BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048817
(613 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 612 bits (1578), Expect = e-174, Method: Compositional matrix adjust.
Identities = 351/639 (54%), Positives = 432/639 (67%), Gaps = 80/639 (12%)
Query: 5 FNMGGNLWNDEDKAMGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQNKLSDLVDRPN 64
N+G +WN++DKA+ A++LG RA DYLL++S+SN NLLM +GSDE+LQNKLSDLV+RPN
Sbjct: 1 MNIGRLVWNEDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPN 60
Query: 65 ASNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQRMRK 124
ASNFSWNYAIFWQISRSK+GD VL WGDG CREPKEGE+SE RI ++ E+ET Q MRK
Sbjct: 61 ASNFSWNYAIFWQISRSKAGDLVLCWGDGYCREPKEGEKSEIVRILSMGREEETHQTMRK 120
Query: 125 RVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHVWLL 184
RVLQKLH LFGGS+E+N ALGLDRVTDTEMF L+SMYFSFPRGEGGPGKCFAS K VWL
Sbjct: 121 RVLQKLHDLFGGSEEENCALGLDRVTDTEMFLLSSMYFSFPRGEGGPGKCFASAKPVWLS 180
Query: 185 DALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATFSSNS 244
D + SDYCVRSFLAKSA IQT+VL+ TD GVVELGS +PES + + SIR+ F+ S
Sbjct: 181 DVVNSGSDYCVRSFLAKSAGIQTVVLVPTDLGVVELGSTSCLPESEDSILSIRSLFT--S 238
Query: 245 SLATVKPMAVALPVT-SEKKDENGLFPNLGILDRVEGVPKIFGQELNNSGHVHTPFS--- 300
SL V+ AVALPVT +EK D+N KIFG++L+NSG +
Sbjct: 239 SLPPVR--AVALPVTVAEKIDDNRT--------------KIFGKDLHNSGFLQHHQHHQQ 282
Query: 301 --------------REKLAVRKMEERPS--WEAY-TNGNRTAF--PGIRNG-VHGFSWGN 340
REKL VRKM++R +AY NGNR F PG N + +W
Sbjct: 283 QQQQPPQQQQHRQFREKLTVRKMDDRAPKRLDAYPNNGNRFMFSNPGTNNNTLLSPTWVQ 342
Query: 341 VQGVKQGIATEIFGSQTNNLQELVNGVREDFRINHYQSQK---PMQMQIDFSGATSRPNV 397
+ + I N++E+ + F SQ+ P QMQIDFS A+SR
Sbjct: 343 PENYTRPI----------NVKEVPSTDEFKFLPLQQSSQRLLPPAQMQIDFSAASSR--- 389
Query: 398 IARPLNADSEHSD--VEASCRDERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREK 455
A N+D E +A DE RPRKRGR+PANGR E LNHVEAERQRREK
Sbjct: 390 -ASENNSDGEGGGEWADAVGADESGNN----RPRKRGRRPANGRAEALNHVEAERQRREK 444
Query: 456 LNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFES 515
LNQRFYALR+VVPNISKMDKASLLGDA++YINEL AKLKVMEAERE L + S
Sbjct: 445 LNQRFYALRSVVPNISKMDKASLLGDAVSYINELHAKLKVMEAERERL--------GYSS 496
Query: 516 NPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDM 575
NP + + D+++Q + ++V VR++CPL+SHPASR+ AF+++++ V+ S L D
Sbjct: 497 NPPISLDS---DINVQTSGEDVTVRINCPLESHPASRIFHAFEESKVEVINSNLEVSQDT 553
Query: 576 VFHTFVIKSQGSEQLTKEKLIAAFSCE-SSSIQPLSSVG 613
V HTFV+K SE+LTKEKLI+A S E ++S+Q +S G
Sbjct: 554 VLHTFVVK---SEELTKEKLISALSREQTNSVQSRTSSG 589
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 546 bits (1408), Expect = e-154, Method: Compositional matrix adjust.
Identities = 319/626 (50%), Positives = 404/626 (64%), Gaps = 95/626 (15%)
Query: 5 FNMGGNLWNDEDKAMGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQNKLSDLVDRPN 64
NM W+DEDK++ +AVLG A D+L +S SN+NL + +G+D+ L KLS LVD PN
Sbjct: 1 MNMSDLGWDDEDKSVVSAVLGHLASDFLRANSNSNQNLFLVMGTDDTLNKKLSSLVDWPN 60
Query: 65 ASNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATR---IPNIRLEDETQQR 121
+ NFSWNYAIFWQ + S+SG VLGWGDG CREP E EES+ R N+ E+ET Q
Sbjct: 61 SENFSWNYAIFWQQTMSRSGQQVLGWGDGCCREPNEEEESKVVRSYNFNNMGAEEETWQD 120
Query: 122 MRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHV 181
MRKRVLQKLH LFGGSDEDNYAL L++VT TE+FFLASMYF F GEGGPG+C++SGKHV
Sbjct: 121 MRKRVLQKLHRLFGGSDEDNYALSLEKVTATEIFFLASMYFFFNHGEGGPGRCYSSGKHV 180
Query: 182 WLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATFS 241
WL DA+ SDYC RSF+AKSA I+TIV++ TDAGV+ELGSV S+PE++ LV S++A F
Sbjct: 181 WLSDAVNSESDYCFRSFMAKSAGIRTIVMVPTDAGVLELGSVWSLPENIGLVKSVQALF- 239
Query: 242 SNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEGVPKIFGQELNNSGHVHTPFSR 301
++ + + VTS + G+ K+FGQ+L SG P
Sbjct: 240 -------MRRVTQPVMVTSNT-------------NMTGGIHKLFGQDL--SGAHAYP--- 274
Query: 302 EKLAVRK-MEER---PSWEAYTNGNRTAFPGIRNGVHGFSWGNVQGVKQGIATEIFGSQT 357
+KL VR+ ++ER SWE Y N F G++ Q
Sbjct: 275 KKLEVRRNLDERFTPQSWEGYNNNKGPTF--------GYT-----------------PQR 309
Query: 358 NNLQELVNGVREDFRINHYQSQKPMQMQIDFSG----ATSRPNVIARPLNADSEHSDVEA 413
++++ L N N+ + QI+F+G A+S P+ N E S+
Sbjct: 310 DDVKVLENVNMVVDNNNY-------KTQIEFAGSSVAASSNPST-----NTQQEKSE--- 354
Query: 414 SCRDER----------TGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 463
SC ++R V+E+RPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL
Sbjct: 355 SCTEKRPVSLLAGAGIVSVVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 414
Query: 464 RAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQN 523
R+VVPNISKMDKASLLGDAI+YI ELQ K+K+ME ER G + L S N +
Sbjct: 415 RSVVPNISKMDKASLLGDAISYIKELQEKVKIMEDER---VGTDKSL----SESNTITVE 467
Query: 524 RAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIK 583
+P+VDIQA ++EVVVRV PLDSHPASR+IQA +++ ++++E+KLS D +FHTFVIK
Sbjct: 468 ESPEVDIQAMNEEVVVRVISPLDSHPASRIIQAMRNSNVSLMEAKLSLAEDTMFHTFVIK 527
Query: 584 S-QGSEQLTKEKLIAAFSCESSSIQP 608
S GS+ LTKEKLIAAF E+SS QP
Sbjct: 528 SNNGSDPLTKEKLIAAFYPETSSTQP 553
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 253 bits (647), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 302/618 (48%), Gaps = 84/618 (13%)
Query: 10 NLWNDEDKA--MGAAVLGTRAFDYLLTSSISNENLLMAVGSDEDLQNKLSDLVDRPNASN 67
NLW+ +D A M A + G L + ++++LQ +L L++ +N
Sbjct: 22 NLWSTDDDASVMEAFIGGGSDHSSLFPPLPPPPLPQV---NEDNLQQRLQALIE---GAN 75
Query: 68 FSWNYAIFWQISRSKSGD-------WVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQ 120
+W YA+FWQ S +G+ +LGWGDG + GEE E +R +Q
Sbjct: 76 ENWTYAVFWQSSHGFAGEDNNNNNTVLLGWGDGYYK----GEE-EKSRKKKSNPASAAEQ 130
Query: 121 RMRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKH 180
RKRV+++L++L G G + VTDTE FFL SM SF +G G PG+ F++
Sbjct: 131 EHRKRVIRELNSLISGGVGGGDEAGDEEVTDTEWFFLVSMTQSFVKGTGLPGQAFSNSDT 190
Query: 181 VWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATF 240
+WL + L+ C R+ + +QT+V ++T+ GVVELGS + +S +LV + F
Sbjct: 191 IWLSGSNALAGSSCERARQGQIYGLQTMVCVATENGVVELGSSEIIHQSSDLVDKVDTFF 250
Query: 241 SSNSSLATVKPMAVALPVTSEKKDENGLF---PNLGILDRVEGVPKIFGQELNNSGHVHT 297
+ N+ A L + D GL+ PN G+ + P +NN G+ T
Sbjct: 251 NFNNGGGEFGSWAFNLNPDQGENDP-GLWISEPN-GVDSGLVAAPV-----MNNGGNDST 303
Query: 298 PFSR----EKLAVRKMEERPSWEAYTNGNRTAFPGIRNGVHGFSWGNVQGVKQGIATEIF 353
S KL E P+ + + F +NG+
Sbjct: 304 SNSDSQPISKLCNGSSVENPNPKVLKSCEMVNF---KNGIE------------------- 341
Query: 354 GSQTNNLQELVNGVREDFRINHYQSQKPMQMQIDFSGATSRPNVIARPLNADSEHSDVEA 413
NG ED ++K + + G S +V+ N + V
Sbjct: 342 -----------NGQEED-----SSNKKRSPVSNNEEGMLSFTSVLPCDSNHSDLEASVAK 385
Query: 414 SCRDERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKM 473
R E++PRKRGRKPANGREEPLNHVEAERQRREKLNQRFY+LRAVVPN+SKM
Sbjct: 386 EAESNRVVVEPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVPNVSKM 445
Query: 474 DKASLLGDAIAYINELQAKLKVMEAERENL----------SGNSRDLSAFESNPNVESQN 523
DKASLLGDAI+YI+EL++KL+ E+++E L +GN++ N ES
Sbjct: 446 DKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGNAKSSVKDRKCLNQESSV 505
Query: 524 RAP-DVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVI 582
+VD++ + ++R+ C +HP ++ ++A K+ + V + LS ND++ +
Sbjct: 506 LIEMEVDVKIIGWDAMIRIQCSKRNHPGAKFMEALKELDLEVNHASLSVVNDLMIQQATV 565
Query: 583 KSQGSEQLTKEKLIAAFS 600
K G++ T+++L A +
Sbjct: 566 K-MGNQFFTQDQLKVALT 582
>sp|O23487|BH003_ARATH Transcription factor bHLH3 OS=Arabidopsis thaliana GN=BHLH3 PE=2
SV=1
Length = 467
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 132/188 (70%), Gaps = 16/188 (8%)
Query: 416 RDERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDK 475
+DE +E++PRKRGRKPANGREE LNHVEAERQRREKLNQRFYALRAVVPNISKMDK
Sbjct: 292 KDETLYLTDEQKPRKRGRKPANGREEALNHVEAERQRREKLNQRFYALRAVVPNISKMDK 351
Query: 476 ASLLGDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHD 535
ASLL DAI YI ++Q K++V E E++ + ESN Q +VD Q HD
Sbjct: 352 ASLLADAITYITDMQKKIRVYETEKQIMKRR-------ESN-----QITPAEVDYQQRHD 399
Query: 536 EVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQG---SEQLTK 592
+ VVR+SCPL++HP S+VIQ ++ ++ +S ++ + V HTF ++ QG +EQL K
Sbjct: 400 DAVVRLSCPLETHPVSKVIQTLRENEVMPHDSNVAITEEGVVHTFTLRPQGGCTAEQL-K 458
Query: 593 EKLIAAFS 600
+KL+A+ S
Sbjct: 459 DKLLASLS 466
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/331 (33%), Positives = 174/331 (52%), Gaps = 42/331 (12%)
Query: 7 MGGNLW-NDEDKAMGAAVLGTRAFDYLL-TSSISNENL--LMAVGSDEDLQNKLSDLVDR 62
MG W N ED+AM + +G+ A D+ + T+S SN L L++ SD +LQ L +V+
Sbjct: 1 MGQKFWENQEDRAMVESTIGSEACDFFISTASASNTALSKLVSPPSDSNLQQGLRHVVEG 60
Query: 63 PNASNFSWNYAIFWQISRSKSGD-WVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQ- 120
+ W+YA+FW S S D VL WGDG CR K+G E D +QQ
Sbjct: 61 SD-----WDYALFWLASNVNSSDGCVLIWGDGHCR-VKKGASGE----------DYSQQD 104
Query: 121 RMRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSF--PRGEGGPGKCFASG 178
+++RVL+KLH F GSDED+ + +TD +MF+LAS+YFSF + GP + SG
Sbjct: 105 EIKRRVLRKLHLSFVGSDEDHRLVKSGALTDLDMFYLASLYFSFRCDTNKYGPAGTYVSG 164
Query: 179 KHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRA 238
K +W D S Y VRSFLA+SA QT++ + ++GVVELGS+R +PE ++ +++
Sbjct: 165 KPLWAADLPSCLSYYRVRSFLARSAGFQTVLSVPVNSGVVELGSLRHIPEDKSVIEMVKS 224
Query: 239 TFSSNS---------------SLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEGVPK 283
F + SL KP ++++ + + +D+ G + + G +
Sbjct: 225 VFGGSDFVQAKEAPKIFGRQLSLGGAKPRSMSINFSPKTEDDTGFSLESYEVQAIGGSNQ 284
Query: 284 IFGQELNNSGHVHTPFSREKLAVRKMEERPS 314
++G E G T + ++ RK +P+
Sbjct: 285 VYGYE---QGKDETLYLTDEQKPRKRGRKPA 312
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 139/220 (63%), Gaps = 19/220 (8%)
Query: 397 VIARPLNADSEHSDVEASCRDERTGTVE--ERRPRKRGRKPANGREEPLNHVEAERQRRE 454
+ R DS+HSD+EAS E VE E++PRKRGRKPANGREEPLNHVEAERQRRE
Sbjct: 367 TVVRSAANDSDHSDLEASVVKEAI-VVEPPEKKPRKRGRKPANGREEPLNHVEAERQRRE 425
Query: 455 KLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLS---------G 505
KLNQRFY+LRAVVPN+SKMDKASLLGDAI+YINEL++KL+ E+++E + G
Sbjct: 426 KLNQRFYSLRAVVPNVSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEG 485
Query: 506 N------SRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKD 559
N SR SN + + + ++D++ +V++RV C HP +R ++A K+
Sbjct: 486 NNGKGCGSRAKERKSSNQDSTASSIEMEIDVKIIGWDVMIRVQCGKKDHPGARFMEALKE 545
Query: 560 AQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAAF 599
+ V + LS ND++ +K GS+ ++L A
Sbjct: 546 LDLEVNHASLSVVNDLMIQQATVK-MGSQFFNHDQLKVAL 584
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 111/197 (56%), Gaps = 23/197 (11%)
Query: 49 DEDLQNKLSDLVDRPNASNFSWNYAIFWQISR---SKSGD--WVLGWGDGSCREPKEGEE 103
++ LQ +L L++ ++ +W YAIFWQIS S +GD +LGWGDG + ++ E+
Sbjct: 49 EDTLQQRLQALIE---SAGENWTYAIFWQISHDFDSSTGDNTVILGWGDGYYKGEEDKEK 105
Query: 104 SEATRIPNIRLEDETQQRMRKRVLQKLHTLFGG----SDEDNYALGLDRVTDTEMFFLAS 159
+ + +Q RKRV+++L++L G SDE N + VTDTE FFL S
Sbjct: 106 KKNNT-------NTAEQEHRKRVIRELNSLISGGIGVSDESND----EEVTDTEWFFLVS 154
Query: 160 MYFSFPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVE 219
M SF G G PG+ F + + +WL + L+ C R+ + ++T+V I+T GVVE
Sbjct: 155 MTQSFVNGVGLPGESFLNSRVIWLSGSGALTGSGCERAGQGQIYGLKTMVCIATQNGVVE 214
Query: 220 LGSVRSVPESLELVHSI 236
LGS + +S +L+H +
Sbjct: 215 LGSSEVISQSSDLMHKV 231
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 132/208 (63%), Gaps = 16/208 (7%)
Query: 404 ADSEHSDVEASCRDERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 463
+S+HSD+EAS E E+RP+KRGRKPANGREEPLNHVEAERQRREKLNQRFYAL
Sbjct: 415 GESDHSDLEASVVKE---VAVEKRPKKRGRKPANGREEPLNHVEAERQRREKLNQRFYAL 471
Query: 464 RAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENLSGN---------SRDLSAFE 514
RAVVPN+SKMDKASLLGDAIAYINEL++K+ E+E+ + R SA
Sbjct: 472 RAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQIKNQLEEVKLELAGRKASASG 531
Query: 515 SNPNVESQNRAP---DVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLST 571
+ + + P +++++ + ++RV +HPA+R++ A D ++ V + +S
Sbjct: 532 GDMSSSCSSIKPVGMEIEVKIIGWDAMIRVESSKRNHPAARLMSALMDLELEVNHASMSV 591
Query: 572 GNDMVFHTFVIKSQGSEQLTKEKLIAAF 599
ND++ +K G T+E+L A+
Sbjct: 592 VNDLMIQQATVK-MGFRIYTQEQLRASL 618
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 10/194 (5%)
Query: 50 EDLQNKLSDLVDRPNASNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEAT-- 107
E LQ +L L++ ++ W YAIFWQ S SG VLGWGDG + GEE +A
Sbjct: 66 ETLQQRLQALIE---GTHEGWTYAIFWQPSYDFSGASVLGWGDGYYK----GEEDKANPR 118
Query: 108 -RIPNIRLEDETQQRMRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPR 166
R + Q RK+VL++L++L G + + VTDTE FFL SM SF
Sbjct: 119 RRSSSPPFSTPADQEYRKKVLRELNSLISGGVAPSDDAVDEEVTDTEWFFLVSMTQSFAC 178
Query: 167 GEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSV 226
G G GK FA+G VW+ + +LS C R+ + TI I + GVVE+GS +
Sbjct: 179 GAGLAGKAFATGNAVWVSGSDQLSGSGCERAKQGGVFGMHTIACIPSANGVVEVGSTEPI 238
Query: 227 PESLELVHSIRATF 240
+S +L++ +R F
Sbjct: 239 RQSSDLINKVRILF 252
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 95/158 (60%), Gaps = 9/158 (5%)
Query: 435 PANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLK 494
PA+GR++PLNHVEAER RREKLN RFYALRAVVPN+SKMDK SLL DA+ YINEL++K +
Sbjct: 334 PAHGRDKPLNHVEAERMRREKLNHRFYALRAVVPNVSKMDKTSLLEDAVCYINELKSKAE 393
Query: 495 VMEAERENLSGNSRDLSAFESNPNV--------ESQNRAPDVDIQAAH-DEVVVRVSCPL 545
+E E+ + +L N E + ++++ D+ +VRV
Sbjct: 394 NVELEKHAIEIQFNELKEIAGQRNAIPSVCKYEEKASEMMKIEVKIMESDDAMVRVESRK 453
Query: 546 DSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIK 583
D HP +R++ A D ++ V + +S ND++ +K
Sbjct: 454 DHHPGARLMNALMDLELEVNHASISVMNDLMIQQANVK 491
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 9/215 (4%)
Query: 32 LLTSSISNENLLMAVGSDEDLQNKLSDLVDRPNASNFSWNYAIFWQISRSK-SGDWVLGW 90
LLTS S L + + L +L ++ N ++ W+YAIFW+ S SG+ VL W
Sbjct: 14 LLTSDPSPPLLPANLSLETTLPKRLHAVL---NGTHEPWSYAIFWKPSYDDFSGEAVLKW 70
Query: 91 GDGSCREPKEGEESEATRIPNIRLEDETQQRMRKRVLQKLHTLFGG-----SDEDNYALG 145
GDG E + R L ++ R V+++L+ + G ++D
Sbjct: 71 GDGVYTGGNEEKTRGRLRRKKTILSSPEEKERRSNVIRELNLMISGEAFPVVEDDVSDDD 130
Query: 146 LDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARI 205
VTD E FFL SM +SF G G GK FAS V + + + C R+ +
Sbjct: 131 DVEVTDMEWFFLVSMTWSFGNGSGLAGKAFASYNPVLVTGSDLIYGSGCDRAKQGGDVGL 190
Query: 206 QTIVLISTDAGVVELGSVRSVPESLELVHSIRATF 240
QTI+ I + GV+EL S + + +L + IR F
Sbjct: 191 QTILCIPSHNGVLELASTEEIRPNSDLFNRIRFLF 225
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 67 NFSWNYAIFWQISRSKSGDWVLGWGDG------SCREPKEGEESEATRIPNIRLEDETQQ 120
N W+Y IFW +S S+SG VL WGDG R+ + E +A ++ R E ++
Sbjct: 24 NIQWSYGIFWSVSASQSG--VLEWGDGYYNGDIKTRKTIQASEIKADQLGLRRSEQLSEL 81
Query: 121 RMRKRVLQKLHTLFGGSDE-----DNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCF 175
V + + + AL + + DTE ++L M F F GEG PG+ F
Sbjct: 82 YESLSVAESSSSGVAAGSQVTRRASAAALSPEDLADTEWYYLVCMSFVFNIGEGMPGRTF 141
Query: 176 ASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHS 235
A+G+ +WL +A S RS LAKSA ++T+V GVVE+G+ + E + ++
Sbjct: 142 ANGEPIWLCNAHTADSKVFSRSLLAKSAAVKTVVCFPFLGGVVEIGTTEHITEDMNVIQC 201
Query: 236 IRATFSSNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRV 278
++ +F L P A LP S+ +N L P + D +
Sbjct: 202 VKTSF-----LEAPDPYATILPARSDYHIDNVLDPQQILGDEI 239
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%)
Query: 438 GREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVME 497
R+E NH E++RREKLN+RF LR ++P+I+K+DK S+L D I Y+ EL+ +++ +E
Sbjct: 435 ARDETGNHAVLEKKRREKLNERFMTLRKIIPSINKIDKVSILDDTIEYLQELERRVQELE 494
Query: 498 AERENLSGNSR 508
+ RE+ +R
Sbjct: 495 SCRESTDTETR 505
>sp|P13027|ARRS_MAIZE Anthocyanin regulatory R-S protein OS=Zea mays GN=R-S PE=2 SV=1
Length = 612
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 65 ASNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATRIPN-IRLEDETQQRMR 123
A + +W+YA+FW IS ++ G VL W DG E + +I N + L + R
Sbjct: 32 ARSINWSYALFWSISDTQPG--VLTWTDGFY-----NGEVKTRKISNSVELTSDQLVMQR 84
Query: 124 KRVLQKLHTLFGGSDEDNYA--------LGLDRVTDTEMFFLASMYFSFPRGEGGPGKCF 175
L++L+ + D A L + + DTE +++ SM ++F G+G PG+ F
Sbjct: 85 SDQLRELYEALLSGEGDRRAAPARPAGSLSPEDLGDTEWYYVVSMTYAFRPGQGLPGRSF 144
Query: 176 ASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHS 235
AS +HVWL +A S R+ LAKSA IQ+I+ I GV+ELG+ +VPE+ +LV
Sbjct: 145 ASDEHVWLCNAHLAGSKAFPRALLAKSASIQSILCIPVMGGVLELGTTDTVPEAPDLVSR 204
Query: 236 IRATF 240
A F
Sbjct: 205 ATAAF 209
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 34/174 (19%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
NHV +ER+RREKLN+ F L++++P+I +++KAS+L + IAY+ ELQ +++ +E+ RE
Sbjct: 418 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPA 477
Query: 504 SGNSRDLSAFESNPN------------VESQNRAPD--------------------VDIQ 531
S S + + P+ S+ ++P+ V +
Sbjct: 478 SRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGSSNVTVT 537
Query: 532 AAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQ 585
+ +V++ V C + +RV A K + V+ + S + F I++Q
Sbjct: 538 VSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDG--FMGLKIRAQ 589
>sp|P13526|ARLC_MAIZE Anthocyanin regulatory Lc protein OS=Zea mays GN=LC PE=2 SV=1
Length = 610
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 16/185 (8%)
Query: 65 ASNFSWNYAIFWQISRSKSGDWVLGWGDGSCREPKEGEESEATRIPN-IRLEDETQQRMR 123
A + +W+YA+FW IS ++ G VL W DG E + +I N + L + R
Sbjct: 32 ARSINWSYALFWSISDTQPG--VLTWTDGFY-----NGEVKTRKISNSVELTSDQLVMQR 84
Query: 124 KRVLQKLHTLFGGSDEDNYA--------LGLDRVTDTEMFFLASMYFSFPRGEGGPGKCF 175
L++L+ + D A L + + DTE +++ SM ++F G+G PG+ F
Sbjct: 85 SDQLRELYEALLSGEGDRRAAPARPAGSLSPEDLGDTEWYYVVSMTYAFRPGQGLPGRSF 144
Query: 176 ASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHS 235
AS +HVWL +A S R+ LAKSA IQ+I+ I GV+ELG+ +VPE+ +LV
Sbjct: 145 ASDEHVWLCNAHLAGSKAFPRALLAKSASIQSILCIPVMGGVLELGTTDTVPEAPDLVSR 204
Query: 236 IRATF 240
A F
Sbjct: 205 ATAAF 209
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 34/174 (19%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERENL 503
NHV +ER+RREKLN+ F L++++P+I +++KAS+L + IAY+ ELQ +++ +E+ RE
Sbjct: 416 NHVMSERKRREKLNEMFLVLKSLLPSIHRVNKASILAETIAYLKELQRRVQELESSREPA 475
Query: 504 SGNSRDLSAFESNPN------------VESQNRAPD--------------------VDIQ 531
S S + + P+ S+ ++P+ V +
Sbjct: 476 SRPSETTTRLITRPSRGNNESVRKEVCAGSKRKSPELGRDDVERPPVLTMDAGTSNVTVT 535
Query: 532 AAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQ 585
+ +V++ V C + +RV A K + V+ + S + F I++Q
Sbjct: 536 VSDKDVLLEVQCRWEELLMTRVFDAIKSLHLDVLSVQASAPDG--FMGLKIRAQ 587
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 67 NFSWNYAIFWQISRSKSGDWVLGWGDGSCR---EPKEGEESEATRIPNIRLEDETQQRMR 123
N W+Y IFW +S S+ G VL WGDG + ++ ++ +I + LE Q R
Sbjct: 23 NIQWSYGIFWSVSASQPG--VLEWGDGYYNGDIKTRKTIQAAEVKIDQLGLERSEQLREL 80
Query: 124 KRVLQKLHTLFGGSDE-----DNYALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASG 178
L + GS + AL + +TDTE ++L M F F GEG PG ++G
Sbjct: 81 YESLSLAESSASGSSQVTRRASAAALSPEDLTDTEWYYLVCMSFVFNIGEGIPGGALSNG 140
Query: 179 KHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRA 238
+ +WL +A S RS LAKSA +QT+V GV+E+G+ + E + ++ S++
Sbjct: 141 EPIWLCNAETADSKVFTRSLLAKSASLQTVVCFPFLGGVLEIGTTEHIKEDMNVIQSVKT 200
Query: 239 TF 240
F
Sbjct: 201 LF 202
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 29/181 (16%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
EE NH +E++RREKLN+RF LR+++P+ISK+DK S+L D I Y+ +LQ +++ +E+
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKIDKVSILDDTIEYLQDLQKRVQELESC 460
Query: 500 RENLSGNSRDLSAFESNPNVE----------SQNRAPDVD-------------------I 530
RE+ +R P+ E S+ + DV+ I
Sbjct: 461 RESADTETRITMMKRKKPDDEEERASANCMNSKRKGSDVNVGEDEPADIGYAGLTDNLRI 520
Query: 531 QAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQL 590
+ +EVV+ + C ++ D + + STG+ ++ T K +G++
Sbjct: 521 SSLGNEVVIELRCAWREGILLEIMDVISDLNLDSHSVQSSTGDGLLCLTVNCKHKGTKIA 580
Query: 591 T 591
T
Sbjct: 581 T 581
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 70 WNYAIFWQIS-RSKSGDWVLGWGDGSCREPKEGEESEATRIPNIRLEDETQQRMRKRVLQ 128
W Y++FWQ + + W G+ +G+ + K + +E T E R + L+
Sbjct: 33 WTYSVFWQFCPQQRVLVWGNGYYNGAIKTRKTTQPAEVTA--------EEAALERSQQLR 84
Query: 129 KLH-TLFGGSDEDN----YALGLDRVTDTEMFFLASMYFSFPRGEGGPGKCFASGKHVWL 183
+L+ TL G AL + +T+TE F+L + FSFP G PGK +A KHVWL
Sbjct: 85 ELYETLLAGESTSEARACTALSPEDLTETEWFYLMCVSFSFPPPSGMPGKAYARRKHVWL 144
Query: 184 LDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESLELVHSIRATF 240
A ++ S R+ LAKSA+IQT+V I GVVELG+ + V E +E V ++ F
Sbjct: 145 SGANEVDSKTFSRAILAKSAKIQTVVCIPMLDGVVELGTTKKVREDVEFVELTKSFF 201
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 46/57 (80%)
Query: 441 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVME 497
E L+HV AER+RREKLN++F LR++VP ++KMDK S+LGD IAY+N L+ ++ +E
Sbjct: 360 EDLSHVVAERRRREKLNEKFITLRSMVPFVTKMDKVSILGDTIAYVNHLRKRVHELE 416
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 77/136 (56%), Gaps = 14/136 (10%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAEREN 502
L+HVEAE+QRREKLN RFYALRA+VP +S+MDKASLL DA++YI L++K+ +E E +
Sbjct: 248 LSHVEAEKQRREKLNHRFYALRAIVPKVSRMDKASLLSDAVSYIESLKSKIDDLETEIKK 307
Query: 503 LSGNSRD------------LSAFESNPNVESQNRAPDVDIQA--AHDEVVVRVSCPLDSH 548
+ D ++ N NR D+++Q +E ++RV +H
Sbjct: 308 MKMTETDKLDNSSSNTSPSSVEYQVNQKPSKSNRGSDLEVQVKIVGEEAIIRVQTENVNH 367
Query: 549 PASRVIQAFKDAQITV 564
P S ++ A + V
Sbjct: 368 PTSALMSALMEMDCRV 383
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 89/239 (37%), Gaps = 52/239 (21%)
Query: 52 LQNKLSDLVDRPNASNFSWNYAIFWQ-ISRSKSGDWVLGWGDGSCREPKEGEESEATRIP 110
LQ KL +V+ S W Y IFWQ + +S L W DG K E
Sbjct: 35 LQQKLRFVVE---TSPDRWAYVIFWQKMFDDQSDRSYLVWVDGHFCGNKNNNSQENYTTN 91
Query: 111 NIRLEDETQQRMRKRVLQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPRGEG- 169
+I E L +D D E+F+ AS Y GE
Sbjct: 92 SIECE----------------------------LMMDGGDDLELFYAASFY-----GEDR 118
Query: 170 GPGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPES 229
P K + VWL +L R+ A + T+V I + G++ELGS S+ ++
Sbjct: 119 SPRKEVSDESLVWLTGPDELRFSNYERAKEAGFHGVHTLVSIPINNGIIELGSSESIIQN 178
Query: 230 LELVHSIRATFSSNSSLATVKPMAVALPVTSEKKDENGLFPNLGILDRVEGVPKIFGQE 288
++ +++ F S T++ ++ G +P + D + + FG E
Sbjct: 179 RNFINRVKSIFGSGK--------------TTKHTNQTGSYPKPAVSDHSKSGNQQFGSE 223
>sp|Q2HIV9|BH035_ARATH Transcription factor bHLH35 OS=Arabidopsis thaliana GN=BHLH35 PE=2
SV=1
Length = 248
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 26/190 (13%)
Query: 420 TGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLL 479
+G+ + P PA+ ++ +ER RR+KLNQR +ALR+VVPNI+KMDKAS++
Sbjct: 37 SGSYDSSSPDGAASSPAS------KNIVSERNRRQKLNQRLFALRSVVPNITKMDKASII 90
Query: 480 GDAIAYINELQAKLKVMEAERENLSGNSRDLSAFESN-------PNVESQNRAPDVDIQA 532
DAI+YI LQ + K +EAE L + +F + P + + D
Sbjct: 91 KDAISYIEGLQYEEKKLEAEIRELESTPKSSLSFSKDFDRDLLVPVTSKKMKQLDSGSST 150
Query: 533 AHDEV-------------VVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHT 579
+ EV VV V+C + ++ + F+ + ++ S L++ + M+FHT
Sbjct: 151 SLIEVLELKVTFMGERTMVVSVTCNKRTDTMVKLCEVFESLNLKILTSNLTSFSGMIFHT 210
Query: 580 FVIKSQGSEQ 589
I++ EQ
Sbjct: 211 VFIEADEEEQ 220
>sp|Q8W2F1|BH012_ARATH Transcription factor MYC1 OS=Arabidopsis thaliana GN=BHLH12 PE=1
SV=1
Length = 526
Score = 76.6 bits (187), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 70 WNYAIFWQISRSKSGDWVLGWGDGS----CREPKEGEESEATRIPNIRLEDETQQRMRKR 125
W+YAIFW S ++ G VL WG+G ++ K+ ES + + + + +RK
Sbjct: 36 WSYAIFWSSSLTQPG--VLEWGEGCYNGDMKKRKKSYES------HYKYGLQKSKELRKL 87
Query: 126 VLQKLHTLFGGSDEDNYA---------------LGLDRVTDTEMFFLASMYFSFPRGEGG 170
L L G + + L D ++D E ++L SM + F +
Sbjct: 88 YLSMLEGDSGTTVSTTHDNLNDDDDNCHSTSMMLSPDDLSDEEWYYLVSMSYVFSPSQCL 147
Query: 171 PGKCFASGKHVWLLDALKLSSDYCVRSFLAKSARIQTIVLISTDAGVVELGSVRSVPESL 230
PG+ A+G+ +WL +A + RS LA+SA IQT+V GV+ELG + E
Sbjct: 148 PGRASATGETIWLCNAQYAENKLFSRSLLARSASIQTVVCFPYLGGVIELGVTELISEDH 207
Query: 231 ELVHSIRATF 240
L+ +I++
Sbjct: 208 NLLRNIKSCL 217
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 40/211 (18%)
Query: 415 CRDERTGTVEERRPRKRGRKPANGREEPLNHV------------EAERQRREKLNQRFYA 462
C + +G V++++ + RK + + PL H + + R K N++F
Sbjct: 298 CEQQVSGFVQKKKSQNVLRKILH--DVPLMHTKRMFPSQNSGLNQDDPSDRRKENEKFSV 355
Query: 463 LRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEA--------ER-----ENL------ 503
LR +VP ++++DK S+L + I Y+ EL+A+++ +E+ ER ENL
Sbjct: 356 LRTMVPTVNEVDKESILNNTIKYLQELEARVEELESCMGSVNFVERQRKTTENLNDSVLI 415
Query: 504 ---SGNSRDLSAFESNPNVESQ----NRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQA 556
SGN D + + N Q + ++ EVV+ V C + + +++
Sbjct: 416 EETSGNYDDSTKIDDNSGETEQVTVFRDKTHLRVKLKETEVVIEVRCSYRDYIVADIMET 475
Query: 557 FKDAQITVVESKLSTGNDMVFHTFVIKSQGS 587
+ + + T N + K +G+
Sbjct: 476 LSNLHMDAFSVRSHTLNKFLTLNLKAKFRGA 506
>sp|Q9LPW3|SCRM2_ARATH Transcription factor SCREAM2 OS=Arabidopsis thaliana GN=SCRM2 PE=1
SV=1
Length = 450
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 442 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
P ++ AER+RR+KLN R Y LR+VVP ISKMD+AS+LGDAI Y+ EL ++ + E E
Sbjct: 265 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHTELE 324
Query: 502 NLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQ 561
+ +S L P S V CP S P+ + Q
Sbjct: 325 STPPSSSSLHPLTPTPQTLSYR--------------VKEELCPSSSLPSPK-------GQ 363
Query: 562 ITVVESKLSTGNDMVFHTFVIKSQG 586
VE +L G + H F + G
Sbjct: 364 QPRVEVRLREGKAVNIHMFCGRRPG 388
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 33/181 (18%)
Query: 448 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE------ 501
AER+RR+KLN R YALR++VP I+K+D+AS+LGDAI Y+ ELQ + K ++ E E
Sbjct: 318 AERRRRKKLNDRLYALRSLVPRITKLDRASILGDAINYVKELQNEAKELQDELEENSETE 377
Query: 502 --------NLSGNSRDLSAFE------------------SNPNVESQNRAPDVDI-QAAH 534
+S N ++ F N N + Q P VD+ Q
Sbjct: 378 DGSNRPQGGMSLNGTVVTGFHPGLSCNSNVPSVKQDVDLENSNDKGQEMEPQVDVAQLDG 437
Query: 535 DEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLSTGNDMVFHTFVIKSQGSEQLTKEK 594
E V+V C +R+++A + V + + +V + F ++ +E + E
Sbjct: 438 REFFVKVICEYKPGGFTRLMEALDSLGLEVTNANTTRYLSLVSNVFKVEKNDNEMVQAEH 497
Query: 595 L 595
+
Sbjct: 498 V 498
>sp|Q700E3|BH027_ARATH Transcription factor bHLH27 OS=Arabidopsis thaliana GN=BHLH27 PE=2
SV=1
Length = 263
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 5/88 (5%)
Query: 420 TGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLL 479
+G+ E P PA+ + +V +ER RR+KLNQR +ALR+VVPNISK+DKAS++
Sbjct: 35 SGSGESSSPDGAATSPASSK-----NVVSERNRRQKLNQRLFALRSVVPNISKLDKASVI 89
Query: 480 GDAIAYINELQAKLKVMEAERENLSGNS 507
D+I Y+ EL + K +EAE L S
Sbjct: 90 KDSIDYMQELIDQEKTLEAEIRELESRS 117
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 411 VEASCRDERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNI 470
+EA + + R+ KR + + + +H+ AER+RREKL QRF AL A+VP +
Sbjct: 119 LEAQVQPHQKSDEFNRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALVPGL 178
Query: 471 SKMDKASLLGDAIAYINELQAKLKVMEAEREN---------------LSGNSRDLSAFES 515
KMDKAS+LGDA+ +I LQ ++ +E +++ L N++ S+ S
Sbjct: 179 KKMDKASVLGDALKHIKYLQERVGELEEQKKERRLESMVLVKKSKLILDDNNQSFSS--S 236
Query: 516 NPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITVVES 567
+ S P+++++ + ++V++++ C ++++ + I + S
Sbjct: 237 CEDGFSDLDLPEIEVRFSDEDVLIKILCEKQKGHLAKIMAEIEKLHILITNS 288
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 6/83 (7%)
Query: 414 SCRDERTGTVEER------RPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVV 467
S +DE G E + R KR + + +H+ AER+RREKL QRF AL A++
Sbjct: 90 SPKDEEIGLPEHKKAELIIRGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALI 149
Query: 468 PNISKMDKASLLGDAIAYINELQ 490
P + KMDKAS+LGDAI +I LQ
Sbjct: 150 PGLKKMDKASVLGDAIKHIKYLQ 172
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 95/193 (49%), Gaps = 36/193 (18%)
Query: 366 GVREDFRINHYQSQKPMQMQIDFSGATSRPNVIARPLNADSEHSDVEASCRDERTGTVEE 425
V+ +IN+ Q + DFS NVI+ P E D+ G +
Sbjct: 61 AVKPMMKINNKQQL----ISFDFSS-----NVISSPA--------AEEIIMDKLVGRGTK 103
Query: 426 RRPRKRG-RKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIA 484
R+ G R P +E HV AER+RREKL+++F AL A++P + K DK ++L DAI+
Sbjct: 104 RKTCSHGTRSPVLAKE----HVLAERKRREKLSEKFIALSALLPGLKKADKVTILDDAIS 159
Query: 485 YINELQAKLKVMEAER------ENLSGNSRDLSAFESNPN--------VESQNRAPDVDI 530
+ +LQ +L+ ++ E+ E++ + F+ PN +E P+++
Sbjct: 160 RMKQLQEQLRTLKEEKEATRQMESMILVKKSKVFFDEEPNLSCSPSVHIEFDQALPEIEA 219
Query: 531 QAAHDEVVVRVSC 543
+ + +++++R+ C
Sbjct: 220 KISQNDILIRILC 232
>sp|Q9LSE2|ICE1_ARATH Transcription factor ICE1 OS=Arabidopsis thaliana GN=SCRM PE=1 SV=1
Length = 494
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%)
Query: 442 PLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAERE 501
P ++ AER+RR+KLN R Y LR+VVP ISKMD+AS+LGDAI Y+ EL ++ + E E
Sbjct: 305 PAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELE 364
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 3/66 (4%)
Query: 438 GREEP---LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLK 494
GR EP HV AER+RR+KLN+R AL A++P + K DKA++L DAI ++ +LQ ++K
Sbjct: 123 GRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQERVK 182
Query: 495 VMEAER 500
+E ER
Sbjct: 183 KLEEER 188
>sp|Q0V7X4|FIT_ARATH Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION
FACTOR OS=Arabidopsis thaliana GN=FIT PE=1 SV=1
Length = 318
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 44/52 (84%)
Query: 448 AERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
+ER+RR ++ + YALR++VPNI+KMDKAS++GDA+ Y+ ELQ++ K ++++
Sbjct: 135 SERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVLYVQELQSQAKKLKSD 186
>sp|Q9LXA9|BH061_ARATH Transcription factor bHLH61 OS=Arabidopsis thaliana GN=BHLH61 PE=2
SV=1
Length = 315
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 68/116 (58%), Gaps = 5/116 (4%)
Query: 429 RKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINE 488
+KR K G +P ++ AER+RR++LN R LR++VP I+KMD+ S+LGDAI Y+ E
Sbjct: 138 KKRSNKKLEG--QPSKNLMAERRRRKRLNDRLSLLRSIVPKITKMDRTSILGDAIDYMKE 195
Query: 489 LQAKLKVMEAERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCP 544
L K+ ++ + + L NS LS +N ++ + +VD + + + + CP
Sbjct: 196 LLDKINKLQEDEQELGSNSH-LSTLITNESMVRNSLKFEVDQREVNTH--IDICCP 248
>sp|Q8GZ38|UNE10_ARATH Transcription factor UNE10 OS=Arabidopsis thaliana GN=UNE10 PE=2
SV=1
Length = 399
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 40/52 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H ++ER+RR+K+NQR L+ +VPN SK DKAS+L + I Y+ +LQA++ +M
Sbjct: 218 HNQSERKRRDKINQRMKTLQKLVPNSSKTDKASMLDEVIEYLKQLQAQVSMM 269
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 40/55 (72%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
++ +ER+RRE++NQ Y LRAVVP I+K++K + DA+ YINEL + + +E E
Sbjct: 265 NLHSERKRRERINQAMYGLRAVVPKITKLNKIGIFSDAVDYINELLVEKQKLEDE 319
>sp|Q9LSL1|BH093_ARATH Transcription factor bHLH93 OS=Arabidopsis thaliana GN=BHLH93 PE=1
SV=1
Length = 351
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 441 EPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+P ++ AER+RR++LN R LR++VP ISKMD+ S+LGDAI Y+ EL K+ ++ E
Sbjct: 175 QPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSILGDAIDYMKELLDKINKLQDEE 234
Query: 501 ENL--SGNSRDLSAF----ESNPNVESQNRAPDVDIQAAHDEVVVRVSC 543
+ L S NS F + N N +P +I ++ V + C
Sbjct: 235 QELGNSNNSHHSKLFGDLKDLNANEPLVRNSPKFEIDRRDEDTRVDICC 283
>sp|Q56YJ8|FAMA_ARATH Transcription factor FAMA OS=Arabidopsis thaliana GN=FMA PE=1 SV=1
Length = 414
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 103/227 (45%), Gaps = 46/227 (20%)
Query: 424 EERRPRKRGRKPANGRE---EPLNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASL 478
E + RKR R E + + H+ ER RR+++N+ LR+++P + + D+AS+
Sbjct: 175 EVKSKRKRARTSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASI 234
Query: 479 LGDAIAYINELQAKLKVMEAE--RENLSGNSRDLS-------------AFESNPNV---- 519
+G AI ++ EL+ L+ +E++ R L RD++ A ++ P +
Sbjct: 235 IGGAIEFVRELEQLLQCLESQKRRRILGETGRDMTTTTTSSSSPITTVANQAQPLIITGN 294
Query: 520 ---------------ESQNRAPDVDIQAAHDEVVVRVSCPLDSHPASRVIQAFKDAQITV 564
E+++ DV+++ + ++++ + I A +D +++
Sbjct: 295 VTELEGGGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSI 354
Query: 565 VESKLSTGNDMVFHTFVIKSQGSEQLTKEKLIAAFSCESSSIQPLSS 611
+ + ++T V ++F +K + T E + +SSIQ + S
Sbjct: 355 LHTNITTMEQTVLYSFNVKITSETRFTAEDI-------ASSIQQIFS 394
>sp|O81900|DYT1_ARATH Transcription factor DYSFUNCTIONAL TAPETUM 1 OS=Arabidopsis
thaliana GN=DYT1 PE=2 SV=1
Length = 207
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 38/50 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLK 494
++EAER+RREKL+ R ALR+ VP ++ M KAS++ DAI YI ELQ +K
Sbjct: 33 NLEAERRRREKLHCRLMALRSHVPIVTNMTKASIVEDAITYIGELQNNVK 82
>sp|O80536|PIF3_ARATH Transcription factor PIF3 OS=Arabidopsis thaliana GN=PIF3 PE=1 SV=1
Length = 524
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 405 DSEHSDVEASCRDERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALR 464
D DVE D R +E P + G R + H +ER+RR+++N++ AL+
Sbjct: 313 DCHSEDVEEESGDGR----KEAGPSRTGLGSKRSRSAEV-HNLSERRRRDRINEKMRALQ 367
Query: 465 AVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
++PN +K+DKAS+L +AI Y+ LQ ++++M
Sbjct: 368 ELIPNCNKVDKASMLDEAIEYLKSLQLQVQIM 399
>sp|P0CB25|BH131_ARATH Transcription factor bHLH131 OS=Arabidopsis thaliana GN=BHLH131
PE=2 SV=1
Length = 256
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQ 490
H +AER+RR ++N +F LR ++PN+ K DKAS+LG+ + Y NEL+
Sbjct: 96 HSDAERRRRLRINSQFATLRTILPNLVKQDKASVLGETVRYFNELK 141
>sp|Q9LSQ3|BH082_ARATH Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2
SV=1
Length = 297
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 423 VEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDA 482
V ++PR R R+ +P H AER RRE++ +R +L+ +VPN +K DKAS+L +
Sbjct: 92 VVRQKPRVRARR--GQATDP--HSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEI 147
Query: 483 IAYINELQAKLKVMEAER 500
I Y+ LQ ++KV+ R
Sbjct: 148 IEYVRFLQLQVKVLSMSR 165
>sp|Q700E4|BH067_ARATH Transcription factor bHLH67 OS=Arabidopsis thaliana GN=BHLH67 PE=2
SV=1
Length = 358
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 428 PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAIAY 485
P K + N R +NH+ ER RR ++N+ +LRA++P I + D+AS++G AI Y
Sbjct: 166 PSKNNEEIENQR---INHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINY 222
Query: 486 INELQAKLKVMEAE-RENLSGNSR-------DLSAFESN---PNVESQNRAPDVDIQAAH 534
+ L+ ++ +E++ R NS LS SN +E Q P ++
Sbjct: 223 VKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIEATVIQ 282
Query: 535 DEVVVRVSCPLDSHPASRVIQAFKDAQITVVESKLST 571
+ V ++V C + I + + ++TV+ ++T
Sbjct: 283 NHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITT 319
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 413 ASCRDERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISK 472
AS GTV P+ R + A + H AER RRE++ +R AL+ +VPN +K
Sbjct: 118 ASASTATGGTVAAP-PQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK 176
Query: 473 MDKASLLGDAIAYINELQAKLKVMEAER 500
DKAS+L + I Y+ LQ ++KV+ R
Sbjct: 177 TDKASMLDEIIDYVKFLQLQVKVLSMSR 204
>sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2
SV=1
Length = 254
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 27/157 (17%)
Query: 444 NHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAK------LKVME 497
+H AE++RR+++N ALR +VPN K+DKA+LL I + EL+ K + +
Sbjct: 66 SHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLP 125
Query: 498 AERENLSGNSRDLSAFESNPNVESQNRAPDVDIQAAHDEVVVRVSCPLDSHP--ASRVIQ 555
E + ++ +S FESN N ++ + S + P S +I+
Sbjct: 126 TEADEVTVQPETISDFESNTNT-----------------IIFKASFCCEDQPEAISEIIR 168
Query: 556 AFKDAQITVVESK-LSTGNDMVFHTFVIKSQGSEQLT 591
Q+ ++++ +S G M + F++K + T
Sbjct: 169 VLTKLQLETIQAEIISVGGRMRIN-FILKDSNCNETT 204
>sp|Q8L5W8|PIL1_ARATH Transcription factor PIL1 OS=Arabidopsis thaliana GN=PIL1 PE=1 SV=1
Length = 416
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 431 RGRKPANGREEPLN-HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINEL 489
R RKP R+ H ER+RR++ N++ AL+ ++PN K DKASLL +AI Y+ L
Sbjct: 219 RTRKPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYKDDKASLLDEAIKYMRTL 278
Query: 490 QAKLKVM 496
Q ++++M
Sbjct: 279 QLQVQMM 285
>sp|Q8S3D5|BH069_ARATH Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2
SV=2
Length = 310
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 425 ERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIA 484
+ +P+ R R+ +P H AER RRE++ +R +L+ +VPN +K DKAS+L + I
Sbjct: 125 QTKPKVRARR--GQATDP--HSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDEIID 180
Query: 485 YINELQAKLKVMEAER 500
Y+ LQ ++KV+ R
Sbjct: 181 YVKFLQLQVKVLSMSR 196
>sp|Q8GZM7|PIF1_ARATH Transcription factor PIF1 OS=Arabidopsis thaliana GN=PIF1 PE=1 SV=1
Length = 478
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +ER+RR+++N+R AL+ ++P +K DKAS+L +AI Y+ LQ ++++M
Sbjct: 289 HNLSERKRRDRINERMKALQELIPRCNKSDKASMLDEAIEYMKSLQLQIQMM 340
>sp|Q84TK1|BH010_ARATH Transcription factor bHLH10 OS=Arabidopsis thaliana GN=BHLH10 PE=2
SV=1
Length = 458
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 5/60 (8%)
Query: 430 KRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINEL 489
++GR R P ER+RR N RF+ L+ ++PN +K+D+AS++G+AI YI EL
Sbjct: 238 RKGRGSRKSRTSP-----TERERRVHFNDRFFDLKNLIPNPTKIDRASIVGEAIDYIKEL 292
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 8/89 (8%)
Query: 420 TGTVE-ERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASL 478
+G +E + R++GR + +P ER+RR LN+R+ AL+ ++P+ SK D+AS+
Sbjct: 194 SGIIEFSKEIRRKGR--GKRKNKPFT---TERERRCHLNERYEALKLLIPSPSKGDRASI 248
Query: 479 LGDAIAYINELQAKLKVME--AERENLSG 505
L D I YINEL+ ++ ++ ER+ G
Sbjct: 249 LQDGIDYINELRRRVSELKYLVERKRCGG 277
>sp|Q9SVU7|BH056_ARATH Putative transcription factor bHLH056 OS=Arabidopsis thaliana
GN=BHLH56 PE=4 SV=2
Length = 445
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 415 CRDERTGTVEER--RPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISK 472
R+E GT E R RKR R H AER+RREK+N++ L+ ++P +K
Sbjct: 235 AREETHGTEEARGSTSRKRSRTAEM-------HNLAERRRREKINEKMKTLQQLIPRCNK 287
Query: 473 MDKASLLGDAIAYINELQAKLKVMEAERENLSGNSRDL 510
K S L DAI Y+ LQ++++ M + N +GN++
Sbjct: 288 STKVSTLDDAIEYVKSLQSQIQGMMSPMMN-AGNTQQF 324
>sp|Q9FHA2|ALC_ARATH Transcription factor ALC OS=Arabidopsis thaliana GN=ALC PE=2 SV=1
Length = 210
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +E++RR K+N++ AL+ ++PN +K DKAS+L +AI Y+ +LQ +++ +
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNKTDKASMLDEAIEYLKQLQLQVQTL 149
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 41/52 (78%)
Query: 445 HVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVM 496
H +E++RR ++N++ AL++++PN +K DKAS+L +AI Y+ +LQ +++++
Sbjct: 202 HNLSEKRRRSRINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQML 253
>sp|Q56XR0|BH071_ARATH Transcription factor bHLH71 OS=Arabidopsis thaliana GN=BHLH71 PE=1
SV=1
Length = 327
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 10/86 (11%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPN--ISKMDKASLLGDAIAYINELQAKLKVMEAER 500
+ H+ ER RR ++NQ LR+++P K D+AS++G AI +I EL+ KL +EA++
Sbjct: 88 MTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELEHKLLSLEAQK 147
Query: 501 EN--------LSGNSRDLSAFESNPN 518
+ S S+D + + NP+
Sbjct: 148 HHNAKLNQSVTSSTSQDSNGEQENPH 173
>sp|Q700C7|SPCH_ARATH Transcription factor SPEECHLESS OS=Arabidopsis thaliana GN=SPCH
PE=1 SV=1
Length = 364
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 440 EEPLNHVEAERQRREKLNQRFYALRAVVP--NISKMDKASLLGDAIAYINELQAKLKVME 497
++ ++HV ER RR+++N+ LR+++P + + D+AS++G + YI+ELQ L+ +E
Sbjct: 99 QQKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLE 158
Query: 498 AERE 501
A+++
Sbjct: 159 AKKQ 162
>sp|Q8VZ22|BH103_ARATH Transcription factor bHLH103 OS=Arabidopsis thaliana GN=BHLH103
PE=2 SV=1
Length = 301
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 413 ASCR--DERTGTVEERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNI 470
+C+ E++G +E+ + ++P R E +H + + R+EKL R AL+ +V
Sbjct: 154 TTCKRASEKSGELEDIESSQPLKRP---RLETPSHFPSFKVRKEKLGDRITALQQLVSPF 210
Query: 471 SKMDKASLLGDAIAYINELQAKLKVMEAERENL----SGNSRDLSAFESNPNVESQNRAP 526
K D AS+L DAI YI LQ ++ + +L SG + S SN N +QN +P
Sbjct: 211 GKTDTASVLHDAIDYIKFLQEQITEKVSTSPHLNSIGSGEQKQWSDKSSN-NTHNQNCSP 269
Query: 527 DVDIQA 532
D+++
Sbjct: 270 RQDLRS 275
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 443 LNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKL-KVMEAERE 501
L H+ +ER+RREKLN+ F ALR+++P +K DKAS+L A ++ LQ ++ K++E RE
Sbjct: 288 LQHMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNRE 347
>sp|Q3E7L7|BH139_ARATH Transcription factor bHLH139 OS=Arabidopsis thaliana GN=BHLH139
PE=4 SV=1
Length = 223
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 38/50 (76%)
Query: 450 RQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQAKLKVMEAE 499
R+RRE++N R L+++VPN +K+D +++L DA+ Y+ LQ ++K++ +E
Sbjct: 148 RKRRERINDRLKTLQSLVPNGTKVDISTMLEDAVHYVKFLQLQIKLLSSE 197
>sp|Q9FMB6|BIM3_ARATH Transcription factor BIM3 OS=Arabidopsis thaliana GN=BIM3 PE=1 SV=1
Length = 298
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 445 HVEAERQRREKLNQRFYALRAVVP---NISKMDKASLLGDAIAYINELQAKLKVME 497
H E E++RR K+N+RF +L ++P N K DKAS L + I YI+ LQ K+ + E
Sbjct: 38 HSETEQRRRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYE 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,437,374
Number of Sequences: 539616
Number of extensions: 9471662
Number of successful extensions: 27106
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 26861
Number of HSP's gapped (non-prelim): 405
length of query: 613
length of database: 191,569,459
effective HSP length: 123
effective length of query: 490
effective length of database: 125,196,691
effective search space: 61346378590
effective search space used: 61346378590
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)