Query 048805
Match_columns 364
No_of_seqs 183 out of 1759
Neff 11.2
Searched_HMMs 29240
Date Mon Mar 25 23:44:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048805.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048805hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pm0_A Cypib1, cytochrome P450 100.0 6.4E-60 2.2E-64 434.7 29.5 353 1-364 18-427 (507)
2 3swz_A Steroid 17-alpha-hydrox 100.0 2E-59 7E-64 429.8 30.3 351 1-363 17-420 (494)
3 3tbg_A Cytochrome P450 2D6; mo 100.0 1.3E-58 4.5E-63 423.0 31.9 353 1-364 19-418 (479)
4 3e6i_A CYPIIE1, P450-J, cytoch 100.0 2E-58 6.8E-63 421.5 31.1 348 1-363 19-412 (476)
5 3nxu_A Cytochrome P450 3A4; al 100.0 2.8E-58 9.6E-63 421.4 28.5 347 1-364 23-417 (485)
6 3ld6_A Lanosterol 14-alpha dem 100.0 4.2E-59 1.4E-63 423.8 21.7 341 1-363 21-397 (461)
7 2fdv_A Cytochrome P450 2A6; CY 100.0 5.1E-58 1.7E-62 418.4 28.9 350 1-364 19-414 (476)
8 1po5_A Cytochrome P450 2B4; ox 100.0 4E-58 1.4E-62 419.1 28.0 350 1-364 19-414 (476)
9 3czh_A Cytochrome P450 2R1; vi 100.0 1E-57 3.5E-62 416.6 30.0 350 1-363 21-418 (481)
10 2hi4_A Cytochrome P450 1A2; CY 100.0 1.4E-57 4.7E-62 417.4 30.5 342 1-354 25-399 (495)
11 1r9o_A Cytochrome P450 2C9; mo 100.0 8.6E-58 2.9E-62 417.1 27.1 349 1-363 20-414 (477)
12 3k9v_A 1,25-dihydroxyvitamin D 100.0 8.6E-57 2.9E-61 411.4 32.9 345 1-364 33-427 (482)
13 3qz1_A Steroid 21-hydroxylase; 100.0 4.9E-57 1.7E-61 414.3 24.7 345 6-363 37-423 (496)
14 3s79_A Cytochrome P450 19A1; o 100.0 1.5E-56 5.2E-61 411.8 27.5 349 1-364 54-434 (503)
15 3mdm_A Cholesterol 24-hydroxyl 100.0 5.2E-56 1.8E-60 403.2 30.1 337 11-363 9-385 (456)
16 3gw9_A Sterol 14alpha-demethyl 100.0 4.6E-57 1.6E-61 409.6 22.6 343 1-363 13-391 (450)
17 2ij2_A Cytochrome P450 BM3; mo 100.0 3E-55 1E-59 399.0 27.3 344 1-363 12-396 (470)
18 2cib_A Cytochrome P450 51; hem 100.0 1.5E-55 5.1E-60 399.6 24.7 340 1-363 14-390 (455)
19 2ve3_A Putative cytochrome P45 100.0 3.2E-55 1.1E-59 396.2 25.9 336 1-363 21-387 (444)
20 3dbg_A Putative cytochrome P45 100.0 2.1E-55 7.1E-60 400.2 21.5 337 1-363 32-406 (467)
21 3i3k_A Lanosterol 14-alpha dem 100.0 3.5E-55 1.2E-59 398.3 21.7 340 1-363 21-397 (461)
22 3n9y_A Cholesterol SIDE-chain 100.0 4.8E-54 1.6E-58 393.6 28.1 339 12-363 32-418 (487)
23 2cd8_A Cytochrome P450 monooxy 100.0 1.2E-50 4.1E-55 364.4 23.1 321 1-363 35-370 (436)
24 1jfb_A Nitric-oxide reductase 100.0 1.4E-49 4.8E-54 354.9 27.6 323 1-363 10-349 (404)
25 1izo_A P450bsbeta, cytochrome 100.0 2.3E-49 7.8E-54 355.0 25.2 324 1-363 9-355 (417)
26 3tyw_A Putative cytochrome P45 100.0 3.9E-49 1.3E-53 353.1 26.0 311 11-363 28-356 (417)
27 3dax_A Cytochrome P450 7A1; ch 100.0 2.8E-50 9.6E-55 369.0 18.4 331 1-354 23-386 (491)
28 3v8d_A Cholesterol 7-alpha-mon 100.0 1.2E-50 4E-55 371.3 15.7 331 1-354 23-386 (491)
29 3awm_A Fatty acid alpha-hydrox 100.0 5.7E-49 1.9E-53 352.2 25.3 323 1-363 8-353 (415)
30 2y5n_A MYCG, P-450-like protei 100.0 1.2E-48 4E-53 349.2 26.9 310 11-363 36-362 (417)
31 2zbx_A Cytochrome P450-SU1; be 100.0 1.1E-48 3.7E-53 349.5 25.8 311 11-364 23-352 (412)
32 1ued_A P450 OXYC, P450 monooxy 100.0 6.9E-49 2.4E-53 350.1 24.0 309 11-363 23-352 (406)
33 3aba_A Cytochrome P450; oxidor 100.0 1.4E-48 4.8E-53 347.8 25.7 306 11-363 18-344 (403)
34 3a4g_A Vitamin D hydroxylase; 100.0 1.2E-48 4.2E-53 348.7 24.7 308 11-363 19-343 (411)
35 2z36_A MOXA, cytochrome P450 t 100.0 1.6E-48 5.4E-53 348.2 25.4 310 11-363 21-352 (413)
36 1cpt_A Cytochrome P450-TERP; o 100.0 1.1E-48 3.7E-53 351.4 24.2 310 12-363 25-373 (428)
37 1odo_A Putative cytochrome P45 100.0 4.9E-49 1.7E-53 351.4 21.8 316 11-363 14-350 (408)
38 3tkt_A Cytochrome P450; aromat 100.0 2.1E-48 7E-53 351.3 24.1 309 14-364 47-396 (450)
39 3abb_A CYP105D6, cytochrome P4 100.0 5.4E-49 1.9E-53 351.2 20.1 309 11-363 23-349 (408)
40 3ejb_B Biotin biosynthesis cyt 100.0 3.3E-48 1.1E-52 346.1 24.5 309 11-364 12-341 (404)
41 1z8o_A 6-deoxyerythronolide B 100.0 5.5E-48 1.9E-52 344.2 24.2 305 11-363 13-347 (404)
42 4fb2_A P450CIN; heme, monooxyg 100.0 8.3E-49 2.8E-53 349.0 18.8 308 11-364 18-338 (398)
43 3oo3_A OXY protein; cytochrome 100.0 6.7E-48 2.3E-52 341.8 23.9 310 11-364 11-329 (384)
44 2xkr_A CYP142, putative cytoch 100.0 4.1E-48 1.4E-52 344.5 22.5 301 11-363 17-336 (398)
45 2z3t_A Cytochrome P450; monoxy 100.0 9.8E-48 3.4E-52 344.3 24.9 308 11-363 19-360 (425)
46 2wm5_A CYP124, putative cytoch 100.0 9.3E-48 3.2E-52 345.3 24.6 309 12-363 44-382 (435)
47 2xbk_A PIMD protein; epoxidati 100.0 2.7E-47 9.4E-52 338.8 26.7 303 11-363 25-349 (404)
48 1q5d_A P450 epoxidase; cytochr 100.0 5.7E-48 2E-52 345.6 21.8 308 11-363 25-361 (419)
49 1s1f_A Putative cytochrome P45 100.0 1.7E-47 5.9E-52 341.1 24.7 308 11-363 23-349 (406)
50 3b6h_A Prostacyclin synthase; 100.0 5.2E-48 1.8E-52 354.4 21.4 328 1-354 28-390 (498)
51 2dkk_A Cytochrome P450; CYP158 100.0 1.4E-47 4.9E-52 341.6 23.3 309 11-363 26-352 (411)
52 2uuq_A CYP130, cytochrome P450 100.0 3.9E-48 1.3E-52 345.8 19.6 317 2-363 11-357 (414)
53 1gwi_A CYP154C1, cytochrome P4 100.0 5.7E-48 1.9E-52 344.6 19.4 310 11-363 16-351 (411)
54 1lfk_A OXYB, P450 monooxygenas 100.0 9.1E-48 3.1E-52 342.1 20.3 309 11-363 12-343 (398)
55 3ivy_A Cytochrome P450 CYP125; 100.0 4E-47 1.4E-51 341.4 22.3 307 11-363 36-373 (433)
56 2jjn_A Cytochrome P450 113A1; 100.0 1.2E-46 4.2E-51 336.3 24.5 301 12-363 28-349 (411)
57 3nc3_A Cytochrome P450 CYPX; c 100.0 1.1E-47 3.7E-52 345.5 17.8 306 11-363 52-385 (441)
58 3buj_A CALO2; heme, iron, meta 100.0 8.6E-47 3E-51 335.9 23.0 303 11-363 12-339 (397)
59 3mgx_A Putative P450 monooxyge 100.0 3.1E-47 1.1E-51 339.6 18.4 305 11-363 36-360 (415)
60 1n97_A CYP175A1; electron tran 100.0 8.9E-48 3E-52 341.3 14.0 295 1-364 8-333 (389)
61 3r9b_A Cytochrome P450 164A2; 100.0 1.4E-46 5E-51 337.0 21.7 306 11-363 28-362 (418)
62 3lxh_A Cytochrome P450; heme, 100.0 1.2E-46 3.9E-51 337.5 20.6 308 11-363 37-361 (421)
63 3oft_A Cytochrome P450, CYP101 100.0 7.8E-47 2.7E-51 336.3 19.0 304 11-363 23-341 (396)
64 2zwu_A Camphor 5-monooxygenase 100.0 5.9E-47 2E-51 338.0 17.7 302 11-363 36-354 (415)
65 3dsk_A Cytochrome P450 74A, ch 100.0 1E-46 3.6E-51 345.5 19.4 343 1-354 37-405 (495)
66 3b98_A Prostaglandin I2 syntha 100.0 5.6E-47 1.9E-51 345.7 16.9 327 1-354 28-371 (475)
67 1n40_A P450 MT2, cytochrome P4 100.0 2.7E-46 9.1E-51 332.3 20.6 302 11-363 15-341 (396)
68 3rwl_A Cytochrome P450 alkane 100.0 1.9E-45 6.5E-50 329.4 23.7 309 11-363 37-372 (426)
69 3dan_A Cytochrome P450 74A2; A 100.0 1.3E-45 4.6E-50 336.4 19.5 341 1-354 18-388 (473)
70 3p3o_A Cytochrome P450; monoox 100.0 1.2E-45 4.3E-50 330.0 16.6 306 11-363 32-361 (416)
71 1io7_A Cytochrome P450 CYP119; 100.0 3.6E-44 1.2E-48 315.6 22.2 290 14-363 1-313 (368)
72 3b4x_A 367AA long hypothetical 100.0 4.9E-44 1.7E-48 314.4 20.7 289 14-363 1-313 (367)
73 2wiy_A XPLA-heme, cytochrome P 100.0 6.2E-44 2.1E-48 316.7 21.3 305 11-363 19-341 (394)
74 2rfb_A Cytochrome P450; heme, 100.0 6.6E-44 2.3E-48 311.0 18.9 275 23-363 2-291 (343)
75 4dnj_A Putative cytochrome P45 100.0 9E-42 3.1E-46 304.3 19.3 311 11-363 33-357 (412)
76 4dxy_A Cytochrome P450, CYP101 100.0 3.6E-37 1.2E-41 274.1 23.0 309 11-363 36-360 (417)
77 2yjn_B Erycii, DTDP-4-keto-6-d 100.0 1E-32 3.5E-37 240.4 0.5 264 1-363 44-329 (381)
78 1s79_A Lupus LA protein; RRM, 70.6 14 0.00047 24.7 6.1 40 13-52 23-70 (103)
79 2krb_A Eukaryotic translation 65.7 12 0.00039 23.5 4.7 40 14-53 20-66 (81)
80 1iqt_A AUF1, heterogeneous nuc 63.8 13 0.00043 22.8 4.6 41 13-53 11-60 (75)
81 2diu_A KIAA0430 protein; struc 60.8 5.8 0.0002 26.3 2.5 38 15-53 27-65 (96)
82 2mss_A Protein (musashi1); RNA 53.9 23 0.00078 21.6 4.5 40 13-52 11-59 (75)
83 1m46_B IQ4, IQ4 motif from MYO 52.9 12 0.0004 17.0 2.0 13 269-281 8-20 (26)
84 1x4c_A Splicing factor, argini 51.5 34 0.0012 22.8 5.4 41 13-53 27-69 (108)
85 3beg_B Splicing factor, argini 51.0 36 0.0012 23.0 5.5 40 14-53 29-70 (115)
86 2nlw_A Eukaryotic translation 50.2 19 0.00063 24.0 3.8 40 14-53 34-80 (105)
87 2dgx_A KIAA0430 protein; RRM d 49.7 20 0.00067 23.4 3.8 35 18-52 30-70 (96)
88 3d2w_A TAR DNA-binding protein 49.4 29 0.001 22.2 4.6 37 14-50 24-64 (89)
89 4fu3_A Regulation of nuclear P 49.1 29 0.00098 24.5 4.9 71 232-309 3-73 (135)
90 1sjq_A Polypyrimidine tract-bi 47.9 59 0.002 21.8 6.0 38 15-52 30-70 (105)
91 2a3j_A U1 small nuclear ribonu 47.9 21 0.00071 25.0 3.9 37 17-53 49-91 (127)
92 3s7r_A Heterogeneous nuclear r 44.8 32 0.0011 21.6 4.3 40 14-53 24-72 (87)
93 1nu4_A U1A RNA binding domain; 44.5 19 0.00065 23.4 3.1 37 17-53 28-70 (97)
94 2dgv_A HnRNP M, heterogeneous 44.4 52 0.0018 20.8 5.3 41 13-53 20-67 (92)
95 4f25_A Polyadenylate-binding p 44.3 42 0.0014 22.7 5.0 40 14-53 18-64 (115)
96 4fxv_A ELAV-like protein 1; RN 44.2 50 0.0017 21.6 5.2 40 14-53 32-80 (99)
97 2dgs_A DAZ-associated protein 44.1 58 0.002 21.1 5.6 42 13-54 22-72 (99)
98 2cpf_A RNA binding motif prote 42.1 54 0.0018 21.1 5.1 41 13-53 17-69 (98)
99 1whx_A Hypothetical protein ri 41.7 61 0.0021 21.7 5.5 41 13-53 22-65 (111)
100 2x1f_A MRNA 3'-END-processing 41.5 65 0.0022 20.7 5.5 40 14-53 15-63 (96)
101 3ex7_B RNA-binding protein 8A; 41.0 59 0.002 22.2 5.5 40 14-53 35-83 (126)
102 1whw_A Hypothetical protein ri 40.9 66 0.0023 20.7 5.5 40 14-53 21-69 (99)
103 2dnh_A Bruno-like 5, RNA bindi 40.8 46 0.0016 21.9 4.7 39 14-52 28-74 (105)
104 3mdf_A Peptidyl-prolyl CIS-tra 40.6 64 0.0022 20.0 5.3 39 14-52 20-67 (85)
105 1x4g_A Nucleolysin TIAR; struc 39.9 80 0.0027 20.9 6.1 40 14-53 38-80 (109)
106 1p27_B RNA-binding protein 8A; 39.8 55 0.0019 21.5 5.0 40 14-53 36-84 (106)
107 2cq3_A RNA-binding protein 9; 39.8 57 0.0019 21.3 5.0 40 14-53 28-74 (103)
108 2wbr_A GW182, gawky, LD47780P; 39.7 76 0.0026 20.6 6.0 39 14-52 20-61 (89)
109 2cqi_A Nucleolysin TIAR; RNA r 39.5 77 0.0026 20.6 5.8 39 14-52 28-73 (103)
110 1oo0_B CG8781-PA, drosophila Y 39.5 62 0.0021 21.4 5.3 39 14-52 39-86 (110)
111 2cph_A RNA binding motif prote 39.4 79 0.0027 20.7 6.2 40 14-53 28-77 (107)
112 2do4_A Squamous cell carcinoma 39.4 50 0.0017 21.4 4.7 40 14-53 30-77 (100)
113 2ytc_A PRE-mRNA-splicing facto 38.9 68 0.0023 19.8 5.7 41 13-53 24-67 (85)
114 1wex_A Hypothetical protein (r 38.6 62 0.0021 21.5 5.0 39 14-52 28-69 (104)
115 2hvz_A Splicing factor, argini 38.5 62 0.0021 21.0 5.0 41 13-53 12-56 (101)
116 2dgu_A Heterogeneous nuclear r 37.7 83 0.0029 20.5 6.0 40 14-53 24-64 (103)
117 2cqc_A Arginine/serine-rich sp 37.6 72 0.0024 20.3 5.2 40 14-53 28-76 (95)
118 2jwn_A Embryonic polyadenylate 37.3 62 0.0021 22.1 5.1 38 14-51 49-95 (124)
119 2xnq_A Nuclear polyadenylated 37.2 83 0.0028 20.3 5.6 40 14-53 36-76 (97)
120 1x4h_A RNA-binding protein 28; 36.9 79 0.0027 20.9 5.5 41 13-53 27-76 (111)
121 2div_A TRNA selenocysteine ass 36.3 62 0.0021 20.8 4.7 41 13-53 21-71 (99)
122 2dhg_A TRNA selenocysteine ass 36.3 78 0.0027 20.6 5.3 40 14-53 22-70 (104)
123 2ywk_A Putative RNA-binding pr 36.0 62 0.0021 20.6 4.7 39 14-52 29-75 (95)
124 2dgt_A RNA-binding protein 30; 35.9 77 0.0026 20.1 5.1 41 13-53 22-63 (92)
125 2dnq_A RNA-binding protein 4B; 35.4 83 0.0029 19.8 5.6 40 13-52 20-60 (90)
126 2dis_A Unnamed protein product 35.1 93 0.0032 20.4 5.6 41 13-53 20-71 (109)
127 2dnm_A SRP46 splicing factor; 34.8 48 0.0016 21.7 4.0 40 14-53 26-74 (103)
128 2kvi_A Nuclear polyadenylated 34.4 68 0.0023 20.6 4.6 40 14-53 24-64 (96)
129 1x5s_A Cold-inducible RNA-bind 34.3 83 0.0028 20.4 5.2 41 13-53 24-73 (102)
130 3r27_A HnRNP L, heterogeneous 34.3 1E+02 0.0035 20.4 5.4 40 14-53 34-76 (100)
131 1b35_D CRPV, protein (cricket 34.3 26 0.00088 19.5 1.9 25 1-26 32-56 (57)
132 2dh8_A DAZ-associated protein 34.3 79 0.0027 20.6 5.1 42 13-54 28-78 (105)
133 2jvr_A Nucleolar protein 3; RN 34.3 81 0.0028 21.3 5.0 40 14-53 41-86 (111)
134 2dnp_A RNA-binding protein 14; 34.1 88 0.003 19.7 6.0 40 14-53 22-62 (90)
135 3ulh_A THO complex subunit 4; 33.8 86 0.0029 20.5 5.2 39 15-53 43-89 (107)
136 2rs2_A Musashi-1, RNA-binding 33.7 83 0.0028 20.9 5.1 40 14-53 38-86 (109)
137 3md1_A Nuclear and cytoplasmic 33.7 71 0.0024 19.6 4.5 40 14-53 14-62 (83)
138 1x5u_A Splicing factor 3B subu 33.0 1E+02 0.0035 20.1 6.2 41 13-53 27-76 (105)
139 3bs9_A Nucleolysin TIA-1 isofo 32.9 89 0.003 19.4 5.0 41 13-53 18-67 (87)
140 2kxn_B Transformer-2 protein h 32.8 90 0.0031 21.6 5.3 40 14-53 59-107 (129)
141 2cq1_A PTB-like protein L; RRM 32.6 56 0.0019 21.6 4.0 38 15-52 29-69 (101)
142 2fy1_A RNA-binding motif prote 32.5 70 0.0024 21.6 4.6 41 13-53 19-67 (116)
143 2d9o_A DNAJ (HSP40) homolog, s 32.5 1.1E+02 0.0037 20.2 5.4 39 15-53 31-73 (100)
144 2e5h_A Zinc finger CCHC-type a 32.4 78 0.0027 20.1 4.7 41 13-53 28-77 (94)
145 2d9p_A Polyadenylate-binding p 32.2 48 0.0016 21.7 3.6 39 15-53 29-74 (103)
146 2jrs_A RNA-binding protein 39; 32.1 74 0.0025 21.1 4.6 40 13-52 38-86 (108)
147 3s8s_A Histone-lysine N-methyl 32.0 77 0.0026 21.2 4.7 40 14-53 19-67 (110)
148 3fgx_A Rbstp2171; structural g 31.9 34 0.0011 23.3 2.6 18 16-33 8-25 (114)
149 1u6f_A Tcubp1, RNA-binding pro 31.9 99 0.0034 21.5 5.5 39 15-53 56-103 (139)
150 1whv_A Poly(A)-specific ribonu 31.8 44 0.0015 22.2 3.1 39 15-53 29-68 (100)
151 1why_A Hypothetical protein ri 31.7 1E+02 0.0035 19.7 5.7 40 14-53 30-72 (97)
152 2cq4_A RNA binding motif prote 31.4 65 0.0022 21.5 4.3 38 14-51 38-84 (114)
153 2ad9_A Polypyrimidine tract-bi 31.2 64 0.0022 22.2 4.1 38 15-52 45-85 (119)
154 2dgo_A Cytotoxic granule-assoc 31.2 91 0.0031 20.8 5.0 40 14-53 28-76 (115)
155 2la4_A Nuclear and cytoplasmic 31.1 83 0.0028 20.3 4.7 39 14-52 40-81 (101)
156 2cqg_A TDP-43, TAR DNA-binding 31.0 93 0.0032 20.2 5.0 40 13-52 27-75 (103)
157 1uaw_A Mouse-musashi-1; RNP-ty 30.8 57 0.002 19.7 3.6 42 13-54 12-62 (77)
158 2dgp_A Bruno-like 4, RNA bindi 30.8 1E+02 0.0035 20.1 5.2 40 13-52 25-73 (106)
159 1sjr_A Polypyrimidine tract-bi 30.7 1.2E+02 0.0042 22.3 5.8 40 14-53 59-103 (164)
160 1rk8_A CG8781-PA, CG8781-PA pr 30.7 83 0.0028 22.9 5.0 41 13-53 84-133 (165)
161 3ucg_A Polyadenylate-binding p 30.3 97 0.0033 19.3 4.8 38 14-51 19-65 (89)
162 4a8x_A RNA-binding protein wit 30.3 1E+02 0.0034 19.1 5.4 40 14-53 17-66 (88)
163 2cqd_A RNA-binding region cont 30.2 1.2E+02 0.0041 20.2 5.6 41 14-54 30-79 (116)
164 1p1t_A Cleavage stimulation fa 29.9 71 0.0024 20.8 4.2 40 14-53 21-69 (104)
165 2ku7_A MLL1 PHD3-CYP33 RRM chi 29.7 1E+02 0.0035 21.3 5.3 40 14-53 76-124 (140)
166 3lqv_A PRE-mRNA branch site pr 29.5 1.3E+02 0.0043 20.0 6.5 39 14-52 21-65 (115)
167 2jvo_A Nucleolar protein 3; nu 28.8 85 0.0029 20.8 4.5 40 14-53 44-84 (108)
168 2i2y_A Fusion protein consists 28.6 1.6E+02 0.0053 20.8 7.2 40 14-53 86-129 (150)
169 1x4e_A RNA binding motif, sing 28.4 59 0.002 20.2 3.4 38 15-52 19-65 (85)
170 1x5p_A Negative elongation fac 28.0 1.1E+02 0.0038 19.5 4.9 39 15-53 27-68 (97)
171 1x4b_A Heterogeneous nuclear r 27.7 67 0.0023 21.5 3.8 40 14-53 40-88 (116)
172 1wf0_A TDP-43, TAR DNA-binding 27.4 45 0.0015 21.0 2.7 37 14-50 18-58 (88)
173 2cqb_A Peptidyl-prolyl CIS-tra 26.6 51 0.0017 21.5 2.9 40 14-53 25-73 (102)
174 2cpz_A CUG triplet repeat RNA- 26.6 79 0.0027 21.1 4.0 40 14-53 38-86 (115)
175 2do0_A HnRNP M, heterogeneous 26.6 1E+02 0.0035 20.4 4.6 39 14-52 28-74 (114)
176 2qfj_A FBP-interacting repress 26.2 1.7E+02 0.0058 22.0 6.4 40 14-53 41-89 (216)
177 2voo_A Lupus LA protein; RNA-b 26.2 88 0.003 23.6 4.5 41 13-53 121-169 (193)
178 1x4a_A Splicing factor, argini 26.1 1.4E+02 0.0048 19.5 5.5 39 14-52 35-79 (109)
179 1wg5_A Heterogeneous nuclear r 25.8 1.1E+02 0.0037 20.0 4.5 41 14-54 28-77 (104)
180 2cpi_A CCR4-NOT transcription 25.7 60 0.002 21.7 3.2 34 20-53 37-82 (111)
181 3pgw_S U1-70K; protein-RNA com 25.4 1E+02 0.0035 27.0 5.4 40 14-53 115-163 (437)
182 3md3_A Nuclear and cytoplasmic 25.3 1.1E+02 0.0037 21.8 4.9 39 14-52 13-59 (166)
183 2err_A Ataxin-2-binding protei 24.7 57 0.002 21.7 3.0 39 14-52 42-87 (109)
184 2adc_A Polypyrimidine tract-bi 24.6 2.1E+02 0.0071 22.0 6.7 38 15-52 49-90 (229)
185 2dnz_A Probable RNA-binding pr 24.6 1.4E+02 0.0047 18.9 6.1 41 13-53 17-66 (95)
186 3n9u_C Cleavage and polyadenyl 24.6 1.6E+02 0.0055 21.2 5.6 40 14-53 68-118 (156)
187 3v4m_A Splicing factor U2AF 65 24.5 1.5E+02 0.0052 19.5 5.0 38 16-53 30-78 (105)
188 1l3k_A Heterogeneous nuclear r 24.4 1.2E+02 0.0041 22.4 5.1 41 14-54 26-75 (196)
189 1x4f_A Matrin 3; structural ge 24.3 51 0.0017 22.4 2.6 38 15-52 40-80 (112)
190 2cpj_A Non-POU domain-containi 24.0 59 0.002 21.0 2.9 40 14-53 28-70 (99)
191 2cpd_A Apobec-1 stimulating pr 23.7 1.5E+02 0.0051 19.0 5.6 40 13-52 27-69 (99)
192 2xs2_A Deleted in azoospermia- 23.5 58 0.002 21.2 2.8 39 14-52 22-68 (102)
193 2kt5_A RNA and export factor-b 23.4 1.4E+02 0.0048 20.2 4.9 39 14-52 48-94 (124)
194 1h2v_Z 20 kDa nuclear CAP bind 23.4 1.4E+02 0.0047 21.3 5.0 40 14-53 52-100 (156)
195 2khc_A Testis-specific RNP-typ 23.1 78 0.0027 21.3 3.4 39 15-53 54-101 (118)
196 1b7f_A Protein (SXL-lethal pro 23.0 1.6E+02 0.0054 21.0 5.4 39 14-52 16-63 (168)
197 1wf1_A RNA-binding protein RAL 22.7 1.1E+02 0.0038 20.1 4.2 40 14-53 41-81 (110)
198 3ctr_A Poly(A)-specific ribonu 22.6 37 0.0013 22.6 1.5 39 15-53 19-58 (101)
199 1x5t_A Splicing factor 3B subu 21.8 91 0.0031 19.8 3.5 40 14-53 18-67 (96)
200 1fxl_A Paraneoplastic encephal 21.5 1.6E+02 0.0055 20.8 5.2 40 14-53 15-63 (167)
201 2f3j_A RNA and export factor b 21.5 1.7E+02 0.0058 21.6 5.3 40 14-53 101-148 (177)
202 4flb_A Regulation of nuclear P 21.4 1.2E+02 0.0042 21.1 4.2 57 248-310 19-75 (132)
203 3ns6_A Eukaryotic translation 21.3 1.7E+02 0.0059 18.8 5.3 38 15-52 26-72 (100)
204 3tyt_A Heterogeneous nuclear r 21.3 1.6E+02 0.0054 22.4 5.2 38 15-52 19-60 (205)
205 2cjk_A Nuclear polyadenylated 21.0 1.3E+02 0.0046 21.4 4.7 40 14-53 100-148 (167)
206 2j76_E EIF-4B, EIF4B, eukaryot 21.0 1.5E+02 0.0051 19.1 4.4 37 15-52 33-79 (100)
207 4f02_A Polyadenylate-binding p 20.6 1.5E+02 0.0052 22.5 5.0 40 14-53 28-76 (213)
No 1
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.4e-60 Score=434.68 Aligned_cols=353 Identities=18% Similarity=0.303 Sum_probs=285.9
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+ ..+++.++.+|+++||+||++++++.++|+|+||+++++|+.++...|.+++......... .+.+++++
T Consensus 18 P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~~~-~g~~l~~~ 95 (507)
T 3pm0_A 18 PLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRVVS-GGRSMAFG 95 (507)
T ss_dssp -----------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHHGG-GGTCSSSS
T ss_pred CeeCchhhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHhhc-CCCceEEC
Confidence 789999999 7899999999999999999999999999999999999999988878888877665544333 34566677
Q ss_pred cCChhHHHHHHHHHhhccchhHhh------hhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccC
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQ------SFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRK 154 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~ 154 (364)
.+|+.|+++|+.+ .+.|+..... .+.+.+.++++.+++.+... ..++.++|+.+.+..+++++++.++||.+
T Consensus 96 ~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~~~vd~~~~~~~~~~dvi~~~~fG~~ 173 (507)
T 3pm0_A 96 HYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRG-SADGAFLDPRPLTVVAVANVMSAVCFGCR 173 (507)
T ss_dssp CSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHT-TGGGCCBCCHHHHHHHHHHHHHHHHTSCC
T ss_pred CCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhh-cccCCCcChHHHHHHHHHHHHHHHHcccc
Confidence 7799999999998 7766543333 38899999999999999865 34567899999999999999999999999
Q ss_pred Cchhhh--------------h------hccccccchhhh----hHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 048805 155 ADEEEK--------------N------IGKSNKFDVLSG----LIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQ 210 (364)
Q Consensus 155 ~~~~~~--------------~------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 210 (364)
+...+. . ...+|++.+++. ..++..+....+.+++.+.++++++.... ...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~--- 248 (507)
T 3pm0_A 174 YSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRP--GAA--- 248 (507)
T ss_dssp CCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCC---
T ss_pred CCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccC---
Confidence 865432 0 112444444432 24566777788888899999888776422 122
Q ss_pred CCcccHHHHHHhhhhcCcc------ccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcC
Q 048805 211 LDKKDFVDILLQLRKDGML------VAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKG 284 (364)
Q Consensus 211 ~~~~~~l~~l~~~~~~~~~------~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~ 284 (364)
..|+++.++........ +..++++++..++..+++||+|||+++++|++++|++||++|+|||+||++++++
T Consensus 249 --~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~ 326 (507)
T 3pm0_A 249 --PRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGR 326 (507)
T ss_dssp --CCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCT
T ss_pred --CccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCC
Confidence 67899999965442211 1258999999999999999999999999999999999999999999999999988
Q ss_pred CCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------
Q 048805 285 KLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT---------- 354 (364)
Q Consensus 285 ~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~---------- 354 (364)
++.++.+++++||||+|||+|+||++|++|..++|.+.+|++++||.|||||.|+++.+++||||++|++
T Consensus 327 ~~~~~~~~l~~lpyl~avi~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl 406 (507)
T 3pm0_A 327 DRLPCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNHDPLKWPNPENFDPARFL 406 (507)
T ss_dssp TSCCCGGGGGGCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBSHHHHSCTTTCSSSSSCCGGGGB
T ss_pred CCCCChhhcccChHHHHHHHHHHhcCCCcccCCCccccCCceEcCEEECCCCEEEeChHHHhCCcccCCCcCccCCCccc
Confidence 8889999999999999999999999999998778999999999999999999999999999999999987
Q ss_pred -----------ccccccccCC
Q 048805 355 -----------SQKISFQTGF 364 (364)
Q Consensus 355 -----------~~f~PFg~G~ 364 (364)
..|+|||.|-
T Consensus 407 ~~~~~~~~~~~~~~~pFg~G~ 427 (507)
T 3pm0_A 407 DKDGLINKDLTSRVMIFSVGK 427 (507)
T ss_dssp CTTSCBCHHHHTTCCSSCCST
T ss_pred CCCCcccCCCcccccCCCCCC
Confidence 1688999983
No 2
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=2e-59 Score=429.75 Aligned_cols=351 Identities=22% Similarity=0.367 Sum_probs=294.0
Q ss_pred CccccchhhcC-CCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLG-TLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++++.. +.++..+.+|+++||+||++++|+.++|+|+||+++++++.++...|++++...........+.++++
T Consensus 17 PliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~~~~~~~~~gl~~ 96 (494)
T 3swz_A 17 PLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAF 96 (494)
T ss_dssp CEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHHHHHTTTTCSSSS
T ss_pred CeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHHhccCCCCeEe
Confidence 79999998843 36789999999999999999999999999999999999999888889988876555444444556777
Q ss_pred ccCChhHHHHHHHHHhhccch--hHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCch
Q 048805 80 ANYGEYWRKVRKICVLELLSL--RRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADE 157 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~ 157 (364)
+.+|+.|+.+|+++ .+.|+. ..+..+.+.+.++++.+++.+... .++++|+...+..+++++++.++||.++..
T Consensus 97 ~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~ 172 (494)
T 3swz_A 97 ADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATH---NGQSIDISFPVFVAVTNVISLICFNTSYKN 172 (494)
T ss_dssp SCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT---TTEEECCHHHHHHHHHHHHHHHHHSCCCCT
T ss_pred CCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHc---CCCcccHHHHHHHHHHHHHHHHHcCCcCCC
Confidence 77799999999998 888763 446788999999999999998764 678899999999999999999999998864
Q ss_pred hhh--------------h------hccccccchhhh-hHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccH
Q 048805 158 EEK--------------N------IGKSNKFDVLSG-LIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDF 216 (364)
Q Consensus 158 ~~~--------------~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 216 (364)
.++ . ...+|++.+++. ..+++++....+.+++..+++++.+.... .. ..|+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-----~~d~ 244 (494)
T 3swz_A 173 GDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKFRS---DS-----ITNM 244 (494)
T ss_dssp TCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCCSHHHHHHHHHHHHHHHHHHHHHHHTTTCCT---TC-----CCSH
T ss_pred CCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cc-----hhHH
Confidence 322 0 013455544432 23555666677777788888777654311 12 5789
Q ss_pred HHHHHhhhhcCc--------cccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCC
Q 048805 217 VDILLQLRKDGM--------LVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNI 288 (364)
Q Consensus 217 l~~l~~~~~~~~--------~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~ 288 (364)
++.|+++..+.. ....++++++..++..+++||+|||+++++|++++|+.||++|+|+|+||+++++.++.+
T Consensus 245 l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~ 324 (494)
T 3swz_A 245 LDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTP 324 (494)
T ss_dssp HHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCC
T ss_pred HHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCC
Confidence 999998754311 123589999999999999999999999999999999999999999999999999988889
Q ss_pred ChhhcccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC--------------
Q 048805 289 NMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-------------- 354 (364)
Q Consensus 289 ~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-------------- 354 (364)
+++++.+||||+|||+|+||++|++|..++|.+.+|++++||.|||||.|+++.+++||||++|++
T Consensus 325 ~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~ 404 (494)
T 3swz_A 325 TISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAG 404 (494)
T ss_dssp CGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSSSEEETTEEECTTCEEEECHHHHHHCTTTSSSTTSCCGGGGBCTTS
T ss_pred CHHHHhcCHHHHHHHHHHHHhcCCcccccceecCCCceECCEEeCCCCEEEEehHHhhCCcccCCCcccCCcccccCCCC
Confidence 999999999999999999999999999888999999999999999999999999999999999977
Q ss_pred -------ccccccccC
Q 048805 355 -------SQKISFQTG 363 (364)
Q Consensus 355 -------~~f~PFg~G 363 (364)
..|+|||.|
T Consensus 405 ~~~~~~~~~~~~Fg~G 420 (494)
T 3swz_A 405 TQLISPSVSYLPFGAG 420 (494)
T ss_dssp SSBCCCCSCCCTTCCG
T ss_pred ccccCCCCcccCCCCC
Confidence 247899998
No 3
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=100.00 E-value=1.3e-58 Score=423.04 Aligned_cols=353 Identities=21% Similarity=0.344 Sum_probs=287.0
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccC--Cccee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYE--CRDIG 78 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 78 (364)
|+|||++++...+++..+.+|+++|||||++++|+.++|+|+||+++++|+.++...|+.++........... +.+++
T Consensus 19 P~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~~~~~~~~~~~~~ 98 (479)
T 3tbg_A 19 PGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQILGFGPRSQGVF 98 (479)
T ss_dssp TTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGGGGTCBTTBCCST
T ss_pred CcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHHHhccCCCCCcee
Confidence 8999999997788999999999999999999999999999999999999999888889888876665544322 34566
Q ss_pred eccCChhHHHHHHHHHhhccchhHhhh--hHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCc
Q 048805 79 FANYGEYWRKVRKICVLELLSLRRVQS--FQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKAD 156 (364)
Q Consensus 79 ~~~~~~~~~~~R~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~ 156 (364)
++.+|+.|+++|+.+ .+.|+...+.. +.+.+......+...+... .+..+|+.+.+..+++++++.++||..+.
T Consensus 99 ~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~fg~~~~ 174 (479)
T 3tbg_A 99 LARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANH---SGRPFRPNGLLDKAVSNVIASLTCGRRFE 174 (479)
T ss_dssp TCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTT---TTCCBCTHHHHHHHHHHHHHHHHHSCCCC
T ss_pred eCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhc---cCCcccHHHHHHHHHHHHHHHhhcCCccc
Confidence 777899999999998 77777665543 4566666666666666543 66789999999999999999999999887
Q ss_pred hhhh----------------------hhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcc
Q 048805 157 EEEK----------------------NIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKK 214 (364)
Q Consensus 157 ~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 214 (364)
..+. .+...++...+.....+.........+.+.+.+....+.... ... ..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~ 247 (479)
T 3tbg_A 175 YDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDP--AQP-----PR 247 (479)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGSHHHHHHHTHHHHHHHHHHHHHHHHHHHHCCT--TSC-----CC
T ss_pred ccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhc--ccc-----cc
Confidence 5432 011233333333444556666677777777777777665432 122 45
Q ss_pred cHHHHHHhhhhc--CccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhh
Q 048805 215 DFVDILLQLRKD--GMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKE 292 (364)
Q Consensus 215 ~~l~~l~~~~~~--~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~ 292 (364)
|+++.+...... ......++++++..++.++++||+|||+++++|++++|++||++|+|||+||+++++.++.++.++
T Consensus 248 d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~~~~~~~~~~~~~ 327 (479)
T 3tbg_A 248 DLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGD 327 (479)
T ss_dssp SHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCHHH
T ss_pred hhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhhhhhHHHHHHHHHHhccCHHHHHHHHHHHHHHHhhccccchhh
Confidence 666655543222 112347999999999999999999999999999999999999999999999999999888899999
Q ss_pred cccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC------------------
Q 048805 293 IEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------------ 354 (364)
Q Consensus 293 l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------------ 354 (364)
+++||||+|||+||||++|++|...+|.+.+|++++||.|||||.|+++.+++||||++|++
T Consensus 328 l~~lpyl~avi~EtlRl~p~~~~~~~~~~~~d~~~~g~~IP~Gt~V~~~~~~~h~d~~~~~dP~~F~PeRfl~~~~~~~~ 407 (479)
T 3tbg_A 328 QAHMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFRFHPEHFLDAQGHFVK 407 (479)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGBCTTCCBCC
T ss_pred hccccccccceeeeccccccccccceeecCCCceECCEEecCCCeeeechhhhcCChhhCCCccccCccccCCCCcccCC
Confidence 99999999999999999999999987778899999999999999999999999999999987
Q ss_pred -ccccccccCC
Q 048805 355 -SQKISFQTGF 364 (364)
Q Consensus 355 -~~f~PFg~G~ 364 (364)
..|+|||.|-
T Consensus 408 ~~~~~pFG~G~ 418 (479)
T 3tbg_A 408 PEAFLPFSAGR 418 (479)
T ss_dssp CTTCCTTCCST
T ss_pred CCceecCCCCC
Confidence 4689999993
No 4
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=2e-58 Score=421.50 Aligned_cols=348 Identities=22% Similarity=0.296 Sum_probs=288.0
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++++...+++.++.+|+++||+||++++++.++|+|+||+.+++|+.++...|++++......... +.+ ++.
T Consensus 19 PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~~~~--~~~-l~~ 95 (476)
T 3e6i_A 19 PIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFHAHR--DRG-IIF 95 (476)
T ss_dssp TTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGGGGT--TSS-STT
T ss_pred ccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhheec--CCC-EEe
Confidence 89999999866789999999999999999999999999999999999999998777787776654443332 224 455
Q ss_pred cCChhHHHHHHHHHhhccchhHh--hhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh
Q 048805 81 NYGEYWRKVRKICVLELLSLRRV--QSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE 158 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~ 158 (364)
.+|+.|+++|+++ .+.+....+ ..+.+.+.+.++.+++.+... .++++|+.+.+..+++++++.++||.+++..
T Consensus 96 ~~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~~d~~~~~~~~~~dvi~~~~fG~~~~~~ 171 (476)
T 3e6i_A 96 NNGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKT---QGQPFDPTFLIGCAPCNVIADILFRKHFDYN 171 (476)
T ss_dssp CCSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTT---TTSCBCTHHHHTHHHHHHHHHHHHSCCCCTT
T ss_pred cCCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHh---CCCCcChHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 5699999999987 666655433 346788999999999999764 5678999999999999999999999988754
Q ss_pred hhh-----------hc-----------ccc-ccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccc
Q 048805 159 EKN-----------IG-----------KSN-KFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKD 215 (364)
Q Consensus 159 ~~~-----------~~-----------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 215 (364)
+.. +. .+| ++.+++...++..+....+.+++.+.++++++.... .. ..|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-----~~d 243 (476)
T 3e6i_A 172 DEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLPGSHRKVIKNVAEVKEYVSERVKEHHQSLDP---NC-----PRD 243 (476)
T ss_dssp CHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHHTCCT---TS-----CCS
T ss_pred CHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---CC-----Ccc
Confidence 320 00 111 223333344566677788888999999888765422 22 568
Q ss_pred HHHHHHhhhhcCc--cccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhc
Q 048805 216 FVDILLQLRKDGM--LVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEI 293 (364)
Q Consensus 216 ~l~~l~~~~~~~~--~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l 293 (364)
+++.++.....+. .+..++++++..++..+++||+|||+++++|++++|++||++|+|||+||+++++.+..++++++
T Consensus 244 ~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~ 323 (476)
T 3e6i_A 244 LTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDR 323 (476)
T ss_dssp HHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTTSCCCGGGG
T ss_pred HHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCCCChhhc
Confidence 9999987654431 12358999999999999999999999999999999999999999999999999988788999999
Q ss_pred ccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-------------------
Q 048805 294 EKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------------- 354 (364)
Q Consensus 294 ~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------------- 354 (364)
++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|++
T Consensus 324 ~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeR~l~~~~~~~~~ 403 (476)
T 3e6i_A 324 QEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYS 403 (476)
T ss_dssp GGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSSBCCC
T ss_pred cCCchHHHHHHHHHHhccCCCccccccCCCCeeEcCEEeCCCCEEEechHHhhCCcccCCCccccCchhhcCCCCCccCc
Confidence 9999999999999999999998777999999999999999999999999999999999987
Q ss_pred ccccccccC
Q 048805 355 SQKISFQTG 363 (364)
Q Consensus 355 ~~f~PFg~G 363 (364)
..|+|||.|
T Consensus 404 ~~~~pFg~G 412 (476)
T 3e6i_A 404 DYFKPFSTG 412 (476)
T ss_dssp TTCCTTCCS
T ss_pred cceecCCCC
Confidence 347789998
No 5
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=100.00 E-value=2.8e-58 Score=421.42 Aligned_cols=347 Identities=18% Similarity=0.249 Sum_probs=275.5
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhC-CccccCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTH-DIVTSNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.+|+++||+||++++++.++|+|+||+.+++|+.++ ...|.+++....... .+ ..++
T Consensus 23 PliGn~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~---~~-~~l~ 97 (485)
T 3nxu_A 23 PFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF---MK-SAIS 97 (485)
T ss_dssp TTTBTGGGG-GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG---GG-GSTT
T ss_pred CeecCcHHh-hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc---cc-cCcc
Confidence 899999999 77899999999999999999999999999999999999999876 456666654433221 12 2345
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhh
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEE 159 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~ 159 (364)
..+|+.|+++|+.+ .+.|+.++++.+.+.+.+.++.+++.+... ...++++|+.+.+..+++++++.++||.+++..+
T Consensus 98 ~~~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~g~~~d~~~~~~~~~~dvi~~~~fG~~~~~~~ 175 (485)
T 3nxu_A 98 IAEDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRRE-AETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLN 175 (485)
T ss_dssp TCCHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTCCEEHHHHHHHHHHHHHHHHHHSCCCCGGG
T ss_pred ccCCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHH-hccCCcCcHHHHHHHHHHHHHHHHHcCCcccccc
Confidence 56799999999998 999999999999999999999999999764 3456789999999999999999999999987532
Q ss_pred h----h-------hc------------cccccchhhhhHH---HHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCc
Q 048805 160 K----N-------IG------------KSNKFDVLSGLIG---RLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDK 213 (364)
Q Consensus 160 ~----~-------~~------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 213 (364)
. . +. .++++.++..... ........+.+.+.+.++.+.+. .... .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~ 246 (485)
T 3nxu_A 176 NPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED----TQKH-----R 246 (485)
T ss_dssp CTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHC----C--------C
T ss_pred CCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc----cCCC-----c
Confidence 1 0 00 1111111100000 00122233334444444433221 1122 6
Q ss_pred ccHHHHHHhhhhcCc--cccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChh
Q 048805 214 KDFVDILLQLRKDGM--LVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMK 291 (364)
Q Consensus 214 ~~~l~~l~~~~~~~~--~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 291 (364)
.|+++.|++...... ....++++++..++..+++||+|||+++++|++++|++||++|+||++|+++++++++.++++
T Consensus 247 ~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~ 326 (485)
T 3nxu_A 247 VDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYD 326 (485)
T ss_dssp CCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTTCCCCHH
T ss_pred ccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCCHH
Confidence 789999998754321 124689999999999999999999999999999999999999999999999999988889999
Q ss_pred hcccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------------
Q 048805 292 EIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------------- 354 (364)
Q Consensus 292 ~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------------- 354 (364)
++.+||||+|||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|++
T Consensus 327 ~~~~lpyl~a~i~E~lRl~p~~~~-~~R~~~~d~~i~g~~Ip~Gt~V~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~ 405 (485)
T 3nxu_A 327 TVLQMEYLDMVVNETLRLFPIAMR-LERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNI 405 (485)
T ss_dssp HHHHCHHHHHHHHHHHHHSCSCSC-EEEECCSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGSHHHHTTS
T ss_pred HHhcChHHHHHHHHHHhcCCCccC-cceeeCCCeeECCEEECCCCEEEEchHHhcCChhhcCCccCcCccccCCCccccC
Confidence 999999999999999999999997 66999999999999999999999999999999999987
Q ss_pred --ccccccccCC
Q 048805 355 --SQKISFQTGF 364 (364)
Q Consensus 355 --~~f~PFg~G~ 364 (364)
..|+|||.|-
T Consensus 406 ~~~~~~pFg~G~ 417 (485)
T 3nxu_A 406 DPYIYTPFGSGP 417 (485)
T ss_dssp CTTTCCTTCCST
T ss_pred CCCCccCCCCCC
Confidence 2478999983
No 6
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=100.00 E-value=4.2e-59 Score=423.82 Aligned_cols=341 Identities=16% Similarity=0.235 Sum_probs=287.3
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|+|||++++ .++++.++.+|++||||||+++++|.++|+|+||+.+++++.++...+.+++........ ..|.+++++
T Consensus 21 P~iG~~~~~-~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~~-~~g~~~~~~ 98 (461)
T 3ld6_A 21 PFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTP-VFGKGVAYD 98 (461)
T ss_dssp TTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHHH-HHCTTSGGG
T ss_pred CeeeeHHHh-hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhhc-cCCCccccC
Confidence 799999999 889999999999999999999999999999999999999998877777655443222221 125677788
Q ss_pred cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhh
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEK 160 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~ 160 (364)
.+|+.|+++|+.+ .+.|+...++.+.+.+.+.++++++.+.+ +..+|+.+.+..+++++++.++||.++.....
T Consensus 99 ~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~fG~~~~~~~~ 172 (461)
T 3ld6_A 99 VPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGE-----SGEKNVFEALSELIILTASHCLHGKEIRSQLN 172 (461)
T ss_dssp SCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCS-----EEEEEHHHHHHHHHHHHHHHHHTCHHHHHTCC
T ss_pred CCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhh-----cCCccHHHHHHHHHHHHHHHHHcCcchhhhhh
Confidence 8899999999998 99999999999999999999999887754 36789999999999999999999987654311
Q ss_pred ------------hhc----cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhh
Q 048805 161 ------------NIG----KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLR 224 (364)
Q Consensus 161 ------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 224 (364)
.+. .++.+... ....+..++.+.+.+++.+.+++++... +. .+|+++.|+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~r~~~~-----~~-----~~d~l~~ll~~~ 241 (461)
T 3ld6_A 173 EKVAQLYADLDGGFSHAAWLLPGWLPL-PSFRRRDRAHREIKDIFYKAIQKRRQSQ-----EK-----IDDILQTLLDAT 241 (461)
T ss_dssp HHHHHHHHHHHTTSSHHHHHSCTTSCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCC-----CC-----CCSHHHHHHTCB
T ss_pred hhhhhhhhhhhhhhhhHHHhhhhhccC-cHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CC-----CcchhhhhHHhh
Confidence 000 11111111 2345566777788888888888776442 22 678999999876
Q ss_pred hcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCC-CCCChhhcccchhHHHHH
Q 048805 225 KDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGK-LNINMKEIEKMEYLKCVV 303 (364)
Q Consensus 225 ~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~l~~L~a~i 303 (364)
.+++ ..+++++++.++..+++||+|||+++++|++++|+.||++|+|+|+|+++++++. ..++.+++++||||+|||
T Consensus 242 ~~~~--~~ls~~ei~~~~~~~~~aG~dTt~~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~~~~~~l~~lpyl~avi 319 (461)
T 3ld6_A 242 YKDG--RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCI 319 (461)
T ss_dssp CTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHHH
T ss_pred hccc--CCCCHHHHHHHHHhhhhcccccccccchhhhcccccChHHHHHHHHHHHHHhcccccchhHHHHHHHhhhhhee
Confidence 6543 4799999999999999999999999999999999999999999999999999865 457899999999999999
Q ss_pred hhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-------------------ccccccccC
Q 048805 304 KETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-------------------SQKISFQTG 363 (364)
Q Consensus 304 ~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-------------------~~f~PFg~G 363 (364)
+|+||++|+++... |.+.+|++++||.|||||.|+++.+++||||++|++ ..|+|||.|
T Consensus 320 ~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dP~~F~PeRfl~~~~~~~~~~~~~pFG~G 397 (461)
T 3ld6_A 320 KETLRLRPPIMIMM-RMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAG 397 (461)
T ss_dssp HHHHHHSCSCCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCGGGGGSCCHHHHSSSSSCTTCCG
T ss_pred eeccccCCchhccc-cccccceeeCCcccCCCCeeeechHhhcCCccccCCccccCccccCCCCcccCCCCccccCCCc
Confidence 99999999999865 999999999999999999999999999999999987 358999998
No 7
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=5.1e-58 Score=418.37 Aligned_cols=350 Identities=21% Similarity=0.311 Sum_probs=285.8
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+...+++.++.+|+++||+||++++++.++|+++||+.+++|+.++...|++++......... .+.++++
T Consensus 19 p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~-~~~~l~~- 96 (476)
T 2fdv_A 19 PFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDWVF-KGYGVVF- 96 (476)
T ss_dssp TTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHHHH-TTCSSSS-
T ss_pred cccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhhhc-CCCCeEe-
Confidence 78999998855788999999999999999999999999999999999999976666677655432222221 2344444
Q ss_pred cCChhHHHHHHHHHhhccchhHh--hhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh
Q 048805 81 NYGEYWRKVRKICVLELLSLRRV--QSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE 158 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~ 158 (364)
.+|+.|+++|+.+ .+.|+...+ +.+.+.+.+.++.+++.+... .++++|+.+.+..+++++++.++||.+++..
T Consensus 97 ~~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~ 172 (476)
T 2fdv_A 97 SNGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGT---GGANIDPTFFLSRTVSNVISSIVFGDRFDYK 172 (476)
T ss_dssp CCHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHT---TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred cCchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhc---CCCccChHHHHHHHHHHHHHHHHcCCcCCCC
Confidence 4699999999998 899987766 779999999999999999754 4578999999999999999999999987632
Q ss_pred hh-----------hh---c--------cccc-cchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccc
Q 048805 159 EK-----------NI---G--------KSNK-FDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKD 215 (364)
Q Consensus 159 ~~-----------~~---~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 215 (364)
+. .+ . .+|+ +.+++...++..+....+.+++.++++++++.... .. ..|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d 244 (476)
T 2fdv_A 173 DKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLDP---NS-----PRD 244 (476)
T ss_dssp CHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCT---TS-----CCS
T ss_pred CHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CC-----Ccc
Confidence 21 00 0 1111 11122223455667778888888888887754311 12 579
Q ss_pred HHHHHHhhhhcC--ccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhc
Q 048805 216 FVDILLQLRKDG--MLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEI 293 (364)
Q Consensus 216 ~l~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l 293 (364)
+++.|+...... ..+..++++++.+++..+++||+|||+++++|++++|++||++|+|||+||++++++++.++++++
T Consensus 245 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~ 324 (476)
T 2fdv_A 245 FIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDR 324 (476)
T ss_dssp HHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGG
T ss_pred HHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhhcCCCCCChhhh
Confidence 999999765321 112368999999999999999999999999999999999999999999999999988777999999
Q ss_pred ccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC------------c------
Q 048805 294 EKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------S------ 355 (364)
Q Consensus 294 ~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------~------ 355 (364)
++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|.++.+++||||++|++ +
T Consensus 325 ~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dp~~F~PeR~l~~~~~~~~~ 404 (476)
T 2fdv_A 325 AKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFKKS 404 (476)
T ss_dssp GGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCBCCC
T ss_pred hcChHHHHHHHHHHHhcCCcccCcceeccCCeeECCEeeCCCCEEEeehHHhhCChhhcCCccccCchhhCCCCCCCCCC
Confidence 9999999999999999999997677999999999999999999999999999999999987 1
Q ss_pred -cccccccCC
Q 048805 356 -QKISFQTGF 364 (364)
Q Consensus 356 -~f~PFg~G~ 364 (364)
.|+|||.|-
T Consensus 405 ~~~lpFG~G~ 414 (476)
T 2fdv_A 405 DAFVPFSIGK 414 (476)
T ss_dssp TTCCTTCCST
T ss_pred cCcccCCCCC
Confidence 589999983
No 8
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=4e-58 Score=419.08 Aligned_cols=350 Identities=23% Similarity=0.381 Sum_probs=283.2
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+..++++.++.+|+++||+||++++++.++|+++||+.+++|+.++...|.+++......... .+.++ +.
T Consensus 19 p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~~~-~~~~l-~~ 96 (476)
T 1po5_A 19 PVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDPIF-QGYGV-IF 96 (476)
T ss_dssp TTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCSCC-SSCCC-CC
T ss_pred CccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHhhc-CCCce-Ee
Confidence 78999998855788999999999999999999999899999999999999976666777655432222211 23444 44
Q ss_pred cCChhHHHHHHHHHhhccchh--HhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh
Q 048805 81 NYGEYWRKVRKICVLELLSLR--RVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE 158 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~ 158 (364)
.+|+.|+++|+++ .+.|+.. .++.+.+.+.++++.+++.+... .++++|+.+.+..+++++++.++||.+++..
T Consensus 97 ~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~ 172 (476)
T 1po5_A 97 ANGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKS---KGALLDNTLLFHSITSNIICSIVFGKRFDYK 172 (476)
T ss_dssp SSHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---TTCCBCCHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred cCCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhc---CCCccCHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 4799999999997 8888776 45678999999999999999764 4578999999999999999999999987632
Q ss_pred hh-----------hhc-----------cccc-cchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccc
Q 048805 159 EK-----------NIG-----------KSNK-FDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKD 215 (364)
Q Consensus 159 ~~-----------~~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 215 (364)
+. .+. .+|+ +.+++...++..+....+.+++.+.++++++.... .. ..|
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d 244 (476)
T 1po5_A 173 DPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDP---SN-----PRD 244 (476)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHHHHHHHHHTTCCT---TS-----CCS
T ss_pred CHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CC-----ccc
Confidence 21 010 0111 11112223455667778888889999887764311 11 468
Q ss_pred HHHHHHhhhhc--CccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhc
Q 048805 216 FVDILLQLRKD--GMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEI 293 (364)
Q Consensus 216 ~l~~l~~~~~~--~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l 293 (364)
+++.|+..... +..+..++++++.+++.++++||+|||+++++|++++|++||++|+|||+||++++++++.++.+++
T Consensus 245 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l 324 (476)
T 1po5_A 245 FIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDR 324 (476)
T ss_dssp HHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGG
T ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCChHHH
Confidence 99999865432 1112358999999999999999999999999999999999999999999999999987777999999
Q ss_pred ccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC------------c------
Q 048805 294 EKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------S------ 355 (364)
Q Consensus 294 ~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------~------ 355 (364)
++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|++ +
T Consensus 325 ~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rdp~~~~dp~~F~PeR~l~~~~~~~~~ 404 (476)
T 1po5_A 325 AKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRN 404 (476)
T ss_dssp GGCHHHHHHHHHHHHHHCSSTTCCCEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCSSTTSCCGGGGBCTTSCBCCC
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCccccCCCceecCEecCCCCEEEeehHhHhcCccccCCccccCchhhCCCCCCccCC
Confidence 9999999999999999999997677999999999999999999999999999999999987 1
Q ss_pred -cccccccCC
Q 048805 356 -QKISFQTGF 364 (364)
Q Consensus 356 -~f~PFg~G~ 364 (364)
.|+|||.|-
T Consensus 405 ~~~lpFG~G~ 414 (476)
T 1po5_A 405 EGFMPFSLGK 414 (476)
T ss_dssp TTCCTTCCST
T ss_pred ccccCCCCcc
Confidence 589999983
No 9
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=1e-57 Score=416.65 Aligned_cols=350 Identities=22% Similarity=0.332 Sum_probs=286.2
Q ss_pred CccccchhhcCCC--CchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCccee
Q 048805 1 SHTWQLHQLLGTL--PHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIG 78 (364)
Q Consensus 1 p~lG~~~~~~~~~--~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (364)
|++||++.+.... ++..+.+|+++||+||++++++.++|+|+||+.+++|+.++...|++++.......+. .+.+++
T Consensus 21 p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~~~~~~-~~~~~~ 99 (481)
T 3czh_A 21 PFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPLFMKMT-KMGGLL 99 (481)
T ss_dssp TTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHHHHHHH-TTCSST
T ss_pred cccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHHHHhhc-CCCCeE
Confidence 7899999884333 8899999999999999999999999999999999999987766787776443222221 123445
Q ss_pred eccCChhHHHHHHHHHhhccchhHh--hhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCc
Q 048805 79 FANYGEYWRKVRKICVLELLSLRRV--QSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKAD 156 (364)
Q Consensus 79 ~~~~~~~~~~~R~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~ 156 (364)
+..+|+.|+++|+++ .+.|+...+ ..+.+.+.+.++.+++.+... .++++|+.+.+..+++++++.++||.++.
T Consensus 100 ~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 175 (481)
T 3czh_A 100 NSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETY---KGRPFDFKQLITNAVSNITNLIIFGERFT 175 (481)
T ss_dssp TCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTT---TTCCBCCHHHHHHHHHHHHHHHHHSSCCC
T ss_pred eCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc---CCCCcCHHHHHHHHHHHHHHHHHcCCCCC
Confidence 567799999999998 888876544 578999999999999999764 45689999999999999999999999875
Q ss_pred hhhh-----------hh---c--------cccccchhh-hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCc
Q 048805 157 EEEK-----------NI---G--------KSNKFDVLS-GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDK 213 (364)
Q Consensus 157 ~~~~-----------~~---~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 213 (364)
..+. .+ . .+|++.+++ ...++..+....+.+++.++++++++.... .. .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~ 247 (481)
T 3czh_A 176 YEDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKP---QL-----P 247 (481)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCT---TC-----C
T ss_pred CCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---Cc-----h
Confidence 3221 00 0 123332222 233556677778888999999888764311 12 5
Q ss_pred ccHHHHHHhhhhcCc--cccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChh
Q 048805 214 KDFVDILLQLRKDGM--LVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMK 291 (364)
Q Consensus 214 ~~~l~~l~~~~~~~~--~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~ 291 (364)
.|+++.|++...... .+..++++++..++.++++||+|||+++++|++++|++||++|+|||+|++++++.++.++++
T Consensus 248 ~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~ 327 (481)
T 3czh_A 248 QHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGKPSWD 327 (481)
T ss_dssp SSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGG
T ss_pred HHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhccchHHHHHHHHHHHHhhChHHHHHHHHHHHHhcCCCCCCChh
Confidence 789999997654311 123689999999999999999999999999999999999999999999999999887789999
Q ss_pred hcccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------------
Q 048805 292 EIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------------- 354 (364)
Q Consensus 292 ~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------------- 354 (364)
++++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|++
T Consensus 328 ~~~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~ 407 (481)
T 3czh_A 328 DKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFA 407 (481)
T ss_dssp GGGGCHHHHHHHHHHHHHHCSSTTCSCEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTCSSTTSCCGGGGBCTTSCBC
T ss_pred hhhhChHHHHHHHHHHhhccccccCcceeecCCeEEeCEEcCCCCEEEechHHHhCCcccCCCccccCCCceeCCCCCCc
Confidence 999999999999999999999997777999999999999999999999999999999999987
Q ss_pred --ccccccccC
Q 048805 355 --SQKISFQTG 363 (364)
Q Consensus 355 --~~f~PFg~G 363 (364)
..|+|||.|
T Consensus 408 ~~~~~lpFG~G 418 (481)
T 3czh_A 408 KKEALVPFSLG 418 (481)
T ss_dssp CCTTCCTTCCS
T ss_pred CCcceeCCCCC
Confidence 137999998
No 10
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-57 Score=417.37 Aligned_cols=342 Identities=19% Similarity=0.341 Sum_probs=278.8
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+ .++++.++.+|+++||+||++++++.++|+++||+.+++|+.++...|.+++........ ..+.+++++
T Consensus 25 p~~G~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~~-~~~~~l~~~ 102 (495)
T 2hi4_A 25 PLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTLI-TDGQSLTFS 102 (495)
T ss_dssp TTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHTS-TTSCCTTTS
T ss_pred cceeeHHhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHHh-cCCCCEEEc
Confidence 789999988 778999999999999999999999999999999999999998776678777654322222 123455555
Q ss_pred -cCChhHHHHHHHHHhhccch---hHh---h---hhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHh
Q 048805 81 -NYGEYWRKVRKICVLELLSL---RRV---Q---SFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCV 150 (364)
Q Consensus 81 -~~~~~~~~~R~~~~~~~~~~---~~l---~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~ 150 (364)
.+|+.|+++|+++ .+.|+. ..+ + .+.+.+.+.++.+++.+... ..+++++|+.+.+..+++++++.++
T Consensus 103 ~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~-~~~~~~~d~~~~~~~~~~dvi~~~~ 180 (495)
T 2hi4_A 103 TDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQEL-MAGPGHFDPYNQVVVSVANVIGAMC 180 (495)
T ss_dssp SCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHH-HHTTSCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHh-ccCCCccchHHHHHHHHHHHHHHHH
Confidence 4699999999998 777543 222 2 68899999999999999764 2356789999999999999999999
Q ss_pred hccCCchhhh-----------hh---------ccccccchhh-hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 048805 151 LGRKADEEEK-----------NI---------GKSNKFDVLS-GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDN 209 (364)
Q Consensus 151 fG~~~~~~~~-----------~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 209 (364)
||.+++..+. .. ..+|++.+++ ...++..+....+.+++.++++++++.... ..
T Consensus 181 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-- 255 (495)
T 2hi4_A 181 FGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFLWFLQKTVQEHYQDFDK---NS-- 255 (495)
T ss_dssp HGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCT---TC--
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cc--
Confidence 9997753221 00 1233333332 234556677788889999999888765311 12
Q ss_pred CCCcccHHHHHHhhhhcC--ccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCC
Q 048805 210 QLDKKDFVDILLQLRKDG--MLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLN 287 (364)
Q Consensus 210 ~~~~~~~l~~l~~~~~~~--~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~ 287 (364)
..|+++.|++..... ..+..++++++..++.++++||+|||+++++|++++|++||++|+|+++||+++++.++.
T Consensus 256 ---~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~ 332 (495)
T 2hi4_A 256 ---VRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERR 332 (495)
T ss_dssp ---CCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTTTSSC
T ss_pred ---cccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCCCC
Confidence 578999999653221 112368999999999999999999999999999999999999999999999999988778
Q ss_pred CChhhcccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC
Q 048805 288 INMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT 354 (364)
Q Consensus 288 ~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~ 354 (364)
++.+++++||||+|||+|+||++|++|..++|.+.+|++++||.|||||.|.++.+++||||++|++
T Consensus 333 ~~~~~~~~lpyl~avi~E~lRl~p~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~d 399 (495)
T 2hi4_A 333 PRLSDRPQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWED 399 (495)
T ss_dssp CCGGGSTTCHHHHHHHHHHHHHHCSSCBCSCEECSSCEEETTEEECTTCEEEEBHHHHHHCTTTCSS
T ss_pred CChHHhccCHHHHHHHHHHHHccCCccCCCccccCCCeeEeCeEECCCCEEEeChHHhhCCcccCCC
Confidence 9999999999999999999999999998777999999999999999999999999999999999987
No 11
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=8.6e-58 Score=417.07 Aligned_cols=349 Identities=23% Similarity=0.344 Sum_probs=278.3
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+...+++.++.+|+++||+||++++++.++|+++||+.+++|+.++...|.+++......... .+.++ +.
T Consensus 20 p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~~~-~~~~l-~~ 97 (477)
T 1r9o_A 20 PVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAERAN-RGFGI-VF 97 (477)
T ss_dssp C-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCTTT-CTTSS-TT
T ss_pred ceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhhcc-CCCce-Ee
Confidence 78999988744678999999999999999999998899999999999999976666677655432222211 23444 44
Q ss_pred cCChhHHHHHHHHHhhccchh--HhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh
Q 048805 81 NYGEYWRKVRKICVLELLSLR--RVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE 158 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~ 158 (364)
.+|+.|+++|+.+ .+.|+.. .++.+.+.+.++++.+++.+... .++++|+.+.+..+++++++.++||.+++..
T Consensus 98 ~~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~ 173 (477)
T 1r9o_A 98 SNGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKT---KASPCDPTFILGCAPCNVICSIIFHKRFDYK 173 (477)
T ss_dssp CCHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTT---TTSCBCTHHHHHHHHHHHHHHHHHSCCCCTT
T ss_pred cCChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc---CCCccChHHHHHHHHHHHHHHHHccCcCCCC
Confidence 5799999999997 8888776 44678999999999999999754 4578999999999999999999999887533
Q ss_pred hh-----------hh---c--------cccc-cchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCccc
Q 048805 159 EK-----------NI---G--------KSNK-FDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKD 215 (364)
Q Consensus 159 ~~-----------~~---~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 215 (364)
+. .+ . .+|+ +.+++...++..+....+.+++.++++++++.... .. ..|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d 245 (477)
T 1r9o_A 174 DQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDM---NN-----PQD 245 (477)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCT---TC-----CCS
T ss_pred CHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHhccCC---CC-----chH
Confidence 21 11 0 1122 12222223556677778889999999888765311 11 568
Q ss_pred HHHHHHhhhhc--CccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhc
Q 048805 216 FVDILLQLRKD--GMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEI 293 (364)
Q Consensus 216 ~l~~l~~~~~~--~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l 293 (364)
+++.|+..... +..+..++++++.+++.++++||+|||+++++|++++|++||++|+||++||++++++++.++.+++
T Consensus 246 ~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~~ 325 (477)
T 1r9o_A 246 FIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDR 325 (477)
T ss_dssp HHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTCSSSCCCGGGG
T ss_pred HHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHhcCCCCCCChHhh
Confidence 99999865332 1112368999999999999999999999999999999999999999999999999987777999999
Q ss_pred ccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC------------c------
Q 048805 294 EKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------S------ 355 (364)
Q Consensus 294 ~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------~------ 355 (364)
++||||+|||+|+||++|+++..++|.+.+|++++||.|||||.|+++.+++||||++|++ +
T Consensus 326 ~~lpyl~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~l~~~~~~~~~ 405 (477)
T 1r9o_A 326 SHMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKS 405 (477)
T ss_dssp GGCHHHHHHHHHHHHHHTSSTTCSCEECSSCEEETTEEECTTCEEEECSHHHHTCTTTSSSTTSCCGGGGBCTTSCBCCC
T ss_pred ccCcHHHHHHHHHHHhcCCCCCCCceeccCCccccceecCCCCEEEEecHHhhCCcccCCCccccCccceECCCCCcCcc
Confidence 9999999999999999999997677999999999999999999999999999999999987 1
Q ss_pred -cccccccC
Q 048805 356 -QKISFQTG 363 (364)
Q Consensus 356 -~f~PFg~G 363 (364)
.|+|||.|
T Consensus 406 ~~~~pFG~G 414 (477)
T 1r9o_A 406 KYFMPFSAG 414 (477)
T ss_dssp TTCCTTCCG
T ss_pred ccccCCCCc
Confidence 68999998
No 12
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=100.00 E-value=8.6e-57 Score=411.37 Aligned_cols=345 Identities=18% Similarity=0.279 Sum_probs=279.4
Q ss_pred Cccccchhhc----CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcc---hhcccC
Q 048805 1 SHTWQLHQLL----GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPA---NILLYE 73 (364)
Q Consensus 1 p~lG~~~~~~----~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~---~~~~~~ 73 (364)
|++||++.+. .++++.++.+|+++||+||++++|+.++|+++||+.+++|+.++ ..|.+++....+ ......
T Consensus 33 p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~~~~~~~~~~~~~~ 111 (482)
T 3k9v_A 33 PLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLEIKPWKAYRDHRNE 111 (482)
T ss_dssp TTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCCCHHHHHHHHHHTC
T ss_pred CccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCCchHHHHHHHhcCC
Confidence 7899999885 24678999999999999999999999999999999999999864 567766653322 111112
Q ss_pred CcceeeccCChhHHHHHHHHHhhc-cchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhc
Q 048805 74 CRDIGFANYGEYWRKVRKICVLEL-LSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLG 152 (364)
Q Consensus 74 ~~~~~~~~~~~~~~~~R~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG 152 (364)
+.+ ++..+|+.|+++||.+ .+. ++...++.+.+.+.+.++.+++.+.....+.++++|+.+.+..+++++++.++||
T Consensus 112 ~~~-l~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~~~~~~~t~dvi~~~~fG 189 (482)
T 3k9v_A 112 AYG-LMILEGQEWQRVRSAF-QKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLYSELNKWSFESICLVLYE 189 (482)
T ss_dssp CCC-TTTCCHHHHHHHHHHH-HHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHHHHHHHHHHHHHHHHHHS
T ss_pred CCC-ceeCCCchHHHHHHHh-hHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHcc
Confidence 333 4556699999999998 665 5888899999999999999999998753335678999999999999999999999
Q ss_pred cCCchhh--------h-------hhc------ccc--ccchhh-hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 048805 153 RKADEEE--------K-------NIG------KSN--KFDVLS-GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDD 208 (364)
Q Consensus 153 ~~~~~~~--------~-------~~~------~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 208 (364)
.++...+ . .+. ..+ +..+++ ...++..+..+.+.+++.++++++++.... ..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~- 265 (482)
T 3k9v_A 190 KRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKPCIDNRLQRYSQ---QP- 265 (482)
T ss_dssp CCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---CT-
T ss_pred cccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CC-
Confidence 9884221 0 000 111 111111 122344556667777888888887765421 12
Q ss_pred CCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCC
Q 048805 209 NQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNI 288 (364)
Q Consensus 209 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~ 288 (364)
..|++..++.. ..++++++.+++.++++||+|||+++++|++++|++||++|+|+++||++++++++.+
T Consensus 266 ----~~d~l~~ll~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~q~kl~~Ei~~v~~~~~~~ 334 (482)
T 3k9v_A 266 ----GADFLCDIYQQ-------DHLSKKELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP 334 (482)
T ss_dssp ----TSCHHHHHHHH-------TCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCTTCCC
T ss_pred ----chHHHHHHHhc-------cCCCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCC
Confidence 45788777754 2589999999999999999999999999999999999999999999999999988889
Q ss_pred ChhhcccchhHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC--------------
Q 048805 289 NMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-------------- 354 (364)
Q Consensus 289 ~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-------------- 354 (364)
+.+++++||||+|||+|+||++|++|. .+|.+.+|++++||.|||||.|+++.+++||||++|++
T Consensus 335 ~~~~l~~lpyl~avi~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~~p~~F~PeRfl~~~~ 413 (482)
T 3k9v_A 335 RAEDLRNMPYLKACLKESMRLTPSVPF-TTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQKEK 413 (482)
T ss_dssp CGGGGGGCHHHHHHHHHHHHHSCSCCE-EEEECSSCEEETTEEECTTCEEEEECSGGGGCTTTCSSTTSCCGGGGTCTTS
T ss_pred CHHHHhhCHHHHHHHHHHhhcCCCCcC-cccccCCceeeCCEEECCCCEEEEccccccCCCccCCCcCccCccccCCCCC
Confidence 999999999999999999999999998 56999999999999999999999999999999999987
Q ss_pred ----ccccccccCC
Q 048805 355 ----SQKISFQTGF 364 (364)
Q Consensus 355 ----~~f~PFg~G~ 364 (364)
..|+|||.|-
T Consensus 414 ~~~~~~~~pFg~G~ 427 (482)
T 3k9v_A 414 KINPFAHLPFGIGK 427 (482)
T ss_dssp CCCGGGCCTTCCST
T ss_pred CCCCccccCCCCCC
Confidence 2578999983
No 13
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=4.9e-57 Score=414.33 Aligned_cols=345 Identities=21% Similarity=0.346 Sum_probs=283.4
Q ss_pred chhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChh
Q 048805 6 LHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEY 85 (364)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (364)
++++..++++..+.+|+++||+||++++++.++|+|+||+.+++|+.++...|++++..........+..+++++.+|+.
T Consensus 37 l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~l~~~~~g~~ 116 (496)
T 3qz1_A 37 FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSYKLVSQRCQDISLGDYSLL 116 (496)
T ss_dssp SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTTTTSCTTCCCSSSSCCSHH
T ss_pred ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchHHHhcCCCCceEECCCCHH
Confidence 34454688999999999999999999999999999999999999998887788888766544433322225555555999
Q ss_pred HHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhh-----
Q 048805 86 WRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEK----- 160 (364)
Q Consensus 86 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~----- 160 (364)
|+++||.+ .+.|+...++.+.+.+.++++.+++.+... .++++|+.+.+..+++++++.++||...+....
T Consensus 117 w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~ 192 (496)
T 3qz1_A 117 WKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQ---AGAPVTIQKEFSLLTCSIICYLTFGNKEDTLVHAFHDC 192 (496)
T ss_dssp HHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTT---CSCCCHHHHHHTHHHHHHTTTTSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhc---CCCccCHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHH
Confidence 99999998 888887777889999999999999999763 677899999999999999999999992211110
Q ss_pred ---h-----------hccccccchhh-hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhh
Q 048805 161 ---N-----------IGKSNKFDVLS-GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRK 225 (364)
Q Consensus 161 ---~-----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 225 (364)
. ...+|++.+++ ...++..+....+.+++.+.++++++.... .. ..|+++.|++...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~-----~~d~l~~ll~~~~ 264 (496)
T 3qz1_A 193 VQDLMKTWDHWSIQILDMVPFLRFFPNPGLWRLKQAIENRDHMVEKQLRRHKESMVA---GQ-----WRDMTDYMLQGVG 264 (496)
T ss_dssp HHTTTTTTSSHHHHHHHHCGGGCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS---SC-----CSSSHHHHTTSST
T ss_pred HHHHHHHhccchhHHHHhHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---CC-----ccchHHHHHHHHH
Confidence 0 00233443333 334667788888899999999888776422 22 6789999998765
Q ss_pred cCc---cccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcC----CCCCChhhcccchh
Q 048805 226 DGM---LVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKG----KLNINMKEIEKMEY 298 (364)
Q Consensus 226 ~~~---~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~----~~~~~~~~l~~l~~ 298 (364)
+.. ....++++++..++.++++||+|||+++++|++++|++||++|+|+|+|++++++. ++.+ ++++++|||
T Consensus 265 ~~~~~~~~~~l~~~~i~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~-~~~~~~lpy 343 (496)
T 3qz1_A 265 RQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVT-YKDRARLPL 343 (496)
T ss_dssp TCCC-----CCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCSSSSSSCCS-TTGGGSCHH
T ss_pred hccccCCcccccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCcccCCCC-hhhhhcCcH
Confidence 431 11268999999999999999999999999999999999999999999999999986 4556 999999999
Q ss_pred HHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC---------------ccccccccC
Q 048805 299 LKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT---------------SQKISFQTG 363 (364)
Q Consensus 299 L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~---------------~~f~PFg~G 363 (364)
|+|||+|+||++|++|..++|.+.+|++++||.|||||.|.++.+++||||++|++ +.|+|||.|
T Consensus 344 l~a~i~E~lRl~p~~~~~~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~pFg~G 423 (496)
T 3qz1_A 344 LNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRPDRFLEPGANPSALAFGCG 423 (496)
T ss_dssp HHHHHHHHHHHSCSSSSCCCEECSSCEECSSSEECTTCEEEECHHHHTTCTTTSSSTTSCCCCCCC---CCCCCCSSCCS
T ss_pred HHHHHHHHHHhcCCcccccCccCCCCceECCEEeCCCCEEEechHHhhCChhhcCCcccCCcccccCCCCCcCccCCCCC
Confidence 99999999999999999778999999999999999999999999999999999987 258999998
No 14
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=1.5e-56 Score=411.79 Aligned_cols=349 Identities=19% Similarity=0.254 Sum_probs=287.7
Q ss_pred CccccchhhcC---CCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcch-hcccCCcc
Q 048805 1 SHTWQLHQLLG---TLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPAN-ILLYECRD 76 (364)
Q Consensus 1 p~lG~~~~~~~---~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (364)
|++||++.+.. ..++..+.+|+++||+||++++|+.++|+++||+.++++++. ..|++++...... .....+.+
T Consensus 54 P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~~~~~~~~~~~~ 131 (503)
T 3s79_A 54 MGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKLGLQCIGMHEKG 131 (503)
T ss_dssp SSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHHHHHHHTCTTSS
T ss_pred ceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhhhhhhhccCCCc
Confidence 78999998832 345678999999999999999999999999999999999964 3566665433222 22233566
Q ss_pred eeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCc
Q 048805 77 IGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKAD 156 (364)
Q Consensus 77 ~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~ 156 (364)
++++.+|+.|+++|+.+ .+.|+...++.+.+.+.++++++++.+... .+.++.+|+.+.+..+++++++.++||.+++
T Consensus 132 ~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~-~~~~~~vdl~~~~~~~~~~vi~~~~fG~~~~ 209 (503)
T 3s79_A 132 IIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEV-TNESGYVDVLTLLRRVMLDTSNTLFLRIPLD 209 (503)
T ss_dssp STTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGT-BCTTSCBCHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred eeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCeEcHHHHHHHHHHHHHHHHHcCcccC
Confidence 77777899999999998 899999999999999999999999988764 3456789999999999999999999999986
Q ss_pred hhhh------hh------cc-ccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhh
Q 048805 157 EEEK------NI------GK-SNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQL 223 (364)
Q Consensus 157 ~~~~------~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 223 (364)
..+. .+ .. ..++..++...++..+..+.+.+++.++++++++....... .....|+++.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~d~l~~ll~~ 285 (503)
T 3s79_A 210 ESAIVVKIQGYFDAWQALLIKPDIFFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEK----LEECMDFATELILA 285 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCHHHHHSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT----TTTTCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHhcCcHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----cchHHHHHHHHHHh
Confidence 4432 00 01 11111222334667778888999999999988877643111 11245999999987
Q ss_pred hhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHH
Q 048805 224 RKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVV 303 (364)
Q Consensus 224 ~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i 303 (364)
..++ .++++++..++..+++||+|||+++++|++++|++||++|+|+|+||+++++ ++.++.+++++||||+|||
T Consensus 286 ~~~~----~l~~~~i~~~~~~~~~AG~~Tta~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~-~~~~~~~~~~~lpyl~avi 360 (503)
T 3s79_A 286 EKRG----DLTRENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIG-ERDIKIDDIQKLKVMENFI 360 (503)
T ss_dssp HHTT----SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHTT-TSCCCHHHHTTCHHHHHHH
T ss_pred cccC----CCCHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CCCCCHHHHhcCHHHHHHH
Confidence 6543 6999999999999999999999999999999999999999999999999998 5679999999999999999
Q ss_pred hhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC---------------ccccccccCC
Q 048805 304 KETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT---------------SQKISFQTGF 364 (364)
Q Consensus 304 ~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~---------------~~f~PFg~G~ 364 (364)
+|+||++|++|... |.+.+|++++||.|||||.|+++.+++||| ++|++ ..|+|||.|-
T Consensus 361 ~E~lRl~p~~~~~~-r~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d-~~~~dp~~F~PeRf~~~~~~~~~~pFg~G~ 434 (503)
T 3s79_A 361 YESMRYQPVVDLVM-RKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENFAKNVPYRYFQPFGFGP 434 (503)
T ss_dssp HHHHHHSCSSCCEE-EECSSCEEETTEEECTTCEEEECHHHHTTT-SSCSSTTSCCGGGGSSCCCTTTCCSSCCST
T ss_pred HhhhccCCCccccc-ccccCCeeECCEEECCCCEEEeehHHhCCC-ccCCChhhCChhhcCCCCCcccccCCCCCC
Confidence 99999999999965 999999999999999999999999999998 89977 2488999993
No 15
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=100.00 E-value=5.2e-56 Score=403.21 Aligned_cols=337 Identities=18% Similarity=0.289 Sum_probs=274.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcch-hc---ccCCcceeeccCChhH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPAN-IL---LYECRDIGFANYGEYW 86 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 86 (364)
++.++..+.+|+++|||||++++++.+.|+|+||+.+++|+.++ .+.+++...... .. ...+.++++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 56789999999999999999999999999999999999999642 333332211100 00 1124455556679999
Q ss_pred HHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhh------
Q 048805 87 RKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEK------ 160 (364)
Q Consensus 87 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~------ 160 (364)
+++|+.+ .+.|+.+.++.+.+.+.+.++.+++.+... .+++.++|+.+.+..+++++++.++||.++.....
T Consensus 87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~ 164 (456)
T 3mdm_A 87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAK-ADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLS 164 (456)
T ss_dssp HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHT-CSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHH
T ss_pred HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHH
Confidence 9999998 999999999999999999999999999875 44567899999999999999999999999875321
Q ss_pred --------hh--ccccccchhhh---hHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcC
Q 048805 161 --------NI--GKSNKFDVLSG---LIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDG 227 (364)
Q Consensus 161 --------~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 227 (364)
.+ ...+++.+++. ..+...+....+.+++.++++++++.... +... ..|+++.+++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~~-----~~d~l~~ll~~~~-- 236 (456)
T 3mdm_A 165 QAVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKR-GEEV-----PADILTQILKAEE-- 236 (456)
T ss_dssp HHHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC-----CCCHHHHHHHHTS--
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccc-----hhhHHHHHHHhcC--
Confidence 00 01122222222 22344556667777888888887766533 1222 5699999998652
Q ss_pred ccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhc
Q 048805 228 MLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETL 307 (364)
Q Consensus 228 ~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~l 307 (364)
..++++++.+++..+++||+|||+++++|++++|++||++|+|+++|+++++++++.++.+++++||||+|||+|+|
T Consensus 237 ---~~~~~~~l~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~E~l 313 (456)
T 3mdm_A 237 ---GAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKESL 313 (456)
T ss_dssp ---SCSSSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCSSCCHHHHHHCHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHcCCCCCCCHHHHhcCHHHHHHHHHHH
Confidence 25789999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred cCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------------ccccccccC
Q 048805 308 RLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-----------------SQKISFQTG 363 (364)
Q Consensus 308 Rl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-----------------~~f~PFg~G 363 (364)
|++|+++... |.+.+|++++||.|||||.|+++.+++||||++|++ ..|+|||.|
T Consensus 314 Rl~p~~~~~~-r~~~~d~~i~g~~Ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeRfl~~~~~~~~~~~pFg~G 385 (456)
T 3mdm_A 314 RLYPPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTYFPFSLG 385 (456)
T ss_dssp HHCCSSCCEE-EEECSCEEETTEEECSSEEEEECHHHHHTCTTTSSSTTSCCGGGGSTTSCCCSSSCCTTCCG
T ss_pred HhCCCccccc-cccCCceeECCEEECCCCEEEeehHHhcCCchhcCCccccCccccCCCCCCCCCcccCCCCC
Confidence 9999999754 999999999999999999999999999999999987 247899998
No 16
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=100.00 E-value=4.6e-57 Score=409.60 Aligned_cols=343 Identities=17% Similarity=0.246 Sum_probs=287.8
Q ss_pred CccccchhhcCCCCchHHHHHHHHhC-CeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYG-ALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.+|+++|| +||++++++.++|+|+||+.+++++.++...+++++......... +.+.++
T Consensus 13 P~iG~~~~~-~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~--g~~~~~ 89 (450)
T 3gw9_A 13 PILGHIIQF-GKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVPVF--GEGVAY 89 (450)
T ss_dssp TTTBTHHHH-HHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHHHH--CTTSGG
T ss_pred chhccHHHH-ccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHHHh--cCCccc
Confidence 899999999 6789999999999999 999999999999999999999999988777777765443333222 556666
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHH-HHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLIN-KIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE 158 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~ 158 (364)
..+++.|+++|+.+ .+.|+...++.+.+.+.++++++++ .+.. .++.+|+.+.+..+++++++.++||.++...
T Consensus 90 ~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~----~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~ 164 (450)
T 3gw9_A 90 AAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDK----DEGEINLLEDCSTMIINTACQCLFGEDLRKR 164 (450)
T ss_dssp GSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCS----SEEEEEHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred CCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhcc----CCCcccHHHHHHHHHHHHHHHHHcCcchhhh
Confidence 66799999999998 9999999999999999999999998 5542 3467999999999999999999999987643
Q ss_pred h---h--------------hhccccccchhh-hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHH
Q 048805 159 E---K--------------NIGKSNKFDVLS-GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDIL 220 (364)
Q Consensus 159 ~---~--------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l 220 (364)
. . ....+|++.+++ ...++..++...+.+++.++++++++.... .... ..|+++.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~-~~~~-----~~d~l~~l 238 (450)
T 3gw9_A 165 LDARRFAQLLAKMESSLIPAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN-KDSS-----TSDLLSGL 238 (450)
T ss_dssp SCHHHHHHHHHHHHHTCCGGGGTCGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSCC-----CCSHHHHH
T ss_pred hhhHHHHHHHHHHHhccccchhcccchhccCCchhHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCc-----cchHHHHH
Confidence 2 1 001334443332 234566777888899999999888765322 1122 67999999
Q ss_pred HhhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHh--hCchHHHHHHHHHHHhhcCCCCCChhhc-ccch
Q 048805 221 LQLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELV--KNPTSMKRAREEVRSVAKGKLNINMKEI-EKME 297 (364)
Q Consensus 221 ~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~--~~p~~~~~l~~Ei~~~~~~~~~~~~~~l-~~l~ 297 (364)
+++...++ ..++++++..+++.+++||+|||+++++|++++|+ .||++|+|+|+|++++ +..++.+++ ++||
T Consensus 239 l~~~~~~~--~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~~~p~~~~~l~~Ei~~~---~~~~~~~~~~~~lp 313 (450)
T 3gw9_A 239 LSAVYRDG--TPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEF---PAQLNYNNVMDEMP 313 (450)
T ss_dssp HHCBCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGHHHHHHHHHHHTTC---CSSCCHHHHHHHCH
T ss_pred HHhhccCC--CCCCHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHcCCcchhHHHHHHHHHHhc---cCCCChHHHHHhcH
Confidence 98764432 36999999999999999999999999999999999 9999999999999998 455799999 9999
Q ss_pred hHHHHHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-------------ccccccccC
Q 048805 298 YLKCVVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-------------SQKISFQTG 363 (364)
Q Consensus 298 ~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-------------~~f~PFg~G 363 (364)
||+|||+|+||++|+++.. +|.+.+|++++||.|||||.|+++.+++||||++|++ ..|+|||.|
T Consensus 314 yl~a~i~E~lRl~p~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~~~~~~~~~~Fg~G 391 (450)
T 3gw9_A 314 FAERCARESIRRDPPLLML-MRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPERDEKVEGAFIGFGAG 391 (450)
T ss_dssp HHHHHHHHHHHHSCSCCCE-EEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCSSTTCCCTTCCG
T ss_pred HHHHHHHHHHHhCCchhcc-ccccccccccCCEEECCCCEEEEChHHhhCChhhcCCccccCCCcCcCCCCceeCCCCC
Confidence 9999999999999999974 5999999999999999999999999999999999987 258999998
No 17
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=100.00 E-value=3e-55 Score=399.03 Aligned_cols=344 Identities=18% Similarity=0.279 Sum_probs=277.3
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhc-ccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANIL-LYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 79 (364)
|++||++.+..++++..+.+|+++||+||++++++.+.|+|+||+.+++|+.+. .|.+... ...... ...+.++++
T Consensus 12 p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~~~~~~~l~~ 88 (470)
T 2ij2_A 12 GELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVRDFAGDGLFT 88 (470)
T ss_dssp GGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHHHHHTTSGGG
T ss_pred CccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHHHhcCCceEE
Confidence 689999998556788999999999999999999999999999999999999642 3433221 111111 111344444
Q ss_pred c-cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh
Q 048805 80 A-NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE 158 (364)
Q Consensus 80 ~-~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~ 158 (364)
. .+|+.|+++||.+ .+.|++..++.+.+.+.+.++++++.+... ..++++|+.+.+..+++++++.++||.+++..
T Consensus 89 ~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~ 165 (470)
T 2ij2_A 89 SWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERL--NADEHIEVPEDMTRLTLDTIGLCGFNYRFNSF 165 (470)
T ss_dssp SCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTC--CTTCCEEHHHHHHHHHHHHHHHHHHSCCCCGG
T ss_pred cCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhh--CCCCeEEHHHHHHHHHHHHHHHHHcCCccccc
Confidence 4 4799999999998 899999999999999999999999998753 24568999999999999999999999987643
Q ss_pred --hh----------hhc-------cccccchhh-hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHH
Q 048805 159 --EK----------NIG-------KSNKFDVLS-GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVD 218 (364)
Q Consensus 159 --~~----------~~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (364)
++ .+. ..+++.+++ ...++..+....+.+++.++++++++.. .. ..|+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~-----~~dll~ 235 (470)
T 2ij2_A 166 YRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASG-----EQ-----SDDLLT 235 (470)
T ss_dssp GCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CC-----CSSHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cC-----chhHHH
Confidence 11 000 012222222 2234556667788888888888876542 12 568999
Q ss_pred HHHhhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchh
Q 048805 219 ILLQLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEY 298 (364)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~ 298 (364)
.|++...++. +..++++++..++..+++||+|||+++++|++++|++||++|+|+|+|++++++++ .++++++++|||
T Consensus 236 ~ll~~~~~~~-~~~ls~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~-~~~~~~~~~lpy 313 (470)
T 2ij2_A 236 HMLNGKDPET-GEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKY 313 (470)
T ss_dssp HHHHCCCTTT-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCSS-SCCHHHHHTCHH
T ss_pred HHHhccCccc-CCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCC-CCCHHHHhCCHH
Confidence 9998754321 23699999999999999999999999999999999999999999999999998864 589999999999
Q ss_pred HHHHHhhhccCCCCCCcCCcccccccccccc-eecCCCcEEEEeeeecccCCCCC-CC-----------------ccccc
Q 048805 299 LKCVVKETLRLHPPAPLLLPREIAESLKWRG-YDIPSKTRVIVNAYGQFKGIPKV-GT-----------------SQKIS 359 (364)
Q Consensus 299 L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~g-~~IpkGt~v~~~~~~~~~d~~~~-~~-----------------~~f~P 359 (364)
|+|||+|+||++|+++.. +|.+.+|++++| |.|||||.|+++.+++||||++| ++ ..|+|
T Consensus 314 l~a~i~E~lRl~p~~~~~-~r~~~~d~~~~g~~~Ip~Gt~V~~~~~~~~rdp~~~g~dP~~F~PeR~~~~~~~~~~~~~p 392 (470)
T 2ij2_A 314 VGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFKP 392 (470)
T ss_dssp HHHHHHHHHHHSCSSCEE-EEEESSCEEETTTEEECTTCEEEEEHHHHTTCHHHHCSCTTSCCGGGGSSGGGSCTTSCCT
T ss_pred HHHHHHHHHhcCCCcccc-ceeccCCcccCCceEeCCCCEEEechHHhcCCHhhhCCCccccCccccCCCCcCCCccccC
Confidence 999999999999999985 599999999999 99999999999999999999999 44 25689
Q ss_pred cccC
Q 048805 360 FQTG 363 (364)
Q Consensus 360 Fg~G 363 (364)
||.|
T Consensus 393 FG~G 396 (470)
T 2ij2_A 393 FGNG 396 (470)
T ss_dssp TCCG
T ss_pred CCCC
Confidence 9998
No 18
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=100.00 E-value=1.5e-55 Score=399.55 Aligned_cols=340 Identities=16% Similarity=0.273 Sum_probs=262.8
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+ ..+++.++.+++++||+||++++++.++++|++|+.+++|+.++...|++++......... +.++ +
T Consensus 14 P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~--g~~~-~- 88 (455)
T 2cib_A 14 DEHGHLEEF-RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF--GEGV-V- 88 (455)
T ss_dssp BTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH--C------
T ss_pred CCccCHHHH-hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc--CCcc-c-
Confidence 789999998 7889999999999999999999999999999999999999987666676665432221111 2333 3
Q ss_pred cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh--
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE-- 158 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~-- 158 (364)
.+++.|+++|+.+ .+.|++..++.+.+.+.++++.+++.+.. ++++|+.+.+..+++++++.++||.++...
T Consensus 89 ~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~~-----~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~~ 162 (455)
T 2cib_A 89 FDASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWGE-----AGEIDLLDFFAELTIYTSSACLIGKKFRDQLD 162 (455)
T ss_dssp -----------------CCHHHHHHHHHHHHHHHHHHHTTCCS-----EEEEEHHHHHHHHHHHHHHHHHTCHHHHTTCC
T ss_pred cCcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhCC-----CCcEeHHHHHHHHHHHHHHHHHcCCCcchhhh
Confidence 3589999999998 99999999999999999999999987642 357999999999999999999999987532
Q ss_pred hh------hh----c----cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhh
Q 048805 159 EK------NI----G----KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLR 224 (364)
Q Consensus 159 ~~------~~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 224 (364)
.. .+ . .++|+.. ...++..++...+.+++.++++++++.... .. ...|+++.|+++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~p~l~~--~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~----~~~dll~~ll~~~ 233 (455)
T 2cib_A 163 GRFAKLYHELERGTDPLAYVDPYLPI--ESFRRRDEARNGLVALVADIMNGRIANPPT---DK----SDRDMLDVLIAVK 233 (455)
T ss_dssp HHHHHHHHHHHTTCCGGGGTCTTCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CCCHHHHHHHCB
T ss_pred HHHHHHHHHHHhhhhHHHHhcccCCC--hhHHHHHHHHHHHHHHHHHHHHHHHhcccC---CC----CcccHHHHHHHhh
Confidence 11 00 0 1122210 123455667778888888888887754311 11 1349999999875
Q ss_pred hcCccccc-cCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHH
Q 048805 225 KDGMLVAE-LSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVV 303 (364)
Q Consensus 225 ~~~~~~~~-~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i 303 (364)
..++ .. ++++++..++..+++||+|||+++++|++++|++||++|+|||+||+++++++..++.+++++||||+|||
T Consensus 234 ~~~~--~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i 311 (455)
T 2cib_A 234 AETG--TPRFSADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVL 311 (455)
T ss_dssp CTTS--SBSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGCCCHHHHTTSCCHHHHHHH
T ss_pred hhcC--CCCCCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHhcCHHHHHHH
Confidence 4332 24 89999999999999999999999999999999999999999999999999876778999999999999999
Q ss_pred hhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC--------------------ccccccccC
Q 048805 304 KETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT--------------------SQKISFQTG 363 (364)
Q Consensus 304 ~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~--------------------~~f~PFg~G 363 (364)
+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 312 ~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~lpFG~G 390 (455)
T 2cib_A 312 KETLRLHPPLII-LMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAG 390 (455)
T ss_dssp HHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCGGGGSTTTCHHHHCTTTCCTTCCG
T ss_pred HHHHhcCCcccc-cceeeCCCceECCEEECCCCEEEEChHHhcCCcccCCCccccCcccCCCCCcccccCCccccCCCCC
Confidence 999999999986 56999999999999999999999999999999999977 038899998
No 19
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=100.00 E-value=3.2e-55 Score=396.20 Aligned_cols=336 Identities=19% Similarity=0.210 Sum_probs=272.8
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+ ..+++ ++.+++++||+||+++++|.+.|+++||+.+++|+.++...|+.+... ...... +...++.
T Consensus 21 P~iG~~~~~-~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~-~~~~~~--g~~~l~~ 95 (444)
T 2ve3_A 21 PWLGETLNF-LNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWPL-STRILL--GPNALAT 95 (444)
T ss_dssp TTTBTHHHH-HHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECCH-HHHHHH--CTTSGGG
T ss_pred CccccHHHH-hcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchhH-HHHHHh--Ccccccc
Confidence 789999988 45566 888999999999999998889999999999999998765555532211 111111 2323455
Q ss_pred cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchh-h
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE-E 159 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~-~ 159 (364)
.+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.. ++++|+.+.+..+++++++.++|| ..... .
T Consensus 96 ~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~vd~~~~~~~~~~~vi~~~~fG-~~~~~~~ 168 (444)
T 2ve3_A 96 QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGK-----ANEVIWYPQLRRMTFDVAATLFMG-EKVSQNP 168 (444)
T ss_dssp CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHH-----SSEEEHHHHHHHHHHHHHHHHHTC-HHHHSCT
T ss_pred CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcC-----CCcEeHHHHHHHHHHHHHHHHHcC-CCcccHH
Confidence 6799999999998 99999999999999999999999999853 368999999999999999999999 22211 1
Q ss_pred h----------hhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCcc
Q 048805 160 K----------NIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGML 229 (364)
Q Consensus 160 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 229 (364)
. .+...++..+. ....+..++...+.+++.++++++++.. .. ..|+++.|+++..+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~-----~~d~l~~ll~~~~~~~- 236 (444)
T 2ve3_A 169 QLFPWFETYIQGLFSLPIPLPN-TLFGKSQRARALLLAELEKIIKARQQQP-----PS-----EEDALGILLAARDDNN- 236 (444)
T ss_dssp THHHHHHHHHHHHSSCCCCSTT-SHHHHHHHHHHHHHHHHHHHHHHHHTSC-----CC-----CSSHHHHHHHCBCTTS-
T ss_pred HHHHHHHHHHHHHhcCCccCCC-cHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CC-----ccCHHHHHHhccccCC-
Confidence 1 00011111111 1234556677788888888888876541 12 6789999998754322
Q ss_pred ccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccC
Q 048805 230 VAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRL 309 (364)
Q Consensus 230 ~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl 309 (364)
..++++++.+++..+++||+|||+++++|++++|++||++|+|||+|+++++++. .++.+++++||||+|||+|+||+
T Consensus 237 -~~l~~~~i~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~-~~~~~~l~~lpyl~a~i~E~lRl 314 (444)
T 2ve3_A 237 -QPLSLPELKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQ-ELTAETLKKMPYLDQVLQEVLRL 314 (444)
T ss_dssp -CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHSSCCSS-CCCHHHHTTCHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCC-CCChhhhhcChHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999999998765 78999999999999999999999
Q ss_pred CCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC------------c--------cccccccC
Q 048805 310 HPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------S--------QKISFQTG 363 (364)
Q Consensus 310 ~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------~--------~f~PFg~G 363 (364)
+|+++.. +|.+.+|++++||.||||+.|+++.+++||||++|++ + .|+|||.|
T Consensus 315 ~p~~~~~-~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~l~~~~~~~~~~~~~~pFG~G 387 (444)
T 2ve3_A 315 IPPVGGG-FRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGSATHNPPFAHVPFGGG 387 (444)
T ss_dssp SCSSCEE-EEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCGGGSSTTSTTTTSCTTSCCTTCCG
T ss_pred CCCccCc-cceeCCCeeECCEEECCCCEEEechHHhcCChhhcCCcCccCccccCCCCcccCCCCceeeCCCCC
Confidence 9999985 5999999999999999999999999999999999977 1 18999998
No 20
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=100.00 E-value=2.1e-55 Score=400.17 Aligned_cols=337 Identities=19% Similarity=0.327 Sum_probs=256.3
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccc-cCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVT-SNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.++++ |||||++++++.++++|+||+.+++|+.++ .| .+.+........ .+...++
T Consensus 32 P~iG~~~~~-~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~--~g~~~l~ 105 (467)
T 3dbg_A 32 PLLGHGWRL-ARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL--LGKEGVA 105 (467)
T ss_dssp STTHHHHHH-HHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC----------------------
T ss_pred CcccchHHh-ccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh--cCCCCcc
Confidence 799999999 6789999999988 999999999999999999999999999876 44 322222111111 1323456
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhh
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEE 159 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~ 159 (364)
..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+. .++++|+.+.+..+++++++.++||.+.....
T Consensus 106 ~~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~-----~~~~~d~~~~~~~~~~~vi~~~~~g~~~~~~~ 179 (467)
T 3dbg_A 106 TANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQ-----PGKTVDATSESFRVAVRVAARCLLRGQYMDER 179 (467)
T ss_dssp ----------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSC-----TTSCEEHHHHHHHHHHHHHHHHHSCSSCCHHH
T ss_pred cCCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhc-----cCCcCcHHHHHHHHHHHHHHHHHhCCcccchh
Confidence 67799999999998 9999999999999999999999999874 34789999999999999999999999987532
Q ss_pred h---------hhc------ccc--ccchhh-hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHH
Q 048805 160 K---------NIG------KSN--KFDVLS-GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILL 221 (364)
Q Consensus 160 ~---------~~~------~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (364)
. ... ..+ ++.+++ ...++..+....+.+++.++++++++.. .. ..|+++.|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~-----~~-----~~dll~~ll 249 (467)
T 3dbg_A 180 AERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRASG-----QK-----PDDLLTALL 249 (467)
T ss_dssp HHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTCC-----SS-----CCSHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhcC-----CC-----chHHHHHHH
Confidence 1 000 111 111111 1234566777888888888888776542 12 679999999
Q ss_pred hhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHH
Q 048805 222 QLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKC 301 (364)
Q Consensus 222 ~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a 301 (364)
+....++ ..++++++..++..+++||+|||+++++|++++|++||++|+|||+|++++.++ ..++.+++++||||+|
T Consensus 250 ~~~~~~~--~~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~Ei~~~~~~-~~~~~~~l~~l~yl~a 326 (467)
T 3dbg_A 250 EAKDDNG--DPIGEQEIHDQVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGG-RPVAFEDVRKLRHTGN 326 (467)
T ss_dssp TC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTT-SCCCHHHHTTCHHHHH
T ss_pred hhccCCC--CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC-CCCCHHHHhhCHHHHH
Confidence 8765432 369999999999999999999999999999999999999999999999999886 6789999999999999
Q ss_pred HHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-------------------cccccccc
Q 048805 302 VVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-------------------SQKISFQT 362 (364)
Q Consensus 302 ~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-------------------~~f~PFg~ 362 (364)
||+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.
T Consensus 327 ~i~E~lRl~p~~~~-~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRfl~~~~~~~~~~~~~~FG~ 405 (467)
T 3dbg_A 327 VIVEAMRLRPAVWV-LTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRWLPERAANVPKYAMKPFSA 405 (467)
T ss_dssp HHHHHHHHSCSCCC-EEEECSSCEEETTEEECTTCEEEECHHHHHTCTTTCTTTTCCCGGGGSHHHHTTSCTTSCCSSCS
T ss_pred HHHHHhhcCCCccc-cceeeCCCccCCCEEECCCCEEEEChHHhcCCchhcCCccccCCccCCCCccccCCCccccCCCC
Confidence 99999999999987 56999999999999999999999999999999999987 24789999
Q ss_pred C
Q 048805 363 G 363 (364)
Q Consensus 363 G 363 (364)
|
T Consensus 406 G 406 (467)
T 3dbg_A 406 G 406 (467)
T ss_dssp S
T ss_pred C
Confidence 8
No 21
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=100.00 E-value=3.5e-55 Score=398.28 Aligned_cols=340 Identities=16% Similarity=0.227 Sum_probs=280.7
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+ ..+++.++.+|+++||+||+++++|.++|+|++++.+++++.++...+.++........ ...|.+.++.
T Consensus 21 P~iG~l~~~-~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~~~-~~~g~g~~~~ 98 (461)
T 3i3k_A 21 PFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT-PVFGKGVAYD 98 (461)
T ss_dssp TTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH-HHHCTTSGGG
T ss_pred CccccHHhh-ccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHhhh-hhcCCeeeeC
Confidence 899999999 68899999999999999999999999999999999999999876655543322111111 1125566677
Q ss_pred cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhh
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEK 160 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~ 160 (364)
.+|+.|+.+|+++ .+.|+...++.+.+.+.++++++++.|... ..+|+.+.+..++.++++.++||.++.....
T Consensus 99 ~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~-----~~~dl~~~~~~~~~~~~~~~~~G~~~~~~~~ 172 (461)
T 3i3k_A 99 VPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGES-----GEKNVFEALSELIILTASHCLHGKEIRSQLN 172 (461)
T ss_dssp SCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSE-----EEEEHHHHHHHHHHHHHHHHHTCHHHHHTCC
T ss_pred CCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhc-----CCcCHHHHHHHHHHHHHHHHHccHhhhhHHH
Confidence 6799999999998 899999999999999999999999887542 5689999999999999999999987643211
Q ss_pred --------hhc--------ccc-ccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhh
Q 048805 161 --------NIG--------KSN-KFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQL 223 (364)
Q Consensus 161 --------~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 223 (364)
.+. ..| |+. ....++..+....+.+++.+.++++++.. .. ..|+++.+++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~P~~l~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~-----~~d~l~~ll~~ 240 (461)
T 3i3k_A 173 EKVAQLYADLDGGFSHAAWLLPGWLP--LPSFRRRDRAHREIKDIFYKAIQKRRQSQ-----EK-----IDDILQTLLDA 240 (461)
T ss_dssp HHHHHHHHHHHTTSSHHHHHSCTTSC--CHHHHHHHHHHHHHHHHHHHHHHHHTTCC-----CC-----CCSHHHHHHTC
T ss_pred HHHHHHHHHHHhccccchhhcccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cc-----cccHHHHHHHh
Confidence 000 111 111 12345566777788888888888776542 22 67999999987
Q ss_pred hhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCC-CCCChhhcccchhHHHH
Q 048805 224 RKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGK-LNINMKEIEKMEYLKCV 302 (364)
Q Consensus 224 ~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~l~~L~a~ 302 (364)
..+++ ..++++++..++..+++||+|||+++++|++++|++||++|+|+|+|++++++++ ..++.+++++||||+||
T Consensus 241 ~~~~~--~~l~~~~i~~~~~~l~~ag~~Tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~l~~l~a~ 318 (461)
T 3i3k_A 241 TYKDG--RPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRC 318 (461)
T ss_dssp BCTTS--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCTTCCCCCHHHHHTCHHHHHH
T ss_pred hhccC--CCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCCCCCCCHHHHhcChHHHHH
Confidence 65432 3699999999999999999999999999999999999999999999999999875 34699999999999999
Q ss_pred HhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-------------------ccccccccC
Q 048805 303 VKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-------------------SQKISFQTG 363 (364)
Q Consensus 303 i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-------------------~~f~PFg~G 363 (364)
|+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||+|
T Consensus 319 i~E~lRl~p~~~~-~~r~~~~d~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~p~~F~P~Rfl~~~~~~~~~~~~~~Fg~G 397 (461)
T 3i3k_A 319 IKETLRLRPPIMI-MMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQDNPASGEKFAYVPFGAG 397 (461)
T ss_dssp HHHHHHHSCSCCC-EEEEECSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTCCCGGGGGSCCHHHHSSSSSCTTCCG
T ss_pred HHHHHhcCCCccc-cccccCCCccCCCEEECCCCEEEEChHHhcCCcccCCCcccCCCCCCCCCCCCCCCCcceeCCCCC
Confidence 9999999999976 56999999999999999999999999999999999987 257899998
No 22
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=100.00 E-value=4.8e-54 Score=393.61 Aligned_cols=339 Identities=19% Similarity=0.217 Sum_probs=268.3
Q ss_pred CCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchh--cccCCcceeeccCChhHHHH
Q 048805 12 TLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANI--LLYECRDIGFANYGEYWRKV 89 (364)
Q Consensus 12 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 89 (364)
.+++.++.+|+++|||||++++|+.++|+|+||+.+++|+.++ ..|++++....+.. ....+...++..+|+.|+++
T Consensus 32 ~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r~~~~~~~~~~~~~~~~~~l~~~~g~~w~~~ 110 (487)
T 3n9y_A 32 HKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKD 110 (487)
T ss_dssp GGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCCCCCHHHHHHHHHTTCCCCGGGCCHHHHHHH
T ss_pred cchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCCCCCcHHHHHHHHccccCCCccCCcHHHHHH
Confidence 3678899999999999999999999999999999999999765 46776665432211 11112334566779999999
Q ss_pred HHHHHhh-ccchhHhhhhHHHHHHHHHHHHHHHHhhh---hcCCccccHHHHHHHHHHhHHHHHhhccCCchhhh-----
Q 048805 90 RKICVLE-LLSLRRVQSFQHIRDDEVSSLINKIRHLC---FNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEK----- 160 (364)
Q Consensus 90 R~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~----- 160 (364)
|+.+ .+ +|+.+.++.+.+.+++.++++++.+.... .+++.++|+.+.+..+++++++.++||.++...+.
T Consensus 111 Rr~l-~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~ 189 (487)
T 3n9y_A 111 RVAL-NQEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNPE 189 (487)
T ss_dssp HHHH-HHHHTSHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSSSEEECCHHHHHHHHHHHHHHHHHSSCCCTTSSSCCHH
T ss_pred HHhc-CcccCCchHHHHhhhHHHHHHHHHHHHHHHHhcccccCCCCccHHHHHHHHHHHHHHHHHhcccccccCCCCChH
Confidence 9998 76 69999999999999999999999987642 12356899999999999999999999999853211
Q ss_pred ----------hhc------ccc-cc-chh-hhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHH
Q 048805 161 ----------NIG------KSN-KF-DVL-SGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILL 221 (364)
Q Consensus 161 ----------~~~------~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (364)
.+. ..+ ++ .++ ....++..+..+.+.+++.+.++++.+........ .....|+++.++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~d~l~~ll 266 (487)
T 3n9y_A 190 AQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWELRQKGSV---HHDYRGILYRLL 266 (487)
T ss_dssp HHHHHHHHHHHHHHHGGGTTSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---ccchHHHHHHHH
Confidence 000 111 11 111 11223334445555666777776665543221111 112578999998
Q ss_pred hhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHH
Q 048805 222 QLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKC 301 (364)
Q Consensus 222 ~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a 301 (364)
+. ..++++++.+++..+++||+|||+++++|++++|++||++|+|+++||++++++++.++.+++++||||+|
T Consensus 267 ~~-------~~l~~~ei~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a 339 (487)
T 3n9y_A 267 GD-------SKMSFEDIKANVTEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPLLKA 339 (487)
T ss_dssp HS-------CSSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCHHHHTTSCHHHHH
T ss_pred hc-------CCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhChHHHHHHHHHHHHhhcccccchhhhhhhCHHHHH
Confidence 63 25899999999999999999999999999999999999999999999999998766677999999999999
Q ss_pred HHhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC------------------ccccccccC
Q 048805 302 VVKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------------SQKISFQTG 363 (364)
Q Consensus 302 ~i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------------~~f~PFg~G 363 (364)
||+|+||++|+++. ++|.+.+|++++||.|||||.|+++.+++||||++|++ ..|+|||.|
T Consensus 340 vi~E~lRl~p~~~~-~~R~~~~d~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~dp~~F~PeR~l~~~~~~~~~~~~pFg~G 418 (487)
T 3n9y_A 340 SIKETLRLHPISVT-LQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPENFDPTRWLSKDKNITYFRNLGFGWG 418 (487)
T ss_dssp HHHHHHHHSCSSSE-EEEECSSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTCSCTTSSTTTCCTTCCG
T ss_pred HHHHHhhhCCcccc-cceeecCceeeCCEEECCCCEEEeCcHHhcCCcccCCCcccCChhhcCCCCCCCCCCCCCCCCCC
Confidence 99999999999986 57999999999999999999999999999999999987 247899998
No 23
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=100.00 E-value=1.2e-50 Score=364.43 Aligned_cols=321 Identities=17% Similarity=0.205 Sum_probs=257.3
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhc---ccCCcc
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANIL---LYECRD 76 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~ 76 (364)
|++|++......+++.++.++ ++|||||++++ ++.++|+++||+.+++|+.++ .|++++........ ...+ .
T Consensus 35 p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~-~ 110 (436)
T 2cd8_A 35 LDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTPLTEAEAALN-H 110 (436)
T ss_dssp CBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSCCCTTGGGTC-C
T ss_pred ccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccccccccccccc-c
Confidence 678988633377899999999 99999999998 778899999999999999865 56665431111110 1112 3
Q ss_pred eeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCC
Q 048805 77 IGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKA 155 (364)
Q Consensus 77 ~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~ 155 (364)
.++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.|... .++++|+.+.+ ..+++++++. +||.+.
T Consensus 111 ~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~---~~~~vd~~~~~~~~~~~~vi~~-~~G~~~ 185 (436)
T 2cd8_A 111 NMLESDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAA---PDGRADLMESLAWPLPITVISE-LLGVPE 185 (436)
T ss_dssp SGGGCCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTC---TTSCEEHHHHTTTHHHHHHHHH-HHTCCG
T ss_pred cccccCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCcchHHHHHHHHHHHHHHH-HhCCCH
Confidence 34567799999999998 999999999999999999999999999742 35789999977 5799999998 799987
Q ss_pred chhhhhhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCH
Q 048805 156 DEEEKNIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQ 235 (364)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 235 (364)
...+....+...+.... ...+..++...+.+++.++++++++. . ..|+++.|+++..++ +..+++
T Consensus 186 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~r~~~-------~-----~~d~l~~ll~~~~~~--~~~ls~ 250 (436)
T 2cd8_A 186 PDRAAFRVWTDAFVFPD-DPAQAQTAMAEMSGYLSRLIDSKRGQ-------D-----GEDLLSALVRTSDED--GSRLTS 250 (436)
T ss_dssp GGHHHHHHHHHHHHSCS-STTHHHHHHHHHHHHHHHHHHHHTTS-------C-----CCSHHHHHHHHHHHC--TTTSCH
T ss_pred HHHHHHHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHHHhcC-------C-----CCCHHHHHHHhhhcc--CCCCCH
Confidence 64332111000000000 01455667778888888888877643 1 568999999876542 136999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCc
Q 048805 236 DNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPL 315 (364)
Q Consensus 236 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~ 315 (364)
+++..++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++.
T Consensus 251 ~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~ 312 (436)
T 2cd8_A 251 EELLGMAHILLVAGHETTVNLIANGMYALLSHPDQLAALRADM------------------TLLDGAVEEMLRYEGPVES 312 (436)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSBSS
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHhhCh------------------hhHHHHHHHHHHhcCcccC
Confidence 9999999999999999999999999999999999999999983 5899999999999999996
Q ss_pred CCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 316 LLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 316 ~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
.++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 313 ~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~~pFG~G 370 (436)
T 2cd8_A 313 ATYRFPVEPVDLDGTVIPAGDTVLVVLADAHRTPERFPDPHRFDIRRDTAGHLAFGHG 370 (436)
T ss_dssp CCCBEESSCEEETTEEECTTCCEEECHHHHTTCTTTSSSTTSCCTTSCCTTCCTTCCS
T ss_pred ceeEEeCCCeEECCEEECCCCEEEeChHHhCCCcccCCCccccCCCCCCCCCCCCCCC
Confidence 677999999999999999999999999999999999987 358899998
No 24
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=100.00 E-value=1.4e-49 Score=354.94 Aligned_cols=323 Identities=12% Similarity=0.113 Sum_probs=254.9
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEec-CccEEEecCHHHHHHHHhhCC-ccccCCCCCCcchhc---ccCCc
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFG-NSPTLVVSSAELAGEMFKTHD-IVTSNRPKTTPANIL---LYECR 75 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~vvi~~~~~i~~i~~~~~-~~~~~~~~~~~~~~~---~~~~~ 75 (364)
|++|++.. +++..+.+|+ +||||+++.++ |.+.++|++++.+++++.++. ..+..++........ ...+.
T Consensus 10 P~~g~~~~----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 84 (404)
T 1jfb_A 10 PFSRASGP----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASGKQAAKAK 84 (404)
T ss_dssp SCCCSSTT----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHHHHHTTSC
T ss_pred CCCCCcCC----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccccchhccc
Confidence 67787653 8999999996 59999999875 667778999999999998753 122223322211110 11122
Q ss_pred ceeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCC
Q 048805 76 DIGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKA 155 (364)
Q Consensus 76 ~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~ 155 (364)
..++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... ...++++|+.+.+...+.++++..+||.+.
T Consensus 85 ~~l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-~~~~~~~d~~~~~~~~~~~~i~~~~~G~~~ 162 (404)
T 1jfb_A 85 PTFVDMDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQK-GCANGPVDLVKEFALPVPSYIIYTLLGVPF 162 (404)
T ss_dssp CCGGGCCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHH-CSTTSCEEHHHHTTTHHHHHHHHHHHTCCG
T ss_pred CcccccCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCCccHHHHHHHHHHHHHHHHHcCCCH
Confidence 345566799999999998 999999999999999999999999999865 234568999999999999999999999987
Q ss_pred chhhhhhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCH
Q 048805 156 DEEEKNIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQ 235 (364)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 235 (364)
++.+........+........+..++...+.+++.++++++++.. ..|+++.|++...++ ..+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~ 227 (404)
T 1jfb_A 163 NDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVEP------------KDDIISKLCTEQVKP---GNIDK 227 (404)
T ss_dssp GGHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHTTTT---TSSCH
T ss_pred HHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHhCC------------CCcHHHHHHHhhccC---CCCCH
Confidence 643221000000000011234556677788888888888776531 568999999655333 36899
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCc
Q 048805 236 DNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPL 315 (364)
Q Consensus 236 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~ 315 (364)
+++..++..+++||+|||+++++|++++|++||++|+|++++ .+||+|||+|+||++|+++.
T Consensus 228 ~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~~------------------~~yl~a~i~E~lRl~p~~~~ 289 (404)
T 1jfb_A 228 SDAVQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKAN------------------PSLAPQFVEELCRYHTASAL 289 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHC------------------GGGHHHHHHHHHHHSCSCCS
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHhC------------------hHhHHHHHHHHHhhCCCccc
Confidence 999999999999999999999999999999999999999993 48999999999999999996
Q ss_pred CCcccccccccccceecCCCcEEEEeeeecccCCCCCCC------------ccccccccC
Q 048805 316 LLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------SQKISFQTG 363 (364)
Q Consensus 316 ~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------~~f~PFg~G 363 (364)
.++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 290 ~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeRf~~~~~~~~Fg~G 349 (404)
T 1jfb_A 290 AIKRTAKEDVMIGDKLVRANEGIIASNQSANRDEEVFENPDEFNMNRKWPPQDPLGFGFG 349 (404)
T ss_dssp CCEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCSSCCCTTCCG
T ss_pred cceeeeCCCeeECCEEECCCCEEEeCHHhhCCCchhCCChhhcCCCCCCCCCCCCCCCCC
Confidence 677999999999999999999999999999999999987 257899998
No 25
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=100.00 E-value=2.3e-49 Score=355.04 Aligned_cols=324 Identities=12% Similarity=0.090 Sum_probs=256.6
Q ss_pred CccccchhhcCCCCchHHHHHHHHhC-CeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYG-ALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.+++++|| |||++.++|.++|++++++.++.++. . ..|++.............+.+.++
T Consensus 9 P~lG~~~~~-~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~g~~~l~ 85 (417)
T 1izo_A 9 KSLDNSLTL-LKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFYD-T-DRFQRQNALPKRVQKSLFGVNAIQ 85 (417)
T ss_dssp CCTTHHHHH-HHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHTC-T-TTEECTTCSCHHHHTTTTCTTCGG
T ss_pred CccchHHHH-hhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHhc-c-cccccccccccchhhhhcccccee
Confidence 799999999 6789999999999998 89999999899999999999986543 3 345443322111100112334556
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhh
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEE 159 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~ 159 (364)
..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.|.. ++++|+.+.+..+++++++.+ ||.+.+..+
T Consensus 86 ~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~dl~~~~~~~~~~vi~~~-~G~~~~~~~ 158 (417)
T 1izo_A 86 GMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEK-----ADEVVLFEEAKEILCRVACYW-AGVPLKETE 158 (417)
T ss_dssp GCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTT-----SSEEEHHHHHHHHHHHHHHHH-HTCCCCTTT
T ss_pred ecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhc-----CCCeeHHHHHHHHHHHHHHHH-cCCCCCchH
Confidence 77799999999998 99999999999999999999999998853 468999999999999999998 599876532
Q ss_pred h-hh-----ccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCcccccc
Q 048805 160 K-NI-----GKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAEL 233 (364)
Q Consensus 160 ~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 233 (364)
. .+ .....+..+.+...+..++...+.+++.++|+++++.... .. ..|+++.|+.+...++ ..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~g--~~l 228 (417)
T 1izo_A 159 VKERADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLK---TT-----SGTALHEMAFHTQEDG--SQL 228 (417)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC---CC-----TTSHHHHHHHCBCTTS--CBC
T ss_pred HHHHHHHHHHHHhhcccCCccchhHHHHHHHHHHHHHHHHHHHHhhccC---CC-----cCCHHHHHHHhccccC--CCC
Confidence 1 00 0000000011123455677788899999999988765311 12 5689999998754332 357
Q ss_pred CHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCC
Q 048805 234 SQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPA 313 (364)
Q Consensus 234 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~ 313 (364)
+++++..++..++ ||++||+++++|++++|++||++|+|+++| ++|||+|||+|+||++|++
T Consensus 229 ~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~E-----------------~~~~l~a~i~E~lRl~p~~ 290 (417)
T 1izo_A 229 DSRMAAIELINVL-RPIVAISYFLVFSALALHEHPKYKEWLRSG-----------------NSREREMFVQEVRRYYPFG 290 (417)
T ss_dssp CHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTHHHHHHHTC-----------------CHHHHHHHHHHHHHHSCCC
T ss_pred CHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHhhCHHHHHHHHhc-----------------CCHHHHHHHHHHhhcCCcc
Confidence 8888777776654 999999999999999999999999999997 3799999999999999999
Q ss_pred CcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------------ccccccccC
Q 048805 314 PLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------------SQKISFQTG 363 (364)
Q Consensus 314 ~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------------~~f~PFg~G 363 (364)
+. .+|.+.+|++++|+.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 291 ~~-~~R~~~~d~~l~g~~ip~G~~v~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G 355 (417)
T 1izo_A 291 PF-LGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENLFDMIPQGGG 355 (417)
T ss_dssp CE-EEEEECSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCGGGGTTCCCCSSSCCTTCSS
T ss_pred cc-cceeecCCeeECCEEECCCCEEEecHHHhhcCccccCCccccChhhcCCCCCCCcceeCCCCC
Confidence 98 56999999999999999999999999999999999987 158999999
No 26
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=100.00 E-value=3.9e-49 Score=353.07 Aligned_cols=311 Identities=16% Similarity=0.189 Sum_probs=254.5
Q ss_pred CCCCchHHHHHHHHhCCeEEEEec-CccEEEecCHHHHHHHHhhCCccccCCCCCCcchhccc------CCcceeeccCC
Q 048805 11 GTLPHRSLKALSERYGALMFVYFG-NSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLY------ECRDIGFANYG 83 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~-~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 83 (364)
..+++.++.+|+++ ||||+++++ |.++|+|++++.+++++.++ .|++++.......... .....++..+|
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 104 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA 104 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCC
Confidence 57999999999998 999999986 68999999999999999875 5665432211111110 12334566679
Q ss_pred hhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhh
Q 048805 84 EYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNI 162 (364)
Q Consensus 84 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~ 162 (364)
+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.. .++++|+.+.+ ..++.++++.+ ||.+..+.+...
T Consensus 105 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~ 178 (417)
T 3tyw_A 105 PEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLA----AGGPVDLVSAYANAVSTSVICEL-LGIPRHDLEFFR 178 (417)
T ss_dssp HHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHH----HCSSEEHHHHTHHHHHHHHHHHH-HTCCTTTTTHHH
T ss_pred cHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh----hCCCcchHHHHHHHHHHHHHHHH-hCCCHHHHHHHH
Confidence 9999999998 99999999999999999999999999975 34579999988 57889999987 899887544311
Q ss_pred ccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHH
Q 048805 163 GKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAII 242 (364)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~ 242 (364)
.+...+........+..++...+.+++.++++++++.. ..|+++.|+....+++ .++++++..++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~~---~ls~~el~~~~ 243 (417)
T 3tyw_A 179 DVTRISGSRNSTAEQVSEALGGLFGLLGGLVAERREEP------------RDDLISKLVTDHLVPG---NVTTEQLLSTL 243 (417)
T ss_dssp HHHHHHHSSSSCTTHHHHHHHHHHHHHHHHHHHHHSSC------------CSSHHHHHHHHTTTTT---SSCHHHHHHHH
T ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCC------------CCCHHHHHHHhcccCC---CCCHHHHHHHH
Confidence 11111100011234567777888888998888876531 5799999998866543 69999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccc
Q 048805 243 LDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIA 322 (364)
Q Consensus 243 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~ 322 (364)
..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++..++|.+.
T Consensus 244 ~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~ 305 (417)
T 3tyw_A 244 GITINAGRETTTSMIALSTLLLLDRPELPAELRKDP------------------DLMPAAVDELLRVLSVADSIPLRVAA 305 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTHHHHHHHHCG------------------GGHHHHHHHHHHHHCSCTTCCEEEES
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh------------------HHHHHHHHHHHHhccccccCceeEeC
Confidence 999999999999999999999999999999999993 48999999999999999987779999
Q ss_pred ccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 323 ESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 323 ~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 306 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 356 (417)
T 3tyw_A 306 EDIELSGRTVPADDGVIALLAGANHDPEQFDDPERVDFHRTDNHHVAFGYG 356 (417)
T ss_dssp SCEECSSCEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCCCCCTTCCS
T ss_pred CCeEECCEEECCCCEEEEehhhhcCChhhcCCccccCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999987 468999998
No 27
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=100.00 E-value=2.8e-50 Score=369.00 Aligned_cols=331 Identities=13% Similarity=0.101 Sum_probs=243.2
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCc-cccCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDI-VTSNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++++ ..+++.++.+|+++||+||++++++.++|+|+||+.+++++.++.. .+...... ..... .+.+.+.
T Consensus 23 P~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~~-~~~~~--~g~~~~~ 98 (491)
T 3dax_A 23 PYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFA-TSAKA--FGHRSID 98 (491)
T ss_dssp SCTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHHH-HHHHH--HTCCCCC
T ss_pred cchhhHHHH-hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHHH-HHHHH--cCCCccc
Confidence 789999999 7789999999999999999999999999999999999999976531 22211110 00011 1334442
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhh--hcCCccccHHHHHHHHHHhHHHHHhhccCCch
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLC--FNKGRPLNLTEMLLTVSNNIVSRCVLGRKADE 157 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~ 157 (364)
..+++.|+++|+.+ .+.|+...++.+.+.+.+.+.+.++...... ...+..+++...+..+++++++.++||.....
T Consensus 99 ~~~g~~w~~~r~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~fG~~~~~ 177 (491)
T 3dax_A 99 PMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTR 177 (491)
T ss_dssp GGGTSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHC----------CCEEEEHHHHHHHHHHHHHHHHHHCBCSTT
T ss_pred ccchhHHHHHHHHH-HHhcCcccHHHHHHHHHHHHHHHHHhhccCCcCCCCceeccHHHHHHHHHHHHhHHHHcCccccc
Confidence 45588899999997 7788888888888888887777776543210 12335689999999999999999999988764
Q ss_pred hhh-------hhc-------ccccc-chhhh-hHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHH
Q 048805 158 EEK-------NIG-------KSNKF-DVLSG-LIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILL 221 (364)
Q Consensus 158 ~~~-------~~~-------~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (364)
.+. ... .++++ ..++. ..++..+..+.+.+. +++++.+. ... ..|+++.++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~-----~~d~l~~ll 244 (491)
T 3dax_A 178 RDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAES---LRHENLQK-----RES-----ISELISLRM 244 (491)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGSHHHHHHHHHHHHH---TSHHHHTT-----CBS-----CCHHHHHHH
T ss_pred ccchhhhhhHHHHHHHHHHHHhHHHHHhCCHhhhhHHHHHHHHHHHH---HHHHHhhc-----ccc-----hhHHHHHHH
Confidence 321 000 11111 01111 111222222222221 12222211 111 578999888
Q ss_pred hhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCC----------CCChh
Q 048805 222 QLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKL----------NINMK 291 (364)
Q Consensus 222 ~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~----------~~~~~ 291 (364)
+...+.+ .++++++.++++.+++||+|||+++++|++++|++||++|+|+|+||++++++++ .++.+
T Consensus 245 ~~~~~~~---~~~~~~i~~~~~~~~~ag~~tta~tl~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~~~~ 321 (491)
T 3dax_A 245 FLNDTLS---TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQA 321 (491)
T ss_dssp HHHHHHB---CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHTTTCCCCSSSCCCCCCHH
T ss_pred HHHHhcC---CChHHHHHHHHHHHHHHhccchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhhccccccccCCCccccCHH
Confidence 7654432 5789999999999999999999999999999999999999999999999987543 36999
Q ss_pred hcccchhHHHHHhhhccCCCCCCcCCcccccccccc----cceecCCCcEEEEeeeecccCCCCCCC
Q 048805 292 EIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKW----RGYDIPSKTRVIVNAYGQFKGIPKVGT 354 (364)
Q Consensus 292 ~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i----~g~~IpkGt~v~~~~~~~~~d~~~~~~ 354 (364)
++++||||+|||+||||++|+ +. ++|.+.+|+++ +||.|||||.|+++.+++||||++|++
T Consensus 322 ~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~l~~~~~g~~ip~Gt~v~~~~~~~~~d~~~~~d 386 (491)
T 3dax_A 322 ELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPD 386 (491)
T ss_dssp HHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEEETTEEEEECTTCEEEECTHHHHTCTTTSSS
T ss_pred HHhcCHHHHHHHHHHHhcCCC-cc-ceeEecCCeEeecCCCcEEeCCCCEEEechHhhcCCcccCCC
Confidence 999999999999999999985 55 56999999999 789999999999999999999999976
No 28
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=100.00 E-value=1.2e-50 Score=371.28 Aligned_cols=331 Identities=13% Similarity=0.105 Sum_probs=259.1
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCc-cccCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDI-VTSNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.+++++|||||++++++.++|+|++|+.+++++.+... .+..+........ .+.+.+.
T Consensus 23 PliG~~~~~-~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~~~~~~~---~g~~~~~ 98 (491)
T 3v8d_A 23 PYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHFALSAKA---FGHRSID 98 (491)
T ss_dssp SSTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHHHHHHHH---HTCCCCC
T ss_pred ceeccHHHH-hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHHHHHHHh---cCCcccc
Confidence 899999999 8999999999999999999999999999999999999999976531 2222111111111 1344444
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhc--CCccccHHHHHHHHHHhHHHHHhhccCCch
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFN--KGRPLNLTEMLLTVSNNIVSRCVLGRKADE 157 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~ 157 (364)
..+|+.|+++|+.+ .+.|++..++.+.+.+.+++.++++.+.....+ .+...++.+++..++.++++..+||.+...
T Consensus 99 ~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~fG~~~~~ 177 (491)
T 3v8d_A 99 PMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRVMFEAGYLTIFGRDLTR 177 (491)
T ss_dssp GGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHHHHHHHHHHHHCBCCSC
T ss_pred cccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHHHHHHHHHHHcCccccc
Confidence 55699999999987 899999999999999999999999855322111 356789999999999999999999998653
Q ss_pred hhh-------hhc-------ccccc-chh-hhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHH
Q 048805 158 EEK-------NIG-------KSNKF-DVL-SGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILL 221 (364)
Q Consensus 158 ~~~-------~~~-------~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (364)
.+. .+. .++.+ ..+ ....++..++.+.+.+++.+.+.+++ .. ..|+++.++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~a~~~l~~~~~~~~~~~~--------~~-----~~d~l~~l~ 244 (491)
T 3v8d_A 178 RDTQKAHILNNLDNFKQFDKVFPALVAGLPIHMFRTAHNAREKLAESLRHENLQKR--------ES-----ISELISLRM 244 (491)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCHHHHHHHHHHHHHTSHHHHTTC--------BS-----CCHHHHHHH
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcc--------cc-----ccHHHHHHH
Confidence 211 000 11111 001 12234455555555555544433221 11 678999998
Q ss_pred hhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCC----------CCCChh
Q 048805 222 QLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGK----------LNINMK 291 (364)
Q Consensus 222 ~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~----------~~~~~~ 291 (364)
....+.+ .+++++++.+++.+++||++||+++++|++++|++||++|+++|+||+++++++ ..++.+
T Consensus 245 ~~~~~~~---~~~~~ei~~~~~~~~~ag~~tt~~~l~~~l~~L~~~P~~~~~l~~Ei~~~~~~~~~~~~~~~~~~~~~~~ 321 (491)
T 3v8d_A 245 FLNDTLS---TFDDLEKAKTHLVVLWASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQA 321 (491)
T ss_dssp HHHHHHB---CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTTCCCCSSSSCCCCCHH
T ss_pred HHhhccC---CCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHhhccccccccccccccCCHH
Confidence 7765542 689999999999999999999999999999999999999999999999998653 357899
Q ss_pred hcccchhHHHHHhhhccCCCCCCcCCcccccccccc----cceecCCCcEEEEeeeecccCCCCCCC
Q 048805 292 EIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKW----RGYDIPSKTRVIVNAYGQFKGIPKVGT 354 (364)
Q Consensus 292 ~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i----~g~~IpkGt~v~~~~~~~~~d~~~~~~ 354 (364)
++++||||+|||+|+||++|+ +. .+|.+.+|+++ +||.||||+.|+++.+++||||++|++
T Consensus 322 ~l~~~~~l~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~~g~~ip~G~~v~~~~~~~~~d~~~~~~ 386 (491)
T 3v8d_A 322 ELNDLPVLDSIIKESLRLSSA-SL-NIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPD 386 (491)
T ss_dssp HHHCCHHHHHHHHHHHHHHEE-EC-EEEEESSSEEEECSSCEEEECTTCEEEECTHHHHTCTTTSSS
T ss_pred HHhcChHHHHHHHHHhhcCCC-Cc-cceeccCCeeEeecCCcEEeCCCCEEEecchhhcCCcccCCC
Confidence 999999999999999999984 44 45999999999 999999999999999999999999977
No 29
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=100.00 E-value=5.7e-49 Score=352.25 Aligned_cols=323 Identities=15% Similarity=0.111 Sum_probs=257.1
Q ss_pred CccccchhhcCCCCchHHHHHHHHh-CCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERY-GALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.+++++| ||||++.+++.+++++++++.++ ++.+. ..|++.+...........+.+.++
T Consensus 8 P~iG~~~~~-~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~g~~~l~ 84 (415)
T 3awm_A 8 KGPDETLSL-LADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLLGQGGVQ 84 (415)
T ss_dssp -CCCCHHHH-HHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTSCSSSGG
T ss_pred CccchHHHH-HhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhccCCccee
Confidence 799999999 678999999999999 79999999888999999999987 66544 456544322111100112334456
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhh
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEE 159 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~ 159 (364)
..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.|... +++|+.+.+..+++++++.+ ||.+....+
T Consensus 85 ~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~-----~~vdl~~~~~~~~~~vi~~~-~G~~~~~~~ 157 (415)
T 3awm_A 85 GLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTRK-----GEIVFYDELHEPLTRAVCAW-AGVPLPDDE 157 (415)
T ss_dssp GCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-----SEEEHHHHHHHHHHHHHHHH-HTCCCCGGG
T ss_pred ecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhccC-----CcEeHHHHHHHHHHHHHHHH-cCCCCCcch
Confidence 67799999999998 999999999999999999999999999753 58999999999999999998 799876532
Q ss_pred h-h----h-ccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCcccccc
Q 048805 160 K-N----I-GKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAEL 233 (364)
Q Consensus 160 ~-~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 233 (364)
. . + .....+..+.+...+..++...+.+++.++++++++.... .. ..|+++.|+.+...++ ..+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~---~~-----~~d~l~~ll~~~~~~g--~~~ 227 (415)
T 3awm_A 158 AGNRAGELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSIG---SG-----SGTAAYAIAWHRDRHD--DLL 227 (415)
T ss_dssp HHHHHHHHHHHHHSTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC---CC-----TTSHHHHHHHCBCTTS--CBC
T ss_pred HHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CC-----CCCHHHHHHhhhhccC--CCC
Confidence 1 0 0 0001111111233456677888899999999988765311 12 5689999998754332 358
Q ss_pred CHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCC
Q 048805 234 SQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPA 313 (364)
Q Consensus 234 ~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~ 313 (364)
+++++..++..++ ||++||+++++|++++|++||++|+++++| +|||+|||+|+||++|++
T Consensus 228 ~~~~~~~~~~~~~-ag~~tt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~l~a~i~E~lRl~p~~ 288 (415)
T 3awm_A 228 SPHVAAVELVNVL-RPTVAIAVYITFVAHALQTCSGIRAALVQQ------------------PDYAELFVQEVRRFYPFF 288 (415)
T ss_dssp CHHHHHHHHHHHH-HHHHTHHHHHHHHHHHHHHSTTHHHHHHHC------------------TTHHHHHHHHHHHHSCCS
T ss_pred CHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHhChHHHHHHHHH------------------HHHHHHHHHHHhhcCCCc
Confidence 8888887776655 999999999999999999999999999997 699999999999999999
Q ss_pred CcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------------ccccccccC
Q 048805 314 PLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------------SQKISFQTG 363 (364)
Q Consensus 314 ~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------------~~f~PFg~G 363 (364)
+. ++|.+.+|++++|+.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 289 ~~-~~R~~~~d~~l~G~~ip~G~~V~~~~~~~~rdp~~~~dp~~F~P~R~~~~~~~~~~~~~FG~G 353 (415)
T 3awm_A 289 PA-VVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQEFRPERFRAWDEDSFNFIPQGGG 353 (415)
T ss_dssp CE-EEEEESSCEEETTEEECTTCEEEEEHHHHHTCHHHHSSTTSCCGGGGGGCCCCSSSCCTTCCS
T ss_pred cc-cceeecCCeEECCEEECCCCEEEeCchhhcCCccccCCccccChhhcCCCCCCCCCccCCCCC
Confidence 98 56999999999999999999999999999999999977 158999999
No 30
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=100.00 E-value=1.2e-48 Score=349.25 Aligned_cols=310 Identities=17% Similarity=0.233 Sum_probs=249.5
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCCC-Ccchhcc--cCCcceeeccCChhH
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPKT-TPANILL--YECRDIGFANYGEYW 86 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~ 86 (364)
..+++.++.+| ++||||+++++ ++.+.|++++++.+++|+.++ .|++++.. ....... ..+.+ ++..+|+.|
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~-l~~~dg~~h 111 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGG-LLSMDPPEH 111 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCS-GGGCCTTHH
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCccccccc-CccCCchHH
Confidence 57899999999 89999999997 889999999999999999764 35554332 1111111 01233 456679999
Q ss_pred HHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhhhhhccc
Q 048805 87 RKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEEKNIGKS 165 (364)
Q Consensus 87 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~ 165 (364)
+++|+.+ .+.|+++.++.+.+.+.+.++++++.+... +.++|+.+.+. .+++++++. +||.+.++.+....+.
T Consensus 112 ~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~----~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~ 185 (417)
T 2y5n_A 112 SRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAAT----GQPADLVAMFARQLPVRVICE-LLGVPSADHDRFTRWS 185 (417)
T ss_dssp HHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHHH----CSSEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred HHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhC----CCCeeHHHHHHHHhHHHHHHH-HcCCCHHHHHHHHHHH
Confidence 9999998 899999999999999999999999999742 22799997764 699999998 6999876543311110
Q ss_pred cc-cchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHH
Q 048805 166 NK-FDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILD 244 (364)
Q Consensus 166 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ 244 (364)
.. +.......++..++...+.+++.++++++++.. .+|+++.|+++..++ ..++++++..++..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~~~~ 250 (417)
T 2y5n_A 186 GAFLSTAEVTAEEMQEAAEQAYAYMGDLIDRRRKEP------------TDDLVSALVQARDQQ---DSLSEQELLDLAIG 250 (417)
T ss_dssp HTTSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHH
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhhccC---CCCCHHHHHHHHHH
Confidence 00 000001124566777888889999988876531 568999999875432 36999999999999
Q ss_pred HHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCC-cCCcccccc
Q 048805 245 MFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAP-LLLPREIAE 323 (364)
Q Consensus 245 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~-~~~~R~~~~ 323 (364)
+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++ ..++|.+.+
T Consensus 251 l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~~R~~~~ 312 (417)
T 2y5n_A 251 LLVAGYESTTTQIADFVYLLMTRPELRRQLLDRP------------------ELIPSAVEELTRWVPLGVGTAFPRYAVE 312 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHCCCBSSCCSCEEESS
T ss_pred HHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHHhcCCccccccceEeCC
Confidence 9999999999999999999999999999999983 489999999999999999 456799999
Q ss_pred cccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 324 SLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 324 d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 313 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~lpFG~G 362 (417)
T 2y5n_A 313 DVTLRGVTIRAGEPVLASTGAANRDQAQFPDADRIDVDRTPNQHLGFGHG 362 (417)
T ss_dssp CEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSSCCCCTTCCS
T ss_pred CEEECCEEECCCCEEEeChhhhCCCcccCCCccccCCCCCCCCcCCCCCC
Confidence 9999999999999999999999999999987 358999998
No 31
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=100.00 E-value=1.1e-48 Score=349.52 Aligned_cols=311 Identities=16% Similarity=0.182 Sum_probs=249.2
Q ss_pred CCCCchHHHHHHHHh-CCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcc-----c-CCcceeeccC
Q 048805 11 GTLPHRSLKALSERY-GALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILL-----Y-ECRDIGFANY 82 (364)
Q Consensus 11 ~~~~~~~~~~~~~~y-G~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~ 82 (364)
..+++.++.+| ++| ||||++++ ++.++|+|++++.+++|+.++. +++++....+.... . ...+.++..+
T Consensus 23 ~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (412)
T 2zbx_A 23 PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPATSPRFEAVRESPQAFIGLD 99 (412)
T ss_dssp TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCCCSGGGC----CCCCGGGCC
T ss_pred ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccccccccccccccccccccCC
Confidence 67899999999 788 99999997 8899999999999999997642 44443211111110 0 0122355667
Q ss_pred ChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHH-HHHhHHHHHhhccCCchhhhh
Q 048805 83 GEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLT-VSNNIVSRCVLGRKADEEEKN 161 (364)
Q Consensus 83 ~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~-~~~~~~~~~~fG~~~~~~~~~ 161 (364)
|+.|+++|+.+ .+.|++..++.+.+.+.+.++.+++.+.. .++++|+.+.+.. ++.++++. +||.+.++.+..
T Consensus 100 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~ 173 (412)
T 2zbx_A 100 PPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLA----AGPTADLVSQFALPVPSMVICR-LLGVPYADHEFF 173 (412)
T ss_dssp TTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHH----HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHH
T ss_pred cHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHH
Confidence 99999999998 89999999999999999999999999974 3468999998874 88999996 799987643321
Q ss_pred hccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHH
Q 048805 162 IGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAI 241 (364)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~ 241 (364)
......+...... .+..++...+.+++.++++++++.. ..|+++.|+++..++ ..++++++..+
T Consensus 174 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~ls~~ei~~~ 237 (412)
T 2zbx_A 174 QDASKRLVQSTDA-QSALTARNDLAGYLDGLITQFQTEP------------GAGLVGALVADQLAN---GEIDREELIST 237 (412)
T ss_dssp HHHHHHHHHCSSH-HHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHTTTTT---TSSCHHHHHHH
T ss_pred HHHHHHHhccCcH-HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhcccC---CCCCHHHHHHH
Confidence 1110000000011 4566677788888888888776531 468999999876532 36999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccc
Q 048805 242 ILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREI 321 (364)
Q Consensus 242 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~ 321 (364)
+..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++..++|.+
T Consensus 238 ~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R~~ 299 (412)
T 2zbx_A 238 AMLLLIAGHETTASMTSLSVITLLDHPEQYAALRADR------------------SLVPGAVEELLRYLAIADIAGGRVA 299 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCCCGGGCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCh------------------HhHHHHHHHHHHhCCccccccceee
Confidence 9999999999999999999999999999999999983 4899999999999999997677999
Q ss_pred cccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccCC
Q 048805 322 AESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTGF 364 (364)
Q Consensus 322 ~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G~ 364 (364)
.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|-
T Consensus 300 ~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G~ 352 (412)
T 2zbx_A 300 TADIEVEGQLIRAGEGVIVVNSIANRDGTVYEDPDALDIHRSARHHLAFGFGV 352 (412)
T ss_dssp SSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCCTTCCTTCCST
T ss_pred CCCeEECCEEECCCCEEEeChhhhcCCccccCCccccCCCCCCCCccCCCCCC
Confidence 999999999999999999999999999999987 3689999983
No 32
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=100.00 E-value=6.9e-49 Score=350.10 Aligned_cols=309 Identities=15% Similarity=0.213 Sum_probs=247.2
Q ss_pred CCCCchHHHHHHHHhCCeEEEE----e-cC-ccEEEecCHHHHHHHH-hhCCccccCCCCCCcch-hcc--cCCcceeec
Q 048805 11 GTLPHRSLKALSERYGALMFVY----F-GN-SPTLVVSSAELAGEMF-KTHDIVTSNRPKTTPAN-ILL--YECRDIGFA 80 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~----~-~~-~~~vvi~~~~~i~~i~-~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~ 80 (364)
..+++.++.+| ++|||||+++ + ++ .++|+++||+.+++|+ .++ .+++++...... ... ....+.++.
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (406)
T 1ued_A 23 NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRPQFTQSKSGAHVEAQFVGQIST 99 (406)
T ss_dssp TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCCCC---------CGGGTTCGGG
T ss_pred CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--ccccccccccccccccccccccccccc
Confidence 67899999999 9999999999 6 78 8999999999999999 543 245444311110 111 001223456
Q ss_pred cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHH-HHHhHHHHHhhccCCchhh
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLT-VSNNIVSRCVLGRKADEEE 159 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~-~~~~~~~~~~fG~~~~~~~ 159 (364)
.+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+.+.+.. +++++++ .+||.+..+.+
T Consensus 100 ~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~-~~~G~~~~~~~ 173 (406)
T 1ued_A 100 YDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEA----EGPSADLQGLFADPVGAHALC-ELLGIPRDDQR 173 (406)
T ss_dssp CCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHH----HCTTEEHHHHTHHHHHHHHHH-HHHTCCHHHHH
T ss_pred CCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCeeHHHHHHHHhHHHHHH-HHcCCCHHHHH
Confidence 6799999999998 99999999999999999999999999974 3468999998875 9999999 57999865433
Q ss_pred hhhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHH
Q 048805 160 KNIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLK 239 (364)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~ 239 (364)
........+........+..++...+.+++.++++++++.. ..|+++.|++.. + ..++++++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~--~---~~ls~~ei~ 236 (406)
T 1ued_A 174 EFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRADP------------DDGLLGMIVRDH--G---DNVTDEELK 236 (406)
T ss_dssp HHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHH--G---GGSCHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhc--C---CCCCHHHHH
Confidence 21111000000011124566777888888999888876531 568999999875 2 368999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcc
Q 048805 240 AIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPR 319 (364)
Q Consensus 240 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R 319 (364)
.++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++..++|
T Consensus 237 ~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~~R 298 (406)
T 1ued_A 237 GLCTALILGGVETVAGMIGFGVLALLDNPGQIELLFESP------------------EKAERVVNELVRYLSPVQAPNPR 298 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTHHHHCH------------------HHHHHHHHHHHHHHCSSCSCSCE
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhChHHHHHHHhCH------------------HHHHHHHHHHHhcCCCcccCcce
Confidence 999999999999999999999999999999999999984 37999999999999999976679
Q ss_pred cccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 320 EIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 320 ~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 299 ~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~~pFG~G 352 (406)
T 1ued_A 299 LAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANRAAVSDVGFGHG 352 (406)
T ss_dssp EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCCCCCCTTCCS
T ss_pred ecCCCEEECCEEECCCCEEEecHHHhcCCchhCCChhhcCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999987 358899998
No 33
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=100.00 E-value=1.4e-48 Score=347.77 Aligned_cols=306 Identities=15% Similarity=0.193 Sum_probs=249.5
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCC--C-Ccchhccc--CCcceeeccCCh
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPK--T-TPANILLY--ECRDIGFANYGE 84 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~--~-~~~~~~~~--~~~~~~~~~~~~ 84 (364)
..+++.++.+| ++||||+++++ ++.++|++++++.+++++.++ .|++++. . ........ .+.+ ++..+|+
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~ 93 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGS-LLWQDEP 93 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTC-CTTCCTT
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccc-cccCCch
Confidence 57899999999 89999999997 889999999999999999864 4666532 1 11100111 1333 4566799
Q ss_pred hHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhhhhhc
Q 048805 85 YWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEEKNIG 163 (364)
Q Consensus 85 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~ 163 (364)
.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+...+. .+++++++. +||.+..+.+....
T Consensus 94 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~ 167 (403)
T 3aba_A 94 EHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEA----RGGPVDLVKTFANAVPSMVISD-LFGVPVERRAEFQD 167 (403)
T ss_dssp HHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHH----HCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHH
T ss_pred hHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHH
Confidence 999999998 99999999999999999999999999974 246799987664 799999997 79998765433111
Q ss_pred ----cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHH
Q 048805 164 ----KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLK 239 (364)
Q Consensus 164 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~ 239 (364)
...... + .++..++...+.+++.++++++++.. .+|+++.|+++..++ ..++++++.
T Consensus 168 ~~~~~~~~~~--~--p~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~l~~~ei~ 228 (403)
T 3aba_A 168 IAEAMMRVDQ--D--AAATEAAGMRLGGLLYQLVQERRANP------------GDDLISALITTEDPD---GVVDDMFLM 228 (403)
T ss_dssp HHHHHSBSSS--C--HHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHTSCCTT---CCCSHHHHH
T ss_pred HHHHHHhccC--c--HHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhccCC---CCCCHHHHH
Confidence 111110 0 14566777788888999988876531 468999999875432 369999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcc
Q 048805 240 AIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPR 319 (364)
Q Consensus 240 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R 319 (364)
.++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++..++|
T Consensus 229 ~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R 290 (403)
T 3aba_A 229 NAAGTLLIAAHDTTACMIGLGTALLLDSPDQLALLREDP------------------SLVGNAVEELLRYLTIGQFGGER 290 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCSCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHhcCCCcccccce
Confidence 999999999999999999999999999999999999983 48999999999999999966779
Q ss_pred cccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 320 EIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 320 ~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 291 ~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~l~FG~G 344 (403)
T 3aba_A 291 VATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLAFGFG 344 (403)
T ss_dssp EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCCCCCSTTCCG
T ss_pred EeCCCeEECCEEECCCCEEEechhhhCCChhhCCCccccCCCCCCCCccCCCCC
Confidence 99999999999999999999999999999999987 358999998
No 34
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=100.00 E-value=1.2e-48 Score=348.71 Aligned_cols=308 Identities=18% Similarity=0.236 Sum_probs=248.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcc---h-hccc-CCcceeeccCChh
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPA---N-ILLY-ECRDIGFANYGEY 85 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~ 85 (364)
..+++.++.+| ++|||||++++++.++|+|++++.+++++.++. |++++..... . .... .+.+ ++..+|+.
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g~~ 94 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPM-MILMDPPD 94 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCC-GGGCCTTH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccc-cccCCchH
Confidence 67899999999 899999999999999999999999999998653 7666432211 0 1111 2333 45667999
Q ss_pred HHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHH-HHHHHHhHHHHHhhccCCchhhhhhcc
Q 048805 86 WRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEM-LLTVSNNIVSRCVLGRKADEEEKNIGK 164 (364)
Q Consensus 86 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~~ 164 (364)
|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. ++++|+... ...+++++++.+ ||.+.++.+....+
T Consensus 95 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~ 167 (411)
T 3a4g_A 95 HTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPT-----DGPVDLMREYAFQIPVQVICEL-LGVPAEDRDDFSAW 167 (411)
T ss_dssp HHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCS-----SSCEEHHHHTTTTHHHHHHHHH-HTCCGGGHHHHHHH
T ss_pred HHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHhHHHHHHHH-hCCCHHHHHHHHHH
Confidence 99999998 99999999999999999999999998864 257999755 468999999975 99987643321110
Q ss_pred cccc-chhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHH
Q 048805 165 SNKF-DVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIIL 243 (364)
Q Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~ 243 (364)
...+ ...+ ..+..++...+.+++.++++++++.. ..|+++.|+++..++ +..++++++..++.
T Consensus 168 ~~~~~~~~p--~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~ 231 (411)
T 3a4g_A 168 SSVLVDDSP--ADDKNAAMGKLHGYLSDLLERKRTEP------------DDALLSSLLAVSDED--GDRLSQEELVAMAM 231 (411)
T ss_dssp HHHHTTSSC--TTTHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCCTT--CCCCCHHHHHHHHH
T ss_pred HHHHhccCC--HHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC--CCCCCHHHHHHHHH
Confidence 0000 0001 13456677788888888888876531 568999999875422 13699999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccccc
Q 048805 244 DMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAE 323 (364)
Q Consensus 244 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~ 323 (364)
.+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++..++|.+.+
T Consensus 232 ~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~R~~~~ 293 (411)
T 3a4g_A 232 LLLIAGHETTVNLIGNGVLALLTHPDQRKLLAEDP------------------SLISSAVEEFLRFDSPVSQAPIRFTAE 293 (411)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHTCSBCBCCCEEESS
T ss_pred HHHHhchhhHHHHHHHHHHHHHhCHHHHHHHhcCH------------------HHHHHHHHHHHHhcccccCCceeEeCC
Confidence 99999999999999999999999999999999983 489999999999999999667799999
Q ss_pred cccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 324 SLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 324 d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 294 d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 343 (411)
T 3a4g_A 294 DVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRLDITRDASGGVFFGHG 343 (411)
T ss_dssp CEEETTEEECTTCEEEEBHHHHTTCTTTSSSTTSCCTTSCCTTCCTTCCS
T ss_pred CEEECCEEECCCCEEEeChhhhCCChhhcCCccccCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999987 357899998
No 35
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=100.00 E-value=1.6e-48 Score=348.19 Aligned_cols=310 Identities=15% Similarity=0.195 Sum_probs=249.3
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCCCCcchh---c-cc-----CCcceeec
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANI---L-LY-----ECRDIGFA 80 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~---~-~~-----~~~~~~~~ 80 (364)
..+++.++.+|+ +||||+++++ ++.++|++++|+.+++++.++ .|++++....... . .. .+.+.++.
T Consensus 21 ~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (413)
T 2z36_A 21 PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG 97 (413)
T ss_dssp TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccc
Confidence 568999999997 7899999998 789999999999999999863 5666543211110 0 01 13442455
Q ss_pred cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhh
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEE 159 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~ 159 (364)
.+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... .++++|+...+. .++.++++.+ ||.+.++.+
T Consensus 98 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~---~~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~ 172 (413)
T 2z36_A 98 MDGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLAT---DQRPVDLVQALSLPVPSLVICEL-LGVPYTDHD 172 (413)
T ss_dssp CCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTC---SCSSEEHHHHTTTHHHHHHHHHH-HTCCGGGHH
T ss_pred cCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCccHHHHHhhhhHHHHHHHH-hCCCHHHHH
Confidence 6799999999998 999999999999999999999999998642 357899987665 6899999984 899876543
Q ss_pred hhhccccc-cchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHH
Q 048805 160 KNIGKSNK-FDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNL 238 (364)
Q Consensus 160 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i 238 (364)
....+... +..... ++..++...+.+++.++++++++.. .+|+++.|+++..++ ..++++++
T Consensus 173 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei 235 (413)
T 2z36_A 173 FFQSRTTMMVSRTSM--EDRRRAFAELRAYIDDLITRKESEP------------GDDLFSRQIARQRQE---GTLDHAGL 235 (413)
T ss_dssp HHHHHHHHTTCSSCH--HHHHHHHHHHHHHHHHHHHHHHSSC------------CSSHHHHHHHHHHHH---SCCCHHHH
T ss_pred HHHHHHHHHhcccCc--HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhcCC---CCCCHHHH
Confidence 31111000 000001 4566677788888888888776431 468999999875332 36999999
Q ss_pred HHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCc
Q 048805 239 KAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLP 318 (364)
Q Consensus 239 ~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~ 318 (364)
..++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++..++
T Consensus 236 ~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~ 297 (413)
T 2z36_A 236 VSLAFLLLTAGHETTANMISLGVVGLLSHPEQLTVVKANP------------------GRTPMAVEELLRYFTIADGVTS 297 (413)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCTTTTCEE
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HHHHHHHHHHHHhCCCccccee
Confidence 9999999999999999999999999999999999999993 4899999999999999996677
Q ss_pred ccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 319 REIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 319 R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 298 R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 352 (413)
T 2z36_A 298 RLATEDVEIGGVSIKAGEGVIVSMLSANWDPAVFKDPAVLDVERGARHHLAFGFG 352 (413)
T ss_dssp EEECSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCCCCCCTTCCS
T ss_pred eeeCCCEEECCEEECCCCEEEEChHhhcCChhhCCCccccCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999987 357899998
No 36
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=100.00 E-value=1.1e-48 Score=351.38 Aligned_cols=310 Identities=15% Similarity=0.167 Sum_probs=247.3
Q ss_pred CCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCC-CCcc---h-h-c---cc---CCccee
Q 048805 12 TLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPK-TTPA---N-I-L---LY---ECRDIG 78 (364)
Q Consensus 12 ~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~-~~~~---~-~-~---~~---~~~~~~ 78 (364)
.+++.++.++++ ||||+++++ |+.++|+|++++.+++++.+. ..|++++. .... . . + .. .....+
T Consensus 25 ~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~l 102 (428)
T 1cpt_A 25 EVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGSEILYDQNNEAFMRSISGGCPHVIDSL 102 (428)
T ss_dssp HHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHTTTSSCSSCCG
T ss_pred CCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccccccCCcccccchhcccccccccccccc
Confidence 458889998877 799999998 678999999999999999754 46777664 2221 1 1 1 10 012345
Q ss_pred eccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCch
Q 048805 79 FANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADE 157 (364)
Q Consensus 79 ~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~ 157 (364)
+..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.. .++++|+...+ ..+++++++.+ ||.+.+.
T Consensus 103 ~~~~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~ 176 (428)
T 1cpt_A 103 TSMDPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLD----FDGECDFMTDCALYYPLHVVMTA-LGVPEDD 176 (428)
T ss_dssp GGCCTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHT----SSSEEEHHHHTTTTHHHHHHHHH-HTCCGGG
T ss_pred ccCChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHH----hCCCeehHHHHHhhhHHHHHHHH-cCCCHhH
Confidence 566799999999998 99999999999999999999999999875 23579998554 67999999999 9998765
Q ss_pred hhhh-------hc-------cccccchh-hhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHh
Q 048805 158 EEKN-------IG-------KSNKFDVL-SGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQ 222 (364)
Q Consensus 158 ~~~~-------~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 222 (364)
.+.. +. .+|++..+ +...++..++...+.+++.++++++++. . ..|+++.|++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~-----~~dll~~ll~ 244 (428)
T 1cpt_A 177 EPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRSC-------P-----KDDVMSLLAN 244 (428)
T ss_dssp HHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTTS-------C-----CSSHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHcC-------C-----CCcHHHHHHh
Confidence 4321 10 01111111 0222456667778888888888877642 1 5689999998
Q ss_pred hhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHH
Q 048805 223 LRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCV 302 (364)
Q Consensus 223 ~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~ 302 (364)
+..++ ..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++ ||+||
T Consensus 245 ~~~~~---~~ls~~ei~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~ 303 (428)
T 1cpt_A 245 SKLDG---NYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAKSDPA------------------LIPRL 303 (428)
T ss_dssp CBSSS---SBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCGG------------------GHHHH
T ss_pred ccccC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHhHH------------------HHHHH
Confidence 75432 3699999999999999999999999999999999999999999999953 89999
Q ss_pred HhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 303 VKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 303 i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 304 i~E~lRl~p~~~~-~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 373 (428)
T 1cpt_A 304 VDEAVRWTAPVKS-FMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITRFPNRHLGFGWG 373 (428)
T ss_dssp HHHHHHHHCCBCC-CEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCSSTTSCCTTCCSCCCCTTCCS
T ss_pred HHHHHHhCCcccc-cceeeCCCeeECCEEECCCCEEEeCHHHhCCChhhCCChhhcCCCCCCCCCCCCCCC
Confidence 9999999999996 57999999999999999999999999999999999987 358999998
No 37
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=4.9e-49 Score=351.43 Aligned_cols=316 Identities=20% Similarity=0.268 Sum_probs=249.2
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCC--CCcchhccc-------CCcceeecc
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPK--TTPANILLY-------ECRDIGFAN 81 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~--~~~~~~~~~-------~~~~~~~~~ 81 (364)
..+++.++.+| ++||||+++++++.++|+++||+.+++|+.++. +++++. ......... .+.+.++..
T Consensus 14 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (408)
T 1odo_A 14 GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTA 90 (408)
T ss_dssp CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccccc
Confidence 67899999999 999999999998899999999999999997653 333321 110000000 012235667
Q ss_pred CChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhhh
Q 048805 82 YGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEEK 160 (364)
Q Consensus 82 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~~ 160 (364)
+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... ..++++|+.+.+. .+++++++. +||.+....+.
T Consensus 91 ~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~--~~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~ 166 (408)
T 1odo_A 91 YGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAEL--PAGEPVDLRQELAYPLPIAVIGH-LMGVPQDRRDG 166 (408)
T ss_dssp CHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHS--CTTSCEEHHHHTTTHHHHHHHHH-HHTCCHHHHHH
T ss_pred CChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCcchHHHHhhhhHHHHHHH-HhCCCHHHHHH
Confidence 799999999998 899999999999999999999999999753 2367899998887 599999996 79997654332
Q ss_pred hhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHH
Q 048805 161 NIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKA 240 (364)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~ 240 (364)
.......+........+..++...+.+++.++++++++.. ..|+++.|+++..++..+..++++++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~~~~~~l~~~ei~~ 234 (408)
T 1odo_A 167 FRALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRATP------------GDDMTSLLIAARDDEGDGDRLSPEELRD 234 (408)
T ss_dssp HHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHCC-----CCCHHHHHH
T ss_pred HHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhCC------------CCCHHHHHHHhcccccccCCCCHHHHHH
Confidence 1110000000001124556677788888999888876531 4689999998765421123699999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccc
Q 048805 241 IILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPRE 320 (364)
Q Consensus 241 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~ 320 (364)
++..+++||+|||+++++|++++|++||++|+|+++| .+||+|||+|+||++|+++..++|.
T Consensus 235 ~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~l~a~i~E~lRl~p~~~~~~~R~ 296 (408)
T 1odo_A 235 TLLLMISAGYETTVNVIDQAVHTLLTRPDQLALVRKG------------------EVTWADVVEETLRHEPAVKHLPLRY 296 (408)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHCHHHHHHHHHT------------------SSCHHHHHHHHHHHSCSBSCEEEEE
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHCHHHHHHHHhC------------------HHHHHHHHHHHHhhCCCccCCcceE
Confidence 9999999999999999999999999999999999998 3579999999999999999767799
Q ss_pred cccccccc-ceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 321 IAESLKWR-GYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 321 ~~~d~~i~-g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+.+|++++ ||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 297 ~~~d~~l~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~~pFG~G 350 (408)
T 1odo_A 297 AVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDATRTVKEHLAFGHG 350 (408)
T ss_dssp ESSCEECTTSCEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCSCCCCCTTCSS
T ss_pred eCCCeEcCCCcEECCCCEEEeChhhhcCChhhcCCccccCCCCCCCCCCCCCCC
Confidence 99999999 99999999999999999999999987 358899998
No 38
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.1e-48 Score=351.28 Aligned_cols=309 Identities=15% Similarity=0.169 Sum_probs=251.5
Q ss_pred CchHHHHHHHHhCCeE--EEE-ecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhccc------------CCccee
Q 048805 14 PHRSLKALSERYGALM--FVY-FGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLY------------ECRDIG 78 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~--~~~-~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 78 (364)
++.++.++ ++||||+ ++. +++.++++|++++++++++++. ..|+.++.......... .....+
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 88889988 6789999 888 7788999999999999999765 66777665433211100 012355
Q ss_pred eccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCch
Q 048805 79 FANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADE 157 (364)
Q Consensus 79 ~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~ 157 (364)
+..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+...+ ..+++++++.+ ||.+..+
T Consensus 125 ~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~~~~~dl~~~~~~~~~~~vi~~l-~G~~~~~ 198 (450)
T 3tkt_A 125 VQMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLG----AGEEGDFMALVAAPYPLHVVMQI-LGVPPED 198 (450)
T ss_dssp GGCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHH----TCSEEEHHHHTTTHHHHHHHHHH-TTCCGGG
T ss_pred ccCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCEeeHHHHHHHHHHHHHHHH-cCCChhH
Confidence 677799999999998 99999999999999999999999999975 25789998888 68999999985 8987765
Q ss_pred hhhhhc------------cccccch---hhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHh
Q 048805 158 EEKNIG------------KSNKFDV---LSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQ 222 (364)
Q Consensus 158 ~~~~~~------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 222 (364)
...... ..++..+ .....++..+....+.+++.++++++++.. .+|+++.|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~ 266 (450)
T 3tkt_A 199 EPKMLFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP------------TDDVATVIAN 266 (450)
T ss_dssp HHHHHHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHT
T ss_pred HHHHHHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHh
Confidence 433110 0111111 112345667777888889999998877542 5689999998
Q ss_pred hhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHH
Q 048805 223 LRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCV 302 (364)
Q Consensus 223 ~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~ 302 (364)
+..++ ..++++++..++..+++||+|||+++++|++++|++||++|+|+++| ++||+||
T Consensus 267 ~~~~~---~~ls~~ei~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E------------------~~~l~a~ 325 (450)
T 3tkt_A 267 AVVDG---EPMSDRDTAGYYIITASAGHDTTSASSAGAALALARDPDLFARVKAD------------------RNLLPGI 325 (450)
T ss_dssp CEETT---EECCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHH
T ss_pred ccccC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHC------------------HHHHHHH
Confidence 76543 36999999999999999999999999999999999999999999999 3689999
Q ss_pred HhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccCC
Q 048805 303 VKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTGF 364 (364)
Q Consensus 303 i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G~ 364 (364)
|+|+||++|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|++ ..++|||.|-
T Consensus 326 i~E~LRl~pp~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dP~~F~PeR~~~~~l~FG~G~ 396 (450)
T 3tkt_A 326 VEEAIRWTTPVQH-FMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFDPTRPANRHLAFGAGS 396 (450)
T ss_dssp HHHHHHHHCSBCE-EEEEESSSEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCTTCSSTTCCST
T ss_pred HHHHHHhCCCccC-cceeeCCCeeECCEEECCCCEEEEChHHhcCChhhCCCcCeeCCCCCCCCCCCCCCcC
Confidence 9999999999995 66999999999999999999999999999999999987 4689999983
No 39
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=100.00 E-value=5.4e-49 Score=351.18 Aligned_cols=309 Identities=14% Similarity=0.183 Sum_probs=246.4
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCCCCcchh---ccc---CCcceeeccCC
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANI---LLY---ECRDIGFANYG 83 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~ 83 (364)
..+++..+.+| ++||||+++++ ++.++|++++++.+++++.++. +++++....+.. ... ...+.++..+|
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 99 (408)
T 3abb_A 23 PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDD 99 (408)
T ss_dssp TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTCCT
T ss_pred ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccCCc
Confidence 67899999999 89999999998 8889999999999999997642 444432111110 110 01123455679
Q ss_pred hhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhhhhh
Q 048805 84 EYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEEKNI 162 (364)
Q Consensus 84 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~ 162 (364)
+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+.+.+. .++.++++. +||.+..+.+...
T Consensus 100 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~ 173 (408)
T 3abb_A 100 PVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLA----KGPGADLVSAFALPVPSVAICE-LLGVPYGDHDFFE 173 (408)
T ss_dssp THHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH----TCSCEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHH
T ss_pred hHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCeehHHHHHHHHHHHHHHH-HhCCCHHHHHHHH
Confidence 9999999998 99999999999999999999999999974 356899998886 488999997 7999876433211
Q ss_pred ccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHH
Q 048805 163 GKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAII 242 (364)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~ 242 (364)
.....+...... .+..++...+.+++.++++++++.. .+|+++.|+++..++ ..++++++..++
T Consensus 174 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~ls~~ei~~~~ 237 (408)
T 3abb_A 174 ECSRNFVGAATS-AEADAAFGELYTYLHGLVGRKQAEP------------EDGLLDELIARQLEE---GDLDHDEVVMIA 237 (408)
T ss_dssp HHHHHHC-------CCSSHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHHTS---SSCCHHHHHHHH
T ss_pred HHHHHHhcccch-HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhcccCC---CCCCHHHHHHHH
Confidence 110000000111 4455677788889999988876531 468999999876533 369999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccc
Q 048805 243 LDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIA 322 (364)
Q Consensus 243 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~ 322 (364)
..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++ .++|.+.
T Consensus 238 ~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~-~~~R~~~ 298 (408)
T 3abb_A 238 LVLLVAGHETTVNAIALGALTLIQHPEQIDVLLRDP------------------GAVSGVVEELLRFTSVSD-HIVRMAK 298 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGGGGGGSCH------------------HHHHHHHHHHHHHHCSSC-EEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HhHHHHHHHHHHhcCccc-ccceEeC
Confidence 999999999999999999999999999999999874 379999999999999999 5679999
Q ss_pred ccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 323 ESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 323 ~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 299 ~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~~~FG~G 349 (408)
T 3abb_A 299 EDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFDARRNARHHVGFGHG 349 (408)
T ss_dssp SCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTSCCTTCCTTCCG
T ss_pred CCeEECCEEECCCCEEEeChHHhcCCcccCCCcccCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999987 358999998
No 40
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=100.00 E-value=3.3e-48 Score=346.07 Aligned_cols=309 Identities=15% Similarity=0.233 Sum_probs=247.7
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcc---hhc-ccCCcceeeccCChhH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPA---NIL-LYECRDIGFANYGEYW 86 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~ 86 (364)
..+++.++.++ ++|||||++++++.++|++++++.+++++.++ ..|++++..... ... ...+. .++..+|+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQ-MMLFQNQPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHT-SGGGCCTTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhc-chhhcCCchH
Confidence 46889999988 58999999999999999999999999999876 567666542211 111 11122 3466679999
Q ss_pred HHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhhhhhccc
Q 048805 87 RKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEEKNIGKS 165 (364)
Q Consensus 87 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~~~ 165 (364)
+++|+.+ .+.|+++.++.+.+.+.+.++.+++.+.. ++.+|+...+. .++.++++. +||.+....+....+.
T Consensus 89 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~ 161 (404)
T 3ejb_B 89 RRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQG-----KKKMEVISDFAFPLASFVIAN-IIGVPEEDREQLKEWA 161 (404)
T ss_dssp HHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTT-----TSEEEHHHHTHHHHHHHHHHH-HHTCCGGGHHHHHHHH
T ss_pred HHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhh-----cCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHH
Confidence 9999998 99999999999999999999999998864 36789876554 588889888 4898876543311100
Q ss_pred ----ccc--chhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHH
Q 048805 166 ----NKF--DVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLK 239 (364)
Q Consensus 166 ----~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~ 239 (364)
..+ ........+..+....+.+++.++++++++.. ..|+++.|+ ...++ ..++++++.
T Consensus 162 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll-~~~~~---~~ls~~el~ 225 (404)
T 3ejb_B 162 ASLIQTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKRHP------------QQDMISMLL-KGREK---DKLTEEEAA 225 (404)
T ss_dssp HHHHGGGSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHH-HC-------CCCHHHHH
T ss_pred HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------cchHHHHHH-hcccC---CCCCHHHHH
Confidence 000 11112345667778888889999988876431 578999999 43332 379999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcc
Q 048805 240 AIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPR 319 (364)
Q Consensus 240 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R 319 (364)
.++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++. .+|
T Consensus 226 ~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~-~~R 286 (404)
T 3ejb_B 226 STCILLAIAGHETTVNLISNSVLCLLQHPEQLLKLRENP------------------DLIGTAVEECLRYESPTQM-TAR 286 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSBCE-EEE
T ss_pred HHHHHHHHcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHHhCCcccc-cce
Confidence 999999999999999999999999999999999999994 5899999999999999994 679
Q ss_pred cccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccCC
Q 048805 320 EIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTGF 364 (364)
Q Consensus 320 ~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G~ 364 (364)
.+.+|++++||.||||+.|+++.+++||||++|++ ..++|||.|-
T Consensus 287 ~~~~d~~~~g~~ip~Gt~v~~~~~~~~rdp~~~~dp~~F~p~R~~~~~~~Fg~G~ 341 (404)
T 3ejb_B 287 VASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVFDITRSPNPHLSFGHGH 341 (404)
T ss_dssp EESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCSSCCCCTTCCST
T ss_pred EeCCCeEECCEEECCCCEEEecHHHhCCChhhCCCcceeCCCCCCCCCCCCCCcC
Confidence 99999999999999999999999999999999987 4589999993
No 41
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=100.00 E-value=5.5e-48 Score=344.25 Aligned_cols=305 Identities=17% Similarity=0.233 Sum_probs=248.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCC--C----cch---hc-c----cCCcc
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKT--T----PAN---IL-L----YECRD 76 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~--~----~~~---~~-~----~~~~~ 76 (364)
..+++.++.+| ++|||||++++++.++|++++++.+++++.++ .|++++.. . ... .+ . ..+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 57899999999 99999999999999999999999999999865 56666542 1 110 11 0 01333
Q ss_pred eeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCC
Q 048805 77 IGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKA 155 (364)
Q Consensus 77 ~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~ 155 (364)
++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. ++++|+...+ ..+++++++. +||.+.
T Consensus 90 -l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~ 161 (404)
T 1z8o_A 90 -MGTSDPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGD-----SGVVDIVDRFAHPLPIKVICE-LLGVDE 161 (404)
T ss_dssp -GGGCCTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCS-----SSEEEHHHHTTTHHHHHHHHH-HTTCCG
T ss_pred -cccCCCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhh-----cCCcchHHHHhHHHHHHHHHH-HhCCCH
Confidence 4556799999999998 99999999999999999999999998752 4689998765 6899999998 599977
Q ss_pred chhhhhhc----cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhh-hhcCccc
Q 048805 156 DEEEKNIG----KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQL-RKDGMLV 230 (364)
Q Consensus 156 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~~~~ 230 (364)
++.+.... ... .. .+. .++..++...+.+++.+.++++++.. ..|+++.|++. ..++
T Consensus 162 ~~~~~~~~~~~~~~~-~~-~p~-~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~~--- 223 (404)
T 1z8o_A 162 KYRGEFGRWSSEILV-MD-PER-AEQRGQAAREVVNFILDLVERRRTEP------------GDDLLSALIRVQDDDD--- 223 (404)
T ss_dssp GGTTTHHHHHHHHHC-CC-GGG-HHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCEETTT---
T ss_pred HHHHHHHHHHHHHhc-cC-Chh-HHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhhcccC---
Confidence 64332111 111 10 011 45566777888888898888876531 56899999987 4322
Q ss_pred cccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCC
Q 048805 231 AELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLH 310 (364)
Q Consensus 231 ~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~ 310 (364)
..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++
T Consensus 224 ~~l~~~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~ 285 (404)
T 1z8o_A 224 GRLSADELTSIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDP------------------SALPNAVEEILRYI 285 (404)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HhHHHHHHHHHHhc
Confidence 369999999999999999999999999999999999999999999983 48999999999999
Q ss_pred CCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 311 PPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 311 p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|+++ .++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 286 p~~~-~~~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd~~~~~dP~~F~PeR~~~~~~~FG~G 347 (404)
T 1z8o_A 286 APPE-TTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQFPDPHRFDVTRDTRGHLSFGQG 347 (404)
T ss_dssp CSSC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTSCCTTCCTTCSS
T ss_pred CCcc-CcceEECCCEEECCEEECCCCEEEecchhhcCCcccCCChhhcCCCCCCCCccCCCCC
Confidence 9999 567999999999999999999999999999999999987 358999998
No 42
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=100.00 E-value=8.3e-49 Score=349.01 Aligned_cols=308 Identities=16% Similarity=0.133 Sum_probs=250.5
Q ss_pred CCCCchHHHHHHHHh--CCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHH
Q 048805 11 GTLPHRSLKALSERY--GALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRK 88 (364)
Q Consensus 11 ~~~~~~~~~~~~~~y--G~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (364)
..+++.++.+|+++| |||+++.+++ +.++|++++.+++++. +...|++++........ ..+...++..+|+.|++
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~ 94 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYET-GEFELMMAGQDDPVHKK 94 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCC-cccccCcccCCchHHHH
Confidence 578999999999999 9999999885 6999999999999995 44577766654332221 12233456677999999
Q ss_pred HHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhccccc
Q 048805 89 VRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIGKSNK 167 (364)
Q Consensus 89 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~~~~~ 167 (364)
+|+.+ .+.|++..++.+.+.+.+.++++++.+... +.+|+...+ ..+++++++. +||.+.+..+....+...
T Consensus 95 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~~~~~~ 167 (398)
T 4fb2_A 95 YRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIEL-----GEGDAATWLANEIPARLTAI-LLGLPPEDGDTYRRWVWA 167 (398)
T ss_dssp HHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTTT-----TEEEHCCCCCTTHHHHHHHH-HTTSCGGGHHHHHHHHHH
T ss_pred HHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhc-----CCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH
Confidence 99998 999999999999999999999999988643 468876555 6899999998 689887654431111110
Q ss_pred cchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHHHHH
Q 048805 168 FDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILDMFV 247 (364)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 247 (364)
+.. +....+..++...+.+++.++++++++.. ..|+++.|+++..++ ..++++++..++..+++
T Consensus 168 ~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~l~~ 231 (398)
T 4fb2_A 168 ITH-VENPEEGAEIFAELVAHARTLIAERRTNP------------GNDIMSRVIMSKIDG---ESLSEDDLIGFFTILLL 231 (398)
T ss_dssp HHH-CCCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHHHHCCC
T ss_pred Hhc-CCCHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHcccCC---CCCCHHHHHHHHHHHHH
Confidence 000 01123567778888899999998887631 678999999876543 36999999999999999
Q ss_pred hcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccccccccc
Q 048805 248 AGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKW 327 (364)
Q Consensus 248 ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i 327 (364)
||+|||+++++|++++|++||++|+|+++|+ .|++|||+|+||++|+++ ++|.+.+|+++
T Consensus 232 AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~--~~R~~~~d~~l 291 (398)
T 4fb2_A 232 GGIDNTARFLSSVFWRLAWDIELRRRLIAHP------------------ELIPNAVDELLRFYGPAM--VGRLVTQEVTV 291 (398)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHHCCBC--EEEEECSCEEE
T ss_pred HhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHHhCCCcC--CCeeeCCCEEE
Confidence 9999999999999999999999999999994 478999999999999999 56999999999
Q ss_pred cceecCCCcEEEEeeeecccCCCCCCC----------ccccccccCC
Q 048805 328 RGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTGF 364 (364)
Q Consensus 328 ~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G~ 364 (364)
+||.||||+.|+++.+++||||++|++ ..|+|||.|-
T Consensus 292 ~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~~~FG~G~ 338 (398)
T 4fb2_A 292 GDITMKPGQTAMLWFPIASRDRSAFDSPDNIVIERTPNRHLSLGHGI 338 (398)
T ss_dssp TTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCCSCCCCTTCCST
T ss_pred CCEEECCCCEEEechHhhcCChhhCCCcCeeCCCCCCCCCCCCCCCC
Confidence 999999999999999999999999987 4689999983
No 43
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=100.00 E-value=6.7e-48 Score=341.79 Aligned_cols=310 Identities=14% Similarity=0.151 Sum_probs=252.7
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecC----ccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGN----SPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYW 86 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~----~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (364)
..+++.++.+| ++||||+++++++ .++|+|+||+.++++++ +...|++++........ ..+.+.++..+|+.|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~-~~~~~~~~~~~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADR-ALLPGILQAYDPPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC------CCCTTCGGGCCTTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccc-cccccccccCCChhH
Confidence 57999999999 5999999999886 89999999999999995 44678777654432221 123456677789999
Q ss_pred HHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhhhhcccc
Q 048805 87 RKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEKNIGKSN 166 (364)
Q Consensus 87 ~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~ 166 (364)
+++|+.+ .+.|+++.++.+.+.+.+.++++++.+.. .++++|+.+.+...+...+...+||.+.++.+....+..
T Consensus 88 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~ 162 (384)
T 3oo3_A 88 TRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFES----VGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMIR 162 (384)
T ss_dssp HHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH----SCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHH
T ss_pred HHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 9999998 99999999999999999999999999964 457899999999988888888899998765443211111
Q ss_pred ccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHHHH
Q 048805 167 KFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILDMF 246 (364)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 246 (364)
.+.. .....+..+....+.+++.++++++++.. ..|+++.|++.. + ..++++++..++..++
T Consensus 163 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~~d~l~~ll~~~--~---~~l~~~~l~~~~~~~~ 224 (384)
T 3oo3_A 163 ESRE-SRLPRQRTLSGLGIVNYTKRLTSGKRRDP------------GDGMIGVIVREH--G---AEISDEELAGLAEGNL 224 (384)
T ss_dssp HHHH-CSCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHH--G---GGSCHHHHHHHHHHHH
T ss_pred HHhc-cCChHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhc--C---CCCCHHHHHHHHHHHH
Confidence 0000 12335566777888889999988776431 568999999872 1 3799999999999999
Q ss_pred HhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccccccc
Q 048805 247 VAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLK 326 (364)
Q Consensus 247 ~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~ 326 (364)
+||+|||+++++|++++|++||++|+|+++|++. |+|||+|+||++|+++..++|.+.+|++
T Consensus 225 ~AG~~Tta~~l~~~l~~L~~~P~~~~~l~~E~~~------------------l~a~i~E~lRl~p~~~~~~~R~~~~d~~ 286 (384)
T 3oo3_A 225 IMAAEQMAAQLAVAVLLLVTHPDQMALLREKPEL------------------IDSATEEVLRHASIVEAPAPRVALADVR 286 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSHHHHHHHHHCGGG------------------HHHHHHHHHHHHCSCSCCSCEEESSCEE
T ss_pred HhhHHHHHHHHHHHHHHHHHCHHHHHHHHhCHHH------------------HHHHHHHHHHhCCcccCCcceeeCCCEE
Confidence 9999999999999999999999999999999753 8999999999999999877799999999
Q ss_pred ccceecCCCcEEEEeeeeccc-CCCCCCC----ccccccccCC
Q 048805 327 WRGYDIPSKTRVIVNAYGQFK-GIPKVGT----SQKISFQTGF 364 (364)
Q Consensus 327 i~g~~IpkGt~v~~~~~~~~~-d~~~~~~----~~f~PFg~G~ 364 (364)
++||.||||+.|+++.+++|| ||+.|.. ..|+|||.|-
T Consensus 287 ~~g~~Ip~Gt~V~~~~~~~~r~dp~~F~PeR~~~~~~~FG~G~ 329 (384)
T 3oo3_A 287 MAGRDIHAGDVLTCSMLATNRAPGDRFDITREKATHMAFGHGI 329 (384)
T ss_dssp ETTEEECTTCEEEECHHHHHCCTTCCCCTTCSCCCCCTTCCST
T ss_pred ECCEEECCCCEEEEehhhcCCCCcceeCCCCCCCCcCCCCCCC
Confidence 999999999999999999998 6666654 6799999993
No 44
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.1e-48 Score=344.49 Aligned_cols=301 Identities=13% Similarity=0.140 Sum_probs=247.3
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHHH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKVR 90 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 90 (364)
..+++.++.++++ |||||++. .++|+|++++.+++++.++ ..|++++... .... .+ ..++..+|+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~-~~l~~~~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--AL-PMMIDMDDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CC-SSGGGCCTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-Cccc--cc-ccccccCchHHHHHH
Confidence 4688999999988 99999664 3799999999999999765 3677665432 1111 22 334556799999999
Q ss_pred HHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHH-HHHHHHHhHHHHHhhccCCchhhhhhc------
Q 048805 91 KICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTE-MLLTVSNNIVSRCVLGRKADEEEKNIG------ 163 (364)
Q Consensus 91 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~-~~~~~~~~~~~~~~fG~~~~~~~~~~~------ 163 (364)
+.+ .+.|++..++.+.+.+.+.++++++.+... +.+|+.. ....+++++++.+ ||.+.++.+....
T Consensus 88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~ 160 (398)
T 2xkr_A 88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCER-----GECDFVRDLAAPLPMAVIGDM-LGVRPEQRDMFLRWSDDLV 160 (398)
T ss_dssp HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTTT-----SEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHH
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhhc-----CCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHH
Confidence 998 999999999999999999999999988642 4799994 4568999999998 9998765433111
Q ss_pred --cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHH
Q 048805 164 --KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAI 241 (364)
Q Consensus 164 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~ 241 (364)
..+. +++...++..++...+.+++.++++++++.. ..|+++.|++...++ ..++++++..+
T Consensus 161 ~~~~~~--~~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ls~~ei~~~ 223 (398)
T 2xkr_A 161 TFLSSH--VSQEDFQITMDAFAAYNDFTRATIAARRADP------------TDDLVSVLVSSEVDG---ERLSDDELVME 223 (398)
T ss_dssp HHHTSC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHH
T ss_pred hccCcc--cchhhHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC---CCCCHHHHHHH
Confidence 1111 1123345666777888889999998876521 568999999876532 36999999999
Q ss_pred HHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccc
Q 048805 242 ILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREI 321 (364)
Q Consensus 242 ~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~ 321 (364)
+..+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|+||++|+++. ++|.+
T Consensus 224 ~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~ 284 (398)
T 2xkr_A 224 TLLILIGGDETTRHTLSGGTEQLLRNRDQWDLLQRDPS------------------LLPGAIEEMLRWTAPVKN-MCRVL 284 (398)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHSHHHHHHHHHCGG------------------GHHHHHHHHHHHHCSBCE-EEEEE
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHhhcccccC-cceEE
Confidence 99999999999999999999999999999999999953 899999999999999998 67999
Q ss_pred cccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 322 AESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 322 ~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 285 ~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 336 (398)
T 2xkr_A 285 TADTEFHGTALCAGEKMMLLFESANFDEAVFCEPEKFDVQRNPNSHLAFGFG 336 (398)
T ss_dssp SSCEEETTEEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCSSCCCCTTCCS
T ss_pred CCCeeECCEEECCCCEEEeChhhhcCChhhCCCCCeeCCCCCCCCCCcCCCC
Confidence 999999999999999999999999999999987 358999998
No 45
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=100.00 E-value=9.8e-48 Score=344.34 Aligned_cols=308 Identities=17% Similarity=0.184 Sum_probs=242.0
Q ss_pred CCCCchHHHHHHHHhCCeEEEEec--CccEEEecCHHHHHHHHhhCCccccCCCCC--------Ccc-h----hc-ccCC
Q 048805 11 GTLPHRSLKALSERYGALMFVYFG--NSPTLVVSSAELAGEMFKTHDIVTSNRPKT--------TPA-N----IL-LYEC 74 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~--~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~--------~~~-~----~~-~~~~ 74 (364)
..+++.++.++++ ||||+++++| +.++|+|++++.+++++.++ .|++++.. ... . .. ...+
T Consensus 19 ~~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 4678999999865 9999999987 78899999999999999864 67766531 000 0 00 0112
Q ss_pred cceeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhcc
Q 048805 75 RDIGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGR 153 (364)
Q Consensus 75 ~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~ 153 (364)
.+ ++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... +++|+...+ ..+++++++.+ ||.
T Consensus 96 ~~-l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----g~~dl~~~~~~~~~~~vi~~~-~G~ 167 (425)
T 2z3t_A 96 NW-LVFLDPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRAQ-----RRPDLVEGFAAPLPILVISAL-LGI 167 (425)
T ss_dssp TC-GGGCCHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTS-----SSCBHHHHTTTHHHHHHHHHH-HTC
T ss_pred cc-cccCCchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHH-hCC
Confidence 33 4455699999999998 999999999999999999999999998642 379998755 78999999998 999
Q ss_pred CCchhhhh-------hccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhc
Q 048805 154 KADEEEKN-------IGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKD 226 (364)
Q Consensus 154 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 226 (364)
+.++.+.. .....++...+...++..++...+.+++.++++++++. . ..|+++.|++...+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~-----~~dll~~ll~~~~~ 235 (425)
T 2z3t_A 168 PEEDHTWLRANAVALQEASTTRARDGRGYARAEAASQEFTRYFRREVDRRGGD-------D-----RDDLLTLLVRARDT 235 (425)
T ss_dssp CGGGHHHHHHHHHHHHTTCTTCCC---HHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------C-----CCCHHHHHHHhhcc
Confidence 87643321 11111111111123455666677777777777655432 1 56899999987654
Q ss_pred CccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhh
Q 048805 227 GMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKET 306 (364)
Q Consensus 227 ~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~ 306 (364)
+ ..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+
T Consensus 236 ~---~~ls~~el~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~ 294 (425)
T 2z3t_A 236 G---SPLSVDGIVGTCVHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTP------------------ESTPAAVEEL 294 (425)
T ss_dssp T---CCCCHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHH
T ss_pred C---CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCh------------------HhHHHHHHHH
Confidence 3 368999999999999999999999999999999999999999999994 4899999999
Q ss_pred ccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 307 LRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 307 lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 295 lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 360 (425)
T 2z3t_A 295 MRYDPPVQ-AVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPDPDVLDVHRAAERQVGFGLG 360 (425)
T ss_dssp HHHSCSBC-EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCSSCCCTTCCS
T ss_pred HHhCCccc-CcceEeCCCeeECCEEECCCCEEEeChhhhCCCccccCCcccCCCCCCCCCCCCCCCC
Confidence 99999999 567999999999999999999999999999999999987 357899998
No 46
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=100.00 E-value=9.3e-48 Score=345.33 Aligned_cols=309 Identities=14% Similarity=0.192 Sum_probs=252.2
Q ss_pred CCCchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHhhCCccccCCCCC--C-cchhcccCCcceeecc
Q 048805 12 TLPHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFKTHDIVTSNRPKT--T-PANILLYECRDIGFAN 81 (364)
Q Consensus 12 ~~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 81 (364)
.+++.++.+|+ +|||||++.++ +.++|+|++|+.+++++.++ ..|++++.. . ....+...+.+ ++..
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~-l~~~ 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGS-MIVL 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHG-GGGC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccc-cccC
Confidence 46788999996 69999999986 67899999999999999875 467776532 1 11111111233 3455
Q ss_pred CChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhh
Q 048805 82 YGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEK 160 (364)
Q Consensus 82 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~ 160 (364)
+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... .++.++|+.+.+ ..+++++++.+ ||.+.+..+.
T Consensus 121 dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~--~~~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~~~~ 196 (435)
T 2wm5_A 121 DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIAN--NPDRQADLVSELAGPLPLQIICDM-MGIPKADHQR 196 (435)
T ss_dssp CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHH
T ss_pred CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCcEehHHHHHHHHHHHHHHHH-cCCCHHHHHH
Confidence 799999999998 999999999999999999999999999864 234589999766 78999999999 9998865433
Q ss_pred hhc--------cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccc
Q 048805 161 NIG--------KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAE 232 (364)
Q Consensus 161 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~ 232 (364)
... ..|++. ...++..++...+.+++.++++++++.. ..|+++.|++...++ ..
T Consensus 197 ~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~ 258 (435)
T 2wm5_A 197 IFHWTNVILGFGDPDLA---TDFDEFMQVSADIGAYATALAEDRRVNH------------HDDLTSSLVEAEVDG---ER 258 (435)
T ss_dssp HHHHHHHHHHTTCTTSC---CCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BC
T ss_pred HHHHHHHHhccCCcchh---hhHHHHHHHHHHHHHHHHHHHHHHhcCC------------CCCHHHHHHhhhccC---CC
Confidence 111 112111 1234667777888899999998877531 568999999875432 36
Q ss_pred cCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCC
Q 048805 233 LSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPP 312 (364)
Q Consensus 233 ~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~ 312 (364)
++++++..++..+++||+|||+++++|++++|++||++|+|+++|++ +||+|||+|+||++|+
T Consensus 259 ls~~ei~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~-----------------~~l~a~i~E~lRl~p~ 321 (435)
T 2wm5_A 259 LSSREIASFFILLVVAGNETTRNAITHGVLALSRYPEQRDRWWSDFD-----------------GLAPTAVEEIVRWASP 321 (435)
T ss_dssp CCHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHSHH-----------------HHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCHHHHHHHhChH-----------------hHHHHHHHHHHhhcCc
Confidence 99999999999999999999999999999999999999999999965 4899999999999999
Q ss_pred CCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------cccccccc-C
Q 048805 313 APLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQT-G 363 (364)
Q Consensus 313 ~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~-G 363 (364)
++ .++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||. |
T Consensus 322 ~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~lpFG~~G 382 (435)
T 2wm5_A 322 VV-YMRRTLTQDIELRGTKMAAGDKVSLWYCSANRDESKFADPWTFDLARNPNPHLGFGGGG 382 (435)
T ss_dssp BC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTCCCTTCCSCCCCTTCSSS
T ss_pred cc-CcceEeCCCeeECCEEECCCCEEEeCHHHhcCCcccCcCCCccCCCCCCCCCCCCCCCC
Confidence 99 567999999999999999999999999999999999987 35889999 8
No 47
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=100.00 E-value=2.7e-47 Score=338.81 Aligned_cols=303 Identities=16% Similarity=0.213 Sum_probs=244.2
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCCCCc-chhcccCCcce-eeccCC----
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTP-ANILLYECRDI-GFANYG---- 83 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~---- 83 (364)
..+++.++.+| ++||||+++++ ++.++|+|++|+.+++|+.++ .|++++.... ..... .+.+. ++..+|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~~g~~~~ 100 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLISDADAES 100 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCBCSCHHH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceeeCCCCCC
Confidence 56899999999 89999999997 789999999999999999764 3655543321 11111 12331 455678
Q ss_pred --hhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhh
Q 048805 84 --EYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEK 160 (364)
Q Consensus 84 --~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~ 160 (364)
+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+...+ ..+++++++. +||.+..+.+.
T Consensus 101 ~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~----~g~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~ 174 (404)
T 2xbk_A 101 GRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIA----QGPPGDLHGELTVPFALTVLCE-VIGVPPQRRAE 174 (404)
T ss_dssp HHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH----TCSSEEHHHHTHHHHHHHHHHH-HHTCCGGGHHH
T ss_pred CCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCeeHHHHHHHHHHHHHHHH-HhCCCHHHHHH
Confidence 9999999998 99999999999999999999999999974 45689998766 4699999997 79998764432
Q ss_pred hhcccccc-chhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHH
Q 048805 161 NIGKSNKF-DVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLK 239 (364)
Q Consensus 161 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~ 239 (364)
...+...+ ..... .+..++...+.+++.++++++++.. .+|+++.| + + + .++++++.
T Consensus 175 ~~~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~l-~----~--~-~ls~~ei~ 232 (404)
T 2xbk_A 175 LTTLLAGIAKLDDR--EGAVRAQDDLFGYVAGLVEHKRAEP------------GPDIISRL-N----D--G-ELTEDRVA 232 (404)
T ss_dssp HHHHHHHHTBSSCH--HHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHH-H----S--S-SCCHHHHH
T ss_pred HHHHHHHHHhccCc--HHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHh-h----c--C-CCCHHHHH
Confidence 11100000 00000 1566677788888888888876531 45899888 2 1 1 68999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCC-cCCc
Q 048805 240 AIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAP-LLLP 318 (364)
Q Consensus 240 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~-~~~~ 318 (364)
.++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++ ..++
T Consensus 233 ~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~~ 294 (404)
T 2xbk_A 233 HLAMGLLFAGLDSVASIMDNGVVLLAAHPDQRAAALADP------------------DVMARAVEEVLRTARAGGSVLPP 294 (404)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHCHHHHHHHHHCH------------------HHHHHHHHHHHHHSCSSCCBCSC
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHHhCCCccccccc
Confidence 999999999999999999999999999999999999995 379999999999999999 4567
Q ss_pred ccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 319 REIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 319 R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 295 R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~lpFG~G 349 (404)
T 2xbk_A 295 RYASEDMEFGGVTIRAGDLVLFDLGLPNFDERAFTGPEEFDAARTPNPHLTFGHG 349 (404)
T ss_dssp EEESSCEEETTEEECTTCEEECBTHHHHTCTTTSSSTTSCCTTCSSCCCCTTEET
T ss_pred eeECCCeeECCEEECCCCEEEeChHHhcCChhhCCCccccCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999987 367899998
No 48
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=100.00 E-value=5.7e-48 Score=345.59 Aligned_cols=308 Identities=17% Similarity=0.211 Sum_probs=247.2
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCC---C-Cc-c---hhcccCCcceeeccC
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPK---T-TP-A---NILLYECRDIGFANY 82 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~---~-~~-~---~~~~~~~~~~~~~~~ 82 (364)
..+++.++.+| ++||||++ + ++.++|++++++.+++++.++. |++++. . .. . ..+.......++..+
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP 99 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC
Confidence 57899999999 78999999 5 7789999999999999998763 776652 0 10 0 111000022344567
Q ss_pred ChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHH-HHHHHHhHHHHHhhccCCchhhhh
Q 048805 83 GEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEM-LLTVSNNIVSRCVLGRKADEEEKN 161 (364)
Q Consensus 83 ~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~-~~~~~~~~~~~~~fG~~~~~~~~~ 161 (364)
|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... +++|+... ...+++++++.+ ||.+.+..+..
T Consensus 100 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~ 172 (419)
T 1q5d_A 100 PEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSGQ-----EEFDVVRDYAEGIPMRAISAL-LKVPAECDEKF 172 (419)
T ss_dssp HHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTTS-----SCEETTTTTGGGSHHHHHHHH-TTCCGGGHHHH
T ss_pred chHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHH-hCCCHHHHHHH
Confidence 99999999998 999999999999999999999999998642 47998864 489999999998 99987654321
Q ss_pred hc--------ccc-ccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcc-cHHHHHHhhhhcCcccc
Q 048805 162 IG--------KSN-KFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKK-DFVDILLQLRKDGMLVA 231 (364)
Q Consensus 162 ~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~l~~l~~~~~~~~~~~ 231 (364)
.. ..+ ++.......++..+....+.+++.++++++++.. .. |+++.|+++..++ .
T Consensus 173 ~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~~dll~~ll~~~~~~---~ 237 (419)
T 1q5d_A 173 RRFGSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRNP------------LENDVLTMLLQAEADG---S 237 (419)
T ss_dssp HHHHHHHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSCHHHHHHHHHHSS---T
T ss_pred HHHHHHHHHhcccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCCHHHHHHhhhccC---C
Confidence 00 111 1111112234566777888889999998876531 44 8999999875433 3
Q ss_pred ccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCC
Q 048805 232 ELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHP 311 (364)
Q Consensus 232 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p 311 (364)
.++++++..++..+++||+|||+++++|++++|++||++|+|+++| ..||+|||+|+||++|
T Consensus 238 ~l~~~ei~~~~~~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E------------------~~~l~a~i~E~lRl~p 299 (419)
T 1q5d_A 238 RLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPEALELVKAE------------------PGLMRNALDEVLRFDN 299 (419)
T ss_dssp TCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhCHHHHHHHHhC------------------HHHHHHHHHHHHHhCC
Confidence 6999999999999999999999999999999999999999999999 3589999999999999
Q ss_pred CCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 312 PAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 312 ~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+++..++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 300 ~~~~~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 361 (419)
T 1q5d_A 300 ILRIGTVRFARQDLEYCGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSASLAYGRG 361 (419)
T ss_dssp SBSSEEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCTTCCTTCCG
T ss_pred ccccccceeeCCCeEECCEEECCCCEEEecHHHhcCChhhCCChhhcCCCCCCCCCCCCCCC
Confidence 9996677999999999999999999999999999999999987 358899998
No 49
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=100.00 E-value=1.7e-47 Score=341.07 Aligned_cols=308 Identities=15% Similarity=0.150 Sum_probs=242.7
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCcc-EEEecCHHHHHHHHhhCCccccCCCCCCcch----h-cccCCcceeeccCC
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSP-TLVVSSAELAGEMFKTHDIVTSNRPKTTPAN----I-LLYECRDIGFANYG 83 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~-~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~ 83 (364)
..+++.++.+++ +||||+++++ +|.+ +|+|++++.+++|+.+ ..|++++...... . ....+.+ ++..+|
T Consensus 23 ~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~-l~~~dg 98 (406)
T 1s1f_A 23 GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVTRLAPHFIPARGA-VGFLDP 98 (406)
T ss_dssp TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBCBSSSSCSSCTTS-GGGCCT
T ss_pred ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCcccccccccccccc-cccCCc
Confidence 578999999995 7999999996 6776 9999999999999976 3576665432111 1 1111333 455679
Q ss_pred hhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhhhhh
Q 048805 84 EYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEEKNI 162 (364)
Q Consensus 84 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~ 162 (364)
+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+...+. .+++++++. +||.+.++.+...
T Consensus 99 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~ 172 (406)
T 1s1f_A 99 PDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLR----AGPPADLTEAVLSPFPIAVICE-LMGVPATDRHSMH 172 (406)
T ss_dssp THHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHH----HCSSEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHH
T ss_pred hHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCccHHHHHhhHhHHHHHHH-HhCCCHHHHHHHH
Confidence 9999999998 89999999999999999999999999974 235899987764 799999998 6999876543211
Q ss_pred ccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHH
Q 048805 163 GKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAII 242 (364)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~ 242 (364)
.+...+.......++..++...+.+++.++++++++. . ..|+++.|++...+ ..++++++..++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-------~-----~~d~l~~ll~~~~~----~~ls~~el~~~~ 236 (406)
T 1s1f_A 173 TWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSDS-------A-----GEDVTSLLGAAVGR----DEITLSEAVGLA 236 (406)
T ss_dssp HHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCCS-------C-----CCSHHHHHHHHHHT----TSSCHHHHHHHH
T ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhC-------C-----CCCHHHHHHHhhcc----cCCCHHHHHHHH
Confidence 1100000000001234456666777777777654422 1 56899999987543 379999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCC-cCCcccc
Q 048805 243 LDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAP-LLLPREI 321 (364)
Q Consensus 243 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~-~~~~R~~ 321 (364)
..+++|| |||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++ ..++|.+
T Consensus 237 ~~l~~AG-eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~~R~~ 297 (406)
T 1s1f_A 237 VLLQIGG-EAVTNNSGQMFHLLLSRPELAERLRSEP------------------EIRPRAIDELLRWIPHRNAVGLSRIA 297 (406)
T ss_dssp HHHHHHT-THHHHHHHHHHHHHHHSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCCBSSCCCCEEE
T ss_pred HHHHHhh-HHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHhhCCCccccCcceEe
Confidence 9999999 9999999999999999999999999994 489999999999999999 4567999
Q ss_pred cccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 322 AESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 322 ~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 298 ~~d~~i~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~~~FG~G 349 (406)
T 1s1f_A 298 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVSFGFG 349 (406)
T ss_dssp SSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTC--CCCCTTCCS
T ss_pred CCCEEECCEEECCCCEEEeCcHHhcCCcccCCCcceeCCCCCCCCCCCCCCC
Confidence 999999999999999999999999999999987 457899998
No 50
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=100.00 E-value=5.2e-48 Score=354.44 Aligned_cols=328 Identities=12% Similarity=0.073 Sum_probs=233.9
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeec
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFA 80 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (364)
|++||++.+ ..+++.++.+|+++||+||++++++.++||++||+.+++++.++...++.++....... ...+.+.+ .
T Consensus 28 P~iG~~~~~-~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~-~~~g~~~~-~ 104 (498)
T 3b6h_A 28 PWLGYALDF-GKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLME-RIFDVQLP-H 104 (498)
T ss_dssp TTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHHH-HTSCCCCT-T
T ss_pred cchhhHHHh-ccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHHH-HHcCCCcc-c
Confidence 899999999 66789999999999999999999999999999999999999765432322221110000 11133433 3
Q ss_pred cCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhh
Q 048805 81 NYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEK 160 (364)
Q Consensus 81 ~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~ 160 (364)
.+++.| |+.. .+.|+...++.+.+.+.+.+...+..........+..+++...+..+++++++.++||..++..+.
T Consensus 105 ~~~~~~---rr~~-~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~vi~~~~~~~~fG~~~~~~~~ 180 (498)
T 3b6h_A 105 YSPSDE---KARM-KLTLLHRELQALTEAMYTNLHAVLLGDATEAGSGWHEMGLLDFSYSFLLRAGYLTLYGIEALPRTH 180 (498)
T ss_dssp CCHHHH---HHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEHHHHHHHHHHHHHHHHHHCBSCSSCCH
T ss_pred cCHHHH---HHHH-HHhhchHhHHHHHHHHHHHHHHHHhhcccccCCCcceecHHHHHHHHHHHHHHHhhcCcccccccc
Confidence 446665 4554 667888888888877777777776655332122345689999999999999999999987532110
Q ss_pred ------------hhccc-cccchhhhhH---------HHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHH
Q 048805 161 ------------NIGKS-NKFDVLSGLI---------GRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVD 218 (364)
Q Consensus 161 ------------~~~~~-~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~ 218 (364)
....+ .+...++... ++..+..+.+. ..+++++.+. ... ..|+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-----~~~-----~~d~l~ 247 (498)
T 3b6h_A 181 ESQAQDRVHSADVFHTFRQLDRLLPKLARGSLSVGDKDHMCSVKSRLW---KLLSPARLAR-----RAH-----RSKWLE 247 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHH---HHTCHHHHTT-----CBS-----CCHHHH
T ss_pred cchhhHHHhhHHHHHHHHHHHhhHHHHHHHhcCchhhHHHHHHHHHHH---HHHHHHHHhc-----ccc-----HHHHHH
Confidence 00000 0001111110 01111111111 1111222211 112 568999
Q ss_pred HHHhhhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCC-------CCChh
Q 048805 219 ILLQLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKL-------NINMK 291 (364)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~-------~~~~~ 291 (364)
.+++...+++ .++++++. .++.+++||++||+++++|++++|++||++|+|+|+|+++++++++ .++.+
T Consensus 248 ~ll~~~~~~~---~~~~~~~~-~~~~~l~ag~~tt~~~l~~~l~~L~~~P~~~~kl~~Ei~~v~~~~~~~~~~~~~~~~~ 323 (498)
T 3b6h_A 248 SYLLHLEEMG---VSEEMQAR-ALVLQLWATQGNMGPAAFWLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQK 323 (498)
T ss_dssp HHHHHHHHTT---CCHHHHHH-HHHHHHHHHHTTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHC----------CCTH
T ss_pred HHHHHHHhCC---CCHHHHHH-HHHHHHHHhhhchHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcccCCCCCcccccCHH
Confidence 9987765432 46777777 8888999999999999999999999999999999999999988654 25999
Q ss_pred hcccchhHHHHHhhhccCCCCCCcCCcccccccccc-----cceecCCCcEEEEeeee-cccCCCCCCC
Q 048805 292 EIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKW-----RGYDIPSKTRVIVNAYG-QFKGIPKVGT 354 (364)
Q Consensus 292 ~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i-----~g~~IpkGt~v~~~~~~-~~~d~~~~~~ 354 (364)
++++||||+|||+|+||++|+ +. ++|.+.+|+++ +||.|||||.|+++.++ +||||++|++
T Consensus 324 ~l~~lpyl~a~i~E~lRl~p~-~~-~~R~~~~d~~~~~~~g~g~~ip~Gt~v~~~~~~~~~~d~~~~~~ 390 (498)
T 3b6h_A 324 VLDSTPVLDSVLSESLRLTAA-PF-ITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTD 390 (498)
T ss_dssp HHHSCHHHHHHHHHHHHHHBC-BC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSS
T ss_pred HHhcCHHHHHHHHHHHhccCC-Cc-ceeeecCCeeeecCCCCeEEeCCCCEEEeCchHhhcCCccccCC
Confidence 999999999999999999985 55 56999999988 78999999999999999 9999999977
No 51
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=100.00 E-value=1.4e-47 Score=341.62 Aligned_cols=309 Identities=16% Similarity=0.145 Sum_probs=244.7
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecC--ccEEEecCHHHHHHHHhhCCccccCCCCCCcch-hcc-cCC--cceeeccCCh
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGN--SPTLVVSSAELAGEMFKTHDIVTSNRPKTTPAN-ILL-YEC--RDIGFANYGE 84 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~--~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~-~~~-~~~--~~~~~~~~~~ 84 (364)
+++++.++.+++ +||||+++.+++ .+.+++++++.+++|+.+. .|++++...... ... ..+ ...++..+|+
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 102 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFADQP 102 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCCTT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCCch
Confidence 456669999997 899999999764 7899999999999999763 565543321100 010 011 2334567799
Q ss_pred hHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCchhhhhhc
Q 048805 85 YWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKADEEEKNIG 163 (364)
Q Consensus 85 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~~~~~~~~ 163 (364)
.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+... +.++|+.+.+. .+++++++. +||.+..+.+....
T Consensus 103 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~----g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~ 176 (411)
T 2dkk_A 103 DHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAE----GPPADLVERVLEPFPIAVVSE-VMGVPAADRERVHS 176 (411)
T ss_dssp HHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHH----CSCEEHHHHTTTHHHHHHHHH-HHTCCSSHHHHHHH
T ss_pred HHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhc----CCCeehHHHHHHHHHHHHHHH-HhCCCHHHHHHHHH
Confidence 999999998 999999999999999999999999999753 35899998776 699999998 59998875433111
Q ss_pred cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHH
Q 048805 164 KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIIL 243 (364)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~ 243 (364)
+...+........+..++...+.+++.++++++++. . ..|+++.|+++ .++ ..++++++..++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-------~-----~~dll~~ll~~-~~~---~~ls~~el~~~~~ 240 (411)
T 2dkk_A 177 WTRQIISTSGGAEAAERAKRGLYGWITETVRARAGS-------E-----GGDVYSMLGAA-VGR---GEVGETEAVGLAG 240 (411)
T ss_dssp HHGGGCSSCSCSHHHHHHHHHHHHHHHHHHHTTTTC-------C-----SSCHHHHHHHH-HHT---TSSCTTSHHHHHH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHhC-------C-----CCCHHHHHHHh-cCC---CCCCHHHHHHHHH
Confidence 111010000122455667777888888887765432 1 56899999987 332 3799999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcC-Cccccc
Q 048805 244 DMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLL-LPREIA 322 (364)
Q Consensus 244 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~-~~R~~~ 322 (364)
.+++|| |||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++.. ++|.+.
T Consensus 241 ~l~~AG-eTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~~~~R~~~ 301 (411)
T 2dkk_A 241 PLQIGG-EAVTHNVGQMLYLLLTRRELMARMRERP------------------GARGTALDELLRWISHRTSVGLARIAL 301 (411)
T ss_dssp HHHHTH-HHHHHHHHHHHHHHHHSHHHHHHHHHCT------------------TCCHHHHHHHHHHSCCBSSCCCCEEES
T ss_pred HHHHhh-HHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHhhCCccccCccceEEC
Confidence 999999 9999999999999999999999999994 48999999999999999955 669999
Q ss_pred ccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 323 ESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 323 ~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+|++++|+.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 302 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dp~~F~PeR~~~~~l~FG~G 352 (411)
T 2dkk_A 302 EDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPDRIDLDRDPNPHLAYGNG 352 (411)
T ss_dssp SCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCCSCSSCCCCTTCCS
T ss_pred CCEEECCEEECCCCEEEeChhhhcCChhhCCCCCCCCCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999987 468999998
No 52
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=100.00 E-value=3.9e-48 Score=345.80 Aligned_cols=317 Identities=16% Similarity=0.125 Sum_probs=248.5
Q ss_pred ccccchhhc----CCCCchHHHHHHHHhCCeE-----EEEecCccEEEecCHHHHHHHHhhCCccccCCCCCC-cch--h
Q 048805 2 HTWQLHQLL----GTLPHRSLKALSERYGALM-----FVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTT-PAN--I 69 (364)
Q Consensus 2 ~lG~~~~~~----~~~~~~~~~~~~~~yG~v~-----~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~-~~~--~ 69 (364)
.+|+.+++. ..+++.++.+|+ +||||+ ++++ .++|+|++++.+++++.++ ..|++++... ... .
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~ 86 (414)
T 2uuq_A 11 VMSHEFQLATAETWPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELE 86 (414)
T ss_dssp --CCSCCCCCTTTTTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHH
T ss_pred hhcCccCcCChhhccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCccc
Confidence 345665554 368899999985 689999 7775 6799999999999999875 5677775432 111 2
Q ss_pred c-c-cCCcceeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHH-HHHHHHHHhHH
Q 048805 70 L-L-YECRDIGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLT-EMLLTVSNNIV 146 (364)
Q Consensus 70 ~-~-~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~-~~~~~~~~~~~ 146 (364)
+ . ..+.+ ++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... +.+|+. +++..++++++
T Consensus 87 ~~~~~~~~~-l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~~vdl~~~~~~~~~~~vi 159 (414)
T 2uuq_A 87 MIGLHDTPP-MVMQDPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRAN-----GGGDIVTELFKPLPSMVV 159 (414)
T ss_dssp HHTCSSSCC-GGGCCTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHT-----TEEEHHHHTTTHHHHHHH
T ss_pred ccccccccc-cccCCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHHHHHHhHHHHH
Confidence 1 1 12334 4455799999999998 999999999999999999999999999753 469997 55679999999
Q ss_pred HHHhhccCCchhhhhhcccccc-c--hh-hhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHh
Q 048805 147 SRCVLGRKADEEEKNIGKSNKF-D--VL-SGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQ 222 (364)
Q Consensus 147 ~~~~fG~~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 222 (364)
+. +||.+.++.+....+...+ . .+ +. ..+..++...+.+++.++++++++. . ..|+++.|++
T Consensus 160 ~~-~~G~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~i~~r~~~-------~-----~~dll~~ll~ 225 (414)
T 2uuq_A 160 AH-YLGVPEEDWTQFDGWTQAIVAANAVDGA-TTGALDAVGSMMAYFTGLIERRRTE-------P-----ADDAISHLVA 225 (414)
T ss_dssp HH-HTTCCGGGHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHHHHHHHHHTTS-------C-----CSSHHHHHHH
T ss_pred HH-HhCCCHHHHHHHHHHHHHHHhhcccCCc-hhHHHHHHHHHHHHHHHHHHHHHhC-------C-----CCCHHHHHHh
Confidence 99 6899886433211100000 0 01 11 0244566777888888888876543 1 5689999998
Q ss_pred hhhcCccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHH
Q 048805 223 LRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCV 302 (364)
Q Consensus 223 ~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~ 302 (364)
....+ .+..++++++..++..+++||+|||+++++|++++|++||++|+|+++|+ +||+||
T Consensus 226 ~~~~~-~~~~ls~~ei~~~~~~l~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~ 286 (414)
T 2uuq_A 226 AGVGA-DGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSMPLLHRRPDQRRLLLDDP------------------EGIPDA 286 (414)
T ss_dssp TTTTC-TTCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHH
T ss_pred ccccc-CCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHH
Confidence 75410 12368999999999999999999999999999999999999999999993 599999
Q ss_pred HhhhccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCC-CC----------ccccccccC
Q 048805 303 VKETLRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKV-GT----------SQKISFQTG 363 (364)
Q Consensus 303 i~E~lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~-~~----------~~f~PFg~G 363 (364)
|+|+||++|+++ .++|.+.+|++++||.||||+.|+++.+++||||++| ++ ..|+|||.|
T Consensus 287 i~E~lRl~p~~~-~~~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeR~~~~~~~FG~G 357 (414)
T 2uuq_A 287 VEELLRLTSPVQ-GLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHG 357 (414)
T ss_dssp HHHHHHHHCSBC-CEEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCTTTTSCCTTCCCCSCCTTCSS
T ss_pred HHHHHHhCCCcC-CcceEECCCEEECCEEECCCCEEEeChhhhCCCHHHhCCCchhcCCCCCCCCCcCCCCC
Confidence 999999999999 5679999999999999999999999999999999999 65 468899998
No 53
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=100.00 E-value=5.7e-48 Score=344.57 Aligned_cols=310 Identities=18% Similarity=0.206 Sum_probs=247.5
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCCCCcch----hccc-------CC-cce
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPAN----ILLY-------EC-RDI 77 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~----~~~~-------~~-~~~ 77 (364)
..+++.++.+| ++||||+++++ ++.++|++++|+.+++++.++. +++++ ..... .... .. .+.
T Consensus 16 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (411)
T 1gwi_A 16 VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDI-NVWGAWRRGEIPADWPLIGLANPGRS 91 (411)
T ss_dssp CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCG-GGCHHHHTTCSCTTCTTHHHHSCCSS
T ss_pred cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCc-ccccccccccCCcccchhhhhccccc
Confidence 57889999999 99999999998 8899999999999999997653 33332 10100 0000 01 223
Q ss_pred eeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHH-HHHHhHHHHHhhccCCc
Q 048805 78 GFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLL-TVSNNIVSRCVLGRKAD 156 (364)
Q Consensus 78 ~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~-~~~~~~~~~~~fG~~~~ 156 (364)
++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+...+. .+++++++. +||.+.+
T Consensus 92 l~~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 165 (411)
T 1gwi_A 92 MLTVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPA----DGGVVDLKAAFAYPLPMYVVAD-LMGIEEA 165 (411)
T ss_dssp GGGCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCC----SCCCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred cccCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHH----cCCCcchHHHHhhHHHHHHHHH-HhCCCHH
Confidence 4667799999999998 89999999999999999999999998852 356899998886 599999996 7999876
Q ss_pred hhhhhhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHH
Q 048805 157 EEEKNIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQD 236 (364)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~ 236 (364)
..+........+........+..++...+.+++.++++++++.. ..|+++.|+++..++ ..++++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~ 230 (411)
T 1gwi_A 166 RLPRLKVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAAP------------GDDLTSALIQASENG---DHLTDA 230 (411)
T ss_dssp GHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHH
T ss_pred HHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhcccC---CCCCHH
Confidence 43321110000000001124566777788888998888876431 568999999875432 369999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcC
Q 048805 237 NLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLL 316 (364)
Q Consensus 237 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~ 316 (364)
++..++..+++||+|||+++++|++++|++||++|+|+++| .+||+|||+|+||++|+++..
T Consensus 231 ~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~e------------------~~~l~a~i~E~lRl~p~~~~~ 292 (411)
T 1gwi_A 231 EIVSTLQLMVAAGHETTISLIVNAVVNLSTHPEQRALVLSG------------------EAEWSAVVEETLRFSTPTSHV 292 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTT------------------SSCHHHHHHHHHHHSCSBCCE
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHhChHHHHHHHcC------------------hHHHHHHHHHHHHhCCcccCC
Confidence 99999999999999999999999999999999999999997 357999999999999999976
Q ss_pred CcccccccccccceecCCCcEEEEeeeecccCCCCC-CC-----------ccccccccC
Q 048805 317 LPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKV-GT-----------SQKISFQTG 363 (364)
Q Consensus 317 ~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~-~~-----------~~f~PFg~G 363 (364)
++|.+.+|++++||.||||+.|+++.+++||||++| ++ ..|+|||.|
T Consensus 293 ~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~G~dP~~F~PeRf~~~~~lpFG~G 351 (411)
T 1gwi_A 293 LIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRFDLTRTSGNRHISFGHG 351 (411)
T ss_dssp EEEEESSCEEETTEEECTTCEEEECHHHHTTCHHHHCGGGGSCCTTCCCSSCCCTTCCS
T ss_pred ceeeeCCCeEECCEEECCCCEEEecHHHhcCChhhcCCChhhcCCCCCCCCCcccCCCC
Confidence 779999999999999999999999999999999999 54 468999998
No 54
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=100.00 E-value=9.1e-48 Score=342.14 Aligned_cols=309 Identities=15% Similarity=0.201 Sum_probs=242.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEEec-Cc---cEEEecCHHHHHHHHhhCCccccCCCC------CCcchhc--ccCCccee
Q 048805 11 GTLPHRSLKALSERYGALMFVYFG-NS---PTLVVSSAELAGEMFKTHDIVTSNRPK------TTPANIL--LYECRDIG 78 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~-~~---~~vvi~~~~~i~~i~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~ 78 (364)
.+.++.++.+|+++ |||++++++ |. ++|+|++|+.+++++..+ ..|+.++. ....... ...+. .+
T Consensus 12 ~~~~~~~~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~l 88 (398)
T 1lfk_A 12 RRQGLDPADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVG-NL 88 (398)
T ss_dssp CEETTEECHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTT-CG
T ss_pred CcCCCChhHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCccccccccccc-Cc
Confidence 45566777778777 999999875 55 899999999999999322 24665543 1111111 11123 34
Q ss_pred eccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHH-HHHhHHHHHhhccCCch
Q 048805 79 FANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLT-VSNNIVSRCVLGRKADE 157 (364)
Q Consensus 79 ~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~-~~~~~~~~~~fG~~~~~ 157 (364)
+..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+.. .++++|+.+.+.. ++.++++. +||.+.++
T Consensus 89 ~~~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~----~~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 162 (398)
T 1lfk_A 89 MDYDPPEHTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMER----AGSPADLIAFVADKVPGAVLCE-LVGVPRDD 162 (398)
T ss_dssp GGCCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHH----HCSSEEHHHHTTTTHHHHHHHH-HHTCCGGG
T ss_pred cccCCHHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHh----cCCCccHHHHHHHHHHHHHHHH-HcCCCHHH
Confidence 556799999999998 89999999999999999999999999974 3467999999987 88888887 68998765
Q ss_pred hhhhhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHH
Q 048805 158 EEKNIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDN 237 (364)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 237 (364)
.+........+...+...++..++...+.+++.+.++++++.. .+|+++.|+++. + ..+++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~--~---~~l~~~e 225 (398)
T 1lfk_A 163 RDMFMKLCHGHLDASLSQKRRAALGDKFSRYLLAMIARERKEP------------GEGMIGAVVAEY--G---DDATDEE 225 (398)
T ss_dssp HHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHH--G---GGSCHHH
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhc--C---CCCCHHH
Confidence 4331111110000112235566777888889999998876531 568999999875 2 2789999
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCC
Q 048805 238 LKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLL 317 (364)
Q Consensus 238 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~ 317 (364)
+..++..+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|+||++|+++..+
T Consensus 226 l~~~~~~l~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~~~ 287 (398)
T 1lfk_A 226 LRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQ------------------SAQRAVDELIRYLTVPYSPT 287 (398)
T ss_dssp HHHHHHHHHHHTSHHHHHHHHHHHHHHHHSGGGGGGGSSCHH------------------HHHHHHHHHHHHHCCBSCCS
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHCHHHHHHHHhCHH------------------HHHHHHHHHHHhCccccccc
Confidence 999999999999999999999999999999999999999953 79999999999999999667
Q ss_pred cccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 318 PREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 318 ~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 288 ~R~~~~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 343 (398)
T 1lfk_A 288 PRIAREDLTLAGQEIKKGDSVICSLPAANRDPALAPDVDRLDVTREPIPHVAFGHG 343 (398)
T ss_dssp CEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTSCCCCCCTTCCS
T ss_pred ceecCCCeeECCEEECCCCEEEeChHHhCCCchhcCCccccCCCCCCCCCCCCCCC
Confidence 7999999999999999999999999999999999987 468899998
No 55
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=100.00 E-value=4e-47 Score=341.40 Aligned_cols=307 Identities=16% Similarity=0.171 Sum_probs=243.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEE--------ecCccEEEecCHHHHHHHHhhCCccccCCCCCCcch--------hcccCC
Q 048805 11 GTLPHRSLKALSERYGALMFVY--------FGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPAN--------ILLYEC 74 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~--------~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~--------~~~~~~ 74 (364)
..+++.++.++ ++||||+++. +|+.++++|++++.+++++++. ..|+.++...... ... ..
T Consensus 36 ~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~-~~ 112 (433)
T 3ivy_A 36 ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYENGVIPRFKNDIAREDIE-VQ 112 (433)
T ss_dssp TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTTCSCCCCCTTCCHHHHH-GG
T ss_pred cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcccccccccccccccccc-cc
Confidence 35699999999 7899999998 4457899999999999999754 5677665543221 111 12
Q ss_pred cceeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhcc
Q 048805 75 RDIGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGR 153 (364)
Q Consensus 75 ~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~ 153 (364)
...++..+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... +++|+...+ ..+++++++.+ ||.
T Consensus 113 ~~~l~~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~~~d~~~~~~~~~~~~vi~~l-~G~ 185 (433)
T 3ivy_A 113 RFVMLNMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAAA-----GSGDFVEQVSCELPLQAIAGL-LGV 185 (433)
T ss_dssp GGSGGGCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHHH-----CEEEHHHHTTSHHHHHHHHHH-HTC
T ss_pred cCCccccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhC-----CCeeHHHHHHHHHHHHHHHHH-cCC
Confidence 3345577799999999998 999999999999999999999999999754 579999998 99999999996 898
Q ss_pred CCchhhhhhcccccc-ch-hhhh-HHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccc
Q 048805 154 KADEEEKNIGKSNKF-DV-LSGL-IGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLV 230 (364)
Q Consensus 154 ~~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ 230 (364)
+..+.+....+...+ .. .+.. ..+..++...+.+++.++++++++.. .+|+++.|+++..++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~--- 250 (433)
T 3ivy_A 186 PQEDRGKLFHWSNEMTGNEDPEYAHIDPKASSAELIGYAMKMAEEKAKNP------------ADDIVTQLIQADIDG--- 250 (433)
T ss_dssp CHHHHHHHHHHHTTCSCCCCGGGTTCCHHHHHHHHHHHHHHHHHHC-------------------CHHHHHSCC--C---
T ss_pred CHHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHHHHHHhcCC------------CCcHHHHHHhhhcCC---
Confidence 654433311111000 00 0111 12456777788888888888765431 568999999876543
Q ss_pred cccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCC
Q 048805 231 AELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLH 310 (364)
Q Consensus 231 ~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~ 310 (364)
..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++ +|||+|+||++
T Consensus 251 ~~ls~~ei~~~~~~ll~AG~dTTa~~l~~~l~~L~~~P~~~~~l~~E~~--------------------~a~i~E~LRl~ 310 (433)
T 3ivy_A 251 EKLSDDEFGFFVVMLAVAGNETTRNSITQGMMAFAEHPDQWELYKKVRP--------------------ETAADEIVRWA 310 (433)
T ss_dssp CCCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHCHHHHHHHHHHCC--------------------TTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhCcc--------------------cchhHHHhhhC
Confidence 3799999999999999999999999999999999999999999999953 78999999999
Q ss_pred CCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccc-cC
Q 048805 311 PPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQ-TG 363 (364)
Q Consensus 311 p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg-~G 363 (364)
|+++. ++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+||| .|
T Consensus 311 p~~~~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~f~dp~~F~p~R~~~~~l~FGg~G 373 (433)
T 3ivy_A 311 TPVTA-FQRTALRDYELSGVQIKKGQRVVMFYRSANFDEEVFQDPFTFNILRNPNPHVGFGGTG 373 (433)
T ss_dssp CSBCE-EEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCSCCCCTTCSSS
T ss_pred cchhc-eeeEECCCEEECCEEECCCCEEEEChhhhcCCchhCCCcCccCCCCCCCCCCCCCCCC
Confidence 99998 46999999999999999999999999999999999987 5689999 88
No 56
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=100.00 E-value=1.2e-46 Score=336.31 Aligned_cols=301 Identities=19% Similarity=0.221 Sum_probs=243.4
Q ss_pred CCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHHHH
Q 048805 12 TLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKVRK 91 (364)
Q Consensus 12 ~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 91 (364)
.+++.++.++++ |||| ++++.+.+++++++.+++++.+. ..|++++.... ..... +...++..+|+.|+++|+
T Consensus 28 ~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~-~~~~~-~~~~~~~~~g~~~~~~R~ 100 (411)
T 2jjn_A 28 TALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRVI-EGASP-TPGMIHEIDPPEHRALRK 100 (411)
T ss_dssp HHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGGS-TTCCC-CTTCGGGCCTTHHHHHHH
T ss_pred cChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCcccccC-Ccccc-cccccccCCchHHHHHHH
Confidence 467889999976 9998 56767899999999999999865 46776653211 11111 223455667999999999
Q ss_pred HHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhh-------c
Q 048805 92 ICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNI-------G 163 (364)
Q Consensus 92 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~-------~ 163 (364)
.+ .+.|++..++.+.+.+.+.++++++. . ++++|+...+ ..+++++++.+ ||.+.++.+... .
T Consensus 101 ~~-~~~fs~~~l~~~~~~i~~~~~~ll~~--~-----~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~~~~~~~~~~~~~~ 171 (411)
T 2jjn_A 101 VV-SSAFTPRTISDLEPRIRDVTRSLLAD--A-----GESFDLVDVLAFPLPVTIVAEL-LGLPPMDHEQFGDWSGALVD 171 (411)
T ss_dssp HH-HHHSCHHHHHTTHHHHHHHHHHHHHT--S-----CSEEEHHHHTTTHHHHHHHHHH-HTCCSCCCSTTCCHHHHHHH
T ss_pred Hh-hhhcCHHHHHHHHHHHHHHHHHHHhc--C-----CCceeHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHh
Confidence 98 89999999999999999999999987 1 2479999554 68999999998 999876433211 0
Q ss_pred -cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHH
Q 048805 164 -KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAII 242 (364)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~ 242 (364)
..+.+. .+...++..++...+.+++.++++++++.. ..|+++.|+++..++ ..++++++..++
T Consensus 172 ~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~el~~~~ 235 (411)
T 2jjn_A 172 IQMDDPT-DPALAERIADVLNPLTAYLKARCAERRADP------------GDDLISRLVLAEVDG---RALDDEEAANFS 235 (411)
T ss_dssp SCCSCTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCCBTT---BCCCHHHHHHHH
T ss_pred ccCcccc-chHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhcccCC---CCCCHHHHHHHH
Confidence 111110 023345667777888889999988876521 568999999875432 369999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccc
Q 048805 243 LDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIA 322 (364)
Q Consensus 243 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~ 322 (364)
..+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|+||++|+++. ++|.+.
T Consensus 236 ~~~~~AG~eTt~~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~~~-~~R~~~ 296 (411)
T 2jjn_A 236 TALLLAGHITTTVLLGNIVRTLDEHPAHWDAAAEDPG------------------RIPAIVEEVLRYRPPFPQ-MQRTTT 296 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHCGG------------------GHHHHHHHHHHHSCSSCE-EEEEES
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------hHHHHHHHHhhhCCCcCC-cceEEC
Confidence 9999999999999999999999999999999999953 899999999999999996 679999
Q ss_pred ccccccceecCCCcEEEEeeeecccCCCCCCC----------c--cccccccC
Q 048805 323 ESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------S--QKISFQTG 363 (364)
Q Consensus 323 ~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~--~f~PFg~G 363 (364)
+|++++||.||||+.|+++.+++||||++|++ + .|+|||.|
T Consensus 297 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~~~~pFG~G 349 (411)
T 2jjn_A 297 KATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFDPSRKSGGAAQLSFGHG 349 (411)
T ss_dssp SCEEETTEEECSSCEEEEEHHHHHTCTTTSSSTTSCCTTCCCSSCCCGGGCSS
T ss_pred CCeEECCEEECCCCEEEechhhhCCChhhcCCccccCCCCCCCCCCccCCCCC
Confidence 99999999999999999999999999999987 2 78999998
No 57
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=100.00 E-value=1.1e-47 Score=345.50 Aligned_cols=306 Identities=17% Similarity=0.212 Sum_probs=234.3
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHHH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKVR 90 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 90 (364)
..+++.++.++ ++||||+++..++ .++|++++.+++|+.+.. .|++++........ .+.+.++..+|+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~--~~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPV--MRGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCS--CC-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-cccccccccccccc--cCCCccccCCcHHHHHHH
Confidence 46788899887 6899999987665 899999999999998764 47766554332222 234456677799999999
Q ss_pred HHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHH-HHHHHHhHHHHHhhccCCchhhhhhc------
Q 048805 91 KICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEM-LLTVSNNIVSRCVLGRKADEEEKNIG------ 163 (364)
Q Consensus 91 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~-~~~~~~~~~~~~~fG~~~~~~~~~~~------ 163 (364)
+.+ .+.|++..++.+.+.+.+.++++++.|.. ++.+|+... ...++.++++. +||.+..+.+....
T Consensus 126 r~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~-----~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~~~~~~ 198 (441)
T 3nc3_A 126 RIV-VRSFIGDALDHLSPLIKQNAENLLAPYLE-----RGKSDLVNDFGKTFAVCVTMD-MLGLDKRDHEKISEWHSGVA 198 (441)
T ss_dssp HHH-HHHHHHTHHHHHHHHHHHHHHHHHTTTTT-----TTEEECCCCCHHHHHHHHHHH-HTTCCGGGHHHHHHHHHHHH
T ss_pred HHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCcHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHH
Confidence 998 99999999999999999999999988753 357887544 45688899998 58998765443111
Q ss_pred -cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHH
Q 048805 164 -KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAII 242 (364)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~ 242 (364)
....+........+..+....+.+++.++++++++.. .+|+++.|+++..++ ..++++++..++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------------~~Dll~~Ll~~~~~~---~~ls~~el~~~~ 263 (441)
T 3nc3_A 199 DFITSISQSPEARAHSLWCSEQLSQYLMPVIKERRVNP------------GSDLISILCTSEYEG---MALSDKDILALI 263 (441)
T ss_dssp HHHHCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSC------------CSSHHHHHCC---------CCCHHHHHHHH
T ss_pred HhcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC---CCCCHHHHHHHH
Confidence 1111111122235566777888888998888876431 568999999876543 379999999999
Q ss_pred HHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccc
Q 048805 243 LDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIA 322 (364)
Q Consensus 243 ~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~ 322 (364)
..+++||+|||+++++|++++|++||++|+|+++| ++||+|||+|+||++|+++. ++|.+.
T Consensus 264 ~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E------------------~~~l~a~i~E~LRl~pp~~~-~~R~~~ 324 (441)
T 3nc3_A 264 LNVLLAATEPADKTLALMIYHLLNNPEQMNDVLAD------------------RSLVPRAIAETLRYKPPVQL-IPRQLS 324 (441)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHC------------------GGGHHHHHHHHHHHSCSBCE-EEEEES
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHhC------------------HHHHHHHHHHhhhcCCcccC-ccEEEC
Confidence 99999999999999999999999999999999998 58999999999999999998 569999
Q ss_pred ccccccceecCCCcEEEEeeeecccCCCCCCC--------------------ccccccccC
Q 048805 323 ESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT--------------------SQKISFQTG 363 (364)
Q Consensus 323 ~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~--------------------~~f~PFg~G 363 (364)
+|++++|+.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 325 ~d~~l~G~~Ip~Gt~V~~~~~~~~rdp~~f~dP~~F~PeR~~~~~~~~~~~~~~~l~FG~G 385 (441)
T 3nc3_A 325 QDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSG 385 (441)
T ss_dssp SCEESSSCEECTTCEEEEEHHHHHTCTTTSSSTTSCCTTCTTSCGGGTTSSSCSSCTTCCG
T ss_pred CCEEECCEEECCCCEEEechHHhcCChhhCCCcccCCCCCCCcccccccCCCCCcccCCCC
Confidence 99999999999999999999999999999986 246899988
No 58
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=100.00 E-value=8.6e-47 Score=335.89 Aligned_cols=303 Identities=13% Similarity=0.135 Sum_probs=243.0
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcch------hcccC-CcceeeccCC
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPAN------ILLYE-CRDIGFANYG 83 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~ 83 (364)
..+++.++.++ ++||||++ + |.++++|++++.+++++.+ ..|++++...... ..... +.+ ++..+|
T Consensus 12 ~~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~g 84 (397)
T 3buj_A 12 RRDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDI-ILFQDE 84 (397)
T ss_dssp HHCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTC-GGGCCT
T ss_pred ccCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccc-cccCCc
Confidence 45789999877 58999998 6 5889999999999999975 3455432211000 11100 233 455679
Q ss_pred hhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHH-HHHHHHhHHHHHhhccCCchhhhh-
Q 048805 84 EYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEM-LLTVSNNIVSRCVLGRKADEEEKN- 161 (364)
Q Consensus 84 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~-~~~~~~~~~~~~~fG~~~~~~~~~- 161 (364)
+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+... +++|+... ...+++++++.+ ||.+.+..+..
T Consensus 85 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~dl~~~~~~~~~~~vi~~~-~G~~~~~~~~~~ 157 (397)
T 3buj_A 85 PDHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALAR-----GAMDVVDELAYPLALRAVLGL-LGLPAADWGAVG 157 (397)
T ss_dssp THHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHTT-----TEEEHHHHTHHHHHHHHHHHH-HTCCGGGHHHHH
T ss_pred hhHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhhc-----CCeehHHHHHHHhHHHHHHHH-hCCCHHHHHHHH
Confidence 9999999998 899999999999999999999999998742 57998755 478999999998 99987654331
Q ss_pred ------hccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCH
Q 048805 162 ------IGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQ 235 (364)
Q Consensus 162 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 235 (364)
....... ..+...++..++...+.+++.++++++++.. ..|+++.|+++..++ .+++
T Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~----~ls~ 220 (397)
T 3buj_A 158 RWSRDVGRTLDRG-ASAEDMRRGHAAIAEFADYVERALARRRREG------------GEDLLALMLDAHDRG----LMSR 220 (397)
T ss_dssp HHHHHHHGGGCSS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------------CCSHHHHHHHHHHTT----SSCH
T ss_pred HHHHHHHhhcCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHcCC------------CCCHHHHHHHhhhcC----CCCH
Confidence 1111111 0112335566777888899999998877542 568999999875332 2999
Q ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCc
Q 048805 236 DNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPL 315 (364)
Q Consensus 236 ~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~ 315 (364)
+++..++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++
T Consensus 221 ~ei~~~~~~~~~AG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~- 281 (397)
T 3buj_A 221 NEIVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRP------------------DLLAQAVEECLRYDPSVQ- 281 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSCC-
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHHHhCHHHHHHHhhCH------------------HHHHHHHHHHHhhcCccc-
Confidence 9999999999999999999999999999999999999999993 499999999999999999
Q ss_pred CCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 316 LLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 316 ~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
.++|.+.+|++++||.||||+.|+++.+++||||++|++ ..++|||.|
T Consensus 282 ~~~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~~~FG~G 339 (397)
T 3buj_A 282 SNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRPDDFDIERDPVPSMSFGAG 339 (397)
T ss_dssp EEEEEESSCEEETTEEECTTCEEEEEHHHHTTCTTTCSSTTSCCTTSCCCCCSTTCCG
T ss_pred CcceEECCCEEECCEEECCCCEEEEChhhhCCCccccCCccccCCCCCCCCCCCCCCC
Confidence 567999999999999999999999999999999999987 357899998
No 59
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=100.00 E-value=3.1e-47 Score=339.63 Aligned_cols=305 Identities=18% Similarity=0.188 Sum_probs=245.3
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecC--ccEEEecCHHHHHHHHhhCCccccCCCCCCcchhccc--CC-cceeeccCChh
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGN--SPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLY--EC-RDIGFANYGEY 85 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~--~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~ 85 (364)
..+++.++.++++ ||||+++...| .++++|++++.+++++++. ..|++++.......... .. ...++..+|+.
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 113 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQ 113 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccCcHH
Confidence 3578999999987 99999987555 7899999999999999654 46776654332211110 01 34456777999
Q ss_pred HHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhc-
Q 048805 86 WRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIG- 163 (364)
Q Consensus 86 ~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~- 163 (364)
|+++|+++ .+.|++..++.+.+.+.+.++++++.+... +++|+.+.+ ..+++++++. +||.+..+.+....
T Consensus 114 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~-----~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~~ 186 (415)
T 3mgx_A 114 HRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLDG-----EVCDAATAIGPRIPAAVVCE-ILGVPAEDEDMLIDL 186 (415)
T ss_dssp HHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSSS-----SCEESTTTTTTHHHHHHHHH-HHTCCGGGHHHHHHH
T ss_pred HHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHH
Confidence 99999998 999999999999999999999999887542 479999887 6799999998 58987655333111
Q ss_pred ---cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHH
Q 048805 164 ---KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKA 240 (364)
Q Consensus 164 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~ 240 (364)
........ .......++...+.+++.++++++++.. .+|+++.|+++. .++++++..
T Consensus 187 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~i~~rr~~~------------~~dll~~ll~~~-------~ls~~el~~ 246 (415)
T 3mgx_A 187 TNHAFGGEDEL-FDGMTPRQAHTEILVYFDELITARRKEP------------GDDLVSTLVTDD-------DLTIDDVLL 246 (415)
T ss_dssp HHHHTSCCC-----CCCHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHCT-------TSCHHHHHH
T ss_pred HHHHHcccCcc-cchHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhCC-------CCCHHHHHH
Confidence 11111000 0001223667788889999998877542 568999999764 589999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccc
Q 048805 241 IILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPRE 320 (364)
Q Consensus 241 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~ 320 (364)
++..+++||+|||+++++|++++|++||++|+|+++| .+||+|||+|+||++|+++. ++|.
T Consensus 247 ~~~~ll~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E------------------~~~l~a~i~E~LRl~pp~~~-~~R~ 307 (415)
T 3mgx_A 247 NCDNVLIGGNETTRHAITGAVHALATVPGLLTALRDG------------------SADVDTVVEEVLRWTSPAMH-VLRV 307 (415)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHSTTHHHHHHHT------------------SSCHHHHHHHHHHHHCCBCE-EEEE
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHCHHHHHHHHhC------------------hHhHHHHHHHHHHhcCcccc-ccee
Confidence 9999999999999999999999999999999999999 38999999999999999996 5699
Q ss_pred ccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 321 IAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 321 ~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 308 ~~~d~~l~G~~Ip~G~~V~~~~~a~~rDp~~~~dP~~F~P~R~~~~~l~FG~G 360 (415)
T 3mgx_A 308 TTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFLPGRKPNRHITFGHG 360 (415)
T ss_dssp ESSCEEETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTCCSCCCCTTCCG
T ss_pred cCCCeeECCEEECCCCEEEechHHhCCChhhcCCccccCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999999987 468999998
No 60
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=100.00 E-value=8.9e-48 Score=341.33 Aligned_cols=295 Identities=19% Similarity=0.290 Sum_probs=231.2
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCC-CCCcchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRP-KTTPANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.+|+++||||++ ++++.++|+++||+.+++++.++ .|++++ ......... +.+ ++
T Consensus 8 p~iGnl~~~-~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~--g~~-l~ 80 (389)
T 1n97_A 8 EAWPYLKDL-QQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT--GRG-LL 80 (389)
T ss_dssp HHHHHHHHH-HHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--CSS-TT
T ss_pred cccccHHHH-hhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--CCc-cc
Confidence 689999998 67899999999999999999 99988999999999999999865 676654 111111111 334 44
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhh
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEE 159 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~ 159 (364)
..+|+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++.+. ++++|+.+.+..+++++++.++||.+.++
T Consensus 81 ~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~------~~~~dl~~~~~~~~~~vi~~~~fG~~~~~-- 151 (389)
T 1n97_A 81 TDWGESWKEARKAL-KDPFLPKNVRGYREAMEEEARAFFGEWR------GEERDLDHEMLALSLRLLGRALFGKPLSP-- 151 (389)
T ss_dssp TCCHHHHHHHHHHH-CGGGSHHHHHTTHHHHHHHHHHHHHTCC------SCCEEHHHHHHHHHHHHHHHHHHSSCCCH--
T ss_pred cCCcHHHHHHHHHh-CcccCHHHHHHHHHHHHHHHHHHHHHcc------CCcCcHHHHHHHHHHHHHHHHHcCCcchH--
Confidence 55799999999998 9999999999999999999999998874 46899999999999999999999999873
Q ss_pred hhhc------------cccccchhhh-hHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhc
Q 048805 160 KNIG------------KSNKFDVLSG-LIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKD 226 (364)
Q Consensus 160 ~~~~------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ 226 (364)
.... ..+++.+++. ...+..++...+.+++.+++ + .. ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i--------~----------~r-----ll----- 203 (389)
T 1n97_A 152 SLAEHALKALDRIMAQTRSPLALLDLAAEARFRKDRGALYREAEALI--------V----------HP-----PL----- 203 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHHHHHGGGT--------T----------ST-----TG-----
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhcCCchhHHHHHHHHHHHHHHHHHH--------H----------HH-----hc-----
Confidence 2000 0001111110 11111122222222211111 1 11 12
Q ss_pred CccccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhh
Q 048805 227 GMLVAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKET 306 (364)
Q Consensus 227 ~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~ 306 (364)
..++++++..++..+++||+|||+++++|++++|++||++|+|+++|++++. |||+|+
T Consensus 204 ----~~l~~~~l~~~~~~~~~aG~~Tt~~~l~~~l~~L~~~P~~~~~l~~E~~~~~------------------a~i~E~ 261 (389)
T 1n97_A 204 ----SHLPRERALSEAVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL------------------AAFQEA 261 (389)
T ss_dssp ----GGSCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHH------------------HHHHHH
T ss_pred ----ccCCHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH------------------HHHHHH
Confidence 1589999999999999999999999999999999999999999999998763 999999
Q ss_pred ccCCCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------------ccccccccCC
Q 048805 307 LRLHPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-----------------SQKISFQTGF 364 (364)
Q Consensus 307 lRl~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-----------------~~f~PFg~G~ 364 (364)
||++|+++.. +|.+.+|++++||.||||+.|.++.+++||| +|++ ..|+|||.|-
T Consensus 262 lRl~p~~~~~-~R~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rd--~~~dp~~F~PeR~l~~~~~~~~~~~~FG~G~ 333 (389)
T 1n97_A 262 LRLYPPAWIL-TRRLERPLLLGEDRLPPGTTLVLSPYVTQRL--HFPDGEAFRPERFLEERGTPSGRYFPFGLGQ 333 (389)
T ss_dssp HHHSCSSCCE-EEEESSCEEETTEEECTTCEEEECHHHHHHH--SSTTTTSCCTTHHHHSCCCCBTTBCTTCCST
T ss_pred HhcCCCcccc-ceeeCCCceECCEEeCCCCEEEECHHHHhhh--cCCCccccCCccCCCCCCCCCCCccCCCCCC
Confidence 9999999985 7999999999999999999999999999999 8866 1489999983
No 61
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=100.00 E-value=1.4e-46 Score=336.96 Aligned_cols=306 Identities=19% Similarity=0.243 Sum_probs=243.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcc-------cCCcceeeccCC
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILL-------YECRDIGFANYG 83 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 83 (364)
..+++.++.+| ++||||+++.++ +++|++++.+++++++. ..+++++......... ......++..+|
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 102 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLDP 102 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCCT
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcCC
Confidence 57899999998 578999987654 99999999999999764 3444444322211111 011234556679
Q ss_pred hhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhh
Q 048805 84 EYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNI 162 (364)
Q Consensus 84 ~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~ 162 (364)
+.|+++|+.+ .+.|+++.++.+.+.+.+.++++++ +.. ++.+|+...+ ..+++++++. +||.+....+...
T Consensus 103 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~-l~~-----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~~ 174 (418)
T 3r9b_A 103 PDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLD-AVD-----GPEFNLIDNLAYPLPVAVICR-LLGVPIEDEPKFS 174 (418)
T ss_dssp THHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHH-TCC-----SSEEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHH
T ss_pred chHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHh-hhc-----cCCeehHHHHhCcCCHHHHHH-HcCCCHHHHHHHH
Confidence 9999999998 8999999999999999999999999 743 3589987655 5899999999 8999887544311
Q ss_pred c-------cccccc---h-hhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCcccc
Q 048805 163 G-------KSNKFD---V-LSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVA 231 (364)
Q Consensus 163 ~-------~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 231 (364)
. ...... . ......+..++...+.+++.++++++++.. ..|+++.|+++..++ .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~ 239 (418)
T 3r9b_A 175 RASALLAAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRRTP------------GEDLMSGLVAVEESG---D 239 (418)
T ss_dssp HHHHHHHHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTTSC------------CSSHHHHHHHHHHHS---S
T ss_pred HHHHHHHhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------------CccHHHHHHHhhhcc---C
Confidence 1 111110 0 112345667777788888888887765431 668999999875544 3
Q ss_pred ccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCC
Q 048805 232 ELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHP 311 (364)
Q Consensus 232 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p 311 (364)
.++++++..++..+++||+|||+++++|++++|++||++|+|+++|+ .|++|||+|+||++|
T Consensus 240 ~ls~~ei~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p 301 (418)
T 3r9b_A 240 QLTEDEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADG------------------SRASAVIEETMRYDP 301 (418)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHSTTHHHHHHHCG------------------GGHHHHHHHHHHHSC
T ss_pred CCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCHHHHHHHHhCh------------------HhHHHHHHHHHHhCC
Confidence 69999999999999999999999999999999999999999999994 489999999999999
Q ss_pred CCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 312 PAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 312 ~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+++... |.+.+|++++|+.||||+.|+++.+++||||++|++ ..++|||.|
T Consensus 302 ~~~~~~-R~~~~d~~l~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~~~~~FG~G 362 (418)
T 3r9b_A 302 PVQLVS-RYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDRAQIRHLGFGKG 362 (418)
T ss_dssp SBCCEE-EEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCCCCCTTCCG
T ss_pred ccccce-eEeCCCeEECCEEECCCCEEEEChHHhcCCcccCCCcCcCCCCCCCCCCcCCCCc
Confidence 999864 999999999999999999999999999999999987 357899998
No 62
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=100.00 E-value=1.2e-46 Score=337.51 Aligned_cols=308 Identities=13% Similarity=0.125 Sum_probs=247.3
Q ss_pred CCCCchHHHHHHHHhC-CeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHH
Q 048805 11 GTLPHRSLKALSERYG-ALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKV 89 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (364)
..+++.++.++++++| ||+++..++ +.++|++++.+++|+++ ...|++++......... .+...++..+|+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~-~~~~~~~~~dg~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRS-PERFSSRVIWVPREAGE-AYDMVPTKLDPPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC-TTTEETTCCSSSHHHHH-HCCCTTTTCCTTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcC-hhhccCCcccCCccccc-ccccCCccCCcHHHHHH
Confidence 4588999999988766 899998775 58999999999999954 45777766432222111 12234566779999999
Q ss_pred HHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhc----c
Q 048805 90 RKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIG----K 164 (364)
Q Consensus 90 R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~----~ 164 (364)
|+.+ .+.|++..++.+.+.+.+.++++++.+... +.+|+...+ ..++.++++. +||.+....+.... .
T Consensus 114 R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~~~~~~ 186 (421)
T 3lxh_A 114 RKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFADR-----GHCEFGSEFSTVFPVRVFLA-LAGLPVEDATKLGLLANEM 186 (421)
T ss_dssp HHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTTT-----SEEEHHHHTTTTHHHHHHHH-HHTCCGGGHHHHHHHHHHH
T ss_pred HHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhhc-----CCeehHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHH
Confidence 9998 999999999999999999999999988642 578987666 4566666665 58988765443111 1
Q ss_pred ccccchhhh-hHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHH
Q 048805 165 SNKFDVLSG-LIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIIL 243 (364)
Q Consensus 165 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~ 243 (364)
.....+++. ...+..+....+.+++.++++++++.. .+|+++.|+++..++ ..++++++..++.
T Consensus 187 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~l~~~ei~~~~~ 251 (421)
T 3lxh_A 187 TRPSGNTPEEQGRSLEAANKGFFEYVAPIIAARRGGS------------GTDLITRILNVEIDG---KPMPDDRALGLVS 251 (421)
T ss_dssp HSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------------CCSHHHHHHTSCBTT---BCCCHHHHHHHHH
T ss_pred hccccCCCchhHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHhhhccC---CCCCHHHHHHHHH
Confidence 111111121 246677788888999999998876541 678999999876543 3799999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccccc
Q 048805 244 DMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAE 323 (364)
Q Consensus 244 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~ 323 (364)
.+++||+|||+++++|++++|++||++|+|+++|++ ||+|||+|+||++|++ . ++|.+.+
T Consensus 252 ~l~~AG~eTta~~l~~~l~~L~~~P~~~~~l~~E~~------------------~l~a~i~E~lRl~p~~-~-~~R~~~~ 311 (421)
T 3lxh_A 252 LLLLGGLDTVVNFLGFMMIYLSRHPETVAEMRREPL------------------KLQRGVEELFRRFAVV-S-DARYVVS 311 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHH------------------HHHHHHHHHHHHCCCB-E-EEEEECS
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhCHHHHHHHHhCHH------------------HHHHHHHHHHHhcCcc-C-CceeeCC
Confidence 999999999999999999999999999999999964 8999999999999999 4 5699999
Q ss_pred cccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 324 SLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 324 d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 312 d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 361 (421)
T 3lxh_A 312 DMEFHGTMLKEGDLILLPTALHGLDDRHHDDPMTVDLSRRDVTHSTFAQG 361 (421)
T ss_dssp CEEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCSCCCCCTTCCG
T ss_pred CeeECCEEECCCCEEEEchhhhCCChhhCCCcCeeCCCCCCCCCCCCCCc
Confidence 9999999999999999999999999999987 468999998
No 63
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=100.00 E-value=7.8e-47 Score=336.32 Aligned_cols=304 Identities=13% Similarity=0.138 Sum_probs=246.0
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHHH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKVR 90 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 90 (364)
..+++.++.+|+++ |||+++..++ +.+++++++.+++++.+. +.|++++......... .+...++..+|+.|+++|
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~-~~~~~~~~~~g~~h~~~R 98 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGK-VMQFIPLQQDGAEHKAFR 98 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHH-HHCCTTTTCCHHHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCcccc-ccccCccccCCcHHHHHH
Confidence 56899999999999 9999998874 588999999999999654 5777766322221111 112345667799999999
Q ss_pred HHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHH-HHHhHHHHHhhccCCchhhhhhccccccc
Q 048805 91 KICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLT-VSNNIVSRCVLGRKADEEEKNIGKSNKFD 169 (364)
Q Consensus 91 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~-~~~~~~~~~~fG~~~~~~~~~~~~~~~~~ 169 (364)
+.+ .+.|++..++.+.+.+.+.++++++.+... +.+|+...+.. ++.++++. +||.+....+.... +..
T Consensus 99 ~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~d~~~~~~~~~~~~v~~~-~~G~~~~~~~~~~~---~~~ 168 (396)
T 3oft_A 99 TPV-MKGLASRFVVALEPKVQAVARKLMESLRPR-----GSCDFVSDFAEILPLNIFLT-LIDVPLEDRPRLRQ---LGV 168 (396)
T ss_dssp HHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGGG-----SEEEHHHHTTTTHHHHHHHH-HTTCCGGGHHHHHH---HHH
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhc-----CCccHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHH---HHH
Confidence 998 999999999999999999999999998754 46888776644 55565555 78987655433211 111
Q ss_pred hhh--hhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHHHHH
Q 048805 170 VLS--GLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILDMFV 247 (364)
Q Consensus 170 ~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ 247 (364)
.+. ....+..++...+.+++.++++++++.. ..|+++.|++...++ ..++++++..++..+++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------------~~d~l~~ll~~~~~~---~~l~~~el~~~~~~l~~ 233 (396)
T 3oft_A 169 QLTRPDGSMTVEQLKQAADDYLWPFIEKRMAQP------------GDDLFSRILSEPVGG---RPWTVDEARRMCRNLLF 233 (396)
T ss_dssp HHHSCCSSCCHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHTSCBTT---BCCCHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhccC---CCCCHHHHHHHHHHHHH
Confidence 111 0134566778888999999998887652 679999999876543 37999999999999999
Q ss_pred hcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccccccccc
Q 048805 248 AGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLKW 327 (364)
Q Consensus 248 ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i 327 (364)
||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|++ . ++|.+.+|+++
T Consensus 234 AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~-~-~~R~~~~d~~~ 293 (396)
T 3oft_A 234 GGLDTVAAMIGMVALHLARHPEDQRLLRERP------------------DLIPAAADELMRRYPTV-A-VSRNAVADVDA 293 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHCCCB-E-EEEEESSCEEE
T ss_pred HhhHHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HhHHHHHHHHHHhcCcc-c-CceecCCCEEE
Confidence 9999999999999999999999999999994 38999999999999999 4 56999999999
Q ss_pred cceecCCCcEEEEeeeecccCCCCCCC------------ccccccccC
Q 048805 328 RGYDIPSKTRVIVNAYGQFKGIPKVGT------------SQKISFQTG 363 (364)
Q Consensus 328 ~g~~IpkGt~v~~~~~~~~~d~~~~~~------------~~f~PFg~G 363 (364)
+||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 294 ~g~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~~~~~FG~G 341 (396)
T 3oft_A 294 DGVTIRKGDLVYLPSVLHNLDPASFEAPEEVRFDRGLAPIRHTTMGVG 341 (396)
T ss_dssp TTEEECTTCEEEEETHHHHTCTTTSSSTTSCCSCCCCCGGGSSTTCCG
T ss_pred CCEEECCCCEEEeChHHhCCCcccCCCcCccCCCCCCCCCCcccCCCC
Confidence 999999999999999999999999987 457899998
No 64
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=100.00 E-value=5.9e-47 Score=338.05 Aligned_cols=302 Identities=16% Similarity=0.148 Sum_probs=244.8
Q ss_pred CCCCchHHHHHHHHhC--CeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHH
Q 048805 11 GTLPHRSLKALSERYG--ALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRK 88 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG--~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (364)
..+++.++.+|+ +|| |||++++.| +.|++++++.+++++.+ ...|++++......... .+.+.++..+|+.|++
T Consensus 36 ~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~-~~~~~l~~~~g~~~~~ 111 (415)
T 2zwu_A 36 SAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRHFSSECPFIPREAGE-AYDFIPTSMDPPEQRQ 111 (415)
T ss_dssp GGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTTEETTSCSSSHHHHH-HCCCTTTTCCTTTTHH
T ss_pred ccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccccCCCcccCCCCccc-cccccCccCCCcHHHH
Confidence 457889999996 799 999998433 69999999999999975 34677765211111111 1233044567999999
Q ss_pred HHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhc----
Q 048805 89 VRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIG---- 163 (364)
Q Consensus 89 ~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~---- 163 (364)
+|+.+ .+.|++..++.+.+.+.+.++++++.+... +++|+.+.+ ..+++++++.+ ||.+.++.+....
T Consensus 112 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~-----~~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~ 184 (415)
T 2zwu_A 112 FRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQ-----GQCNFTEDYAEPFPIRIFMLL-AGLPEEDIPHLKYLTDQ 184 (415)
T ss_dssp HHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGG-----TEEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHH
T ss_pred HHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 99998 899999999999999999999999998753 379999865 78999999999 9998865433111
Q ss_pred cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHH
Q 048805 164 KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIIL 243 (364)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~ 243 (364)
....+. +. +..++...+.+++.++++++++.. ..|+++.|++...++ ..++++++..++.
T Consensus 185 ~~~~~~--P~---~~~~~~~~~~~~~~~~i~~r~~~~------------~~dll~~ll~~~~~~---~~l~~~~i~~~~~ 244 (415)
T 2zwu_A 185 MTRPDG--SM---TFAEAKEALYDYLIPIIEQRRQKP------------GTDAISIVANGQVNG---RPITSDEAKRMCG 244 (415)
T ss_dssp HHSCCS--SS---CHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHTCEETT---EECCHHHHHHHHH
T ss_pred HHhccC--HH---HHHHHHHHHHHHHHHHHHHHHhCC------------CCCHHHHHHHhhhcC---CCCCHHHHHHHHH
Confidence 000010 11 456677788889999998877531 568999999875432 3699999999999
Q ss_pred HHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcccccc
Q 048805 244 DMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAE 323 (364)
Q Consensus 244 ~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~ 323 (364)
.+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++. + |.+.+
T Consensus 245 ~l~~AG~dTta~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~-~-R~~~~ 304 (415)
T 2zwu_A 245 LLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERP------------------ERIPAACEELLRRFSLVAD-G-RILTS 304 (415)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHTCCBCC-E-EEESS
T ss_pred HHHHHhHhHHHHHHHHHHHHHHhCHHHHHHHHhCH------------------HHHHHHHHHHHhhcCCcCC-c-eeeCC
Confidence 99999999999999999999999999999999994 3899999999999999995 7 99999
Q ss_pred cccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 324 SLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 324 d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 305 d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~l~FG~G 354 (415)
T 2zwu_A 305 DYEFHGVQLKKGDQILLPQMLSGLDERENACPMHVDFSRQKVSHTTFGHG 354 (415)
T ss_dssp CEEETTEEECTTCEEECCHHHHHHCTTTSSSTTSCCTTCSSCCCCTTCCG
T ss_pred CEEECCEEECCCCEEEeCchhhCCCchhCCCccccCCCCCCCCCCCCCCC
Confidence 9999999999999999999999999999987 358899998
No 65
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=100.00 E-value=1e-46 Score=345.53 Aligned_cols=343 Identities=12% Similarity=0.053 Sum_probs=239.4
Q ss_pred Cccccchhhc----CCCCchHHHHHHHHhCC-eEEEEecCccE-------EEecCHHHHHHHHhhCC----ccccCCCCC
Q 048805 1 SHTWQLHQLL----GTLPHRSLKALSERYGA-LMFVYFGNSPT-------LVVSSAELAGEMFKTHD----IVTSNRPKT 64 (364)
Q Consensus 1 p~lG~~~~~~----~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------vvi~~~~~i~~i~~~~~----~~~~~~~~~ 64 (364)
|++|+++++. ..+++.++.++++|||+ ||++++++.++ +++++++..+.++.... +.+......
T Consensus 37 P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~v~k~~~~~~~~~~ 116 (495)
T 3dsk_A 37 PIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDKVEKKDLLTGTYMP 116 (495)
T ss_dssp TTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSSSCC
T ss_pred CccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccccccccccccccCCC
Confidence 8999998886 58999999999999999 99999998888 66777776665553311 112111111
Q ss_pred CcchhcccCCcceeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHh
Q 048805 65 TPANILLYECRDIGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNN 144 (364)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~ 144 (364)
.. ..........++..+|+.|+++|+++ .+.|++.. +.+.+.+++.++++++.|... ..+++++|+.+++..++++
T Consensus 117 ~~-~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~~~~~~ll~~~~~~-~~~~~~vdl~~~~~~~~~~ 192 (495)
T 3dsk_A 117 ST-ELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQATYSELFDSLEKE-LSLKGKADFGGSSDGTAFN 192 (495)
T ss_dssp CG-GGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHHHHHHHHHHHHHHH-HHHHSSEESHHHHHHHHHH
T ss_pred Cc-cccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-hccCCCccHHHHHHHHHHH
Confidence 11 22111113344556799999999998 88888754 889999999999999999763 2235689999999999999
Q ss_pred HHHHHhhccCCchhhhhhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccC---CCCCCCCCCcccHHHHHH
Q 048805 145 IVSRCVLGRKADEEEKNIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASE---SNDDDNQLDKKDFVDILL 221 (364)
Q Consensus 145 ~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~l~~l~ 221 (364)
+++.++||.+....+..-....++..+... .........+-.++.+++.++++..... .... ......+.++.++
T Consensus 193 ~i~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll 270 (495)
T 3dsk_A 193 FLARAFYGTNPADTKLKADAPGLITKWVLF-NLHPLLSIGLPRVIEEPLIHTFSLPPALVKSDYQR-LYEFFLESAGEIL 270 (495)
T ss_dssp HHHHHHHSCCGGGSTTTTCHHHHHHHHHHH-HHGGGCCCSSCHHHHHHHHSSSCCCGGGGHHHHHH-HHHHHHHHCHHHH
T ss_pred HHHHHHcCCCcchhhhhhhHHHHHHHHHHH-hhhhHhHhccHHHHHHHHHHhhcccchhhhhhHHH-HHHHHHHHHHHHH
Confidence 999999999876542100000000000000 0000000000022222222211100000 0000 0000112224445
Q ss_pred hhhhcCccccccCHHHHHHHHHHHH-HhcccchHHHHHHHHHHHhh-CchHHHHHHHHHHHhhcCC-CCCChhhcccchh
Q 048805 222 QLRKDGMLVAELSQDNLKAIILDMF-VAGTDSTTTTLEWAMAELVK-NPTSMKRAREEVRSVAKGK-LNINMKEIEKMEY 298 (364)
Q Consensus 222 ~~~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~~-~~~~~~~l~~l~~ 298 (364)
+...+ .++++++++.+++.++ +||++||+++++|++++|+. ||++|++||+|++++++++ +.++++++++|||
T Consensus 271 ~~~~~----~~l~~~ei~~~~~~~l~~ag~~tt~~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~~~lp~ 346 (495)
T 3dsk_A 271 VEADK----LGISREEATHNLLFATCFNTWGGMKILFPNMVKRIGRAGHQVHNRLAEEIRSVIKSNGGELTMGAIEKMEL 346 (495)
T ss_dssp HHHHH----TTCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTTCCCHHHHHTCHH
T ss_pred HHHHh----CCCCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHH
Confidence 44432 3789999998776665 99999999999999999996 9999999999999998764 6789999999999
Q ss_pred HHHHHhhhccCCCCCCcCCccccccccccc----ceecCCCcEEEEeeeecccCCCCCCC
Q 048805 299 LKCVVKETLRLHPPAPLLLPREIAESLKWR----GYDIPSKTRVIVNAYGQFKGIPKVGT 354 (364)
Q Consensus 299 L~a~i~E~lRl~p~~~~~~~R~~~~d~~i~----g~~IpkGt~v~~~~~~~~~d~~~~~~ 354 (364)
|+|||+|+||++|+++... |++.+|++++ ||.||||+.|+++.+++||||++|++
T Consensus 347 l~a~i~E~lRl~p~~~~~~-r~a~~d~~l~~~~~g~~IpkG~~v~~~~~~~~~dp~~~~d 405 (495)
T 3dsk_A 347 TKSVVYECLRFEPPVTAQY-GRAKKDLVIESHDAAFKVKAGEMLYGYQPLATRDPKIFDR 405 (495)
T ss_dssp HHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHHHTCTTTSTT
T ss_pred HHHHHHHHHhcCCCccccc-eeecCCeEeccCCCceEECCCCEEEeccHHhhCCcccCCC
Confidence 9999999999999999987 7799999994 99999999999999999999999987
No 66
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=100.00 E-value=5.6e-47 Score=345.69 Aligned_cols=327 Identities=12% Similarity=0.080 Sum_probs=225.6
Q ss_pred CccccchhhcCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCC-cchhcccCCcceee
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTT-PANILLYECRDIGF 79 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (364)
|++||++.+ ..+++.++.+|+++||+||++++++.+++++++|+.+++++.++.. ++.++... ..... .+.+.+
T Consensus 28 P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~~~~~--~g~~~~- 102 (475)
T 3b98_A 28 PWLGHALEF-GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVLMKRI--FNMILP- 102 (475)
T ss_dssp TTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHHHHHT--TCCCCT-
T ss_pred chHHhHHHH-hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHHHHHH--hCCCCC-
Confidence 789999998 6789999999999999999999999999999999999999976532 32221110 11111 133333
Q ss_pred ccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhh-hcCCccccHHHHHHHHHHhHHHHHhhccCCchh
Q 048805 80 ANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLC-FNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEE 158 (364)
Q Consensus 80 ~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~ 158 (364)
..+++.| |+.+ .+.|++..++.+.+.+.+.+.++++.+.... ......+++...+..+++++++...||.+....
T Consensus 103 ~~~~~~~---R~~~-~~~f~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 178 (475)
T 3b98_A 103 SHNPESE---KKRA-EMHFQGASLTQLSNSMQNNLRLLMTPSEMGLKTSEWKKDGLFNLCYSLLFKTGYLTVFGAENNNS 178 (475)
T ss_dssp TCCHHHH---HHHH-HHHTSHHHHHHHHHHHHHHHHHHSSTTTTTCSSCSCEEEEHHHHHHHHHHHHHHHHHHCCTTSCH
T ss_pred CCChHHH---HHHH-HHHcChhhHHHHHHHHHHHHHHHHhhcccccCCCCceeehHHHHHHHHHHHHhhhheeCCccccc
Confidence 3445544 5665 7789999999999999999888887764321 112346789999999999999999999653221
Q ss_pred hh---hhc-cccccchhhhhH-----HHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCcc
Q 048805 159 EK---NIG-KSNKFDVLSGLI-----GRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGML 229 (364)
Q Consensus 159 ~~---~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 229 (364)
+. ... ...+...++... ....+......+.+.+.+ .+.... .. ....|+++.+++...+++
T Consensus 179 ~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~-----~~~~d~l~~ll~~~~~~~- 248 (475)
T 3b98_A 179 AALTQIYEEFRRFDKLLPKLARTTVNKEEKQIASAAREKLWKWL---TPSGLD-RK-----PREQSWLGSYVKQLQDEG- 248 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHH---SCTTSC-CC-----CCTTSHHHHHHHHHHHTT-
T ss_pred hhcHHHHHHHHHHHhhhHHHHHHhcChhhhHHHHHHHHHHHHHH---HHHHhh-cc-----ccccHHHHHHHHHHHHcC-
Confidence 11 000 000000011000 000111111111111111 111111 11 126799999997755432
Q ss_pred ccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccC
Q 048805 230 VAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRL 309 (364)
Q Consensus 230 ~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl 309 (364)
.++++++. +++.+++||+|||+++++|++++|++||++|+|||+|++ .+ ...++.+++++||||+|||+|+||+
T Consensus 249 --~~~~~~i~-~~~~~l~ag~~TTa~~l~~~l~~L~~~P~~~~~l~~Ei~--~~-~~~~~~~~~~~lpyl~a~i~E~lRl 322 (475)
T 3b98_A 249 --IDAEMQRR-AMLLQLWVTQGNAGPAAFWVMGYLLTHPEALRAVREEIQ--GG-KHLRLEERQKNTPVFDSVLWETLRL 322 (475)
T ss_dssp --CCHHHHHH-HHHHHHHHHHSSHHHHHHHHHHHHHTCHHHHHHHHHHHC---------------CCHHHHHHHHHHHHH
T ss_pred --CCHHHHHH-HHHHHHHHccccHHHHHHHHHHHHHcCHHHHHHHHHHHh--cC-CCCCCHHHHhcCHHHHHHHHHHHhc
Confidence 57788888 999999999999999999999999999999999999999 22 2346899999999999999999999
Q ss_pred CCCCCcCCcccccccccc-----cceecCCCcEEEEeeee-cccCCCCCCC
Q 048805 310 HPPAPLLLPREIAESLKW-----RGYDIPSKTRVIVNAYG-QFKGIPKVGT 354 (364)
Q Consensus 310 ~p~~~~~~~R~~~~d~~i-----~g~~IpkGt~v~~~~~~-~~~d~~~~~~ 354 (364)
+|+ +. ++|.+.+|+++ +||.||||+.|+++.++ +||||++|++
T Consensus 323 ~p~-~~-~~R~~~~d~~l~~~~g~g~~Ip~Gt~V~~~~~~~~~rdp~~~~d 371 (475)
T 3b98_A 323 TAA-AL-ITRDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQ 371 (475)
T ss_dssp HEE-EC-EEEEECSCEEEECTTSCEEEECTTCEEEECTCCCCCTCTTTSSS
T ss_pred CCc-cc-eeEEecCCeEeecCCCCeEEECCCCEEEeCcHHHhcCChhhcCC
Confidence 986 65 56999999999 89999999999999999 9999999977
No 67
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=100.00 E-value=2.7e-46 Score=332.32 Aligned_cols=302 Identities=17% Similarity=0.186 Sum_probs=236.9
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCcccc-C-CCCC--Ccch--hccc-CCcceeeccC
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTS-N-RPKT--TPAN--ILLY-ECRDIGFANY 82 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~~ 82 (364)
..+++.++.+| ++|||||++++ ++.+.|++++++.+++++.++ .|+ + ++.. .... .+.. .+.++++.
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI-- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH--
Confidence 57899999999 99999999997 789999999999999999765 355 4 3321 1110 0110 12333333
Q ss_pred ChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhh
Q 048805 83 GEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKN 161 (364)
Q Consensus 83 ~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~ 161 (364)
.|+++|+.+ .+.|++. ++.+.+.+.+.++++++.+... ++++|+.+.+ ..+++++++. +||.+.++.+..
T Consensus 90 --~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~----~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~~~~~ 160 (396)
T 1n40_A 90 --ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITE----GAPADLRNDFADPLATALHCK-VLGIPQEDGPKL 160 (396)
T ss_dssp --HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHH----CSCEETTTTTHHHHHHHHHHH-HHTCCGGGHHHH
T ss_pred --HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhc----CCCccHHHHHHHHhHHHHHHH-HhCCChhhHHHH
Confidence 899999998 8999999 9999999999999999999751 4689998665 4799999998 899987654331
Q ss_pred hc----cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhh-hcCccccccCHH
Q 048805 162 IG----KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLR-KDGMLVAELSQD 236 (364)
Q Consensus 162 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~~~~~~~~~ 236 (364)
.. ........+ .++..++...+ +++.++++ . . .. ..|+++.|++.. .++ +..++++
T Consensus 161 ~~~~~~~~~~~~~~p--~~~~~~~~~~~-~~~~~~i~----~--~---~~-----~~dll~~ll~~~~~~~--~~~l~~~ 221 (396)
T 1n40_A 161 FRSLSIAFMSSADPI--PAAKINWDRDI-EYMAGILE----N--P---NI-----TTGLMGELSRLRKDPA--YSHVSDE 221 (396)
T ss_dssp HHTHHHHTBCCSSCC--HHHHHHHHHHH-HHHHHHHH----C--T---TC-----CSHHHHHHHHHHTSGG--GTTSCHH
T ss_pred HHHHHHHhccccCCC--HHHHHHHHHHH-HHHHHHHh----C--C---CC-----CCCHHHHHHHhhcccc--cCCCCHH
Confidence 11 111110011 13455556666 66666665 1 1 11 478999999875 211 1369999
Q ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcC
Q 048805 237 NLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLL 316 (364)
Q Consensus 237 ~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~ 316 (364)
++..++..+++||+|||+++++|++++|++||++|+|+++|+ .||+|||+|+||++|+++..
T Consensus 222 ~i~~~~~~~~~AG~dTt~~~l~~~l~~L~~~P~~~~~l~~E~------------------~~l~a~i~E~lRl~p~~~~~ 283 (396)
T 1n40_A 222 LFATIGVTFFGAGVISTGSFLTTALISLIQRPQLRNLLHEKP------------------ELIPAGVEELLRINLSFADG 283 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHCG------------------GGHHHHHHHHHHTCCCBCSC
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcChHHHHHHHhCH------------------HHHHHHHHHHHhhCCCcccc
Confidence 999999999999999999999999999999999999999993 58999999999999999966
Q ss_pred CcccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------ccccccccC
Q 048805 317 LPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-----------SQKISFQTG 363 (364)
Q Consensus 317 ~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-----------~~f~PFg~G 363 (364)
++|.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 284 ~~R~~~~d~~~~G~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~~~~FG~G 341 (396)
T 1n40_A 284 LPRLATADIQVGDVLVRKGELVLVLLEGANFDPEHFPNPGSIELDRPNPTSHLAFGRG 341 (396)
T ss_dssp EEEEESSCEEETTEEECTTCEEEECHHHHHTCTTTSSSTTSCCTTCSSTTCSSTTCCG
T ss_pred cceecCCCeeECCEEECCCCEEEechHHhhCChhhCCChhhCCCCCCCCCCCCCCCCC
Confidence 77999999999999999999999999999999999987 257899998
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=100.00 E-value=1.9e-45 Score=329.41 Aligned_cols=309 Identities=14% Similarity=0.156 Sum_probs=245.4
Q ss_pred CCCCchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhhCCccccCCCC---CCcch-----hcccCCcceeecc
Q 048805 11 GTLPHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKTHDIVTSNRPK---TTPAN-----ILLYECRDIGFAN 81 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~ 81 (364)
..+++.++.+++++ |||+++.. ++.++++|++++.+++++++. ..|+.++. ..... .........++..
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM 114 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCccccc
Confidence 35689999999886 99999987 467799999999999999765 44554431 11111 0011123445677
Q ss_pred CChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhh
Q 048805 82 YGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEK 160 (364)
Q Consensus 82 ~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~ 160 (364)
+|+.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+. .++++|+...+ ..++.++++. +||.+..+.+.
T Consensus 115 dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~-----~~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~~~~ 187 (426)
T 3rwl_A 115 DRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLP-----VGEEFDWVDRVSIEITTQMLAT-LFDFPFEERRK 187 (426)
T ss_dssp CTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSC-----SSSCEEHHHHTHHHHHHHHHHH-HHTCCGGGTHH
T ss_pred CchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhh-----cCCCcchHHHHHHHHHHHHHHH-HcCCCHHHHHH
Confidence 899999999998 9999999999999999999999999873 45789988877 5677777775 89987655433
Q ss_pred hhc------cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccC
Q 048805 161 NIG------KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELS 234 (364)
Q Consensus 161 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 234 (364)
... ...... ......+..+....+.+++.++++++.+. .. .+|+++.|+++..++ .++
T Consensus 188 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~~-----~~dll~~ll~~~~~~----~ls 251 (426)
T 3rwl_A 188 LTRWSDVTTAAPGGG-VVESWDQRKTELLECAAYFQVLWNERVNK------DP-----GNDLISMLAHSPATR----NMT 251 (426)
T ss_dssp HHHHHHHHTCCTTSS-SCSSHHHHHHHHHHHHHHHHHHHHHHHTS------CC-----CSSHHHHHHHCGGGG----GCC
T ss_pred HHHHHHHHHhccCcc-ccccHHHHHHHHHHHHHHHHHHHHHHhhc------CC-----CCCHHHHHHhcccCC----CCC
Confidence 111 111000 01223445566788888888888877321 12 679999999876543 589
Q ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCC
Q 048805 235 QDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAP 314 (364)
Q Consensus 235 ~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~ 314 (364)
+++++.++..+++||+|||+++++|++++|+.||++|+|+++| ++||+|||+|+||++|+++
T Consensus 252 ~~el~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~lr~E------------------~~~l~a~i~E~LRl~p~~~ 313 (426)
T 3rwl_A 252 PEEYLGNVLLLIVGGNDTTRNSMTGGVLALHKNPDQFAKLKAN------------------PALVETMVPEIIRWQTPLA 313 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHHHHHCSBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHhC------------------hHhHHHHHHHHHHhcCccc
Confidence 9999999999999999999999999999999999999999999 4699999999999999999
Q ss_pred cCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------ccccccccC
Q 048805 315 LLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-----------SQKISFQTG 363 (364)
Q Consensus 315 ~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-----------~~f~PFg~G 363 (364)
. ++|.+.+|++++|+.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 314 ~-~~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~f~dP~~F~p~R~~~~~~l~FG~G 372 (426)
T 3rwl_A 314 H-MRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDRPRPRQHLSFGFG 372 (426)
T ss_dssp C-EEEEESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSCTTCCSTTCCS
T ss_pred c-CceecCCCeEECCEEECCCCEEEechHHhCCCccccCCcCccCCCCCCCCCccCCCCC
Confidence 8 56999999999999999999999999999999999987 468999998
No 69
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=100.00 E-value=1.3e-45 Score=336.41 Aligned_cols=341 Identities=11% Similarity=0.072 Sum_probs=235.4
Q ss_pred Cccccchhhc----CC-CCchHHHHHHHHhCC-eEEEEecCc-------cEEEecCHHHHHHHHhh----CCccccCCCC
Q 048805 1 SHTWQLHQLL----GT-LPHRSLKALSERYGA-LMFVYFGNS-------PTLVVSSAELAGEMFKT----HDIVTSNRPK 63 (364)
Q Consensus 1 p~lG~~~~~~----~~-~~~~~~~~~~~~yG~-v~~~~~~~~-------~~vvi~~~~~i~~i~~~----~~~~~~~~~~ 63 (364)
|++|+++++. .. +++.++.+++++||+ ||++++++. .+|++++.+..+.++.. +...+.....
T Consensus 18 P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (473)
T 3dan_A 18 PFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYM 97 (473)
T ss_dssp TTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTTTEECSSCTTSSSC
T ss_pred cchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCcceecccccccccc
Confidence 7899998864 45 889999999999999 999998743 44455555544444421 1111111111
Q ss_pred CCcchhcccCCcceeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHH
Q 048805 64 TTPANILLYECRDIGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSN 143 (364)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~ 143 (364)
. ............++..+++.|+++|+++ .+.|+++ ++.+.+.+.+.++++++.|... ..+++++|+.+++..+++
T Consensus 98 ~-~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~~~~~~ll~~~~~~-~~~~~~vdl~~~~~~~~~ 173 (473)
T 3dan_A 98 P-STKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFETTYTELFEGLEAE-LAKNGKAAFNDVGEQAAF 173 (473)
T ss_dssp C-CGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHSCEECHHHHHHHHH
T ss_pred C-CccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-hccCCcccHHHHHHHHHH
Confidence 1 1111111112345567799999999998 8999985 8999999999999999999763 223468999999999999
Q ss_pred hHHHHHhhccCCchhhhhhccccccchhhh-hH--HHHhHhHHHHHHHHHHHHHHHHhhhccCCCCC--CCCCCcccHHH
Q 048805 144 NIVSRCVLGRKADEEEKNIGKSNKFDVLSG-LI--GRLNTTARALDALLDEVIEEHTNKAASESNDD--DNQLDKKDFVD 218 (364)
Q Consensus 144 ~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~l~ 218 (364)
++++.++||.+....+. ...+..+.. +. .........+-.++..++.++++......... +......++++
T Consensus 174 ~~i~~~~~G~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (473)
T 3dan_A 174 RFLGRAYFNSNPEETKL----GTSAPTLISSWVLFNLAPTLDLGLPWFLQEPLLHTFRLPAFLIKSTYNKLYDYFQSVAT 249 (473)
T ss_dssp HHHHHHHHSCCGGGSTT----TTCHHHHHHHHHHHHHGGGCCCSCCHHHHHHHHSSSCCCGGGTHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHcCCCCCchhh----hhhHHHHHHHHHHHhccchhhhcchHHHHHHHhhhccchHhhhhhchhhhHHHHHHHHH
Confidence 99999999998876211 000000000 00 00000000001222222221110000000000 00000124444
Q ss_pred HHHhhhhcCccccccCHHHHHHHHHHHH-HhcccchHHHHHHHHHHHhh-CchHHHHHHHHHHHhhcC-C-CCCChhhcc
Q 048805 219 ILLQLRKDGMLVAELSQDNLKAIILDMF-VAGTDSTTTTLEWAMAELVK-NPTSMKRAREEVRSVAKG-K-LNINMKEIE 294 (364)
Q Consensus 219 ~l~~~~~~~~~~~~~~~~~i~~~~~~~~-~ag~~tt~~~l~~~l~~L~~-~p~~~~~l~~Ei~~~~~~-~-~~~~~~~l~ 294 (364)
.+++...+ ..+++++++.+++.++ ++|++||+++++|++++|++ ||++|++||+|+++++++ . ..++.++++
T Consensus 250 ~ll~~~~~----~~l~~~ei~~~~l~~~g~~~~~tta~~l~~~l~~L~~~~P~~~~~lr~Ei~~~~~~~~~~~~~~~~l~ 325 (473)
T 3dan_A 250 PVMEQAEK----LGVPKDEAVHNILFAVCFNTFGGVKILFPNTLKWIGLAGENLHTQLAEEIRGAIKSYGDGNVTLEAIE 325 (473)
T ss_dssp HHHHHHHH----HTCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHSTTSCCHHHHH
T ss_pred HHHHhHhh----cCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcccCCCCCHHHHh
Confidence 56654433 3799999998886666 78888899999999999999 899999999999999765 3 678999999
Q ss_pred cchhHHHHHhhhccCCCCCCcCCcccccccccc----cceecCCCcEEEEeeeecccCCCCCCC
Q 048805 295 KMEYLKCVVKETLRLHPPAPLLLPREIAESLKW----RGYDIPSKTRVIVNAYGQFKGIPKVGT 354 (364)
Q Consensus 295 ~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~i----~g~~IpkGt~v~~~~~~~~~d~~~~~~ 354 (364)
+||||+|||+|+||++|+++... |++.+|+++ +||.||||+.|+++.+++||||++|++
T Consensus 326 ~lp~l~a~i~E~lRl~p~~~~~~-r~~~~d~~l~~~~~g~~Ip~G~~v~~~~~~~~~dp~~~~d 388 (473)
T 3dan_A 326 QMPLTKSVVYESLRIEPPVPPQY-GKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFDR 388 (473)
T ss_dssp TCHHHHHHHHHHHHHSCSSCEEE-EEESSCEEEECSSCEEEECTTCEEEEEHHHHTTCTTTSSS
T ss_pred cCchHHHHHHHHHhcCCCccccc-ccccCCcEeecCCCceEeCCCCEEEechHHhhCCchhcCC
Confidence 99999999999999999999987 779999999 999999999999999999999999987
No 70
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=100.00 E-value=1.2e-45 Score=329.98 Aligned_cols=306 Identities=17% Similarity=0.218 Sum_probs=243.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCC-c-----chhcccCCcceeeccCCh
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTT-P-----ANILLYECRDIGFANYGE 84 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~ 84 (364)
..+|+.+ ++.++|||++++.+++.. ++|++++.++++++++. ++...... . ...........++..+|+
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 106 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGA 106 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHH
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCch
Confidence 5678888 555679999999887666 99999999999998763 22111000 0 000000012355677899
Q ss_pred hHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhc
Q 048805 85 YWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIG 163 (364)
Q Consensus 85 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~ 163 (364)
.|+++|+++ .+.|++..++.+.+.+.+.++++++.+ . . +.+|+...+ ..++.++++. +||.+..+.+....
T Consensus 107 ~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l-~----~-g~~d~~~~~~~~~~~~vi~~-l~G~~~~~~~~~~~ 178 (416)
T 3p3o_A 107 DHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKL-P----Q-GDFDFVQHFPHPLPALVMCQ-LLGFPLEDYDTVGR 178 (416)
T ss_dssp HHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTC-C----S-SSEEHHHHTTTHHHHHHHHH-HHTCCGGGHHHHHH
T ss_pred HHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhh-c----c-CCccHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHH
Confidence 999999998 899999999999999999999999988 4 2 359976655 5699999998 58988765433111
Q ss_pred ----cccccc--hhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHH
Q 048805 164 ----KSNKFD--VLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDN 237 (364)
Q Consensus 164 ----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 237 (364)
....+. .......+..++...+.+++.++++++++.. .+|+++.|+++..++ .+++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------------~~dll~~ll~~~~~~----~ls~~e 242 (416)
T 3p3o_A 179 LSIETNLGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEP------------GDDLTSDIVRAFHDG----VLDDYE 242 (416)
T ss_dssp HHHTTCGGGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHHTT----SSCHHH
T ss_pred HHHHHHhhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHhCC------------CccHHHHHHHhhccC----CCCHHH
Confidence 111111 1123456677888889999999998887642 678999999876653 799999
Q ss_pred HHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCC
Q 048805 238 LKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLL 317 (364)
Q Consensus 238 i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~ 317 (364)
+..++..+++||+|||+++++|++++|++||++|+|+++|+ .|+++||+|+||++|++|...
T Consensus 243 l~~~~~~l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~a~i~E~lRl~p~~~~~~ 304 (416)
T 3p3o_A 243 LRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENP------------------ELAPQAVEEVLRWSPTLPVTA 304 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCG------------------GGHHHHHHHHHHHSCSCSSCC
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHCHHHHHHHHhCH------------------HHHHHHHHHHHhhccccccCc
Confidence 99999999999999999999999999999999999999994 389999999999999997777
Q ss_pred cccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------ccccccccC
Q 048805 318 PREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-----------SQKISFQTG 363 (364)
Q Consensus 318 ~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-----------~~f~PFg~G 363 (364)
+|.+.+|++++|+.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 305 ~R~~~~d~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dp~~F~p~R~~~~~~l~FG~G 361 (416)
T 3p3o_A 305 TRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFADADRFDITVKREAPSIAFGGG 361 (416)
T ss_dssp EEEESSCEEETTEEECTTCEEEECHHHHTTCTTTCTTTTSCCTTCCCSSCCCTTCCS
T ss_pred ceEeCCCeEECCEEECCCCEEEEChHHhcCChhccCCccccCCCCCCCCCeecCCCC
Confidence 8999999999999999999999999999999999987 238999998
No 71
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=100.00 E-value=3.6e-44 Score=315.63 Aligned_cols=290 Identities=17% Similarity=0.192 Sum_probs=227.3
Q ss_pred CchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCC--CCcch-----h--cccCCcceeeccCCh
Q 048805 14 PHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPK--TTPAN-----I--LLYECRDIGFANYGE 84 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~--~~~~~-----~--~~~~~~~~~~~~~~~ 84 (364)
|+..+.++ ++||||+++ | +.+++++++.+++++.+. ..|++++. ..... . ........++..+|+
T Consensus 1 p~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 74 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPP 74 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTT
T ss_pred CCHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCCh
Confidence 45678888 589999987 3 589999999999999864 46776653 10011 1 110010334556799
Q ss_pred hHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhc
Q 048805 85 YWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIG 163 (364)
Q Consensus 85 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~ 163 (364)
.|+++|+.+ .+.|++..++.+.+.+.+.++++++.+ .. +++|+.+.+ ..+++++++.+ ||.+.++.+....
T Consensus 75 ~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l-~~-----g~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~ 146 (368)
T 1io7_A 75 LHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSI-DP-----REDDIVKKLAVPLPIIVISKI-LGLPIEDKEKFKE 146 (368)
T ss_dssp HHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTC-CT-----TSEEHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHH
T ss_pred HHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHh-hc-----CCccHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHH
Confidence 999999998 899999999999999999999999998 42 369999876 78999999999 9998765433111
Q ss_pred ccccc-ch--hhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHH
Q 048805 164 KSNKF-DV--LSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKA 240 (364)
Q Consensus 164 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~ 240 (364)
+...+ .. .+...++..++...+.+++.+++ .. ..|+++.|++. .++++++..
T Consensus 147 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i-------~~----------~~d~l~~ll~~--------~l~~~ei~~ 201 (368)
T 1io7_A 147 WSDLVAFRLGKPGEIFELGKKYLELIGYVKDHL-------NS----------GTEVVSRVVNS--------NLSDIEKLG 201 (368)
T ss_dssp HGGGCTTSCCCTTCHHHHHHHHHHHHHHHHHHT-------TS----------SCHHHHHHHTS--------SCCHHHHHH
T ss_pred HHHHHHhccCChHHHHHHHHHHHHHHHHHHHHh-------CC----------CCCHHHHHHhc--------cCCHHHHHH
Confidence 10000 00 01112344455555666665555 11 56899999965 478999999
Q ss_pred HHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccc
Q 048805 241 IILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPRE 320 (364)
Q Consensus 241 ~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~ 320 (364)
++..+++||+|||+++++|++++|++|| +|+|+++| + |++|||+|+||++|+++ .++|.
T Consensus 202 ~~~~l~~AG~dTt~~~l~~~l~~L~~~P-~~~~l~~E-~------------------~l~a~i~E~lRl~p~~~-~~~R~ 260 (368)
T 1io7_A 202 YIILLLIAGNETTTNLISNSVIDFTRFN-LWQRIREE-N------------------LYLKAIEEALRYSPPVM-RTVRK 260 (368)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHTT-CHHHHHHH-T------------------CHHHHHHHHHHHSCSBC-CEEEE
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhCh-HHHHHHhc-c------------------hHHHHHHHHHHhCcccc-cCcee
Confidence 9999999999999999999999999999 99999999 2 78999999999999999 56799
Q ss_pred ccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 321 IAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 321 ~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 261 ~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dP~~F~PeR~~~~~~~FG~G 313 (368)
T 1io7_A 261 TKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNPHLSFGSG 313 (368)
T ss_dssp ESSCEEETTEEECTTCEEEECHHHHTTCTTTSTTTTSCCTTCCSCCCCTTCCG
T ss_pred eCCCeeECCEEECCCCEEEecHhhhCCChhhCCCcceeCCCCCCCCCcCCCCC
Confidence 9999999999999999999999999999999987 358899998
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=100.00 E-value=4.9e-44 Score=314.39 Aligned_cols=289 Identities=14% Similarity=0.141 Sum_probs=227.2
Q ss_pred CchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCC--cch----hcccCC---cceeeccCCh
Q 048805 14 PHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTT--PAN----ILLYEC---RDIGFANYGE 84 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~--~~~----~~~~~~---~~~~~~~~~~ 84 (364)
|+..+.+++ +||||+++. | .+++++++.+++++.+. ..|++++... ... .....+ ...++..+|+
T Consensus 1 p~~~~~~lr-~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 74 (367)
T 3b4x_A 1 MYDWFKQMR-KESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPP 74 (367)
T ss_dssp CHHHHHHHH-HHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTT
T ss_pred CCHHHHHHH-HcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCch
Confidence 456777774 799999887 3 89999999999999865 4677664321 110 101112 1334556799
Q ss_pred hHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhc
Q 048805 85 YWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIG 163 (364)
Q Consensus 85 ~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~ 163 (364)
.|+++|+.+ .+.|++..++. +.+.+.++++++.+. | .+|+...+ ..+++++++. +||.+ ++.+....
T Consensus 75 ~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~------g-~~d~~~~~~~~~~~~vi~~-~~G~~-~~~~~~~~ 142 (367)
T 3b4x_A 75 LHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELD------E-EFDVIESFAIPLPILVISK-MLGIN-PDVKKVKD 142 (367)
T ss_dssp HHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCC------S-EEEHHHHTTTHHHHHHHHH-HHTCC-CCHHHHHH
T ss_pred hHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhcc------C-CcchHHHHHHhhHHHHHHH-HcCCC-CcHHHHHH
Confidence 999999998 99999999888 999999999988764 3 49999765 7999999999 79998 53322111
Q ss_pred ----cccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHH
Q 048805 164 ----KSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLK 239 (364)
Q Consensus 164 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~ 239 (364)
....+...+....+. ++...+.+++.++++++++. . .+|+++.|+++ .++++++.
T Consensus 143 ~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~~i~~r~~~-------~-----~~dll~~ll~~--------~ls~~el~ 201 (367)
T 3b4x_A 143 WSDLVALRLGRADEIFSIG-RKYLELISFSKKELDSRKGK-------E-----IVDLTGKIANS--------NLSELEKE 201 (367)
T ss_dssp HHHHHHTTTTSTTGGGCCC-HHHHHHHHHHHHHHHHHTTT-------C-----CSSHHHHHHTS--------SSCHHHHH
T ss_pred HHHHHHhccCCChhhHHHH-HHHHHHHHHHHHHHHHHhcC-------C-----CCCHHHHHHhc--------cCCHHHHH
Confidence 000011112222223 66777888888888876542 1 56899999975 48999999
Q ss_pred HHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCcc
Q 048805 240 AIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPR 319 (364)
Q Consensus 240 ~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R 319 (364)
.++..+++||+|||+++++|++++|++ |++|+|+++|++ +|||+|+||++|+++ .++|
T Consensus 202 ~~~~~l~~AG~eTt~~~l~~~l~~L~~-P~~~~~l~~e~~--------------------~a~i~E~lRl~p~~~-~~~R 259 (367)
T 3b4x_A 202 GYFILLMIAGNETTTNLIGNAIEDFTL-YNSWDYVREKGA--------------------LKAVEEALRFSPPVM-RTIR 259 (367)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHHHH-TTCHHHHHHHCS--------------------HHHHHHHHHHSCSBC-CEEE
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHhC-HHHHHHHHhCCc--------------------hHHHHHHHHhcCccc-CeeE
Confidence 999999999999999999999999999 999999999942 899999999999999 5679
Q ss_pred cccccccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 320 EIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 320 ~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
.+.+|++++||.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 260 ~~~~d~~l~g~~Ip~Gt~V~~~~~~~~rdp~~~~dp~~F~PeR~~~~~l~FG~G 313 (367)
T 3b4x_A 260 VTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFIPDRTPNPHLSFGSG 313 (367)
T ss_dssp EESSCEEETTEEECTTCEEEECHHHHTTCTTTSSSTTSCCTTCSSCCCCTTCCS
T ss_pred EeCCCeEECCEEECCCCEEEEChhhhcCCcccCCCccccCCCCCCCCCcCCCCC
Confidence 99999999999999999999999999999999987 368999998
No 73
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=100.00 E-value=6.2e-44 Score=316.73 Aligned_cols=305 Identities=16% Similarity=0.203 Sum_probs=240.3
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHHH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKVR 90 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R 90 (364)
..+++.++.+++++ |||+++..+ .+++++++.+++++.+. .|+.++......... .+...++..+|+.|+++|
T Consensus 19 ~~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~-~~~~~l~~~dg~~h~~~R 91 (394)
T 2wiy_A 19 RNNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWA-VASDTALGSDPPHHTVLR 91 (394)
T ss_dssp HHCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGG-GGGGSGGGCCTTHHHHHH
T ss_pred ccCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--Cccccccccccccch-hcccccccCCchHHHHHH
Confidence 45789999988664 899977532 78999999999999653 344321100001111 112345677899999999
Q ss_pred HHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhhhhc-----c-
Q 048805 91 KICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEKNIG-----K- 164 (364)
Q Consensus 91 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~-----~- 164 (364)
+.+ .+.|+++.++.+.+.+.+.++++++.+. .++++|+.+.+..++.++++..+||.+.++.+.... .
T Consensus 92 ~~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~-----~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~ 165 (394)
T 2wiy_A 92 RQT-NKWFTPKLVDGWVRTTRELVGDLLDGVE-----AGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAML 165 (394)
T ss_dssp HHH-HTTCSHHHHHHHTHHHHHHHHHHHHTCC-----TTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHG
T ss_pred HHH-HhccCHHHHHHHHHHHHHHHHHHHHHHh-----ccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHH
Confidence 998 9999999999999999999999998764 346899999999999999999999998754332111 0
Q ss_pred ccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHH
Q 048805 165 SNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILD 244 (364)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ 244 (364)
............+...+...+.+++.++++++++.. .+|+++.|++...++ .++++++.+++..
T Consensus 166 ~~~~~p~~~~~~~~~~~~~~l~~~~~~~i~~rr~~~------------~~dll~~Ll~~~~~~----~ls~~el~~~~~~ 229 (394)
T 2wiy_A 166 MQSAEPADGDVDRAAVAFGYLSARVAEMLEDKRVNP------------GDGLADSLLDAARAG----EITESEAIATILV 229 (394)
T ss_dssp GGSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHSC------------CSSHHHHHHHHHHTT----SSCHHHHHHHHHH
T ss_pred hccCCccchHHHHHHHHHHHHHHHHHHHHHHhhcCC------------CCcHHHHHHHhhhcC----CCCHHHHHHHHHH
Confidence 000000011223445566778888888888776431 458999999876432 5999999999999
Q ss_pred HHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccccc
Q 048805 245 MFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAES 324 (364)
Q Consensus 245 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d 324 (364)
+++||+|||+++++|++++|++||++|+++++| .+|++|||+|+||++|+++. .+|.+.+|
T Consensus 230 l~~AG~eTTa~~l~~~l~~L~~~P~~~~~l~~e------------------~~~l~a~i~E~LRl~pp~~~-~~R~~~~d 290 (394)
T 2wiy_A 230 FYAVGHMAIGYLIASGIELFARRPEVFTAFRND------------------ESARAAIINEMVRMDPPQLS-FLRFPTED 290 (394)
T ss_dssp HHHHTTTHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHHHHSCSBCE-EEEEESSC
T ss_pred HHHhhhhhHHHHHHHHHHHHHHCHHHHHHHHhC------------------hHhHHHHHHHHHhhCCCccC-eeEEECCC
Confidence 999999999999999999999999999999998 36899999999999999986 45999999
Q ss_pred ccccceecCCCcEEEEeeeecccCCCCCCC------------ccccccccC
Q 048805 325 LKWRGYDIPSKTRVIVNAYGQFKGIPKVGT------------SQKISFQTG 363 (364)
Q Consensus 325 ~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~------------~~f~PFg~G 363 (364)
++++|+.||||+.|+++.+++||||++|++ ..++|||.|
T Consensus 291 ~~l~G~~Ip~G~~V~~~~~~~~rdp~~~~dP~~F~p~R~~~~~~~l~FG~G 341 (394)
T 2wiy_A 291 VEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHTRPPAASRNLSFGLG 341 (394)
T ss_dssp EEETTEEECTTCCEEEEHHHHTTCTTTSSSTTSCCTTCCGGGSCCSTTCCG
T ss_pred EEEcCeecCCCCEEEeChHhhcCCcccCCCccccCCCCCCCCCCccCCCCC
Confidence 999999999999999999999999999987 168999998
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=100.00 E-value=6.6e-44 Score=310.97 Aligned_cols=275 Identities=15% Similarity=0.119 Sum_probs=212.3
Q ss_pred HHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHHHHHHHhhccchhH
Q 048805 23 ERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKVRKICVLELLSLRR 102 (364)
Q Consensus 23 ~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 102 (364)
++||||+++ | ++++++|+.+++++.++ ..|++++...... ..+.+ ++..+|+.|+++|+.+ .+.|++..
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~---~~~~~-l~~~~g~~~~~~R~~~-~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSN---AGGIS-FITMDNPEHKEFRDIS-APYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCG-GGGCCHHHHHHHHHHH-HHHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCC---ccccc-cccCCchHHHHHHHHh-hhhcCHHH
Confidence 579999986 3 99999999999999875 4677765321111 12333 4556799999999998 99999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHHhhccCCchhhhhhc----cccccchhhhhHHH
Q 048805 103 VQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRCVLGRKADEEEKNIG----KSNKFDVLSGLIGR 177 (364)
Q Consensus 103 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~~fG~~~~~~~~~~~----~~~~~~~~~~~~~~ 177 (364)
++.+.+.+.+.++++++.+. ++|+.+.+ ..+++++++.+ ||.+.++.+.... ....+.+......+
T Consensus 71 l~~~~~~i~~~~~~l~~~l~--------~~d~~~~~~~~~~~~vi~~~-~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 141 (343)
T 2rfb_A 71 INDYKDFIEETSNDLIKNID--------NKDIISEYAVRLPVNIISKI-LGIPDSDMPLFKLWSDYIIGNKRDENFNYVN 141 (343)
T ss_dssp HGGGHHHHHHHHHHHHTTCT--------TSCHHHHTTTHHHHHHHHHH-HTCCGGGHHHHHHHHHHHHTSCCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcc--------ccCHHHHHhhhhhHHHHHHH-cCCCHHHHHHHHHHHHHHhhccCcchhhHHH
Confidence 99999999999999998764 68998865 89999999998 9998764432111 00001000001112
Q ss_pred HhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHHHHHhcccchHHHH
Q 048805 178 LNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILDMFVAGTDSTTTTL 257 (364)
Q Consensus 178 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~ag~~tt~~~l 257 (364)
. +....+.+++.+++ .+| ++.|+++..++ ..++++++..++..+++||+|||++++
T Consensus 142 ~-~~~~~~~~~~~~~i-------------------~~d-l~~ll~~~~~~---~~l~~~ei~~~~~~~~~AG~dTt~~~l 197 (343)
T 2rfb_A 142 N-RMVSRLLEIFKSDS-------------------HGI-INVLAGSSLKN---RKLTMDEKIKYIMLLIIGGNETTTNLI 197 (343)
T ss_dssp H-HHHHHHHHHHHSCC-------------------SSH-HHHHHTCBCSS---SBCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHH-------------------hcc-HHHHHhhhcCC---CCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence 2 23333333322222 235 88888764432 369999999999999999999999999
Q ss_pred HHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCC-CcCCcccccccccccceecCCCc
Q 048805 258 EWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPA-PLLLPREIAESLKWRGYDIPSKT 336 (364)
Q Consensus 258 ~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~-~~~~~R~~~~d~~i~g~~IpkGt 336 (364)
+|++++|++||++|+|+++|+ +|||+|+||++|++ + .++|.+.+|++++||.||||+
T Consensus 198 ~~~l~~L~~~P~~~~~l~~E~---------------------~a~i~E~lRl~p~~~~-~~~R~~~~d~~~~g~~Ip~Gt 255 (343)
T 2rfb_A 198 GNMIRVIDENPDIIDDALKNR---------------------SGFVEETLRYYSPIQF-LPHRFAAEDSYINNKKIKKGD 255 (343)
T ss_dssp HHHHHHHHHCGGGHHHHHHCH---------------------HHHHHHHHHHSCSBCC-BCCCEESSCEEETTEEECTTC
T ss_pred HHHHHHHHhCHHHHHHHHcCc---------------------HHHHHHHHhhCccccc-ccceEECCCeEECCEEECCCC
Confidence 999999999999999999994 89999999999999 8 467999999999999999999
Q ss_pred EEEEeeeecccCCCCCCCc---------cccccccC
Q 048805 337 RVIVNAYGQFKGIPKVGTS---------QKISFQTG 363 (364)
Q Consensus 337 ~v~~~~~~~~~d~~~~~~~---------~f~PFg~G 363 (364)
.|+++.+++||||++|+++ .++|||.|
T Consensus 256 ~V~~~~~~~~rd~~~~~dp~~F~PeR~~~~~~FG~G 291 (343)
T 2rfb_A 256 QVIVYLGSANRDETFFDEPDLFKIGRREMHLAFGIG 291 (343)
T ss_dssp EEEECHHHHTTCTTTSSSTTSCCTTCSSCCCTTCCS
T ss_pred EEEEChhhhCCCcccCCCccccCCCCCCCCccCCCC
Confidence 9999999999999999872 58899998
No 75
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=100.00 E-value=9e-42 Score=304.29 Aligned_cols=311 Identities=13% Similarity=0.142 Sum_probs=221.8
Q ss_pred CCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcc---hhcccCCcceeeccCChhHH
Q 048805 11 GTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPA---NILLYECRDIGFANYGEYWR 87 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 87 (364)
..+|+.++.++++ +|||++ ..+..+++|++++.|++++++.. .|+........ ........+.++..+|+.|+
T Consensus 33 ~~dP~~~~~~lR~-~gPV~~--~~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~Dg~~H~ 108 (412)
T 4dnj_A 33 FADPYPEQETLRE-AGPVVY--LDKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKPWRPPSLILEADPPAHT 108 (412)
T ss_dssp HHSCHHHHHHHHH-HCSSEE--ETTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCCSSCCCTTTTCCTTHHH
T ss_pred HhCcHHHHHHHHh-cCCEEE--ECCCCEEEECCHHHHHHHHcCCc-cccCCCccccccccccccccCCCccccCChHHHH
Confidence 4688999988865 699975 45667899999999999997653 44332221111 11111233556777899999
Q ss_pred HHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHH-HHHHHHHHhHHHHHhhccCCchhhhhhcccc
Q 048805 88 KVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLT-EMLLTVSNNIVSRCVLGRKADEEEKNIGKSN 166 (364)
Q Consensus 88 ~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~-~~~~~~~~~~~~~~~fG~~~~~~~~~~~~~~ 166 (364)
++|+.+ .+.|+++.++.+.+.+.+.++++++.+.. .++.+|+. ++...+...+++.++ |.+....+....+..
T Consensus 109 r~R~~~-~~~Fs~~~l~~~~~~i~~~~~~l~~~~~~----~~~~~D~v~~~~~~~~~~~i~~l~-g~~~~~~~~~~~~~~ 182 (412)
T 4dnj_A 109 RTRAVL-SKVLSPATMKRLRDGFAAAADAKIDELLA----RGGNIDAIADLAEAYPLSVFPDAM-GLKQEGRENLLPYAG 182 (412)
T ss_dssp HHHHHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHHH----TTSEEETCCCCCCHHHHHHHHHHH-TCCSTTGGGHHHHHH
T ss_pred HHHhhc-ccccCHHHHHHhhHHHHHHHHHHHHhhhc----cCCCceeHHHHHhhhhHhHHHHHc-CCchhhhhhhhhhhh
Confidence 999998 99999999999999999999999998865 34556653 455566777777654 555443332111100
Q ss_pred ccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHHHH
Q 048805 167 KFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILDMF 246 (364)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~~~ 246 (364)
.+....................+...+.+..+.... ..+.+..++....++ ..++++++..++..++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~~~~---~~l~~~e~~~~~~~l~ 249 (412)
T 4dnj_A 183 LVFNAFGPPNELRQSAIERSAPHQAYVAEQCQRPNL----------APGGFGACIHAFSDT---GEITPEEAPLLVRSLL 249 (412)
T ss_dssp HHHHHTSCSSHHHHHHHHTCHHHHHHHHHHTSGGGS----------CTTSHHHHHHHTTTT---TSSCTTHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHhhcc----------ccccchhhhHhhhhc---cchhHHHHHHHHHHHH
Confidence 000000000111111111122222333333333211 233444555544443 3799999999999999
Q ss_pred HhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccccccc
Q 048805 247 VAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAESLK 326 (364)
Q Consensus 247 ~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d~~ 326 (364)
+||+|||+++++|++++|++||++|+||++| ..|+.++++|++|++|+++.. +|.+.+|++
T Consensus 250 ~AG~eTTa~~l~~~~~~L~~~P~~~~~Lr~~------------------~~~~~~~~eE~lR~~pp~~~~-~R~a~~d~~ 310 (412)
T 4dnj_A 250 SAGLDTTVNGIAAAVYCLARFPDEFARLRAD------------------PSLARNAFEEAVRFESPVQTF-FRTTTRDVE 310 (412)
T ss_dssp HHSSHHHHHHHHHHHHHHHHCHHHHHHHHHC------------------GGGHHHHHHHHHHHHCSBCEE-EEEESSCEE
T ss_pred hccchhHHHHHHHHHHHHhhCHHHHHHHHhC------------------ccccccccceeeeecCCcccc-cccCCCCeE
Confidence 9999999999999999999999999999987 578899999999999999985 599999999
Q ss_pred ccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 327 WRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 327 i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
|+|+.||||+.|+++.+++||||++|++ ..|+|||.|
T Consensus 311 l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~F~PeR~~~~~lpFG~G 357 (412)
T 4dnj_A 311 LAGATIGEGEKVLMFLGSANRDPRRWDDPDRYDITRKTSGHVGFGSG 357 (412)
T ss_dssp ETTEEECTTCEEEEEHHHHTTCTTTSSSTTSCCTTSCCTTCCTTCCS
T ss_pred ECCccCCCCCeEEeehhhccCChhhCCCccccCCCCCCCCCCCcCCC
Confidence 9999999999999999999999999987 678999999
No 76
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=100.00 E-value=3.6e-37 Score=274.11 Aligned_cols=309 Identities=12% Similarity=0.106 Sum_probs=228.8
Q ss_pred CCCCchHHHHHHHHhC-CeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcchhcccCCcceeeccCChhHHHH
Q 048805 11 GTLPHRSLKALSERYG-ALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPANILLYECRDIGFANYGEYWRKV 89 (364)
Q Consensus 11 ~~~~~~~~~~~~~~yG-~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (364)
..+++..+.+++++.+ +++.. ..+...++|+.++.|++++++. ..|+.+....... ........+...+++.|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~-~~~gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~-~~~~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWT-PFTGGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKE-AGEKAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEE-SSTTSEEEECSHHHHHHHHTCT-TTEESSCCSSSTT-SSCSSCTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEec-CCCCCEEEECCHHHHHHHHcCc-hhccCCCcccccc-cccccccCcccCCcHHHHHH
Confidence 3567888888877654 34433 3334578899999999999754 4565443322211 11123344566789999999
Q ss_pred HHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHHHHHHHhHHHHHhhccCCchhhhhhcc----c
Q 048805 90 RKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEMLLTVSNNIVSRCVLGRKADEEEKNIGK----S 165 (364)
Q Consensus 90 R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~~~~~~~~~~~~~fG~~~~~~~~~~~~----~ 165 (364)
|+++ ++.|+++.++.+.+.+.+.++++++.+... +.+|+...+.......+...++|.+..+......+ .
T Consensus 113 Rrll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~~-----g~~D~v~~~a~~l~~~vi~~llg~~~~d~~~~~~~~~~~~ 186 (417)
T 4dxy_A 113 RKAL-DKGLNLAKIRKVEDKVREVASSLIDSFAAR-----GECDFAAEYAELFPVHVFMALADLPLEDIPVLSEYARQMT 186 (417)
T ss_dssp HHHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHTT-----SEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHH
T ss_pred HHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhhc-----CCeeeHHHHHhhhHHHHHHHHcCCCHHHHHHHHhhhhhhc
Confidence 9998 999999999999999999999999998754 67888776655444444455678877654431111 0
Q ss_pred c-ccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCccccccCHHHHHHHHHH
Q 048805 166 N-KFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGMLVAELSQDNLKAIILD 244 (364)
Q Consensus 166 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ 244 (364)
. ..............+...+..++.++++++++.. .+|+++.|+.+..++ ..++++++..++..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~rr~~~------------~ddl~s~L~~~~~~~---~~~~~~e~~~~~~~ 251 (417)
T 4dxy_A 187 RPEGNTPEEMATDLEAGNNGFYAYVDPIIRARVGGD------------GDDLITLMVNSEING---ERIAHDKAQGLISL 251 (417)
T ss_dssp SCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC------------CCSHHHHHHTCEETT---EECCHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------------ccchhhhhccccccC---CccchhHHHHHHHH
Confidence 0 1111112334556677778888888887765432 678999999876665 37999999999999
Q ss_pred HHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCCCCCCcCCccccccc
Q 048805 245 MFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLHPPAPLLLPREIAES 324 (364)
Q Consensus 245 ~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~p~~~~~~~R~~~~d 324 (364)
+++||+|||+++++|++++|++||++++++++|...+ ....|.+|++++.+. .+|.+++|
T Consensus 252 ll~AG~eTTa~~l~~~~~~L~~~P~~~~~l~~e~~~~-------------------~~avee~~~~~~~~~-~~R~a~~d 311 (417)
T 4dxy_A 252 LLLGGLDTVVNFLSFFMIHLARHPELVAELRSDPLKL-------------------MRGAEEMFRRFPVVS-EARMVAKD 311 (417)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHTCHHHHHHHHHCHHHH-------------------HHTHHHHHHHSCCBE-EEEEECSC
T ss_pred HHhhcccchhhHHHHHHHHHHhCchhhhhhccCcccc-------------------ccceeeeeccccccc-cccccccc
Confidence 9999999999999999999999999999999984432 233344444555554 35999999
Q ss_pred ccccceecCCCcEEEEeeeecccCCCCCCC----------ccccccccC
Q 048805 325 LKWRGYDIPSKTRVIVNAYGQFKGIPKVGT----------SQKISFQTG 363 (364)
Q Consensus 325 ~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~----------~~f~PFg~G 363 (364)
++++|+.||||+.|+++.+++||||++|++ ..++|||.|
T Consensus 312 ~~l~G~~Ip~G~~V~~~~~a~~rDp~~f~dP~~FdpeR~~~~~l~FG~G 360 (417)
T 4dxy_A 312 QEYKGVFLKRGDMILLPTALHGLDDAANPEPWKLDFSRRSISHSTFGGG 360 (417)
T ss_dssp EEETTEEECTTCEEEEETHHHHTCTTTSSSTTSCCTTCSCCCCCTTCCG
T ss_pred eEecCccccCCCEEEEeehhhcCChhhCCCccccCCCCCCCCCCCcCCC
Confidence 999999999999999999999999999987 578999998
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.97 E-value=1e-32 Score=240.42 Aligned_cols=264 Identities=16% Similarity=0.119 Sum_probs=172.1
Q ss_pred Cccccchhh----cCCCCchHHHHHHHHhCCeEEEEecCccEEEecCHHHHHHHHhhCCccccCCCCCCcch------hc
Q 048805 1 SHTWQLHQL----LGTLPHRSLKALSERYGALMFVYFGNSPTLVVSSAELAGEMFKTHDIVTSNRPKTTPAN------IL 70 (364)
Q Consensus 1 p~lG~~~~~----~~~~~~~~~~~~~~~yG~v~~~~~~~~~~vvi~~~~~i~~i~~~~~~~~~~~~~~~~~~------~~ 70 (364)
|++|+...+ ...+++.++.+++++ ||+++. .+.+++++++.+++++.+. .|++++...... ..
T Consensus 44 P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~~~~~~~~~~ 116 (381)
T 2yjn_B 44 GSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPEWMRAAGAPP 116 (381)
T ss_dssp HHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCHHHHHHTCCH
T ss_pred cccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCccccccccccccccc
Confidence 456766442 156899999999876 998754 4689999999999999863 566554321000 00
Q ss_pred ccCCcceeeccCChhHHHHHHHHHhhccchhHhhhhHHHHHHHHHHHHHHHHhhhhcCCccccHHHHH-HHHHHhHHHHH
Q 048805 71 LYECRDIGFANYGEYWRKVRKICVLELLSLRRVQSFQHIRDDEVSSLINKIRHLCFNKGRPLNLTEML-LTVSNNIVSRC 149 (364)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~dl~~~~-~~~~~~~~~~~ 149 (364)
...+.+ ++..+++.| .+.|+ . .+.+++.++++++.+. +.+|+...+ ..+++++++.+
T Consensus 117 ~~~~~~-l~~~dg~~H--------~~~Ft-----~-~~~i~~~~~~ll~~~~-------g~~Dl~~~~a~~l~~~vi~~l 174 (381)
T 2yjn_B 117 AEWAQP-FRDVHAASW--------EGEVP-----D-VGELAESFAGLLPGAG-------ARLDLVGDFAWQVPVQGMTAV 174 (381)
T ss_dssp HHHTHH-HHHHHHCCC--------CSCCC-----C-CSCHHHHTSTTSCC-------------CCCCCCTHHHHHHHHTC
T ss_pred chhhhh-hhhCCchhh--------hhccC-----C-hHHHHHHHHHHHHhcc-------CcchHHHHHHHHHHHHHHHHH
Confidence 001222 344457888 35555 3 7788888888887764 368888665 69999999995
Q ss_pred hhccCCchhhhhhccccccchhhhhHHHHhHhHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCcccHHHHHHhhhhcCcc
Q 048805 150 VLGRKADEEEKNIGKSNKFDVLSGLIGRLNTTARALDALLDEVIEEHTNKAASESNDDDNQLDKKDFVDILLQLRKDGML 229 (364)
Q Consensus 150 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~ 229 (364)
||.+.++. . |... +.. .+ .. .. . ...+- ...+...
T Consensus 175 -~G~~~~~~-~------~~~~-------~~~-------~~----~~---~~-~----------~~~~~-~~~~~~~---- 209 (381)
T 2yjn_B 175 -LGAAGVLR-G------AAWD-------ARV-------SL----DA---QL-S----------PQQLA-VTEAAVA---- 209 (381)
T ss_dssp ------CCH-H------HHHH-------HTT-------HH----HH---TT-S----------CCCHH-HHHHHHH----
T ss_pred -cCCCHHHH-H------HHHH-------HHH-------hc----cC---CC-C----------HHHHH-HHHHHHH----
Confidence 99876532 0 1100 000 00 00 00 0 00000 0000000
Q ss_pred ccccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccC
Q 048805 230 VAELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRL 309 (364)
Q Consensus 230 ~~~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl 309 (364)
.+.+ .++..+++||+|||+++++|++++|+.||++++++++|+ .|+++||+|+||+
T Consensus 210 --~l~~----~~~~~ll~aG~eTt~~~l~~~l~~L~~~P~~~~~l~~e~------------------~~l~~~i~E~LR~ 265 (381)
T 2yjn_B 210 --ALPA----DPALRALFAGAEMTANTVVDAVLAVSAEPGLAERIADDP------------------AAAQRTVAEVLRL 265 (381)
T ss_dssp --HCC------CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCC------------------C--HHHHHHHHHH
T ss_pred --HHHH----HHHHHHHHHhhhHHHHHHHHHHHHHHHCHHHHHHHhhCH------------------HHHHHHhCeeeee
Confidence 1111 678889999999999999999999999999999999983 3999999999999
Q ss_pred CCCCCcCCcccccccccccceecCCCcEEEEeeeecccCCCCCCC-----------ccccccccC
Q 048805 310 HPPAPLLLPREIAESLKWRGYDIPSKTRVIVNAYGQFKGIPKVGT-----------SQKISFQTG 363 (364)
Q Consensus 310 ~p~~~~~~~R~~~~d~~i~g~~IpkGt~v~~~~~~~~~d~~~~~~-----------~~f~PFg~G 363 (364)
+|+++. .+|.+.+|++++|+.||||+.|+++.+++||||++|++ ..++|||.|
T Consensus 266 ~pp~~~-~~R~a~~d~~l~G~~Ip~G~~V~~~~~~~~rDp~~~~dp~~F~p~R~~~~~~l~FG~G 329 (381)
T 2yjn_B 266 HPALHL-ERRTATAEVRLGEHVIGEGEEVVVVVAAANRDPEVFAEPDRLDVDRPDADRALSAHRG 329 (381)
T ss_dssp SCSCSE-EEEEESSCEESSSCEECTTCEEEEEHHHHTTCTTTSSSTTSCCSSCSCCCCCCC----
T ss_pred cCCCcc-eeEEECCCeEECCEEECCCCEEEeCHHHHcCCcccCCCccccCCCCCCCCCccCCCCC
Confidence 999997 55999999999999999999999999999999999977 357889987
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=70.63 E-value=14 Score=24.74 Aligned_cols=40 Identities=20% Similarity=0.197 Sum_probs=31.8
Q ss_pred CCchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHh
Q 048805 13 LPHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~ 52 (364)
-..+-+.++..+||+|..+.+. |..+|...+++.+..++.
T Consensus 23 ~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~ 70 (103)
T 1s79_A 23 ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVE 70 (103)
T ss_dssp CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHT
T ss_pred CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHH
Confidence 3456678888899999888764 456788899999999886
No 79
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=65.72 E-value=12 Score=23.53 Aligned_cols=40 Identities=13% Similarity=0.176 Sum_probs=31.5
Q ss_pred CchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 20 t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 20 LKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 346788888999999888765 4567888899998888753
No 80
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=63.85 E-value=13 Score=22.80 Aligned_cols=41 Identities=7% Similarity=0.165 Sum_probs=31.3
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |..+|-..+++.++..+..
T Consensus 11 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~ 60 (75)
T 1iqt_A 11 TPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEK 60 (75)
T ss_dssp CCHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHh
Confidence 3456688888999998887763 3457888899999988864
No 81
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.82 E-value=5.8 Score=26.30 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=31.0
Q ss_pred chHHHHHHHHhC-CeEEEEecCccEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYG-ALMFVYFGNSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG-~v~~~~~~~~~~vvi~~~~~i~~i~~~ 53 (364)
..-+.++..+|| +|..+ .+|.-+|...+.+.++..+..
T Consensus 27 k~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 27 SNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp HHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence 344778889995 99888 568999999999999888754
No 82
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=53.87 E-value=23 Score=21.56 Aligned_cols=40 Identities=10% Similarity=0.121 Sum_probs=30.0
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
-..+.+.++..+||+|..+.+. |..+|-..+++.++.++.
T Consensus 11 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 59 (75)
T 2mss_A 11 TTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCE 59 (75)
T ss_dssp CCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHS
T ss_pred CCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3456678888999998887753 235677889999888875
No 83
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=52.86 E-value=12 Score=16.95 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=10.3
Q ss_pred hHHHHHHHHHHHh
Q 048805 269 TSMKRAREEVRSV 281 (364)
Q Consensus 269 ~~~~~l~~Ei~~~ 281 (364)
.+|.|+|.|+.+-
T Consensus 8 nlqkkirkelkqr 20 (26)
T 1m46_B 8 NLQKKIRKELKQR 20 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5789999998763
No 84
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=51.53 E-value=34 Score=22.81 Aligned_cols=41 Identities=10% Similarity=0.011 Sum_probs=32.7
Q ss_pred CCchHHHHHHHHhCCeEEEEec--CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG--NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~--~~~~vvi~~~~~i~~i~~~ 53 (364)
--.+-+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 27 ~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 27 GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp CCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 3456778888999999888764 5678888999999888864
No 85
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=51.00 E-value=36 Score=23.04 Aligned_cols=40 Identities=10% Similarity=0.048 Sum_probs=31.9
Q ss_pred CchHHHHHHHHhCCeEEEEec--CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG--NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+-+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 29 t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 29 SWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp CTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 356678888999999888874 5678888999998888763
No 86
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=50.21 E-value=19 Score=24.04 Aligned_cols=40 Identities=13% Similarity=0.176 Sum_probs=31.5
Q ss_pred CchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 34 t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 34 LKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp HHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 346688888999999888875 4567888899988888764
No 87
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=49.68 E-value=20 Score=23.38 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=27.9
Q ss_pred HHHHHHHhCCeEEEEec------CccEEEecCHHHHHHHHh
Q 048805 18 LKALSERYGALMFVYFG------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 18 ~~~~~~~yG~v~~~~~~------~~~~vvi~~~~~i~~i~~ 52 (364)
+.++..+||+|..+.+. +.-+|-..+++.++..+.
T Consensus 30 l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 30 LQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp HHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred HHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 44888999999988874 346788889998888875
No 88
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=49.42 E-value=29 Score=22.21 Aligned_cols=37 Identities=14% Similarity=0.269 Sum_probs=29.3
Q ss_pred CchHHHHHHHHhCCeEEEEec----CccEEEecCHHHHHHH
Q 048805 14 PHRSLKALSERYGALMFVYFG----NSPTLVVSSAELAGEM 50 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~----~~~~vvi~~~~~i~~i 50 (364)
--+-+.++..+||+|..+.+. |..+|-..+++.++.+
T Consensus 24 te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 24 TAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp CHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 345678888899999998875 5678888999988754
No 89
>4fu3_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, domain swapping, transc; HET: MSE; 1.90A {Homo sapiens} PDB: 4fld_A*
Probab=49.13 E-value=29 Score=24.52 Aligned_cols=71 Identities=13% Similarity=0.173 Sum_probs=46.6
Q ss_pred ccCHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccC
Q 048805 232 ELSQDNLKAIILDMFVAGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRL 309 (364)
Q Consensus 232 ~~~~~~i~~~~~~~~~ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl 309 (364)
.++++.+...+-.+- ...+....+..|++.+--...++.+-+.+++...- ....+.-+=+++.+++.+-|-
T Consensus 3 sf~~~~l~~~L~~L~-~s~~sI~~~s~w~l~~~~~a~~iv~~i~~~l~~~~------~~~KL~~LYLindIl~ns~~~ 73 (135)
T 4fu3_A 3 SFSESALEKKLSELS-NSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAK------SNRKLTFLYLANDVIQNSKRK 73 (135)
T ss_dssp CCCHHHHHHHHHHCC-SSTTHHHHHHHHHHHTGGGHHHHHHHHHHHHHHSC------TTTHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------cchhHHHHHHHHHHHHHHHhc
Confidence 456666666555553 56677888888999887766777777777765531 123444555667888777654
No 90
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=47.92 E-value=59 Score=21.83 Aligned_cols=38 Identities=16% Similarity=0.237 Sum_probs=30.6
Q ss_pred chHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~ 52 (364)
-+-+.++..+||.|..+.+. |.-+|-..+++.+...+.
T Consensus 30 e~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 30 EGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp HHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 45678899999999888864 456888899998888875
No 91
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=47.86 E-value=21 Score=25.04 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=29.0
Q ss_pred HHHHHHHHhCCeEEEEec------CccEEEecCHHHHHHHHhh
Q 048805 17 SLKALSERYGALMFVYFG------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 17 ~~~~~~~~yG~v~~~~~~------~~~~vvi~~~~~i~~i~~~ 53 (364)
.+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 49 ~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 49 LLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp HHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred HHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 456788999999888763 4568888999988888754
No 92
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=44.79 E-value=32 Score=21.62 Aligned_cols=40 Identities=10% Similarity=0.198 Sum_probs=30.1
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 24 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 72 (87)
T 3s7r_A 24 SKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQ 72 (87)
T ss_dssp CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHS
T ss_pred CHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHh
Confidence 456678888899998887753 2357788899998888854
No 93
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=44.48 E-value=19 Score=23.36 Aligned_cols=37 Identities=16% Similarity=0.363 Sum_probs=29.1
Q ss_pred HHHHHHHHhCCeEEEEec------CccEEEecCHHHHHHHHhh
Q 048805 17 SLKALSERYGALMFVYFG------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 17 ~~~~~~~~yG~v~~~~~~------~~~~vvi~~~~~i~~i~~~ 53 (364)
.+.++..+||+|..+.+. |..+|-..+++.+...+..
T Consensus 28 ~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 28 SLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp HHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 344888999999888765 5578888999998888753
No 94
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=44.41 E-value=52 Score=20.83 Aligned_cols=41 Identities=15% Similarity=0.229 Sum_probs=30.9
Q ss_pred CCchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 20 ~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 20 FTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp CCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 3456688888999998877653 3457888899998888753
No 95
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=44.26 E-value=42 Score=22.68 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=31.1
Q ss_pred CchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~~ 53 (364)
--+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 18 te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 18 DNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 346788888999999877753 2458899999999888754
No 96
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=44.18 E-value=50 Score=21.63 Aligned_cols=40 Identities=15% Similarity=0.064 Sum_probs=29.7
Q ss_pred CchHHHHHHHHhCCeEEEEecC---------ccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFGN---------SPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~~---------~~~vvi~~~~~i~~i~~~ 53 (364)
-.+-+.++..+||+|..+.+.. .-+|-..+++.+...+..
T Consensus 32 te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 32 TQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 3567888889999998877531 246888899988887753
No 97
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.07 E-value=58 Score=21.06 Aligned_cols=42 Identities=10% Similarity=0.146 Sum_probs=31.6
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhhC
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKTH 54 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~~ 54 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+.-+
T Consensus 22 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~ 72 (99)
T 2dgs_A 22 CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMH 72 (99)
T ss_dssp CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhC
Confidence 3445678888899999888763 34578889999998888633
No 98
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=42.09 E-value=54 Score=21.14 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=31.2
Q ss_pred CCchHHHHHHHHhCCeEEEEec------------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG------------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~------------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 17 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 17 TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3456678888999998777654 3457888899999988864
No 99
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=41.66 E-value=61 Score=21.71 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=31.8
Q ss_pred CCchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+-+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 22 ~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 22 TLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp CCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 3456788899999999888863 4467888899988887753
No 100
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=41.54 E-value=65 Score=20.66 Aligned_cols=40 Identities=8% Similarity=0.115 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+-+.++..+||+|..+.+. |..+|-..+++.+...+..
T Consensus 15 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 15 TEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp CHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 356688888999999888863 3457888899998888753
No 101
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=41.02 E-value=59 Score=22.22 Aligned_cols=40 Identities=8% Similarity=0.093 Sum_probs=31.5
Q ss_pred CchHHHHHHHHhCCeEEEEe---------cCccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYF---------GNSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~---------~~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+ -|.-+|-..+++.+..++..
T Consensus 35 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 83 (126)
T 3ex7_B 35 TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 83 (126)
T ss_dssp CHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35667888899999988876 34567889999999888853
No 102
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.93 E-value=66 Score=20.72 Aligned_cols=40 Identities=18% Similarity=0.197 Sum_probs=31.2
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+-+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 21 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 21 SEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp CHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 345688888999999888873 3457888999999888854
No 103
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=40.77 E-value=46 Score=21.86 Aligned_cols=39 Identities=13% Similarity=0.054 Sum_probs=30.3
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 28 t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 28 SEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp CHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 346678888899998887764 345788899999888875
No 104
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=40.57 E-value=64 Score=19.96 Aligned_cols=39 Identities=15% Similarity=0.089 Sum_probs=29.7
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 20 ~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 20 DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp CHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 346678888899999888762 235788889999888874
No 105
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.88 E-value=80 Score=20.87 Aligned_cols=40 Identities=13% Similarity=0.133 Sum_probs=31.3
Q ss_pred CchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+-+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 38 TDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp CHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 456678888999999888874 4567888999988888743
No 106
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=39.84 E-value=55 Score=21.46 Aligned_cols=40 Identities=8% Similarity=0.106 Sum_probs=30.5
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 36 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 36 TEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 345678888999998887763 3457888899988888753
No 107
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.79 E-value=57 Score=21.30 Aligned_cols=40 Identities=10% Similarity=0.086 Sum_probs=30.6
Q ss_pred CchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 28 t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 28 RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp CHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 345677888899999888763 3467888899998888753
No 108
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=39.65 E-value=76 Score=20.58 Aligned_cols=39 Identities=15% Similarity=0.026 Sum_probs=29.0
Q ss_pred CchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~ 52 (364)
--+.+.++..+||+|..+++. |.-+|-..+++.+.....
T Consensus 20 te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 20 DGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp CCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 347788999999999888753 345777788877666654
No 109
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.50 E-value=77 Score=20.60 Aligned_cols=39 Identities=8% Similarity=-0.126 Sum_probs=30.5
Q ss_pred CchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 28 t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 28 TEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp CHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 456688888999999887763 345788889999888875
No 110
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=39.47 E-value=62 Score=21.42 Aligned_cols=39 Identities=8% Similarity=0.038 Sum_probs=30.3
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 39 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 39 QEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp CHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 345678888999999888764 345788889998888875
No 111
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=39.44 E-value=79 Score=20.69 Aligned_cols=40 Identities=18% Similarity=0.218 Sum_probs=31.0
Q ss_pred CchHHHHHHHHhCCeEEEEec----------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG----------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~----------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+-+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 28 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 77 (107)
T 2cph_A 28 NQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA 77 (107)
T ss_dssp CHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHH
Confidence 456688888999999888873 2357888899999888764
No 112
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.42 E-value=50 Score=21.41 Aligned_cols=40 Identities=8% Similarity=0.064 Sum_probs=30.5
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+-+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 30 t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 30 TKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp CHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 345678888899998887764 3457888999999888754
No 113
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.94 E-value=68 Score=19.84 Aligned_cols=41 Identities=7% Similarity=0.112 Sum_probs=31.7
Q ss_pred CCchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |..+|-..+++.+...+..
T Consensus 24 ~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 24 ITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp SCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred CCHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 3456678888999998888764 4567888899999888863
No 114
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=38.57 E-value=62 Score=21.50 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=30.6
Q ss_pred CchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~ 52 (364)
-.+-+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 28 te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 28 VEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp CHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 345688888999999888764 456788889998888875
No 115
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=38.49 E-value=62 Score=21.00 Aligned_cols=41 Identities=15% Similarity=0.150 Sum_probs=31.3
Q ss_pred CCchHHHHHHHHhCCeEEEEec----CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG----NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~----~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |..+|-..+++.+...+..
T Consensus 12 ~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 12 AGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp CSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 3456688888999998777763 4567888999998888753
No 116
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=37.71 E-value=83 Score=20.48 Aligned_cols=40 Identities=13% Similarity=0.047 Sum_probs=31.7
Q ss_pred CchHHHHHHHHhCCeEEEEec-CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 24 t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 24 TEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp CHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 446688888999999888864 4567888899999888763
No 117
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.58 E-value=72 Score=20.27 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=30.2
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 28 t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 28 TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 346688888999998887763 2356788899998888763
No 118
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=37.34 E-value=62 Score=22.05 Aligned_cols=38 Identities=8% Similarity=0.034 Sum_probs=29.7
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHH
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMF 51 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~ 51 (364)
..+.+.++..+||+|..+.+. |.-+|-..+.+.+...+
T Consensus 49 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~ 95 (124)
T 2jwn_A 49 TAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAV 95 (124)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHH
Confidence 356678888999998877762 24578889999998888
No 119
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=37.23 E-value=83 Score=20.32 Aligned_cols=40 Identities=10% Similarity=0.140 Sum_probs=31.4
Q ss_pred CchHHHHHHHHhCCeEEEEec-CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |..+|-..+.+.+...+..
T Consensus 36 t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 36 SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp CHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 345678888999999888863 5567888899998888763
No 120
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=36.86 E-value=79 Score=20.86 Aligned_cols=41 Identities=15% Similarity=0.203 Sum_probs=31.2
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 27 ~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 27 SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 3456678888999999888764 2357888899999888854
No 121
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.31 E-value=62 Score=20.85 Aligned_cols=41 Identities=7% Similarity=-0.024 Sum_probs=30.6
Q ss_pred CCchHHHHHHHHhCCeE-EEEec---------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALM-FVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~-~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|. .+.+. |.-+|-..+++.+...+..
T Consensus 21 ~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 21 MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 34566788889999987 77653 2357888899999888863
No 122
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.27 E-value=78 Score=20.58 Aligned_cols=40 Identities=5% Similarity=-0.154 Sum_probs=30.6
Q ss_pred CchHHHHHHHH-hCCeEEEEec--------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSER-YGALMFVYFG--------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~-yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+ ||+|..+.+. |.-+|-..+++.+...+..
T Consensus 22 t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 22 DDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp CHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 34567788888 9998887762 3457888999999888864
No 123
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=35.99 E-value=62 Score=20.62 Aligned_cols=39 Identities=15% Similarity=0.009 Sum_probs=30.0
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 29 ~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 29 REEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 356678888999998887763 245788889998888875
No 124
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.94 E-value=77 Score=20.06 Aligned_cols=41 Identities=22% Similarity=0.214 Sum_probs=31.4
Q ss_pred CCchHHHHHHHHhCCeEEEEec-CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG-NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~-~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 22 ~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 22 CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 3456788889999998888764 3467778888988888753
No 125
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.35 E-value=83 Score=19.78 Aligned_cols=40 Identities=15% Similarity=0.248 Sum_probs=31.2
Q ss_pred CCchHHHHHHHHhCCeEEEEec-CccEEEecCHHHHHHHHh
Q 048805 13 LPHRSLKALSERYGALMFVYFG-NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~-~~~~vvi~~~~~i~~i~~ 52 (364)
-..+.+.++..+||+|..+.+. +.-+|-..+++.+...+.
T Consensus 20 ~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 20 ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 3446688889999998887764 456788899999888875
No 126
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.09 E-value=93 Score=20.42 Aligned_cols=41 Identities=7% Similarity=-0.086 Sum_probs=31.6
Q ss_pred CCchHHHHHHHHhCC-eEEEEec----------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGA-LMFVYFG----------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~-v~~~~~~----------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+ |..+.+. |..+|-..+++.+...+..
T Consensus 20 ~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 20 KKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp SCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 345677888899998 8888765 3457888899999888854
No 127
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.76 E-value=48 Score=21.66 Aligned_cols=40 Identities=20% Similarity=0.187 Sum_probs=30.7
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 26 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2dnm_A 26 SPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74 (103)
T ss_dssp CHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHH
Confidence 456678888899999888764 3457888899988888763
No 128
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=34.41 E-value=68 Score=20.61 Aligned_cols=40 Identities=10% Similarity=0.178 Sum_probs=31.5
Q ss_pred CchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+ -|..+|-..+++.+...+..
T Consensus 24 t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 24 SKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp CHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 44667888889999888776 35578888999999888864
No 129
>1x5s_A Cold-inducible RNA-binding protein; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=34.34 E-value=83 Score=20.35 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=30.6
Q ss_pred CCchHHHHHHHHhCCeEEEEecC---------ccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFGN---------SPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+.. .-+|-..+++.+...+..
T Consensus 24 ~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 1x5s_A 24 TNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 73 (102)
T ss_dssp CCHHHHHHHHHHHSCCCEEEECCCSSSCSCCSEEEEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 34566788889999988877642 456788899998888743
No 130
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=34.31 E-value=1e+02 Score=20.43 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~~ 53 (364)
--+-+.++..+||.|..+.+. |..+|-..+.+.++..+..
T Consensus 34 te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ 76 (100)
T 3r27_A 34 VEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNY 76 (100)
T ss_dssp CHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 345678888999999888763 5678888899988888753
No 131
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=34.30 E-value=26 Score=19.52 Aligned_cols=25 Identities=8% Similarity=0.060 Sum_probs=14.1
Q ss_pred CccccchhhcCCCCchHHHHHHHHhC
Q 048805 1 SHTWQLHQLLGTLPHRSLKALSERYG 26 (364)
Q Consensus 1 p~lG~~~~~~~~~~~~~~~~~~~~yG 26 (364)
|+|||.+.- ..-......++.+-+|
T Consensus 32 pilgn~fs~-pawisa~~~~~~k~~g 56 (57)
T 1b35_D 32 PVLGNIFST-PAWISAKAADLAKLFG 56 (57)
T ss_dssp CCSCCSSSS-CTTCCCCHHHHHHHTT
T ss_pred ccccccccc-hHHHHHHHHHHHHHhC
Confidence 677777765 4444444555555444
No 132
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.27 E-value=79 Score=20.65 Aligned_cols=42 Identities=10% Similarity=0.199 Sum_probs=31.5
Q ss_pred CCchHHHHHHHHhCCeEEEEecC---------ccEEEecCHHHHHHHHhhC
Q 048805 13 LPHRSLKALSERYGALMFVYFGN---------SPTLVVSSAELAGEMFKTH 54 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvi~~~~~i~~i~~~~ 54 (364)
-..+.+.++..+||+|..+.+.. .-+|-..+++.++.++..+
T Consensus 28 ~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~ 78 (105)
T 2dh8_A 28 TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 78 (105)
T ss_dssp CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHC
T ss_pred CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhC
Confidence 34566788889999988776532 3568889999999888763
No 133
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=34.25 E-value=81 Score=21.29 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=27.8
Q ss_pred CchHHHHHHHHhC-CeEEEEec-----CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYG-ALMFVYFG-----NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG-~v~~~~~~-----~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+-+.++..+|| .|..+.+. |.-+|-..+++.++..+..
T Consensus 41 te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 41 SWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp CHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 3456777788888 67666653 4567777888887777643
No 134
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=34.11 E-value=88 Score=19.67 Aligned_cols=40 Identities=15% Similarity=0.125 Sum_probs=31.3
Q ss_pred CchHHHHHHHHhCCeEEEEec-CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. +.-+|-..+++.++..+..
T Consensus 22 t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 22 TSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp CHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 456678888999999888874 4567888999988888753
No 135
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=33.75 E-value=86 Score=20.53 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=29.0
Q ss_pred chHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~~ 53 (364)
.+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 43 ~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 43 DADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp HHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 45677888899998777653 2457778888888888763
No 136
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=33.73 E-value=83 Score=20.90 Aligned_cols=40 Identities=5% Similarity=0.055 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+.+.++..+||+|..+.+. |.-+|-..+.+.+...+..
T Consensus 38 te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~ 86 (109)
T 2rs2_A 38 TQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 86 (109)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHS
T ss_pred CHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 345677888899999888763 2457888999999988864
No 137
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=33.67 E-value=71 Score=19.61 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=29.9
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 14 t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 14 DDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp CHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 345677888899998877653 2357888999998888753
No 138
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.00 E-value=1e+02 Score=20.05 Aligned_cols=41 Identities=17% Similarity=0.005 Sum_probs=31.9
Q ss_pred CCchHHHHHHHHhCCeEEEEecC---------ccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFGN---------SPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 27 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 27 VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 34566888899999998887632 457888999999998864
No 139
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=32.92 E-value=89 Score=19.36 Aligned_cols=41 Identities=7% Similarity=-0.035 Sum_probs=30.3
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+-+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 18 ~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 18 ITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3455678888899998887763 2356888899998888763
No 140
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=32.85 E-value=90 Score=21.61 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=30.6
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++.++..
T Consensus 59 te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 59 TERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345678888899999888763 2457888899999888863
No 141
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=32.64 E-value=56 Score=21.59 Aligned_cols=38 Identities=21% Similarity=0.238 Sum_probs=29.6
Q ss_pred chHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~ 52 (364)
-+-+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 29 e~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 29 ETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp HHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 45577888899999888764 456888889998888775
No 142
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=32.52 E-value=70 Score=21.62 Aligned_cols=41 Identities=17% Similarity=0.096 Sum_probs=31.6
Q ss_pred CCchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+.+.++..+..
T Consensus 19 ~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 19 TNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp CCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3456688888999998777763 3557888999999888864
No 143
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.50 E-value=1.1e+02 Score=20.19 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=31.5
Q ss_pred chHHHHHHHHhCCeEEEEec----CccEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFG----NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~----~~~~vvi~~~~~i~~i~~~ 53 (364)
.+-+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 31 e~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 31 KDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp HHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 46788899999999888874 3457888899998888865
No 144
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.40 E-value=78 Score=20.07 Aligned_cols=41 Identities=15% Similarity=0.219 Sum_probs=30.6
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 28 ~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 28 LTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp SCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3445678888899999888763 2457888899988888753
No 145
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.25 E-value=48 Score=21.67 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=29.8
Q ss_pred chHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~~ 53 (364)
.+-+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 29 ~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 29 DERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp HHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 45577777889998887764 3457888999999888863
No 146
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=32.07 E-value=74 Score=21.14 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=30.3
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
-..+.+.++..+||+|..+.+. |..+|-..+++.+...+.
T Consensus 38 ~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 38 ITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp CCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 3455677888899998777653 345788899999988875
No 147
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=31.98 E-value=77 Score=21.22 Aligned_cols=40 Identities=23% Similarity=0.231 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+.+.++..+||+|..+.+. |.-+|...+++.++..+..
T Consensus 19 te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 19 RETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp CHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 456688888999999888763 2347889999999888753
No 148
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=31.94 E-value=34 Score=23.34 Aligned_cols=18 Identities=17% Similarity=0.372 Sum_probs=14.6
Q ss_pred hHHHHHHHHhCCeEEEEe
Q 048805 16 RSLKALSERYGALMFVYF 33 (364)
Q Consensus 16 ~~~~~~~~~yG~v~~~~~ 33 (364)
..-+++.+|||.+|++.+
T Consensus 8 ~~~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 8 INTDELKQKYGRVYEIRI 25 (114)
T ss_dssp -CHHHHHHHHSSEEEEEE
T ss_pred ccHHHHHHHhCceEEEEe
Confidence 446789999999999876
No 149
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=31.87 E-value=99 Score=21.49 Aligned_cols=39 Identities=23% Similarity=0.208 Sum_probs=30.2
Q ss_pred chHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
.+-+.++..+||+|..+.+. |..+|-..+++.+...+..
T Consensus 56 ~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 56 EVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp HHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 45688888999998887663 2357888999999888864
No 150
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=31.78 E-value=44 Score=22.16 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=31.3
Q ss_pred chHHHHHHHHhCCeEEEEecCc-cEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFGNS-PTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~~~-~~vvi~~~~~i~~i~~~ 53 (364)
..-+.++...||.+.--|+... .++++.+++.++++++.
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 4567788888998777777644 68999999999999863
No 151
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=31.74 E-value=1e+02 Score=19.70 Aligned_cols=40 Identities=13% Similarity=0.096 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhCCeEEEEecC---ccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFGN---SPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~~---~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..
T Consensus 30 t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~ 72 (97)
T 1why_A 30 SLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAK 72 (97)
T ss_dssp CHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3466788889999998888743 457788899988888753
No 152
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.43 E-value=65 Score=21.53 Aligned_cols=38 Identities=11% Similarity=-0.017 Sum_probs=28.4
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHH
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMF 51 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~ 51 (364)
..+.+.++..+||.|..+.+. |.-+|-..+++.++..+
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~ 84 (114)
T 2cq4_A 38 RPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAI 84 (114)
T ss_dssp CHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHH
T ss_pred CHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHH
Confidence 345677888899999888774 24567778888887777
No 153
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.24 E-value=64 Score=22.23 Aligned_cols=38 Identities=16% Similarity=0.237 Sum_probs=29.6
Q ss_pred chHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~ 52 (364)
-+-+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 45 e~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 45 EGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp HHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 45678888999998887764 456788889888888775
No 154
>2dgo_A Cytotoxic granule-associated RNA binding protein 1; RRM domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2rne_A 2dh7_A
Probab=31.18 E-value=91 Score=20.78 Aligned_cols=40 Identities=10% Similarity=-0.026 Sum_probs=30.7
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 28 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (115)
T 2dgo_A 28 TTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 76 (115)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 346678888999998887763 2457888999999988854
No 155
>2la4_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNA recognition, stress granules, nucleus, RNA-binding, transcription; NMR {Saccharomyces cerevisiae}
Probab=31.08 E-value=83 Score=20.33 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=28.0
Q ss_pred CchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 40 ~~~~l~~~f~~~G~i~~~~~~~~~g~afV~f~~~~~A~~Ai~ 81 (101)
T 2la4_A 40 TEADLIPLFQNFGFILDFKHYPEKGCCFIKYDTHEQAAVCIV 81 (101)
T ss_dssp CHHHHHHHHHTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 345677888889988777763 345677778887777764
No 156
>2cqg_A TDP-43, TAR DNA-binding protein-43; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.04 E-value=93 Score=20.17 Aligned_cols=40 Identities=13% Similarity=0.174 Sum_probs=30.5
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 27 ~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (103)
T 2cqg_A 27 TTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS 75 (103)
T ss_dssp CCHHHHHHHHGGGSCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeEEEEEEecCCCCCccceEEEEECCHHHHHHHHH
Confidence 3456688888999998877652 235788889999999886
No 157
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.80 E-value=57 Score=19.68 Aligned_cols=42 Identities=5% Similarity=0.040 Sum_probs=28.7
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhhC
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKTH 54 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~~ 54 (364)
-..+.+.++..+||+|..+.+. |..+|-..+++.+...+...
T Consensus 12 ~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 12 TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 3455678888899987666552 23466677888888887543
No 158
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=30.78 E-value=1e+02 Score=20.07 Aligned_cols=40 Identities=23% Similarity=0.201 Sum_probs=30.5
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
-..+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 25 ~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 73 (106)
T 2dgp_A 25 LDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQS 73 (106)
T ss_dssp CCHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 3456688889999998888763 245788889998888875
No 159
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=30.71 E-value=1.2e+02 Score=22.26 Aligned_cols=40 Identities=10% Similarity=0.047 Sum_probs=30.6
Q ss_pred CchHHHHHHHHhCCeEEEEec-----CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG-----NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-----~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+-+.++..+||.|-++.+. +.-+|-..+.+.+......
T Consensus 59 ted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 59 TLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp CHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 346788899999999888763 2467888898888877754
No 160
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=30.68 E-value=83 Score=22.89 Aligned_cols=41 Identities=7% Similarity=0.032 Sum_probs=31.1
Q ss_pred CCchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-....+.++..+||+|..+.+. |..+|-..+++.+...+..
T Consensus 84 ~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 84 AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 3456688888999998887763 3567888899988888753
No 161
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=30.30 E-value=97 Score=19.27 Aligned_cols=38 Identities=16% Similarity=0.040 Sum_probs=28.7
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHH
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMF 51 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~ 51 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+
T Consensus 19 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~ 65 (89)
T 3ucg_A 19 TAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSL 65 (89)
T ss_dssp CHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHG
T ss_pred CHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHH
Confidence 345678888899998877653 23578888999888887
No 162
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=30.28 E-value=1e+02 Score=19.13 Aligned_cols=40 Identities=10% Similarity=0.207 Sum_probs=30.4
Q ss_pred CchHHHHHHHHhCCeEEEEe----------cCccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYF----------GNSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~----------~~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+ -|.-+|-..+++.+...+..
T Consensus 17 t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 17 TKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp CHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 44567888899999887765 23457888899999888863
No 163
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.21 E-value=1.2e+02 Score=20.18 Aligned_cols=41 Identities=15% Similarity=0.097 Sum_probs=31.7
Q ss_pred CchHHHHHHHHhCCeEEEEecC---------ccEEEecCHHHHHHHHhhC
Q 048805 14 PHRSLKALSERYGALMFVYFGN---------SPTLVVSSAELAGEMFKTH 54 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~~---------~~~vvi~~~~~i~~i~~~~ 54 (364)
..+.+.++..+||+|..+.+.. .-+|-..+++.++..+..-
T Consensus 30 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 79 (116)
T 2cqd_A 30 TDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 79 (116)
T ss_dssp CHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred CHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhC
Confidence 3566888889999998887643 3578889999999888643
No 164
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.94 E-value=71 Score=20.79 Aligned_cols=40 Identities=13% Similarity=0.063 Sum_probs=30.1
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 21 ~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 21 TEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp CHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 446678888999998776653 3457888899999888853
No 165
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=29.68 E-value=1e+02 Score=21.35 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=30.2
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 76 ~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 76 DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp CHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 346678888899999888762 3357888888988888753
No 166
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=29.51 E-value=1.3e+02 Score=20.03 Aligned_cols=39 Identities=13% Similarity=0.189 Sum_probs=30.5
Q ss_pred CchHHHHHHHHhCCeEEEEec------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. |..+|-..+++.+...+.
T Consensus 21 t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 21 TAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 445678888999999888772 356788889998888875
No 167
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=28.80 E-value=85 Score=20.83 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=30.6
Q ss_pred CchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+.+.++..+||+|..+.+ -|..+|-..+.+.+...+..
T Consensus 44 t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 44 QESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp CHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 34567888889999877776 45677888899988888753
No 168
>2i2y_A Fusion protein consists of immunoglobin G- binding protein G and splicing factor,...; protein-RNA complex RRM alpha-beta sandwich BETA1-alpha1- BETA2-BETA3-alpha2-BETA4; NMR {Streptococcus SP} PDB: 2i38_A
Probab=28.57 E-value=1.6e+02 Score=20.83 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=31.5
Q ss_pred CchHHHHHHHHhCCeEEEEec----CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG----NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~----~~~~vvi~~~~~i~~i~~~ 53 (364)
..+-+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 86 t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 129 (150)
T 2i2y_A 86 NKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRE 129 (150)
T ss_dssp SCHHHHHHHHHHSCEEEEEECSSSCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCCEEEEEEeeCCCcEEEEEECCHHHHHHHHHH
Confidence 345688888999999888873 4567888999998888753
No 169
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.35 E-value=59 Score=20.17 Aligned_cols=38 Identities=16% Similarity=0.122 Sum_probs=27.7
Q ss_pred chHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
.+.+.++..+||+|..+.+. |..+|-..+++.+...+.
T Consensus 19 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 19 DQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp HHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 45566777889998887753 235678888888888775
No 170
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.03 E-value=1.1e+02 Score=19.53 Aligned_cols=39 Identities=13% Similarity=0.171 Sum_probs=30.6
Q ss_pred chHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~~ 53 (364)
.+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 27 ~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 27 PTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp HHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 45678888999999888875 4457888899988888754
No 171
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.71 E-value=67 Score=21.55 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=30.2
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 40 te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 40 TEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp CHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred CHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 346678888899998777653 2456888899999988865
No 172
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.41 E-value=45 Score=21.04 Aligned_cols=37 Identities=16% Similarity=0.350 Sum_probs=28.6
Q ss_pred CchHHHHHHHHhCCeEEEEec----CccEEEecCHHHHHHH
Q 048805 14 PHRSLKALSERYGALMFVYFG----NSPTLVVSSAELAGEM 50 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~----~~~~vvi~~~~~i~~i 50 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++.+
T Consensus 18 te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 18 TEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp CHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred CHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 346677888899999888874 4568888899988764
No 173
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.58 E-value=51 Score=21.48 Aligned_cols=40 Identities=15% Similarity=0.091 Sum_probs=29.4
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 25 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 25 DDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp CHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred CHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 356678888899998777762 2356777888888888753
No 174
>2cpz_A CUG triplet repeat RNA-binding protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2rq4_A 2rqc_A
Probab=26.57 E-value=79 Score=21.12 Aligned_cols=40 Identities=8% Similarity=-0.012 Sum_probs=29.5
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 38 t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 86 (115)
T 2cpz_A 38 GDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQS 86 (115)
T ss_dssp CHHHHHHHHGGGSCCSEEEEEECSSSCSEEEEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCCcCccEEEEECCHHHHHHHHHH
Confidence 346678888899998776653 2357788899998888754
No 175
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.56 E-value=1e+02 Score=20.43 Aligned_cols=39 Identities=13% Similarity=0.022 Sum_probs=29.7
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. +.-+|...+.+.+...+.
T Consensus 28 ~~~~l~~~f~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 74 (114)
T 2do0_A 28 GWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAIS 74 (114)
T ss_dssp CHHHHHHHHTTTSCEEEEEEEECTTCSEEEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCeeeEEEEEECCHHHHHHHHH
Confidence 456678888899998877653 245788889998888875
No 176
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=26.19 E-value=1.7e+02 Score=21.95 Aligned_cols=40 Identities=8% Similarity=0.092 Sum_probs=31.6
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 41 t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 89 (216)
T 2qfj_A 41 GEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89 (216)
T ss_dssp CHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHH
Confidence 356678888999999888772 3467889999999998863
No 177
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=26.15 E-value=88 Score=23.61 Aligned_cols=41 Identities=22% Similarity=0.212 Sum_probs=31.7
Q ss_pred CCchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~~ 53 (364)
-..+-+.++..+||+|..+.+. |..+|-..+++.++..+..
T Consensus 121 ~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~ 169 (193)
T 2voo_A 121 ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 169 (193)
T ss_dssp CCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHC
T ss_pred CCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHh
Confidence 4457788888999998777653 4567888999999988854
No 178
>1x4a_A Splicing factor, arginine/serine-rich 1 (splicing factor 2, alternate splicing factor)...; structure genomics, SURP domain, splicing factor SF2; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.08 E-value=1.4e+02 Score=19.53 Aligned_cols=39 Identities=13% Similarity=0.151 Sum_probs=29.8
Q ss_pred CchHHHHHHHHhCCeEEEEecC------ccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFGN------SPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~~------~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+.. .-+|-..+.+.++..+.
T Consensus 35 t~~~l~~~F~~~G~v~~~~i~~~~~~~g~afV~f~~~~~A~~A~~ 79 (109)
T 1x4a_A 35 RTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVY 79 (109)
T ss_dssp CHHHHHHHHGGGSCEEEEEECCSSSSSCCEEEEESCHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEECCHHHHHHHHH
Confidence 4566888889999997777632 34788889998888874
No 179
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.84 E-value=1.1e+02 Score=20.01 Aligned_cols=41 Identities=12% Similarity=0.150 Sum_probs=29.7
Q ss_pred CchHHHHHHHHhCCeEE-EEe--------cCccEEEecCHHHHHHHHhhC
Q 048805 14 PHRSLKALSERYGALMF-VYF--------GNSPTLVVSSAELAGEMFKTH 54 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~-~~~--------~~~~~vvi~~~~~i~~i~~~~ 54 (364)
..+-+.++..+||.|.. +.+ -|..+|-..+++.++..+..+
T Consensus 28 te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~ 77 (104)
T 1wg5_A 28 SKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKH 77 (104)
T ss_dssp CHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTT
T ss_pred CHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhC
Confidence 34567778888998764 544 245688899999999998653
No 180
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.74 E-value=60 Score=21.69 Aligned_cols=34 Identities=15% Similarity=0.117 Sum_probs=26.4
Q ss_pred HHHHHhCCeEEEEec------------CccEEEecCHHHHHHHHhh
Q 048805 20 ALSERYGALMFVYFG------------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 20 ~~~~~yG~v~~~~~~------------~~~~vvi~~~~~i~~i~~~ 53 (364)
++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 37 ~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 37 EYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp TTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred HHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 677889998887764 3457888899988888864
No 181
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=25.39 E-value=1e+02 Score=26.96 Aligned_cols=40 Identities=13% Similarity=0.109 Sum_probs=31.0
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
....|.++..+||+|..+.+. |..+|...+++.+..++..
T Consensus 115 te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 115 TESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred CHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 346688888999999888762 3468888999998888854
No 182
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=25.29 E-value=1.1e+02 Score=21.76 Aligned_cols=39 Identities=13% Similarity=0.019 Sum_probs=30.8
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~ 52 (364)
.-+.+.++.++||+|..+.+. |.-+|-..+++.+...+.
T Consensus 13 t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 13 TEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp CHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 346678888999999888763 346788899999988884
No 183
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.70 E-value=57 Score=21.71 Aligned_cols=39 Identities=10% Similarity=0.088 Sum_probs=26.6
Q ss_pred CchHHHHHHHHhCCeEEEEec-------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG-------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~-------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 42 te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~ 87 (109)
T 2err_A 42 RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRARE 87 (109)
T ss_dssp CHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHH
Confidence 345577777888887766653 345677777777777765
No 184
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=24.61 E-value=2.1e+02 Score=22.00 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=31.5
Q ss_pred chHHHHHHHHhCCeEEEEec----CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG----NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~----~~~~vvi~~~~~i~~i~~ 52 (364)
.+.+.++..+||+|..+.+. |.-+|-..+++.+...+.
T Consensus 49 e~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~ 90 (229)
T 2adc_A 49 PQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS 90 (229)
T ss_dssp HHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 46678888999999888875 557899999999998885
No 185
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.61 E-value=1.4e+02 Score=18.86 Aligned_cols=41 Identities=15% Similarity=0.231 Sum_probs=31.0
Q ss_pred CCchHHHHHHHHhCCeEEEEecC---------ccEEEecCHHHHHHHHhh
Q 048805 13 LPHRSLKALSERYGALMFVYFGN---------SPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 13 ~~~~~~~~~~~~yG~v~~~~~~~---------~~~vvi~~~~~i~~i~~~ 53 (364)
-..+.+.++..+||+|..+.+.. .-+|-..+++.+...+..
T Consensus 17 ~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (95)
T 2dnz_A 17 ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQ 66 (95)
T ss_dssp CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34566788889999988877632 457888899999888863
No 186
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=24.58 E-value=1.6e+02 Score=21.19 Aligned_cols=40 Identities=15% Similarity=0.255 Sum_probs=30.6
Q ss_pred CchHHHHHHHHhC--CeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYG--ALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG--~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
--+.+.++..+|| .|..+.+. |.-+|-..+++.+...+..
T Consensus 68 te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 68 TDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3466888889999 88887762 2357888999999888865
No 187
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=24.49 E-value=1.5e+02 Score=19.54 Aligned_cols=38 Identities=8% Similarity=0.086 Sum_probs=27.6
Q ss_pred hHHHHHHHHhCCeEEEEec-----------CccEEEecCHHHHHHHHhh
Q 048805 16 RSLKALSERYGALMFVYFG-----------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 16 ~~~~~~~~~yG~v~~~~~~-----------~~~~vvi~~~~~i~~i~~~ 53 (364)
+-+.+...+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~ 78 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQG 78 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHH
Confidence 4566777799999998864 3346778888887777643
No 188
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=24.43 E-value=1.2e+02 Score=22.38 Aligned_cols=41 Identities=15% Similarity=0.149 Sum_probs=31.6
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhhC
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKTH 54 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~~ 54 (364)
.-+-+.++..+||+|..+.+. |.-+|...+++.+...+...
T Consensus 26 te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~ 75 (196)
T 1l3k_A 26 TDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75 (196)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTC
T ss_pred CHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcC
Confidence 456678888999998777653 24578899999999998653
No 189
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.31 E-value=51 Score=22.43 Aligned_cols=38 Identities=18% Similarity=0.209 Sum_probs=29.6
Q ss_pred chHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~ 52 (364)
-+-+.++..+||.|..+.+. |.-+|-..+.+.+...+.
T Consensus 40 e~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 40 DSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp SHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 45677888899998888875 346788889888887775
No 190
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.97 E-value=59 Score=21.02 Aligned_cols=40 Identities=18% Similarity=0.183 Sum_probs=29.4
Q ss_pred CchHHHHHHHHhCCeEEEEec---CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. +.-+|-..+++.+...+..
T Consensus 28 t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 28 TEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp CHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred CHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 345677888899998777764 3456778888888887743
No 191
>2cpd_A Apobec-1 stimulating protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.67 E-value=1.5e+02 Score=18.95 Aligned_cols=40 Identities=20% Similarity=0.030 Sum_probs=31.3
Q ss_pred CCchHHHHHHHHh--CCeEEEEec-CccEEEecCHHHHHHHHh
Q 048805 13 LPHRSLKALSERY--GALMFVYFG-NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 13 ~~~~~~~~~~~~y--G~v~~~~~~-~~~~vvi~~~~~i~~i~~ 52 (364)
-..+.+.++..+| |.|..+.+. +.-+|-..+++.+...+.
T Consensus 27 ~t~~~l~~~F~~~g~g~v~~~~~~~g~afV~f~~~~~A~~A~~ 69 (99)
T 2cpd_A 27 TSEEMIEKEFNNIKPGAVERVKKIRDYAFVHFSNREDAVEAMK 69 (99)
T ss_dssp CCHHHHHHHHHTTSTTCEEEEEECSSEEEEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHhcCCcceEEEEEeCCeEEEEeCCHHHHHHHHH
Confidence 3456688889999 888888763 456788899999888876
No 192
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=23.52 E-value=58 Score=21.18 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=29.3
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~ 52 (364)
-.+.+.++..+||+|..+.+. |.-+|-..+++.++..+.
T Consensus 22 t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 22 DETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred CHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 455678888999998887763 345777888888888875
No 193
>2kt5_A RNA and export factor-binding protein 2; chaperone, mRNA processing, mRNA splicing, transport, nucleus, RNA-binding, spliceosome, transport; NMR {Mus musculus}
Probab=23.43 E-value=1.4e+02 Score=20.17 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=29.6
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~ 52 (364)
..+-+.++..+||+|..+.+. |.-+|-..+.+.++..+.
T Consensus 48 t~~~l~~~F~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 94 (124)
T 2kt5_A 48 SDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMK 94 (124)
T ss_dssp CHHHHHHHHHTTSCCSEEEEECCSSSSCCSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEECCCCCEeeEEEEEECCHHHHHHHHH
Confidence 345678888899998777763 345788889998888875
No 194
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=23.38 E-value=1.4e+02 Score=21.33 Aligned_cols=40 Identities=13% Similarity=0.085 Sum_probs=31.2
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. +.-+|...+++.+..++..
T Consensus 52 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 100 (156)
T 1h2v_Z 52 TEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 (156)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 356688888999999888762 2347888999999998864
No 195
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=23.09 E-value=78 Score=21.26 Aligned_cols=39 Identities=10% Similarity=0.018 Sum_probs=28.5
Q ss_pred chHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
.+.+.++..+||+|..+.+. |.-+|-..+++.++..+..
T Consensus 54 ~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 54 DTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp HHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 45677778889998887763 2346777888888888753
No 196
>1b7f_A Protein (SXL-lethal protein), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3; splicing regulation, RNP domain, RNA complex; 2.60A {Drosophila melanogaster} SCOP: d.58.7.1 d.58.7.1 PDB: 3sxl_A* 1sxl_A 2sxl_A
Probab=23.00 E-value=1.6e+02 Score=20.96 Aligned_cols=39 Identities=18% Similarity=0.073 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
..+.+.++.++||+|..+.+. |.-+|-..+++.++..+.
T Consensus 16 ~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~a~~ 63 (168)
T 1b7f_A 16 TDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIK 63 (168)
T ss_dssp CHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeeEEEEEEeCCCCccceEEEEEECCHHHHHHHHH
Confidence 356688889999999888753 346788899999998885
No 197
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=22.70 E-value=1.1e+02 Score=20.12 Aligned_cols=40 Identities=10% Similarity=0.074 Sum_probs=29.7
Q ss_pred CchHHHHHHHHhCCeEEEEe-cCccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYF-GNSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~-~~~~~vvi~~~~~i~~i~~~ 53 (364)
-.+.+.++..+||+|..+.+ -+.-+|-..+++.++..+..
T Consensus 41 t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 81 (110)
T 1wf1_A 41 KKSDVETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLG 81 (110)
T ss_dssp CHHHHHHHHGGGSCCSEEEEETTEEEEECSSSHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCeEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 35567888889999877776 34457778888888888743
No 198
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=22.55 E-value=37 Score=22.59 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=31.1
Q ss_pred chHHHHHHHHhCCeEEEEecCc-cEEEecCHHHHHHHHhh
Q 048805 15 HRSLKALSERYGALMFVYFGNS-PTLVVSSAELAGEMFKT 53 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~~~-~~vvi~~~~~i~~i~~~ 53 (364)
..-+..+...||.+.--|+... .++++.+|+.+++++..
T Consensus 19 t~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 19 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp HHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 4556778888998777777654 68999999999999974
No 199
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.78 E-value=91 Score=19.82 Aligned_cols=40 Identities=8% Similarity=0.091 Sum_probs=29.7
Q ss_pred CchHHHHHHHHhCCeEEE-Eec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFV-YFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~-~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+ .+. |.-+|-..+++.++..+..
T Consensus 18 t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 67 (96)
T 1x5t_A 18 DEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 67 (96)
T ss_dssp CHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 456688888999987655 442 3457888999999998863
No 200
>1fxl_A Paraneoplastic encephalomyelitis antigen HUD; protein-RNA complex, AU-rich element, transcription/RNA complex; 1.80A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1g2e_A 1fnx_H 1d8z_A 1d9a_A 3hi9_A
Probab=21.55 E-value=1.6e+02 Score=20.83 Aligned_cols=40 Identities=10% Similarity=0.037 Sum_probs=31.0
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
.-+.+.++..+||+|..+.+. |..+|-..+++.++..+..
T Consensus 15 ~~~~l~~~f~~~G~i~~v~~~~~~~~~~~~g~afV~f~~~~~A~~a~~~ 63 (167)
T 1fxl_A 15 TQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 63 (167)
T ss_dssp CHHHHHHHHHTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEeCCCCCcceeEEEEEECCHHHHHHHHHH
Confidence 456678888999998877753 3457888999999998863
No 201
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=21.50 E-value=1.7e+02 Score=21.61 Aligned_cols=40 Identities=13% Similarity=0.145 Sum_probs=30.9
Q ss_pred CchHHHHHHHHhCCeEEEEec--------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG--------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~--------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+-+.++..+||+|..+.+. |.-+|...+++.+...+..
T Consensus 101 te~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~~~~A~~Ai~~ 148 (177)
T 2f3j_A 101 SDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQ 148 (177)
T ss_dssp CHHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCCHHHHHHHHHH
Confidence 355678888999998887763 3457888899998888763
No 202
>4flb_A Regulation of nuclear PRE-mRNA domain-containing; structural genomics consortium, SGC, protein binding; 1.80A {Homo sapiens}
Probab=21.38 E-value=1.2e+02 Score=21.05 Aligned_cols=57 Identities=11% Similarity=0.094 Sum_probs=37.7
Q ss_pred hcccchHHHHHHHHHHHhhCchHHHHHHHHHHHhhcCCCCCChhhcccchhHHHHHhhhccCC
Q 048805 248 AGTDSTTTTLEWAMAELVKNPTSMKRAREEVRSVAKGKLNINMKEIEKMEYLKCVVKETLRLH 310 (364)
Q Consensus 248 ag~~tt~~~l~~~l~~L~~~p~~~~~l~~Ei~~~~~~~~~~~~~~l~~l~~L~a~i~E~lRl~ 310 (364)
...+....+..|++.+--..+++.+-+.+++... .....+.-+=+++.+++.+-|-+
T Consensus 19 ~s~~sI~~~s~w~l~h~~~a~~Iv~~i~~~l~~~------~~~~KL~~LYL~ndIl~ns~~~~ 75 (132)
T 4flb_A 19 NTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRS------AYPHRLNLFYLANDVIQNCKRKN 75 (132)
T ss_dssp SSHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHS------CHHHHHHHHHHHHHHHHHTTTTT
T ss_pred ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC------ChhhHHHHHHHHHHHHHHhcccC
Confidence 4445666778899988777777877777777653 12234445556688888776644
No 203
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=21.33 E-value=1.7e+02 Score=18.81 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=29.8
Q ss_pred chHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~ 52 (364)
.+.+.++..+||+|..+.+. |..+|-..+++.++..+.
T Consensus 26 ~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 26 KKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp HHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 35677888899999888764 345788889999888875
No 204
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=21.32 E-value=1.6e+02 Score=22.39 Aligned_cols=38 Identities=11% Similarity=0.068 Sum_probs=30.7
Q ss_pred chHHHHHHHHhCCeEEEEec----CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG----NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~----~~~~vvi~~~~~i~~i~~ 52 (364)
.+.+.++..+||+|..+.+. |.-+|...+++.+...+.
T Consensus 19 ~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 19 CDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp HHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 34678888999999999874 457899999999888774
No 205
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=21.05 E-value=1.3e+02 Score=21.36 Aligned_cols=40 Identities=8% Similarity=0.156 Sum_probs=30.2
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
..+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 100 t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 148 (167)
T 2cjk_A 100 RPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 148 (167)
T ss_dssp CHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHC
T ss_pred CHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhC
Confidence 346678888899998777753 2356888899999888863
No 206
>2j76_E EIF-4B, EIF4B, eukaryotic translation initiation factor 4B; protein biosynthesis, RNA recognition motif, RNA binding domain, RRM, RBD, RNP; NMR {Homo sapiens}
Probab=21.01 E-value=1.5e+02 Score=19.11 Aligned_cols=37 Identities=8% Similarity=-0.031 Sum_probs=27.6
Q ss_pred chHHHHHHHHhCCeEEEEec----------CccEEEecCHHHHHHHHh
Q 048805 15 HRSLKALSERYGALMFVYFG----------NSPTLVVSSAELAGEMFK 52 (364)
Q Consensus 15 ~~~~~~~~~~yG~v~~~~~~----------~~~~vvi~~~~~i~~i~~ 52 (364)
.+-+.++..+|| |..+.+. |.-+|-..+.+.++..+.
T Consensus 33 ~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~Ai~ 79 (100)
T 2j76_E 33 EESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS 79 (100)
T ss_dssp SSHHHHHSCSSC-EEEEECSCCTTTTCCCCSCEEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHhcC-CeEEEEEecCCcCCccCeEEEEEECCHHHHHHHHh
Confidence 455677778899 8888763 245688889999888883
No 207
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=20.60 E-value=1.5e+02 Score=22.49 Aligned_cols=40 Identities=10% Similarity=0.013 Sum_probs=30.6
Q ss_pred CchHHHHHHHHhCCeEEEEec---------CccEEEecCHHHHHHHHhh
Q 048805 14 PHRSLKALSERYGALMFVYFG---------NSPTLVVSSAELAGEMFKT 53 (364)
Q Consensus 14 ~~~~~~~~~~~yG~v~~~~~~---------~~~~vvi~~~~~i~~i~~~ 53 (364)
--+.+.++..+||+|..+.+. |.-+|-..+++.+...+..
T Consensus 28 te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 28 TEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp CHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 356678888999999887753 2457888999998888754
Done!