEEeCCC---CCEEEEEEcCCCCEEEEEECcC--------EEEEEeCCCCEEEEEcC----CCCCEEEEEEcCCCCEEE
Confidence 22211100 1111111 2677777776542 58888865443333221 111111123346788777
Q ss_pred EeCcee
Q 048803 274 CREGDV 279 (289)
Q Consensus 274 ~GG~~~ 279 (289)
.||.|.
T Consensus 566 s~~~D~ 571 (577)
T 2ymu_A 566 SASSDK 571 (577)
T ss_dssp EEETTS
T ss_pred EEeCCC
Confidence 777654
No 211
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=86.01 E-value=0.64 Score=38.72 Aligned_cols=130 Identities=10% Similarity=0.114 Sum_probs=49.5
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCC--eEEeCCCCCCCC
Q 048803 81 YRITVLELGSGE--WSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISA--TWRRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~~ 156 (289)
..++++|..+++ |+.-. .+... ..+..++.+|+.++. ...++.+|..++ .|+.-...+. .
T Consensus 19 g~v~a~d~~tG~~~W~~~~---~~~~s-----~p~~~~g~~~v~~s~-------dg~l~a~d~~tG~~~w~~~~~~~~-~ 82 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE---DPVLQ-----VPTHVEEPAFLPDPN-------DGSLYTLGSKNNEGLTKLPFTIPE-L 82 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC---CCSCC-----CC-----CCEEECTT-------TCCEEEC-----CCSEECSCCHHH-H
T ss_pred CEEEEEECCCCCEEEEecC---CCcee-----cceEcCCCEEEEeCC-------CCEEEEEECCCCceeeeeeccCcc-c
Confidence 478899988776 65322 11111 223455667777542 245788898765 3653222110 0
Q ss_pred ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC--ceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcccc
Q 048803 157 RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD--EWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFER 234 (289)
Q Consensus 157 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~ 234 (289)
. ..+.+...++.||+ |+. ...+..+|++++ .|+.-..-. . ..+..++.||+ |+.+ .
T Consensus 83 ~-~~sp~~~~~~~v~~-g~~------dg~v~a~D~~tG~~~w~~~~~~~-~----~~~p~~~~v~~-~~~d--------g 140 (369)
T 2hz6_A 83 V-QASPCRSSDGILYM-GKK------QDIWYVIDLLTGEKQQTLSSAFA-D----SLSPSTSLLYL-GRTE--------Y 140 (369)
T ss_dssp H-TTCSCC-----CCC-CEE------EEEEEEECCC---------------------------EEE-EEEE--------E
T ss_pred c-ccCceEecCCEEEE-EeC------CCEEEEEECCCCcEEEEecCCCc-c----cccccCCEEEE-EecC--------C
Confidence 0 00111102455553 221 124888998876 475322110 0 11113445554 4332 2
Q ss_pred eEEEEECCCCc--eee
Q 048803 235 HAEAFDAAAQQ--WGP 248 (289)
Q Consensus 235 ~v~~yd~~~~~--W~~ 248 (289)
.+.++|+.+++ |+.
T Consensus 141 ~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 141 TITMYDTKTRELRWNA 156 (369)
T ss_dssp EEECCCSSSSSCCCEE
T ss_pred EEEEEECCCCCEEEeE
Confidence 58888987764 764
No 212
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=85.81 E-value=0.97 Score=37.60 Aligned_cols=107 Identities=9% Similarity=0.014 Sum_probs=44.5
Q ss_pred EEEeCCEEEEEeCcCCCCcccccceEEEEccCCe--EEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEE
Q 048803 112 LSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT--WRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAY 189 (289)
Q Consensus 112 ~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 189 (289)
.++.++.||+.+. ...++.+|..+++ |+.-. . ... +..++.++.+|+.++.+. .+..+
T Consensus 5 P~v~~~~v~~gs~--------dg~v~a~d~~tG~~~W~~~~--~-~~~---s~p~~~~g~~~v~~s~dg------~l~a~ 64 (369)
T 2hz6_A 5 VTLPETLLFVSTL--------DGSLHAVSKRTGSIKWTLKE--D-PVL---QVPTHVEEPAFLPDPNDG------SLYTL 64 (369)
T ss_dssp ---CTTEEEEEET--------TSEEEEEETTTCCEEEEEEC--C-CSC---CCC-----CCEEECTTTC------CEEEC
T ss_pred CeeeCCEEEEEcC--------CCEEEEEECCCCCEEEEecC--C-Cce---ecceEcCCCEEEEeCCCC------EEEEE
Confidence 3456677776532 2458889988875 76543 1 111 111223677888765333 48899
Q ss_pred EcCCC--ceEeCCCCCccccccceEE-ECCEEEEEeeecCCCCCcccceEEEEECCCCc--eee
Q 048803 190 DVARD--EWASLPDMSRERDECKAVF-HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGP 248 (289)
Q Consensus 190 d~~~~--~W~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~ 248 (289)
|.+++ .|..-...+... ..+.+. .++.||+ |+.+ ..+.++|+++++ |+.
T Consensus 65 d~~tG~~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~d--------g~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 65 GSKNNEGLTKLPFTIPELV-QASPCRSSDGILYM-GKKQ--------DIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp -----CCSEECSCCHHHHH-TTCSCC-----CCC-CEEE--------EEEEEECCC--------
T ss_pred ECCCCceeeeeeccCcccc-ccCceEecCCEEEE-EeCC--------CEEEEEECCCCcEEEEe
Confidence 98765 466322211111 112222 3555553 3332 358888988764 654
No 213
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=84.96 E-value=8.6 Score=35.06 Aligned_cols=133 Identities=10% Similarity=0.020 Sum_probs=70.4
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCC--CCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGAD--MPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....+.++++....-+.+.. +. .| .+.++. .++.||+..-.. ...++++++
T Consensus 463 ~~g~LY~tD~-------~~~~I~v~d~dg~~~~~l~~~~~~-~P---~giavDp~~g~ly~td~~~-----~~~I~~~~~ 526 (699)
T 1n7d_A 463 IHSNIYWTDS-------VLGTVSVADTKGVKRKTLFREQGS-KP---RAIVVDPVHGFMYWTDWGT-----PAKIKKGGL 526 (699)
T ss_dssp SSSBCEECCT-------TTSCEEEEBSSSCCEEEECCCSSC-CC---CCEECCSSSSCCEECCCSS-----SCCEEBCCS
T ss_pred eCCcEEEEec-------cCCeEEEEecCCCceEEEEeCCCC-Cc---ceEEEccCCCcEEEcccCC-----CCeEEEEeC
Confidence 4678888632 24568889887665444322 22 22 334442 267899874211 135777777
Q ss_pred CCCceEeCC--CCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASLP--DMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~~--~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
....-..+. .+..| .++++ .+++||+.-.. .+.|+++|+....-..+... .....++ .++++.
T Consensus 527 dG~~~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~--------~~~I~~~d~dG~~~~~~~~~-~~~~~~P-~glavd 593 (699)
T 1n7d_A 527 NGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILED-EKRLAHP-FSLAVF 593 (699)
T ss_dssp SSCCCCEESCSSCSSC---CCEEECTTTCCEEEEETT--------TTEEEEECSSSSCCEEECCC-SSSCSSC-CCCEEE
T ss_pred CCCCeeEEEeCCCCCc---cEEEEeccCCEEEEEecC--------CCeEEEEccCCCceEEEEec-CCcCCCc-eEeEEE
Confidence 643322221 12212 22333 25789987632 24789999876443333321 1111222 356666
Q ss_pred CCeEEEEeC
Q 048803 268 SNDLYMCRE 276 (289)
Q Consensus 268 ~~~ly~~GG 276 (289)
++.||+...
T Consensus 594 ~~~lywtd~ 602 (699)
T 1n7d_A 594 EDKVFWTDI 602 (699)
T ss_dssp TTEEEEECS
T ss_pred CCEEEEEeC
Confidence 788888853
No 214
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=84.94 E-value=16 Score=30.46 Aligned_cols=139 Identities=9% Similarity=0.060 Sum_probs=67.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.+||..+.+-...-..+. .... ...+.+ ++..++.|+.+ ..+.+||..+++....-.+.+.. .
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~-h~~~---v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~-~ 259 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSP-RHGA---VSSICIDEECCVLILGTTR-------GIIDIWDIRFNVLIRSWSFGDHA-P 259 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCG-GGCC---EEEEEECTTSCEEEEEETT-------SCEEEEETTTTEEEEEEBCTTCE-E
T ss_pred CeEEEEeCCCCeeeEEEccCC-CCCc---eEEEEECCCCCEEEEEcCC-------CeEEEEEcCCccEEEEEecCCCC-c
Confidence 578889998765432111110 1111 122222 56666666643 45888999887653321112111 1
Q ss_pred ceeEEE--ec--CCEEEEEcCCCCCCcccCceEEEEcCCCceEeC-C----CC------Ccc------------cc--cc
Q 048803 159 LFGCAS--DG--DRTVYVAGGHDEDKNALKSAMAYDVARDEWASL-P----DM------SRE------------RD--EC 209 (289)
Q Consensus 159 ~~~~~~--~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~----~~------~~~------------~~--~~ 209 (289)
....+. .+ ++.+.+.|+.+. .+..||..+.+-... . .. |.. +. -.
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~ 333 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSKT------FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALS 333 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTTE------EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred eEEEEeccccCCCccEEEEEcCCC------cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceE
Confidence 111211 11 344566655432 477788776542110 0 00 000 11 12
Q ss_pred ceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 210 KAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 210 ~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+.+..++++++.|+.++ .|..||..+.+
T Consensus 334 ~l~~~~~~~l~s~~~d~--------~i~~wd~~~~~ 361 (437)
T 3gre_A 334 TISVSNDKILLTDEATS--------SIVMFSLNELS 361 (437)
T ss_dssp CEEEETTEEEEEEGGGT--------EEEEEETTCGG
T ss_pred EEEECCceEEEecCCCC--------eEEEEECCCcc
Confidence 23344788888887653 58888887654
No 215
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.56 E-value=14 Score=29.42 Aligned_cols=167 Identities=9% Similarity=0.073 Sum_probs=80.0
Q ss_pred eEEEEECCCCCeEeCCCCCCCCCCCCceeEEE-EeCCEEEEEeCcCCCCcccccceEEEEccCCe---EEeCCC----CC
Q 048803 82 RITVLELGSGEWSELPPIPGFPDGLPLFCQLS-AVGPELVVIGGLDLTTWEASSSVFVFNIISAT---WRRGAD----MP 153 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~----~~ 153 (289)
.++.+|+.+++.+.+..++..+.. ...+ ..++.+|+... ....++++|+.+.+ |...+. .+
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~----~g~~~~~~~~~~v~d~-------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~ 164 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFL----NGITPLSDTQYLTADS-------YRGAIWLIDVVQPSGSIWLEHPMLARSNS 164 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCE----EEEEESSSSEEEEEET-------TTTEEEEEETTTTEEEEEEECGGGSCSST
T ss_pred eEEEEcCCCCeEEEEEeCCCcccc----CcccccCCCcEEEEEC-------CCCeEEEEeCCCCcEeEEEECCccccccc
Confidence 467788887777655444332211 1222 23456777532 24578899987642 211111 11
Q ss_pred -CCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC-CceEeCCCCCccccccceEE-ECCEEEEEeeecCCCCC
Q 048803 154 -GGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR-DEWASLPDMSRERDECKAVF-HCGKLLVIGGYSTNAQG 230 (289)
Q Consensus 154 -~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~-~~~~l~~~gG~~~~~~~ 230 (289)
.......+.+. .++.+|+.-. ....+.+||+.. .+......+........+++ -+|+||+.....
T Consensus 165 ~~~~~~pngis~-dg~~lyv~d~------~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~----- 232 (306)
T 2p4o_A 165 ESVFPAANGLKR-FGNFLYVSNT------EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIY----- 232 (306)
T ss_dssp TCCSCSEEEEEE-ETTEEEEEET------TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTT-----
T ss_pred cCCCCcCCCcCc-CCCEEEEEeC------CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCC-----
Confidence 01112233432 2568998732 234689999875 22211100000011122333 367888875321
Q ss_pred cccceEEEEECCCCceeecccccccCCCCCCceeeee-----CCeEEEEeCc
Q 048803 231 RFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD-----SNDLYMCREG 277 (289)
Q Consensus 231 ~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~-----~~~ly~~GG~ 277 (289)
+.|.+||++ ++-..+.....+ ...+. +++.. ++.||+....
T Consensus 233 ---~~V~~~~~~-G~~~~~~~~~~~-~~~p~-~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 233 ---NSVVRIAPD-RSTTIIAQAEQG-VIGST-AVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ---CCEEEECTT-CCEEEEECGGGT-CTTEE-EEEECCSTTTTTEEEEEECT
T ss_pred ---CeEEEECCC-CCEEEEeecccc-cCCce-EEEEecccCCCCEEEEECCC
Confidence 368999986 444333221111 12232 33321 2689998653
No 216
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=84.40 E-value=15 Score=29.95 Aligned_cols=131 Identities=13% Similarity=0.036 Sum_probs=74.2
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeC--CCCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRG--ADMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....++++++....-+.+ ..+. . ..+.++. .++.||+..-.. ...++++++
T Consensus 126 ~~g~ly~~d~-------~~~~I~~~~~dG~~~~~l~~~~l~-~---P~~iavdp~~g~ly~td~~~-----~~~I~r~~~ 189 (349)
T 3v64_C 126 VHDKLYWTDS-------GTSRIEVANLDGAHRKVLLWQSLE-K---PRAIALHPMEGTIYWTDWGN-----TPRIEASSM 189 (349)
T ss_dssp TTTEEEEEET-------TTTEEEEEETTSCSCEEEECTTCS-C---EEEEEEETTTTEEEEEECSS-----SCEEEEEET
T ss_pred CCCeEEEEcC-------CCCeEEEEcCCCCceEEEEeCCCC-C---cceEEEecCcCeEEEeccCC-----CCEEEEEeC
Confidence 4789998843 245688888865442322 2222 1 2445554 378999984321 246899998
Q ss_pred CCCceEeCCC--CCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASLPD--MSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~~~--~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
....-+.+.. +..| .+.++ .+++||+.-.. .+.|+++|++...=..+... ...++ .++++.
T Consensus 190 dG~~~~~~~~~~~~~P---nGla~d~~~~~lY~aD~~--------~~~I~~~~~dG~~~~~~~~~---~~~~P-~giav~ 254 (349)
T 3v64_C 190 DGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVDAK--------HHVIERANLDGSHRKAVISQ---GLPHP-FAITVF 254 (349)
T ss_dssp TSCSCEESCCSSCSCE---EEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECS---SCSSE-EEEEEE
T ss_pred CCCCcEEEEECCCCCc---ceEEEeCCCCEEEEEECC--------CCEEEEEeCCCCceEEEEeC---CCCCc-eEEEEE
Confidence 7654444322 2112 23333 37899998532 24799999875432332221 11222 356668
Q ss_pred CCeEEEEeC
Q 048803 268 SNDLYMCRE 276 (289)
Q Consensus 268 ~~~ly~~GG 276 (289)
++.||+..-
T Consensus 255 ~~~ly~td~ 263 (349)
T 3v64_C 255 EDSLYWTDW 263 (349)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEecC
Confidence 999999864
No 217
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=84.33 E-value=23 Score=31.83 Aligned_cols=156 Identities=12% Similarity=0.036 Sum_probs=77.2
Q ss_pred ceeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE--eCCE-EEEEeCcCCCCcccccceEEEEccCC-eEEeCCCCCCC
Q 048803 80 VYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA--VGPE-LVVIGGLDLTTWEASSSVFVFNIISA-TWRRGADMPGG 155 (289)
Q Consensus 80 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~-lyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~ 155 (289)
...++++|..+++-..+........ ....+. -+++ |++. ..+.. .....++++|..++ ..+.+......
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~----~~~~~~~spdg~~l~~~-~~~~~--~~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEK----FLTNLSWSPDENILYVA-EVNRA--QNECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTC----EEEEEEECTTSSEEEEE-EECTT--SCEEEEEEEETTTCCEEEEEEEEECS
T ss_pred eeEEEEEECCCCceEeeccCCCCce----eEeeEEEECCCCEEEEE-EeCCC--CCeeEEEEEECCCCceeeEEEEccCC
Confidence 3679999999887665543211111 112222 2444 5543 33221 13457899999988 66554321101
Q ss_pred Cc--cceeEEEec--CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECC-EEEEEeeecCCCCC
Q 048803 156 RR--MLFGCASDG--DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCG-KLLVIGGYSTNAQG 230 (289)
Q Consensus 156 ~~--~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~l~~~gG~~~~~~~ 230 (289)
.. .....+..- ++++++.+..+. ...++.+|........+..-...........-++ .|++.+..+..
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~--- 379 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASP--- 379 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCT---
T ss_pred CeECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCC---
Confidence 00 011233334 677666554332 2457788876666666643221111101111244 56665543221
Q ss_pred cccceEEEEECCCCceeecc
Q 048803 231 RFERHAEAFDAAAQQWGPVE 250 (289)
Q Consensus 231 ~~~~~v~~yd~~~~~W~~~~ 250 (289)
....++.+|..+++...+.
T Consensus 380 -~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 380 -LERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp -TCBEEEEEETTCCCCEESC
T ss_pred -ceEEEEEEEcCCCCceecc
Confidence 1236888898887765554
No 218
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=83.90 E-value=5.6 Score=33.46 Aligned_cols=63 Identities=11% Similarity=0.197 Sum_probs=33.3
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCCc-eEeCCCCCccccccceEEE--CC-EEEEEeeecCCCCCcccceEEEEECC
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARDE-WASLPDMSRERDECKAVFH--CG-KLLVIGGYSTNAQGRFERHAEAFDAA 242 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~--~~-~l~~~gG~~~~~~~~~~~~v~~yd~~ 242 (289)
++.+++.|+.+. .+.+||+.+.. ...+..+.........+.+ ++ .+++.|+.++ .|.+||..
T Consensus 243 ~~~~l~s~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg--------~v~vwd~~ 308 (430)
T 2xyi_A 243 HESLFGSVADDQ------KLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK--------TVALWDLR 308 (430)
T ss_dssp CTTEEEEEETTS------EEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS--------EEEEEETT
T ss_pred CCCEEEEEeCCC------eEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC--------eEEEEeCC
Confidence 456777765443 48899988652 1111111111111122222 23 4788887653 68999987
Q ss_pred C
Q 048803 243 A 243 (289)
Q Consensus 243 ~ 243 (289)
+
T Consensus 309 ~ 309 (430)
T 2xyi_A 309 N 309 (430)
T ss_dssp C
T ss_pred C
Confidence 6
No 219
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=83.78 E-value=25 Score=31.82 Aligned_cols=148 Identities=10% Similarity=0.029 Sum_probs=78.0
Q ss_pred eeEEEEECCC------C--CeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCC---eEEeC
Q 048803 81 YRITVLELGS------G--EWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISA---TWRRG 149 (289)
Q Consensus 81 ~~~~~~d~~~------~--~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~---~W~~~ 149 (289)
..++++|..+ . .++.+..-.... .......++.||+.+..+. ....++++|..+. .|+.+
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILKWVKLIDNFEGE-----YDYVTNEGTVFTFKTNRHS----PNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-----EEEEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEE
T ss_pred cEEEEEECcccccccCCccceEEeeCCCCcE-----EEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCCcccceec
Confidence 6788899875 3 466554321111 1233445778888865431 2457889998775 48776
Q ss_pred CCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc-eEeCCCCCccccccceEEE--CC-EEEEEeeec
Q 048803 150 ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE-WASLPDMSRERDECKAVFH--CG-KLLVIGGYS 225 (289)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~--~~-~l~~~gG~~ 225 (289)
.+-. ........+..-++.+++....+. ...++.+|+.+++ ...+. .+.. ....+.. ++ .+++.....
T Consensus 330 ~~~~-~~~~~~~~~~~~~~~lv~~~~~~g----~~~l~~~~~~~g~~~~~l~-~~~~--~v~~~~~s~d~~~l~~~~ss~ 401 (710)
T 2xdw_A 330 VPEH-EKDVLEWVACVRSNFLVLCYLHDV----KNTLQLHDLATGALLKIFP-LEVG--SVVGYSGQKKDTEIFYQFTSF 401 (710)
T ss_dssp ECCC-SSCEEEEEEEETTTEEEEEEEETT----EEEEEEEETTTCCEEEEEC-CCSS--EEEEEECCTTCSEEEEEEECS
T ss_pred cCCC-CCCeEEEEEEEcCCEEEEEEEECC----EEEEEEEECCCCCEEEecC-CCCc--eEEEEecCCCCCEEEEEEeCC
Confidence 4332 111222333322677777654332 2458889986654 34443 2211 1111222 33 455443221
Q ss_pred CCCCCcccceEEEEECCCCc--eeecc
Q 048803 226 TNAQGRFERHAEAFDAAAQQ--WGPVE 250 (289)
Q Consensus 226 ~~~~~~~~~~v~~yd~~~~~--W~~~~ 250 (289)
.. -..++.||..+++ .+.+.
T Consensus 402 ~~-----P~~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 402 LS-----PGIIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp SC-----CCEEEEEETTSSSCCCEEEE
T ss_pred CC-----CCEEEEEECCCCccceEEee
Confidence 11 2468999998877 55443
No 220
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=83.66 E-value=18 Score=30.21 Aligned_cols=132 Identities=10% Similarity=0.034 Sum_probs=74.3
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCC--CCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGA--DMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....++++++....-+.+. .+. . ..+.++. .++.||+.--.. ...++.+++
T Consensus 169 ~~~~lY~~d~-------~~~~I~~~~~~g~~~~~l~~~~~~-~---P~~iavdp~~g~ly~td~~~-----~~~I~~~~~ 232 (400)
T 3p5b_L 169 IHSNIYWTDS-------VLGTVSVADTKGVKRKTLFRENGS-K---PRAIVVDPVHGFMYWTDWGT-----PAKIKKGGL 232 (400)
T ss_dssp TTTEEEEEET-------TTTEEEEECTTTCSEEEEEECSSC-C---EEEEEEETTTTEEEEEECSS-----SCCEEEEET
T ss_pred cCCceEEEEC-------CCCeEEEEeCCCCceEEEEeCCCC-C---cceEEEecccCeEEEEeCCC-----CCEEEEEeC
Confidence 4789998853 2456888888766544332 222 1 2445553 378999984211 135888888
Q ss_pred CCCceEeC-C-CCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASL-P-DMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~-~-~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
....=..+ . .+..| .+.++ .+++||+.-.. .+.|+++|.+...-..+... .....++ .++++.
T Consensus 233 dG~~~~~~~~~~l~~P---~glavd~~~~~lY~aD~~--------~~~I~~~d~dG~~~~~~~~~-~~~l~~P-~gl~v~ 299 (400)
T 3p5b_L 233 NGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILED-EKRLAHP-FSLAVF 299 (400)
T ss_dssp TSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETT--------TTEEEEEETTSCCCEEEEEC-SSTTSSE-EEEEEE
T ss_pred CCCccEEEEECCCCce---EEEEEEeCCCEEEEEECC--------CCEEEEEeCCCCccEEEEeC-CCCCCCC-EEEEEe
Confidence 75432222 1 22222 22333 36889998532 24799999876544443321 1111222 367778
Q ss_pred CCeEEEEe
Q 048803 268 SNDLYMCR 275 (289)
Q Consensus 268 ~~~ly~~G 275 (289)
++.||+..
T Consensus 300 ~~~lywtd 307 (400)
T 3p5b_L 300 EDKVFWTD 307 (400)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEec
Confidence 99999986
No 221
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.54 E-value=6.6 Score=34.52 Aligned_cols=134 Identities=17% Similarity=0.164 Sum_probs=69.9
Q ss_pred EEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeE
Q 048803 83 ITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGC 162 (289)
Q Consensus 83 ~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~ 162 (289)
..+||..+++-+.+...+. . .....-+++.+++++.+.. ....++++|..+++.+.+.... .. ....
T Consensus 134 ~~l~d~~~g~~~~l~~~~~----~---~~~~spDG~~la~~~~~~~---~~~~i~~~d~~~g~~~~l~~~~-~~--~~~~ 200 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG----F---GFVSDIRGDLIAGLGFFGG---GRVSLFTSNLSSGGLRVFDSGE-GS--FSSA 200 (582)
T ss_dssp EEEEEEETTEEEEEEEESS----C---EEEEEEETTEEEEEEEEET---TEEEEEEEETTTCCCEEECCSS-CE--EEEE
T ss_pred ceEEEccCCcEEEeecCCC----c---eEEECCCCCEEEEEEEcCC---CCeEEEEEcCCCCCceEeecCC-Cc--cccc
Confidence 3367887776665543222 1 1233344544444443222 1245999999999888765433 11 2233
Q ss_pred EEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccc-------eEEECCEEEEEeeecCCCCCcccce
Q 048803 163 ASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECK-------AVFHCGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 163 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-------~~~~~~~l~~~gG~~~~~~~~~~~~ 235 (289)
+..-+|+..+.+..+. ...++.+|+++++...+........... ...-+|++++.+..++ .
T Consensus 201 ~~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g--------~ 268 (582)
T 3o4h_A 201 SISPGMKVTAGLETAR----EARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG--------R 268 (582)
T ss_dssp EECTTSCEEEEEECSS----CEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT--------E
T ss_pred eECCCCCEEEEccCCC----eeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC--------c
Confidence 3323666555332221 2468999999988773332221111111 0233677777766542 4
Q ss_pred EEEEEC
Q 048803 236 AEAFDA 241 (289)
Q Consensus 236 v~~yd~ 241 (289)
+..|+.
T Consensus 269 ~~l~~~ 274 (582)
T 3o4h_A 269 SAVFID 274 (582)
T ss_dssp EEEEET
T ss_pred EEEEEE
Confidence 677777
No 222
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=83.32 E-value=25 Score=31.58 Aligned_cols=103 Identities=16% Similarity=0.201 Sum_probs=52.1
Q ss_pred EEEEEeCcCCCCcccccceEEEEccCCeEEe-CCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 118 ELVVIGGLDLTTWEASSSVFVFNIISATWRR-GADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 118 ~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
.+++.|+.+ ..+.+||..+.+-.. +.... ....+++..-++.+.+.|+.+. .+..+|..+.+-
T Consensus 532 ~~l~s~s~d-------~~v~vwd~~~~~~~~~~~~h~---~~v~~v~~spdg~~l~sg~~Dg------~i~iwd~~~~~~ 595 (694)
T 3dm0_A 532 PTIVSASWD-------KTVKVWNLSNCKLRSTLAGHT---GYVSTVAVSPDGSLCASGGKDG------VVLLWDLAEGKK 595 (694)
T ss_dssp CEEEEEETT-------SCEEEEETTTCCEEEEECCCS---SCEEEEEECTTSSEEEEEETTS------BCEEEETTTTEE
T ss_pred ceEEEEeCC-------CeEEEEECCCCcEEEEEcCCC---CCEEEEEEeCCCCEEEEEeCCC------eEEEEECCCCce
Confidence 355555533 457889988766432 22111 1122333333777888877554 488889887643
Q ss_pred EeCCCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 197 ASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
. ..+.....-.+.+...+..++.++.+ +.|.+||..+++-
T Consensus 596 ~--~~~~~~~~v~~~~~sp~~~~l~~~~~--------~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 596 L--YSLEANSVIHALCFSPNRYWLCAATE--------HGIKIWDLESKSI 635 (694)
T ss_dssp E--ECCBCSSCEEEEEECSSSSEEEEEET--------TEEEEEETTTTEE
T ss_pred E--EEecCCCcEEEEEEcCCCcEEEEEcC--------CCEEEEECCCCCC
Confidence 2 12221111122222223333444432 2588889877653
No 223
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.23 E-value=18 Score=29.91 Aligned_cols=146 Identities=10% Similarity=0.090 Sum_probs=73.2
Q ss_pred eEEEEECCC--CCeEeCCCCCCCCCCCCceeEEEEe---CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCC---C
Q 048803 82 RITVLELGS--GEWSELPPIPGFPDGLPLFCQLSAV---GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADM---P 153 (289)
Q Consensus 82 ~~~~~d~~~--~~W~~~~~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~---~ 153 (289)
-+++++... .+|+...+.+... ...+++.. .+.||+.+... . ....+++.+....+|+.+... +
T Consensus 32 Gl~~~~~~~~g~~W~~~~~~~~~~----~v~~i~~dp~~~~~l~~g~~~g-~---~g~gl~~s~D~G~tW~~~~~~~~~~ 103 (394)
T 3b7f_A 32 GAWFLASDPARRTWELRGPVFLGH----TIHHIVQDPREPERMLMAARTG-H---LGPTVFRSDDGGGNWTEATRPPAFN 103 (394)
T ss_dssp EEEEEEECTTSCSEEEEEEESTTS----EEEEEEECSSSTTCEEEEEEC------CCEEEEEESSTTSCCEECSBCCCCC
T ss_pred ceEEEECCCCCCCceECCccCCCC----ceEEEEECCCCCCeEEEEecCC-C---CCccEEEeCCCCCCceECCccccCC
Confidence 356677655 6898763211111 11233333 46788764321 0 112477776667889987532 2
Q ss_pred CCC------c--cceeEEEec---CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCC---Ccc--------------
Q 048803 154 GGR------R--MLFGCASDG---DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDM---SRE-------------- 205 (289)
Q Consensus 154 ~~~------~--~~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---~~~-------------- 205 (289)
... . ...+.+... .+.||+.+. ...+++.+-...+|+.+... |..
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEE-------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEec-------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCC
Confidence 111 0 111233221 467777532 12366666667789987432 210
Q ss_pred ccccceEEE---CCEEEEEeeecCCCCCcccceEEEEECCCCceeeccc
Q 048803 206 RDECKAVFH---CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 206 ~~~~~~~~~---~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
...+.+++- .+.||+.... ..++..+-...+|+.+..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~---------ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSS---------GGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEET---------BEEEEESSTTSSCEECCT
T ss_pred CceeEEEECCCCCCEEEEEECC---------CCEEEECCCCCCceECCC
Confidence 011122221 2567765432 247777777889998854
No 224
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=82.28 E-value=16 Score=28.67 Aligned_cols=29 Identities=14% Similarity=0.231 Sum_probs=20.1
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCC-ceeeccc
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQ-QWGPVEE 251 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~-~W~~~~~ 251 (289)
++++++.|+.++ .|.+||..++ .|..+..
T Consensus 317 ~~~~l~s~~~dg--------~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 317 TGTILSSAGDDG--------KVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp SSCCEEEEETTS--------CEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEecCCC--------cEEEEecCcCcchhheee
Confidence 577777777653 5888888764 6776655
No 225
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=82.07 E-value=29 Score=31.32 Aligned_cols=180 Identities=9% Similarity=0.032 Sum_probs=83.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCC------cccccceEEEEccCCeE--EeCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTT------WEASSSVFVFNIISATW--RRGADM 152 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~------~~~~~~~~~yd~~t~~W--~~~~~~ 152 (289)
..++++|..+++......++...... ..-+-+++.++++..+..+ .....++++++..++.- +.+...
T Consensus 147 ~~i~v~dl~tg~~~~~~~~~~~~~~~----~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~ 222 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKVDVIEGGKYAT----PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER 222 (695)
T ss_dssp CEEEEEETTTCCBCSSCCBSCCTTCC----CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCcCCcccCcccccc----eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec
Confidence 57889999988754111222211011 1223345544444432210 01245688999887652 222222
Q ss_pred CCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEECCEEEEEeeecCCCCCcc
Q 048803 153 PGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQGRF 232 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~ 232 (289)
+.......+.+..-+|+..++...... ....++.+|..+..|..+....... ...+.-+|++|+....+. .
T Consensus 223 ~~~~~~~~~~~~SpDG~~l~~~~~~~~--~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~~-----~ 293 (695)
T 2bkl_A 223 TGDPTTFLQSDLSRDGKYLFVYILRGW--SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEGA-----P 293 (695)
T ss_dssp CCCTTCEEEEEECTTSCCEEEEEEETT--TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTTC-----T
T ss_pred CCCCEEEEEEEECCCCCEEEEEEeCCC--CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCCC-----C
Confidence 211222233443335654444332221 2245777777677777664322211 122234677555433221 1
Q ss_pred cceEEEEECCCCc---eeecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 233 ERHAEAFDAAAQQ---WGPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 233 ~~~v~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
...|..+|.++.. |..+.... .......+...+++|++...
T Consensus 294 ~~~l~~~d~~~~~~~~~~~l~~~~---~~~~l~~~~~~~~~lv~~~~ 337 (695)
T 2bkl_A 294 RQRVFEVDPAKPARASWKEIVPED---SSASLLSVSIVGGHLSLEYL 337 (695)
T ss_dssp TCEEEEEBTTBCSGGGCEEEECCC---SSCEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEeCCCCCccCCeEEecCC---CCCeEEEEEEECCEEEEEEE
Confidence 2468999987754 77765321 01111123334777766653
No 226
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=81.69 E-value=19 Score=28.90 Aligned_cols=133 Identities=10% Similarity=0.033 Sum_probs=73.8
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeC-C-CCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRG-A-DMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~-~-~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....+.++|+....-+.+ . .+. . ..+.++. .++.||+..... ...++.+++
T Consensus 87 ~~~~ly~~d~-------~~~~I~~~~~~g~~~~~~~~~~~~-~---P~~iavdp~~g~ly~~d~~~-----~~~I~~~~~ 150 (316)
T 1ijq_A 87 IHSNIYWTDS-------VLGTVSVADTKGVKRKTLFRENGS-K---PRAIVVDPVHGFMYWTDWGT-----PAKIKKGGL 150 (316)
T ss_dssp TTTEEEEEET-------TTTEEEEEETTSSSEEEEEECTTC-C---EEEEEEETTTTEEEEEECSS-----SCEEEEEET
T ss_pred cCCeEEEEEC-------CCCEEEEEeCCCCceEEEEECCCC-C---cceEEeCCCCCEEEEEccCC-----CCeEEEEcC
Confidence 4789999843 245688898876543322 2 222 1 2445554 378999985211 236888888
Q ss_pred CCCceEeCC--CCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASLP--DMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~~--~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
....=+.+. .+..| .+.++- +++||+.-.. .+.|+++|.+...=+.+... .....++ .++++.
T Consensus 151 dG~~~~~~~~~~~~~P---~gla~d~~~~~lY~~D~~--------~~~I~~~d~dg~~~~~~~~~-~~~~~~P-~giav~ 217 (316)
T 1ijq_A 151 NGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILED-EKRLAHP-FSLAVF 217 (316)
T ss_dssp TSCCEEEEECSSCSCE---EEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEEEC-TTTTSSE-EEEEEE
T ss_pred CCCCeEEEEECCCCCc---eEEEEeccCCEEEEEECC--------CCeEEEEecCCCceEEEeec-CCccCCc-EEEEEE
Confidence 654333321 22211 233332 6889988533 24799999875433333221 0111222 356667
Q ss_pred CCeEEEEeC
Q 048803 268 SNDLYMCRE 276 (289)
Q Consensus 268 ~~~ly~~GG 276 (289)
++.||+..-
T Consensus 218 ~~~ly~~d~ 226 (316)
T 1ijq_A 218 EDKVFWTDI 226 (316)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEEC
Confidence 899998863
No 227
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=81.57 E-value=22 Score=30.78 Aligned_cols=133 Identities=10% Similarity=0.062 Sum_probs=60.8
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+++.++.|+.+ ..+.+||.....-..+.... .. ..+.+..-+++..+.|+.+. .+..||.....
T Consensus 355 ~g~~l~~~~~d-------g~v~~~~~~~~~~~~~~~~~-~~--v~~~~~s~dg~~l~~~~~d~------~v~~~~~~~~~ 418 (577)
T 2ymu_A 355 DGQTIASASDD-------KTVKLWNRNGQLLQTLTGHS-SS--VRGVAFSPDGQTIASASDDK------TVKLWNRNGQL 418 (577)
T ss_dssp TSSEEEEEETT-------SEEEEEETTCCEEEEEECCS-SC--EEEEEECTTSSCEEEEETTS------EEEEECTTCCE
T ss_pred CCCEEEEEeCC-------CEEEEEcCCCCEEEEecCCC-CC--eEEEEECCCCCEEEEEeCCC------EEEEEeCCCCE
Confidence 45566666532 34667786544444333222 11 22333333666666665432 36777754332
Q ss_pred eEeCCCCCccccccceE-EECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEE
Q 048803 196 WASLPDMSRERDECKAV-FHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMC 274 (289)
Q Consensus 196 W~~~~~~~~~~~~~~~~-~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~ 274 (289)
-..+.....+. .+.+ .-+++.++.++.++ .+..||.....-..+... ........+..++++++.
T Consensus 419 ~~~~~~~~~~v--~~~~~s~d~~~l~~~~~d~--------~v~~w~~~~~~~~~~~~~----~~~v~~~~~spd~~~las 484 (577)
T 2ymu_A 419 LQTLTGHSSSV--WGVAFSPDDQTIASASDDK--------TVKLWNRNGQLLQTLTGH----SSSVRGVAFSPDGQTIAS 484 (577)
T ss_dssp EEEEECCSSCE--EEEEECTTSSEEEEEETTS--------EEEEEETTSCEEEEEECC----SSCEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCe--EEEEECCCCCEEEEEcCCC--------EEEEEECCCCEEEEEcCC----CCCEEEEEEcCCCCEEEE
Confidence 22221111110 1111 12667777766542 578888755443333221 111111223346777777
Q ss_pred eCce
Q 048803 275 REGD 278 (289)
Q Consensus 275 GG~~ 278 (289)
|+.|
T Consensus 485 ~~~d 488 (577)
T 2ymu_A 485 ASDD 488 (577)
T ss_dssp EETT
T ss_pred EeCC
Confidence 6644
No 228
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=81.19 E-value=21 Score=29.17 Aligned_cols=139 Identities=15% Similarity=0.132 Sum_probs=68.6
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCe---EEeCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISAT---WRRGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.+.+||.+... ...++++++.... |-.-.+.........+.+..-++ .|++..+ . ..+..||+
T Consensus 147 ~GnaYVt~s~~------~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~------g~L~~fD~ 213 (334)
T 2p9w_A 147 DGNSYVAFALG------MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P------RALTAFDV 213 (334)
T ss_dssp TSCEEEEEEES------SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S------SSEEEEEC
T ss_pred CCCEEEeCCCC------CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C------CeEEEEcC
Confidence 57899986532 1568999987543 54322222123334466654355 5566544 2 24899998
Q ss_pred CCCceEeCCC--------CCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeeccccc--ccC-CCCC
Q 048803 192 ARDEWASLPD--------MSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDF--MET-ATCP 260 (289)
Q Consensus 192 ~~~~W~~~~~--------~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~--~~~-~~~~ 260 (289)
.+-...+++- +..+ ......-.+|++.++.... +.+..+-...+ |+...... +.. ....
T Consensus 214 ~~pv~~~v~~~~~G~~~~~~~~-dgilp~~~~G~vllV~~~~--------~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g 283 (334)
T 2p9w_A 214 SKPYAWPEPVKINGDFGTLSGT-EKIVTVPVGNESVLVGARA--------PYAISFRSWDN-WKSANIKKTKRSELQNSG 283 (334)
T ss_dssp SSSSCCCEECEESSCCCCCTTE-EEEEEEEETTEEEEEEEET--------TEEEEEECSST-TSEEEEEEEECGGGGSSC
T ss_pred CCCcceeecccccCCcccccCc-ccccccccCCEEEEEEcCC--------CCEEEEECCCC-cceeEEeeeecCccccCc
Confidence 8432201110 1100 1111223689986665432 12344444334 97654321 111 1122
Q ss_pred Cceeee----eCCeEEEEeCc
Q 048803 261 RSCAGV----DSNDLYMCREG 277 (289)
Q Consensus 261 ~~~~~~----~~~~ly~~GG~ 277 (289)
....++ .+++||++.++
T Consensus 284 ~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 284 FTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEEEEEETTEEEEEEEECC
T ss_pred eeEEEEeccccCCeEEEEeee
Confidence 222223 68999999763
No 229
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=80.90 E-value=21 Score=29.09 Aligned_cols=111 Identities=7% Similarity=-0.036 Sum_probs=60.2
Q ss_pred EeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCC--CCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 114 AVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGA--DMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 114 ~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.-++..++.++.+... ...++.+|.......... .+........+++..-++++.+.|+.+. .+..||.
T Consensus 228 spdg~~l~~~s~d~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~------~V~iwd~ 298 (365)
T 4h5i_A 228 IADDTVLIAASLKKGK---GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN------SIALVKL 298 (365)
T ss_dssp EETTEEEEEEEESSSC---CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS------CEEEEET
T ss_pred cCCCCEEEEEecCCcc---eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC------EEEEEEC
Confidence 3467777777654322 234667777666553321 1111111122333334788888887654 4889998
Q ss_pred CCCceEeCCCCCcccccc-ceEE--ECCEEEEEeeecCCCCCcccceEEEEECCC
Q 048803 192 ARDEWASLPDMSRERDEC-KAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAA 243 (289)
Q Consensus 192 ~~~~W~~~~~~~~~~~~~-~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~ 243 (289)
++.+= +..+...+... ..+. -++++++.|+.++ .|.++|+..
T Consensus 299 ~~~~~--~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~--------tvrvw~ip~ 343 (365)
T 4h5i_A 299 KDLSM--SKIFKQAHSFAITEVTISPDSTYVASVSAAN--------TIHIIKLPL 343 (365)
T ss_dssp TTTEE--EEEETTSSSSCEEEEEECTTSCEEEEEETTS--------EEEEEECCT
T ss_pred CCCcE--EEEecCcccCCEEEEEECCCCCEEEEEeCCC--------eEEEEEcCC
Confidence 87642 22222233222 1222 2788888887653 688888743
No 230
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=79.42 E-value=22 Score=28.27 Aligned_cols=135 Identities=9% Similarity=0.106 Sum_probs=63.6
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeE-EeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATW-RRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++..++.|+.+ ..+.+||..+++- ..+.... ....+++..-++.+.+.|+.+. .+..+|....
T Consensus 76 dg~~l~s~s~D-------~~v~~wd~~~~~~~~~~~~h~---~~v~~~~~~~~~~~l~s~s~D~------~i~vwd~~~~ 139 (319)
T 3frx_A 76 DGAYALSASWD-------KTLRLWDVATGETYQRFVGHK---SDVMSVDIDKKASMIISGSRDK------TIKVWTIKGQ 139 (319)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECCS---SCEEEEEECTTSCEEEEEETTS------CEEEEETTSC
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCCeeEEEccCC---CcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCC
Confidence 45566666643 4578899988763 2222211 1122333333667777777654 3777887654
Q ss_pred ceEeCCCCCccccccceEE-------ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 195 EWASLPDMSRERDECKAVF-------HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 195 ~W~~~~~~~~~~~~~~~~~-------~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
.-..+..-.... ..... -++.+++.|+.++ .|..||..+.+-.. .. ..............
T Consensus 140 ~~~~~~~h~~~v--~~~~~~~~~~~~~~~~~l~s~~~d~--------~i~~wd~~~~~~~~--~~-~~h~~~v~~~~~sp 206 (319)
T 3frx_A 140 CLATLLGHNDWV--SQVRVVPNEKADDDSVTIISAGNDK--------MVKAWNLNQFQIEA--DF-IGHNSNINTLTASP 206 (319)
T ss_dssp EEEEECCCSSCE--EEEEECCC------CCEEEEEETTS--------CEEEEETTTTEEEE--EE-CCCCSCEEEEEECT
T ss_pred eEEEEeccCCcE--EEEEEccCCCCCCCccEEEEEeCCC--------EEEEEECCcchhhe--ee-cCCCCcEEEEEEcC
Confidence 322221111000 00111 1233566666542 58889987654321 11 01111111122335
Q ss_pred CCeEEEEeCcee
Q 048803 268 SNDLYMCREGDV 279 (289)
Q Consensus 268 ~~~ly~~GG~~~ 279 (289)
++++++.|+.|+
T Consensus 207 ~g~~l~s~~~dg 218 (319)
T 3frx_A 207 DGTLIASAGKDG 218 (319)
T ss_dssp TSSEEEEEETTC
T ss_pred CCCEEEEEeCCC
Confidence 677777777553
No 231
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=79.18 E-value=35 Score=30.56 Aligned_cols=64 Identities=13% Similarity=0.045 Sum_probs=34.6
Q ss_pred CceEEEEcCCCceEeCCCCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCC-ceeecc
Q 048803 184 KSAMAYDVARDEWASLPDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQ-QWGPVE 250 (289)
Q Consensus 184 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~-~W~~~~ 250 (289)
..+..+|+.+++-..+............+. -+|+..+++..+... ....+..+|+.++ +...+.
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~---~~~~v~~~d~~~g~~~~~~~ 301 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ---NECKVNAYDAETGRFVRTLF 301 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS---CEEEEEEEETTTCCEEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC---CeeEEEEEECCCCceeeEEE
Confidence 468899998887655543211111112222 266644444443211 2247889999888 666554
No 232
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=79.04 E-value=23 Score=28.37 Aligned_cols=104 Identities=11% Similarity=0.047 Sum_probs=57.1
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
++..++.|+.+ ..+.+||..+++-........ ......++..-++.+++.|+.+. .+..||..+.+
T Consensus 138 ~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~-~~~i~~~~~~pdg~~lasg~~dg------~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAKS-DVEYSSGVLHKDSLLLALYSPDG------ILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETT-------CCEEEEESSSSCEEEEECCCS-SCCCCEEEECTTSCEEEEECTTS------CEEEEESSCTT
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcEEEEEecCC-CCceEEEEECCCCCEEEEEcCCC------EEEEEECCCCC
Confidence 44566666633 457889988877543322221 11123344334788888887654 48999998764
Q ss_pred eE--eCCCCCccccc-cceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 196 WA--SLPDMSRERDE-CKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 196 W~--~~~~~~~~~~~-~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
-. .+ ...+.. ...+.+ +++.++.|+ + +.|..||..+.+
T Consensus 204 ~~~~~~---~~~h~~~v~~l~fs~~g~~l~s~~-~--------~~v~iwd~~~~~ 246 (343)
T 3lrv_A 204 QASSRF---PVDEEAKIKEVKFADNGYWMVVEC-D--------QTVVCFDLRKDV 246 (343)
T ss_dssp SCCEEC---CCCTTSCEEEEEECTTSSEEEEEE-S--------SBEEEEETTSST
T ss_pred CCccEE---eccCCCCEEEEEEeCCCCEEEEEe-C--------CeEEEEEcCCCC
Confidence 32 22 111111 112222 566666666 3 158999987764
No 233
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=78.81 E-value=22 Score=31.48 Aligned_cols=106 Identities=16% Similarity=0.191 Sum_probs=54.7
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
++++++.|+.+ ..+.+||..+.....+....+ .....+++..-+++..+.|+.+. .+..||..+.
T Consensus 459 dg~~lasgs~D-------~~v~lwd~~~~~~~~~~~~~h-~~~v~~v~fspdg~~las~s~d~------~v~~w~~~~~- 523 (611)
T 1nr0_A 459 DKQFVAVGGQD-------SKVHVYKLSGASVSEVKTIVH-PAEITSVAFSNNGAFLVATDQSR------KVIPYSVANN- 523 (611)
T ss_dssp TSCEEEEEETT-------SEEEEEEEETTEEEEEEEEEC-SSCEEEEEECTTSSEEEEEETTS------CEEEEEGGGT-
T ss_pred CCCEEEEeCCC-------CeEEEEEccCCceeeeeccCC-CCceEEEEECCCCCEEEEEcCCC------CEEEEEcCCC-
Confidence 34555555532 457788887766543322111 11122333333777777766543 3778887752
Q ss_pred eEeCCC-CCcccccc-ceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCC
Q 048803 196 WASLPD-MSRERDEC-KAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQ 244 (289)
Q Consensus 196 W~~~~~-~~~~~~~~-~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~ 244 (289)
.+.+.. ....+... ..+. -+++.++.|+.++ .|..||.++.
T Consensus 524 ~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~--------~v~lW~~~~~ 568 (611)
T 1nr0_A 524 FELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN--------SVIVWNMNKP 568 (611)
T ss_dssp TEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTCT
T ss_pred CceeeeeeeeecccceeEEEECCCCCEEEEEECCC--------cEEEEECCCc
Confidence 111221 11112211 1122 3788888887653 5888898764
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=78.52 E-value=21 Score=27.51 Aligned_cols=164 Identities=15% Similarity=0.045 Sum_probs=83.2
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..+.++|+....-..+.. ... ..+ ..++.. ++.||+... ....+.++++....-+.+.... ...
T Consensus 58 ~~I~~~~~~g~~~~~~~~--~~~-~~p--~~ia~d~~~~~lyv~d~-------~~~~I~~~~~~g~~~~~~~~~~--~~~ 123 (267)
T 1npe_A 58 PSIGRASLHGGEPTTIIR--QDL-GSP--EGIALDHLGRTIFWTDS-------QLDRIEVAKMDGTQRRVLFDTG--LVN 123 (267)
T ss_dssp TEEEEEESSSCCCEEEEC--TTC-CCE--EEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECSS--CSS
T ss_pred CEEEEEecCCCCcEEEEE--CCC-CCc--cEEEEEecCCeEEEEEC-------CCCEEEEEEcCCCCEEEEEECC--CCC
Confidence 477888887654332211 110 111 133333 579999854 2456888888654322222111 112
Q ss_pred ceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccce
Q 048803 159 LFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 159 ~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~ 235 (289)
..+.++.- +++||+..... ....++.+++....-..+..... ....+.+.- +++||+.-.. .+.
T Consensus 124 P~~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~--------~~~ 190 (267)
T 1npe_A 124 PRGIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG--------THR 190 (267)
T ss_dssp EEEEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT--------TTE
T ss_pred ccEEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC--------CCE
Confidence 24455543 68999985321 12357888876543232211111 111223332 5789988632 247
Q ss_pred EEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeC
Q 048803 236 AEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCRE 276 (289)
Q Consensus 236 v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG 276 (289)
|.+||+++..-..+.. ....+ .+++..++.||+...
T Consensus 191 I~~~~~~g~~~~~~~~----~~~~P-~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 191 AECLNPAQPGRRKVLE----GLQYP-FAVTSYGKNLYYTDW 226 (267)
T ss_dssp EEEEETTEEEEEEEEE----CCCSE-EEEEEETTEEEEEET
T ss_pred EEEEecCCCceEEEec----CCCCc-eEEEEeCCEEEEEEC
Confidence 8999997643222211 11122 245566888998853
No 235
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=78.10 E-value=17 Score=29.02 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=52.2
Q ss_pred ccceEEEEccCCeE-EeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCc--c-cCceEEEEcCCCceEeCCCCCccccc
Q 048803 133 SSSVFVFNIISATW-RRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKN--A-LKSAMAYDVARDEWASLPDMSRERDE 208 (289)
Q Consensus 133 ~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~--~-~~~~~~yd~~~~~W~~~~~~~~~~~~ 208 (289)
...++++|..+++. +.+.. + .....+..-++ +++.+....... . ...++.+| ++++..+..- ..
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~----~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~ 218 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P----RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VS 218 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E----TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ES
T ss_pred cceEEEEECCCCeEEeeecC-C----CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----cc
Confidence 35689999988887 55543 2 12233333366 555553322111 1 34677777 6666655321 11
Q ss_pred cceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecc
Q 048803 209 CKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVE 250 (289)
Q Consensus 209 ~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 250 (289)
.....-+|+.+++.+............++.+| ++++..+.
T Consensus 219 ~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 219 FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS
T ss_pred eeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEecc
Confidence 11224466644444433211111124688888 66666654
No 236
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=78.04 E-value=24 Score=28.01 Aligned_cols=55 Identities=13% Similarity=0.267 Sum_probs=27.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEE
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWR 147 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~ 147 (289)
..+.+||..+++-.. .+...... -.++.. -++.+++.|+.+ ..+.+||.....-.
T Consensus 87 ~~v~~wd~~~~~~~~--~~~~h~~~---v~~~~~~~~~~~l~s~s~D-------~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 87 KTLRLWDVATGETYQ--RFVGHKSD---VMSVDIDKKASMIISGSRD-------KTIKVWTIKGQCLA 142 (319)
T ss_dssp SEEEEEETTTTEEEE--EEECCSSC---EEEEEECTTSCEEEEEETT-------SCEEEEETTSCEEE
T ss_pred CEEEEEECCCCCeeE--EEccCCCc---EEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCeEE
Confidence 578889988775321 11111111 012222 245666666644 34677887655443
No 237
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=77.82 E-value=33 Score=31.21 Aligned_cols=108 Identities=8% Similarity=-0.076 Sum_probs=58.6
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++.||+..-. ....++++++....-+.+.... .....++++.. +++||+.-. ....|+++|+...
T Consensus 507 ~g~ly~td~~------~~~~I~~~~~dG~~~~~l~~~~--l~~PnGlavd~~~~~LY~aD~------~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 507 HGFMYWTDWG------TPAKIKKGGLNGVDIYSLVTEN--IQWPNGITLDLLSGRLYWVDS------KLHSISSIDVNGG 572 (699)
T ss_dssp SSCCEECCCS------SSCCEEBCCSSSCCCCEESCSS--CSSCCCEEECTTTCCEEEEET------TTTEEEEECSSSS
T ss_pred CCcEEEcccC------CCCeEEEEeCCCCCeeEEEeCC--CCCccEEEEeccCCEEEEEec------CCCeEEEEccCCC
Confidence 5778875311 1256777776543322221111 11224556543 688999843 2346899998754
Q ss_pred ceEeCCCCC-ccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 195 EWASLPDMS-RERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 195 ~W~~~~~~~-~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
.-+.+.... ......++++.+++||+.-.. .+.|.++|+.+++
T Consensus 573 ~~~~~~~~~~~~~~P~glavd~~~lywtd~~--------~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 573 NRKTILEDEKRLAHPFSLAVFEDKVFWTDII--------NEAIFSANRLTGS 616 (699)
T ss_dssp CCEEECCCSSSCSSCCCCEEETTEEEEECST--------TTCEEEEETTTEE
T ss_pred ceEEEEecCCcCCCceEeEEECCEEEEEeCC--------CCeEEEEEccCCC
Confidence 333333221 112234566778899988632 1368888876554
No 238
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.78 E-value=19 Score=29.20 Aligned_cols=153 Identities=8% Similarity=-0.011 Sum_probs=71.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEE-EeCCE-EEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLS-AVGPE-LVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~-lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
..++.+|..+++++.+.. ..+... ....+ .-+++ |++.+.... .....++++|+.+++.+.+...+. .
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~~~l~~~d~~~g~~~~l~~~~~--~- 285 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGES---CTHEFWIPDGSAMAYVSYFKG---QTDRVIYKANPETLENEEVMVMPP--C- 285 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEE---EEEEEECTTSSCEEEEEEETT---TCCEEEEEECTTTCCEEEEEECCS--E-
T ss_pred ceEEEEECCCCceeEeec-cCCCcc---ccceEECCCCCEEEEEecCCC---CccceEEEEECCCCCeEEeeeCCC--C-
Confidence 467788887777666654 111100 01112 22344 554432111 112348999999888776654441 1
Q ss_pred ceeEEEec-CCEEEEEcCCCC----------CCcccCceEEEEcCCCceEeCCCCCccc---------cccc-eEEECCE
Q 048803 159 LFGCASDG-DRTVYVAGGHDE----------DKNALKSAMAYDVARDEWASLPDMSRER---------DECK-AVFHCGK 217 (289)
Q Consensus 159 ~~~~~~~~-~~~iyv~GG~~~----------~~~~~~~~~~yd~~~~~W~~~~~~~~~~---------~~~~-~~~~~~~ 217 (289)
.....- +++++++.+... .......++.+|+.+++...+...+... .... ...-+|+
T Consensus 286 --~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 286 --SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp --EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred --CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCC
Confidence 123323 666666543210 0012346899999887655442221100 0111 1223554
Q ss_pred -EEEEeeecCCCCCcccceEEEEECCCCceeeccc
Q 048803 218 -LLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 218 -l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
|++.....+ ...++.+|..+.++..+..
T Consensus 364 ~l~~~s~~~~------~~~l~~~~~~~~~~~~~~~ 392 (396)
T 3c5m_A 364 GVLFTSDFEG------VPAIYIADVPESYKHLEHH 392 (396)
T ss_dssp EEEEEECTTS------SCEEEEEECCTTCC-----
T ss_pred eEEEEecCCC------CceEEEEEEcccccccccc
Confidence 444432221 1358888988887776543
No 239
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=77.73 E-value=24 Score=29.87 Aligned_cols=105 Identities=11% Similarity=0.082 Sum_probs=58.9
Q ss_pred CEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 117 PELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 117 ~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
+.||+.-. ...+.++|+.+++.+.+.... ....+.++..++.||+....... ....+..++... .+
T Consensus 153 g~Lyv~D~--------~~~I~~id~~~g~v~~~~~~~---~~P~giavd~dG~lyVad~~~~~--~~~gv~~~~~~~-~~ 218 (433)
T 4hw6_A 153 DDLYWVGQ--------RDAFRHVDFVNQYVDIKTTNI---GQCADVNFTLNGDMVVVDDQSSD--TNTGIYLFTRAS-GF 218 (433)
T ss_dssp CEEEEECB--------TSCEEEEETTTTEEEEECCCC---SCEEEEEECTTCCEEEEECCSCT--TSEEEEEECGGG-TT
T ss_pred CEEEEEeC--------CCCEEEEECCCCEEEEeecCC---CCccEEEECCCCCEEEEcCCCCc--ccceEEEEECCC-Ce
Confidence 78999832 167999999988877664422 22345665557779998532211 112355555542 22
Q ss_pred E---eCCCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCce
Q 048803 197 A---SLPDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQW 246 (289)
Q Consensus 197 ~---~~~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W 246 (289)
. .++.+..+ ..+++- ++.||+.-.. .+.|++||+.+++-
T Consensus 219 ~~~~~~~~~~~P---~giavd~~~G~lyv~d~~--------~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 219 TERLSLCNARGA---KTCAVHPQNGKIYYTRYH--------HAMISSYDPATGTL 262 (433)
T ss_dssp CCEEEEEECSSB---CCCEECTTTCCEEECBTT--------CSEEEEECTTTCCE
T ss_pred eccccccccCCC---CEEEEeCCCCeEEEEECC--------CCEEEEEECCCCeE
Confidence 2 22222212 233332 6788877422 13689999986654
No 240
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=77.50 E-value=22 Score=27.19 Aligned_cols=58 Identities=7% Similarity=0.100 Sum_probs=32.9
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCceee----cccccccC-----CCCCCceeee--eCCeEEEEeCceeeccc
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP----VEEDFMET-----ATCPRSCAGV--DSNDLYMCREGDVMALR 283 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~----~~~~~~~~-----~~~~~~~~~~--~~~~ly~~GG~~~~~~~ 283 (289)
++++|++-|. ..++||..+++-.. +....+.. .... -+++. .++++|++-|..-..++
T Consensus 127 ~gk~yfFkG~----------~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~i-DAAf~~~~~g~~YfFkG~~ywr~d 195 (225)
T 3oyo_A 127 GKEVYLFKGN----------KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGI-DACFASHKEPEAYLFKGQNYVRID 195 (225)
T ss_dssp TTEEEEEETT----------EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCC-SEEEECSSTTEEEEEETTEEEEEE
T ss_pred CCcEEEEeCC----------eEEEEECCCCeecCCCcchhhcCCCcccccCCCCc-CEEEEeCCCCEEEEEECCEEEEEe
Confidence 6899999764 57888876654332 11111111 1122 23444 48999999986554443
No 241
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=76.89 E-value=31 Score=28.63 Aligned_cols=136 Identities=13% Similarity=0.143 Sum_probs=68.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..+++||..+++-..+-.+....... .+++. -++..++.|+.+ ..+.+||..+++-.....-. ..+ .
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V---~sv~fspdg~~lasgs~D-------g~v~iWd~~~~~~~~~~~~h-~~~-v 192 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRNMTSH-SAR-V 192 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCE---EEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCC-SSC-E
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcE---EEEEECCCCCEEEEEECC-------CeEEEEEcCCCcEEEEEeCC-CCc-e
Confidence 68999999998866554443322211 12222 245677777643 45888999887643222111 111 1
Q ss_pred eeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccce--EEECCEEEEEeeecCCCCCcccceEE
Q 048803 160 FGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKA--VFHCGKLLVIGGYSTNAQGRFERHAE 237 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~--~~~~~~l~~~gG~~~~~~~~~~~~v~ 237 (289)
.+.+ .++.+.+.|+.+. .+..+|..+..... ..+......... ..-+++.++.++.++ .+.
T Consensus 193 ~~~s--~~~~~l~sgs~d~------~i~~~d~~~~~~~~-~~~~~h~~~~~~~~~~~~g~~l~s~~~D~--------~v~ 255 (420)
T 4gga_A 193 GSLS--WNSYILSSGSRSG------HIHHHDVRVAEHHV-ATLSGHSQEVCGLRWAPDGRHLASGGNDN--------LVN 255 (420)
T ss_dssp EEEE--EETTEEEEEETTS------EEEEEETTSSSCEE-EEEECCSSCEEEEEECTTSSEEEEEETTS--------CEE
T ss_pred EEEe--eCCCEEEEEeCCC------ceeEeeecccceee-EEecccccceeeeeecCCCCeeeeeeccc--------cce
Confidence 1222 3666777766543 36667765543211 001100001111 112566666666543 467
Q ss_pred EEECCCCc
Q 048803 238 AFDAAAQQ 245 (289)
Q Consensus 238 ~yd~~~~~ 245 (289)
++|..+++
T Consensus 256 i~~~~~~~ 263 (420)
T 4gga_A 256 VWPSAPGE 263 (420)
T ss_dssp EEESSCCS
T ss_pred EEeecccc
Confidence 77776543
No 242
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=75.89 E-value=27 Score=27.44 Aligned_cols=109 Identities=12% Similarity=0.079 Sum_probs=52.4
Q ss_pred ccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCc----ccc
Q 048803 133 SSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSR----ERD 207 (289)
Q Consensus 133 ~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~----~~~ 207 (289)
...+.++|+.+.+-...-.++.........+..-++ .+|+.+... ..+..+|+.+.+-...-+.+. ...
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS------ESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT------TEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC------CeEEEEECCCCCeEeeEEcCCccccccc
Confidence 456888999887654322222100001234433355 677775432 358999998876432111111 001
Q ss_pred ccceEEE-CC-EEEEEeeecCCCCCcc---cceEEEEECCCCcee
Q 048803 208 ECKAVFH-CG-KLLVIGGYSTNAQGRF---ERHAEAFDAAAQQWG 247 (289)
Q Consensus 208 ~~~~~~~-~~-~l~~~gG~~~~~~~~~---~~~v~~yd~~~~~W~ 247 (289)
....+.. ++ .||+............ .+.+.+||..+.+..
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 1222322 44 6666642110000000 147899999887643
No 243
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=75.72 E-value=23 Score=26.62 Aligned_cols=143 Identities=13% Similarity=0.175 Sum_probs=71.3
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEE--eC----CCCCCCCccceeEEEecCCEEEEEcCCCCCCcccC
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWR--RG----ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALK 184 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~--~~----~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 184 (289)
+++..++++|++=| ..+|+++.....+. .+ +.+|. ....+.....++++|++-|.
T Consensus 28 Ai~~~~g~~y~Fkg---------~~~wr~~~~~~~~~p~~I~~~wp~Lp~--~iDAa~~~~~~~~iyfFkG~-------- 88 (207)
T 1pex_A 28 AITSLRGETMIFKD---------RFFWRLHPQQVDAELFLTKSFWPELPN--RIDAAYEHPSHDLIFIFRGR-------- 88 (207)
T ss_dssp EEEEETTEEEEEET---------TEEEEECSSSSCCEEEEHHHHCTTSCS--SCCEEEEETTTTEEEEEETT--------
T ss_pred EEEeCCCcEEEEEC---------CEEEEEeCCCcCCCceehhHhccCCCC--CccEEEEeccCCcEEEEccC--------
Confidence 55668999999955 34566654332221 11 34441 11222222126899999662
Q ss_pred ceEEEEcCCCce---EeCCC--CCccccccceEEE---CCEEEEEeeecCCCCCcccceEEEEECCCCcee-----eccc
Q 048803 185 SAMAYDVARDEW---ASLPD--MSRERDECKAVFH---CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWG-----PVEE 251 (289)
Q Consensus 185 ~~~~yd~~~~~W---~~~~~--~~~~~~~~~~~~~---~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~-----~~~~ 251 (289)
.++.|+..+-.- ..+.. +|......-+|+. ++++|++-|. ..+.||..+++=. .+..
T Consensus 89 ~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~----------~ywr~d~~~~~~d~gyPr~i~~ 158 (207)
T 1pex_A 89 KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN----------QVWRYDDTNHIMDKDYPRLIEE 158 (207)
T ss_dssp EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT----------EEEEEETTTTEECSSCCCBHHH
T ss_pred EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC----------EEEEEeCcCccccCCCCccHHH
Confidence 366665332111 11221 2211112233332 4899999753 5789998754311 0111
Q ss_pred ccccCCCCCCceeeeeCCeEEEEeCceeeccc
Q 048803 252 DFMETATCPRSCAGVDSNDLYMCREGDVMALR 283 (289)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~ly~~GG~~~~~~~ 283 (289)
.-+...... -++...++++|++-|..-..++
T Consensus 159 ~~~Gip~~i-DaAf~~~g~~YfFkg~~y~rf~ 189 (207)
T 1pex_A 159 DFPGIGDKV-DAVYEKNGYIYFFNGPIQFEYS 189 (207)
T ss_dssp HSTTSCSCC-SEEEEETTEEEEEETTEEEEEE
T ss_pred cCCCCCCCc-cEEEEcCCcEEEEECCEEEEEe
Confidence 001111122 2455569999999987655554
No 244
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=75.33 E-value=47 Score=29.95 Aligned_cols=107 Identities=9% Similarity=-0.024 Sum_probs=51.5
Q ss_pred cceEEEEccC-CeEEeCCCCCCCCccceeEEEecCCE-EEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCcc----cc
Q 048803 134 SSVFVFNIIS-ATWRRGADMPGGRRMLFGCASDGDRT-VYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRE----RD 207 (289)
Q Consensus 134 ~~~~~yd~~t-~~W~~~~~~~~~~~~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----~~ 207 (289)
..++++|..+ ++-+.+.............+. -+|+ |++...... .....+..+|+.+.+...+-..... ..
T Consensus 263 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~--~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 339 (741)
T 2ecf_A 263 VKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRD--QKKLDLVEVTLASNQQRVLAHETSPTWVPLH 339 (741)
T ss_dssp EEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETT--SSEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEeccc--CCeEEEEEEECCCCceEEEEEcCCCCcCCcC
Confidence 3788889887 665444322101111222333 3444 444332111 1234688999998876544221111 00
Q ss_pred ccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecc
Q 048803 208 ECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVE 250 (289)
Q Consensus 208 ~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 250 (289)
......-+|++++.+..++ ...++.+|.... ...+.
T Consensus 340 ~~~~~spdg~~~~~~~~~g------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 340 NSLRFLDDGSILWSSERTG------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp SCCEECTTSCEEEEECTTS------SCEEEEECSSSC-EEESC
T ss_pred CceEECCCCeEEEEecCCC------ccEEEEEcCCCC-eeeee
Confidence 1112223677666654432 136788887655 55554
No 245
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=74.71 E-value=40 Score=28.85 Aligned_cols=58 Identities=10% Similarity=0.083 Sum_probs=33.7
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCcee-----ecccccccCCCCCCceeeeeCCeEEEEeCceeeccc
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWG-----PVEEDFMETATCPRSCAGVDSNDLYMCREGDVMALR 283 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~-----~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~~~~~ 283 (289)
++++|++-|. ..++||..+++-. .+....+...... -+++..++++|++-|..-..++
T Consensus 367 ~~k~yfFkG~----------~yw~yd~~~~~~~~gYPk~I~~~fpgip~~i-DAA~~~~g~~YFFkg~~ywr~d 429 (450)
T 1su3_A 367 TGKTYFFVAN----------KYWRYDEYKRSMDPGYPKMIAHDFPGIGHKV-DAVFMKDGFFYFFHGTRQYKFD 429 (450)
T ss_dssp TTEEEEEETT----------EEEEEETTTTEECSSCSEEHHHHSTTSCSCC-SEEEEETTEEEEEETTEEEEEE
T ss_pred CCeEEEEeCC----------EEEEEeCCCccccCCCCcchhhcCCCCCCCc-cEEEEcCCeEEEEeCCEEEEEE
Confidence 6899998653 5789987654321 1111111111222 2455578999999997665554
No 246
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=74.62 E-value=54 Score=30.37 Aligned_cols=92 Identities=11% Similarity=-0.051 Sum_probs=53.5
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEcCC
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDVAR 193 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 193 (289)
.++.||+.--. ....++++++....-+.+..-. .....++++. .+++||+.-. ....|+++|+..
T Consensus 524 ~~g~LYwtD~g------~~~~I~~~~~dG~~~~~lv~~~--l~~P~GLavD~~~~~LYwaD~------~~~~I~~~d~dG 589 (791)
T 3m0c_C 524 VHGFMYWTDWG------TPAKIKKGGLNGVDIYSLVTEN--IQWPNGITLDLLSGRLYWVDS------KLHSISSIDVNG 589 (791)
T ss_dssp TTTEEEEEECS------SSCEEEEEETTSCCEEEEECSS--CSCEEEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred CCCCEEEecCC------CCCeEEEEecCCCceEEEEeCC--CCCceEEEEecCCCeEEEEeC------CCCcEEEEecCC
Confidence 35899987421 1356888888755433332211 1223556665 3789999832 234689999875
Q ss_pred Cc-eEeCC---CCCccccccceEEECCEEEEEee
Q 048803 194 DE-WASLP---DMSRERDECKAVFHCGKLLVIGG 223 (289)
Q Consensus 194 ~~-W~~~~---~~~~~~~~~~~~~~~~~l~~~gG 223 (289)
.. ...+. .++.+ .++++.+++||+.-.
T Consensus 590 ~~~~~v~~~~~~l~~P---~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 590 GNRKTILEDEKRLAHP---FSLAVFEDKVFWTDI 620 (791)
T ss_dssp CSCEEEEECTTTTSSE---EEEEEETTEEEEEET
T ss_pred CceEEEecCCCccCCC---CEEEEeCCEEEEEEC
Confidence 43 22222 12322 456678899998863
No 247
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=74.60 E-value=40 Score=28.90 Aligned_cols=57 Identities=9% Similarity=0.177 Sum_probs=35.9
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeC--CCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRG--ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR 193 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 193 (289)
++++|++-| ++.|+||..+++.... +.++ . ..++...++++|++-|. ..+.||..+
T Consensus 158 ~~~~yfFkG---------~~yw~yd~~~~~~~~~~w~gi~---~--iDAA~~~~g~~YfFkG~--------~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG---------NRKWFWDLTTGTKKERSWPAVG---N--CTSALRWLGRYYCFQGN--------QFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET---------TEEEEEETTTTEEEEECCTTSC---C--CSEEEEETTEEEEEETT--------EEEEECTTT
T ss_pred CCeEEEEec---------ccEEEEecccceeecccCCCCC---c--cchheeeCCceEEEECC--------EEEEEcCcc
Confidence 678898865 4579999988775432 2232 1 22333247899999663 366677654
Q ss_pred C
Q 048803 194 D 194 (289)
Q Consensus 194 ~ 194 (289)
+
T Consensus 216 ~ 216 (460)
T 1qhu_A 216 G 216 (460)
T ss_dssp C
T ss_pred C
Confidence 3
No 248
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=74.57 E-value=31 Score=27.60 Aligned_cols=61 Identities=8% Similarity=0.141 Sum_probs=32.9
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCcccc-ccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCC
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERD-ECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAA 243 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~-~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~ 243 (289)
++.+.+.|+.+. .+..+|+.+++-... +. .+. ....+. -+++.++.|+.++ .|..||...
T Consensus 87 ~~~~l~s~s~D~------~v~lwd~~~~~~~~~--~~-~h~~~v~~v~~sp~~~~l~s~~~d~--------~i~~wd~~~ 149 (343)
T 2xzm_R 87 ENCFAISSSWDK------TLRLWDLRTGTTYKR--FV-GHQSEVYSVAFSPDNRQILSAGAER--------EIKLWNILG 149 (343)
T ss_dssp STTEEEEEETTS------EEEEEETTSSCEEEE--EE-CCCSCEEEEEECSSTTEEEEEETTS--------CEEEEESSS
T ss_pred CCCEEEEEcCCC------cEEEEECCCCcEEEE--Ec-CCCCcEEEEEECCCCCEEEEEcCCC--------EEEEEeccC
Confidence 566666666543 488899887653211 11 111 111122 2566677776543 578888764
Q ss_pred C
Q 048803 244 Q 244 (289)
Q Consensus 244 ~ 244 (289)
.
T Consensus 150 ~ 150 (343)
T 2xzm_R 150 E 150 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 249
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=74.55 E-value=14 Score=32.77 Aligned_cols=105 Identities=10% Similarity=0.019 Sum_probs=54.5
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++.+||... ..+.+.++|..+++-...-+.... .++....-++ ++|+.+. + ..+..+|+.+.
T Consensus 166 ~~~~~V~~~-------~~~~V~viD~~t~~v~~~i~~g~~---p~~v~~SpDGr~lyv~~~-d------g~V~viD~~~~ 228 (567)
T 1qks_A 166 ENLFSVTLR-------DAGQIALIDGSTYEIKTVLDTGYA---VHISRLSASGRYLFVIGR-D------GKVNMIDLWMK 228 (567)
T ss_dssp GGEEEEEET-------TTTEEEEEETTTCCEEEEEECSSC---EEEEEECTTSCEEEEEET-T------SEEEEEETTSS
T ss_pred CceEEEEeC-------CCCeEEEEECCCCeEEEEEeCCCC---ccceEECCCCCEEEEEcC-C------CeEEEEECCCC
Confidence 457777754 356799999998864322122211 2344443344 5777642 1 35999999522
Q ss_pred ceEeCCCCCccccccceEEE-----CCE-EEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 195 EWASLPDMSRERDECKAVFH-----CGK-LLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 195 ~W~~~~~~~~~~~~~~~~~~-----~~~-l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+-+.+..++........++. +|+ +|+.. +.. +.+.++|..+.+
T Consensus 229 t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n-~~~-------~~v~ViD~~t~~ 277 (567)
T 1qks_A 229 EPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGA-YWP-------PQYVIMDGETLE 277 (567)
T ss_dssp SCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEE-EET-------TEEEEEETTTCC
T ss_pred CCcEeEEEecCCCCceeEEccccCCCCCEEEEEE-ccC-------CeEEEEECCCCc
Confidence 22333333322222233443 564 55544 322 367888876644
No 250
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=74.53 E-value=49 Score=29.80 Aligned_cols=148 Identities=8% Similarity=0.000 Sum_probs=74.7
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe---EEeCCCCCCCCc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT---WRRGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~ 157 (289)
..++.+|..+..++.+..-.... . ..+..++.+|+....+ .....++++|..+.. |+.+-+-. +..
T Consensus 252 ~~l~~~~~~~~~~~~l~~~~~~~-----~-~~~~~~g~l~~~s~~~----~~~~~l~~~d~~~~~~~~~~~l~~~~-~~~ 320 (695)
T 2bkl_A 252 NDVYWKRPGEKDFRLLVKGVGAK-----Y-EVHAWKDRFYVLTDEG----APRQRVFEVDPAKPARASWKEIVPED-SSA 320 (695)
T ss_dssp EEEEEECTTCSSCEEEEECSSCC-----E-EEEEETTEEEEEECTT----CTTCEEEEEBTTBCSGGGCEEEECCC-SSC
T ss_pred eEEEEEcCCCCceEEeecCCCce-----E-EEEecCCcEEEEECCC----CCCCEEEEEeCCCCCccCCeEEecCC-CCC
Confidence 57777877777777665322211 1 2223456666654322 124678899987754 77664322 122
Q ss_pred cceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccce-EEECC-EEEEEeeecCCCCCcccce
Q 048803 158 MLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKA-VFHCG-KLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 158 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~-~l~~~gG~~~~~~~~~~~~ 235 (289)
.....+.. ++.+++....+. ...++.+++....-..+. ++....-... ..-++ .+++.. .... .-..
T Consensus 321 ~l~~~~~~-~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~~-ss~~----~P~~ 389 (695)
T 2bkl_A 321 SLLSVSIV-GGHLSLEYLKDA----TSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYVF-TSFT----TPRQ 389 (695)
T ss_dssp EEEEEEEE-TTEEEEEEEETT----EEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEEE-EETT----EEEE
T ss_pred eEEEEEEE-CCEEEEEEEECC----EEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEEE-cCCC----CCCE
Confidence 22334443 788877754332 245788887654344432 2211110111 11134 444433 2211 1246
Q ss_pred EEEEECCCCceeecc
Q 048803 236 AEAFDAAAQQWGPVE 250 (289)
Q Consensus 236 v~~yd~~~~~W~~~~ 250 (289)
++.||..+++.+.+.
T Consensus 390 v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 390 IYKTSVSTGKSELWA 404 (695)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 888999887766554
No 251
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=74.44 E-value=49 Score=29.83 Aligned_cols=148 Identities=11% Similarity=0.055 Sum_probs=77.4
Q ss_pred eeEEEEECCCC--CeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCC---eEEeCCCCCCC
Q 048803 81 YRITVLELGSG--EWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISA---TWRRGADMPGG 155 (289)
Q Consensus 81 ~~~~~~d~~~~--~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~ 155 (289)
.+++++|..+. .++.+..-.... .......++.+|+....+. ....++.+|..+. .|+.+.+-.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~-----~~~~~~~g~~l~~~t~~~~----~~~~l~~~d~~~~~~~~~~~l~~~~-- 327 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD-----VSLVDNKGSTLYLLTNRDA----PNRRLVTVDAANPGPAHWRDLIPER-- 327 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC-----EEEEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEEECCC--
T ss_pred cEEEEEECCCCCCceEEEeCCCCce-----EEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCCccccEEEecCC--
Confidence 47888887665 566654321111 1124456889998865432 2467888998764 377654333
Q ss_pred CccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccce-EEEC-CEEEEEeeecCCCCCccc
Q 048803 156 RRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKA-VFHC-GKLLVIGGYSTNAQGRFE 233 (289)
Q Consensus 156 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~-~~l~~~gG~~~~~~~~~~ 233 (289)
.... +.+. .++.|++....+ ....+..+|+..+....+. +|........ ...+ +.+++.... .. .-
T Consensus 328 ~~~~-~~s~-~g~~lv~~~~~~----g~~~l~~~d~~g~~~~~l~-~p~~~~~~~~~~~~d~~~l~~~~ss-~~----tP 395 (693)
T 3iuj_A 328 QQVL-TVHS-GSGYLFAEYMVD----ATARVEQFDYEGKRVREVA-LPGLGSVSGFNGKHDDPALYFGFEN-YA----QP 395 (693)
T ss_dssp SSCE-EEEE-ETTEEEEEEEET----TEEEEEEECTTSCEEEEEC-CSSSSEEEECCCCTTCSCEEEEEEC-SS----SC
T ss_pred CCEE-EEEE-ECCEEEEEEEEC----CeeEEEEEECCCCeeEEee-cCCCceEEeeecCCCCCEEEEEecC-CC----CC
Confidence 1122 4444 266665543221 1246888988866555543 2221110000 1113 344444321 11 11
Q ss_pred ceEEEEECCCCceeeccc
Q 048803 234 RHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 234 ~~v~~yd~~~~~W~~~~~ 251 (289)
..++.||..+++.+.+..
T Consensus 396 ~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 396 PTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp CEEEEECTTTCCEEEEEC
T ss_pred CEEEEEECCCCeEEEEEe
Confidence 468899998888776654
No 252
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=74.37 E-value=13 Score=32.57 Aligned_cols=98 Identities=11% Similarity=0.010 Sum_probs=53.8
Q ss_pred eEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEEEC
Q 048803 136 VFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVFHC 215 (289)
Q Consensus 136 ~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 215 (289)
..+||..+++-+.+...+. .....+ -+|+..++++.+.. ....++.+|+.+++.+.+..-.... ..-...-+
T Consensus 134 ~~l~d~~~g~~~~l~~~~~---~~~~~s--pDG~~la~~~~~~~--~~~~i~~~d~~~g~~~~l~~~~~~~-~~~~~SpD 205 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG---FGFVSD--IRGDLIAGLGFFGG--GRVSLFTSNLSSGGLRVFDSGEGSF-SSASISPG 205 (582)
T ss_dssp EEEEEEETTEEEEEEEESS---CEEEEE--EETTEEEEEEEEET--TEEEEEEEETTTCCCEEECCSSCEE-EEEEECTT
T ss_pred ceEEEccCCcEEEeecCCC---ceEEEC--CCCCEEEEEEEcCC--CCeEEEEEcCCCCCceEeecCCCcc-ccceECCC
Confidence 4478999888776654331 222222 35655554443321 1235899999999887664332211 11111226
Q ss_pred CEEEEEeeecCCCCCcccceEEEEECCCCcee
Q 048803 216 GKLLVIGGYSTNAQGRFERHAEAFDAAAQQWG 247 (289)
Q Consensus 216 ~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~ 247 (289)
|+.++.+..++ ...|+.+|.++++..
T Consensus 206 G~~l~~~~~~~------~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 206 MKVTAGLETAR------EARLVTVDPRDGSVE 231 (582)
T ss_dssp SCEEEEEECSS------CEEEEEECTTTCCEE
T ss_pred CCEEEEccCCC------eeEEEEEcCCCCcEE
Confidence 66544333221 136899999988876
No 253
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=74.32 E-value=33 Score=27.77 Aligned_cols=159 Identities=11% Similarity=-0.011 Sum_probs=74.1
Q ss_pred ceeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 80 VYRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 80 ~~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
...++.+|..+++-+.+..-+.. .......- +++.+++....... .....++.+|..+...+.+.... ....
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~~~-----~~~~~~sp~dg~~l~~~~~~~~~-~~~~~l~~~d~~~~~~~~l~~~~-~~~~ 239 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQENQW-----LGHPIYRPYDDSTVAFCHEGPHD-LVDARMWLINEDGTNMRKVKTHA-EGES 239 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEESSC-----EEEEEEETTEEEEEEEEECSCTT-TSSCSEEEEETTSCCCEESCCCC-TTEE
T ss_pred cceEEEEECCCCceEEeecCCcc-----ccccEECCCCCCEEEEEEecCCC-CCcceEEEEeCCCCceEEeeeCC-CCcc
Confidence 36789999998876655432111 11122222 34433332221111 12568999999887766665433 1111
Q ss_pred ceeEEEecCCE-EEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccc-----cccceEEECCE-EEEEee----ecCC
Q 048803 159 LFGCASDGDRT-VYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRER-----DECKAVFHCGK-LLVIGG----YSTN 227 (289)
Q Consensus 159 ~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~-----~~~~~~~~~~~-l~~~gG----~~~~ 227 (289)
....+..-+|+ |++....... ....++.+|+++++-+.+...+... .......-+|+ |++... ....
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGS--PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTC--CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C
T ss_pred cccceECCCCCEEEEEecCCCC--CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 11222223554 5443221111 1124899999988766554333200 00111223333 332211 0001
Q ss_pred CCCcccceEEEEECCCCceeeccc
Q 048803 228 AQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 228 ~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
-...|+.+|+.+++-..+..
T Consensus 318 ----~~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 318 ----NDPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp ----CCCEEEEEETTTTEEEEEEE
T ss_pred ----CCCEEEEEeccCCceEEecc
Confidence 12368999999887766654
No 254
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=74.26 E-value=49 Score=31.57 Aligned_cols=109 Identities=7% Similarity=0.071 Sum_probs=58.4
Q ss_pred cceE-EEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceE
Q 048803 134 SSVF-VFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAV 212 (289)
Q Consensus 134 ~~~~-~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 212 (289)
..++ ++|..+++-+.+... .......+..-+++..+++... ..+..+|+++++-..+..-..........
T Consensus 358 ~~l~~~~d~~~~~~~~l~~~---~~~~~~~~~SpDG~~la~~~~~------~~v~~~d~~tg~~~~~~~~~~~~v~~~~~ 428 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFEEN---LGNVFAMGVDRNGKFAVVANDR------FEIMTVDLETGKPTVIERSREAMITDFTI 428 (1045)
T ss_dssp EEEEEEEETTTCCEEECCCC---CCSEEEEEECTTSSEEEEEETT------SEEEEEETTTCCEEEEEECSSSCCCCEEE
T ss_pred CceEEEEECCCCCceEecCC---ccceeeeEECCCCCEEEEECCC------CeEEEEECCCCceEEeccCCCCCccceEE
Confidence 4688 889988877666521 1122334433366665554432 25889999988765443111111111112
Q ss_pred EECCEEEEEeeecC--CCCCcccceEEEEECCCCceeeccc
Q 048803 213 FHCGKLLVIGGYST--NAQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 213 ~~~~~l~~~gG~~~--~~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
.-+|+.+++++... ...+.....+..+|..+++...+..
T Consensus 429 SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 429 SDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 469 (1045)
T ss_dssp CTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred CCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence 23677666665532 0001123479999998877555543
No 255
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=71.67 E-value=43 Score=27.90 Aligned_cols=160 Identities=13% Similarity=0.058 Sum_probs=82.0
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCC----eEE-eCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISA----TWR-RGADMP 153 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~----~W~-~~~~~~ 153 (289)
..+..+++....+..+.+-. ... .+++.. ++.||+.-- ....++++++... ..+ .+..-
T Consensus 92 ~~I~~i~l~~~~~~~~~~~~--~~~----~~l~~d~~~~~lywsD~-------~~~~I~~~~~~g~~~~~~~~~~~~~~- 157 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPNL--RNV----VALDTEVASNRIYWSDL-------SQRMICSTQLDRAHGVSSYDTVISRD- 157 (400)
T ss_dssp TEEEEECTTSCSCEEEECSC--SCE----EEEEEETTTTEEEEEET-------TTTEEEEEEC------CCCEEEECSS-
T ss_pred ceeEEEccCCcceeEecccc--Ccc----eEEeeeeccCceEEEec-------CCCeEEEEEcccCCCCCcceEEEeCC-
Confidence 46677888777666543211 111 133333 688998843 2356888887652 122 22211
Q ss_pred CCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCC--CCCccccccceEE--ECCEEEEEeeecCCC
Q 048803 154 GGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLP--DMSRERDECKAVF--HCGKLLVIGGYSTNA 228 (289)
Q Consensus 154 ~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~--~~~~l~~~gG~~~~~ 228 (289)
.....+.++.. ++.||+.-.. ...++++++....-..+. .+..|+ +.++ .++.||+.-...
T Consensus 158 --~~~p~glavD~~~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~~--- 223 (400)
T 3p5b_L 158 --IQAPDGLAVDWIHSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWGT--- 223 (400)
T ss_dssp --CSCEEEEEEETTTTEEEEEETT------TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECSS---
T ss_pred --CCCcccEEEEecCCceEEEECC------CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCCC---
Confidence 11234555543 7899998432 235888988866544332 232232 3333 368899875211
Q ss_pred CCcccceEEEEECCCCceeecccccccCCCCCCceeee--eCCeEEEEeC
Q 048803 229 QGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV--DSNDLYMCRE 276 (289)
Q Consensus 229 ~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~ly~~GG 276 (289)
...|++++++...=..+... ....+. +++. .+++||+...
T Consensus 224 ----~~~I~~~~~dG~~~~~~~~~---~l~~P~-glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 224 ----PAKIKKGGLNGVDIYSLVTE---NIQWPN-GITLDLLSGRLYWVDS 265 (400)
T ss_dssp ----SCCEEEEETTSCSCEEEECS---SCSCEE-EEEEETTTTEEEEEET
T ss_pred ----CCEEEEEeCCCCccEEEEEC---CCCceE-EEEEEeCCCEEEEEEC
Confidence 13688888865432222110 111222 3443 3678888754
No 256
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=71.67 E-value=57 Score=29.35 Aligned_cols=62 Identities=8% Similarity=-0.145 Sum_probs=31.6
Q ss_pred ceEEEEcCC-CceEeCCCCC-cccc-ccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecc
Q 048803 185 SAMAYDVAR-DEWASLPDMS-RERD-ECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVE 250 (289)
Q Consensus 185 ~~~~yd~~~-~~W~~~~~~~-~~~~-~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 250 (289)
.+..+|+.+ ++-..+.... .... ..... -+|+..++...+... ....|+.+|+.+++...+.
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~---~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ---KKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS---SEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC---CeEEEEEEECCCCceEEEE
Confidence 677888887 6544432221 1111 11122 455544444332211 1247899999988876654
No 257
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=71.61 E-value=33 Score=26.62 Aligned_cols=56 Identities=9% Similarity=0.154 Sum_probs=32.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEE-EeCCEEEEEeCcCCCCcccccceEEEEccCCeE
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLS-AVGPELVVIGGLDLTTWEASSSVFVFNIISATW 146 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W 146 (289)
..+.+||..+++-...-.+......- .+++ .-+++.++.|+.+ ..+.+||..+++-
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V---~~v~~~~~~~~l~sgs~D-------g~v~iw~~~~~~~ 101 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYI---SSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKR 101 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCE---EEEEECTTSSEEEEEETT-------SEEEEEETTTTEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeE---EEEEECCCCCEEEEEECC-------CcEEEeecCCcee
Confidence 57889999998765443332222111 1222 2255677777643 4578889888764
No 258
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=71.08 E-value=40 Score=27.27 Aligned_cols=156 Identities=8% Similarity=-0.038 Sum_probs=76.5
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCC-EEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGP-ELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..++.+|+.+++-..+...+...... ....-++ .|++... ...++++|+.+++-+.+...+......
T Consensus 60 ~~l~~~d~~~g~~~~lt~~~~~~~~~----~~~spdg~~l~~~~~--------~~~l~~~d~~~g~~~~~~~~~~~~~~~ 127 (388)
T 3pe7_A 60 WNYYLLDLNTQVATQLTEGRGDNTFG----GFLSPDDDALFYVKD--------GRNLMRVDLATLEENVVYQVPAEWVGY 127 (388)
T ss_dssp CEEEEEETTTCEEEECCCSSCBCSSS----CEECTTSSEEEEEET--------TTEEEEEETTTCCEEEEEECCTTEEEE
T ss_pred ceEEEEeCCCCceEEeeeCCCCCccc----eEEcCCCCEEEEEeC--------CCeEEEEECCCCcceeeeechhhcccc
Confidence 47889999998887776544322211 1223334 5555432 246888999888766554444211111
Q ss_pred eeEEEecCCEEEEEcCCCC----------------CCcccCceEEEEcCCCceEeCCCCCccccccceEEE-CCEEEEEe
Q 048803 160 FGCASDGDRTVYVAGGHDE----------------DKNALKSAMAYDVARDEWASLPDMSRERDECKAVFH-CGKLLVIG 222 (289)
Q Consensus 160 ~~~~~~~~~~iyv~GG~~~----------------~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~l~~~g 222 (289)
......-+++.++.-.... .......++.+|+.+++-..+...+. ........- +|+.+++.
T Consensus 128 ~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~ 206 (388)
T 3pe7_A 128 GTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFC 206 (388)
T ss_dssp EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEE
T ss_pred cceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEE
Confidence 1112222454443210000 00122468899999876554432111 111112223 55544444
Q ss_pred eecCCCCCcccceEEEEECCCCceeeccc
Q 048803 223 GYSTNAQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 223 G~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
...... .....++.+|..+.+...+..
T Consensus 207 ~~~~~~--~~~~~l~~~d~~~~~~~~l~~ 233 (388)
T 3pe7_A 207 HEGPHD--LVDARMWLINEDGTNMRKVKT 233 (388)
T ss_dssp ECSCTT--TSSCSEEEEETTSCCCEESCC
T ss_pred EecCCC--CCcceEEEEeCCCCceEEeee
Confidence 332111 112468999988877666543
No 259
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=70.38 E-value=49 Score=28.00 Aligned_cols=186 Identities=15% Similarity=0.170 Sum_probs=91.8
Q ss_pred CCCeE--eCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccce--EEEE-----ccCCeEEeCCCCCCCCccce
Q 048803 90 SGEWS--ELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSV--FVFN-----IISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 90 ~~~W~--~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~--~~yd-----~~t~~W~~~~~~~~~~~~~~ 160 (289)
.+.|+ .++.+|.-..- ++.+.+++.=|++|--++.. ...++ ..|. |..-.=+.++.-- .+-..-
T Consensus 269 ~spW~~t~L~~i~~vTe~----HSFa~i~~~~fa~GyHnGDv--~PRe~G~~yfs~~~~sp~~~vrr~i~sey-~~~AsE 341 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEV----HSFATIDNNGFAMGYHQGDV--APREVGLFYFPDAFNSPSNYVRRQIPSEY-EPDASE 341 (670)
T ss_dssp TSCCEEEECCSCTTCSEE----EEEEECSSSCEEEEEEECSS--SSCEEEEEEETTTTTCTTCCEEEECCGGG-CTTEEE
T ss_pred cCCceecccccccceeee----eeeeEecCCceEEEeccCCC--CcceeeEEEecccccCCcceeeeechhhh-cccccc
Confidence 45564 56666643333 47788888888887654332 22332 2221 1111112233221 122122
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCc-cccccceEEECCEEEEEeeecCC-------CCCcc
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSR-ERDECKAVFHCGKLLVIGGYSTN-------AQGRF 232 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~-~~~~~~~~~~~~~l~~~gG~~~~-------~~~~~ 232 (289)
-|.-.+++.+|++-.-.......+.+..-+..-..|+.+.-+.. -+...-.+..++.||++|..-.. .+.++
T Consensus 342 PCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~RY 421 (670)
T 3ju4_A 342 PCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDDRY 421 (670)
T ss_dssp EEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCCCS
T ss_pred chhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcccc
Confidence 23333599999985433322344566777777778987642222 22233346789999999964221 11111
Q ss_pred c-----ceEEEEE-----CCCCceeecccccccCC----CCCCceeeeeCCeEE-EEeCceeecc
Q 048803 233 E-----RHAEAFD-----AAAQQWGPVEEDFMETA----TCPRSCAGVDSNDLY-MCREGDVMAL 282 (289)
Q Consensus 233 ~-----~~v~~yd-----~~~~~W~~~~~~~~~~~----~~~~~~~~~~~~~ly-~~GG~~~~~~ 282 (289)
. .-+...+ .+.-+|..+....-... .+....+++.++-|| ++||.|....
T Consensus 422 ~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np 486 (670)
T 3ju4_A 422 KASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNP 486 (670)
T ss_dssp SCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCC
T ss_pred cccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCc
Confidence 1 1122222 23346777765432211 112224566777764 6788776543
No 260
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=70.22 E-value=41 Score=27.07 Aligned_cols=53 Identities=13% Similarity=0.011 Sum_probs=32.2
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCc
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREG 277 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~ 277 (289)
+|+||+..... +.|.+||+++++...+... +....+...++..+++||+....
T Consensus 258 ~G~l~va~~~~--------~~V~~~d~~~G~~~~~~~~--~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 258 DHNIYVGDLAH--------SAIGVITSADRAYKLLVTD--EKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp TCCEEEEEGGG--------TEEEEEETTTTEEEEEEEC--GGGSCEEEEEECTTSCEEEEECC
T ss_pred CCCEEEEccCC--------CeEEEEECCCCCEEEEEEC--CceecCCeeEECCCCcEEEEeCc
Confidence 67888875332 4799999966666655442 21223332333357889999763
No 261
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=70.05 E-value=9.1 Score=32.46 Aligned_cols=134 Identities=9% Similarity=0.044 Sum_probs=66.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEE--eCCEEEEEeCcCCCCcccccceEEEEccCCeE---EeCCCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSA--VGPELVVIGGLDLTTWEASSSVFVFNIISATW---RRGADMPGG 155 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W---~~~~~~~~~ 155 (289)
..+.++|+.+++...+.... ..+. .++. .++.||+....... ....+..++... .+ +.++.+.
T Consensus 159 ~~I~~id~~~~~v~~~~~~~----~~P~--~ia~d~~G~~lyvad~~~~~---~~~~v~~~~~~g-~~~~~~~l~~~~-- 226 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGL----SKVR--TICWTHEADSMIITNDQNNN---DRPNNYILTRES-GFKVITELTKGQ-- 226 (430)
T ss_dssp EEEEEEETTTTEEEEEECCC----SCEE--EEEECTTSSEEEEEECCSCT---TSEEEEEEEGGG-TSCSEEEEEECS--
T ss_pred CcEEEEECCCCEEEEEecCC----CCcc--eEEEeCCCCEEEEEeCCCCc---ccceEEEEeCCC-ceeeeeeeccCC--
Confidence 46777888877766553311 1111 2222 23459998643221 223456666543 22 2333333
Q ss_pred CccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECCE-EEEEeeecCCCCCcc
Q 048803 156 RRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCGK-LLVIGGYSTNAQGRF 232 (289)
Q Consensus 156 ~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~-l~~~gG~~~~~~~~~ 232 (289)
..++.++.- ++.||+.-- ....+.+||+.+..-..+...+........++ -+++ ||+.-...
T Consensus 227 --~p~giavdp~~g~lyv~d~------~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~------- 291 (430)
T 3tc9_A 227 --NCNGAETHPINGELYFNSW------NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQ------- 291 (430)
T ss_dssp --SCCCEEECTTTCCEEEEET------TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTT-------
T ss_pred --CceEEEEeCCCCEEEEEEC------CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCC-------
Confidence 124455544 688998732 12469999998765433222221111112232 2454 88875322
Q ss_pred cceEEEEECC
Q 048803 233 ERHAEAFDAA 242 (289)
Q Consensus 233 ~~~v~~yd~~ 242 (289)
+.|.+++.+
T Consensus 292 -~~I~~~~~d 300 (430)
T 3tc9_A 292 -HYILRSDYD 300 (430)
T ss_dssp -TEEEEEEEE
T ss_pred -CEEEEEeCC
Confidence 357776554
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=69.65 E-value=44 Score=27.25 Aligned_cols=148 Identities=20% Similarity=0.229 Sum_probs=75.4
Q ss_pred eeEEEEECCCCCeEeCCCCCCCC--CCCC-ceeEEEE----eCCEEEEEeC----cCC--CCcccccceEEEEcc---CC
Q 048803 81 YRITVLELGSGEWSELPPIPGFP--DGLP-LFCQLSA----VGPELVVIGG----LDL--TTWEASSSVFVFNII---SA 144 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~--~~~~-~~~~~~~----~~~~lyv~GG----~~~--~~~~~~~~~~~yd~~---t~ 144 (289)
..+..+||..+.-..+ .++... .... ....+.. -.++|+++.- +.. ........+.+||+. |+
T Consensus 35 g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 4788899987654444 333311 0000 0123444 2468888621 111 111125678999988 55
Q ss_pred e--EEe-CCCCCC--------CCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC---ceEeCCCCCccccccc
Q 048803 145 T--WRR-GADMPG--------GRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD---EWASLPDMSRERDECK 210 (289)
Q Consensus 145 ~--W~~-~~~~~~--------~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~~ 210 (289)
+ |.. ++.... ........++.-+|.+||.+... ...|+++++... .|-.-.+....+.+..
T Consensus 114 ~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~n 188 (334)
T 2p9w_A 114 KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-----MPAIARVSADGKTVSTFAWESGNGGQRPGYS 188 (334)
T ss_dssp CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-----SCEEEEECTTSCCEEEEEECCCCSSSCCSCS
T ss_pred CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-----CCeEEEEeCCCCEEeeeeecCCCcccccCcc
Confidence 4 532 221110 11123345555589999986533 135899998754 2643333233344444
Q ss_pred e-EEE-CCE-EEEEeeecCCCCCcccceEEEEECCC
Q 048803 211 A-VFH-CGK-LLVIGGYSTNAQGRFERHAEAFDAAA 243 (289)
Q Consensus 211 ~-~~~-~~~-l~~~gG~~~~~~~~~~~~v~~yd~~~ 243 (289)
. +.. +++ |++..+ . ..+.+||+.+
T Consensus 189 GIv~~pdg~~Liv~~~-~--------g~L~~fD~~~ 215 (334)
T 2p9w_A 189 GITFDPHSNKLIAFGG-P--------RALTAFDVSK 215 (334)
T ss_dssp EEEEETTTTEEEEESS-S--------SSEEEEECSS
T ss_pred eEEEeCCCCEEEEEcC-C--------CeEEEEcCCC
Confidence 4 444 454 444443 2 2589999874
No 263
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=69.20 E-value=67 Score=29.16 Aligned_cols=148 Identities=13% Similarity=0.117 Sum_probs=78.1
Q ss_pred eeEEEEECCCC--C-eEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccC--CeEEeCCCCCCC
Q 048803 81 YRITVLELGSG--E-WSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIIS--ATWRRGADMPGG 155 (289)
Q Consensus 81 ~~~~~~d~~~~--~-W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~ 155 (289)
..++++|..+. . ++.+..-.... ...+...++.||+....+. ....++++|..+ ..|+.+-+-.
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~-----~~~~~~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~l~~~~-- 362 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQ-----WDFVDGVGDQLWFVSGDGA----PLKKIVRVDLSGSTPRFDTVVPES-- 362 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSC-----EEEEEEETTEEEEEECTTC----TTCEEEEEECSSSSCEEEEEECCC--
T ss_pred ceEEEEECCCCCCcccEEecCCCCce-----EEEEeccCCEEEEEECCCC----CCCEEEEEeCCCCccccEEEecCC--
Confidence 57888898776 6 77665322211 1123346777887754321 246689999887 5788764322
Q ss_pred CccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceEE--ECC-EEEEEeeecCCCCCcc
Q 048803 156 RRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAVF--HCG-KLLVIGGYSTNAQGRF 232 (289)
Q Consensus 156 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~--~~~-~l~~~gG~~~~~~~~~ 232 (289)
.......+.. ++.+++....+. ...++.+|+..+.-..+. +|... ...... -++ .|++...... .
T Consensus 363 ~~~l~~~~~~-~~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~~~-~v~~~~~s~d~~~l~~~~ss~~-----~ 430 (741)
T 1yr2_A 363 KDNLESVGIA-GNRLFASYIHDA----KSQVLAFDLDGKPAGAVS-LPGIG-SASGLSGRPGDRHAYLSFSSFT-----Q 430 (741)
T ss_dssp SSEEEEEEEE-BTEEEEEEEETT----EEEEEEEETTSCEEEECB-CSSSC-EEEEEECCBTCSCEEEEEEETT-----E
T ss_pred CCeEEEEEEE-CCEEEEEEEECC----EEEEEEEeCCCCceeecc-CCCCe-EEEEeecCCCCCEEEEEEcCCC-----C
Confidence 1112233333 777777654332 245788887554334332 22111 111111 133 3444332211 1
Q ss_pred cceEEEEECCCCceeeccc
Q 048803 233 ERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 233 ~~~v~~yd~~~~~W~~~~~ 251 (289)
-..++.||..+++.+.+..
T Consensus 431 P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 431 PATVLALDPATAKTTPWEP 449 (741)
T ss_dssp EEEEEEEETTTTEEEECSC
T ss_pred CCEEEEEECCCCcEEEEec
Confidence 2468899998887665543
No 264
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=68.32 E-value=37 Score=25.88 Aligned_cols=60 Identities=13% Similarity=0.160 Sum_probs=35.5
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCC------CCccc-----cccceEEE---CCEEEEEeeecCCCCCcc
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPD------MSRER-----DECKAVFH---CGKLLVIGGYSTNAQGRF 232 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~------~~~~~-----~~~~~~~~---~~~l~~~gG~~~~~~~~~ 232 (289)
++++|++-| +..+.||..+++=..--| +|... ...-+|.. ++++|++-|.
T Consensus 129 ~~k~yfFkG--------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~-------- 192 (227)
T 3lp9_A 129 GKEVYLFKG--------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD-------- 192 (227)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT--------
T ss_pred CCEEEEEEC--------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC--------
Confidence 689999966 248899887653211000 12110 12223332 5899999763
Q ss_pred cceEEEEECCCC
Q 048803 233 ERHAEAFDAAAQ 244 (289)
Q Consensus 233 ~~~v~~yd~~~~ 244 (289)
..+.||..++
T Consensus 193 --~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 --HYARVKVTPX 202 (227)
T ss_dssp --EEEEEECCSS
T ss_pred --EEEEEECCcc
Confidence 5688998776
No 265
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=67.64 E-value=35 Score=25.30 Aligned_cols=143 Identities=15% Similarity=0.177 Sum_probs=70.7
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCC--eEE--eC----CCCCCCCccceeEEEecCCEEEEEcCCCCCCcc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISA--TWR--RG----ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNA 182 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~--~W~--~~----~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~ 182 (289)
+++..++++|++=| +.+|+++.... ... .+ +.+|. ....+.....++++|++-|.
T Consensus 11 Ai~~~~g~~yfFkg---------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~--~IDAa~~~~~~~~~yfFkG~------ 73 (195)
T 1itv_A 11 AIAEIGNQLYLFKD---------GKYWRFSEGRGSRPQGPFLIADKWPALPR--KLDSVFEEPLSKKLFFFSGR------ 73 (195)
T ss_dssp EEEEETTEEEEEET---------TEEEEECCSSSCCCEEEEEHHHHCTTSCS--SCSEEEECTTTCCEEEEETT------
T ss_pred EEEEeCCEEEEEEC---------CEEEEEECCccccCCCcEEhhhccCCCCC--CccEEEEECCCCeEEEEeCC------
Confidence 56668999999955 44667665441 111 11 34442 11222221126889999663
Q ss_pred cCceEEEEcCCCce-EeCC--CCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceee-----cccc
Q 048803 183 LKSAMAYDVARDEW-ASLP--DMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP-----VEED 252 (289)
Q Consensus 183 ~~~~~~yd~~~~~W-~~~~--~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~-----~~~~ 252 (289)
..+.|+..+-.- ..+. -+|......-+|+ -++++|++-|. ..+.||..+++=.. +...
T Consensus 74 --~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~----------~ywr~d~~~~~~~~gyPr~i~~~ 141 (195)
T 1itv_A 74 --QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR----------RLWRFDVKAQMVDPRSASEVDRM 141 (195)
T ss_dssp --EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT----------EEEEEETTTTEECGGGCEEHHHH
T ss_pred --EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC----------EEEEEeCCcccccCCCccChhhc
Confidence 356666432110 0011 1221111222333 26899998653 57899987653110 1110
Q ss_pred cccCCCCCCceeeeeCCeEEEEeCceeeccc
Q 048803 253 FMETATCPRSCAGVDSNDLYMCREGDVMALR 283 (289)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~ly~~GG~~~~~~~ 283 (289)
-+..+... -++...++.+|++-|..-..++
T Consensus 142 w~Gvp~~i-daa~~~~g~~Yffkg~~y~~~~ 171 (195)
T 1itv_A 142 FPGVPLDT-HDVFQFREKAYFCQDRFYWRVS 171 (195)
T ss_dssp STTSCSSC-SEEEEETTEEEEEETTEEEEEE
T ss_pred CCCCCCCC-CEEEEeCCeEEEEeCCEEEEEE
Confidence 01111122 2455568999999987655444
No 266
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=66.85 E-value=33 Score=28.66 Aligned_cols=69 Identities=13% Similarity=0.060 Sum_probs=40.3
Q ss_pred CCEEEEEcC---CCCCCcccCceEEEEcCCCceEeCCCCCccccccceE-EECCE--EEEEeeecCCCCCcccceEEEEE
Q 048803 167 DRTVYVAGG---HDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAV-FHCGK--LLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 167 ~~~iyv~GG---~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~--l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
++++|+.-+ -..+....+.+..+|++|.+-. ..++.+....+++ .-+++ ||+..+.+ +.|.+||
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~--~~i~vg~~~~~lavs~D~~~~ly~tn~~~--------~~VsViD 360 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL--AKFEMGHEIDSINVSQDEKPLLYALSTGD--------KTLYIHD 360 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE--EEEEEEEEECEEEECSSSSCEEEEEETTT--------TEEEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEE--EEEECCCCcceEEECCCCCeEEEEEcCCC--------CeEEEEE
Confidence 688999742 1122223467999999987643 2223222222333 34554 66655422 4799999
Q ss_pred CCCCc
Q 048803 241 AAAQQ 245 (289)
Q Consensus 241 ~~~~~ 245 (289)
..+++
T Consensus 361 ~~t~k 365 (386)
T 3sjl_D 361 AESGE 365 (386)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 98876
No 267
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=66.28 E-value=49 Score=26.43 Aligned_cols=63 Identities=10% Similarity=0.199 Sum_probs=33.7
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEE-eCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWR-RGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD 194 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 194 (289)
++.+++.|+.+ ..+.+||..+++.. .+.... .. ..+++..-++...+.|+.+. .+..+|....
T Consensus 87 ~~~~l~s~s~D-------~~v~lwd~~~~~~~~~~~~h~-~~--v~~v~~sp~~~~l~s~~~d~------~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD-------KTLRLWDLRTGTTYKRFVGHQ-SE--VYSVAFSPDNRQILSAGAER------EIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT-------SEEEEEETTSSCEEEEEECCC-SC--EEEEEECSSTTEEEEEETTS------CEEEEESSSC
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCcEEEEEcCCC-Cc--EEEEEECCCCCEEEEEcCCC------EEEEEeccCC
Confidence 34555566543 45788898877642 222211 11 22333323666667776543 3777887643
No 268
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=64.80 E-value=79 Score=28.31 Aligned_cols=130 Identities=12% Similarity=0.052 Sum_probs=74.5
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeC--CCCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRG--ADMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....++++++....=+.+ ..+. . ..+.++. .+|.||+.--. ....++.+++
T Consensus 90 ~~~~LY~tD~-------~~~~I~v~~~dG~~~~~l~~~~l~-~---P~~iavdp~~G~lY~tD~g-----~~~~I~r~~~ 153 (628)
T 4a0p_A 90 LGKNLYWADT-------GTNRIEVSKLDGQHRQVLVWKDLD-S---PRALALDPAEGFMYWTEWG-----GKPKIDRAAM 153 (628)
T ss_dssp TTTEEEEEET-------TTTEEEEEETTSTTCEEEECSSCC-C---EEEEEEETTTTEEEEEECS-----SSCEEEEEET
T ss_pred CCCEEEEEEC-------CCCEEEEEecCCCcEEEEEeCCCC-C---cccEEEccCCCeEEEeCCC-----CCCEEEEEeC
Confidence 5789999843 246788898865432222 2332 2 2455554 37899998411 1246888888
Q ss_pred CCCceEeC-CCCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeC
Q 048803 192 ARDEWASL-PDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDS 268 (289)
Q Consensus 192 ~~~~W~~~-~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 268 (289)
....-+.+ ..+..| .+.++- +++||+.-.. .+.|+++|++...=+.+... ..++ .++++.+
T Consensus 154 dG~~~~~l~~~~~~P---~GlalD~~~~~LY~aD~~--------~~~I~~~d~dG~~~~v~~~~----l~~P-~glav~~ 217 (628)
T 4a0p_A 154 DGSERTTLVPNVGRA---NGLTIDYAKRRLYWTDLD--------TNLIESSNMLGLNREVIADD----LPHP-FGLTQYQ 217 (628)
T ss_dssp TSCSCEEEECSCSSE---EEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEEEC----CSCE-EEEEEET
T ss_pred CCCceEEEECCCCCc---ceEEEccccCEEEEEECC--------CCEEEEEcCCCCceEEeecc----CCCc-eEEEEEC
Confidence 76544433 222222 122332 5889998642 24789999876432333221 1222 3677788
Q ss_pred CeEEEEeC
Q 048803 269 NDLYMCRE 276 (289)
Q Consensus 269 ~~ly~~GG 276 (289)
+.||+..-
T Consensus 218 ~~ly~tD~ 225 (628)
T 4a0p_A 218 DYIYWTDW 225 (628)
T ss_dssp TEEEEEET
T ss_pred CEEEEecC
Confidence 99999863
No 269
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=64.66 E-value=81 Score=28.41 Aligned_cols=106 Identities=8% Similarity=-0.002 Sum_probs=59.3
Q ss_pred ccceEEEEccC------C--eEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC---ceEeCCC
Q 048803 133 SSSVFVFNIIS------A--TWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD---EWASLPD 201 (289)
Q Consensus 133 ~~~~~~yd~~t------~--~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~---~W~~~~~ 201 (289)
..+++++|..+ . .++.+..-.. .. ...... .++.+|+.+..+. ....+..+|+.+. .|+.+-+
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-~~-~~~~s~-dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~~l~~ 331 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFE-GE-YDYVTN-EGTVFTFKTNRHS---PNYRLINIDFTDPEESKWKVLVP 331 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSS-SC-EEEEEE-ETTEEEEEECTTC---TTCEEEEEETTSCCGGGCEEEEC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCC-cE-EEEEec-cCCEEEEEECCCC---CCCEEEEEeCCCCCcccceeccC
Confidence 56789999876 4 5766654321 11 112222 2677888765332 2346889998875 4876643
Q ss_pred CCccccccceEEE-CCEEEEEeeecCCCCCcccceEEEEECCCCc-eeecc
Q 048803 202 MSRERDECKAVFH-CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ-WGPVE 250 (289)
Q Consensus 202 ~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~-W~~~~ 250 (289)
......-...+.. ++++++....+. ...++.+|+.+++ ...+.
T Consensus 332 ~~~~~~~~~~~~~~~~~lv~~~~~~g------~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 332 EHEKDVLEWVACVRSNFLVLCYLHDV------KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp CCSSCEEEEEEEETTTEEEEEEEETT------EEEEEEEETTTCCEEEEEC
T ss_pred CCCCCeEEEEEEEcCCEEEEEEEECC------EEEEEEEECCCCCEEEecC
Confidence 2211111223344 678777765543 2468889985554 34443
No 270
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=64.27 E-value=53 Score=26.17 Aligned_cols=110 Identities=11% Similarity=-0.024 Sum_probs=58.8
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
++.+|+++.. ...+++||+.+++.+... .+. ...+.+..-++++++... ..+..||+++++
T Consensus 60 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~-~~~---~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 60 SGTAWWFNIL-------ERELHELHLASGRKTVHA-LPF---MGSALAKISDSKQLIASD--------DGLFLRDTATGV 120 (326)
T ss_dssp TTEEEEEEGG-------GTEEEEEETTTTEEEEEE-CSS---CEEEEEEEETTEEEEEET--------TEEEEEETTTCC
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEE-CCC---cceEEEEeCCCeEEEEEC--------CCEEEEECCCCc
Confidence 4688888642 356899999988765443 221 122333334788887631 238999999988
Q ss_pred eEeCCCCCcc--ccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceee
Q 048803 196 WASLPDMSRE--RDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP 248 (289)
Q Consensus 196 W~~~~~~~~~--~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~ 248 (289)
...+...+.. ........ -+|++|+....... ......++.|| +++...
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~--~~~~~~l~~~~--~g~~~~ 173 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA--ETGAGSIYHVA--KGKVTK 173 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC--CTTCEEEEEEE--TTEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC--CCCceEEEEEe--CCcEEE
Confidence 8765433211 11111222 26777764321110 00124577777 344443
No 271
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=64.22 E-value=76 Score=27.97 Aligned_cols=54 Identities=9% Similarity=0.029 Sum_probs=29.3
Q ss_pred ceEEEEcCCCceEeCCCCCccccccceE-EECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 185 SAMAYDVARDEWASLPDMSRERDECKAV-FHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 185 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
.+...|..+.....+..++..+..+... .-+++.+++.... .+.|.++|..+++
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~-------sn~V~ViD~~t~k 375 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA-------RNKLVVIDTKEGK 375 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-------GTEEEEEETTTTE
T ss_pred eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC-------CCeEEEEECCCCc
Confidence 5777777765544433333333333332 2355544443322 2579999999876
No 272
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=64.21 E-value=50 Score=25.88 Aligned_cols=128 Identities=12% Similarity=0.166 Sum_probs=62.8
Q ss_pred eeEEEEECC-CCCeEeCCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCC-eEEeCCCCCCCCc
Q 048803 81 YRITVLELG-SGEWSELPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISA-TWRRGADMPGGRR 157 (289)
Q Consensus 81 ~~~~~~d~~-~~~W~~~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~~~ 157 (289)
..+++||+. ...|+.-.+ .+... +.+.. ++.||+. .. ...++.||+... .|+...+.. .
T Consensus 117 ~~l~~~d~~g~~~~~~~~~--~~~~~-----~~~~~~~g~l~vg-t~-------~~~l~~~d~~g~~~~~~~~~~~--~- 178 (330)
T 3hxj_A 117 GHLYAINTDGTEKWRFKTK--KAIYA-----TPIVSEDGTIYVG-SN-------DNYLYAINPDGTEKWRFKTNDA--I- 178 (330)
T ss_dssp SEEEEECTTSCEEEEEECS--SCCCS-----CCEECTTSCEEEE-CT-------TSEEEEECTTSCEEEEEECSSC--C-
T ss_pred CEEEEEcCCCCEEEEEcCC--Cceee-----eeEEcCCCEEEEE-cC-------CCEEEEECCCCCEeEEEecCCC--c-
Confidence 467888887 233543322 11111 23334 5677764 21 245888888722 265432211 1
Q ss_pred cceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC-CceEeCCCCCccccccceEEE-CCEEEEEeeecCCCCCcccce
Q 048803 158 MLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR-DEWASLPDMSRERDECKAVFH-CGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 158 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~ 235 (289)
........++.||+.. ..+..||... ..|....... ...+.+.. +|.||+... + ..
T Consensus 179 -~~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~~g~l~v~t~-~--------~g 236 (330)
T 3hxj_A 179 -TSAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAGYW---TVTRPAISEDGTIYVTSL-D--------GH 236 (330)
T ss_dssp -CSCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCSSC---CCSCCEECTTSCEEEEET-T--------TE
T ss_pred -eeeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccCCc---ceeceEECCCCeEEEEcC-C--------Ce
Confidence 1223332377788764 2488888432 2476543211 11222333 457777531 1 25
Q ss_pred EEEEECCCCc-eee
Q 048803 236 AEAFDAAAQQ-WGP 248 (289)
Q Consensus 236 v~~yd~~~~~-W~~ 248 (289)
+.+||+.... |+.
T Consensus 237 l~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 237 LYAINPDGTEKWRF 250 (330)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEECCCCCEeEEe
Confidence 7888875543 443
No 273
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=63.04 E-value=44 Score=24.77 Aligned_cols=101 Identities=15% Similarity=0.177 Sum_probs=53.4
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeE-EeCCCC--CCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcC
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATW-RRGADM--PGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVA 192 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W-~~~~~~--~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 192 (289)
++++|++-| +..|+|+..+..- +.+..+ |......-++....++++|++-| +..+.||..
T Consensus 64 ~~~~yfFkG---------~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--------~~ywr~d~~ 126 (195)
T 1itv_A 64 SKKLFFFSG---------RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--------RRLWRFDVK 126 (195)
T ss_dssp TCCEEEEET---------TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--------TEEEEEETT
T ss_pred CCeEEEEeC---------CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--------CEEEEEeCC
Confidence 678999965 4567776432111 112222 21111111222223789999965 247889887
Q ss_pred CCceEe-----C----CCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 193 RDEWAS-----L----PDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 193 ~~~W~~-----~----~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
+++=.. + +.+|. .--++...+|.+|++-|. ..+.||..+.+
T Consensus 127 ~~~~~~gyPr~i~~~w~Gvp~--~idaa~~~~g~~Yffkg~----------~y~~~~~~~~~ 176 (195)
T 1itv_A 127 AQMVDPRSASEVDRMFPGVPL--DTHDVFQFREKAYFCQDR----------FYWRVSSRSEL 176 (195)
T ss_dssp TTEECGGGCEEHHHHSTTSCS--SCSEEEEETTEEEEEETT----------EEEEEECCTTC
T ss_pred cccccCCCccChhhcCCCCCC--CCCEEEEeCCeEEEEeCC----------EEEEEECCccE
Confidence 653211 0 11111 122334457999998764 47888887664
No 274
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=61.91 E-value=96 Score=28.32 Aligned_cols=122 Identities=10% Similarity=0.089 Sum_probs=58.4
Q ss_pred CCeEEeCC--CCCCCCccceeEEEec--CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCccccccceE--EEC-
Q 048803 143 SATWRRGA--DMPGGRRMLFGCASDG--DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSRERDECKAV--FHC- 215 (289)
Q Consensus 143 t~~W~~~~--~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~--~~~- 215 (289)
-.+|+... .+|. ......... ++.+|+.+... .++.-+-.-.+|+.+..++... ..... .-+
T Consensus 595 G~tW~~~~~~~~p~---~~~~i~~~~~~~g~l~~~~~~g-------~l~~S~D~G~tW~~~~~~~~~~-~~~~~~~~~~~ 663 (737)
T 2cn3_A 595 GLTFTDTKAPQLPK---SVNKIKAVPGKEGHVWLAAREG-------GLWRSTDGGYTFEKLSNVDTAH-VVGFGKAAPGQ 663 (737)
T ss_dssp TSBCEECCCSSCCS---CCSEEEEETTEEEEEEEECBTT-------CEEEESSTTSSCEECTTCSEEE-EEEEECCCTTC
T ss_pred CcCcccccCCCCCC---ccceEEEEeCCCCEEEEEeCCC-------cEEEEeCCCcccEECcCCCccc-eEEEeecCCCC
Confidence 35698863 3442 122233322 46788875321 2444333346899997544321 11110 112
Q ss_pred --CEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceee---eeCCeEEEEeCceeecc
Q 048803 216 --GKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAG---VDSNDLYMCREGDVMAL 282 (289)
Q Consensus 216 --~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~---~~~~~ly~~GG~~~~~~ 282 (289)
..||++|.... . ..+++-+-...+|+.+...... ...+...+. ...++||+.....++++
T Consensus 664 ~~~~l~~~g~~g~-----~-~gl~~S~D~G~tW~~~~~~~~~-~~~~~~~i~~d~~~~g~v~~~t~g~g~~~ 728 (737)
T 2cn3_A 664 DYMAIYITGKIDN-----V-LGFFRSDDAGKTWVRINDDEHG-YGAVDTAITGDPRVYGRVYIATNGRGIVY 728 (737)
T ss_dssp SSCEEEEEEEETT-----E-EEEEEESSTTSSCEECSBTTBC-CSCCCSCEEEETTEEEEEEEECBSSCEEE
T ss_pred CCcEEEEEEecCC-----c-ceEEEeCCCCCCCEeccCCccc-cCcccceecCCCCcCceEEEEeCCCceEE
Confidence 26888875421 1 2345444456799999742111 011111111 12588888865554444
No 275
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=59.71 E-value=4.2 Score=22.10 Aligned_cols=17 Identities=41% Similarity=0.481 Sum_probs=12.4
Q ss_pred CCCChHHHHHHHhhcCC
Q 048803 4 IPDLPNEIALECLSRVS 20 (289)
Q Consensus 4 ~~~Lp~dl~~~il~~lp 20 (289)
+..||.||.+|||+--.
T Consensus 21 F~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 21 FKQLPADIQEEILSGKS 37 (48)
T ss_dssp TTTSCHHHHHHHTTCCC
T ss_pred HHHCcHHHHHHHHhcch
Confidence 45788888888887543
No 276
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=59.18 E-value=69 Score=25.79 Aligned_cols=54 Identities=4% Similarity=-0.144 Sum_probs=29.0
Q ss_pred CCEEEEEeeecCCCCCcccce-EEEEECCCCceeeccccccc-CCCCCCceeeeeCCeEEEEeCce
Q 048803 215 CGKLLVIGGYSTNAQGRFERH-AEAFDAAAQQWGPVEEDFME-TATCPRSCAGVDSNDLYMCREGD 278 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~-v~~yd~~~~~W~~~~~~~~~-~~~~~~~~~~~~~~~ly~~GG~~ 278 (289)
++++++.|+.++ . |..||..+.+-.. ..... ............++++++.|+.|
T Consensus 206 ~g~~l~s~s~d~--------~~v~iwd~~~~~~~~--~~~~g~h~~~v~~~~~s~~~~~l~s~s~d 261 (355)
T 3vu4_A 206 KSDMVATCSQDG--------TIIRVFKTEDGVLVR--EFRRGLDRADVVDMKWSTDGSKLAVVSDK 261 (355)
T ss_dssp TSSEEEEEETTC--------SEEEEEETTTCCEEE--EEECTTCCSCEEEEEECTTSCEEEEEETT
T ss_pred CCCEEEEEeCCC--------CEEEEEECCCCcEEE--EEEcCCCCCcEEEEEECCCCCEEEEEECC
Confidence 677888877653 4 8899988764322 21000 11111112234567777777655
No 277
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=56.29 E-value=1.1e+02 Score=27.02 Aligned_cols=109 Identities=10% Similarity=0.021 Sum_probs=56.1
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE 195 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 195 (289)
+++.++.|+.+ ..+.+||..+.+....-.... ........+..++...+.++.+. .+..+|+.+..
T Consensus 250 dg~~l~s~s~D-------~~v~lWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~s~s~d~------~i~~~~~~~~~ 315 (611)
T 1nr0_A 250 DGTKIASASAD-------KTIKIWNVATLKVEKTIPVGT-RIEDQQLGIIWTKQALVSISANG------FINFVNPELGS 315 (611)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECCS-SGGGCEEEEEECSSCEEEEETTC------CEEEEETTTTE
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCceeeeecCCC-CccceeEEEEEcCCEEEEEeCCC------cEEEEeCCCCC
Confidence 45666666643 457889998877643322221 11111222223555555555433 36778877654
Q ss_pred eEeCCCCCccccc-cceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeec
Q 048803 196 WASLPDMSRERDE-CKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPV 249 (289)
Q Consensus 196 W~~~~~~~~~~~~-~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~ 249 (289)
-... + ..+.. ...+. -+++.++.|+.++ .|..+|..+.+-..+
T Consensus 316 ~~~~--~-~gh~~~v~~l~~spdg~~l~s~s~D~--------~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 316 IDQV--R-YGHNKAITALSSSADGKTLFSADAEG--------HINSWDISTGISNRV 361 (611)
T ss_dssp EEEE--E-CCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEC
T ss_pred cceE--E-cCCCCCEEEEEEeCCCCEEEEEeCCC--------cEEEEECCCCceeee
Confidence 2111 1 11111 11122 2677777777653 588899988765443
No 278
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=55.04 E-value=66 Score=24.34 Aligned_cols=93 Identities=12% Similarity=0.203 Sum_probs=49.7
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCC----------CCcc--ccccceEE-E--CCEEEEEeeecCCCCCc
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPD----------MSRE--RDECKAVF-H--CGKLLVIGGYSTNAQGR 231 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~----------~~~~--~~~~~~~~-~--~~~l~~~gG~~~~~~~~ 231 (289)
++++|++-| +.++.|+..++ .+..+. +|.. ....-+|+ . ++++|++-|.
T Consensus 72 ~~~~yfFkG--------~~yw~~~~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~------- 135 (219)
T 1hxn_A 72 EDKLYLIQD--------TKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR------- 135 (219)
T ss_dssp TTEEEEEET--------TEEEEEECSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT-------
T ss_pred CCcEEEecC--------CEEEEEeCCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC-------
Confidence 899999955 24788876532 111111 2221 11123333 2 5899999763
Q ss_pred ccceEEEEECCCC---ceeecccccccCCCCCCceeee------------eCCeEEEEeCceeeccc
Q 048803 232 FERHAEAFDAAAQ---QWGPVEEDFMETATCPRSCAGV------------DSNDLYMCREGDVMALR 283 (289)
Q Consensus 232 ~~~~v~~yd~~~~---~W~~~~~~~~~~~~~~~~~~~~------------~~~~ly~~GG~~~~~~~ 283 (289)
..+.||..+. .|...+.. ..... ++.. .++.+|++-|..-..++
T Consensus 136 ---~ywr~d~~~~P~~i~~~~~g~----p~~vd-Aa~~~~~~~~~~~~~~~~~~~YFFkg~~y~r~~ 194 (219)
T 1hxn_A 136 ---RLWWLDLKSGAQATWTELPWP----HEKVD-GALCMEKPLGPNSCSTSGPNLYLIHGPNLYCYR 194 (219)
T ss_dssp ---EEEEEEGGGGGGCCCEEECCS----CSCCS-EEEEESSCSSSCCSCSSSCEEEEEETTEEEEES
T ss_pred ---EEEEEeCCCCceEhhhcCCCC----CCCcC-EEEEccccccccceeccCCeEEEEECCEEEEEe
Confidence 4688987542 23322221 12222 2333 35679999987655544
No 279
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=54.44 E-value=84 Score=25.32 Aligned_cols=15 Identities=20% Similarity=-0.002 Sum_probs=10.1
Q ss_pred eeEEEEECC-CCCeEe
Q 048803 81 YRITVLELG-SGEWSE 95 (289)
Q Consensus 81 ~~~~~~d~~-~~~W~~ 95 (289)
..+.+||.. +++...
T Consensus 167 ~~v~~~~~~~~g~~~~ 182 (365)
T 1jof_A 167 NKLWTHRKLASGEVEL 182 (365)
T ss_dssp TEEEEEEECTTSCEEE
T ss_pred CEEEEEEECCCCCEEE
Confidence 467888887 666543
No 280
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=54.40 E-value=39 Score=27.66 Aligned_cols=102 Identities=3% Similarity=-0.048 Sum_probs=48.0
Q ss_pred cceEEEEccCCe--EEeCCC-CCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCCCc------
Q 048803 134 SSVFVFNIISAT--WRRGAD-MPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDMSR------ 204 (289)
Q Consensus 134 ~~~~~yd~~t~~--W~~~~~-~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~~~------ 204 (289)
..++.+|..+++ |+.-.. +. ++......+...++.+|++....+. .++.||.+++.|.---.++.
T Consensus 20 G~l~Ald~~tG~~~W~~~~~~~~-p~~~~~~~~~~~~~~~~vv~p~~dG-----~l~a~~~~~G~~~~~~~~~~lv~~SP 93 (339)
T 2be1_A 20 GGLHAVDRRNGHIIWSIEPENFQ-PLIEIQEPSRLETYETLIIEPFGDG-----NIYYFNAHQGLQKLPLSIRQLVSTSP 93 (339)
T ss_dssp SCEEEEETTTTEEEEEECGGGSC-CSEECCCSCTTTSSEEEEECCSTTT-----EEEEEETTTEEEEEEEEHHHHHTTCS
T ss_pred CeEEEEECCCCcEEEEecCCccC-CcEEecCCccccCCcEEEEEECCCC-----EEEEEECCCCcEEeeeccccceeccc
Confidence 446777877765 775433 11 1111100011125567776533222 48888988876542111111
Q ss_pred cccccceEE------ECCEEEEEeeecCCCCCcccceEEEEECCCCc--eeec
Q 048803 205 ERDECKAVF------HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ--WGPV 249 (289)
Q Consensus 205 ~~~~~~~~~------~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 249 (289)
-+.....++ ..+....+|+.+ ..+..+|..+++ |+.-
T Consensus 94 ~~~~~~pvv~~~~~~~~~g~Vy~Gs~~--------g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 94 LHLKTNIVVNDSGKIVEDEKVYTGSMR--------TIMYTINMLNGEIISAFG 138 (339)
T ss_dssp EEEECC----------CCEEEEECEEE--------EEEEEEETTTCCEEEEES
T ss_pred cccCCCceeecccccccCCEEEEEecC--------CEEEEEECCCCcEEEEEe
Confidence 111111122 134444455544 368888988875 6654
No 281
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=52.91 E-value=76 Score=29.00 Aligned_cols=59 Identities=15% Similarity=0.281 Sum_probs=36.6
Q ss_pred CceEeCCCCCccccccceEEE-CCEEEEEeeecCCC-CCcccceEEEEECCCCceeecccc
Q 048803 194 DEWASLPDMSRERDECKAVFH-CGKLLVIGGYSTNA-QGRFERHAEAFDAAAQQWGPVEED 252 (289)
Q Consensus 194 ~~W~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~-~~~~~~~v~~yd~~~~~W~~~~~~ 252 (289)
.+|+.+..+|.....+.++.. ++.+|+..+-.... .+.....+++++-...+|+.+...
T Consensus 232 ~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~ 292 (737)
T 2cn3_A 232 VTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPI 292 (737)
T ss_dssp SCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSS
T ss_pred CceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCC
Confidence 479999877654333333332 78899876432110 000124688999999999998763
No 282
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=50.26 E-value=45 Score=27.86 Aligned_cols=73 Identities=14% Similarity=0.044 Sum_probs=43.5
Q ss_pred eCCEEEEEeCc--CCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEecCC--EEEEEcCCCCCCcccCceEEEE
Q 048803 115 VGPELVVIGGL--DLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDGDR--TVYVAGGHDEDKNALKSAMAYD 190 (289)
Q Consensus 115 ~~~~lyv~GG~--~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~~~--~iyv~GG~~~~~~~~~~~~~yd 190 (289)
-++++|+.-+. ........++++++|..|.+-..--++. . ...++++..++ ++|+..+. ..++.+||
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~-~~~~lavs~D~~~~ly~tn~~------~~~VsViD 360 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--H-EIDSINVSQDEKPLLYALSTG------DKTLYIHD 360 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--E-EECEEEECSSSSCEEEEEETT------TTEEEEEE
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC--C-CcceEEECCCCCeEEEEEcCC------CCeEEEEE
Confidence 46799997432 1111123578999999998864433333 1 12345554455 47776432 23589999
Q ss_pred cCCCce
Q 048803 191 VARDEW 196 (289)
Q Consensus 191 ~~~~~W 196 (289)
..+++-
T Consensus 361 ~~t~k~ 366 (386)
T 3sjl_D 361 AESGEE 366 (386)
T ss_dssp TTTCCE
T ss_pred CCCCcE
Confidence 998864
No 283
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=49.34 E-value=92 Score=24.28 Aligned_cols=149 Identities=14% Similarity=0.137 Sum_probs=71.8
Q ss_pred eeEEEEECCCCC--eEeCCCCCCCCCCCCceeEEEE-eCCEEEEEeCcCCCCcccccceEEEEccC-CeEEeCCCCCCCC
Q 048803 81 YRITVLELGSGE--WSELPPIPGFPDGLPLFCQLSA-VGPELVVIGGLDLTTWEASSSVFVFNIIS-ATWRRGADMPGGR 156 (289)
Q Consensus 81 ~~~~~~d~~~~~--W~~~~~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~~ 156 (289)
..+++||+. ++ |..- ++..... +.+. .++.||+.. ..+++||... ..|+...... .
T Consensus 157 ~~l~~~d~~-g~~~~~~~--~~~~~~~-----~~~~d~~g~l~v~t----------~~l~~~d~~g~~~~~~~~~~~--~ 216 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFK--TNDAITS-----AASIGKDGTIYFGS----------DKVYAINPDGTEKWNFYAGYW--T 216 (330)
T ss_dssp SEEEEECTT-SCEEEEEE--CSSCCCS-----CCEECTTCCEEEES----------SSEEEECTTSCEEEEECCSSC--C
T ss_pred CEEEEECCC-CCEeEEEe--cCCCcee-----eeEEcCCCEEEEEe----------CEEEEECCCCcEEEEEccCCc--c
Confidence 467888887 44 4432 2221111 2333 366777652 4477888432 2366543221 1
Q ss_pred ccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCc-eEeCCCCCccccccceEEE-CCEEEEEeeecCCCCCcccc
Q 048803 157 RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDE-WASLPDMSRERDECKAVFH-CGKLLVIGGYSTNAQGRFER 234 (289)
Q Consensus 157 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~ 234 (289)
..+.+...++.||+... ...+.+||+.... |..-..- .. ....+.. +++||+... + .
T Consensus 217 --~~~~~~~~~g~l~v~t~-------~~gl~~~~~~g~~~~~~~~~~--~~-~~~~~~~~~g~l~v~t~-~--------g 275 (330)
T 3hxj_A 217 --VTRPAISEDGTIYVTSL-------DGHLYAINPDGTEKWRFKTGK--RI-ESSPVIGNTDTIYFGSY-D--------G 275 (330)
T ss_dssp --CSCCEECTTSCEEEEET-------TTEEEEECTTSCEEEEEECSS--CC-CSCCEECTTSCEEEECT-T--------C
T ss_pred --eeceEECCCCeEEEEcC-------CCeEEEECCCCCEeEEeeCCC--Cc-cccceEcCCCeEEEecC-C--------C
Confidence 22233333667887532 1247778765443 5532211 11 1123333 677876531 1 2
Q ss_pred eEEEEECCCC-ceeecccccccCCCCCCceeee-eCCeEEEEeC
Q 048803 235 HAEAFDAAAQ-QWGPVEEDFMETATCPRSCAGV-DSNDLYMCRE 276 (289)
Q Consensus 235 ~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~-~~~~ly~~GG 276 (289)
.+.+||+... .|..-. + .....+++. .+++||+.+.
T Consensus 276 gl~~~d~~g~~~~~~~~----~--~~~~~~~~~d~~g~l~~gt~ 313 (330)
T 3hxj_A 276 HLYAINPDGTEKWNFET----G--SWIIATPVIDENGTIYFGTR 313 (330)
T ss_dssp EEEEECTTSCEEEEEEC----S--SCCCSCCEECTTCCEEEECT
T ss_pred CEEEECCCCcEEEEEEc----C--CccccceEEcCCCEEEEEcC
Confidence 5888987433 354321 1 111123333 6888888653
No 284
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=48.13 E-value=1.1e+02 Score=24.64 Aligned_cols=65 Identities=11% Similarity=0.073 Sum_probs=34.4
Q ss_pred CCEEEEEeCcCCCCcccccc-eEEEEccCCeEE-eCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC
Q 048803 116 GPELVVIGGLDLTTWEASSS-VFVFNIISATWR-RGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR 193 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~-~~~yd~~t~~W~-~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 193 (289)
++++++.|+.+ .. +.+||..+++-. .+..-.+ .....+++..-++...+.|+.+. .+..||..+
T Consensus 206 ~g~~l~s~s~d-------~~~v~iwd~~~~~~~~~~~~g~h-~~~v~~~~~s~~~~~l~s~s~d~------~v~iw~~~~ 271 (355)
T 3vu4_A 206 KSDMVATCSQD-------GTIIRVFKTEDGVLVREFRRGLD-RADVVDMKWSTDGSKLAVVSDKW------TLHVFEIFN 271 (355)
T ss_dssp TSSEEEEEETT-------CSEEEEEETTTCCEEEEEECTTC-CSCEEEEEECTTSCEEEEEETTC------EEEEEESSC
T ss_pred CCCEEEEEeCC-------CCEEEEEECCCCcEEEEEEcCCC-CCcEEEEEECCCCCEEEEEECCC------EEEEEEccC
Confidence 45666666643 34 788898876532 2221001 11122333333677777776543 477777764
Q ss_pred C
Q 048803 194 D 194 (289)
Q Consensus 194 ~ 194 (289)
.
T Consensus 272 ~ 272 (355)
T 3vu4_A 272 D 272 (355)
T ss_dssp C
T ss_pred C
Confidence 4
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=46.75 E-value=1.4e+02 Score=25.79 Aligned_cols=112 Identities=10% Similarity=0.024 Sum_probs=59.8
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCC-CccceeEEE-------ecCC-EEEEEcCCCCCCcccCce
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGG-RRMLFGCAS-------DGDR-TVYVAGGHDEDKNALKSA 186 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-~~~~~~~~~-------~~~~-~iyv~GG~~~~~~~~~~~ 186 (289)
++.||++-. ....++++|+.++..+.+...... .......++ ..++ .||+.--..........+
T Consensus 151 ~~~Lyv~~~-------~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 151 KDHLYICYD-------GHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEEEEEEE-------TEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred CCEEEEEEC-------CCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 467998853 135689999999988776544311 112344444 3344 488874332110112347
Q ss_pred EEEEcCC-CceEeCC---CCCccccccceEEE--CCEEEEEeeecCCCCCcccceEEEEECC
Q 048803 187 MAYDVAR-DEWASLP---DMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAA 242 (289)
Q Consensus 187 ~~yd~~~-~~W~~~~---~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~ 242 (289)
..++... +.|...+ .++.....+++++. ++.||+.--.. ..|++||++
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~--------g~V~r~d~~ 277 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEK--------GQVFRLDLV 277 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTT--------TEEEEECHH
T ss_pred EEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCC--------CEEEEEecc
Confidence 7777554 3553100 11122222344443 46788875322 368999997
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=46.72 E-value=1.6e+02 Score=26.31 Aligned_cols=162 Identities=10% Similarity=0.051 Sum_probs=86.7
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEe--CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCcc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAV--GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRM 158 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~ 158 (289)
.++...|..+..-..+.+++.-... .+++.. ++.||+... ....++++++.....+.+.... ...
T Consensus 15 ~~I~~i~l~~~~~~~~~~~~~~~~~----~~l~~d~~~~~lywtD~-------~~~~I~r~~~~g~~~~~v~~~g--~~~ 81 (628)
T 4a0p_A 15 ADIRRISLETNNNNVAIPLTGVKEA----SALDFDVTDNRIYWTDI-------SLKTISRAFMNGSALEHVVEFG--LDY 81 (628)
T ss_dssp TEEEEEESSCTTCEEECCCCSCSCE----EEEEEETTTTEEEEEET-------TTTEEEEEETTSCSCEEEECSS--CSC
T ss_pred CcEEEEECCCCCcceEEEcCCCCce----EEEEEECCCCEEEEEEC-------CCCeEEEEECCCCCcEEEEeCC--CCC
Confidence 4677888876554333333321111 133332 589999854 2456888888765554443222 112
Q ss_pred ceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEcCCCceEeC--CCCCccccccceEEE--CCEEEEEeeecCCCCCccc
Q 048803 159 LFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDVARDEWASL--PDMSRERDECKAVFH--CGKLLVIGGYSTNAQGRFE 233 (289)
Q Consensus 159 ~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~--~~~~~~~~~~~~~~~--~~~l~~~gG~~~~~~~~~~ 233 (289)
..+.++. .+++||+.-. ....++++++....=+.+ ..+..|+ ..++- +|.||+.--.. .
T Consensus 82 P~GlAvD~~~~~LY~tD~------~~~~I~v~~~dG~~~~~l~~~~l~~P~---~iavdp~~G~lY~tD~g~-------~ 145 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADT------GTNRIEVSKLDGQHRQVLVWKDLDSPR---ALALDPAEGFMYWTEWGG-------K 145 (628)
T ss_dssp CCEEEEETTTTEEEEEET------TTTEEEEEETTSTTCEEEECSSCCCEE---EEEEETTTTEEEEEECSS-------S
T ss_pred cceEEEEeCCCEEEEEEC------CCCEEEEEecCCCcEEEEEeCCCCCcc---cEEEccCCCeEEEeCCCC-------C
Confidence 3456654 3789999833 224688998875432222 2333332 33343 68999875211 1
Q ss_pred ceEEEEECCCCceeecccccccCCCCCCceeee--eCCeEEEEeC
Q 048803 234 RHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV--DSNDLYMCRE 276 (289)
Q Consensus 234 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~~ly~~GG 276 (289)
..|++.+++...-..+... ...+. +++. .+++||+.-.
T Consensus 146 ~~I~r~~~dG~~~~~l~~~----~~~P~-GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 146 PKIDRAAMDGSERTTLVPN----VGRAN-GLTIDYAKRRLYWTDL 185 (628)
T ss_dssp CEEEEEETTSCSCEEEECS----CSSEE-EEEEETTTTEEEEEET
T ss_pred CEEEEEeCCCCceEEEECC----CCCcc-eEEEccccCEEEEEEC
Confidence 3688888876654444321 11222 3333 2578888854
No 287
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=45.76 E-value=1.2e+02 Score=24.44 Aligned_cols=16 Identities=6% Similarity=0.140 Sum_probs=11.1
Q ss_pred ccceEEEEcc-CCeEEe
Q 048803 133 SSSVFVFNII-SATWRR 148 (289)
Q Consensus 133 ~~~~~~yd~~-t~~W~~ 148 (289)
.+.+.+||.. +++.+.
T Consensus 166 ~~~v~~~~~~~~g~~~~ 182 (365)
T 1jof_A 166 ANKLWTHRKLASGEVEL 182 (365)
T ss_dssp TTEEEEEEECTTSCEEE
T ss_pred CCEEEEEEECCCCCEEE
Confidence 3568889987 676543
No 288
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=45.42 E-value=81 Score=25.01 Aligned_cols=59 Identities=15% Similarity=0.272 Sum_probs=40.7
Q ss_pred cCCEEEEEcCCCCCC-cccCceEEEEc-CCCceEeCCCCCccccccceEEECCEEEEEeeec
Q 048803 166 GDRTVYVAGGHDEDK-NALKSAMAYDV-ARDEWASLPDMSRERDECKAVFHCGKLLVIGGYS 225 (289)
Q Consensus 166 ~~~~iyv~GG~~~~~-~~~~~~~~yd~-~~~~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~ 225 (289)
.+|+.++.|-....+ ...+.+..|.- ..++|+.++.+.-....+-.+-++|.+. +||..
T Consensus 39 ~~Gk~~I~GRVE~Rd~se~S~V~fFeet~~d~w~~v~~~~~~LqDPF~t~I~gEli-~GGve 99 (315)
T 2b4w_A 39 YKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPELSWELEDPYIAKINNEMI-FGGTR 99 (315)
T ss_dssp ETTEEEEEEEEECTTCSSCCEEEEEEEEETTEEEECTTCCBSCEEEEEEEETTEEE-EEEEE
T ss_pred ECCEEEEEeeeecCCCccccEEEEEEEcCCCceEECCCCEEEecCccEEEECCEEE-eeeEE
Confidence 388888888776554 24577888876 7889998888433444556677888854 55543
No 289
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=44.69 E-value=1.8e+02 Score=26.32 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=59.1
Q ss_pred ccceEEEEccCC--e-EEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC--CceEeCCCCCcccc
Q 048803 133 SSSVFVFNIISA--T-WRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR--DEWASLPDMSRERD 207 (289)
Q Consensus 133 ~~~~~~yd~~t~--~-W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~~~ 207 (289)
..+++++|..+. + |+.+..-. ... ...... .++.||+....+. ....+..+|+.+ ..|+.+-+-....
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~-~~~-~~~~~~-dg~~l~~~s~~~~---~~~~l~~~d~~~~~~~~~~l~~~~~~~- 365 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDL-KAQ-WDFVDG-VGDQLWFVSGDGA---PLKKIVRVDLSGSTPRFDTVVPESKDN- 365 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSS-SSC-EEEEEE-ETTEEEEEECTTC---TTCEEEEEECSSSSCEEEEEECCCSSE-
T ss_pred cceEEEEECCCCCCcccEEecCCC-Cce-EEEEec-cCCEEEEEECCCC---CCCEEEEEeCCCCccccEEEecCCCCe-
Confidence 568999999877 6 77765433 111 111222 3677777744321 234689999887 5788764322111
Q ss_pred ccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeec
Q 048803 208 ECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPV 249 (289)
Q Consensus 208 ~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~ 249 (289)
-......++++++....++ ...++.+|...+.-..+
T Consensus 366 l~~~~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 366 LESVGIAGNRLFASYIHDA------KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEEEEBTEEEEEEEETT------EEEEEEEETTSCEEEEC
T ss_pred EEEEEEECCEEEEEEEECC------EEEEEEEeCCCCceeec
Confidence 1122334788887776543 24678888755544444
No 290
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=43.56 E-value=1e+02 Score=23.06 Aligned_cols=101 Identities=9% Similarity=0.072 Sum_probs=53.1
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCe---EEeCCCCCCCCc-cceeEEEec--CCEEEEEcCCCCCCcccCceEEE
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISAT---WRRGADMPGGRR-MLFGCASDG--DRTVYVAGGHDEDKNALKSAMAY 189 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~~~-~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~y 189 (289)
++++|++-| +.+|+|+..+-. =+.+..+..+.. ....++... ++++|++-| +..+.|
T Consensus 79 ~~~iyfFkG---------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG--------~~ywr~ 141 (207)
T 1pex_A 79 HDLIFIFRG---------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG--------NQVWRY 141 (207)
T ss_dssp TTEEEEEET---------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET--------TEEEEE
T ss_pred CCcEEEEcc---------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC--------CEEEEE
Confidence 589999965 456777633211 022333211110 112233322 589999965 247889
Q ss_pred EcCCCceEeC---------CCCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 190 DVARDEWASL---------PDMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 190 d~~~~~W~~~---------~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
|..+++=..- +-+|. .--++...+|++|++-|. ..+.||..+++
T Consensus 142 d~~~~~~d~gyPr~i~~~~~Gip~--~iDaAf~~~g~~YfFkg~----------~y~rf~~~~~~ 194 (207)
T 1pex_A 142 DDTNHIMDKDYPRLIEEDFPGIGD--KVDAVYEKNGYIYFFNGP----------IQFEYSIWSNR 194 (207)
T ss_dssp ETTTTEECSSCCCBHHHHSTTSCS--CCSEEEEETTEEEEEETT----------EEEEEETTTTE
T ss_pred eCcCccccCCCCccHHHcCCCCCC--CccEEEEcCCcEEEEECC----------EEEEEeCCccE
Confidence 8876532110 01111 112233458999999653 57888887654
No 291
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=43.18 E-value=1.4e+02 Score=24.49 Aligned_cols=169 Identities=14% Similarity=0.152 Sum_probs=82.7
Q ss_pred eEEEEECCCCCeEeCCCC---CCCCC-----CCCceeEEEEe----CCEEEEEeCcCCCCcccccceEEEEccCCeEEeC
Q 048803 82 RITVLELGSGEWSELPPI---PGFPD-----GLPLFCQLSAV----GPELVVIGGLDLTTWEASSSVFVFNIISATWRRG 149 (289)
Q Consensus 82 ~~~~~d~~~~~W~~~~~~---~~~~~-----~~~~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~ 149 (289)
-+++.+-...+|+.+... +.... ......+++.. .+.||+.+. ...+++.+-...+|+.+
T Consensus 82 gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~--------~ggl~~S~DgG~tW~~~ 153 (394)
T 3b7f_A 82 TVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS--------PQGLFRSTDHGASWEPV 153 (394)
T ss_dssp EEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE--------TTEEEEESSTTSBCEEC
T ss_pred cEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec--------CCcEEEEcCCCCCeEEC
Confidence 456666667889887632 11110 00001123332 467776532 23477777777789887
Q ss_pred CCC---CC-------------CCccceeEEEec--CCEEEEEcCCCCCCcccCceEEEEcCCCceEeCCCC------Ccc
Q 048803 150 ADM---PG-------------GRRMLFGCASDG--DRTVYVAGGHDEDKNALKSAMAYDVARDEWASLPDM------SRE 205 (289)
Q Consensus 150 ~~~---~~-------------~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~------~~~ 205 (289)
... +. .....+...+.- .+.||+.... ..++..+-...+|+.+... |.+
T Consensus 154 ~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~ 226 (394)
T 3b7f_A 154 AGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDP 226 (394)
T ss_dssp HHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSS
T ss_pred cCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCC
Confidence 432 10 011122333211 3567775321 1266666666789987531 111
Q ss_pred -----ccccceEEE-C--CEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeee---eCCeEEEE
Q 048803 206 -----RDECKAVFH-C--GKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGV---DSNDLYMC 274 (289)
Q Consensus 206 -----~~~~~~~~~-~--~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~~ly~~ 274 (289)
...+.++.. + +.||+... ..|++.+....+|+.+....+........+++. -.+.||+.
T Consensus 227 ~~~~g~~~~~i~~~~~~~~~l~vg~~----------~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 227 NVEFGHDPHCVVQHPAAPDILYQQNH----------CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp SSSSCBCEEEEEECSSSTTEEEEEET----------TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred ccccCcceeEEEECCCCCCEEEEEcC----------CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 111222322 1 66776421 257888888899999864211100012123333 34678886
Q ss_pred e
Q 048803 275 R 275 (289)
Q Consensus 275 G 275 (289)
.
T Consensus 297 t 297 (394)
T 3b7f_A 297 P 297 (394)
T ss_dssp E
T ss_pred e
Confidence 3
No 292
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=42.36 E-value=46 Score=29.64 Aligned_cols=170 Identities=15% Similarity=0.075 Sum_probs=82.6
Q ss_pred eeEEEEECCCCCeEe-CCCCCCCCCCCCceeEEEEe-CCEEEEEeCcCCCCcccccceEEEEccCCe------------E
Q 048803 81 YRITVLELGSGEWSE-LPPIPGFPDGLPLFCQLSAV-GPELVVIGGLDLTTWEASSSVFVFNIISAT------------W 146 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~-~~~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~------------W 146 (289)
..+.+.|..+.+... +..+|.+...+ ....+- +..+|+.+. ..+.+.+||..+.+ -
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~Ph---Gv~~sPDGk~v~V~~~-------~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPH---GCNMAPDKKHLCVAGK-------LSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCC---CEEECTTSSEEEEECT-------TSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred CcEEEEeCcccCCceeEEEEecCCCce---EEEEcCCCCEEEEeCC-------CCCeEEEEECcccccccccccCcccce
Confidence 357888998732212 11223322222 123333 345666654 46778999988652 1
Q ss_pred EeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCC--------CceEeCCCCCcccc-ccce------
Q 048803 147 RRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVAR--------DEWASLPDMSRERD-ECKA------ 211 (289)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~--------~~W~~~~~~~~~~~-~~~~------ 211 (289)
..-.+....| ...+..-+|.+|+.-..+ +.+.++|.++ +.+..+..++.... +|..
T Consensus 324 ~~~v~vG~gP---~h~aF~~dG~aY~t~~ld------sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t 394 (595)
T 1fwx_A 324 VAEPELGLGP---LHTAFDGRGNAYTSLFLD------SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGET 394 (595)
T ss_dssp EECCBCCSCE---EEEEECTTSEEEEEETTT------TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTS
T ss_pred EEEcCCCCCc---ceEEECCCCeEEEEEecC------CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceE
Confidence 1111222122 223333467889884433 4577788766 23544443332111 1111
Q ss_pred EEECC-EEEEEeeecCCCC----CcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeE
Q 048803 212 VFHCG-KLLVIGGYSTNAQ----GRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDL 271 (289)
Q Consensus 212 ~~~~~-~l~~~gG~~~~~~----~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~l 271 (289)
..-+| .||+..+...... ..--..-..||++.++=+.+...+ ....++.+.+...++|
T Consensus 395 ~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p--~~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 395 LDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGP--TFAEPHDAIAVHPSIL 457 (595)
T ss_dssp TTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEE--ESSCCCCEEEECTTTT
T ss_pred eCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEc--CCCCCCceEEccHHHc
Confidence 12344 4666655432110 000122378999888877776642 3455665555544443
No 293
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=42.21 E-value=1.4e+02 Score=24.40 Aligned_cols=71 Identities=8% Similarity=0.036 Sum_probs=39.9
Q ss_pred eCCEEEEEeCcCCCC--cccccceEEEEccCCeE-EeCCCCCCCCccceeEEEecCCE--EEEEcCCCCCCcccCceEEE
Q 048803 115 VGPELVVIGGLDLTT--WEASSSVFVFNIISATW-RRGADMPGGRRMLFGCASDGDRT--VYVAGGHDEDKNALKSAMAY 189 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~--~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~~~~~--iyv~GG~~~~~~~~~~~~~y 189 (289)
-++++|+........ ....++++++|..+.+- ..+ +.+. ...+.+..-+++ +|+..... +.+..+
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g~---~p~~i~~s~Dg~~~l~v~~~~~------~~V~Vi 346 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGH---DVDAISVAQDGGPDLYALSAGT------EVLHIY 346 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECCC---CcCeEEECCCCCeEEEEEcCCC------CeEEEE
Confidence 357899875421110 11356899999998875 333 2331 123444434555 55543222 369999
Q ss_pred EcCCCc
Q 048803 190 DVARDE 195 (289)
Q Consensus 190 d~~~~~ 195 (289)
|.++.+
T Consensus 347 D~~t~~ 352 (373)
T 2mad_H 347 DAGAGD 352 (373)
T ss_pred ECCCCC
Confidence 988764
No 294
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=42.19 E-value=1.3e+02 Score=23.99 Aligned_cols=123 Identities=9% Similarity=0.026 Sum_probs=62.8
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCC----CCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPG----GRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~----~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
++++|+.......+ . ..++.++ +++-...+.... .....++.++.-+++||++.... .......+..||+
T Consensus 27 ~g~~~v~~~~~~~~--~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~-~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQP--E-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGN-QSKSVPKLVAWDT 100 (343)
T ss_dssp TSCEEEEECGGGCC--S-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHH-HHTSCCEEEEEET
T ss_pred CCCEEEEeCCCCCC--c-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCC-CcCCCCeEEEEEC
Confidence 67898875322111 1 4677777 555554443210 11233455554468999984211 0001246999999
Q ss_pred CCCceEeCCCCC----ccccc-cceEEE--CCEEEEEeeecCCCCCcccceEEEEECCCCc-eeec
Q 048803 192 ARDEWASLPDMS----RERDE-CKAVFH--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ-WGPV 249 (289)
Q Consensus 192 ~~~~W~~~~~~~----~~~~~-~~~~~~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~-W~~~ 249 (289)
++++-...-.++ .+... ...++- ++.+|+...... ....|.+||+.+++ |..+
T Consensus 101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~-----~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD-----DKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG-----GGCEEEEEETTTCCEEEEC
T ss_pred CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC-----CCCeEEEEECCCCCEEEEe
Confidence 988633211111 11112 233333 478888753110 12368999998654 5544
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=41.74 E-value=1.3e+02 Score=23.94 Aligned_cols=106 Identities=7% Similarity=-0.095 Sum_probs=59.5
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEec-CCEEEEEcCCCCCCcccCceEEEEcCC
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDG-DRTVYVAGGHDEDKNALKSAMAYDVAR 193 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~yd~~~ 193 (289)
.++.||+.--. ....++++++....-+.+..-. .....+.++.. +++||+.-. ....++.+|+..
T Consensus 132 ~~g~ly~td~~------~~~~I~r~~~dG~~~~~~~~~~--l~~Pnglavd~~~~~lY~aD~------~~~~I~~~d~dG 197 (318)
T 3sov_A 132 SSGFMYWTDWG------EVPKIERAGMDGSSRFIIINSE--IYWPNGLTLDYEEQKLYWADA------KLNFIHKSNLDG 197 (318)
T ss_dssp GGTEEEEEECS------SSCEEEEEETTSCSCEEEECSS--CSCEEEEEEETTTTEEEEEET------TTTEEEEEETTS
T ss_pred CCCEEEEEecC------CCCEEEEEEcCCCCeEEEEECC--CCCccEEEEeccCCEEEEEEC------CCCEEEEEcCCC
Confidence 36889987421 2456888888643322221111 12235566653 789999832 235689999875
Q ss_pred CceEeCC--CCCccccccceEEECCEEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 194 DEWASLP--DMSRERDECKAVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 194 ~~W~~~~--~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
..-+.+. .+..| .++++.++.+|..--. ...|.++|+.+++
T Consensus 198 ~~~~~~~~~~~~~P---~glav~~~~lywtd~~--------~~~V~~~~~~~G~ 240 (318)
T 3sov_A 198 TNRQAVVKGSLPHP---FALTLFEDILYWTDWS--------THSILACNKYTGE 240 (318)
T ss_dssp CSCEEEECSCCSCE---EEEEEETTEEEEEETT--------TTEEEEEETTTCC
T ss_pred CceEEEecCCCCCc---eEEEEeCCEEEEEecC--------CCeEEEEECCCCC
Confidence 4333222 22222 3556678899988421 1367888875544
No 296
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=38.27 E-value=1.7e+02 Score=24.11 Aligned_cols=140 Identities=10% Similarity=0.155 Sum_probs=68.6
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccC---------CeEEeCCCCCCCCccceeEEEecCCEEEEEcCCCCCCc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIIS---------ATWRRGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKN 181 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t---------~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~ 181 (289)
++...++++|++=| ..+|+++... ..| +.+|. ....+.....++++|++-|.
T Consensus 185 Av~~~~g~~~fFkg---------~~~Wr~~~~~~~~~p~~I~~~w---pgLP~--~iDAa~~~~~~g~~~fFkg~----- 245 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD---------RFFWLKVSERPKTSVNLISSLW---PTLPS--GIEAAYEIEARNQVFLFKDD----- 245 (365)
T ss_dssp CEEEETTEEEEEET---------TEEEECCSSCCCCCEEEHHHHC---SSCCS--SCCEEEEEGGGTEEEEEETT-----
T ss_pred eEEEcCCeEEEEeC---------CEEEEEcCCCccCCccchhhhc---cCCCC--CccEEEEecCCCEEEEEeCC-----
Confidence 45567999999955 3345554332 224 33441 11222222137889998652
Q ss_pred ccCceEEEEcCCCc--e-EeCCC--CCccccccceEE-E--CCEEEEEeeecCCCCCcccceEEEEECCCCceee-----
Q 048803 182 ALKSAMAYDVARDE--W-ASLPD--MSRERDECKAVF-H--CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP----- 248 (289)
Q Consensus 182 ~~~~~~~yd~~~~~--W-~~~~~--~~~~~~~~~~~~-~--~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~----- 248 (289)
.++.|+..+.. + ..+.. +|..-...-+|+ . ++++|++-|. ..++||..+++-..
T Consensus 246 ---~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~----------~yw~yd~~~~~v~~gyPk~ 312 (365)
T 3ba0_A 246 ---KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN----------QYWRYDERRQMMDPGYPKL 312 (365)
T ss_dssp ---EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT----------EEEEEETTTTEECSSCCCC
T ss_pred ---EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC----------EEEEEeCCcceecCCCCcc
Confidence 35666543211 1 12222 222111222332 2 5899999653 57899976653211
Q ss_pred cccccccCCCCCCceeeee-CCeEEEEeCceeeccc
Q 048803 249 VEEDFMETATCPRSCAGVD-SNDLYMCREGDVMALR 283 (289)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~-~~~ly~~GG~~~~~~~ 283 (289)
+...-+....... +++.. ++++|++-|..-..++
T Consensus 313 I~~~f~g~p~~iD-aA~~~~~g~~YfFkg~~ywr~d 347 (365)
T 3ba0_A 313 ITKNFQGIGPKID-AVFYSKNKYYYFFQGSNQFEYD 347 (365)
T ss_dssp HHHHSTTCCSSCS-EEEEETTTEEEEEETTEEEEEE
T ss_pred hhhcCCCCCCccc-eeeEecCCcEEEEeCCEEEEEE
Confidence 1110011112222 34444 8999999987655554
No 297
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=37.71 E-value=1.7e+02 Score=24.06 Aligned_cols=106 Identities=8% Similarity=0.028 Sum_probs=54.6
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCe--E-EeCCCC--CCCC-ccceeEEEecCCEEEEEcCCCCCCcccCceEEE
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISAT--W-RRGADM--PGGR-RMLFGCASDGDRTVYVAGGHDEDKNALKSAMAY 189 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~--W-~~~~~~--~~~~-~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~y 189 (289)
++++|++-| +.+|+|+..+.. + +.+..+ |..+ ....+...-.++++|++-| +..+.|
T Consensus 236 ~g~~~fFkg---------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG--------~~yw~y 298 (365)
T 3ba0_A 236 RNQVFLFKD---------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD--------NQYWRY 298 (365)
T ss_dssp GTEEEEEET---------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET--------TEEEEE
T ss_pred CCEEEEEeC---------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC--------CEEEEE
Confidence 789999955 446676543211 1 223322 2111 1122222212689999955 258899
Q ss_pred EcCCCceEeCCC------CC-ccccccceEEE-CCEEEEEeeecCCCCCcccceEEEEECCCCceee
Q 048803 190 DVARDEWASLPD------MS-RERDECKAVFH-CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP 248 (289)
Q Consensus 190 d~~~~~W~~~~~------~~-~~~~~~~~~~~-~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~ 248 (289)
|..+++-..--| .| .+..--++... ++++|++-|. ..+.||..+++-..
T Consensus 299 d~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg~----------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 299 DERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQGS----------NQFEYDFLLQRITK 355 (365)
T ss_dssp ETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEETT----------EEEEEETTTTEEEE
T ss_pred eCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeCC----------EEEEEECCccEEec
Confidence 877654221101 01 01111222334 7899998653 57899987766443
No 298
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=37.11 E-value=1.6e+02 Score=23.48 Aligned_cols=130 Identities=10% Similarity=0.022 Sum_probs=71.9
Q ss_pred eCCEEEEEeCcCCCCcccccceEEEEccCCeEEeC--CCCCCCCccceeEEEe-cCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 115 VGPELVVIGGLDLTTWEASSSVFVFNIISATWRRG--ADMPGGRRMLFGCASD-GDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 115 ~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
.++.||+.-. ....++++++....-+.+ ..+. . ..+.++. .++.||+.--. ....++++++
T Consensus 89 ~~g~ly~~d~-------~~~~I~~~~~dG~~~~~l~~~~~~-~---P~giavdp~~g~ly~td~~-----~~~~I~r~~~ 152 (318)
T 3sov_A 89 LGEKLYWTDS-------ETNRIEVSNLDGSLRKVLFWQELD-Q---PRAIALDPSSGFMYWTDWG-----EVPKIERAGM 152 (318)
T ss_dssp TTTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCS-S---EEEEEEEGGGTEEEEEECS-----SSCEEEEEET
T ss_pred CCCeEEEEEC-------CCCEEEEEECCCCcEEEEEeCCCC-C---ccEEEEeCCCCEEEEEecC-----CCCEEEEEEc
Confidence 4789998743 245688888865432222 2222 1 2445553 26899998421 1246888888
Q ss_pred CCCceEeC--CCCCccccccceEE--ECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeee
Q 048803 192 ARDEWASL--PDMSRERDECKAVF--HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVD 267 (289)
Q Consensus 192 ~~~~W~~~--~~~~~~~~~~~~~~--~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 267 (289)
....=+.+ ..+..| .+.++ .+++||+.-.. .+.|+++|++...=+.+... ...++ .++++.
T Consensus 153 dG~~~~~~~~~~l~~P---nglavd~~~~~lY~aD~~--------~~~I~~~d~dG~~~~~~~~~---~~~~P-~glav~ 217 (318)
T 3sov_A 153 DGSSRFIIINSEIYWP---NGLTLDYEEQKLYWADAK--------LNFIHKSNLDGTNRQAVVKG---SLPHP-FALTLF 217 (318)
T ss_dssp TSCSCEEEECSSCSCE---EEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECS---CCSCE-EEEEEE
T ss_pred CCCCeEEEEECCCCCc---cEEEEeccCCEEEEEECC--------CCEEEEEcCCCCceEEEecC---CCCCc-eEEEEe
Confidence 74332222 122222 23333 26889998532 24799999875443333221 11222 356777
Q ss_pred CCeEEEEe
Q 048803 268 SNDLYMCR 275 (289)
Q Consensus 268 ~~~ly~~G 275 (289)
++.||+..
T Consensus 218 ~~~lywtd 225 (318)
T 3sov_A 218 EDILYWTD 225 (318)
T ss_dssp TTEEEEEE
T ss_pred CCEEEEEe
Confidence 88898884
No 299
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=33.35 E-value=1.7e+02 Score=22.81 Aligned_cols=17 Identities=24% Similarity=0.155 Sum_probs=12.6
Q ss_pred ceeEEEecCCEEEEEcCC
Q 048803 159 LFGCASDGDRTVYVAGGH 176 (289)
Q Consensus 159 ~~~~~~~~~~~iyv~GG~ 176 (289)
.|.++.. ++.+|..|-.
T Consensus 112 ~hs~al~-~G~v~~wG~n 128 (282)
T 3qhy_B 112 WASYALK-DGKVIAWGDD 128 (282)
T ss_dssp TEEEEEE-TTEEEEEECC
T ss_pred CEEEEEe-CCeEEEecCC
Confidence 4566776 8899998854
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=32.98 E-value=2e+02 Score=23.51 Aligned_cols=147 Identities=14% Similarity=0.105 Sum_probs=70.6
Q ss_pred ceeEEEEECCC--CCeEeCCCCCC--CCCCCCceeEEEE-e--CC--EEEEEeCcCCCCcccccceEEEEccCCeEEeCC
Q 048803 80 VYRITVLELGS--GEWSELPPIPG--FPDGLPLFCQLSA-V--GP--ELVVIGGLDLTTWEASSSVFVFNIISATWRRGA 150 (289)
Q Consensus 80 ~~~~~~~d~~~--~~W~~~~~~~~--~~~~~~~~~~~~~-~--~~--~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~ 150 (289)
.-.++++|+.+ .+-+++..... ....+.. +.+.. . ++ +|||+.-... ...-+++.+|+.++..+.+.
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~P-hGi~~~~d~dg~~~L~Vvnh~~~---~s~ielf~~d~~~~~~~~~~ 157 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNP-HGISTFIDDDNTVYLLVVNHPGS---SSTVEVFKFQEEEKSLLHLK 157 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCE-EEEEEEECTTCCEEEEEEECSTT---CCEEEEEEEETTTTEEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceee-eeeEEEECCCCcEEEEEEECCCC---CCeEEEEEEECCCCEEEEEe
Confidence 35789999973 44444432211 1011111 12322 2 23 5888855321 13456777788766655443
Q ss_pred CCCCCC-ccceeEEEecCCEEEEEcCCC-CC----------CcccCceEEEEcCCCceEeCCCCCccccccceEEE--CC
Q 048803 151 DMPGGR-RMLFGCASDGDRTVYVAGGHD-ED----------KNALKSAMAYDVARDEWASLPDMSRERDECKAVFH--CG 216 (289)
Q Consensus 151 ~~~~~~-~~~~~~~~~~~~~iyv~GG~~-~~----------~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~ 216 (289)
.....+ ......++.-+|.+|+.+... .. ......++.||+. +.+.+. .....+....+ ++
T Consensus 158 ~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~---~~l~~pNGia~spDg 232 (355)
T 3sre_A 158 TIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVA---EGFDFANGINISPDG 232 (355)
T ss_dssp EECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEE---EEESSEEEEEECTTS
T ss_pred ccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEee---cCCcccCcceECCCC
Confidence 322112 222334444488988875421 10 0123457888874 333221 11111222222 44
Q ss_pred -EEEEEeeecCCCCCcccceEEEEECCC
Q 048803 217 -KLLVIGGYSTNAQGRFERHAEAFDAAA 243 (289)
Q Consensus 217 -~l~~~gG~~~~~~~~~~~~v~~yd~~~ 243 (289)
.||+.-... ..|++||...
T Consensus 233 ~~lYvadt~~--------~~I~~~~~~~ 252 (355)
T 3sre_A 233 KYVYIAELLA--------HKIHVYEKHA 252 (355)
T ss_dssp SEEEEEEGGG--------TEEEEEEECT
T ss_pred CEEEEEeCCC--------CeEEEEEECC
Confidence 677765322 4688998763
No 301
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=32.76 E-value=2e+02 Score=23.43 Aligned_cols=70 Identities=14% Similarity=0.039 Sum_probs=37.5
Q ss_pred CCEEEEEcCCCC---CCcccCceEEEEcCCCceEeCCCCCccccccceE-EECCE-EEEEeeecCCCCCcccceEEEEEC
Q 048803 167 DRTVYVAGGHDE---DKNALKSAMAYDVARDEWASLPDMSRERDECKAV-FHCGK-LLVIGGYSTNAQGRFERHAEAFDA 241 (289)
Q Consensus 167 ~~~iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~-l~~~gG~~~~~~~~~~~~v~~yd~ 241 (289)
++++|+...... +....+.+..+|+++.+= +..++.+....+.+ .-+|+ +++++... .+.|.+||.
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~-------~~~V~ViD~ 348 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAG-------TEVLHIYDA 348 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCC-------CCeEEEEEC
Confidence 578999754221 111235799999987643 22223222223333 33565 44443321 147999998
Q ss_pred CCCc
Q 048803 242 AAQQ 245 (289)
Q Consensus 242 ~~~~ 245 (289)
++.+
T Consensus 349 ~t~~ 352 (373)
T 2mad_H 349 GAGD 352 (373)
T ss_pred CCCC
Confidence 7765
No 302
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=31.98 E-value=2.1e+02 Score=23.33 Aligned_cols=26 Identities=15% Similarity=0.299 Sum_probs=17.9
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCceee
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP 248 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~ 248 (289)
+++.++.|+.++ .|.+||..+++-..
T Consensus 353 ~~~~l~s~s~dg--------~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 353 SDSVVMTGSYNN--------FFRMFDRNTKRDIT 378 (447)
T ss_dssp TSSEEEEECSTT--------EEEEEETTTCCEEE
T ss_pred CCCEEEEeccCC--------EEEEEEcCCCccee
Confidence 566667776542 68899998876543
No 303
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.62 E-value=24 Score=21.22 Aligned_cols=16 Identities=19% Similarity=0.683 Sum_probs=13.4
Q ss_pred CCCCChHHHHHHHhhc
Q 048803 3 LIPDLPNEIALECLSR 18 (289)
Q Consensus 3 ~~~~Lp~dl~~~il~~ 18 (289)
.+|.+|++++-+|++-
T Consensus 20 rFPEvPd~VVsqc~~q 35 (75)
T 2dae_A 20 KFPEVPEVVVSRCMLQ 35 (75)
T ss_dssp HSSSSCHHHHHHHHTT
T ss_pred hcccCcHHHHHHHHHH
Confidence 3689999999998874
No 304
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=30.94 E-value=3.3e+02 Score=25.41 Aligned_cols=25 Identities=8% Similarity=-0.092 Sum_probs=18.4
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCcee
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWG 247 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~ 247 (289)
+++.++.|+.++ .|..||..+++-.
T Consensus 222 dg~~lasgs~Dg--------~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 222 NSLHIITIHEDN--------SLVFWDANSGHMI 246 (902)
T ss_dssp TSSEEEEEETTC--------CEEEEETTTCCEE
T ss_pred CCCEEEEEECCC--------eEEEEECCCCcEE
Confidence 677788877653 5899999887643
No 305
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=30.07 E-value=1.9e+02 Score=24.42 Aligned_cols=116 Identities=12% Similarity=-0.027 Sum_probs=58.1
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccceeEEEec-CCEEEEEcCCCC---CCcccCceEEEEc
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLFGCASDG-DRTVYVAGGHDE---DKNALKSAMAYDV 191 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~---~~~~~~~~~~yd~ 191 (289)
...+||.-..... ..+.+.++|+.+++-...-+....+ +.+..- +.++||.-.... ..+..+.+..+|+
T Consensus 84 ~~~vyV~n~~~~~---~~~~VsVID~~t~~vv~~I~vG~~P----gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 84 ARRVYIQDPAHFA---AITQQFVIDGSTGRILGMTDGGFLP----HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp TTEEEEEECTTTC---SSEEEEEEETTTTEEEEEEEECSSC----EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCEEEEECCCcCC---CCCeEEEEECCCCEEEEEEECCCCC----ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 3467887542211 1178999999998753322222112 344333 456888742100 0012346999999
Q ss_pred CCCceE---eCCCCCc---cccccceEEE-CC-EEEEEeeecCCCCCcccceEEEEECCCCc
Q 048803 192 ARDEWA---SLPDMSR---ERDECKAVFH-CG-KLLVIGGYSTNAQGRFERHAEAFDAAAQQ 245 (289)
Q Consensus 192 ~~~~W~---~~~~~~~---~~~~~~~~~~-~~-~l~~~gG~~~~~~~~~~~~v~~yd~~~~~ 245 (289)
.+.+=. .++..+. ....+..++. +| ++|+..-.. .+.|.++|..+++
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~-------~~~VsVID~~t~k 211 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP-------APAVGVVDLEGKT 211 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS-------SCEEEEEETTTTE
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC-------CCeEEEEECCCCe
Confidence 988532 2221110 1112333332 44 677764211 1367888887765
No 306
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=29.63 E-value=2e+02 Score=22.45 Aligned_cols=148 Identities=9% Similarity=0.076 Sum_probs=70.9
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCC-EEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccc
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGP-ELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRML 159 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~ 159 (289)
..++++|..+++-+.+. . . .....+-++ .|+.+...... ....++++|..+++.+.+...+. .
T Consensus 43 ~~l~~~d~~~~~~~~l~-----~--~--~~~~~SpDg~~la~~~~~~~~---~~~~l~~~~~~~g~~~~l~~~~~----~ 106 (347)
T 2gop_A 43 NTIVIENLKNNARRFIE-----N--A--TMPRISPDGKKIAFMRANEEK---KVSEIWVADLETLSSKKILEAKN----I 106 (347)
T ss_dssp EEEEEEETTTCCEEEEE-----S--C--EEEEECTTSSEEEEEEEETTT---TEEEEEEEETTTTEEEEEEEESE----E
T ss_pred ceEEEEeCCCCceEEcc-----c--C--CCeEECCCCCEEEEEEeccCC---CcceEEEEECCCCceEEEEcCCC----c
Confidence 67889999888766551 0 0 011122234 45444321111 24568999998888766654331 2
Q ss_pred eeEEEecCCE-EEEEcCCC-C--------------CC-----cccCceEEEEcCCCce-EeCCCCCccccccceEEECCE
Q 048803 160 FGCASDGDRT-VYVAGGHD-E--------------DK-----NALKSAMAYDVARDEW-ASLPDMSRERDECKAVFHCGK 217 (289)
Q Consensus 160 ~~~~~~~~~~-iyv~GG~~-~--------------~~-----~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~ 217 (289)
......-+++ |++..... . .. .....++.+|+.+++- ..+.. + .....+...+.
T Consensus 107 ~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg 182 (347)
T 2gop_A 107 RSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDK 182 (347)
T ss_dssp EEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTE
T ss_pred cceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCe
Confidence 2233322554 44443110 0 00 0124688899988876 54433 2 22222233333
Q ss_pred EEEEeeecCCCCCcc-cceEEEEECCCCceeecc
Q 048803 218 LLVIGGYSTNAQGRF-ERHAEAFDAAAQQWGPVE 250 (289)
Q Consensus 218 l~~~gG~~~~~~~~~-~~~v~~yd~~~~~W~~~~ 250 (289)
+++.+.......... ...++.+| ++++..+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 183 IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred EEEEEecccccccccccccEEEeC--CCceEEec
Confidence 555553322100001 24677888 66666554
No 307
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=28.45 E-value=3.4e+02 Score=24.68 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=51.8
Q ss_pred eeEEEEECCCC--Ce--EeCCCCCCCCCCCCceeEEE-EeCCEEEEEeCcCCCCcccccceEEEEccC-CeEEe-C-CCC
Q 048803 81 YRITVLELGSG--EW--SELPPIPGFPDGLPLFCQLS-AVGPELVVIGGLDLTTWEASSSVFVFNIIS-ATWRR-G-ADM 152 (289)
Q Consensus 81 ~~~~~~d~~~~--~W--~~~~~~~~~~~~~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t-~~W~~-~-~~~ 152 (289)
.+++++|..+. .+ +.+.+-.. .. ..... ..++.||+..-.+.. ....++++|..+ ..|+. + +.-
T Consensus 295 ~~l~~~d~~~~~~~~~~~~l~~~~~--~~---~~s~~~~~g~~l~~~t~~~~a---~~~~L~~~d~~~~~~~~~~li~~~ 366 (751)
T 2xe4_A 295 AEVHLLDLRKGNAHNTLEIVRPREK--GV---RYDVQMHGTSHLVILTNEGGA---VNHKLLIAPRGQPSDWSHVLVDHS 366 (751)
T ss_dssp EEEEEEESSSCTTCCCEEESSCCCT--TC---CEEEEEETTTEEEEEECTTTC---TTCEEEEEETTSTTCCCCEEECCC
T ss_pred ceEEEEECCCCCCCceeEEeecCCC--Cc---eEEEeeeeCCEEEEEeCCCCC---CCcEEEEEcCCCcccceeeEECCC
Confidence 67888898765 45 55533211 11 11222 347888888654311 245788889876 57865 3 322
Q ss_pred CCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEc
Q 048803 153 PGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDV 191 (289)
Q Consensus 153 ~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 191 (289)
. ......... .++.|++....+. ...+..+|+
T Consensus 367 ~--~~~l~~~~~-~~~~lv~~~~~~g----~~~l~~~dl 398 (751)
T 2xe4_A 367 E--DVFMESIAV-RSNYLVVAGRRAG----LTRIWTMMA 398 (751)
T ss_dssp S--SEEEEEEEE-CSSEEEEEEEETT----EEEEEEEEC
T ss_pred C--CcEEEEEEE-ECCEEEEEEEeCC----EEEEEEEec
Confidence 1 112223333 3677777654322 346888886
No 308
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=28.14 E-value=2.8e+02 Score=23.68 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=29.0
Q ss_pred eEEEEECCCCCeEe--CCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe
Q 048803 82 RITVLELGSGEWSE--LPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT 145 (289)
Q Consensus 82 ~~~~~d~~~~~W~~--~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~ 145 (289)
..+.||..+++... .+.+|. . . ++....+++|++-| +..++||+.+.+
T Consensus 168 ~yw~yd~~~~~~~~~~w~gi~~--i-D----AA~~~~g~~YfFkG---------~~y~rfd~~~~~ 217 (460)
T 1qhu_A 168 RKWFWDLTTGTKKERSWPAVGN--C-T----SALRWLGRYYCFQG---------NQFLRFNPVSGE 217 (460)
T ss_dssp EEEEEETTTTEEEEECCTTSCC--C-S----EEEEETTEEEEEET---------TEEEEECTTTCC
T ss_pred cEEEEecccceeecccCCCCCc--c-c----hheeeCCceEEEEC---------CEEEEEcCccCc
Confidence 56788987765331 233332 1 1 55566799999966 446677765543
No 309
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=26.92 E-value=3.5e+02 Score=24.30 Aligned_cols=143 Identities=8% Similarity=0.114 Sum_probs=67.7
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCC-eE--EeC----CCCCCCCccceeEEEecCCEEEEEcCCCCCCccc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISA-TW--RRG----ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNAL 183 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~-~W--~~~----~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 183 (289)
++...++++|++-| +.+|+++.... .. ..+ +.+|. ....+.....++++|++-|
T Consensus 448 Ait~~rg~~yfFKg---------~~yWr~~~~~~~~~~P~~Is~~wp~LP~--~IDAA~~~~~~~k~yFFkG-------- 508 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD---------RFIWRTVTPRDKPMGPLLVATFWPELPE--KIDAVYEAPQEEKAVFFAG-------- 508 (631)
T ss_dssp EEEECSSSEEEECS---------SEEEEESCTTSCCEEEEEGGGTCTTSCS--SCSBCCEETTTTEEEEEET--------
T ss_pred eeEecCCcEEEEcC---------CEEEEEcCCCCCCCCceeccccCCCCCc--cceEEEEECCCCEEEEEec--------
Confidence 56677899999955 34566554331 11 111 23331 1122222213678999855
Q ss_pred CceEEEEcCCC--ce-EeCCC--CCccccccceEE---ECCEEEEEeeecCCCCCcccceEEEEECCCCcee-----ecc
Q 048803 184 KSAMAYDVARD--EW-ASLPD--MSRERDECKAVF---HCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWG-----PVE 250 (289)
Q Consensus 184 ~~~~~yd~~~~--~W-~~~~~--~~~~~~~~~~~~---~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~-----~~~ 250 (289)
+..+.|+..+- -+ ..+.. +|......-+|. .++++|++-|. ..++||..+++=. .+.
T Consensus 509 ~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~----------~ywryd~~~~~vd~gYPk~i~ 578 (631)
T 1ck7_A 509 NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD----------KFWRYNEVKKKMDPGFPKLIA 578 (631)
T ss_dssp TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT----------EEEEEETTTTEECTTCCEETT
T ss_pred CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC----------EEEEEcCCcccccCCCCcchH
Confidence 24777874210 00 01111 111101112222 36899999763 5788997654211 111
Q ss_pred cccccCCCCCCceeeee--CCeEEEEeCceeeccc
Q 048803 251 EDFMETATCPRSCAGVD--SNDLYMCREGDVMALR 283 (289)
Q Consensus 251 ~~~~~~~~~~~~~~~~~--~~~ly~~GG~~~~~~~ 283 (289)
..-+...... -+++.. ++++|++-|..-..++
T Consensus 579 ~~w~G~p~~i-DAAf~~~~~g~~YFFkG~~Ywr~d 612 (631)
T 1ck7_A 579 DAWNAIPDNL-DAVVDLQGGGHSYFFKGAYYLKLE 612 (631)
T ss_dssp TSCSSCCTTC-CEEECCTTSCBCEEEETTEEECCB
T ss_pred hhcCCCCCCC-cEeEEEcCCCeEEEEECCEEEEEe
Confidence 1101111122 234443 4899999997665554
No 310
>2l9b_B MRNA 3'-END-processing protein RNA14; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=26.11 E-value=33 Score=19.14 Aligned_cols=20 Identities=30% Similarity=0.484 Sum_probs=14.5
Q ss_pred CCChHHHHHHHhhcCChhhHH
Q 048803 5 PDLPNEIALECLSRVSYKQFA 25 (289)
Q Consensus 5 ~~Lp~dl~~~il~~lp~~~l~ 25 (289)
+.+|+||++ +|.-||.+.+.
T Consensus 5 ~~iP~eI~d-LL~vLPKRQYF 24 (53)
T 2l9b_B 5 SELPTEVLD-LLSVIPKRQYF 24 (53)
T ss_dssp -CCCHHHHH-HHHHSBCGGGG
T ss_pred CCCCHHHHH-HHHHcchHhhh
Confidence 568998875 58889987664
No 311
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=26.08 E-value=2.8e+02 Score=22.98 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=45.7
Q ss_pred CCEEEEEe-CcCCC----Cc---ccccceEEEEccCC--eEEeCCCCC----CCCccceeEEEe-c-------CCEEEEE
Q 048803 116 GPELVVIG-GLDLT----TW---EASSSVFVFNIISA--TWRRGADMP----GGRRMLFGCASD-G-------DRTVYVA 173 (289)
Q Consensus 116 ~~~lyv~G-G~~~~----~~---~~~~~~~~yd~~t~--~W~~~~~~~----~~~~~~~~~~~~-~-------~~~iyv~ 173 (289)
.++|+|+- |..+. .. ....++.+||+.|+ +-.+.-.+| .+........+. . ++.+|+.
T Consensus 97 ~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYIt 176 (381)
T 3q6k_A 97 CRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYIT 176 (381)
T ss_dssp TCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEE
T ss_pred CCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEE
Confidence 68999995 33211 11 24568999999999 643322222 122222333433 1 3567776
Q ss_pred cCCCCCCcccCceEEEEcCCC-ceEeCC
Q 048803 174 GGHDEDKNALKSAMAYDVARD-EWASLP 200 (289)
Q Consensus 174 GG~~~~~~~~~~~~~yd~~~~-~W~~~~ 200 (289)
-- ....+.+||.+++ .|+...
T Consensus 177 D~------~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 177 NF------LRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp ET------TTTEEEEEETTTTEEEEEEC
T ss_pred cC------CCCcEEEEECCCCcEEEEcc
Confidence 31 2346999999987 598764
No 312
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=26.07 E-value=4.1e+02 Score=24.83 Aligned_cols=94 Identities=16% Similarity=0.190 Sum_probs=44.8
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCCCcccccceEEEEccCCeEEeCCCCCCCCccce
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLTTWEASSSVFVFNIISATWRRGADMPGGRRMLF 160 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~~~ 160 (289)
..+.+||..+.+-... ++.. .. -..++...++.++.|+. -..+.+||..+.+-...-..+ . ...
T Consensus 39 g~I~lw~~~~~~~~~~--~~~~--~~--V~~l~fspg~~L~S~s~-------D~~v~lWd~~~~~~~~~~~~~-~--~V~ 102 (902)
T 2oaj_A 39 GEVHIYGQQQVEVVIK--LEDR--SA--IKEMRFVKGIYLVVINA-------KDTVYVLSLYSQKVLTTVFVP-G--KIT 102 (902)
T ss_dssp SEEEEECSTTCEEEEE--CSSC--CC--EEEEEEETTTEEEEEET-------TCEEEEEETTTCSEEEEEECS-S--CEE
T ss_pred CEEEEEeCCCcEEEEE--cCCC--CC--EEEEEEcCCCEEEEEEC-------cCeEEEEECCCCcEEEEEcCC-C--CEE
Confidence 4677788765543221 1111 11 11233233554444442 345788898876532111111 1 112
Q ss_pred eEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCce
Q 048803 161 GCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEW 196 (289)
Q Consensus 161 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 196 (289)
+++..-++...+.|+.+. .+..||..+..-
T Consensus 103 ~v~~sp~g~~l~sgs~dg------~V~lwd~~~~~~ 132 (902)
T 2oaj_A 103 SIDTDASLDWMLIGLQNG------SMIVYDIDRDQL 132 (902)
T ss_dssp EEECCTTCSEEEEEETTS------CEEEEETTTTEE
T ss_pred EEEECCCCCEEEEEcCCC------cEEEEECCCCcc
Confidence 222222566666665443 388888887653
No 313
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=26.06 E-value=3.1e+02 Score=23.37 Aligned_cols=124 Identities=15% Similarity=0.162 Sum_probs=65.3
Q ss_pred eCCCCCCCCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCCceE--------eCCC-CCccccccceEEECCEE
Q 048803 148 RGADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARDEWA--------SLPD-MSRERDECKAVFHCGKL 218 (289)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~--------~~~~-~~~~~~~~~~~~~~~~l 218 (289)
+++..+ .....|+.+.+ ++.=|++|-...+-.+...-..|= ++.|. .+++ ....-...+.-.++|+|
T Consensus 276 ~L~~i~-~vTe~HSFa~i-~~~~fa~GyHnGDv~PRe~G~~yf--s~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvL 351 (670)
T 3ju4_A 276 DLGLIP-SVTEVHSFATI-DNNGFAMGYHQGDVAPREVGLFYF--PDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVL 351 (670)
T ss_dssp ECCSCT-TCSEEEEEEEC-SSSCEEEEEEECSSSSCEEEEEEE--TTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEE
T ss_pred cccccc-ceeeeeeeeEe-cCCceEEEeccCCCCcceeeEEEe--cccccCCcceeeeechhhhccccccchhhhhCCEE
Confidence 344444 34456777764 665677775443322222223332 22332 2221 11112234455689999
Q ss_pred EEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCceeeeeCCeEEEEeCcee
Q 048803 219 LVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRSCAGVDSNDLYMCREGDV 279 (289)
Q Consensus 219 ~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~ly~~GG~~~ 279 (289)
|++-.-.... +.-..+..-+.....|+.+.-+ ...++..--.+..++.||++|-.+.
T Consensus 352 yLtTRgt~~~--~~GS~L~rs~d~Gq~w~slrfp--~nvHhtnlPFakvgD~l~mFgsERA 408 (670)
T 3ju4_A 352 YLITRGTRGD--RLGSSLHRSRDIGQTWESLRFP--HNVHHTTLPFAKVGDDLIMFGSERA 408 (670)
T ss_dssp EEEEEESCTT--SCCCEEEEESSTTSSCEEEECT--TCCCSSCCCEEEETTEEEEEEECSS
T ss_pred EEEecCcCCC--CCcceeeeecccCCchhheecc--ccccccCCCcceeCCEEEEEecccc
Confidence 9987543321 1234567777778899988753 2111111124456999999997554
No 314
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=25.27 E-value=3.9e+02 Score=24.38 Aligned_cols=37 Identities=14% Similarity=0.286 Sum_probs=22.4
Q ss_pred CCEEEEEeeecCCCCCcccceEEEEECCCCceeeccc
Q 048803 215 CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEE 251 (289)
Q Consensus 215 ~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 251 (289)
++.||+.........+.....++..+-...+|+.+..
T Consensus 256 ~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~ 292 (763)
T 3a0f_A 256 NGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITP 292 (763)
T ss_dssp TSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCT
T ss_pred CCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCC
Confidence 6788887532110000012468888888899999864
No 315
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=23.46 E-value=2.2e+02 Score=20.86 Aligned_cols=63 Identities=13% Similarity=0.069 Sum_probs=36.0
Q ss_pred CCEEEEEeCcCCCCcccccceEEEEccCCeEEe-----CCCCCCCCccceeEEEecCC-EEEEEcCCCCCCcccCceEEE
Q 048803 116 GPELVVIGGLDLTTWEASSSVFVFNIISATWRR-----GADMPGGRRMLFGCASDGDR-TVYVAGGHDEDKNALKSAMAY 189 (289)
Q Consensus 116 ~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~W~~-----~~~~~~~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~y 189 (289)
++++|++-| ++.|+||..+++-.. +...+..+....++....++ ++|.+-| +..+.|
T Consensus 109 ~g~~yfFkG---------~~yw~yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFkg--------~~y~r~ 171 (196)
T 3c7x_A 109 NGKTYFFRG---------NKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYKG--------NKYWKF 171 (196)
T ss_dssp TTEEEEEET---------TEEEEEETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEET--------TEEEEE
T ss_pred CCEEEEEEC---------CEEEEEeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEEC--------CEEEEE
Confidence 589999955 557899987765321 11111112122222222244 8999855 247889
Q ss_pred EcCCCc
Q 048803 190 DVARDE 195 (289)
Q Consensus 190 d~~~~~ 195 (289)
|..+.+
T Consensus 172 d~~~~~ 177 (196)
T 3c7x_A 172 NNQKLK 177 (196)
T ss_dssp ETTTTE
T ss_pred ECCcce
Confidence 987764
No 316
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=23.08 E-value=3.1e+02 Score=22.47 Aligned_cols=135 Identities=6% Similarity=-0.066 Sum_probs=61.7
Q ss_pred cceEEEEccCCeE-EeCCCCCCCCccceeEEEecCCEEEEEcCCCCC------CcccCceEEEEcCCCceEeCC--CCCc
Q 048803 134 SSVFVFNIISATW-RRGADMPGGRRMLFGCASDGDRTVYVAGGHDED------KNALKSAMAYDVARDEWASLP--DMSR 204 (289)
Q Consensus 134 ~~~~~yd~~t~~W-~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~------~~~~~~~~~yd~~~~~W~~~~--~~~~ 204 (289)
..+.++|+.|++- ..+..-..........+..-++.+.+.+..... ......+..+|+.+..-..+- .+|.
T Consensus 203 ~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~ 282 (356)
T 2w18_A 203 NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPP 282 (356)
T ss_dssp SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCT
T ss_pred CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccC
Confidence 4578899998874 333211100111111222237777665442110 112235667888776432211 1232
Q ss_pred cccccc-eEEECCEEEEEeeecCCCCCcccceEEEEECCCCceeecccccccCCCCCCc-eeeeeCCeEEEEeCcee
Q 048803 205 ERDECK-AVFHCGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGPVEEDFMETATCPRS-CAGVDSNDLYMCREGDV 279 (289)
Q Consensus 205 ~~~~~~-~~~~~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~~~~ly~~GG~~~ 279 (289)
.+.... ....++.+.+.|+.+ +.|..+|..+++-...-. ........ .++..+++.++.|+.|.
T Consensus 283 Gh~~~~lsg~~sg~~lASgS~D--------gTIkIWDl~tGk~l~tL~---gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 283 GQAGRFLEGDVKDHCAAAILTS--------GTIAIWDLLLGQCTALLP---PVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp TCCCCEEEEEEETTEEEEEETT--------SCEEEEETTTCSEEEEEC---CC--CCCCEEEECSSSSEEEEECTTS
T ss_pred CCcceeEccccCCCEEEEEcCC--------CcEEEEECCCCcEEEEec---CCCCCeEEEEEECCCCCEEEEEECCC
Confidence 322111 111123345555443 268899999887433211 11111122 24556888888888765
No 317
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=22.70 E-value=4.1e+02 Score=23.70 Aligned_cols=157 Identities=10% Similarity=0.041 Sum_probs=76.1
Q ss_pred eeEEEEECCCCCeEeCCCCCCCCCCCCceeEEEEeCCEEEEEeCcCCC-----CcccccceEEEEccCCeE--EeCCCCC
Q 048803 81 YRITVLELGSGEWSELPPIPGFPDGLPLFCQLSAVGPELVVIGGLDLT-----TWEASSSVFVFNIISATW--RRGADMP 153 (289)
Q Consensus 81 ~~~~~~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~-----~~~~~~~~~~yd~~t~~W--~~~~~~~ 153 (289)
..++++|..+++..... ++...... ..-+.+..||........ ......++++++..+..= +.+...+
T Consensus 155 ~~i~v~dl~tg~~~~~~-~~~~k~~~----~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~ 229 (693)
T 3iuj_A 155 REIHLMDVESKQPLETP-LKDVKFSG----ISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAI 229 (693)
T ss_dssp EEEEEEETTTCSEEEEE-EEEEESCC----CEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCS
T ss_pred EEEEEEECCCCCCCccc-cCCceecc----EEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecC
Confidence 67888999988865431 21110110 122334456655332210 001345688888776542 1221111
Q ss_pred C-CCccceeEEEecCCEEEEEcCCCCCCcccCceEEEEcCCC--ceEeCCCCCccccccceEEECCEEEEEeeecCCCCC
Q 048803 154 G-GRRMLFGCASDGDRTVYVAGGHDEDKNALKSAMAYDVARD--EWASLPDMSRERDECKAVFHCGKLLVIGGYSTNAQG 230 (289)
Q Consensus 154 ~-~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~l~~~gG~~~~~~~ 230 (289)
. .+....+....-+++..++...... ..+.++.+|..+. .|..+.+........ ....++++|+....+..
T Consensus 230 ~~~~~~~~~~~~SpDg~~l~~~~~~~~--~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~--- 303 (693)
T 3iuj_A 230 PAQHHRYVGATVTEDDRFLLISAANST--SGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAP--- 303 (693)
T ss_dssp GGGCCSEEEEEECTTSCEEEEEEESSS--SCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCT---
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEccCC--CCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCC---
Confidence 1 0111223333345653333221111 1246888998765 677664322221111 23457888888654321
Q ss_pred cccceEEEEECCCC---ceeecc
Q 048803 231 RFERHAEAFDAAAQ---QWGPVE 250 (289)
Q Consensus 231 ~~~~~v~~yd~~~~---~W~~~~ 250 (289)
...|...|.++. .|+.+.
T Consensus 304 --~~~l~~~d~~~~~~~~~~~l~ 324 (693)
T 3iuj_A 304 --NRRLVTVDAANPGPAHWRDLI 324 (693)
T ss_dssp --TCEEEEEETTSCCGGGCEEEE
T ss_pred --CCEEEEEeCCCCCccccEEEe
Confidence 246889998763 477654
No 318
>2lh0_A Histone chaperone RTT106; chromosomal protein, nucleus, phosphoprotein, transcription, transcription regulation, transposition; NMR {Saccharomyces cerevisiae}
Probab=22.24 E-value=54 Score=19.71 Aligned_cols=30 Identities=13% Similarity=0.203 Sum_probs=21.6
Q ss_pred CCCChHHHHHHHhhcCC--hhhHHHHHHHhhh
Q 048803 4 IPDLPNEIALECLSRVS--YKQFATISSVCKG 33 (289)
Q Consensus 4 ~~~Lp~dl~~~il~~lp--~~~l~~~~~v~k~ 33 (289)
|..||.||-..|.+-+. ++++.-|.-+..-
T Consensus 9 L~~LP~~Lq~kV~aIV~~~PsSl~VF~~Ly~y 40 (70)
T 2lh0_A 9 LDELPESLSRKIGTVVRVLPSSLEIFEELYKY 40 (70)
T ss_dssp GGGSCHHHHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHhCccHHHHHHHHHHH
Confidence 77899999999887653 4566666666554
No 319
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=21.97 E-value=3.8e+02 Score=22.97 Aligned_cols=70 Identities=9% Similarity=-0.002 Sum_probs=36.1
Q ss_pred CCEEEEEcCCCCCCcccCceEEEEcCCC----ceEe-CC--CCC--ccc-cccce-EEECCEEEEEeeecCCCCCcccce
Q 048803 167 DRTVYVAGGHDEDKNALKSAMAYDVARD----EWAS-LP--DMS--RER-DECKA-VFHCGKLLVIGGYSTNAQGRFERH 235 (289)
Q Consensus 167 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~----~W~~-~~--~~~--~~~-~~~~~-~~~~~~l~~~gG~~~~~~~~~~~~ 235 (289)
..++|+-|..+ +.++++|.+++ +=.+ +. .+. ... ..|+. +.-+| ||+..--+.. +...+.
T Consensus 95 r~~l~v~~l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~--g~~~g~ 165 (462)
T 2ece_A 95 RRFLIVPGLRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEE--GEGPGG 165 (462)
T ss_dssp SCEEEEEBTTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETT--SCSCCE
T ss_pred CCEEEEccCCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcC--CCCCCe
Confidence 45677776654 35999999876 2221 11 010 011 12233 23355 7774322211 223467
Q ss_pred EEEEECCCCc
Q 048803 236 AEAFDAAAQQ 245 (289)
Q Consensus 236 v~~yd~~~~~ 245 (289)
+..+|.++.+
T Consensus 166 v~vlD~~T~~ 175 (462)
T 2ece_A 166 ILMLDHYSFE 175 (462)
T ss_dssp EEEECTTTCC
T ss_pred EEEEECCCCe
Confidence 9999988764
No 320
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=21.94 E-value=2.5e+02 Score=20.98 Aligned_cols=143 Identities=9% Similarity=0.150 Sum_probs=68.3
Q ss_pred EEEEeCCEEEEEeCcCCCCcccccceEEEEccCCe-E--EeC----CCCCCCCccceeEEEecCCEEEEEcCCCCCCccc
Q 048803 111 QLSAVGPELVVIGGLDLTTWEASSSVFVFNIISAT-W--RRG----ADMPGGRRMLFGCASDGDRTVYVAGGHDEDKNAL 183 (289)
Q Consensus 111 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~yd~~t~~-W--~~~----~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 183 (289)
++...++++|++-| +.+|+++..... . ..+ +.++ .....+.....++++|++-|
T Consensus 35 Ai~~~~g~~~fFkg---------~~~Wr~~~~~~~~~~P~~I~~~wp~lp--~~IDAA~~~~~~~k~yfFkG-------- 95 (218)
T 1gen_A 35 GIAQIRGEIFFFKD---------RFIWRTVTPRDKPMGPLLVATFWPELP--EKIDAVYEAPQEEKAVFFAG-------- 95 (218)
T ss_dssp EEEEETTEEEEEET---------TEEEEESSTTSCCEEEEEGGGTCTTSC--SCCSEEEEETTTTEEEEEET--------
T ss_pred EEEeCCCcEEEEEC---------CEEEEEeCCCCccCCCEEHHHhcCCCC--CCccEEEEECCCCEEEEEeC--------
Confidence 55667999999966 334444432211 1 111 3333 11122222213689999965
Q ss_pred CceEEEEcCCCc--e-EeCCC--CCccccccceEEE---CCEEEEEeeecCCCCCcccceEEEEECCCCceee-----cc
Q 048803 184 KSAMAYDVARDE--W-ASLPD--MSRERDECKAVFH---CGKLLVIGGYSTNAQGRFERHAEAFDAAAQQWGP-----VE 250 (289)
Q Consensus 184 ~~~~~yd~~~~~--W-~~~~~--~~~~~~~~~~~~~---~~~l~~~gG~~~~~~~~~~~~v~~yd~~~~~W~~-----~~ 250 (289)
+..+.||..+.. + ..+.. +|......-+|.. ++++|++-|. ..+.||..+++=.. +.
T Consensus 96 ~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~----------~ywr~d~~~~~v~~gyPr~i~ 165 (218)
T 1gen_A 96 NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD----------KFWRYNEVKKKMDPGFPKLIA 165 (218)
T ss_dssp TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT----------EEEEEETTTTEECSSCCEEHH
T ss_pred CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC----------EEEEEECccccccCCCCcchh
Confidence 247888742110 0 00111 1111112233332 6899999653 57889987653211 11
Q ss_pred cccccCCCCCCceeeee--CCeEEEEeCceeeccc
Q 048803 251 EDFMETATCPRSCAGVD--SNDLYMCREGDVMALR 283 (289)
Q Consensus 251 ~~~~~~~~~~~~~~~~~--~~~ly~~GG~~~~~~~ 283 (289)
..-+....... ++... ++.+|++-|..-..++
T Consensus 166 ~~w~g~p~~id-aAf~~~~~g~~YfFkg~~y~~~~ 199 (218)
T 1gen_A 166 DAWNAIPDNLD-AVVDLQGGGHSYFFKGAYYLKLE 199 (218)
T ss_dssp HHSSSCCSSCS-EEEECTTTCEEEEEETTEEEEEE
T ss_pred hccCCCCCCCC-EEEEEcCCCcEEEEECCEEEEEE
Confidence 10011112222 34443 4899999886655443
No 321
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=21.69 E-value=3.6e+02 Score=22.65 Aligned_cols=69 Identities=12% Similarity=0.187 Sum_probs=38.4
Q ss_pred CCEEEEEcCCCC---CCcccCceEEEEcCCCceEeCCCCCccccccceEE-ECCE--EEEEeeecCCCCCcccceEEEEE
Q 048803 167 DRTVYVAGGHDE---DKNALKSAMAYDVARDEWASLPDMSRERDECKAVF-HCGK--LLVIGGYSTNAQGRFERHAEAFD 240 (289)
Q Consensus 167 ~~~iyv~GG~~~---~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~--l~~~gG~~~~~~~~~~~~v~~yd 240 (289)
++++||.-.... +....+.+..+|..+.+ .+..++.+....++++ -+++ +|+.... .+.|.++|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--vv~~I~vg~~P~gia~spDg~~~lyv~n~~--------s~~VsVID 399 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--RINKIELGHEIDSINVSQDAEPLLYALSAG--------TQTLHIYD 399 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEEEEEECEEEECCSSSCEEEEEETT--------TTEEEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEECCCCe--EEEEEECCCCcCeEEEccCCCEEEEEEcCC--------CCeEEEEE
Confidence 578999743211 11123579999988764 3333443333333333 3454 6655432 24799999
Q ss_pred CCCCc
Q 048803 241 AAAQQ 245 (289)
Q Consensus 241 ~~~~~ 245 (289)
..+.+
T Consensus 400 ~~t~k 404 (426)
T 3c75_H 400 AATGE 404 (426)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 87655
Done!