Your job contains 1 sequence.
>048817
MKIEFNMGGNLWNDEDKAMGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQNKLSDLV
DRPNASNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQ
RMRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKH
VWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATF
SSNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEGVPKIFGQELNNSGHVHTPFS
REKLAVRKMEERPSWEAYTNGNRTAFPGIRNGVHGFSWGNVQGVKQGIATEIFGSQTNNL
QELVNGVREDFRINHYQSQKPMQMQIDFSGATSRPNVIARPLNADSEHSDVEASCRDERT
GTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLG
DAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVR
VSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAAFS
CESSSIQPLSSVG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048817
(613 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035237 - symbol:AT1G01260 "AT1G01260" species... 1452 1.0e-148 1
TAIR|locus:2039094 - symbol:AIB "AT2G46510" species:3702 ... 776 5.0e-138 3
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 355 3.4e-58 2
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 363 5.4e-58 3
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 386 7.2e-57 3
TAIR|locus:2035609 - symbol:MYC2 "AT1G32640" species:3702... 584 9.6e-57 1
TAIR|locus:2172932 - symbol:NIG1 "AT5G46830" species:3702... 291 5.0e-41 2
TAIR|locus:2130619 - symbol:AT4G16430 "AT4G16430" species... 411 2.5e-38 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 257 1.5e-32 2
TAIR|locus:504954829 - symbol:GL3 "AT5G41315" species:370... 259 4.2e-32 3
TAIR|locus:2118524 - symbol:TT8 "AT4G09820" species:3702 ... 247 1.7e-31 2
UNIPROTKB|Q948Y2 - symbol:Plw-OSB2 "R-type basic helix-lo... 241 3.8e-28 2
TAIR|locus:2134583 - symbol:AT4G00870 "AT4G00870" species... 247 5.8e-26 3
UNIPROTKB|Q7XPS7 - symbol:OSJNBa0065O17.4 "OSJNBa0065O17.... 187 1.2e-22 2
TAIR|locus:2127023 - symbol:ATMYC1 species:3702 "Arabidop... 188 8.5e-18 3
UNIPROTKB|Q6ZBI4 - symbol:P0623F08.11 "Phaseolin G-box bi... 202 2.8e-15 1
UNIPROTKB|Q84R79 - symbol:OSJNBb0113I20.1 "Putative ammon... 207 1.6e-14 1
UNIPROTKB|Q69IU0 - symbol:P0498F03.15 "Putative MYC-relat... 193 5.8e-13 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 196 9.0e-13 1
UNIPROTKB|Q84LF9 - symbol:RERJ1 "Transcription Factor" sp... 158 1.0e-11 2
TAIR|locus:2039445 - symbol:AMS "AT2G16910" species:3702 ... 170 3.1e-11 3
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 182 4.5e-11 1
TAIR|locus:2062225 - symbol:AT2G22750 "AT2G22750" species... 176 1.2e-10 1
UNIPROTKB|Q6YUS3 - symbol:OSJNBb0088N06.15 "BHLH protein-... 165 1.5e-10 3
TAIR|locus:2137574 - symbol:AT4G37850 "AT4G37850" species... 176 1.6e-10 1
TAIR|locus:2142419 - symbol:AT5G10570 "AT5G10570" species... 175 1.8e-10 1
TAIR|locus:2155725 - symbol:bHLH093 "AT5G65640" species:3... 176 2.0e-10 1
TAIR|locus:2123954 - symbol:AT4G29930 "AT4G29930" species... 169 3.3e-10 1
UNIPROTKB|Q8H8E4 - symbol:OJ1006F06.1 "Putative bHLH tran... 172 9.4e-10 1
UNIPROTKB|Q2R3F6 - symbol:Os11g0523700 "Helix-loop-helix ... 174 1.7e-09 2
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 163 3.3e-09 1
UNIPROTKB|Q657A4 - symbol:P0022F12.30 "Regulatory protein... 158 3.9e-09 2
UNIPROTKB|Q53L62 - symbol:LOC_Os11g15210 "Helix-loop-heli... 154 5.0e-09 2
TAIR|locus:2090847 - symbol:ICE1 "AT3G26744" species:3702... 166 5.7e-09 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 164 6.9e-09 2
TAIR|locus:2046198 - symbol:FRU "AT2G28160" species:3702 ... 159 1.2e-08 1
UNIPROTKB|Q336V8 - symbol:Os10g0544200 "Os10g0544200 prot... 160 1.5e-08 1
TAIR|locus:2079512 - symbol:AT3G61950 "AT3G61950" species... 158 2.2e-08 1
UNIPROTKB|Q7XKP5 - symbol:OSJNBb0013O03.11 "OSJNBb0013O03... 153 4.5e-08 1
UNIPROTKB|Q8LSP3 - symbol:OJ1203D03.3 "Helix-loop-helix D... 157 4.7e-08 1
UNIPROTKB|Q653A4 - symbol:OSJNBa0043B22.14 "Basic helix-l... 112 5.2e-08 2
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 151 1.0e-07 1
TAIR|locus:2020003 - symbol:AT1G10610 "AT1G10610" species... 148 4.7e-07 3
TAIR|locus:2141206 - symbol:DYT1 "AT4G21330" species:3702... 137 5.8e-07 1
TAIR|locus:2154197 - symbol:SPCH "AT5G53210" species:3702... 123 1.4e-06 2
UNIPROTKB|Q5SMX4 - symbol:P0498B01.36 "cDNA clone:J033115... 144 1.5e-06 2
UNIPROTKB|Q6ZGS3 - symbol:OJ1148_D05.9 "Putative basic-he... 117 2.2e-06 2
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 142 2.3e-06 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 140 2.9e-06 1
UNIPROTKB|Q69MD0 - symbol:OSJNBb0019B14.23 "BHLH-like pro... 132 3.4e-06 1
UNIPROTKB|Q58GE3 - symbol:UDT1 "Undeveloped tapetum 1" sp... 133 4.0e-06 1
UNIPROTKB|Q7F7Z2 - symbol:Os01g0159800 "ESTs C26093(C1162... 134 4.4e-06 1
TAIR|locus:2178560 - symbol:bHLH071 "AT5G46690" species:3... 136 5.0e-06 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 131 5.1e-06 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 135 5.2e-06 1
UNIPROTKB|Q7X8R0 - symbol:OSJNBa0083N12.3 "OSJNBa0083N12.... 135 5.3e-06 2
UNIPROTKB|Q5KQG3 - symbol:OSJNBb0086G17.12 "Putative unch... 116 6.7e-06 2
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 141 9.2e-06 2
UNIPROTKB|Q6ZJC8 - symbol:OJ1666_A04.16 "Os08g0477900 pro... 129 9.6e-06 1
TAIR|locus:2040287 - symbol:BHLH100 "basic helix-loop-hel... 130 1.0e-05 1
TAIR|locus:2065086 - symbol:AT2G40200 "AT2G40200" species... 130 1.2e-05 1
UNIPROTKB|Q6ESL3 - symbol:OJ1294_G06.8 "DNA binding prote... 132 1.6e-05 2
TAIR|locus:2012393 - symbol:AT1G68810 "AT1G68810" species... 132 1.8e-05 1
TAIR|locus:504956068 - symbol:AT2G31215 "AT2G31215" speci... 110 2.2e-05 1
UNIPROTKB|Q8H8H9 - symbol:OJ1126B12.2 "Helix-loop-helix D... 129 2.3e-05 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 131 2.4e-05 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 133 2.6e-05 1
UNIPROTKB|Q6ETQ5 - symbol:P0613F08.25 "Basic helix-loop-h... 116 2.6e-05 2
TAIR|locus:2135169 - symbol:bHLH11 "AT4G36060" species:37... 128 2.9e-05 1
TAIR|locus:2042551 - symbol:CPUORF7 "conserved peptide up... 103 3.3e-05 3
TAIR|locus:2044387 - symbol:AT2G46810 "AT2G46810" species... 129 3.9e-05 1
UNIPROTKB|Q941Z7 - symbol:P0431G06.13-1 "BHLH transcripti... 125 4.2e-05 1
TAIR|locus:2080600 - symbol:bHLH38 "basic helix-loop-heli... 120 4.5e-05 2
UNIPROTKB|Q6K4B1 - symbol:OJ1595_D08.4 "Os09g0468700 prot... 108 4.5e-05 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 119 4.5e-05 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 130 4.5e-05 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 120 5.2e-05 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 129 5.3e-05 2
TAIR|locus:2116977 - symbol:AT4G01460 "AT4G01460" species... 114 5.5e-05 2
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 121 6.5e-05 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 125 6.8e-05 1
TAIR|locus:2082400 - symbol:MUTE "AT3G06120" species:3702... 114 6.9e-05 2
TAIR|locus:2042556 - symbol:AT2G31210 "AT2G31210" species... 132 9.2e-05 2
UNIPROTKB|Q75IR0 - symbol:OSJNBb0099P06.13 "Putative unch... 123 9.2e-05 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 132 9.3e-05 2
TAIR|locus:2085964 - symbol:BHLH32 "AT3G25710" species:37... 125 9.4e-05 1
UNIPROTKB|Q6ZA99 - symbol:P0431A03.9 "Os08g0432800 protei... 125 9.4e-05 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 124 0.00010 1
TAIR|locus:2080615 - symbol:bHLH39 "basic helix-loop-heli... 122 0.00010 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 132 0.00012 2
TAIR|locus:2152262 - symbol:BIM3 "AT5G38860" species:3702... 122 0.00015 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 126 0.00016 2
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 123 0.00016 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 127 0.00018 2
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 123 0.00025 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 113 0.00036 2
TAIR|locus:2093746 - symbol:FMA "AT3G24140" species:3702 ... 121 0.00036 1
ASPGD|ASPL0000066711 - symbol:anbH1 species:162425 "Emeri... 118 0.00040 1
UNIPROTKB|Q9FTQ1 - symbol:P0665D10.21 "DNA binding protei... 117 0.00042 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 124 0.00049 2
WARNING: Descriptions of 3 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035237 [details] [associations]
symbol:AT1G01260 "AT1G01260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009694 "jasmonic acid metabolic process" evidence=RCA]
[GO:0009753 "response to jasmonic acid stimulus" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG313259 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF251698 EMBL:AC023628 EMBL:AF488559
EMBL:AY079012 EMBL:AY120752 EMBL:BT004517 IPI:IPI00539052
PIR:H86142 RefSeq:NP_001077440.1 RefSeq:NP_001184883.1
RefSeq:NP_171634.1 UniGene:At.28312 ProteinModelPortal:Q9LNJ5
SMR:Q9LNJ5 IntAct:Q9LNJ5 EnsemblPlants:AT1G01260.1
EnsemblPlants:AT1G01260.2 EnsemblPlants:AT1G01260.3 GeneID:839545
KEGG:ath:AT1G01260 TAIR:At1g01260 InParanoid:Q9LNJ5 OMA:FPANYCY
PhylomeDB:Q9LNJ5 ProtClustDB:CLSN2682849 Genevestigator:Q9LNJ5
Uniprot:Q9LNJ5
Length = 590
Score = 1452 (516.2 bits), Expect = 1.0e-148, P = 1.0e-148
Identities = 340/627 (54%), Positives = 421/627 (67%)
Query: 6 NMGGNLWNDEDKAMGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQNKLSDLVDRPNA 65
N+G +WN++DKA+ A++LG RA DYLL++S+SN NLLM +GSDE+LQNKLSDLV+RPNA
Sbjct: 2 NIGRLVWNEDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPNA 61
Query: 66 SNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQRMRKR 125
SNFSWNYAIFWQISRSK+GD VL WGDG CREPKEGE+SE RI ++ E+ET Q MRKR
Sbjct: 62 SNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRKR 121
Query: 126 VLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHVWLLD 185
VLQKLH LFGGS+E+N ALGLDRVTDTEMF L+SMYFSFPRGEGGPGKCFAS K VWL D
Sbjct: 122 VLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVWLSD 181
Query: 186 ALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATFSSNSS 245
+ SDYCVRSFLAKSA IQT+VL+ TD GVVELGS +PES + + SIR+ F+S S
Sbjct: 182 VVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIRSLFTS--S 239
Query: 246 LATVKPMAVALPVT-SEKKDENG--LFP----NLGILDRVEGVPKIFGQELNNSGHVHTP 298
L V+ AVALPVT +EK D+N +F N G L + + Q+ H
Sbjct: 240 LPPVR--AVALPVTVAEKIDDNRTKIFGKDLHNSGFLQHHQHHQQ--QQQQPPQQQQHRQ 295
Query: 299 FSREKLAVRKMEER-PS-WEAY-TNGNRTAF--PGIRNG-VHGFSWGNVQGVKQGIATEI 352
F REKL VRKM++R P +AY NGNR F PG N + +W + + I
Sbjct: 296 F-REKLTVRKMDDRAPKRLDAYPNNGNRFMFSNPGTNNNTLLSPTWVQPENYTRPI---- 350
Query: 353 FGSQTNNLQELVNGVREDFRINHYQSQK---PMQMQIDFSGATSRPNVIARPLNADSEHS 409
N++E+ + F SQ+ P QMQIDFS A+SR A N+D E
Sbjct: 351 ------NVKEVPSTDEFKFLPLQQSSQRLLPPAQMQIDFSAASSR----ASENNSDGEGG 400
Query: 410 D--VEASCRDERTGTVEEXXXXXXXXXXXXXXEEPLNHVEAERQRREKLNQRFYALRAVV 467
+A DE +G E LNHVEAERQRREKLNQRFYALR+VV
Sbjct: 401 GEWADAVGADE-SGNNRPRKRGRRPANGRA---EALNHVEAERQRREKLNQRFYALRSVV 456
Query: 468 PNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPD 527
PNISKMDKASLLGDA++YINEL AKLKVMEAERE L + SNP + + D
Sbjct: 457 PNISKMDKASLLGDAVSYINELHAKLKVMEAERERLG--------YSSNPPISLDS---D 505
Query: 528 VDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGS 587
+++Q + ++V VR++CPL+SHPASR+ AF+++++ V+ S L D V HTFV+KS
Sbjct: 506 INVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDTVLHTFVVKS--- 562
Query: 588 EQLTKEKLIAAFSCE-SSSIQPLSSVG 613
E+LTKEKLI+A S E ++S+Q +S G
Sbjct: 563 EELTKEKLISALSREQTNSVQSRTSSG 589
>TAIR|locus:2039094 [details] [associations]
symbol:AIB "AT2G46510" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009620 "response
to fungus" evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0009737
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009611
GO:GO:0009738 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC006526 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC006418
EMBL:AY094399 IPI:IPI00535471 PIR:G84903 RefSeq:NP_566078.1
UniGene:At.19872 ProteinModelPortal:Q9ZPY8 SMR:Q9ZPY8 PaxDb:Q9ZPY8
PRIDE:Q9ZPY8 EnsemblPlants:AT2G46510.1 GeneID:819262
KEGG:ath:AT2G46510 TAIR:At2g46510 eggNOG:NOG313259
HOGENOM:HOG000238207 InParanoid:Q9ZPY8 OMA:KIMEDER PhylomeDB:Q9ZPY8
ProtClustDB:CLSN2917347 Genevestigator:Q9ZPY8 InterPro:IPR025610
Pfam:PF14215 Uniprot:Q9ZPY8
Length = 566
Score = 776 (278.2 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 150/238 (63%), Positives = 184/238 (77%)
Query: 6 NMGGNLWNDEDKAMGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQNKLSDLVDRPNA 65
NM W+DEDK++ +AVLG A D+L +S SN+NL + +G+D+ L KLS LVD PN+
Sbjct: 2 NMSDLGWDDEDKSVVSAVLGHLASDFLRANSNSNQNLFLVMGTDDTLNKKLSSLVDWPNS 61
Query: 66 SNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATR---IPNIRLEDETQQRM 122
NFSWNYAIFWQ + S+SG VLGWGDG CREP E EES+ R N+ E+ET Q M
Sbjct: 62 ENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQDM 121
Query: 123 RKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHVW 182
RKRVLQKLH LFGGSDEDNYAL L++VT TE+FFLASMYF F GEGGPG+C++SGKHVW
Sbjct: 122 RKRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEGGPGRCYSSGKHVW 181
Query: 183 LLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATF 240
L DA+ SDYC RSF+AKSA I+TIV++ TDAGV+ELGSV S+PE++ LV S++A F
Sbjct: 182 LSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPENIGLVKSVQALF 239
Score = 538 (194.4 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 129/244 (52%), Positives = 160/244 (65%)
Query: 373 INHYQSQKPMQMQIDFSG----ATSRPNVIARPLNADS--EHSDVEASCRDERTGTVEEX 426
+N + QI+F+G A+S P+ + ++S E V V+E
Sbjct: 318 VNMVVDNNNYKTQIEFAGSSVAASSNPSTNTQQEKSESCTEKRPVSLLAGAGIVSVVDEK 377
Query: 427 XXXXXXXXXXXXXEEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYI 486
EEPLNHVEAERQRREKLNQRFYALR+VVPNISKMDKASLLGDAI+YI
Sbjct: 378 RPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAISYI 437
Query: 487 NELQAKLKVMEAERENLSGNSRDLSAFESNP-NVESQNRAPDVDIQAAHDEVVVRVSCPL 545
ELQ K+K+ME ER G + LS ESN VE +P+VDIQA ++EVVVRV PL
Sbjct: 438 KELQEKVKIMEDERV---GTDKSLS--ESNTITVEE---SPEVDIQAMNEEVVVRVISPL 489
Query: 546 DSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQ-GSEQLTKEKLIAAFSCESS 604
DSHPASR+IQA +++ ++++E+KLS D +FHTFVIKS GS+ LTKEKLIAAF E+S
Sbjct: 490 DSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIKSNNGSDPLTKEKLIAAFYPETS 549
Query: 605 SIQP 608
S QP
Sbjct: 550 STQP 553
Score = 73 (30.8 bits), Expect = 5.0e-138, Sum P(3) = 5.0e-138
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 280 GVPKIFGQELNNSGHVHTPFSREKLAVRK-MEER--P-SWEAYTNGNRTAF 326
G+ K+FGQ+L+ + H + P +KL VR+ ++ER P SWE Y N F
Sbjct: 258 GIHKLFGQDLSGA-HAY-P---KKLEVRRNLDERFTPQSWEGYNNNKGPTF 303
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 355 (130.0 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 87/214 (40%), Positives = 125/214 (58%)
Query: 402 LNADSEHSDVEASCRDERTGT---VE-EXXXXXXXXXXXXXXEEPLNHVEAERQRREKLN 457
L DS HSD+EAS E VE E EEPLNHVEAERQRREKLN
Sbjct: 370 LPCDSNHSDLEASVAKEAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLN 429
Query: 458 QRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL----------SGNS 507
QRFY+LRAVVPN+SKMDKASLLGDAI+YI+EL++KL+ E+++E L +GN+
Sbjct: 430 QRFYSLRAVVPNVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNA 489
Query: 508 RDLSAFESNPNVESQNRAP-DVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVE 566
+ N ES +VD++ + ++R+ C +HP ++ ++A K+ + V
Sbjct: 490 KSSVKDRKCLNQESSVLIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNH 549
Query: 567 SKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAAFS 600
+ LS ND++ +K G++ T+++L A +
Sbjct: 550 ASLSVVNDLMIQQATVK-MGNQFFTQDQLKVALT 582
Score = 309 (113.8 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 103/338 (30%), Positives = 161/338 (47%)
Query: 10 NLWN-DEDKAMGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQNKLSDLVDRPNASNF 68
NLW+ D+D ++ A +G + L + L ++++LQ +L L++ +N
Sbjct: 22 NLWSTDDDASVMEAFIGGGSDHSSLFPPLPPPPLPQV--NEDNLQQRLQALIE---GANE 76
Query: 69 SWNYAIFWQISRSKSGD-------WVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQR 121
+W YA+FWQ S +G+ +LGWGDG + GEE E +R +Q
Sbjct: 77 NWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYK----GEE-EKSRKKKSNPASAAEQE 131
Query: 122 MRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHV 181
RKRV+++L++L G G + VTDTE FFL SM SF +G G PG+ F++ +
Sbjct: 132 HRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWFFLVSMTQSFVKGTGLPGQAFSNSDTI 191
Query: 182 WLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATFS 241
WL + L+ C R+ + +QT+V ++T+ GVVELGS + +S +LV + F+
Sbjct: 192 WLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFFN 251
Query: 242 SNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEGVPK--IFGQELNNSGHVHTPF 299
N+ A L + + EN P L I + GV + +NN G+ T
Sbjct: 252 FNNGGGEFGSWAFNL---NPDQGEND--PGLWISEP-NGVDSGLVAAPVMNNGGNDSTSN 305
Query: 300 SRE----KLAVRKMEERPSWEAYTNGNRTAFP-GIRNG 332
S KL E P+ + + F GI NG
Sbjct: 306 SDSQPISKLCNGSSVENPNPKVLKSCEMVNFKNGIENG 343
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 363 (132.8 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 93/226 (41%), Positives = 128/226 (56%)
Query: 390 GATSRPNVIARPLNADSEHSDVEASCRDERTGTVE--EXXXXXXXXXXXXXXEEPLNHVE 447
G S V+ N DS+HSD+EAS E VE E EEPLNHVE
Sbjct: 361 GMLSFSTVVRSAAN-DSDHSDLEASVVKEAI-VVEPPEKKPRKRGRKPANGREEPLNHVE 418
Query: 448 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS--- 504
AERQRREKLNQRFY+LRAVVPN+SKMDKASLLGDAI+YINEL++KL+ E+++E +
Sbjct: 419 AERQRREKLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKL 478
Query: 505 ------GN------SRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASR 552
GN SR SN + + + ++D++ +V++RV C HP +R
Sbjct: 479 DGMSKEGNNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGAR 538
Query: 553 VIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAA 598
++A K+ + V + LS ND++ +K GS+ ++L A
Sbjct: 539 FMEALKELDLEVNHASLSVVNDLMIQQATVK-MGSQFFNHDQLKVA 583
Score = 296 (109.3 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 76/206 (36%), Positives = 117/206 (56%)
Query: 48 SDEDLQNKLSDLVDRPNASNFSWNYAIFWQISR---SKSGD--WVLGWGDGSCREPKEGE 102
+++ LQ +L L++ ++ +W YAIFWQIS S +GD +LGWGDG + GE
Sbjct: 48 NEDTLQQRLQALIE---SAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYK----GE 100
Query: 103 ESEATRIPNIRLEDETQQRMRKRVLQKLHTLFGG----SDEDNYALGLDRVTDTEMFFLA 158
E + + N + +Q RKRV+++L++L G SDE N + VTDTE FFL
Sbjct: 101 EDKEKKKNNT---NTAEQEHRKRVIRELNSLISGGIGVSDESND----EEVTDTEWFFLV 153
Query: 159 SMYFSFPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVV 218
SM SF G G PG+ F + + +WL + L+ C R+ + ++T+V I+T GVV
Sbjct: 154 SMTQSFVNGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVV 213
Query: 219 ELGSVRSVPESLELVHSIRATFSSNS 244
ELGS + +S +L+H + F+ N+
Sbjct: 214 ELGSSEVISQSSDLMHKVNNLFNFNN 239
Score = 37 (18.1 bits), Expect = 5.4e-58, Sum P(3) = 5.4e-58
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 328 GIRNGVHGFSWG 339
G NGV SWG
Sbjct: 241 GGNNGVEASSWG 252
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 386 (140.9 bits), Expect = 7.2e-57, Sum P(3) = 7.2e-57
Identities = 97/261 (37%), Positives = 143/261 (54%)
Query: 355 SQTNNLQELVNGVREDFRINHYQSQKPMQMQIDFSGA-TSRPNV-IARPLNADSEHSDVE 412
+++NN + + N++ + + + FS A T+RP+ P ++S+HSD+E
Sbjct: 427 AKSNNQKRSMEATSRASNTNNHPAATANEGMLSFSSAPTTRPSTGTGAPAKSESDHSDLE 486
Query: 413 ASCRDERTGTV------EEXXXXXXXXXXXXXXEEPLNHVEAERQRREKLNQRFYALRAV 466
AS R+ + V E EEPLNHVEAERQRREKLNQRFYALRAV
Sbjct: 487 ASVREVESSRVVAPPPEAEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAV 546
Query: 467 VPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAF-ESNPNVESQN-- 523
VPN+SKMDKASLLGDAI+YINEL+ KL +E ++E L L ++ P S
Sbjct: 547 VPNVSKMDKASLLGDAISYINELRGKLTALETDKETLQSQMESLKKERDARPPAPSGGGG 606
Query: 524 ----RAPDVDIQAA--HDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVF 577
R V+I+A E ++RV C +HPA+R++ A ++ + V + +S D++
Sbjct: 607 DGGARCHAVEIEAKILGLEAMIRVQCHKRNHPAARLMTALRELDLDVYHASVSVVKDLMI 666
Query: 578 HTFVIKSQGSEQLTKEKLIAA 598
+K S ++++L AA
Sbjct: 667 QQVAVK-MASRVYSQDQLNAA 686
Score = 265 (98.3 bits), Expect = 7.2e-57, Sum P(3) = 7.2e-57
Identities = 71/208 (34%), Positives = 111/208 (53%)
Query: 45 AVGSDEDLQNKLSDLVDRPNASNFSWNYAIFWQISRSKS-GDWVLGWGDGSCREPKEGEE 103
A + + LQ +L +++ S +W YAIFWQ S S G +LGWGDG + + +
Sbjct: 61 AAFNQDTLQQRLQSIIE---GSRETWTYAIFWQSSIDVSTGASLLGWGDGYYKGCDDDKR 117
Query: 104 SEATRIPNIRLEDETQQRMRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFS 163
+ + P E E RKRVL++L++L G+ + VTDTE FFL SM S
Sbjct: 118 KQRSSTPAAAAEQEH----RKRVLRELNSLIAGAGAAPDEAVEEEVTDTEWFFLVSMTQS 173
Query: 164 FPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSV 223
FP G G PG+ + + W+ A LSS C R+ A + ++T+V + GV+ELGS
Sbjct: 174 FPNGLGLPGQALFAAQPTWI--ATGLSSAPCDRARQAYTFGLRTMVCLPLATGVLELGST 231
Query: 224 RSVPESLELVHSIRATFSSNSSLATVKP 251
+ ++ + + IRA F+ +++ A+ P
Sbjct: 232 DVIFQTGDSIPRIRALFNLSAAAASSWP 259
Score = 37 (18.1 bits), Expect = 7.2e-57, Sum P(3) = 7.2e-57
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 10 NLWNDEDKAMGAAVLGT 26
NLW D++ +M A + +
Sbjct: 2 NLWTDDNASMMEAFMAS 18
>TAIR|locus:2035609 [details] [associations]
symbol:MYC2 "AT1G32640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009963 "positive regulation of flavonoid biosynthetic process"
evidence=IEP;RCA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
binding transcription factor activity" evidence=IMP] [GO:2000068
"regulation of defense response to insect" evidence=IMP]
[GO:0009611 "response to wounding" evidence=IEP;RCA;TAS]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006612 "protein
targeting to membrane" evidence=RCA] [GO:0009620 "response to
fungus" evidence=RCA] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0009269 "response to desiccation" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634
GO:GO:0045893 GO:GO:0009753 GO:GO:0009611 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0010200
EMBL:AC017118 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0009269
GO:GO:0043619 GO:GO:0051090 eggNOG:NOG295658 GO:GO:0009963
EMBL:X99548 EMBL:AB000875 EMBL:AJ843256 EMBL:AY037203 EMBL:BT003042
EMBL:AF251691 IPI:IPI00543978 PIR:T52293 RefSeq:NP_174541.1
UniGene:At.22648 ProteinModelPortal:Q39204 SMR:Q39204 IntAct:Q39204
STRING:Q39204 PRIDE:Q39204 EnsemblPlants:AT1G32640.1 GeneID:840158
KEGG:ath:AT1G32640 GeneFarm:1895 TAIR:At1g32640 InParanoid:Q39204
KO:K13422 OMA:KRNHPAA PhylomeDB:Q39204 ProtClustDB:CLSN2682813
Genevestigator:Q39204 GermOnline:AT1G32640 GO:GO:2000068
Uniprot:Q39204
Length = 623
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 189/578 (32%), Positives = 281/578 (48%)
Query: 48 SDEDLQNKLSDLVDRPNASNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEAT 107
+ E LQ +L L++ ++ W YAIFWQ S SG VLGWGDG + GEE +A
Sbjct: 64 NQETLQQRLQALIE---GTHEGWTYAIFWQPSYDFSGASVLGWGDGYYK----GEEDKAN 116
Query: 108 ---RIPNIRLEDETQQRMRKRVLQKLHTLF-GGSDEDNYALGLDRVTDTEMFFLASMYFS 163
R + Q RK+VL++L++L GG + A+ + VTDTE FFL SM S
Sbjct: 117 PRRRSSSPPFSTPADQEYRKKVLRELNSLISGGVAPSDDAVD-EEVTDTEWFFLVSMTQS 175
Query: 164 FPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSV 223
F G G GK FA+G VW+ + +LS C R+ + TI I + GVVE+GS
Sbjct: 176 FACGAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGST 235
Query: 224 RSVPESLELVHSIRATFSSNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEGVPK 283
+ +S +L++ +R F+ + + + L + D P++ I D + G P
Sbjct: 236 EPIRQSSDLINKVRILFNFDGGAGDLSGLNWNLDPDQGEND-----PSMWINDPI-GTP- 288
Query: 284 IFGQELNNSGHVHTPFSREKLAVRKME-ERPSWEAYT-NGNRTAFPG-IRNGVHGFSWGN 340
G N G+ P S +L + ++ E S T N N P + + + N
Sbjct: 289 --GS--NEPGN-GAPSSSSQLFSKSIQFENGSSSTITENPNLDPTPSPVHSQTQNPKFNN 343
Query: 341 VQGVKQGIATEIFGSQTNNLQELVNGVREDFRINHYQSQKPMQMQIDFSGATSRPNVIA- 399
+ +T E++N E R + Q F R V+
Sbjct: 344 TFSRELNFSTSSSTLVKPRSGEILNFGDEGKRSSGNPDPSSYSGQTQFENKRKRSMVLNE 403
Query: 400 -RPLN------ADSEHSDVEASCRDERTGTVEEXXXXXXXXXXXXXXEEPLNHVEAERQR 452
+ L+ +S+HSD+EAS E E EEPLNHVEAERQR
Sbjct: 404 DKVLSFGDKTAGESDHSDLEASVVKE---VAVEKRPKKRGRKPANGREEPLNHVEAERQR 460
Query: 453 REKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER---EN------- 502
REKLNQRFYALRAVVPN+SKMDKASLLGDAIAYINEL++K+ E+E+ +N
Sbjct: 461 REKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKL 520
Query: 503 -LSGNSRDLSAFESNPNVES-QNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDA 560
L+G S + + + S + +++++ + ++RV +HPA+R++ A D
Sbjct: 521 ELAGRKASASGGDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDL 580
Query: 561 QITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAA 598
++ V + +S ND++ +K G T+E+L A+
Sbjct: 581 ELEVNHASMSVVNDLMIQQATVK-MGFRIYTQEQLRAS 617
>TAIR|locus:2172932 [details] [associations]
symbol:NIG1 "AT5G46830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0005509
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238207 InterPro:IPR025610 Pfam:PF14215 GO:GO:0042538
EMBL:AF252636 EMBL:AB022221 IPI:IPI00544679 RefSeq:NP_199495.1
UniGene:At.28311 ProteinModelPortal:Q9LUK7 SMR:Q9LUK7
EnsemblPlants:AT5G46830.1 GeneID:834727 KEGG:ath:AT5G46830
TAIR:At5g46830 eggNOG:NOG258937 InParanoid:Q9LUK7 OMA:HVEAERM
PhylomeDB:Q9LUK7 ProtClustDB:CLSN2914881 ArrayExpress:Q9LUK7
Genevestigator:Q9LUK7 Uniprot:Q9LUK7
Length = 511
Score = 291 (107.5 bits), Expect = 5.0e-41, Sum P(2) = 5.0e-41
Identities = 68/165 (41%), Positives = 103/165 (62%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
++PLNHVEAER RREKLN RFYALRAVVPN+SKMDK SLL DA+ YINEL++K + +E E
Sbjct: 339 DKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAENVELE 398
Query: 500 RENLSGNSRDLS--AFESN--PNV-ESQNRAPD---VDIQAAH-DEVVVRVSCPLDSHPA 550
+ + +L A + N P+V + + +A + ++++ D+ +VRV D HP
Sbjct: 399 KHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRKDHHPG 458
Query: 551 SRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKL 595
+R++ A D ++ V + +S ND++ +K G +E+L
Sbjct: 459 ARLMNALMDLELEVNHASISVMNDLMIQQANVK-MGLRIYKQEEL 502
Score = 215 (80.7 bits), Expect = 5.0e-41, Sum P(2) = 5.0e-41
Identities = 68/218 (31%), Positives = 102/218 (46%)
Query: 32 LLTSSISNENLLMAVGSDEDLQNKLSDLVDRPNASNFSWNYAIFWQISRSK-SGDWVLGW 90
LLTS S L + + L +L ++ N ++ W+YAIFW+ S SG+ VL W
Sbjct: 14 LLTSDPSPPLLPANLSLETTLPKRLHAVL---NGTHEPWSYAIFWKPSYDDFSGEAVLKW 70
Query: 91 GDGSCREPKEGEESEATRIPNIRLEDETQQRMRKRVLQKLHTLFGGSD----EDNYALGL 146
GDG E + R L ++ R V+++L+ + G ED+ +
Sbjct: 71 GDGVYTGGNEEKTRGRLRRKKTILSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDD 130
Query: 147 D-RVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARI 205
D VTD E FFL SM +SF G G GK FAS V + + + C R+ +
Sbjct: 131 DVEVTDMEWFFLVSMTWSFGNGSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGL 190
Query: 206 QTIVLISTDAGVVELGSVRSVPESLELVHSIRATFSSN 243
QTI+ I + GV+EL S + + +L + IR F +
Sbjct: 191 QTILCIPSHNGVLELASTEEIRPNSDLFNRIRFLFGGS 228
>TAIR|locus:2130619 [details] [associations]
symbol:AT4G16430 "AT4G16430" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:Z97341 EMBL:AL161544
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251688 EMBL:AF428368
EMBL:AY057626 EMBL:BT002301 IPI:IPI00546344 PIR:A71431
RefSeq:NP_193376.1 UniGene:At.33082 UniGene:At.4413
ProteinModelPortal:O23487 SMR:O23487 STRING:O23487 PaxDb:O23487
PRIDE:O23487 EnsemblPlants:AT4G16430.1 GeneID:827337
KEGG:ath:AT4G16430 TAIR:At4g16430 eggNOG:NOG246663
InParanoid:O23487 OMA:RSMSINF PhylomeDB:O23487
ProtClustDB:CLSN2685658 Genevestigator:O23487 Uniprot:O23487
Length = 467
Score = 411 (149.7 bits), Expect = 2.5e-38, P = 2.5e-38
Identities = 112/331 (33%), Positives = 174/331 (52%)
Query: 7 MGGNLW-NDEDKAMGAAVLGTRAFDYLL-TSSISNENL--LMAVGSDEDLQNKLSDLVDR 62
MG W N ED+AM + +G+ A D+ + T+S SN L L++ SD +LQ L +V+
Sbjct: 1 MGQKFWENQEDRAMVESTIGSEACDFFISTASASNTALSKLVSPPSDSNLQQGLRHVVEG 60
Query: 63 PNASNFSWNYAIFWQISRSKSGDW-VLGWGDGSCREPKEGEESEATRIPNIRLEDETQQ- 120
+ W+YA+FW S S D VL WGDG CR K+G E D +QQ
Sbjct: 61 SD-----WDYALFWLASNVNSSDGCVLIWGDGHCRV-KKGASGE----------DYSQQD 104
Query: 121 RMRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSF--PRGEGGPGKCFASG 178
+++RVL+KLH F GSDED+ + +TD +MF+LAS+YFSF + GP + SG
Sbjct: 105 EIKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSG 164
Query: 179 KHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRA 238
K +W D S Y VRSFLA+SA QT++ + ++GVVELGS+R +PE ++ +++
Sbjct: 165 KPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDKSVIEMVKS 224
Query: 239 TFSSNS---------------SLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEGVPK 283
F + SL KP ++++ + + +D+ G + + G +
Sbjct: 225 VFGGSDFVQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQ 284
Query: 284 IFGQELNNSGHVHTPFSREKLAVRKMEERPS 314
++G E G T + ++ RK +P+
Sbjct: 285 VYGYE---QGKDETLYLTDEQKPRKRGRKPA 312
Score = 393 (143.4 bits), Expect = 3.3e-36, P = 3.3e-36
Identities = 98/230 (42%), Positives = 133/230 (57%)
Query: 380 KPMQMQIDFSGAT------SRPNVIARPLNADSEHSDVEASCRDERTGTVEEXXXXXXXX 433
KP M I+FS T S + + + ++ E +DE +E
Sbjct: 251 KPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQVYGYEQG-KDETLYLTDEQKPRKRGR 309
Query: 434 XXXXXXEEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKL 493
EE LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLL DAI YI ++Q K+
Sbjct: 310 KPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLADAITYITDMQKKI 369
Query: 494 KVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRV 553
+V E E++ + ESN Q +VD Q HD+ VVR+SCPL++HP S+V
Sbjct: 370 RVYETEKQIMKRR-------ESN-----QITPAEVDYQQRHDDAVVRLSCPLETHPVSKV 417
Query: 554 IQAFKDAQITVVESKLSTGNDMVFHTFVIKSQG---SEQLTKEKLIAAFS 600
IQ ++ ++ +S ++ + V HTF ++ QG +EQL K+KL+A+ S
Sbjct: 418 IQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQL-KDKLLASLS 466
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 257 (95.5 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 65/214 (30%), Positives = 103/214 (48%)
Query: 44 MAVGSDEDLQNKLSDLVDRPNASNFSWNYAIFWQISRSKSGDWVLGWGDGSCR---EPKE 100
MA G + + + L + + N W+Y IFW +S S+ G VL WGDG + ++
Sbjct: 1 MATGENRTVPDNLKKQL-AVSVRNIQWSYGIFWSVSASQPG--VLEWGDGYYNGDIKTRK 57
Query: 101 GEESEATRIPNIRLEDETQQRMRKRVLQKLHTLFGGSDE-----DNYALGLDRVTDTEMF 155
++ +I + LE Q R L + GS + AL + +TDTE +
Sbjct: 58 TIQAAEVKIDQLGLERSEQLRELYESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWY 117
Query: 156 FLASMYFSFPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDA 215
+L M F F GEG PG ++G+ +WL +A S RS LAKSA +QT+V
Sbjct: 118 YLVCMSFVFNIGEGIPGGALSNGEPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLG 177
Query: 216 GVVELGSVRSVPESLELVHSIRATFSSNSSLATV 249
GV+E+G+ + E + ++ S++ F T+
Sbjct: 178 GVLEIGTTEHIKEDMNVIQSVKTLFLEAPPYTTI 211
Score = 176 (67.0 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 34/83 (40%), Positives = 55/83 (66%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
EE NH +E++RREKLN+RF LR+++P+ISK+DK S+L D I Y+ +LQ +++ +E+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESC 460
Query: 500 RENLSGNSRDLSAFESNPNVESQ 522
RE+ +R P+ E +
Sbjct: 461 RESADTETRITMMKRKKPDDEEE 483
Score = 51 (23.0 bits), Expect = 1.8e-19, Sum P(2) = 1.8e-19
Identities = 25/135 (18%), Positives = 56/135 (41%)
Query: 463 LRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSG-NSR----DLSAFESNP 517
L+ + + +++ D I ++ K E ER + + NS+ D++ E P
Sbjct: 447 LQDLQKRVQELESCRESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEP 506
Query: 518 -NVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMV 576
++ ++ I + +EVV+ + C ++ D + + STG+ ++
Sbjct: 507 ADIGYAGLTDNLRISSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLL 566
Query: 577 FHTFVIKSQGSEQLT 591
T K +G++ T
Sbjct: 567 CLTVNCKHKGTKIAT 581
>TAIR|locus:504954829 [details] [associations]
symbol:GL3 "AT5G41315" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0001708 "cell fate specification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009957 "epidermal cell fate
specification" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215
GO:GO:0010091 HSSP:P61244 EMBL:AB006707 eggNOG:NOG320411
HOGENOM:HOG000237985 ProtClustDB:CLSN2682588 GO:GO:0009957
EMBL:AF246291 IPI:IPI00543830 RefSeq:NP_680372.1 UniGene:At.27204
ProteinModelPortal:Q9FN69 SMR:Q9FN69 IntAct:Q9FN69 STRING:Q9FN69
EnsemblPlants:AT5G41315.1 GeneID:834133 KEGG:ath:AT5G41315
TAIR:At5g41315 InParanoid:Q9FN69 OMA:ERTSANC PhylomeDB:Q9FN69
Genevestigator:Q9FN69 Uniprot:Q9FN69
Length = 637
Score = 259 (96.2 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 71/223 (31%), Positives = 109/223 (48%)
Query: 67 NFSWNYAIFWQISRSKSGDWVLGWGDG------SCREPKEGEESEATRIPNIRLEDETQQ 120
N W+Y IFW +S S+SG VL WGDG R+ + E +A ++ R E ++
Sbjct: 24 NIQWSYGIFWSVSASQSG--VLEWGDGYYNGDIKTRKTIQASEIKADQLGLRRSEQLSEL 81
Query: 121 RMRKRVLQKLHT-LFGGSDEDNYA----LGLDRVTDTEMFFLASMYFSFPRGEGGPGKCF 175
V + + + GS A L + + DTE ++L M F F GEG PG+ F
Sbjct: 82 YESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIGEGMPGRTF 141
Query: 176 ASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHS 235
A+G+ +WL +A S RS LAKSA ++T+V GVVE+G+ + E + ++
Sbjct: 142 ANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMNVIQC 201
Query: 236 IRATFSSNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRV 278
++ +F L P A LP S+ +N L P + D +
Sbjct: 202 VKTSF-----LEAPDPYATILPARSDYHIDNVLDPQQILGDEI 239
Score = 164 (62.8 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 30/69 (43%), Positives = 49/69 (71%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
+E NH E++RREKLN+RF LR ++P+I+K+DK S+L D I Y+ EL+ +++ +E+
Sbjct: 437 DETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELESC 496
Query: 500 RENLSGNSR 508
RE+ +R
Sbjct: 497 RESTDTETR 505
Score = 48 (22.0 bits), Expect = 4.2e-32, Sum P(3) = 4.2e-32
Identities = 20/94 (21%), Positives = 40/94 (42%)
Query: 502 NLSGNSRDLSAF---ESNP-NVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAF 557
N +GN + +S E+ P + ++ I + +EVV+ + C ++
Sbjct: 529 NETGNGKKVSVNNVGEAEPADTGFTGLTDNLRIGSFGNEVVIELRCAWREGVLLEIMDVI 588
Query: 558 KDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLT 591
D + + STG+ ++ T K +GS+ T
Sbjct: 589 SDLHLDSHSVQSSTGDGLLCLTVNCKHKGSKIAT 622
>TAIR|locus:2118524 [details] [associations]
symbol:TT8 "AT4G09820" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0009962 "regulation of flavonoid
biosynthetic process" evidence=TAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:2000029 "regulation
of proanthocyanidin biosynthetic process" evidence=IEP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL161516 GO:GO:0009813
EMBL:AL049482 HOGENOM:HOG000237985 GO:GO:0010026 GO:GO:2000029
EMBL:AJ277509 EMBL:DQ446813 EMBL:DQ653187 IPI:IPI00530243
RefSeq:NP_192720.2 UniGene:At.10175 ProteinModelPortal:Q9FT81
SMR:Q9FT81 IntAct:Q9FT81 STRING:Q9FT81 PaxDb:Q9FT81 PRIDE:Q9FT81
EnsemblPlants:AT4G09820.1 GeneID:826571 KEGG:ath:AT4G09820
TAIR:At4g09820 eggNOG:NOG249918 InParanoid:Q9FT81 OMA:NEVDSKT
PhylomeDB:Q9FT81 ProtClustDB:CLSN2681600 Genevestigator:Q9FT81
Uniprot:Q9FT81
Length = 518
Score = 247 (92.0 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 74/240 (30%), Positives = 118/240 (49%)
Query: 70 WNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQRMRKRVLQK 129
W Y++FWQ + VL WG+G + ++ T+ + E+ +R ++ L++
Sbjct: 33 WTYSVFWQFCPQQR---VLVWGNGYYNGAIKTRKT--TQPAEVTAEEAALERSQQ--LRE 85
Query: 130 LH-TLFGGSDEDNY----ALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHVWLL 184
L+ TL G AL + +T+TE F+L + FSFP G PGK +A KHVWL
Sbjct: 86 LYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARRKHVWLS 145
Query: 185 DALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATFSSNS 244
A ++ S R+ LAKSA+IQT+V I GVVELG+ + V E +E V ++ F +
Sbjct: 146 GANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFFYDHC 205
Query: 245 SLATVKPMAV---ALPVTSEKKDENGLFPNLGILDRVE-GVPK---IFGQELNNSGHVHT 297
KP V E +DE + + + + + G P + Q L++ H+ +
Sbjct: 206 K-TNPKPALSEHSTYEVHEEAEDEEEVEEEMTMSEEMRLGSPDDEDVSNQNLHSDLHIES 264
Score = 174 (66.3 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
Identities = 32/57 (56%), Positives = 46/57 (80%)
Query: 441 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVME 497
E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD IAY+N L+ ++ +E
Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>UNIPROTKB|Q948Y2 [details] [associations]
symbol:Plw-OSB2 "R-type basic helix-loop-helix protein"
species:4530 "Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 HOGENOM:HOG000237985 EMBL:AB021080
ProteinModelPortal:Q948Y2 Gramene:Q948Y2 Genevestigator:Q948Y2
Uniprot:Q948Y2
Length = 451
Score = 241 (89.9 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 73/215 (33%), Positives = 107/215 (49%)
Query: 67 NFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQRM---R 123
+ SW+Y IFW S S G VL W DG GE + +I N LED T ++ R
Sbjct: 29 SISWSYTIFWSTSTSLPG--VLTWNDGFYN----GEV-KTRKISN--LEDLTADQLVLRR 79
Query: 124 KRVLQKLH-TLFGGSDEDNY-----ALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFAS 177
L +L+ +L G + AL + + DTE +++ M ++F G+G PG+ +AS
Sbjct: 80 SEQLSELYYSLLSGECDHRARKPVAALSPEDIADTEWYYVVCMTYAFRPGQGLPGRSYAS 139
Query: 178 GKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIR 237
+ VWL +A S +R+ LAKSA IQTIV I +GV+ELG+ V E LV+ I
Sbjct: 140 NRSVWLCNAQSADSKTFLRALLAKSASIQTIVCIPFMSGVLELGTTDPVSEDPNLVNRIV 199
Query: 238 ATFSSNSSLATVKPMAVALPVTSEKKDENGLFPNL 272
A + + + P E +D + +F L
Sbjct: 200 A-YLKELQFPICLEVPSSTPSPDETEDADTVFDGL 233
Score = 145 (56.1 bits), Expect = 3.8e-28, Sum P(2) = 3.8e-28
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 386 IDFSGATSRPNVIARPLNADSEHSDVEASCRDERTGTVEEXXXXXXXXXXXXXXEEPLNH 445
+ + A V+A P+ A E + T + +H
Sbjct: 320 VSWKRANPAEKVVAVPMTAGIESQKLLKKAVGGGTAWMSNIDDRGSVAITTTPGSNIKSH 379
Query: 446 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSG 505
V +ER+RREKLN+ F L++++P++ K+DKAS+L + I Y LKV+E + L
Sbjct: 380 VMSERRRREKLNEMFLILKSLLPSVRKVDKASILAETITY-------LKVLEKRVKELES 432
Query: 506 NSRDLSAFESNPNVESQNRAP 526
+SR+ S + P Q +AP
Sbjct: 433 SSREPSRWR--PTEIGQGKAP 451
>TAIR|locus:2134583 [details] [associations]
symbol:AT4G00870 "AT4G00870" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161472 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 EMBL:AF013294 EMBL:AJ519812 IPI:IPI00537799 PIR:T01559
RefSeq:NP_567195.1 UniGene:At.34506 ProteinModelPortal:O23090
SMR:O23090 EnsemblPlants:AT4G00870.1 GeneID:827990
KEGG:ath:AT4G00870 TAIR:At4g00870 eggNOG:NOG285642
InParanoid:O23090 OMA:SIECELM PhylomeDB:O23090
ProtClustDB:CLSN2917469 Genevestigator:O23090 Uniprot:O23090
Length = 423
Score = 247 (92.0 bits), Expect = 5.8e-26, Sum P(3) = 5.8e-26
Identities = 57/154 (37%), Positives = 89/154 (57%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKL--------- 493
L+HVEAE+QRREKLN RFYALRA+VP +S+MDKASLL DA++YI L++K+
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 494 -KVMEAER-ENLSGNSRDLSA-FESNPNVESQNRAPDVDIQA--AHDEVVVRVSCPLDSH 548
K+ E ++ +N S N+ S ++ N NR D+++Q +E ++RV +H
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNH 367
Query: 549 PASRVIQAFKDAQITVVESKLSTGNDMVFHTFVI 582
P S ++ A + V + S + ++ V+
Sbjct: 368 PTSALMSALMEMDCRVQHANASRLSQVMVQDVVV 401
Score = 95 (38.5 bits), Expect = 5.8e-26, Sum P(3) = 5.8e-26
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 144 LGLDRVTDTEMFFLASMYFSFPRGEG-GPGKCFASGKHVWLL--DALKLSSDYCVRSFLA 200
L +D D E+F+ AS Y GE P K + VWL D L+ S+ Y R+ A
Sbjct: 97 LMMDGGDDLELFYAASFY-----GEDRSPRKEVSDESLVWLTGPDELRFSN-Y-ERAKEA 149
Query: 201 KSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATFSSNSS 245
+ T+V I + G++ELGS S+ ++ ++ +++ F S +
Sbjct: 150 GFHGVHTLVSIPINNGIIELGSSESIIQNRNFINRVKSIFGSGKT 194
Score = 75 (31.5 bits), Expect = 6.7e-24, Sum P(3) = 6.7e-24
Identities = 31/128 (24%), Positives = 57/128 (44%)
Query: 163 SFPRGEGGPGKCFASGKHVWLL--DALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVEL 220
SF + P K + VWL D L+ S+ Y R+ A + T+V I + G++EL
Sbjct: 112 SFYGEDRSPRKEVSDESLVWLTGPDELRFSN-Y-ERAKEAGFHGVHTLVSIPINNGIIEL 169
Query: 221 GSVRSVPESLELVHSIRATFSSNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEG 280
GS S+ ++ ++ +++ F S T++ ++ G +P + D +
Sbjct: 170 GSSESIIQNRNFINRVKSIFGSGK--------------TTKHTNQTGSYPKPAVSDHSKS 215
Query: 281 VPKIFGQE 288
+ FG E
Sbjct: 216 GNQQFGSE 223
Score = 56 (24.8 bits), Expect = 5.8e-26, Sum P(3) = 5.8e-26
Identities = 19/58 (32%), Positives = 24/58 (41%)
Query: 52 LQNKLSDLVDRPNASNFSWNYAIFWQ-ISRSKSGDWVLGWGDGS-CREPKEGEESEAT 107
LQ KL +V+ S W Y IFWQ + +S L W DG C + T
Sbjct: 35 LQQKLRFVVE---TSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKNNNSQENYT 89
>UNIPROTKB|Q7XPS7 [details] [associations]
symbol:OSJNBa0065O17.4 "OSJNBa0065O17.4 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AL606682
ProteinModelPortal:Q7XPS7 Gramene:Q7XPS7 Uniprot:Q7XPS7
Length = 567
Score = 187 (70.9 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 55/162 (33%), Positives = 83/162 (51%)
Query: 67 NFSWNYAIFWQISRSKSGDWVLGWGDGSCREP-KEGEESEATRIPNIRLEDETQQRMRKR 125
+ SW+YAIFW IS S G VL W DG K + S + + +L + +++R
Sbjct: 29 SISWSYAIFWSISTSCPG--VLTWNDGFYNGVVKTRKISNSADLTAGQLVVQRSEQLR-- 84
Query: 126 VLQKLHTLFGGSDEDNY-----ALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKH 180
+ ++L G + AL + + DTE +++ M +SF G+G PGK +AS
Sbjct: 85 --ELYYSLLSGECDHRARRPIAALSPEDLADTEWYYVVCMTYSFQPGQGLPGKSYASNAS 142
Query: 181 VWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGS 222
VWL +A S +RS LAK TI+ I +GV+ELG+
Sbjct: 143 VWLRNAQSADSKTFLRSLLAK-----TIICIPFTSGVLELGT 179
Score = 156 (60.0 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 29/58 (50%), Positives = 45/58 (77%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
NHV +ER+RREKLN+ F L+++VP+I K+DKAS+L + IAY+ L+ ++K +E+ E
Sbjct: 392 NHVISERRRREKLNEMFLILKSIVPSIHKVDKASILEETIAYLKVLEKRVKELESSSE 449
>TAIR|locus:2127023 [details] [associations]
symbol:ATMYC1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048629 "trichome
patterning" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=RCA] [GO:0009913 "epidermal cell differentiation"
evidence=RCA] [GO:0009957 "epidermal cell fate specification"
evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 EMBL:CP002687
GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 GO:GO:0048629 IPI:IPI00938615 RefSeq:NP_001154194.1
UniGene:At.28313 ProteinModelPortal:F4JHC4 SMR:F4JHC4
EnsemblPlants:AT4G00480.2 GeneID:827965 KEGG:ath:AT4G00480
OMA:FWSLSTR Uniprot:F4JHC4
Length = 580
Score = 188 (71.2 bits), Expect = 8.5e-18, Sum P(3) = 8.5e-18
Identities = 67/226 (29%), Positives = 108/226 (47%)
Query: 70 WNYAIFWQISRSKSGDWVLGWGDGSCR-EPKEGEESEATRIPNIRLEDETQQRMRKRVLQ 128
W+YAIFW S ++ G VL WG+G + K+ ++S + + + + + +RK L
Sbjct: 36 WSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYES---HYKYGLQKSKELRKLYLS 90
Query: 129 KLHTLFG----------GSDEDN-----YALGLDRVTDTEMFFLASMYFSFPRGEGGPGK 173
L G D+DN L D ++D E ++L SM + F + PG+
Sbjct: 91 MLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVFSPSQCLPGR 150
Query: 174 CFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELV 233
A+G+ +WL +A + RS LA+SA IQT+V GV+ELG + E L+
Sbjct: 151 ASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVTELISEDHNLL 210
Query: 234 HSIRATF---SSNSSLATVKPMAVALPVTSEKKDENGLFPNLGILD 276
+I++ S++ K M + + SE+K + P LGI D
Sbjct: 211 RNIKSCLMEISAHQDNDDEKKMEIKI---SEEKHQ---LP-LGISD 249
Score = 107 (42.7 bits), Expect = 8.5e-18, Sum P(3) = 8.5e-18
Identities = 20/56 (35%), Positives = 39/56 (69%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEA 498
LN + +R+E N++F LR +VP ++++DK S+L + I Y+ EL+A+++ +E+
Sbjct: 338 LNQDDPSDRRKE--NEKFSVLRTMVPTVNEVDKESILNNTIKYLQELEARVEELES 391
Score = 43 (20.2 bits), Expect = 8.5e-18, Sum P(3) = 8.5e-18
Identities = 16/91 (17%), Positives = 33/91 (36%)
Query: 501 ENLSGNSRDLSAFESNPNVESQ----NRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQA 556
E SGN D + + N Q + ++ EVV+ V C + + +++
Sbjct: 416 EETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSYRDYIVADIMET 475
Query: 557 FKDAQITVVESKLSTGNDMVFHTFVIKSQGS 587
+ + + T N + K +G+
Sbjct: 476 LSNLHMDAFSVRSHTLNKFLTLNLKAKFRGA 506
>UNIPROTKB|Q6ZBI4 [details] [associations]
symbol:P0623F08.11 "Phaseolin G-box binding protein
PG1-like" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AP003914 EMBL:AP004632
EnsemblPlants:LOC_Os08g43070.1 KEGG:dosa:Os08t0543700-00
OMA:PVISHVE Uniprot:Q6ZBI4
Length = 263
Score = 202 (76.2 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 49/133 (36%), Positives = 79/133 (59%)
Query: 442 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE-- 499
P+ HVEAERQRREKLN+RF LRA VP +S+MDKASLL DA+ YI EL+ +++ +EAE
Sbjct: 92 PIGHVEAERQRREKLNRRFCELRAAVPTVSRMDKASLLADAVDYIAELRRRVERLEAEAR 151
Query: 500 RENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDS--HPASRVIQAF 557
R L+ ++ +A+ + + R V D ++R++ + H +R++ A
Sbjct: 152 RAPLAPSAAAAAAWAAGLGAGAIGRDDLVVRMIGRDAAILRLTTAAAAARHAPARMMCAV 211
Query: 558 KDAQITVVESKLS 570
+ + V + ++
Sbjct: 212 RALNLAVQHASVA 224
>UNIPROTKB|Q84R79 [details] [associations]
symbol:OSJNBb0113I20.1 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R79 Gramene:Q84R79
Uniprot:Q84R79
Length = 301
Score = 207 (77.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 55/194 (28%), Positives = 96/194 (49%)
Query: 382 MQMQIDFSGATSR-PNVIARPLNADSEHSDVEASCRDERTGTVEEXXXXXXXXXXXXXXE 440
+ + +D G SR PN ARP + +++ D +V
Sbjct: 68 LAVAVDEHGGWSRSPNPGARPPSGGCGSNNLPLMSWDFSAASVAVQEDLGAHGGAAAAYA 127
Query: 441 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+ L HV AER+RREK+NQRF L AV+P + KMDKA++L DA +YI ELQ KLK +E
Sbjct: 128 Q-LEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIRELQEKLKALE--- 183
Query: 501 ENLSGNSRDLSAFESNPNVESQNRAP---DVDIQAA--HDEVVVRVSCPLDSHPASRVIQ 555
E + + + +P + N P +++++ + ++ V+VR+ C R++
Sbjct: 184 EQAAARVTEAAMATPSP-ARAMNHLPVPPEIEVRCSPTNNVVMVRIHCENGEGVIVRILA 242
Query: 556 AFKDAQITVVESKL 569
++ + ++ + +
Sbjct: 243 EVEEIHLRIINANV 256
>UNIPROTKB|Q69IU0 [details] [associations]
symbol:P0498F03.15 "Putative MYC-related DNA binding
protein RD22BP1" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP006525 EMBL:AP007254
RefSeq:NP_001063693.1 UniGene:Os.86289
EnsemblPlants:LOC_Os09g34330.1 GeneID:4347601 KEGG:osa:4347601
OMA:GPTVSHV ProtClustDB:CLSN2725166 Uniprot:Q69IU0
Length = 284
Score = 193 (73.0 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 50/133 (37%), Positives = 74/133 (55%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAEREN 502
++HVEAERQRREKLN+RF LRA VP +S+MDKASLL DA AYI EL+A++ +E++
Sbjct: 110 VSHVEAERQRREKLNRRFCDLRAAVPTVSRMDKASLLADAAAYIAELRARVARLESDARQ 169
Query: 503 LSGNSRDLSAFESNPNVESQN------RAPDVD--IQA---AHDEVVVRVSCPLDSHPAS 551
+ + S+ N AP +D ++ D VRV+ H +
Sbjct: 170 AAAARFEPSSCGGGGNASYHGGGGGGGAAPGLDEAVEVRKMGRDAAAVRVTTTGARHAPA 229
Query: 552 RVIQAFKDAQITV 564
R++ A + ++ V
Sbjct: 230 RLMGALRSLELPV 242
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 196 (74.1 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 41/106 (38%), Positives = 64/106 (60%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAEREN- 502
+H+ AER+RREK+NQRF L V+P + KMDKA++LGDA+ Y+ ELQ K+K +E E
Sbjct: 167 DHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGG 226
Query: 503 ----LSGNSRDLSAFESNP-NVESQNRAPDVDIQAAHDEVVVRVSC 543
+ S +S + + + R P+++++ V+VRV C
Sbjct: 227 RPAAMVVRKSSCSGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQC 272
>UNIPROTKB|Q84LF9 [details] [associations]
symbol:RERJ1 "Transcription Factor" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P01106 EMBL:AB040744
ProteinModelPortal:Q84LF9 Gramene:Q84LF9 Genevestigator:Q84LF9
Uniprot:Q84LF9
Length = 310
Score = 158 (60.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Query: 449 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL-SGNS 507
ER RR KLN++ YALR+VVPNI+KMDKAS++ DAI YI LQA+ + M E L S +
Sbjct: 98 ERDRRRKLNEKLYALRSVVPNITKMDKASIIKDAIEYIQRLQAEEQQMLREVAALESAAA 157
Query: 508 RDLSAFESNP 517
+ +NP
Sbjct: 158 ASAAPAAANP 167
Score = 71 (30.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 525 APDVDIQAAH-----DEV-VVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFH 578
AP V+IQ D V VV V+C +RV +A ++ ++ V+ + +++ H
Sbjct: 214 APPVEIQELRVSEVGDRVLVVSVTCSKRRDAMARVCRALEELRLRVITANITSVAGCPMH 273
Query: 579 TFVIKSQGSEQLTKEKLI-AAFSCESSSIQPLSSV 612
T ++ + + ++++ AA S ++ PLSS+
Sbjct: 274 TLFVEVDHMDSVQMKQMVEAALSQLVATGSPLSSM 308
>TAIR|locus:2039445 [details] [associations]
symbol:AMS "AT2G16910" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009555 "pollen development" evidence=IMP] [GO:0048658 "tapetal
layer development" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC005167 EMBL:AF488565 IPI:IPI00529182 PIR:G84545
RefSeq:NP_179283.2 UniGene:At.48482 UniGene:At.70395
ProteinModelPortal:Q9ZVX2 SMR:Q9ZVX2 STRING:Q9ZVX2 PRIDE:Q9ZVX2
EnsemblPlants:AT2G16910.1 GeneID:816194 KEGG:ath:AT2G16910
TAIR:At2g16910 eggNOG:NOG313389 HOGENOM:HOG000033929
InParanoid:Q9ZVX2 OMA:PRTKSCE PhylomeDB:Q9ZVX2
ProtClustDB:CLSN2690121 ArrayExpress:Q9ZVX2 Genevestigator:Q9ZVX2
GO:GO:0048658 Uniprot:Q9ZVX2
Length = 571
Score = 170 (64.9 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 42/105 (40%), Positives = 63/105 (60%)
Query: 448 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS--- 504
AER+RR+KLN R YALR++VP I+K+D+AS+LGDAI Y+ ELQ + K ++ E E S
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETE 377
Query: 505 -GNSRDLSAFESN--------PNVESQNRAP----DVDIQAAHDE 536
G++R N P + + P DVD++ ++D+
Sbjct: 378 DGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDK 422
Score = 53 (23.7 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 49 DEDLQNKLSDLVDRPNASNFSWNYAIFWQISRSK 82
+ ++QN L L RP +W+Y + W+++ +
Sbjct: 2 ESNMQNLLEKL--RPLVGARAWDYCVLWRLNEDQ 33
Score = 52 (23.4 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 24/78 (30%), Positives = 37/78 (47%)
Query: 156 FLASMYFSFPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDA 215
FL+ + S P G + + + WL + SS+ SF+ ++ I T VLI
Sbjct: 77 FLSHLPASIPLDSGIYAETLLTNQTGWLSE----SSE---PSFMQET--ICTRVLIPIPG 127
Query: 216 GVVELGSVRSVPESLELV 233
G+VEL + R V E +V
Sbjct: 128 GLVELFATRHVAEDQNVV 145
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 182 (69.1 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 43/113 (38%), Positives = 67/113 (59%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE----- 499
H+ AER+RREKL+QRF AL +VP + KMDKAS+LGDAI Y+ +LQ ++K +E E
Sbjct: 182 HILAERKRREKLSQRFIALSKIVPGLKKMDKASVLGDAIKYVKQLQDQVKGLEEEARRRP 241
Query: 500 --------RENLSGNSRDLSAFESN-PNVESQNRAPDVDIQAAHDEVVVRVSC 543
+ LS + D S+ + N E+ P+++ + + V+V++ C
Sbjct: 242 VEAAVLVKKSQLSADDDDGSSCDENFDGGEATAGLPEIEARVSERTVLVKIHC 294
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 176 (67.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 42/142 (29%), Positives = 77/142 (54%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAEREN- 502
+H+ AER+RREKL QRF AL A++P + KMDKAS+LGDAI +I LQ +K E +++
Sbjct: 126 DHILAERKRREKLTQRFVALSALIPGLKKMDKASVLGDAIKHIKYLQESVKEYEEQKKEK 185
Query: 503 --------------LSGNSRDLSAFESNPNVESQN-RAPDVDIQAAHDEVVVRVSCPLDS 547
L N + S+ S+ N S + P+++++ + +V++++ C
Sbjct: 186 TMESVVLVKKSSLVLDENHQPSSSSSSDGNRNSSSSNLPEIEVRVSGKDVLIKILCEKQK 245
Query: 548 HPASRVIQAFKDAQITVVESKL 569
+++ + +++ S +
Sbjct: 246 GNVIKIMGEIEKLGLSITNSNV 267
>UNIPROTKB|Q6YUS3 [details] [associations]
symbol:OSJNBb0088N06.15 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] [GO:0048653
"anther development" evidence=IMP] [GO:0048654 "anther
morphogenesis" evidence=IMP] [GO:0048657 "tapetal cell
differentiation" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG313389
HOGENOM:HOG000033929 OMA:PRTKSCE EMBL:AP008208 EMBL:CM000139
GO:GO:0048657 EMBL:AP004078 EMBL:AP005851 RefSeq:NP_001045710.1
UniGene:Os.50000 EnsemblPlants:LOC_Os02g02820.1 GeneID:4328113
KEGG:osa:4328113 ProtClustDB:CLSN2692391 Uniprot:Q6YUS3
Length = 552
Score = 165 (63.1 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 33/58 (56%), Positives = 47/58 (81%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAEREN 502
++EAER+RR+KLN Y LR++VPNI+KMD+AS+LGDAI YI LQ ++K ++ E E+
Sbjct: 286 NLEAERKRRKKLNGHLYKLRSLVPNITKMDRASILGDAIDYIVGLQKQVKELQDELED 343
Score = 65 (27.9 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 27/116 (23%), Positives = 46/116 (39%)
Query: 30 DYLLTSSISNENLLMAVGSDEDLQNKLSDLVDRPNASNFSWNYAIFWQISRSKSGDWVLG 89
D+LL + N N A + L D RP + W+Y I+W++S + + G
Sbjct: 5 DHLL---MKNSNAAAAAAAVNGGGTSL-DAALRPLVGSDGWDYCIYWRLSPDQRFLEMTG 60
Query: 90 WGDGSCREPKEGEESEATRIPNIRLEDETQQRMRKRVLQKLHTLFGGSDEDNYALG 145
+ C E + S +P+ D + M + L ++ S E+ A G
Sbjct: 61 F---CCSSELEAQVSALLDLPSSIPLDSSSIGMHAQALLSNQPIWQSSSEEEEADG 113
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 206 QTIVLISTDAGVVELGSVRSVPESLELVHSIRA 238
+T +L+ G+VEL + R + E ++ + A
Sbjct: 118 KTRLLVPVAGGLVELFASRYMAEEQQMAELVMA 150
>TAIR|locus:2137574 [details] [associations]
symbol:AT4G37850 "AT4G37850" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL035709
EMBL:AL161592 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
ProtClustDB:CLSN2690865 EMBL:AF488567 IPI:IPI00544527 PIR:T06032
RefSeq:NP_195498.3 UniGene:At.31223 ProteinModelPortal:Q9T072
SMR:Q9T072 EnsemblPlants:AT4G37850.1 GeneID:829941
KEGG:ath:AT4G37850 TAIR:At4g37850 eggNOG:NOG262524
InParanoid:Q8S3F0 PhylomeDB:Q9T072 Genevestigator:Q9T072
Uniprot:Q9T072
Length = 328
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 44/161 (27%), Positives = 85/161 (52%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
+H+ AER+RREKL QRF AL A+VP + KMDKAS+LGDA+ +I LQ ++ +E +++
Sbjct: 152 DHIIAERKRREKLTQRFVALSALVPGLKKMDKASVLGDALKHIKYLQERVGELEEQKKER 211
Query: 504 SGNSRDL---SAFESNPNVESQNRA----------PDVDIQAAHDEVVVRVSCPLDSHPA 550
S L S + N +S + + P+++++ + ++V++++ C
Sbjct: 212 RLESMVLVKKSKLILDDNNQSFSSSCEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHL 271
Query: 551 SRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLT 591
++++ + I + S + + T + K + +T
Sbjct: 272 AKIMAEIEKLHILITNSSVLNFGPTLDITIIAKKESDFDMT 312
>TAIR|locus:2142419 [details] [associations]
symbol:AT5G10570 "AT5G10570" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL353995 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488594 IPI:IPI00529696 PIR:T49982
RefSeq:NP_196619.1 UniGene:At.32362 ProteinModelPortal:Q9LXA9
SMR:Q9LXA9 EnsemblPlants:AT5G10570.1 GeneID:830922
KEGG:ath:AT5G10570 TAIR:At5g10570 eggNOG:NOG310833
HOGENOM:HOG000029066 InParanoid:Q9LXA9 OMA:SSAFDYP PhylomeDB:Q9LXA9
ProtClustDB:CLSN2914918 Genevestigator:Q9LXA9 Uniprot:Q9LXA9
Length = 315
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 45/161 (27%), Positives = 82/161 (50%)
Query: 441 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+P ++ AER+RR++LN R LR++VP I+KMD+ S+LGDAI Y+ EL K+ ++ +
Sbjct: 148 QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKELLDKINKLQEDE 207
Query: 501 ENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDA 560
+ L NS LS +N ++ + +VD + + + + CP + +
Sbjct: 208 QELGSNSH-LSTLITNESMVRNSLKFEVDQREVNTHI--DICCPTKPGLVVSTVSTLETL 264
Query: 561 QITVVESKLSTGNDMVFHT--FVIKSQG---SEQLTKEKLI 596
+ + + +S +D F + Q + + TK+ LI
Sbjct: 265 GLEIEQCVISCFSDFSLQASCFEVGEQRYMVTSEATKQALI 305
>TAIR|locus:2155725 [details] [associations]
symbol:bHLH093 "AT5G65640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB026639 HOGENOM:HOG000029066 EMBL:AF488621 EMBL:BT025665
EMBL:AK229018 EMBL:AY085134 IPI:IPI00533579 IPI:IPI00785991
RefSeq:NP_001078801.1 RefSeq:NP_569014.1 UniGene:At.28897
ProteinModelPortal:Q9LSL1 SMR:Q9LSL1 EnsemblPlants:AT5G65640.1
GeneID:836690 KEGG:ath:AT5G65640 TAIR:At5g65640 eggNOG:NOG245311
InParanoid:Q9LSL1 OMA:PLMESDQ PhylomeDB:Q9LSL1
ProtClustDB:CLSN2686406 Genevestigator:Q9LSL1 Uniprot:Q9LSL1
Length = 351
Score = 176 (67.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 47/155 (30%), Positives = 77/155 (49%)
Query: 441 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+P ++ AER+RR++LN R LR++VP ISKMD+ S+LGDAI Y+ EL K+ ++ E
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 501 ENL--SGNSRDLSAF----ESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVI 554
+ L S NS F + N N +P +I ++ V + C +
Sbjct: 235 QELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICCSPKPGLLLSTV 294
Query: 555 QAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQ 589
+ + + + +S +D F S+G+EQ
Sbjct: 295 NTLETLGLEIEQCVISCFSD--FSLQASCSEGAEQ 327
>TAIR|locus:2123954 [details] [associations]
symbol:AT4G29930 "AT4G29930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL161575 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AK117730 EMBL:BT005869 EMBL:AY568654
EMBL:AJ630482 EMBL:AK176201 EMBL:AK176276 EMBL:AK176674
EMBL:AK222212 EMBL:AK228201 EMBL:AF488569 IPI:IPI00516806
IPI:IPI00544272 IPI:IPI00546879 IPI:IPI00892082
RefSeq:NP_001031752.1 RefSeq:NP_001078471.1 RefSeq:NP_001119080.1
RefSeq:NP_194722.2 UniGene:At.44068 ProteinModelPortal:Q700E3
SMR:Q700E3 IntAct:Q700E3 EnsemblPlants:AT4G29930.3 GeneID:829116
KEGG:ath:AT4G29930 TAIR:At4g29930 eggNOG:NOG294060
HOGENOM:HOG000006429 InParanoid:Q8GYC3 OMA:PIENIGE PhylomeDB:Q700E3
ProtClustDB:CLSN2680169 Genevestigator:Q700E3 Uniprot:Q700E3
Length = 263
Score = 169 (64.5 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
+V +ER RR+KLNQR +ALR+VVPNISK+DKAS++ D+I Y+ EL + K +EAE L
Sbjct: 55 NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELE 114
Query: 505 GNS 507
S
Sbjct: 115 SRS 117
>UNIPROTKB|Q8H8E4 [details] [associations]
symbol:OJ1006F06.1 "Putative bHLH transcription protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000029066 EMBL:AC099399 ProteinModelPortal:Q8H8E4
STRING:Q8H8E4 Gramene:Q8H8E4 Uniprot:Q8H8E4
Length = 430
Score = 172 (65.6 bits), Expect = 9.4e-10, P = 9.4e-10
Identities = 43/155 (27%), Positives = 79/155 (50%)
Query: 442 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE-- 499
P ++ AER+RR++LN R LR++VP ISKMD+ S+LGD I Y+ EL ++K +E E
Sbjct: 180 PSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDTIDYVKELTERIKTLEEEIG 239
Query: 500 ---RE-NLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQ 555
E +L +D S+ +N + + DV+ + + + + + CP + +
Sbjct: 240 VTPEELDLLNTMKDSSSGNNNEMLVRNSTKFDVENRGSGN-TRIEICCPANPGVLLSTVS 298
Query: 556 AFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQL 590
A + + + + +S +D ++ G Q+
Sbjct: 299 ALEVLGLEIEQCVVSCFSDFGMQASCLQEDGKRQV 333
>UNIPROTKB|Q2R3F6 [details] [associations]
symbol:Os11g0523700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000010 EMBL:AP008217 GO:GO:0050826
GO:GO:0010440 Gene3D:4.10.280.10 SUPFAM:SSF47459
RefSeq:NP_001067987.2 UniGene:Os.56356
EnsemblPlants:LOC_Os11g32100.1 GeneID:4350609 KEGG:osa:4350609
OMA:DGKDSNA Uniprot:Q2R3F6
Length = 524
Score = 174 (66.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 44/108 (40%), Positives = 60/108 (55%)
Query: 402 LNADSEHSDVEASCRDERTGTVEEXXXXXXXXXXXXXXEE--PLNHVEAERQRREKLNQR 459
LN DSE D E +G +E ++ P ++ AER+RR+KLN R
Sbjct: 297 LNYDSE--DARGG---EDSGAKKESNANSTVTGDGKGKKKGMPAKNLMAERRRRKKLNDR 351
Query: 460 FYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNS 507
Y LR+VVP ISKMD+AS+LGDAI Y+ EL K+ ++ E E+ S
Sbjct: 352 LYMLRSVVPKISKMDRASILGDAIEYLKELLQKINDLQNELESSPATS 399
Score = 42 (19.8 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 15/54 (27%), Positives = 22/54 (40%)
Query: 214 DAGVVELG------SVRSVPESLELVHSIRATFSSNSSLATVKPMAVALPVTSE 261
DAG V G S + S S A FS A ++P+ + PV ++
Sbjct: 186 DAGAVNTGGSSSSSSAAAAAASASAHVSNTAPFSGRGKAAVLRPLDIVPPVGAQ 239
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 36/137 (26%), Positives = 75/137 (54%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE--- 501
HV AER+RREKL+++F AL A++P + K DK ++L DAI+ + +LQ +L+ ++ E+E
Sbjct: 120 HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAISRMKQLQEQLRTLKEEKEATR 179
Query: 502 ---NLSGNSRDLSAFESNPN--------VESQNRAPDVDIQAAHDEVVVRVSCPLDSHPA 550
++ + F+ PN +E P+++ + + +++++R+ C
Sbjct: 180 QMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEAKISQNDILIRILCEKSKGCM 239
Query: 551 SRVIQAFKDAQITVVES 567
++ ++ Q+ + S
Sbjct: 240 INILNTIENFQLRIENS 256
>UNIPROTKB|Q657A4 [details] [associations]
symbol:P0022F12.30 "Regulatory protein B-Peru-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP002908 EMBL:AP003310 EnsemblPlants:LOC_Os01g39580.1
Uniprot:Q657A4
Length = 370
Score = 158 (60.7 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 28/58 (48%), Positives = 47/58 (81%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
NHV +ER+RREKLN+ F L+++VP+I K+DKAS+L + IAY+ EL+ +++ +E+ ++
Sbjct: 188 NHVMSERRRREKLNEMFLILKSLVPSIDKVDKASILSETIAYLKELERRVQELESGKK 245
Score = 50 (22.7 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 17/59 (28%), Positives = 27/59 (45%)
Query: 520 ESQNRAP-DVDIQAAH-DEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMV 576
ESQ P DV + DE+ + V C +RV A K ++ VV + S + ++
Sbjct: 282 ESQEGTPSDVRVIVMDKDELHLEVQCRWKELMMTRVFDAIKSLRLDVVSVQASAPDGLL 340
>UNIPROTKB|Q53L62 [details] [associations]
symbol:LOC_Os11g15210 "Helix-loop-helix DNA-binding domain,
putative" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR025610
Pfam:PF14215 EMBL:AC145364 EnsemblPlants:LOC_Os11g15210.1
KEGG:dosa:Os11t0258700-00 Uniprot:Q53L62
Length = 458
Score = 154 (59.3 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 28/58 (48%), Positives = 45/58 (77%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
NHV +ER+RREKL + F L++VVP+I K+DKAS+L + IAY+ EL+ +++ +E+ +
Sbjct: 244 NHVMSERRRREKLKEMFLILKSVVPSIHKVDKASILAETIAYLKELEKRVEELESSSQ 301
Score = 57 (25.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 200 AKSARIQTIVLISTDA-GVVELGSVRSVPESLELVHSI---------RATFSSNSSLATV 249
++SA I+TIV + GV+ELG+ V E LV I RA FSS + +A +
Sbjct: 13 SQSASIKTIVCVPFIMHGVLELGTTDPVSEDPALVDRITASLWDTPPRAAFSSEAGVADI 72
>TAIR|locus:2090847 [details] [associations]
symbol:ICE1 "AT3G26744" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA;TAS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IEP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0050826 "response to freezing"
evidence=RCA;IMP] [GO:0010440 "stomatal lineage progression"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0009410 "response to xenobiotic
stimulus" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0009933 "meristem structural organization"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
storage" evidence=RCA] [GO:0043687 "post-translational protein
modification" evidence=RCA] [GO:0048522 "positive regulation of
cellular process" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0045893 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0050826 EMBL:AB016889 GO:GO:0010440
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB026648 EMBL:AY195621
EMBL:AY079016 EMBL:BT020379 EMBL:AK228443 IPI:IPI00518051
IPI:IPI00656676 RefSeq:NP_001030774.1 RefSeq:NP_001030776.2
RefSeq:NP_189309.2 UniGene:At.25302 ProteinModelPortal:Q9LSE2
SMR:Q9LSE2 STRING:Q9LSE2 PaxDb:Q9LSE2 PRIDE:Q9LSE2
EnsemblPlants:AT3G26744.1 EnsemblPlants:AT3G26744.2
EnsemblPlants:AT3G26744.4 GeneID:822287 KEGG:ath:AT3G26744
TAIR:At3g26744 eggNOG:NOG236974 HOGENOM:HOG000085036
InParanoid:Q9LSE2 OMA:NSESSGM PhylomeDB:Q9LSE2
ProtClustDB:CLSN2690572 Genevestigator:Q9LSE2 GermOnline:AT3G26744
Uniprot:Q9LSE2
Length = 494
Score = 166 (63.5 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 33/61 (54%), Positives = 45/61 (73%)
Query: 442 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
P ++ AER+RR+KLN R Y LR+VVP ISKMD+AS+LGDAI Y+ EL ++ + E E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
Query: 502 N 502
+
Sbjct: 365 S 365
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 164 (62.8 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAEREN 502
H+ AER+RREK+NQRF L V+P + KMDKA++L DA+ Y+ E+Q KL +E + +N
Sbjct: 193 HIIAERKRREKINQRFIELSTVIPGLKKMDKATILSDAVRYVKEMQEKLSELE-QHQN 249
Score = 40 (19.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 6/27 (22%), Positives = 18/27 (66%)
Query: 515 SNPNVESQNRAPDVDIQAAHDEVVVRV 541
S+ + +++ P+++ + +H V+VR+
Sbjct: 282 SSSSGTARSSLPEIEAKISHGNVMVRI 308
>TAIR|locus:2046198 [details] [associations]
symbol:FRU "AT2G28160" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010039 "response to iron ion" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0034756 "regulation of iron ion
transport" evidence=IMP] [GO:0071281 "cellular response to iron
ion" evidence=IEP] [GO:0071369 "cellular response to ethylene
stimulus" evidence=IEP] [GO:0071732 "cellular response to nitric
oxide" evidence=IEP] [GO:0000041 "transition metal ion transport"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0071281 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AC005851 GO:GO:0071732 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071369 EMBL:AF488570 EMBL:BT026446 IPI:IPI00547189
PIR:E84681 RefSeq:NP_850114.1 UniGene:At.43510
ProteinModelPortal:Q0V7X4 SMR:Q0V7X4 IntAct:Q0V7X4 STRING:Q0V7X4
PaxDb:Q0V7X4 PRIDE:Q0V7X4 EnsemblPlants:AT2G28160.1 GeneID:817362
KEGG:ath:AT2G28160 TAIR:At2g28160 eggNOG:NOG236355
HOGENOM:HOG000006047 InParanoid:Q0V7X4 OMA:NLKLWIT PhylomeDB:Q0V7X4
ProtClustDB:CLSN2690963 Genevestigator:Q0V7X4 GO:GO:0034756
Uniprot:Q0V7X4
Length = 318
Score = 159 (61.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 28/74 (37%), Positives = 52/74 (70%)
Query: 448 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNS 507
+ER+RR ++ + YALR++VPNI+KMDKAS++GDA+ Y+ ELQ++ K ++++ L +
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSDIAGLEASL 194
Query: 508 RDLSAFESN-PNVE 520
++ + P+ +
Sbjct: 195 NSTGGYQEHAPDAQ 208
>UNIPROTKB|Q336V8 [details] [associations]
symbol:Os10g0544200 "Os10g0544200 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000086 EMBL:AP008216
EMBL:CM000147 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG245311
EMBL:AK063669 RefSeq:NP_001065200.1 UniGene:Os.46563
EnsemblPlants:LOC_Os10g39750.1 GeneID:4349271 KEGG:osa:4349271
ProtClustDB:CLSN2693493 Uniprot:Q336V8
Length = 380
Score = 160 (61.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 33/78 (42%), Positives = 52/78 (66%)
Query: 442 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER- 500
P ++ AER+RR++LN R LR+VVP ISKMD+ S+LGD I Y+ EL ++K ++ E
Sbjct: 194 PSKNLMAERRRRKRLNDRLSMLRSVVPRISKMDRTSILGDTIGYVKELMDRIKNLQVEAA 253
Query: 501 --ENLSGNSRDLSAFESN 516
++ S ++ +LS + N
Sbjct: 254 TGDSSSSSTENLSMLKLN 271
>TAIR|locus:2079512 [details] [associations]
symbol:AT3G61950 "AT3G61950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL138642 HOGENOM:HOG000238962 EMBL:AF488600 EMBL:AK118527
EMBL:BT005298 EMBL:AJ630481 EMBL:AY568653 EMBL:AY088741
IPI:IPI00525313 IPI:IPI00529988 PIR:T47987 RefSeq:NP_567121.1
RefSeq:NP_850735.1 UniGene:At.22308 ProteinModelPortal:Q700E4
SMR:Q700E4 IntAct:Q700E4 EnsemblPlants:AT3G61950.1 GeneID:825368
KEGG:ath:AT3G61950 TAIR:At3g61950 eggNOG:NOG324736
InParanoid:Q700E4 OMA:RINHIAV PhylomeDB:Q700E4
ProtClustDB:CLSN2683564 Genevestigator:Q700E4 Uniprot:Q700E4
Length = 358
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 56/238 (23%), Positives = 107/238 (44%)
Query: 378 SQKPMQMQIDFSGAT-SRPNVIARPLNADSEHS-DVEASCRDERTGTVEEXXXXXXXXXX 435
+Q +I FS A + P+ + PL+A S + E T +
Sbjct: 111 NQAVSSQEIPFSQANMTLPSSTSSPLSAHSRRKRKINHLLPQEMTREKRKRRKTKPSKNN 170
Query: 436 XXXXEEPLNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKL 493
+ +NH+ ER RR ++N+ +LRA++P I + D+AS++G AI Y+ L+ +
Sbjct: 171 EEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLEQII 230
Query: 494 KVMEAE-RENLSGNSR-------DLSAFESNP---NVESQNRAPDVDIQAAHDEVVVRVS 542
+ +E++ R NS LS SN +E Q P ++ + V ++V
Sbjct: 231 QSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQNHVSLKVQ 290
Query: 543 CPLDSHPASRVIQAFKDAQITVVESKLSTGN-DMVFHTFVIKSQGSEQL-TKEKLIAA 598
C + I + + ++TV+ ++T + V ++F +K + L + +++ AA
Sbjct: 291 CEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDECDLESADEITAA 348
>UNIPROTKB|Q7XKP5 [details] [associations]
symbol:OSJNBb0013O03.11 "OSJNBb0013O03.11 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 HOGENOM:HOG000006429 EMBL:AL731621
RefSeq:NP_001173851.1 UniGene:Os.98890
EnsemblPlants:LOC_Os04g23440.1 GeneID:9269507 KEGG:osa:9269507
OMA:NIAMERD Genevestigator:Q7XKP5 Uniprot:Q7XKP5
Length = 293
Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 46/126 (36%), Positives = 70/126 (55%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
++ ER RR++LN++ +ALRAVVP I+KMDKAS++ DAIA+I +LQ E ER+ L
Sbjct: 98 NIAMERDRRKRLNEKLFALRAVVPKITKMDKASIVRDAIAHIEKLQ------EEERQLLD 151
Query: 505 GNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVV--VRVSCPLDSHPASRVIQAFKDAQI 562
++S +S V + DVD + +R + PLD + + + QI
Sbjct: 152 ----EISVLQSAAAVAA-TAVEDVDDSGVTMPSMKKLRSTPPLDGGGGALRVASSPPLQI 206
Query: 563 TVVESK 568
VE+K
Sbjct: 207 LEVETK 212
>UNIPROTKB|Q8LSP3 [details] [associations]
symbol:OJ1203D03.3 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC099732
EnsemblPlants:LOC_Os03g12760.1 KEGG:dosa:Os03t0229100-00
HOGENOM:HOG000239880 OMA:DSCLNIT Uniprot:Q8LSP3
Length = 451
Score = 157 (60.3 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/71 (47%), Positives = 45/71 (63%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
HV AER+RREKL Q+F AL +VP + K DK SLLG I Y+ +L+ K+K +E E
Sbjct: 288 HVIAERKRREKLQQQFVALATIVPGLKKTDKISLLGSTIDYVKQLEEKVKALE---EGSR 344
Query: 505 GNSRDLSAFES 515
+ +AFES
Sbjct: 345 RTAEPTTAFES 355
>UNIPROTKB|Q653A4 [details] [associations]
symbol:OSJNBa0043B22.14 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP005470 RefSeq:NP_001174827.1
UniGene:Os.73031 EnsemblPlants:LOC_Os06g33450.2 GeneID:9268477
KEGG:osa:9268477 OMA:YASPAMT Uniprot:Q653A4
Length = 396
Score = 112 (44.5 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 445 HVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
H+ ER RR+++N+ LR+++P + + D+AS++G + YI ELQ L +EA+++
Sbjct: 139 HIAVERNRRKQMNENLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLHSLEAKKQ 197
Score = 90 (36.7 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 25/101 (24%), Positives = 51/101 (50%)
Query: 497 EAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQA 556
E +L + +LSA+ S + PDV ++ A +V++ A ++I A
Sbjct: 289 ETAAPSLDAIAAELSAYASRQALGGGLLLPDVKVEFAGANLVLKTVSQRSPGQAVKIIAA 348
Query: 557 FKDAQITVVESKLSTGNDMVFHTFVIKSQGSE-QLTKEKLI 596
+ + ++ +K+ST +D ++F +K G E +L+ E+L+
Sbjct: 349 LEGRSLEILHAKISTVDDTAVNSFTVKI-GIECELSAEELV 388
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/56 (51%), Positives = 43/56 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER 500
HV AER+RR+KLN+R AL A++P + K DKA++L DAI ++ +LQ ++K +E ER
Sbjct: 133 HVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVKKLEEER 188
>TAIR|locus:2020003 [details] [associations]
symbol:AT1G10610 "AT1G10610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC009398 Gene3D:4.10.280.10
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AC007067
HOGENOM:HOG000033929 EMBL:AK229375 EMBL:AF488620 IPI:IPI00786098
PIR:F86239 RefSeq:NP_172531.2 UniGene:At.42172
ProteinModelPortal:Q0WNR2 SMR:Q0WNR2 EnsemblPlants:AT1G10610.1
GeneID:837604 KEGG:ath:AT1G10610 TAIR:At1g10610 eggNOG:NOG318339
OMA:GIHGEVV PhylomeDB:Q0WNR2 ProtClustDB:CLSN2920225
Genevestigator:Q0WNR2 Uniprot:Q0WNR2
Length = 441
Score = 148 (57.2 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 36/117 (30%), Positives = 68/117 (58%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
++ +ER+RRE++NQ Y LRAVVP I+K++K + DA+ YINEL + + +E E + ++
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDELKGIN 324
Query: 505 G-NSRDLSAFESNP--NVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFK 558
++++A E + + E++ + + + +EV + V + RV+Q K
Sbjct: 325 EMECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHETGERDFLIRVVQEHK 381
Score = 41 (19.5 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 62 RPNASNFSWNYAIFWQISRSKSG--DWV 87
RP + +W+ + W++ S +WV
Sbjct: 15 RPFVDSRTWDLCVIWKLGDDPSRFIEWV 42
Score = 41 (19.5 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 200 AKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSI 236
+K T VL+ G+VEL + P +VH I
Sbjct: 122 SKMEMFSTRVLVPVSDGLVELFAFDMRPFDESMVHLI 158
>TAIR|locus:2141206 [details] [associations]
symbol:DYT1 "AT4G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0048658 "tapetal layer development" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0048658 EMBL:EF637083 EMBL:AL031187
IPI:IPI00519007 PIR:T05175 RefSeq:NP_193864.1 UniGene:At.54456
ProteinModelPortal:O81900 SMR:O81900 EnsemblPlants:AT4G21330.1
GeneID:827883 KEGG:ath:AT4G21330 TAIR:At4g21330 eggNOG:NOG316303
HOGENOM:HOG000112300 InParanoid:O81900 OMA:MEEAPPE PhylomeDB:O81900
ProtClustDB:CLSN2685365 Genevestigator:O81900 Uniprot:O81900
Length = 207
Score = 137 (53.3 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 32/86 (37%), Positives = 55/86 (63%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLK-VMEAERENL 503
++EAER+RREKL+ R ALR+ VP ++ M KAS++ DAI YI ELQ +K ++E E +
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVKNLLETFHE-M 91
Query: 504 SGNSRDLSAFESNPNVESQNRAPDVD 529
++ +++P ++ + D++
Sbjct: 92 EEAPPEIDEEQTDPMIKPEVETSDLN 117
>TAIR|locus:2154197 [details] [associations]
symbol:SPCH "AT5G53210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010374 "stomatal complex development" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
[GO:0042127 "regulation of cell proliferation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB013388 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 GO:GO:0010374 EMBL:DQ868373
EMBL:AJ630498 EMBL:AY568670 IPI:IPI00520239 RefSeq:NP_200133.2
UniGene:At.50528 ProteinModelPortal:Q700C7 SMR:Q700C7 STRING:Q700C7
EnsemblPlants:AT5G53210.1 GeneID:835402 KEGG:ath:AT5G53210
TAIR:At5g53210 eggNOG:NOG325833 InParanoid:Q700C7 OMA:NHESSVI
PhylomeDB:Q700C7 ProtClustDB:CLSN2719098 Genevestigator:Q700C7
Uniprot:Q700C7
Length = 364
Score = 123 (48.4 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 22/64 (34%), Positives = 45/64 (70%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAIAYINELQAKLKVME 497
++ ++HV ER RR+++N+ LR+++P + + D+AS++G + YI+ELQ L+ +E
Sbjct: 99 QQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Query: 498 AERE 501
A+++
Sbjct: 159 AKKQ 162
Score = 63 (27.2 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 19/77 (24%), Positives = 45/77 (58%)
Query: 521 SQNRAPDVDIQAAHDEVVVR-VSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHT 579
S++ DV+++ + V+++ VS + ++I A +D + +++ ++T ++ + ++
Sbjct: 281 SKSALADVEVKFSGANVLLKTVSHKIPGQ-VMKIIAALEDLALEILQVNINTVDETMLNS 339
Query: 580 FVIKSQGSE-QLTKEKL 595
F IK G E QL+ E+L
Sbjct: 340 FTIKI-GIECQLSAEEL 355
>UNIPROTKB|Q5SMX4 [details] [associations]
symbol:P0498B01.36 "cDNA clone:J033115I17, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008207 EMBL:AP003417 EMBL:HQ858870
EMBL:AK102964 RefSeq:NP_001042293.1 UniGene:Os.32770 GeneID:4327325
KEGG:osa:4327325 eggNOG:NOG253236 OMA:GNNGFMC
ProtClustDB:CLSN2691168 Uniprot:Q5SMX4
Length = 439
Score = 144 (55.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAEREN 502
L H+ +ER+RREKLN F AL+AV+P SK DK S+L A Y+ L++KL +E +
Sbjct: 253 LQHMISERKRREKLNDSFLALKAVLPPGSKKDKTSILIRAREYVKSLESKLSELEEKNRE 312
Query: 503 LSGN--SRDLSAFESNPNVESQNRAPDVDIQAAHDEVV 538
L SR +A +++ + AP+ + ++V
Sbjct: 313 LEARLASRPAAAAKNDKGETAAAPAPEAGDETKRKDLV 350
Score = 43 (20.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 17/63 (26%), Positives = 26/63 (41%)
Query: 333 VHGFSWGNV----QGVKQGIATEIFGSQTNNLQELVNGVREDFRINHYQSQKPMQMQIDF 388
+HG++ N G G A + Q+LV +I H+ +Q MQM +D
Sbjct: 8 IHGYANANATAGNNGFMCGYAASCSPVEFQQQQQLVGS-----QIEHHLNQISMQMGMDD 62
Query: 389 SGA 391
A
Sbjct: 63 ESA 65
>UNIPROTKB|Q6ZGS3 [details] [associations]
symbol:OJ1148_D05.9 "Putative basic-helix-loop-helix
transcription factor" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000139 eggNOG:NOG262411 EMBL:AP004118
EnsemblPlants:LOC_Os02g46560.1 OMA:KRELATY Uniprot:Q6ZGS3
Length = 373
Score = 117 (46.2 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 21/63 (33%), Positives = 42/63 (66%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+ H+ ER RR ++N+ LR+++P + + D+AS++G AI ++ EL+ +L+ +EA++
Sbjct: 90 MTHIAVERNRRRQMNEYLAILRSLMPEPYVQRGDQASIVGGAIEFVKELEQQLQSLEAQK 149
Query: 501 ENL 503
L
Sbjct: 150 RTL 152
Score = 68 (29.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 23/100 (23%), Positives = 47/100 (47%)
Query: 507 SRDLSAFESNPN-----VESQNRA--PDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKD 559
S SA S+P ++S++R+ D+++ VRV P ++I +
Sbjct: 233 SASASASSSSPATVAAALQSEHRSGLADIEVSLVETHASVRVMSPRRPGQLLKMIAGLQA 292
Query: 560 AQITVVESKLSTGNDMVFHTFVIK-SQGSEQLTKEKLIAA 598
++TV+ ++T + +V +T +K +G T + + AA
Sbjct: 293 LRLTVLHLNVTTLDSLVLYTLSVKVEEGCSLTTVDDIAAA 332
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 32/109 (29%), Positives = 54/109 (49%)
Query: 389 SGATSRPNVIARPLNADS-EHSDVEASCRDERTGTVEEXXXXXXXXXXXXXXEEPLNHVE 447
S S+ + N D + + EA+ DE EE H
Sbjct: 232 SSVVSKSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNL 291
Query: 448 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
+ER+RR+++N+R AL+ ++P +K DKAS+L +AI Y+ LQ ++++M
Sbjct: 292 SERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 140 (54.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 34/99 (34%), Positives = 56/99 (56%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
+ L H+ +ER+RREKLN F AL+AV+P SK DKAS+L A +I L++KL +E +
Sbjct: 180 DNQLQHMISERKRREKLNDSFVALKAVLPTGSKKDKASILIRAREHIKSLESKLSELEEK 239
Query: 500 RENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVV 538
L L++ + N + + A + + +++V
Sbjct: 240 NRELEAR---LASRPAAKNDKGETAAAEAGDETKREDLV 275
>UNIPROTKB|Q69MD0 [details] [associations]
symbol:OSJNBb0019B14.23 "BHLH-like protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005755
ProteinModelPortal:Q69MD0 EnsemblPlants:LOC_Os09g28900.1
Gramene:Q69MD0 OMA:EMLGAEC Uniprot:Q69MD0
Length = 215
Score = 132 (51.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 23/49 (46%), Positives = 38/49 (77%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAK 492
+H EAER+RRE++N LR +VP+ S+MDKA+LLG+ + Y+ +L+++
Sbjct: 31 SHSEAERKRRERINAHLDTLRGLVPSASRMDKAALLGEVVRYVRKLRSE 79
>UNIPROTKB|Q58GE3 [details] [associations]
symbol:UDT1 "Undeveloped tapetum 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0048656 "tapetal layer formation" evidence=IMP] [GO:0048658
"tapetal layer development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048656 EMBL:AY953870
STRING:Q58GE3 KEGG:dosa:Os07t0549600-01 Gramene:Q58GE3
HOGENOM:HOG000084429 Uniprot:Q58GE3
Length = 234
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
++EAER+RR +LN +ALRAVVP I+KM K + L DAI +I LQ + V+E +R+
Sbjct: 66 NLEAERRRRGRLNGNIFALRAVVPKITKMSKEATLSDAIEHIKNLQNE--VLELQRQ 120
>UNIPROTKB|Q7F7Z2 [details] [associations]
symbol:Os01g0159800 "ESTs C26093(C11622)" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 OMA:QPETISD ProtClustDB:CLSN2691085 EMBL:AP002539
RefSeq:NP_001042087.1 UniGene:Os.1443
EnsemblPlants:LOC_Os01g06640.1 EnsemblPlants:LOC_Os01g06640.2
GeneID:4324065 KEGG:osa:4324065 Uniprot:Q7F7Z2
Length = 258
Score = 134 (52.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 37/145 (25%), Positives = 72/145 (49%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H EAER+RRE++N LR ++P+ +MDKA+LL + + +L+ K + +R L
Sbjct: 69 HSEAERRRRERINAHLTTLRRMIPDTKQMDKATLLARVVDQVKDLKRKASEI-TQRTPLP 127
Query: 505 GNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHP--ASRVIQAFKDAQI 562
+ ++S E ++ A V H + ++ S D P + + AF ++
Sbjct: 128 PETNEVS-IECFTG-DAATAATTV--AGNHKTLYIKASISCDDRPDLIAGITHAFHGLRL 183
Query: 563 TVVESKLSTGNDMVFHTFVI-KSQG 586
V +++++ V H F++ + +G
Sbjct: 184 RTVRAEMTSLGGRVQHVFILCREEG 208
>TAIR|locus:2178560 [details] [associations]
symbol:bHLH071 "AT5G46690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0007275 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
EMBL:AK221613 EMBL:BT025663 EMBL:AY087479 EMBL:AF488603
IPI:IPI00543871 RefSeq:NP_568666.1 UniGene:At.29935
ProteinModelPortal:Q56XR0 SMR:Q56XR0 IntAct:Q56XR0
EnsemblPlants:AT5G46690.1 GeneID:834712 KEGG:ath:AT5G46690
TAIR:At5g46690 eggNOG:NOG262411 InParanoid:Q56XR0 OMA:THANIRI
PhylomeDB:Q56XR0 ProtClustDB:CLSN2917741 Genevestigator:Q56XR0
Uniprot:Q56XR0
Length = 327
Score = 136 (52.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 64/259 (24%), Positives = 109/259 (42%)
Query: 365 NGVREDFRINHYQSQKPMQMQIDFSGATSRPNVIARPLNADSEHSDVEASCRDERTGTVE 424
NG+ +F ++ S P + +D +I++ N SE S+ E + + T
Sbjct: 9 NGLL-NFLLSETLSPTPFKSLVDLEPLPENDVIISK--NTISEISNQEPPPQRQPPATNR 65
Query: 425 EXXXXXXXXXXXXXXEEPLN----HVEAERQRREKLNQRFYALRAVVPN--ISKMDKASL 478
EE N H+ ER RR ++NQ LR+++P K D+AS+
Sbjct: 66 GKKRRRRKPRVCKNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASI 125
Query: 479 LGDAIAYINELQAKLKVMEAERE-NLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEV 537
+G AI +I EL+ KL +EA++ N N S+ + N E +N P + +
Sbjct: 126 VGGAIDFIKELEHKLLSLEAQKHHNAKLNQSVTSSTSQDSNGEQEN--PHQPSSLSLSQF 183
Query: 538 VVRVSCPLDSH---PASRVIQAFKDAQITVVESKLST---GNDMVFHTFVIKSQGSEQLT 591
+ P + S V +D ++T++E+ + F + + QL+
Sbjct: 184 FLHSYDPSQENRNGSTSSVKTPMEDLEVTLIETHANIRILSRRRGFRWSTLATTKPPQLS 243
Query: 592 KEKLIAAFSCESSSIQPLS 610
K L+A+ S SI LS
Sbjct: 244 K--LVASLQSLSLSILHLS 260
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 131 (51.2 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 26/59 (44%), Positives = 41/59 (69%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
H E+ER+RR+++NQR L+ ++P SK DK S+L D I ++ +LQA+++ M R NL
Sbjct: 171 HNESERRRRDRINQRMRTLQKLLPTASKADKVSILDDVIEHLKQLQAQVQFMSL-RANL 228
Score = 49 (22.3 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 332 GVHGFSWGNVQGVKQGIATEIFGSQTNN--LQELVNGVREDFRINHYQS-QKPMQMQI 386
GV +W N Q G+ E+ + +NN + +NG + H + Q+P + Q+
Sbjct: 5 GVKELTWENGQLTVHGLGDEVEPTTSNNPIWTQSLNGCETLESVVHQAALQQPSKFQL 62
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 135 (52.6 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H +E++RR ++N++ AL++++PN SK DKAS+L DAI Y+ +LQ +++++ R L
Sbjct: 37 HNLSEKRRRSRINEKMKALQSLIPNSSKTDKASMLDDAIEYLKQLQLQVQMLSM-RNGLY 95
Query: 505 GNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVV 539
+LS + + + A D + A D VV
Sbjct: 96 LPPVNLSGAPEHLPIPQMSAALDQNSAKASDPSVV 130
>UNIPROTKB|Q7X8R0 [details] [associations]
symbol:OSJNBa0083N12.3 "OSJNBa0083N12.3 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008210 EMBL:CM000141 eggNOG:NOG254981 EMBL:AL606683
RefSeq:NP_001053749.1 UniGene:Os.49995
EnsemblPlants:LOC_Os04g51070.1 GeneID:4336865 KEGG:osa:4336865
OMA:RASIVGD ProtClustDB:CLSN2695079 Uniprot:Q7X8R0
Length = 464
Score = 135 (52.6 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 449 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVME--AERENLSGN 506
ER+RRE+LN +F LR + PN +K D+AS++GDAI YI+EL +K ++ E++ N
Sbjct: 270 ERERREQLNVKFRTLRMLFPNPTKNDRASIVGDAIEYIDELNRTVKELKILVEQKRHGNN 329
Query: 507 SRDLSAF--ESNPNVESQNRAPDVDIQ 531
R + E+ + ES + P D Q
Sbjct: 330 RRKVLKLDQEAAADGESSSMRPVRDDQ 356
Score = 48 (22.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 519 VESQNRAPDVDIQAAHDEVVVRVSCPLDSHP---ASRVIQAFKDAQITVVESKLSTGNDM 575
V+ +++ VD++ DEV ++++ ++ A++V+ F+ I VV + +
Sbjct: 369 VQRRSKECHVDVRIVDDEVNIKLTEKKKANSLLHAAKVLDEFQLELIHVVGGIIGDHHIF 428
Query: 576 VFHTFVIKSQGS 587
+F+T V S+GS
Sbjct: 429 MFNTKV--SEGS 438
>UNIPROTKB|Q5KQG3 [details] [associations]
symbol:OSJNBb0086G17.12 "Putative uncharacterized protein
OSJNBb0086G17.12" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238962 OMA:SHIAVER EMBL:AC144455
ProteinModelPortal:Q5KQG3 EnsemblPlants:LOC_Os05g51820.1
Gramene:Q5KQG3 Uniprot:Q5KQG3
Length = 227
Score = 116 (45.9 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKVMEAER 500
++H+ ER RR ++N LR++ P I + D+AS++G AI +I ELQ L+ +EA++
Sbjct: 1 MSHIAVERNRRRQMNDHLKVLRSLTPAFYIKRGDQASIIGGAIDFIKELQTLLQSLEAQK 60
Query: 501 E 501
+
Sbjct: 61 K 61
Score = 55 (24.4 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 525 APDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIK 583
+P D++A V + P R+I + + V+ ++T +D V ++FV+K
Sbjct: 135 SPMADVEARISGANVLLRTLSRRAPPVRIIALLESLHLEVLHLNITTMDDTVLYSFVLK 193
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 141 (54.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I Y+ +LQA++ +M
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
Score = 37 (18.1 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 105 EATRIPNIRLEDE 117
+ATR+PN + DE
Sbjct: 77 QATRLPNPKPTDE 89
>UNIPROTKB|Q6ZJC8 [details] [associations]
symbol:OJ1666_A04.16 "Os08g0477900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003917 RefSeq:NP_001062047.1 UniGene:Os.73988
EnsemblPlants:LOC_Os08g37290.1 GeneID:4345836 KEGG:osa:4345836
OMA:LLNRDEH ProtClustDB:CLSN2697408 Uniprot:Q6ZJC8
Length = 223
Score = 129 (50.5 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 22/49 (44%), Positives = 37/49 (75%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAK 492
+H EAER+RR+++N LR +VP+ S+MDKA+LLG+ + ++ EL+ +
Sbjct: 22 SHSEAERKRRQRINAHLATLRTLVPSASRMDKAALLGEVVRHVRELRCR 70
>TAIR|locus:2040287 [details] [associations]
symbol:BHLH100 "basic helix-loop-helix protein 100"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010106 "cellular response to iron
ion starvation" evidence=IEP] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:0055072 "iron ion homeostasis"
evidence=IGI] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0009414
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005662 GO:GO:0055072 HSSP:P61244 EMBL:AY074635 EMBL:AF488626
IPI:IPI00522524 IPI:IPI00548751 PIR:E84839 RefSeq:NP_181657.1
RefSeq:NP_850349.1 UniGene:At.37027 ProteinModelPortal:Q9ZVB5
SMR:Q9ZVB5 EnsemblPlants:AT2G41240.1 GeneID:818723
KEGG:ath:AT2G41240 TAIR:At2g41240 eggNOG:NOG256140
HOGENOM:HOG000238662 InParanoid:Q9ZVB5 OMA:HNASERE PhylomeDB:Q9ZVB5
ProtClustDB:CLSN2683761 Genevestigator:Q9ZVB5 Uniprot:Q9ZVB5
Length = 242
Score = 130 (50.8 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 45/165 (27%), Positives = 86/165 (52%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASL---LGDAIAYINELQAKLKVMEAE 499
LNH +ER+RR+K+N F +LR+ +P ++ K S+ + A+ YI ELQ ++K + +
Sbjct: 64 LNHNASERERRKKINTMFSSLRSCLPPTNQTKKLSVSATVSQALKYIPELQEQVKKLMKK 123
Query: 500 RENLS---GNSRDLSAFESNPNVES--QNRAPDVD-IQAAHDEVVVRVSCPLDSHPAS-- 551
+E LS RDL + N E + A V + + EV+V++S L + S
Sbjct: 124 KEELSFQISGQRDLVYTDQNSKSEEGVTSYASTVSSTRLSETEVMVQISS-LQTEKCSFG 182
Query: 552 RVIQAFKDAQITVVESKLSTGN-DMVFHTFVIKSQGSEQLTKEKL 595
V+ ++ + +V + S + + +F++ ++ + Q+ E+L
Sbjct: 183 NVLSGVEEDGLVLVGASSSRSHGERLFYSMHLQIKNG-QVNSEEL 226
>TAIR|locus:2065086 [details] [associations]
symbol:AT2G40200 "AT2G40200" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AF085279 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AF488586 EMBL:BT029997 EMBL:BT030051
IPI:IPI00547467 PIR:E84826 RefSeq:NP_181549.1 UniGene:At.37090
ProteinModelPortal:Q9XEF0 SMR:Q9XEF0 EnsemblPlants:AT2G40200.1
GeneID:818611 KEGG:ath:AT2G40200 TAIR:At2g40200 eggNOG:NOG318931
HOGENOM:HOG000095217 InParanoid:Q9XEF0 OMA:QPETISD PhylomeDB:Q9XEF0
ProtClustDB:CLSN2913057 ArrayExpress:Q9XEF0 Genevestigator:Q9XEF0
Uniprot:Q9XEF0
Length = 254
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 50/181 (27%), Positives = 87/181 (48%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
+H AE++RR+++N ALR +VPN K+DKA+LL I + EL+ K AE
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKA----AE---- 117
Query: 504 SGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVS-CPLDSHPA-SRVIQAFKDAQ 561
S +DL V+ + + D ++ + ++ + S C D A S +I+ Q
Sbjct: 118 SPIFQDLPTEADEVTVQPETIS---DFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQ 174
Query: 562 ITVVESKL-STGNDMVFHTFVIKSQGSEQLT---------KEKLIAAFSCESSSIQPLSS 611
+ +++++ S G M + F++K + T K+ L +A + +SS SS
Sbjct: 175 LETIQAEIISVGGRMRIN-FILKDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSS 233
Query: 612 V 612
V
Sbjct: 234 V 234
>UNIPROTKB|Q6ESL3 [details] [associations]
symbol:OJ1294_G06.8 "DNA binding protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005093 ProteinModelPortal:Q6ESL3
EnsemblPlants:LOC_Os09g24490.1 KEGG:dosa:Os09t0410700-00
Gramene:Q6ESL3 OMA:RRHECIA Uniprot:Q6ESL3
Length = 363
Score = 132 (51.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 42/158 (26%), Positives = 77/158 (48%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE-- 501
+H EAER+RR+++N LR+++PN +K DKASLL + I ++ EL+ + + A
Sbjct: 109 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTTAIAAAAAAG 168
Query: 502 NLSGNSRDLS-AFESNPNVESQNRAP----DVDIQAAHD---EVVVRVSCPLDSHP--AS 551
+ GN D A + +Q P ++ + AA D ++VVR S + P
Sbjct: 169 DYHGNDEDDDDAVVGRRSAAAQQLLPTEADELAVDAAVDAEGKLVVRASLCCEDRPDLIP 228
Query: 552 RVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQ 589
+ +A ++ ++++T V +I + +Q
Sbjct: 229 DIARALAALRLRARRAEITTLGGRVRSVLLITADEQQQ 266
Score = 43 (20.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 384 MQIDFSGATSRPNVIARPLNADSEHSDVEASCRDERTG 421
+Q + T+R + A+ L A HS+ E R G
Sbjct: 86 LQAELGRVTAREIMDAKALAASRSHSEAERRRRQRING 123
>TAIR|locus:2012393 [details] [associations]
symbol:AT1G68810 "AT1G68810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC011914 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AY072161 EMBL:AY122983
IPI:IPI00517468 PIR:H96712 RefSeq:NP_564944.1 UniGene:At.46879
HSSP:P22415 ProteinModelPortal:Q9S7Y1 SMR:Q9S7Y1
EnsemblPlants:AT1G68810.1 GeneID:843213 KEGG:ath:AT1G68810
TAIR:At1g68810 eggNOG:NOG328059 HOGENOM:HOG000243133
InParanoid:Q9S7Y1 OMA:FVIKASL PhylomeDB:Q9S7Y1
ProtClustDB:CLSN2689090 Genevestigator:Q9S7Y1 Uniprot:Q9S7Y1
Length = 368
Score = 132 (51.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
+H EAER+RRE++N LR+++PN +K DKASLL + I ++ EL+ + V+ +E +
Sbjct: 177 SHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVI-SETNLV 235
Query: 504 SGNSRDLS-AF 513
S +L+ AF
Sbjct: 236 PTESDELTVAF 246
>TAIR|locus:504956068 [details] [associations]
symbol:AT2G31215 "AT2G31215" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002685 GO:GO:0003700 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00519006 RefSeq:NP_850161.1 UniGene:At.52991
ProteinModelPortal:F4IQQ9 SMR:F4IQQ9 EnsemblPlants:AT2G31215.1
GeneID:817678 KEGG:ath:AT2G31215 PhylomeDB:F4IQQ9 Uniprot:F4IQQ9
Length = 129
Score = 110 (43.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 449 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQ---AKLKVMEAERENLSG 505
ER+RR N RF+ L+ ++PN +K +AS++ D I YINELQ ++LK + E++
Sbjct: 28 ERERRALFNDRFFDLKNLIPNPTKGGEASIVQDGIVYINELQRLVSELKYL-VEKKKCGA 86
Query: 506 NSRDLSAFESN 516
++ N
Sbjct: 87 RHNNIEVDNKN 97
>UNIPROTKB|Q8H8H9 [details] [associations]
symbol:OJ1126B12.2 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000009 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC098695
EnsemblPlants:LOC_Os03g03000.1 KEGG:dosa:Os03t0122100-00
OMA:GAIDYVK Uniprot:Q8H8H9
Length = 291
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 43/157 (27%), Positives = 79/157 (50%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+ H+ ER RR +N +LR+++P+ I + D+A+++G AI Y+ +L+ +L ++A
Sbjct: 117 MTHIAVERNRRRLMNDHLASLRSLIPSNYIPRGDQATVVGGAIDYVKQLEQQLVALQAAA 176
Query: 501 ENLSGNSRDLSAFES-------NPNVESQNRA---PDVDIQAAH---DEVVVRVSCPLDS 547
SG +A + +P S + A VD++A V VRV+ +
Sbjct: 177 AERSGVGVVAAAATAASDGVFVSPQYTSYSEARGGSGVDVEATAAVGGHVRVRVAGRRWT 236
Query: 548 HPASRVIQAFKDAQITVVESKL-STGNDMVFHTFVIK 583
R + A +D ++TV+ + S G+D V + F +K
Sbjct: 237 GRLVRAVAAMEDLRLTVLHLAVTSVGHDAVVYCFNLK 273
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 131 (51.2 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 38/143 (26%), Positives = 70/143 (48%)
Query: 390 GATSRPNVIARPLNADSEHSDVEASCRDERTG--TVEEXXXXXXXXXXXXXXEEPLN--- 444
G +S V + + A +D E C E G V+E +
Sbjct: 143 GNSSGTRVSSSSVGASGNETD-EYDCESEEGGEAVVDEAPSSKSGPSSRSSSKRCRAAEV 201
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H +E++RR ++N++ AL++++PN +K DKAS+L +AI Y+ +LQ +++++ R ++
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLTM-RNGIN 260
Query: 505 GNSRDLSAFESNPNVESQNRAPD 527
+ L +P SQ R P+
Sbjct: 261 LHPLCLPGTTLHPLQLSQIRPPE 283
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 133 (51.9 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 27/107 (25%), Positives = 58/107 (54%)
Query: 390 GATSRPNVIARPLNADSEHSDVEASCRDERTGTVEEXXXXXXXXXXXXXXEEPLNHVEAE 449
G + P++ + +++ + D + +E +G + H +E
Sbjct: 293 GPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKEAGPSRTGLGSKRSRSAEVHNLSE 352
Query: 450 RQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
R+RR+++N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ ++++M
Sbjct: 353 RRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>UNIPROTKB|Q6ETQ5 [details] [associations]
symbol:P0613F08.25 "Basic helix-loop-helix-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP004801 ProteinModelPortal:Q6ETQ5
EnsemblPlants:LOC_Os02g15760.1 Gramene:Q6ETQ5 OMA:FRILETW
Uniprot:Q6ETQ5
Length = 415
Score = 116 (45.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 21/60 (35%), Positives = 41/60 (68%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAIAYINELQAKLKVMEAER 500
++H+ ER RR+++N+ LR+++P + + D+AS++G + YI ELQ L+ +EA++
Sbjct: 132 MSHITVERNRRKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLRSLEAKK 191
Score = 60 (26.2 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 526 PDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQ 585
PDV ++ A +V++ A ++I A + + ++ + T +D +F IK
Sbjct: 337 PDVRVEFAGPNLVLKTVSHRAPGQALKIIAALESLSLEILHVSICTVDDATVLSFTIKI- 395
Query: 586 GSE-QLTKEKLI 596
G E +L+ E+L+
Sbjct: 396 GIECELSAEELV 407
>TAIR|locus:2135169 [details] [associations]
symbol:bHLH11 "AT4G36060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161588
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022373 EMBL:AF251696
EMBL:AY090362 EMBL:BT000535 IPI:IPI00517622 IPI:IPI00521706
PIR:T05498 RefSeq:NP_195330.2 RefSeq:NP_849566.1 UniGene:At.43990
ProteinModelPortal:Q8W2F2 SMR:Q8W2F2 IntAct:Q8W2F2 PRIDE:Q8W2F2
EnsemblPlants:AT4G36060.1 GeneID:829762 KEGG:ath:AT4G36060
TAIR:At4g36060 eggNOG:NOG307055 HOGENOM:HOG000005852 OMA:PYSASVN
PhylomeDB:Q8W2F2 ProtClustDB:CLSN2690363 Genevestigator:Q8W2F2
Uniprot:Q8W2F2
Length = 286
Score = 128 (50.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 447 EAERQRREKLNQRFYAL-RAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSG 505
E E+ RR+KL ++F L A+ PN K DKAS+L D I + ++ ++ ++AE E LS
Sbjct: 51 EREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQ 110
Query: 506 NSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSH 548
SR+L +S E D++I A + ++ P H
Sbjct: 111 ESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWVPH 153
>TAIR|locus:2042551 [details] [associations]
symbol:CPUORF7 "conserved peptide upstream open reading
frame 7" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005739 "mitochondrion" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002685 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0048364 EMBL:AC006593
SUPFAM:SSF47459 InterPro:IPR025610 Pfam:PF14215 EMBL:AJ576042
EMBL:AY129831 EMBL:AY231425 EMBL:AY954808 EMBL:AK221935
IPI:IPI00523241 IPI:IPI00543072 IPI:IPI00657578 PIR:G84718
RefSeq:NP_001031453.1 RefSeq:NP_001031454.1 RefSeq:NP_180686.2
UniGene:At.43376 PRIDE:Q58G01 EnsemblPlants:AT2G31280.1
GeneID:817685 KEGG:ath:AT2G31280 TAIR:At2g31280
HOGENOM:HOG000137502 InParanoid:Q58G01 OMA:AGSELHE PhylomeDB:Q58G01
ProtClustDB:CLSN2679947 Genevestigator:Q58G01 Uniprot:Q58G01
Length = 720
Score = 103 (41.3 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 59/243 (24%), Positives = 98/243 (40%)
Query: 140 DNYALGLDRVTDTEMFFLASM-YFSFPRGEGGPGKCFASGKHVWLL--DALKLSSDYCVR 196
D++ + D +A M Y + GEG G+ SG+H W+ + +S +
Sbjct: 43 DHHGTNMHGAHDPLGLAVAKMSYHVYSLGEGIVGQVAVSGEHQWVFPENYNNCNSAFEFH 102
Query: 197 SFLAK--SARIQTIVLISTD-AGVVELGSVRSVPESLELVHSIRATFSSNSSLATVKPMA 253
+ SA I+TI++++ GVV+LGS+ V E + V+ IR F LA P+A
Sbjct: 103 NVWESQISAGIKTILVVAVGPCGVVQLGSLCKVNEDVNFVNHIRHLF-----LALRDPLA 157
Query: 254 VALPVTSEKKDENGL----FPNLGILDRVEGVPKIFGQELNNSGHVHTPFSREKLAVRKM 309
+ N L P+ G+ E P G E++ + V + R+
Sbjct: 158 DHAANLRQCNMNNSLCLPKMPSEGL--HAEAFPDCSG-EVDKAMDVEESNILTQYKTRRS 214
Query: 310 EERP---SWEAYTNGNRTAFPGIRNGVHGFSWGNVQGVKQGIATEIFGSQTNNLQELVNG 366
+ P G R V G + G+ GV G ++ G++ N Q N
Sbjct: 215 DSMPYNTPSSCLVMEKAAQVVGGREVVQGSTCGSYSGVTFGFPVDLVGAKHEN-QVGTNI 273
Query: 367 VRE 369
+R+
Sbjct: 274 IRD 276
Score = 65 (27.9 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 31/159 (19%), Positives = 62/159 (38%)
Query: 447 EAERQR---REKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVME----AE 499
E+ R R R+ + R LR +VPN SK SLL I ++ LQ K E +
Sbjct: 548 ESSRPRPRDRQLIQDRIKELRELVPNGSKCSIDSLLERTIKHMLFLQNVTKHAEKLSKSA 607
Query: 500 RENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDE--VVVRVSCPLDSHPASRVIQAF 557
E + + V + + ++ + + V++ + C H +
Sbjct: 608 NEKMQQKETGMQGSSCAVEVGGHLQVSSIIVENLNKQGMVLIEMLCEECGH-FLEIANVI 666
Query: 558 KDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLI 596
+ + ++ T + + FV +SQ S+ + + ++
Sbjct: 667 RSLDLVILRGFTETQGEKTWICFVTESQNSKVMQRMDIL 705
Score = 59 (25.8 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 27/130 (20%), Positives = 51/130 (39%)
Query: 386 IDFSGATSRPNVIARPLNADSEHSDVEASCRDERTGTVEEXXXXXXXXXXXXXXEEPLNH 445
+D GA N + + D+ H + + C+D R ++
Sbjct: 258 VDLVGA-KHENQVGTNIIRDAPHVGMTSGCKDSRD--LDPNLHLYMKNHVLNDTSTSALA 314
Query: 446 VEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSG 505
+EAER +Q + L + S+ DK S + + ++E Q + E ER + G
Sbjct: 315 IEAERLIT---SQSYPRLDSTFQATSRTDKESSYHNEVFQLSENQGNKYIKETER--MLG 369
Query: 506 NSRDLSAFES 515
+ + S F++
Sbjct: 370 RNCESSQFDA 379
Score = 56 (24.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 67 NFSWNYAIFWQISRSKS 83
N W+YA+FWQ++ S
Sbjct: 15 NTDWDYAVFWQLNHRGS 31
>TAIR|locus:2044387 [details] [associations]
symbol:AT2G46810 "AT2G46810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005310 HOGENOM:HOG000238962 ProtClustDB:CLSN2683564
EMBL:AF488602 IPI:IPI00528766 PIR:T02682 RefSeq:NP_182204.1
UniGene:At.36451 ProteinModelPortal:O81037 SMR:O81037
EnsemblPlants:AT2G46810.1 GeneID:819294 KEGG:ath:AT2G46810
TAIR:At2g46810 eggNOG:NOG256546 InParanoid:O81037 OMA:KPWELEN
PhylomeDB:O81037 Genevestigator:O81037 Uniprot:O81037
Length = 371
Score = 129 (50.5 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 42/172 (24%), Positives = 84/172 (48%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKVMEAE- 499
+ H+ ER RR ++N +LR+++P+ I + D+AS++G AI ++ L+ +L+ +EA+
Sbjct: 193 MTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKILEQQLQSLEAQK 252
Query: 500 RENLSGNSRD-------LSAFESNP----NVESQNRAPDVDIQAAHDEVVVRVSCPLDSH 548
R S ++++ L SN N E Q+ ++ V +++ C
Sbjct: 253 RSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKIEATVIESHVNLKIQCTRKQG 312
Query: 549 PASRVIQAFKDAQITVVESKL-STGNDMVFHTFVIKSQGSEQL-TKEKLIAA 598
R I + + TV+ + S N V ++F +K + L + +++ AA
Sbjct: 313 QLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDECNLGSADEITAA 364
>UNIPROTKB|Q941Z7 [details] [associations]
symbol:P0431G06.13-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634
GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000138
OMA:HNASERE EMBL:AP003683 STRING:Q941Z7
EnsemblPlants:LOC_Os01g72370.1 EnsemblPlants:LOC_Os01g72370.2
Uniprot:Q941Z7
Length = 248
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 47/170 (27%), Positives = 86/170 (50%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASL---LGDAIAYINELQAKLKVMEAE 499
L+H ER RR++LN+ + +LRA++P+ K S+ + + YI ELQ +++ +E +
Sbjct: 71 LSHNAYERDRRKQLNELYSSLRALLPDADHTKKLSIPTTVSRVLKYIPELQKQVENLERK 130
Query: 500 RENLSGNSR-DLSAFESNPNVESQNRAPDVDIQAAHD-EVVVRVSCPLDSH----PASRV 553
++ L+ S + + S+ AP V +D E++V+VS + P S+
Sbjct: 131 KKELTTTSTTNCKPGVLGSQLMSEGMAPIVSATCINDMEIMVQVSLLSNVAGSVLPLSKC 190
Query: 554 IQAFKDAQITVVESKLSTG-NDMVFHTFVIKSQGSEQLTKEKLIAAFSCE 602
I+ ++ + + S S+G + F++ I Q SE E+ AF CE
Sbjct: 191 IKVLENEGLHFISSSTSSGFGNRTFYS--IHLQRSEGTINEEC-PAF-CE 236
>TAIR|locus:2080600 [details] [associations]
symbol:bHLH38 "basic helix-loop-helix 38" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010106 "cellular response to iron ion
starvation" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0055072 "iron ion homeostasis" evidence=IGI]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL138655 GO:GO:0055072
HSSP:P22415 HOGENOM:HOG000238662 ProtClustDB:CLSN2683761
EMBL:AF488576 EMBL:AK221542 EMBL:BT026419 IPI:IPI00516990
PIR:T47757 RefSeq:NP_191256.1 UniGene:At.34879
ProteinModelPortal:Q9M1K1 SMR:Q9M1K1 IntAct:Q9M1K1 STRING:Q9M1K1
DNASU:824864 EnsemblPlants:AT3G56970.1 GeneID:824864
KEGG:ath:AT3G56970 TAIR:At3g56970 eggNOG:NOG290862
InParanoid:Q9M1K1 OMA:KINCEEL PhylomeDB:Q9M1K1
Genevestigator:Q9M1K1 Uniprot:Q9M1K1
Length = 253
Score = 120 (47.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 48/180 (26%), Positives = 88/180 (48%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASL---LGDAIAYINELQAKLKVMEAE 499
LNH +ER RR+K+N F +LR+ +P + K S+ + ++ YI ELQ ++K + +
Sbjct: 74 LNHNASERDRRKKINTLFSSLRSCLPASDQSKKLSIPETVSKSLKYIPELQQQVKRLIQK 133
Query: 500 RENL----SGNSRDLSAFESN-PNVESQNRAPDVDIQAAHDEVVVRVSCP-LDSHPASRV 553
+E + SG RD ++ P + + + +EV+V+VS + + S V
Sbjct: 134 KEEILVRVSGQ-RDFELYDKQQPKAVASYLSTVSATRLGDNEVMVQVSSSKIHNFSISNV 192
Query: 554 IQAFK-DAQITV-VESKLSTGNDMVFHTFVIKSQGS-------EQLTKEKLIAAFSCESS 604
+ + D + V V S S G + +F+T ++ + E+L++ L CE+S
Sbjct: 193 LGGIEEDGFVLVDVSSSRSQG-ERLFYTLHLQVENMDDYKINCEELSERMLYLYEKCENS 251
Score = 45 (20.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 354 GSQTNNLQELVNGVREDFRINHYQSQKPMQMQIDFSGATSRPNVIARPLNADSEHSD 410
G NN L V + + + H+Q+ + + + + + P V+ + LN ++ D
Sbjct: 27 GDNLNNGTFLELTVPQTYEVTHHQNSLGVSVSSEGNEIDNNP-VVVKKLNHNASERD 82
>UNIPROTKB|Q6K4B1 [details] [associations]
symbol:OJ1595_D08.4 "Os09g0468700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 eggNOG:NOG281753 EMBL:AP005399
EMBL:AP005574 RefSeq:NP_001175879.1 UniGene:Os.98668
EnsemblPlants:LOC_Os09g29360.1 GeneID:9267272 KEGG:osa:9267272
Uniprot:Q6K4B1
Length = 351
Score = 108 (43.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/72 (30%), Positives = 44/72 (61%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+ H+ ER RR+++N+ LR+++P + D+AS++G AI ++ EL+ L+ +EA +
Sbjct: 134 MTHIAVERNRRKQMNEYLAVLRSLMPPSYAQRGDQASIVGGAINFVKELEQLLQSLEARK 193
Query: 501 ENLSGNSRDLSA 512
+ + D +A
Sbjct: 194 SSRQCAAHDAAA 205
Score = 64 (27.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 514 ESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGN 573
E+ + + DV++ +RV R++ A + ++TV+ +++
Sbjct: 249 EAEASGSKPSAVADVEVTMVESHANLRVLSRRRPRQLLRLVVALQGHRLTVLHLNMTSAG 308
Query: 574 DMVFHTFVIKSQGSEQLTKEKLIA 597
MV ++F +K + QLT IA
Sbjct: 309 HMVLYSFSLKVEDDCQLTSVDEIA 332
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 119 (46.9 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +ER+RR+++N++ AL+ ++PN +K DK S+L +AI Y+ LQ +L+++
Sbjct: 18 HNFSERRRRDRINEKLKALQELLPNCTKTDKVSMLDEAIDYLKSLQLQLQML 69
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 40/111 (36%), Positives = 63/111 (56%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKL-KVMEAERE 501
L H+ +ER+RREKLN+ F ALR+++P +K DKAS+L A ++ LQ ++ K++E RE
Sbjct: 288 LQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNRE 347
Query: 502 ---NLSGN---SRDLSAFES-NPNV----ESQNRAPDVDIQAAHDEVVVRV 541
L+G DL E N + ES +R +D++ ++RV
Sbjct: 348 VEAKLAGEREIENDLRPEERFNVRIRHIPESTSRERTLDLRVVLRGDIIRV 398
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 120 (47.3 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 22/46 (47%), Positives = 36/46 (78%)
Query: 451 QRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
+RR+++NQ+ L+ +VPN SK DKAS+L + I Y+ +LQA+++VM
Sbjct: 12 KRRDRINQKMKTLQKLVPNSSKTDKASMLDEVIDYLKQLQAQVQVM 57
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 129 (50.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +ER+RR+++N+R AL+ ++P+ S+ DKAS+L +AI Y+ LQ +L+VM
Sbjct: 261 HNLSERRRRDRINERMKALQELIPHCSRTDKASILDEAIDYLKSLQMQLQVM 312
Score = 44 (20.5 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 103 ESEATRIPNIRLEDETQQRMRK 124
+S+A R P+++++ Q+ +RK
Sbjct: 42 QSQARREPSVQVQTHKQETLRK 63
Score = 42 (19.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 87 VLGWGDGSCREPKEGEESEATRIPNIRLEDETQQRMRKRVLQKLHTLFGGSDEDNY 142
V+ G C + +AT +P + + D + K V ++L T GGS +Y
Sbjct: 147 VITVGPSHCGSNQSTNIHQATTLP-VSMSDRS-----KNVEERLDTSSGGSSGCSY 196
>TAIR|locus:2116977 [details] [associations]
symbol:AT4G01460 "AT4G01460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488590 EMBL:AF096370 EMBL:AL161492 EMBL:AY099780
EMBL:AY128881 IPI:IPI00528581 PIR:A85019 PIR:T01948
RefSeq:NP_192055.1 UniGene:At.34425 ProteinModelPortal:Q9M128
SMR:Q9M128 EnsemblPlants:AT4G01460.1 GeneID:828089
KEGG:ath:AT4G01460 TAIR:At4g01460 eggNOG:NOG293017
HOGENOM:HOG000238962 InParanoid:Q9M128 OMA:QINGEVM PhylomeDB:Q9M128
ProtClustDB:CLSN2685500 Genevestigator:Q9M128 Uniprot:Q9M128
Length = 315
Score = 114 (45.2 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 22/60 (36%), Positives = 41/60 (68%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+ H+ ER RR ++N+ +LR+++P + + D+AS++G AI +I EL+ L+ +EAE+
Sbjct: 115 MTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELEQLLQSLEAEK 174
Score = 55 (24.4 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 13/71 (18%), Positives = 33/71 (46%)
Query: 527 DVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQG 586
+V+ + V ++V C + I + ++ ++ ++ +S+ D V ++F +K +
Sbjct: 223 EVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIYSFNLKMED 282
Query: 587 SEQLTKEKLIA 597
+L IA
Sbjct: 283 GCKLGSADEIA 293
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 121 (47.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +E++RR K+N++ AL+ ++PN +K DKAS+L +AI Y+ +LQ +++ +
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H AER RRE++ +R +L+ +VPN +K DKAS+L + I Y+ LQ ++KV+ R +
Sbjct: 110 HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFLQLQVKVLSMSRLGGA 169
Query: 505 GN 506
G+
Sbjct: 170 GS 171
>TAIR|locus:2082400 [details] [associations]
symbol:MUTE "AT3G06120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010374
"stomatal complex development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005739
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238962 EMBL:AC018907 GO:GO:0010374 EMBL:AF488580
EMBL:DQ863645 EMBL:DQ864972 EMBL:DQ446639 EMBL:DQ653068
IPI:IPI00548354 RefSeq:NP_187263.1 UniGene:At.40565
ProteinModelPortal:Q9M8K6 SMR:Q9M8K6 STRING:Q9M8K6
EnsemblPlants:AT3G06120.1 GeneID:819785 KEGG:ath:AT3G06120
TAIR:At3g06120 eggNOG:NOG271176 InParanoid:Q9M8K6 OMA:SHIAVER
PhylomeDB:Q9M8K6 ProtClustDB:CLSN2684638 Genevestigator:Q9M8K6
Uniprot:Q9M8K6
Length = 202
Score = 114 (45.2 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAIAYINELQAKLKVMEAER 500
++H+ ER RR ++N+ +LR++ P I + D+AS++G I +I ELQ ++V+E+++
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 501 ENLSGN 506
+ N
Sbjct: 61 RRKTLN 66
Score = 44 (20.5 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 17/70 (24%), Positives = 33/70 (47%)
Query: 527 DVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQG 586
+V+ + + VV+RV ++I + V+ +S+ + V + FV+K G
Sbjct: 116 NVEAKISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKI-G 174
Query: 587 SE-QLTKEKL 595
E L+ E+L
Sbjct: 175 LECHLSLEEL 184
>TAIR|locus:2042556 [details] [associations]
symbol:AT2G31210 "AT2G31210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC006593 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG254981 HOGENOM:HOG000083787
ProtClustDB:CLSN2716481 EMBL:AJ519809 EMBL:AK118441 EMBL:BT009675
IPI:IPI00540344 PIR:H84717 RefSeq:NP_180679.2 UniGene:At.38250
ProteinModelPortal:Q8GX46 SMR:Q8GX46 EnsemblPlants:AT2G31210.1
GeneID:817677 KEGG:ath:AT2G31210 TAIR:At2g31210 InParanoid:Q8GX46
OMA:ERERRCH PhylomeDB:Q8GX46 Genevestigator:Q8GX46 Uniprot:Q8GX46
Length = 428
Score = 132 (51.5 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 30/85 (35%), Positives = 51/85 (60%)
Query: 449 ERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVME--AERENLSGN 506
ER+RR LN+R+ AL+ ++P+ SK D+AS+L D I YINEL+ ++ ++ ER+ G
Sbjct: 219 ERERRCHLNERYEALKLLIPSPSKGDRASILQDGIDYINELRRRVSELKYLVERKRCGGR 278
Query: 507 SR--DLSAFESNPNVESQNRAPDVD 529
+ ++ +N N++ D D
Sbjct: 279 HKNNEVDDNNNNKNLDDHGNEDDDD 303
Score = 38 (18.4 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 133 LFGGSDEDNYALGLDRVTDTE 153
L +D Y LG+D T T+
Sbjct: 157 LIPSNDYSGYLLGIDTNTTTQ 177
>UNIPROTKB|Q75IR0 [details] [associations]
symbol:OSJNBb0099P06.13 "Putative uncharacterized protein
OSJNBb0099P06.13" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR002912
InterPro:IPR011598 Pfam:PF00010 Pfam:PF01842 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0016597 GO:GO:0008152
EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC124144
EMBL:AC134341 EMBL:AK110619 RefSeq:NP_001054739.1 UniGene:Os.56950
EnsemblPlants:LOC_Os05g07120.1 EnsemblPlants:LOC_Os05g07120.2
GeneID:4337905 KEGG:osa:4337905 eggNOG:NOG309133
HOGENOM:HOG000241234 OMA:VSCDDRP ProtClustDB:CLSN2691085
Uniprot:Q75IR0
Length = 271
Score = 123 (48.4 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 41/147 (27%), Positives = 66/147 (44%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H EAER+RRE++N LR ++P+ +MDKA+LL + + L K + EA + +
Sbjct: 70 HSEAERRRRERINAHLATLRRILPDAKQMDKATLLASVVNQVKHL--KTRATEATTPSTA 127
Query: 505 GNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPA--SRVIQAFKDAQI 562
E+N V Q A AA V VSC D P + + F+ ++
Sbjct: 128 ATIPP----EAN-EVTVQCYAGGEHTAAARTYVRATVSC--DDRPGLLADIAATFRRLRL 180
Query: 563 TVVESKLSTGNDMVFHTFVIKSQGSEQ 589
+ + +S H FV+ + E+
Sbjct: 181 RPLSADMSCLGGRTRHAFVLCREEEEE 207
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 132 (51.5 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 38/108 (35%), Positives = 60/108 (55%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H AER RREK+++R L+ +VPN +K DKAS+L + I Y+ LQ ++KV+ R
Sbjct: 250 HSIAERLRREKISERMKNLQVLVPNSNKADKASMLDEIIDYVKFLQLQVKVLSMSRLGAP 309
Query: 505 GNSRDL---SAFE--SNPNVESQNRA------PDVDIQAAHDEVVVRV 541
G L S E SNP++ + + PD + +A ++ VV++
Sbjct: 310 GAVLPLLRESQTECHSNPSLSASTISQGPPDMPDSEDSSAFEQEVVKL 357
Score = 37 (18.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 9/51 (17%), Positives = 19/51 (37%)
Query: 3 IEFNMGGNLWNDEDKAMGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQ 53
++++ G +W + + + Y S+ M GSD L+
Sbjct: 1 MDYSAGSYMWPGNSGSENYNFVDGSSESYAEEGSLPPSGYFMGAGSDRSLK 51
>TAIR|locus:2085964 [details] [associations]
symbol:BHLH32 "AT3G25710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0016036 "cellular response to phosphate
starvation" evidence=IMP] [GO:0080147 "root hair cell development"
evidence=IMP] [GO:0048364 "root development" evidence=IEP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AB028607
GO:GO:0003677 GO:GO:0009718 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0016036
HOGENOM:HOG000243133 ProtClustDB:CLSN2689090 EMBL:DQ205679
EMBL:AY058840 EMBL:AY079033 EMBL:AY086383 EMBL:AF488571
IPI:IPI00523379 RefSeq:NP_189199.1 UniGene:At.22148
ProteinModelPortal:Q9LS08 SMR:Q9LS08 IntAct:Q9LS08 STRING:Q9LS08
PRIDE:Q9LS08 EnsemblPlants:AT3G25710.1 GeneID:822159
KEGG:ath:AT3G25710 TAIR:At3g25710 eggNOG:NOG304577 OMA:RERINTH
PhylomeDB:Q9LS08 Genevestigator:Q9LS08 GO:GO:0080147 Uniprot:Q9LS08
Length = 344
Score = 125 (49.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
+H EAER+RRE++N LR+++PN +K DKASLL + I ++ EL+ + + + +
Sbjct: 135 SHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQI-TDTYQV 193
Query: 504 SGNSRDLSAFESNPNVESQN 523
DL+ +S+ N E N
Sbjct: 194 PTECDDLTV-DSSYNDEEGN 212
>UNIPROTKB|Q6ZA99 [details] [associations]
symbol:P0431A03.9 "Os08g0432800 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP004666 EMBL:AK109616 RefSeq:NP_001061870.1
UniGene:Os.56209 EnsemblPlants:LOC_Os08g33590.1 GeneID:4345648
KEGG:osa:4345648 eggNOG:NOG311977 OMA:TSAMMED
ProtClustDB:CLSN2697339 Uniprot:Q6ZA99
Length = 345
Score = 125 (49.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 34/102 (33%), Positives = 56/102 (54%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
+H EAER+RR+++N LR+++PN +K DKASLL + I ++ EL+ + M E+
Sbjct: 124 SHSEAERRRRQRINGHLARLRSLLPNTTKTDKASLLAEVIEHVKELKRQTSAM---MEDG 180
Query: 504 SGNSRDLSAFESNPNVESQNRAPDVDIQAAHDE---VVVRVS 542
+ +A P V ++++ AA DE +V R S
Sbjct: 181 AAGGEAAAA----PVVLLPTEDDELEVDAAADEGGRLVARAS 218
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 124 (48.7 bits), Expect = 0.00010, P = 0.00010
Identities = 21/52 (40%), Positives = 41/52 (78%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +E++RR K+N++ AL++++PN +K DKAS+L +AI Y+ +LQ +++++
Sbjct: 108 HNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 159
>TAIR|locus:2080615 [details] [associations]
symbol:bHLH39 "basic helix-loop-helix 39" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010106 "cellular response to iron ion
starvation" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0055072 "iron ion homeostasis" evidence=IGI]
InterPro:IPR011598 InterPro:IPR015660 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 PANTHER:PTHR13935 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL138655 GO:GO:0055072
HSSP:P61244 HOGENOM:HOG000238662 ProtClustDB:CLSN2683761
EMBL:AF488577 IPI:IPI00530143 PIR:T47758 RefSeq:NP_191257.1
UniGene:At.64158 ProteinModelPortal:Q9M1K0 SMR:Q9M1K0 IntAct:Q9M1K0
STRING:Q9M1K0 EnsemblPlants:AT3G56980.1 GeneID:824865
KEGG:ath:AT3G56980 TAIR:At3g56980 eggNOG:NOG265528
InParanoid:Q9M1K0 OMA:NCEELSQ PhylomeDB:Q9M1K0
Genevestigator:Q9M1K0 Uniprot:Q9M1K0
Length = 258
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 44/165 (26%), Positives = 80/165 (48%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASL---LGDAIAYINELQAKLKVMEAE 499
LNH +ER RR K+N F +LR+ +P + K S+ + ++ YI ELQ ++K + +
Sbjct: 79 LNHNASERDRRRKINSLFSSLRSCLPASGQSKKLSIPATVSRSLKYIPELQEQVKKLIKK 138
Query: 500 RENL----SGNSRDLSAFESNPNVESQNRAPDVDIQAAHD-EVVVRVSCP-LDSHPASRV 553
+E L SG R+ + P N V D EV+V++S + + S V
Sbjct: 139 KEELLVQISGQ-RNTECYVKQPPKAVANYISTVSATRLGDNEVMVQISSSKIHNFSISNV 197
Query: 554 IQAFKDAQITVVESKLSTGN-DMVFHTFVIKSQGSE--QLTKEKL 595
+ ++ + +V+ S + +F+T ++ + E +L E+L
Sbjct: 198 LSGLEEDRFVLVDMSSSRSQGERLFYTLHLQVEKIENYKLNCEEL 242
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 132 (51.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +ER+RR+++N+R AL+ ++P+ SK DKAS+L +AI Y+ LQ +L+VM
Sbjct: 262 HNLSERRRRDRINERMKALQELIPHCSKTDKASILDEAIDYLKSLQLQLQVM 313
Score = 37 (18.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 509 DLSAFESNPNVESQN 523
D SA ++NP + QN
Sbjct: 355 DQSAIQNNPGLVCQN 369
>TAIR|locus:2152262 [details] [associations]
symbol:BIM3 "AT5G38860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000070523 EMBL:AB009048 EMBL:AJ630499 EMBL:AY568671
EMBL:BT033131 IPI:IPI00534511 RefSeq:NP_198702.2 UniGene:At.50495
ProteinModelPortal:Q9FMB6 SMR:Q9FMB6 IntAct:Q9FMB6 PRIDE:Q9FMB6
EnsemblPlants:AT5G38860.1 GeneID:833877 KEGG:ath:AT5G38860
TAIR:At5g38860 eggNOG:NOG267159 InParanoid:Q9FMB6 OMA:TETRSFC
PhylomeDB:Q9FMB6 ProtClustDB:CLSN2918639 Genevestigator:Q9FMB6
Uniprot:Q9FMB6
Length = 298
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 445 HVEAERQRREKLNQRFYALRAVVP---NISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
H E E++RR K+N+RF +L ++P N K DKAS L + I YI+ LQ K+ + E +
Sbjct: 38 HSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYEDSHQ 97
Query: 502 NLSGNSRDLSAFE-SNPNVESQNRAPD-VDIQAAHDEVVVRVSCPLDSH 548
+ L + S+ +V +N P V +++D+V LD++
Sbjct: 98 MWYQSPTKLIPWRNSHGSVAEENDHPQIVKSFSSNDKVAASSGFLLDTY 146
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 126 (49.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 34/92 (36%), Positives = 51/92 (55%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER-ENL 503
H AER RRE++ +R +L+ +VPN +K DKAS+L + I Y+ LQ ++KV+ R
Sbjct: 141 HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGA 200
Query: 504 SGNSRDLS--AFESNPNVESQNRAPDVDIQAA 533
+ S +S A S+ N S A + Q A
Sbjct: 201 ASASSQISEDAGGSHENTSSSGEAKMTEHQVA 232
Score = 37 (18.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 155 FFLASMYFSFPRGEGG 170
F S+ F P+G GG
Sbjct: 88 FSTGSLPFHLPQGSGG 103
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 123 (48.4 bits), Expect = 0.00016, P = 0.00016
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER 500
H AER RRE++ +R AL+ +VPN +K DKAS+L + I Y+ LQ ++KV+ R
Sbjct: 149 HSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSR 204
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 127 (49.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 22/52 (42%), Positives = 41/52 (78%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +ER+RR+++N++ AL+ ++PN +K+DKAS+L +AI Y+ LQ ++++M
Sbjct: 317 HNLSERRRRDRINEKMRALQELIPNCNKIDKASMLDEAIEYLKTLQLQVQMM 368
Score = 44 (20.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 96 REPKEGEESEATRIPNIRLEDETQQRMRKRVLQKLHTLFGGSDEDNYAL 144
REP + E +P R E + Q ++ L + GG N++L
Sbjct: 98 REPSK-ESHGGLSVPTTRAEPQPQPQLAAAKLPRSSGSGGGEGVMNFSL 145
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 34/122 (27%), Positives = 63/122 (51%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H AER+RREK+N++ L+ ++P +K K S L DAI Y+ LQ++++ M + N +
Sbjct: 260 HNLAERRRREKINEKMKTLQQLIPRCNKSTKVSTLDDAIEYVKSLQSQIQGMMSPMMN-A 318
Query: 505 GNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRV----IQAFKDA 560
GN++ F + ++ P + + +++ S+PA R IQ F +
Sbjct: 319 GNTQQ---FMPHMAMDMNRPPPFIPFPGTSFPMPAQMAGVGPSYPAPRYPFPNIQTFDPS 375
Query: 561 QI 562
++
Sbjct: 376 RV 377
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 113 (44.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 418 ERTGTVEEXXXXXXXXXXXXXXEEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKAS 477
E T + + H +ER+RR+K+N+ AL+ ++P +K D++S
Sbjct: 255 EETNVENQGTEEARDSTSSKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTKTDRSS 314
Query: 478 LLGDAIAYINELQAKLKV 495
+L D I Y+ LQ+++++
Sbjct: 315 MLDDVIEYVKSLQSQIQM 332
Score = 52 (23.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 189 LSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELV----HSIRATFSSNS 244
L++D LA+ R + + IS G + LG V +VP + L+ SI AT + S
Sbjct: 133 LAADRPTGHILAER-RAENFMNISRQRGNIFLGGVEAVPSNSTLLSSATESIPATHGTES 191
Query: 245 SLATV 249
ATV
Sbjct: 192 R-ATV 195
>TAIR|locus:2093746 [details] [associations]
symbol:FMA "AT3G24140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010052
"guard cell differentiation" evidence=IMP] [GO:0045597 "positive
regulation of cell differentiation" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=RCA;IDA] [GO:0051782 "negative regulation of cell
division" evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0003677 GO:GO:0045597 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238962
GO:GO:0051782 EMBL:AB028621 GO:GO:0010052 EMBL:AK221324
EMBL:BT028961 EMBL:AF488624 IPI:IPI00523995 RefSeq:NP_189056.2
UniGene:At.37586 ProteinModelPortal:Q56YJ8 SMR:Q56YJ8 IntAct:Q56YJ8
STRING:Q56YJ8 PRIDE:Q56YJ8 EnsemblPlants:AT3G24140.1 GeneID:822000
KEGG:ath:AT3G24140 TAIR:At3g24140 eggNOG:NOG326823
InParanoid:Q56YJ8 OMA:KRRRLYG PhylomeDB:Q56YJ8
ProtClustDB:CLSN2680105 Genevestigator:Q56YJ8 Uniprot:Q56YJ8
Length = 414
Score = 121 (47.7 bits), Expect = 0.00036, P = 0.00036
Identities = 33/125 (26%), Positives = 63/125 (50%)
Query: 412 EASCRDERTGTVEEXXXXXXXXXXXXXXEEP----LNHVEAERQRREKLNQRFYALRAVV 467
E R+ + T +E EE + H+ ER RR+++N+ LR+++
Sbjct: 162 EEEDRENKNVTKKEVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLM 221
Query: 468 PN--ISKMDKASLLGDAIAYINELQAKLKVMEAE-RENLSGNS-RDLSAF---ESNPNVE 520
P + + D+AS++G AI ++ EL+ L+ +E++ R + G + RD++ S+P
Sbjct: 222 PGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITT 281
Query: 521 SQNRA 525
N+A
Sbjct: 282 VANQA 286
>ASPGD|ASPL0000066711 [details] [associations]
symbol:anbH1 species:162425 "Emericella nidulans"
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:BN001304 Gene3D:4.10.280.10
SUPFAM:SSF47459 EnsemblFungi:CADANIAT00000869 HOGENOM:HOG000174469
OMA:SFMDNSQ Uniprot:C8VDK0
Length = 292
Score = 118 (46.6 bits), Expect = 0.00040, P = 0.00040
Identities = 32/92 (34%), Positives = 52/92 (56%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEA--ERE 501
NH E ER+RRE +N+ + +VPN K +K ++L AI YIN+L + + M E+
Sbjct: 172 NHKEVERRRREAINEGINQIARLVPNCDK-NKGAILQRAIEYINQLHEEKRQMSERWEQS 230
Query: 502 NLSGNS--RDLSAFESNPNVESQNRAPDVDIQ 531
N++ + ++SA S VE NR D+ ++
Sbjct: 231 NMTTSHAINEISAQNSKLKVEV-NRRGDIALK 261
>UNIPROTKB|Q9FTQ1 [details] [associations]
symbol:P0665D10.21 "DNA binding protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:AP002861 EMBL:AP002745 RefSeq:NP_001042409.1 UniGene:Os.26488
STRING:Q9FTQ1 GeneID:4324583 KEGG:osa:4324583 OMA:VRFTFLI
ProtClustDB:CLSN2691217 Uniprot:Q9FTQ1
Length = 267
Score = 117 (46.2 bits), Expect = 0.00042, P = 0.00042
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQA 491
+H EAER+RRE++N LR +VP KMDKA+LL + + ++ +L++
Sbjct: 81 SHSEAERRRRERINAHLATLRTMVPCTDKMDKAALLAEVVGHVKKLKS 128
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 124 (48.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +ER+RR+++N++ AL+ +VP+ +K DKAS+L +AI Y+ LQ ++++M
Sbjct: 233 HNLSERRRRDRINEKLRALQELVPHCNKTDKASILDEAIEYLKSLQMQVQIM 284
Score = 39 (18.8 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 135 GGSDEDNYALGLDR 148
GG D+D LG+ R
Sbjct: 75 GGGDDDALGLGMGR 88
>TAIR|locus:2141216 [details] [associations]
symbol:B70 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR011598 PROSITE:PS50805 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161554
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:EF637083 EMBL:AL031187 EMBL:EF182720
EMBL:AY065362 EMBL:AY122937 IPI:IPI00529333 PIR:T05176
RefSeq:NP_193865.2 UniGene:At.28517 ProteinModelPortal:Q8VZ22
SMR:Q8VZ22 EnsemblPlants:AT4G21340.1 GeneID:827884
KEGG:ath:AT4G21340 TAIR:At4g21340 eggNOG:NOG319921
HOGENOM:HOG000095220 OMA:NESRMIS PhylomeDB:Q8VZ22
ProtClustDB:CLSN2690318 Genevestigator:Q8VZ22 Uniprot:Q8VZ22
Length = 301
Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKL--KVME 497
E P +H + + R+EKL R AL+ +V K D AS+L DAI YI LQ ++ KV
Sbjct: 181 ETP-SHFPSFKVRKEKLGDRITALQQLVSPFGKTDTASVLHDAIDYIKFLQEQITEKVST 239
Query: 498 AERENL--SGNSRDLSAFESNPNVESQNRAPDVDIQA 532
+ N SG + S SN N +QN +P D+++
Sbjct: 240 SPHLNSIGSGEQKQWSDKSSN-NTHNQNCSPRQDLRS 275
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 20/50 (40%), Positives = 38/50 (76%)
Query: 450 RQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
R+RRE++N R L+++VPN +K+D +++L DA+ Y+ LQ ++K++ +E
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 25/68 (36%), Positives = 42/68 (61%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS 504
H AER RRE++ +R AL+ +VPN +K D+A++L + + Y+ L+ ++KV+ R +
Sbjct: 144 HSIAERLRRERIAERMRALQELVPNTNKTDRAAMLDEILDYVKFLRLQVKVLSMSRLGGA 203
Query: 505 GNSRDLSA 512
G L A
Sbjct: 204 GAVAQLVA 211
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 613 599 0.00085 120 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 103
No. of states in DFA: 620 (66 KB)
Total size of DFA: 321 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 54.17u 0.07s 54.24t Elapsed: 00:00:07
Total cpu time: 54.18u 0.07s 54.25t Elapsed: 00:00:07
Start: Tue May 21 05:47:12 2013 End: Tue May 21 05:47:19 2013
WARNINGS ISSUED: 1