Your job contains 1 sequence.
>048818
MKPPNRRFVVERPLILGALLTFAVTAAFLITGLSRTMKASIPRIYAIDSTPAAMQTQLLA
IIHYATSRDIPQLTLPEIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEED
SKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRYEKYCLPPHVHLKGNTRCKLVLNE
LPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARARKSRGVTHVFLHDVDRKVE
KAYAEEFLCRKYFVKVVGKLWHFRIPPGAYAIPGKGQRGISVFC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048818
(284 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010449 - symbol:AT1G27930 "AT1G27930" species... 701 3.8e-69 1
TAIR|locus:2019519 - symbol:AT1G67330 "AT1G67330" species... 673 3.6e-66 1
TAIR|locus:2013066 - symbol:AT1G71690 "AT1G71690" species... 511 5.2e-49 1
TAIR|locus:2012350 - symbol:GXM3 "glucuronoxylan methyltr... 470 1.2e-44 1
TAIR|locus:2140518 - symbol:GXM2 "glucuronoxylan methyltr... 462 8.1e-44 1
TAIR|locus:2012728 - symbol:GXMT1 "glucuronoxylan methylt... 459 1.7e-43 1
TAIR|locus:2047158 - symbol:AT2G15440 "AT2G15440" species... 405 8.9e-38 1
TAIR|locus:2074815 - symbol:IRX15 "AT3G50220" species:370... 398 4.9e-37 1
TAIR|locus:2155518 - symbol:IRX15-L "AT5G67210" species:3... 392 2.1e-36 1
TAIR|locus:2117378 - symbol:AT4G24910 "AT4G24910" species... 355 1.8e-32 1
>TAIR|locus:2010449 [details] [associations]
symbol:AT1G27930 "AT1G27930" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0005515
"protein binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006857 "oligopeptide transport" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] EMBL:CP002684 GO:GO:0005794 GO:GO:0005768
EMBL:AC069471 GO:GO:0005802 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 EMBL:AY050385 EMBL:AY124820
IPI:IPI00543539 PIR:F86404 RefSeq:NP_564297.1 UniGene:At.24903
ProteinModelPortal:Q9C7F9 PRIDE:Q9C7F9 EnsemblPlants:AT1G27930.1
GeneID:839686 KEGG:ath:AT1G27930 TAIR:At1g27930 InParanoid:Q9C7F9
OMA:APKGYFA PhylomeDB:Q9C7F9 ProtClustDB:CLSN2681974
Genevestigator:Q9C7F9 Uniprot:Q9C7F9
Length = 289
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 131/217 (60%), Positives = 157/217 (72%)
Query: 53 AMQTQLLAIIHYATSRDIPQLTLPEIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPRG 112
A QL AI+HYATS +PQ L EI + F+ L LAP N LVFGLG DSLMWASLNPRG
Sbjct: 60 ATPIQLQAIVHYATSNVVPQQNLAEISISFNILKKLAPANFLVFGLGRDSLMWASLNPRG 119
Query: 113 TTIFLEEDSKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRYEKYCLPPHVHLKGNT 172
T+FLEED + + +P LR H V YRT L +AD L+ SY+ E C P +L+GN
Sbjct: 120 KTLFLEEDLEWFQKVTKDSPFLRAHHVRYRTQLQQADSLLRSYKTEPKCFPAKSYLRGNE 179
Query: 173 RCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARARKSRGVTHVFL 232
+CKL L LPD+ Y+ EWD++ +D P+GY+AEAPGRMA IF+AAVMAR RK GVTHVFL
Sbjct: 180 KCKLALTGLPDEFYDTEWDLLMVDAPKGYFAEAPGRMAAIFSAAVMARNRKKPGVTHVFL 239
Query: 233 HDVDRKVEKAYAEEFLCRKYFVKVVGKLWHFRIPPGA 269
HDV+R+VEK +AEEFLCRKY V G+LWHF IPP A
Sbjct: 240 HDVNRRVEKTFAEEFLCRKYRVNAAGRLWHFAIPPAA 276
>TAIR|locus:2019519 [details] [associations]
symbol:AT1G67330 "AT1G67330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0010167 "response to nitrate" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0005768
GO:GO:0005802 EMBL:AC002130 HOGENOM:HOG000238795 InterPro:IPR021148
InterPro:IPR006514 Pfam:PF04669 TIGRFAMs:TIGR01627
ProtClustDB:CLSN2681974 EMBL:BT011227 EMBL:BT012155 EMBL:AK227306
IPI:IPI00539945 RefSeq:NP_176901.1 UniGene:At.22685 PaxDb:Q9FYG0
PRIDE:Q9FYG0 EnsemblPlants:AT1G67330.1 GeneID:843054
KEGG:ath:AT1G67330 TAIR:At1g67330 eggNOG:NOG289948
InParanoid:Q9FYG0 OMA:FANEFLC PhylomeDB:Q9FYG0
Genevestigator:Q9FYG0 Uniprot:Q9FYG0
Length = 291
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 131/247 (53%), Positives = 162/247 (65%)
Query: 33 LSRTMKASIPRIYAIDSTPAAMQTQLLAIIHYATSRDIPQLTLPEIRVPFDALLGLAPCN 92
L T K + I +TP QL +I+HYATS +PQ + EI + + L PCN
Sbjct: 47 LCSTAKNTAASIAKYTATPI----QLQSIVHYATSHTVPQQSFEEISISLNVLKERLPCN 102
Query: 93 LLVFGLGHDSLMWASLNPRGTTIFLEEDSKLVHTILARAPALRVHTVTYRTHLYEADHLM 152
LVFGLG DSLMWASLNP GTT+FLEED + + +L AP+LR H V YRTHL EA L+
Sbjct: 103 FLVFGLGRDSLMWASLNPGGTTVFLEEDPEWIEAVLKDAPSLRAHHVQYRTHLSEAGRLL 162
Query: 153 SSYRYEKYCLPPHVH-LKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMAT 211
S+Y+ E CLP ++ N +C L L LPD+ Y+ EWD+I +D P+GY+ EAPGRMA
Sbjct: 163 STYKNEPMCLPAKAFPIRYNEKCPLALTSLPDEFYDTEWDLIMVDAPKGYFPEAPGRMAA 222
Query: 212 IFTAAVMARARKSRGVTHVFLHDVDRKVEKAYAEEFLCRKYFVKVVGKLWHFRIPPGAYA 271
IF++A+MAR RK G THVFLHDV+RKVE A+A EFLC KY V VG+LWHF IP A
Sbjct: 223 IFSSAIMARNRKGDGTTHVFLHDVNRKVENAFANEFLCEKYKVNSVGRLWHFEIPNAANM 282
Query: 272 IPGKGQR 278
G R
Sbjct: 283 TDQPGDR 289
>TAIR|locus:2013066 [details] [associations]
symbol:AT1G71690 "AT1G71690" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC016163 UniGene:At.70348
HOGENOM:HOG000238795 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 EMBL:BT012133 EMBL:BT012405
EMBL:AK228612 IPI:IPI00539284 RefSeq:NP_565020.1 PaxDb:Q9C9J1
PRIDE:Q9C9J1 EnsemblPlants:AT1G71690.1 GeneID:843495
KEGG:ath:AT1G71690 TAIR:At1g71690 eggNOG:NOG272239
InParanoid:Q9C9J1 OMA:GMIARRR PhylomeDB:Q9C9J1
ProtClustDB:CLSN2917427 Genevestigator:Q9C9J1 Uniprot:Q9C9J1
Length = 295
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 103/217 (47%), Positives = 139/217 (64%)
Query: 60 AIIHYATSRDIPQLTLPEIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEE 119
A++HYA+S PQ TL EI V L +PCN LVFGLGHDSLMWA+LN G TIFL+E
Sbjct: 75 ALVHYASSNVTPQQTLSEISVTKKELEKKSPCNFLVFGLGHDSLMWATLNHGGRTIFLDE 134
Query: 120 DSKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRYEKYCLPPHVHLKGNTRCKLVLN 179
D +H I + P+L + V Y+T + +A+ LM++ + + C L+ +T C+L L
Sbjct: 135 DESWIHQIAEKFPSLESYHVRYKTKVRDAEALMAATKDREECRRVSTDLRVST-CELALK 193
Query: 180 ELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARARKSRG-VTHVFLHDVDRK 238
LP+ VY EWD+I +D P G++ EAPGRM+ I+TA ++AR RK T VF+HDVDRK
Sbjct: 194 GLPEVVYETEWDLIMVDAPTGFHEEAPGRMSAIYTAGMIARRRKDEEETTAVFVHDVDRK 253
Query: 239 VEKAYAEEFLCRKYFVKVVGKLWHFRIPPGA-YAIPG 274
VE ++ EFLCR Y K G+L HF +P Y + G
Sbjct: 254 VEDEFSMEFLCRDYMTKQEGRLRHFTVPSHRNYGVSG 290
>TAIR|locus:2012350 [details] [associations]
symbol:GXM3 "glucuronoxylan methyltransferase 3"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0030775 "glucuronoxylan 4-O-methyltransferase activity"
evidence=IDA] [GO:0045491 "xylan metabolic process" evidence=IMP]
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000139 EMBL:AC003970 EMBL:JX914594 EMBL:BT010727
EMBL:BT011658 IPI:IPI00523203 RefSeq:NP_172432.1 UniGene:At.10219
UniGene:At.66929 ProteinModelPortal:Q6NMK1
EnsemblPlants:AT1G09610.1 GeneID:837488 KEGG:ath:AT1G09610
TAIR:At1g09610 eggNOG:NOG295524 HOGENOM:HOG000238795
InParanoid:Q6NMK1 OMA:GPECTAI PhylomeDB:Q6NMK1
ProtClustDB:CLSN2679278 Genevestigator:Q6NMK1 GO:GO:0030775
GO:GO:0045491 InterPro:IPR021148 InterPro:IPR006514 Pfam:PF04669
TIGRFAMs:TIGR01627 Uniprot:Q6NMK1
Length = 282
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 100/210 (47%), Positives = 129/210 (61%)
Query: 60 AIIHYATSRDIPQLTLPEIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEE 119
A+IHY+TS PQ TL EI V L +PCN LVFGLGHDSLMW+SLN G T+FLEE
Sbjct: 63 ALIHYSTSVITPQQTLKEIAVSSRVLGKKSPCNFLVFGLGHDSLMWSSLNYGGRTVFLEE 122
Query: 120 DSKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRYEKYCLPPHVHLKGNTR---CKL 176
D + I R P L + VTY + + +AD+L+ + P G+ R C+L
Sbjct: 123 DEAWIKQIKRRFPMLESYHVTYDSKVNQADNLIEVGK------GPECTAIGDPRYSMCQL 176
Query: 177 VLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARARKSRGVTHVFLHDVD 236
L LP ++Y WD+I +D P GYY EAPGRM I+TA +MAR RK G T VF+HDV+
Sbjct: 177 ALKGLPAEIYETGWDLIMVDAPTGYYDEAPGRMTAIYTAGMMARNRKQGGETDVFVHDVN 236
Query: 237 RKVEKAYAEEFLCRKYFVKVVGKLWHFRIP 266
R++E +++ FLC Y K G+L HF IP
Sbjct: 237 REIEDKFSKAFLCEGYMKKQEGRLRHFIIP 266
>TAIR|locus:2140518 [details] [associations]
symbol:GXM2 "glucuronoxylan methyltransferase 2"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0010054 "trichoblast differentiation"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0030775 "glucuronoxylan 4-O-methyltransferase activity"
evidence=IDA] [GO:0045491 "xylan metabolic process" evidence=IMP]
GO:GO:0016021 GO:GO:0005794 GO:GO:0000139 EMBL:CP002687
EMBL:AL161516 EMBL:AL049481 HOGENOM:HOG000238795 GO:GO:0030775
GO:GO:0045491 InterPro:IPR021148 InterPro:IPR006514 Pfam:PF04669
TIGRFAMs:TIGR01627 EMBL:JX914595 EMBL:BT030090 IPI:IPI00521002
PIR:T04003 RefSeq:NP_192737.1 UniGene:At.33659
ProteinModelPortal:Q9T0F7 PRIDE:Q9T0F7 EnsemblPlants:AT4G09990.1
GeneID:826590 KEGG:ath:AT4G09990 TAIR:At4g09990 InParanoid:Q9T0F7
OMA:RTEDCKA PhylomeDB:Q9T0F7 ProtClustDB:CLSN2685653
Genevestigator:Q9T0F7 Uniprot:Q9T0F7
Length = 290
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 100/222 (45%), Positives = 131/222 (59%)
Query: 49 STP---AAMQTQLL-AIIHYATSRDIPQLTLPEIRVPFDALLGLAPCNLLVFGLGHDSLM 104
STP + T L A++HY TS PQ T E+ V L +PCN LVFGLGHDSLM
Sbjct: 53 STPQQCTKLPTSLSDALVHYVTSEITPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLM 112
Query: 105 WASLNPRGTTIFLEEDSKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRYEKYCLPP 164
WASLN G T+FLEED + T+ + P L + V Y T + +++ LM R E C
Sbjct: 113 WASLNHGGRTLFLEEDEAWIETVTKKFPNLESYHVVYDTKVKDSNKLMELKRTED-CKA- 170
Query: 165 HVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARARKS 224
V +++C L L P DVY +WDVI +D P GY+ EAPGRM+ I+TA ++AR R
Sbjct: 171 -VSDPRDSKCALSLKGFPADVYETQWDVIMVDAPTGYHDEAPGRMSAIYTAGLLARNRYD 229
Query: 225 RGVTHVFLHDVDRKVEKAYAEEFLCRKYFVKVVGKLWHFRIP 266
G T VF+HD++R VE ++ FLC Y + G+L HF IP
Sbjct: 230 GGETDVFVHDINRPVEDEFSVAFLCGGYMKEQQGRLRHFNIP 271
>TAIR|locus:2012728 [details] [associations]
symbol:GXMT1 "glucuronoxylan methyltransferase 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005976 "polysaccharide metabolic process" evidence=IDA]
[GO:0009808 "lignin metabolic process" evidence=IMP] [GO:0030775
"glucuronoxylan 4-O-methyltransferase activity" evidence=IDA]
[GO:0045491 "xylan metabolic process" evidence=IMP] GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794 GO:GO:0000139
GO:GO:0009808 EMBL:AC010164 eggNOG:NOG295524 HOGENOM:HOG000238795
GO:GO:0030775 GO:GO:0045491 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 ProtClustDB:CLSN2685653
EMBL:JX914596 EMBL:AY070772 EMBL:AY097395 EMBL:AY084664
IPI:IPI00530574 PIR:E86461 RefSeq:NP_564428.1 UniGene:At.28328
ProteinModelPortal:Q9LQ32 IntAct:Q9LQ32 PaxDb:Q9LQ32 PRIDE:Q9LQ32
EnsemblPlants:AT1G33800.1 GeneID:840272 KEGG:ath:AT1G33800
TAIR:At1g33800 InParanoid:Q9LQ32 OMA:MELGRSE PhylomeDB:Q9LQ32
Genevestigator:Q9LQ32 Uniprot:Q9LQ32
Length = 297
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 94/207 (45%), Positives = 127/207 (61%)
Query: 60 AIIHYATSRDIPQLTLPEIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEE 119
A++HY TS PQ T E+ V L +PCN LVFGLGHDSLMWASLN G T+F+EE
Sbjct: 76 ALVHYVTSNVTPQQTFDEVSVSKRVLDKKSPCNFLVFGLGHDSLMWASLNHGGRTLFIEE 135
Query: 120 DSKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRYEKYCLPPHVHLKGNTRCKLVLN 179
D + + + P L + V Y T + ++D LM R E+ C V N++C L L
Sbjct: 136 DQAWIAIVTKKFPNLESYHVVYDTKVKDSDKLMELGRSEE-CRS--VSDPRNSKCDLALK 192
Query: 180 ELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARARKSRGVTHVFLHDVDRKV 239
+ P D Y +WD+I +D P GY+ EAPGRM+ I+TA ++AR R+ G T VF+HDV+R V
Sbjct: 193 DFPADFYETKWDLIMVDAPTGYHEEAPGRMSAIYTAGLLARNRED-GETDVFVHDVNRPV 251
Query: 240 EKAYAEEFLCRKYFVKVVGKLWHFRIP 266
E ++ FLC+ Y + G+L HF IP
Sbjct: 252 EDEFSATFLCKGYMREQNGRLRHFTIP 278
>TAIR|locus:2047158 [details] [associations]
symbol:AT2G15440 "AT2G15440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC006920
HOGENOM:HOG000238795 InterPro:IPR021148 InterPro:IPR006514
Pfam:PF04669 TIGRFAMs:TIGR01627 ProtClustDB:CLSN2684394
EMBL:AY087196 EMBL:BT028994 IPI:IPI00534191 PIR:A84529
RefSeq:NP_565374.1 UniGene:At.64934 ProteinModelPortal:Q9SJN8
PaxDb:Q9SJN8 PRIDE:Q9SJN8 EnsemblPlants:AT2G15440.1 GeneID:816036
KEGG:ath:AT2G15440 TAIR:At2g15440 eggNOG:NOG322815
InParanoid:Q9SJN8 OMA:THESLLW PhylomeDB:Q9SJN8 ArrayExpress:Q9SJN8
Genevestigator:Q9SJN8 Uniprot:Q9SJN8
Length = 329
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 88/229 (38%), Positives = 138/229 (60%)
Query: 45 YAIDSTPAAMQTQ---LLAIIHYATSRDIPQLTLP--EIRVPFDALLGLAP-CNLLVFGL 98
+++ S+P++ L A++HY TS P ++ E+ + + P CNLL+FGL
Sbjct: 63 HSLSSSPSSSSLPPPVLAALLHY-TSSSPPNTSMSFLELSTISNIIHSHGPACNLLIFGL 121
Query: 99 GHDSLMWASLNPRGTTIFLEEDSKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRYE 158
H+SL+W S+N +G T+F++E V P + + V Y T + +A L+ Y+
Sbjct: 122 THESLLWRSINFQGRTVFVDESPYSVSKFEQSNPGVEAYEVVYSTKVSQAKKLLGYYKTR 181
Query: 159 KYCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVM 218
C P L + CKL +N+LP+ VY +WDVI IDGPRGY +++PGRMA IFT+AV+
Sbjct: 182 PECRPVQNLLFSD--CKLGINDLPNFVYEIDWDVILIDGPRGYASDSPGRMAPIFTSAVL 239
Query: 219 ARAR----KSRGVTHVFLHDVDRKVEKAYAEEFLCRKYFVKVVGKLWHF 263
A+++ K++ T V +H+ RK+E+ Y+EEFLC + ++VVG L HF
Sbjct: 240 AKSKDFGTKTKK-TDVLVHEFGRKIERVYSEEFLCEENLIEVVGDLGHF 287
>TAIR|locus:2074815 [details] [associations]
symbol:IRX15 "AT3G50220" species:3702 "Arabidopsis
thaliana" [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0009834
"secondary cell wall biogenesis" evidence=IMP] [GO:0045492 "xylan
biosynthetic process" evidence=RCA;IMP] [GO:0010413 "glucuronoxylan
metabolic process" evidence=RCA] GO:GO:0016021 GO:GO:0005794
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000139 GO:GO:0009834
EMBL:AL132976 GO:GO:0045492 HOGENOM:HOG000238795 InterPro:IPR021148
InterPro:IPR006514 Pfam:PF04669 TIGRFAMs:TIGR01627 EMBL:AK221924
EMBL:DQ446752 EMBL:DQ653142 EMBL:AY087437 IPI:IPI00535982
PIR:T45568 RefSeq:NP_190591.1 UniGene:At.1419
ProteinModelPortal:Q9SNE5 EnsemblPlants:AT3G50220.1 GeneID:824184
KEGG:ath:AT3G50220 TAIR:At3g50220 eggNOG:NOG249808
InParanoid:Q9SNE5 OMA:VERACSR PhylomeDB:Q9SNE5
ProtClustDB:CLSN2684394 Genevestigator:Q9SNE5 Uniprot:Q9SNE5
Length = 322
Score = 398 (145.2 bits), Expect = 4.9e-37, P = 4.9e-37
Identities = 99/249 (39%), Positives = 144/249 (57%)
Query: 30 ITGLSRTMKASIPRIYAIDSTPAA--------MQTQLL-AIIHYAT-SRDIPQLTLPEIR 79
I + ++ A++ + STP+A + T + A++HYA+ S D ++ E++
Sbjct: 52 IPSKNTSVAAAVAAVVTGGSTPSASSPISNSNLPTSAINALLHYASRSNDSFHMSYGEMK 111
Query: 80 VPFDALLGLAP-CNLLVFGLGHDSLMWASLNPRGTTIFLEEDSKLVHTILARAPALRVHT 138
D L AP CNLLVFGL H++L+W SLN G T+F+EE+ P + V
Sbjct: 112 SISDVLRRCAPPCNLLVFGLTHETLLWKSLNHNGRTVFIEENRYYAAYFEEIHPEIDVFD 171
Query: 139 VTYRTHLYEADHLMSSYRYE--KYCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFID 196
V Y T +EA L+++ + C P L + CKL LN+LP+ VY+ +WDVIF+D
Sbjct: 172 VQYTTKAHEAGELVTAAKEAAGNECRPVQNLLFSD--CKLGLNDLPNHVYDVDWDVIFVD 229
Query: 197 GPRGYYAEAPGRMATIFTAAVMARARKSRGV--THVFLHDVDRKVEKAYAEEFLCRKYFV 254
GPRG E PGRM++IFTAAV+AR++K G THVF+HD R VE+ +EFLCR+ V
Sbjct: 230 GPRGDAHEGPGRMSSIFTAAVLARSKKG-GTPKTHVFVHDYYRDVERLCGDEFLCRENLV 288
Query: 255 KVVGKLWHF 263
+ L H+
Sbjct: 289 ESNDLLAHY 297
>TAIR|locus:2155518 [details] [associations]
symbol:IRX15-L "AT5G67210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0009834 "secondary cell wall
biogenesis" evidence=IMP] [GO:0045492 "xylan biosynthetic process"
evidence=RCA;IMP] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] GO:GO:0016021 GO:GO:0005794 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000139 EMBL:AB020742 GO:GO:0009834
GO:GO:0045492 HOGENOM:HOG000238795 InterPro:IPR021148
InterPro:IPR006514 Pfam:PF04669 TIGRFAMs:TIGR01627
ProtClustDB:CLSN2684394 EMBL:BT003079 EMBL:AK227598 IPI:IPI00531113
RefSeq:NP_201522.1 UniGene:At.66656 UniGene:At.9615
ProteinModelPortal:Q9FH92 IntAct:Q9FH92 PRIDE:Q9FH92
EnsemblPlants:AT5G67210.1 GeneID:836856 KEGG:ath:AT5G67210
TAIR:At5g67210 eggNOG:NOG306344 InParanoid:Q9FH92 OMA:EAARNEC
PhylomeDB:Q9FH92 Genevestigator:Q9FH92 Uniprot:Q9FH92
Length = 317
Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 90/213 (42%), Positives = 127/213 (59%)
Query: 56 TQLLAIIHYAT-SRDIPQLTLPEIRVPFDALLGLAP-CNLLVFGLGHDSLMWASLNPRGT 113
T + A++HYA+ S D ++ E++ D L +P CNLLVFGL H++L+W SLN G
Sbjct: 80 TAINAMLHYASRSNDSYHMSYGEMKSISDVLRRCSPPCNLLVFGLTHETLLWKSLNHNGR 139
Query: 114 TIFLEEDSKLVHTILARAPALRVHTVTYRTHLYEADHLMSSYRY--EKYCLPPHVHLKGN 171
T+F+EE+ P + V V Y T EA L+S+ + C P L +
Sbjct: 140 TVFIEENRYYAAYFEEIHPEIEVFDVQYTTKAREARELVSAVKEAARNECRPVQNLLFSD 199
Query: 172 TRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARARKSRGV-THV 230
CKL LN+LP+ VY+ +WDVI +DGPRG + PGRM++IFTAAV+AR++K THV
Sbjct: 200 --CKLGLNDLPNHVYDVDWDVILVDGPRGDGGDVPGRMSSIFTAAVLARSKKGGNPKTHV 257
Query: 231 FLHDVDRKVEKAYAEEFLCRKYFVKVVGKLWHF 263
F+HD R VE+ +EFLCR+ V+ L H+
Sbjct: 258 FVHDYYRDVERLCGDEFLCRENLVESNDLLAHY 290
>TAIR|locus:2117378 [details] [associations]
symbol:AT4G24910 "AT4G24910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002687 EMBL:AL161562 EMBL:AL035523
InterPro:IPR021148 InterPro:IPR006514 Pfam:PF04669
TIGRFAMs:TIGR01627 EMBL:DQ446866 IPI:IPI00536243 PIR:T05512
RefSeq:NP_194221.1 UniGene:At.65420 ProteinModelPortal:Q9SW35
EnsemblPlants:AT4G24910.1 GeneID:828593 KEGG:ath:AT4G24910
TAIR:At4g24910 InParanoid:Q9SW35 OMA:INTRGIT PhylomeDB:Q9SW35
ProtClustDB:CLSN2685627 Genevestigator:Q9SW35 Uniprot:Q9SW35
Length = 315
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 78/194 (40%), Positives = 113/194 (58%)
Query: 77 EIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEEDSKLVHTILARA-PA-L 134
E+++ D + +PCN+LVFG LM +S+N RG T+ LE++ + A P
Sbjct: 105 ELKLLSDTVTRRSPCNILVFGFAPQYLMLSSINTRGITVILEDEPAKIMIPKAEVNPNNT 164
Query: 135 RVHTVTY-RTHLYEADHLMSSYRYEKYCLPP--HVHLKGNTRCKLVLNELPDDVYNREWD 191
R++++ Y + + A +L+ R C P + H +G++ CKL L +LP V+N +WD
Sbjct: 165 RIYSLKYHQMEVRNAYNLLQHARANPACAPNMNNQH-QGSSDCKLELRDLPQQVHNTKWD 223
Query: 192 VIFIDGPRGYYAEAPGRMATIFTAAVMARARKSRGVTHVFLHDVDRKVEKAYAEEFLCRK 251
VI +DGPRG E PGRM +I+TAAV+AR S T VF+HDV R EK + EFLC++
Sbjct: 224 VIVVDGPRGDDLETPGRMGSIYTAAVLARKGSSNSTTDVFVHDVHRTAEKWLSWEFLCQE 283
Query: 252 YFVKVVGKLWHFRI 265
V G W FRI
Sbjct: 284 NLVSAKGTFWKFRI 297
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.140 0.439 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 284 270 0.00097 114 3 11 22 0.41 33
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 613 (65 KB)
Total size of DFA: 207 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.60u 0.10s 21.70t Elapsed: 00:00:01
Total cpu time: 21.60u 0.10s 21.70t Elapsed: 00:00:01
Start: Tue May 21 05:52:32 2013 End: Tue May 21 05:52:33 2013