Query 048818
Match_columns 284
No_of_seqs 92 out of 94
Neff 3.2
Searched_HMMs 13730
Date Tue Mar 26 00:09:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048818.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048818hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1mjfa_ c.66.1.17 (A:) Putativ 92.3 0.16 1.2E-05 43.2 7.5 48 84-131 67-115 (276)
2 d2cl5a1 c.66.1.1 (A:3-216) Cat 91.4 0.28 2.1E-05 40.0 7.7 77 53-129 19-99 (214)
3 d1uira_ c.66.1.17 (A:) Spermid 89.4 1.1 7.7E-05 38.8 10.0 152 84-268 72-241 (312)
4 d1xj5a_ c.66.1.17 (A:) Spermid 88.8 0.26 1.9E-05 42.4 5.5 145 86-268 77-242 (290)
5 d2b2ca1 c.66.1.17 (A:3-314) Sp 87.6 0.57 4.1E-05 41.2 7.0 108 77-220 94-205 (312)
6 d1susa1 c.66.1.1 (A:21-247) Ca 87.2 2.2 0.00016 35.2 10.2 119 56-202 24-149 (227)
7 d2o07a1 c.66.1.17 (A:16-300) S 86.2 1.6 0.00012 37.2 9.1 149 84-268 73-238 (285)
8 d1ws6a1 c.66.1.46 (A:15-185) M 80.8 1.1 7.8E-05 34.9 5.2 77 74-153 24-102 (171)
9 d1inla_ c.66.1.17 (A:) Spermid 80.6 0.72 5.3E-05 39.9 4.4 48 84-131 84-133 (295)
10 d1iy9a_ c.66.1.17 (A:) Spermid 80.4 0.86 6.2E-05 38.7 4.8 48 84-131 70-119 (274)
11 d2avda1 c.66.1.1 (A:44-262) CO 66.4 29 0.0021 27.7 11.6 117 57-202 25-148 (219)
12 d2bm8a1 c.66.1.50 (A:2-233) Ce 62.3 6.2 0.00045 32.5 5.9 63 72-134 63-131 (232)
13 d1wy7a1 c.66.1.32 (A:4-204) Hy 49.1 21 0.0015 27.9 6.7 50 81-130 38-88 (201)
14 d1pjza_ c.66.1.36 (A:) Thiopur 48.3 8.9 0.00065 27.6 4.0 58 76-133 7-64 (201)
15 d2esra1 c.66.1.46 (A:28-179) P 45.9 9.8 0.00072 28.3 4.1 51 80-130 4-56 (152)
16 d2igta1 c.66.1.51 (A:1-309) Pu 44.4 13 0.00091 32.1 5.0 95 83-208 125-222 (309)
17 d1ixka_ c.66.1.38 (A:) Hypothe 43.8 11 0.0008 31.9 4.5 24 186-209 182-211 (313)
18 d1sqga2 c.66.1.38 (A:145-428) 43.7 7 0.00051 32.6 3.1 67 110-198 113-180 (284)
19 d1l3ia_ c.66.1.22 (A:) Precorr 40.8 42 0.0031 25.0 7.2 64 67-130 10-74 (186)
20 d1ihua1 c.37.1.10 (A:1-296) Ar 35.1 6.3 0.00046 30.9 1.4 26 97-122 18-47 (296)
21 d1hyqa_ c.37.1.10 (A:) Cell di 33.9 6.6 0.00048 29.7 1.3 17 187-203 107-123 (232)
22 d1ckea_ c.37.1.1 (A:) CMP kina 33.7 7.6 0.00056 28.8 1.6 11 192-202 5-15 (225)
23 d2bcgg1 c.3.1.3 (G:5-301) Guan 33.0 19 0.0014 25.0 3.6 25 187-221 3-27 (297)
24 d1g3qa_ c.37.1.10 (A:) Cell di 32.7 9.7 0.00071 28.6 2.1 16 188-203 110-125 (237)
25 d1d5ta1 c.3.1.3 (A:-2-291,A:38 30.3 23 0.0017 25.3 3.7 24 188-221 5-28 (336)
26 d2fhpa1 c.66.1.46 (A:1-182) Pu 28.5 20 0.0015 27.6 3.4 74 79-153 30-105 (182)
27 d2gzsa1 c.69.1.38 (A:41-305) E 28.0 14 0.001 28.1 2.3 35 75-109 220-256 (265)
28 d4ubpa_ d.8.1.1 (A:) Urease, g 26.1 11 0.00082 28.4 1.3 15 211-225 12-26 (100)
29 d1lssa_ c.2.1.9 (A:) Ktn Mja21 25.3 46 0.0034 23.5 4.7 40 92-131 2-43 (132)
30 d1rjda_ c.66.1.37 (A:) Leucine 24.6 14 0.001 31.6 1.9 39 85-123 92-131 (328)
31 d1e9ya2 d.8.1.1 (A:1-105) Urea 24.2 13 0.00094 28.3 1.3 16 211-226 12-27 (105)
32 d2b78a2 c.66.1.51 (A:69-385) H 22.2 34 0.0025 28.8 3.9 86 83-199 137-227 (317)
33 d2cqaa1 b.40.4.14 (A:8-89) Ruv 21.8 17 0.0013 26.3 1.6 21 180-200 42-69 (82)
34 d1yb2a1 c.66.1.13 (A:6-255) Hy 20.3 90 0.0065 25.3 6.1 58 73-130 69-129 (250)
35 d2oyra1 c.66.1.55 (A:1-250) Hy 20.2 31 0.0022 28.8 3.1 29 97-127 98-126 (250)
No 1
>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.35 E-value=0.16 Score=43.18 Aligned_cols=48 Identities=21% Similarity=0.215 Sum_probs=38.6
Q ss_pred HhccCCCCcEEEeccCchhhhhhhcCCCC-ceeEeccChhHHHHHhhhC
Q 048818 84 ALLGLAPCNLLVFGLGHDSLMWASLNPRG-TTIFLEEDSKLVHTILARA 131 (284)
Q Consensus 84 vL~~raPCNfLVFGLg~dslmW~aLN~gG-rTvFLEEd~~~i~~v~~~~ 131 (284)
.+....|-|.||.|+|--+..+..+.|+. +...+|=||.-|+-.++-+
T Consensus 67 l~~~~~p~~vLiiG~G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f 115 (276)
T d1mjfa_ 67 MLAHPKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI 115 (276)
T ss_dssp HHHSSCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT
T ss_pred hhcCCCCceEEEecCCchHHHHHHHHhCCceEEEecCCHHHHHHHHHhh
Confidence 34456799999999999999999998865 5567899999998776543
No 2
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=91.43 E-value=0.28 Score=39.97 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=57.4
Q ss_pred CcHHHHHHHHHHhhcCCCC-CCChhhhhcHHHHhccCCCCcEEEec--cCchhhhhh-hcCCCCceeEeccChhHHHHHh
Q 048818 53 AMQTQLLAIIHYATSRDIP-QLTLPEIRVPFDALLGLAPCNLLVFG--LGHDSLMWA-SLNPRGTTIFLEEDSKLVHTIL 128 (284)
Q Consensus 53 ~~~~~~~AlvHYAtsn~tp-qqt~~Ei~~~~~vL~~raPCNfLVFG--Lg~dslmW~-aLN~gGrTvFLEEd~~~i~~v~ 128 (284)
.+...++++=.||..+.-+ +.+.+.=+.+..+++..-|=++|-+| .|..++.|+ ++..||+-+=+|=++++++..+
T Consensus 19 ~p~~vl~~~~~~~~~~~~~m~i~~~~G~lL~~lv~~~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~ 98 (214)
T d2cl5a1 19 DPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQ 98 (214)
T ss_dssp CHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHH
Confidence 3445588888888865433 34555556778888888899999998 588777775 3567899999999999988765
Q ss_pred h
Q 048818 129 A 129 (284)
Q Consensus 129 ~ 129 (284)
+
T Consensus 99 ~ 99 (214)
T d2cl5a1 99 Q 99 (214)
T ss_dssp H
T ss_pred H
Confidence 3
No 3
>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}
Probab=89.42 E-value=1.1 Score=38.80 Aligned_cols=152 Identities=16% Similarity=0.224 Sum_probs=86.7
Q ss_pred HhccCCCCcEEEeccCchhhhhhhcCCC--CceeEeccChhHHHHHhhhCCCcee--E-EEeeecccccHHHHHHHcccC
Q 048818 84 ALLGLAPCNLLVFGLGHDSLMWASLNPR--GTTIFLEEDSKLVHTILARAPALRV--H-TVTYRTHLYEADHLMSSYRYE 158 (284)
Q Consensus 84 vL~~raPCNfLVFGLg~dslmW~aLN~g--GrTvFLEEd~~~i~~v~~~~p~lea--y-~V~Y~T~~~ea~~LL~~~r~~ 158 (284)
.+....|=|.||.|+|-.+.+...+.+. .+-.-+|=||.-|+-.++-+|.... + +=+-+--..||.+.|+..
T Consensus 72 l~~~~~pk~VLiiG~G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~--- 148 (312)
T d1uira_ 72 MLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT--- 148 (312)
T ss_dssp HHHSSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC---
T ss_pred hhhCCCcceEEEeCCCchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhc---
Confidence 3445568899999999999988888764 4778899999998877764432100 0 000011245666666521
Q ss_pred CCCCCCccCCCCcccccccccCCChhhhcccccEEEEeCCCCCCCCCCCchhhHhhHHH---HHHhhcCCCc--eeE--E
Q 048818 159 KYCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAV---MARARKSRGV--THV--F 231 (284)
Q Consensus 159 ~~C~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~Gy~peaPGRM~aIyTAav---mAR~r~~gg~--TdV--f 231 (284)
+.+||||++|.+.-+..+.|. ...||--. ++|.=+.||. +.+ .
T Consensus 149 ----------------------------~~~yDvIi~D~~dp~~~~~~~--~~L~t~eF~~~~~~~L~p~Gvlv~~~~s~ 198 (312)
T d1uira_ 149 ----------------------------EERYDVVIIDLTDPVGEDNPA--RLLYTVEFYRLVKAHLNPGGVMGMQTGMI 198 (312)
T ss_dssp ----------------------------CCCEEEEEEECCCCBSTTCGG--GGGSSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred ----------------------------CCcccEEEEeCCCcccccchh--hhhhhHHHHHHHHHhcCCCceEEEecCCc
Confidence 346999999997644444333 22555433 3333334442 222 1
Q ss_pred Ee---cCChHHHHHHHHhhccccc---hhhcccceeeEEeCCC
Q 048818 232 LH---DVDRKVEKAYAEEFLCRKY---FVKVVGKLWHFRIPPG 268 (284)
Q Consensus 232 VH---DvdR~VE~~~s~eFLC~~n---lv~~~grL~HF~Ip~~ 268 (284)
.. ++.+.+-+.+.+.|--=.. -|-+-|.-|.|.+-+.
T Consensus 199 ~~~~~~~~~~i~~tl~~~F~~V~~y~~~vPs~~~~w~f~~aS~ 241 (312)
T d1uira_ 199 LLTHHRVHPVVHRTVREAFRYVRSYKNHIPGFFLNFGFLLASD 241 (312)
T ss_dssp CC---CHHHHHHHHHHTTCSEEEEEEEEEGGGTEEEEEEEEES
T ss_pred ccchHHHHHHHHHHHHHhCceEEEEEeeeCCcCCCCEeEEEeC
Confidence 11 2334566677777732111 1223355688998553
No 4
>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=88.77 E-value=0.26 Score=42.44 Aligned_cols=145 Identities=14% Similarity=0.197 Sum_probs=88.8
Q ss_pred ccCCCCcEEEeccCchhhhhhhcCCCC--ceeEeccChhHHHHHhhhCCCcee--EEEeeecccccHHHHHHHcccCCCC
Q 048818 86 LGLAPCNLLVFGLGHDSLMWASLNPRG--TTIFLEEDSKLVHTILARAPALRV--HTVTYRTHLYEADHLMSSYRYEKYC 161 (284)
Q Consensus 86 ~~raPCNfLVFGLg~dslmW~aLN~gG--rTvFLEEd~~~i~~v~~~~p~lea--y~V~Y~T~~~ea~~LL~~~r~~~~C 161 (284)
....|=|.||.|+|-.+.+...+.|.+ +.+.+|=|+.-|+-.++-+|.... -+-+.+....||.+-++
T Consensus 77 ~~~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~-------- 148 (290)
T d1xj5a_ 77 SIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK-------- 148 (290)
T ss_dssp TSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH--------
T ss_pred hCCCCcceEEecCCchHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHh--------
Confidence 345688999999999999999998853 788999999999887765542210 01111222345555554
Q ss_pred CCCccCCCCcccccccccCCChhhhcccccEEEEeCCCCCCCCCCCchhhHhhHHHHHHhh---cCCCceeEEEe-----
Q 048818 162 LPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARAR---KSRGVTHVFLH----- 233 (284)
Q Consensus 162 ~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~Gy~peaPGRM~aIyTAavmAR~r---~~gg~TdVfVH----- 233 (284)
+.++ .++|||++|.+.++. |. ...||--....-+ +++| |||-
T Consensus 149 ------------------~~~~----~~yDvIi~D~~dp~~---~~--~~L~t~eF~~~~~~~L~~~G---i~v~q~~s~ 198 (290)
T d1xj5a_ 149 ------------------NAAE----GSYDAVIVDSSDPIG---PA--KELFEKPFFQSVARALRPGG---VVCTQAESL 198 (290)
T ss_dssp ------------------TSCT----TCEEEEEECCCCTTS---GG--GGGGSHHHHHHHHHHEEEEE---EEEEECCCT
T ss_pred ------------------hccc----cCccEEEEcCCCCCC---cc--hhhCCHHHHHHHHHhcCCCc---EEEEecCCc
Confidence 2222 369999999998543 22 5678865443333 3433 2221
Q ss_pred ----cCChHHHHHHHHhhc-cccch---hhc-ccceeeEEeCCC
Q 048818 234 ----DVDRKVEKAYAEEFL-CRKYF---VKV-VGKLWHFRIPPG 268 (284)
Q Consensus 234 ----DvdR~VE~~~s~eFL-C~~nl---v~~-~grL~HF~Ip~~ 268 (284)
+.-+.+-+.+.+.|- ...|. |-. .+-.|=|.+.+.
T Consensus 199 ~~~~~~~~~i~~~l~~vF~~~~~y~~~~vPty~~g~w~f~~as~ 242 (290)
T d1xj5a_ 199 WLHMDIIEDIVSNCREIFKGSVNYAWTSVPTYPSGVIGFMLCST 242 (290)
T ss_dssp TTCHHHHHHHHHHHHHHCSSCEEEEEEECTTSGGGEEEEEEEEC
T ss_pred HHHHHHHHHHHhhhhhhcccceeEeeEeeeeecCCceEEEEEeC
Confidence 222456677778884 44443 222 245888988443
No 5
>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=87.55 E-value=0.57 Score=41.17 Aligned_cols=108 Identities=14% Similarity=0.201 Sum_probs=64.1
Q ss_pred hhhcHHHHhccCCCCcEEEeccCchhhhhhhcCCC--CceeEeccChhHHHHHhhhCCCcee-E-EEeeecccccHHHHH
Q 048818 77 EIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPR--GTTIFLEEDSKLVHTILARAPALRV-H-TVTYRTHLYEADHLM 152 (284)
Q Consensus 77 Ei~~~~~vL~~raPCNfLVFGLg~dslmW~aLN~g--GrTvFLEEd~~~i~~v~~~~p~lea-y-~V~Y~T~~~ea~~LL 152 (284)
|.-+-.-.+....|=|.||.|+|--+.+...+.|. .+...+|=|+.-|+-.++-.|.... + +=+.+-...||.+-|
T Consensus 94 E~l~h~pl~~~~~pk~VLIiGgG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l 173 (312)
T d2b2ca1 94 EMLAHLPMFAHPDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFL 173 (312)
T ss_dssp HHHHHHHHHHSSSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHH
T ss_pred HHhhhHHHhcCCCCCeEEEeCCCchHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHH
Confidence 33333344556678899999999999999999986 5899999999999888776654321 0 011122245666666
Q ss_pred HHcccCCCCCCCccCCCCcccccccccCCChhhhcccccEEEEeCCCCCCCCCCCchhhHhhHHHHHH
Q 048818 153 SSYRYEKYCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVMAR 220 (284)
Q Consensus 153 ~~~r~~~~C~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~Gy~peaPGRM~aIyTAavmAR 220 (284)
+.. +.+||||++|.+.+..| | ...||---...
T Consensus 174 ~~~-------------------------------~~~yDvII~D~~dp~~~--~---~~L~t~eFy~~ 205 (312)
T d2b2ca1 174 KNH-------------------------------KNEFDVIITDSSDPVGP--A---ESLFGQSYYEL 205 (312)
T ss_dssp HHC-------------------------------TTCEEEEEECCC------------------HHHH
T ss_pred HhC-------------------------------CCCCCEEEEcCCCCCCc--c---hhhhhHHHHHH
Confidence 411 23599999999875432 2 34666544333
No 6
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=87.15 E-value=2.2 Score=35.20 Aligned_cols=119 Identities=14% Similarity=0.156 Sum_probs=75.7
Q ss_pred HHHHHHHHHhhcCCCCCC--ChhhhhcHHHHhccCCCCcEEEecc--Cchhhhhh-hcCCCCceeEeccChhHHHHHhhh
Q 048818 56 TQLLAIIHYATSRDIPQL--TLPEIRVPFDALLGLAPCNLLVFGL--GHDSLMWA-SLNPRGTTIFLEEDSKLVHTILAR 130 (284)
Q Consensus 56 ~~~~AlvHYAtsn~tpqq--t~~Ei~~~~~vL~~raPCNfLVFGL--g~dslmW~-aLN~gGrTvFLEEd~~~i~~v~~~ 130 (284)
..++.|..++..+.-|.| +..+-+.+..+++..-|=+.|-.|- |.-++.++ ++..+|+-+=+|-|+++++..++.
T Consensus 24 ~~l~~l~~~~~~~~~~~m~~~~~~g~~L~~L~~~~~~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~ 103 (227)
T d1susa1 24 EAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPV 103 (227)
T ss_dssp THHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHHTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcccccCHHHHHHHHHHHHhcCCCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHH
Confidence 346678888877766643 3444555666666667999999986 55555554 677799999999999998876643
Q ss_pred C--CCceeEEEeeecccccHHHHHHHcccCCCCCCCccCCCCcccccccccCCChhhhcccccEEEEeCCCCCC
Q 048818 131 A--PALRVHTVTYRTHLYEADHLMSSYRYEKYCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYY 202 (284)
Q Consensus 131 ~--p~leay~V~Y~T~~~ea~~LL~~~r~~~~C~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~Gy~ 202 (284)
. .+++ .+|. -...+|.+.|..+-. +...+-.+|+|+|||=++.+
T Consensus 104 ~~~~g~~-~~i~--~~~g~a~~~L~~l~~-------------------------~~~~~~~fD~iFiDa~k~~y 149 (227)
T d1susa1 104 IKKAGVD-HKID--FREGPALPVLDEMIK-------------------------DEKNHGSYDFIFVDADKDNY 149 (227)
T ss_dssp HHHTTCG-GGEE--EEESCHHHHHHHHHH-------------------------CGGGTTCBSEEEECSCSTTH
T ss_pred HHHhccc-ccee--eeehHHHHHHHHHHh-------------------------ccccCCceeEEEeccchhhh
Confidence 2 2222 1222 233566666653211 11234569999999977554
No 7
>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.16 E-value=1.6 Score=37.23 Aligned_cols=149 Identities=14% Similarity=0.199 Sum_probs=80.3
Q ss_pred HhccCCCCcEEEeccCchhhhhhhcCCC--CceeEeccChhHHHHHhhhCCCcee-E-EEeeecccccHHHHHHHcccCC
Q 048818 84 ALLGLAPCNLLVFGLGHDSLMWASLNPR--GTTIFLEEDSKLVHTILARAPALRV-H-TVTYRTHLYEADHLMSSYRYEK 159 (284)
Q Consensus 84 vL~~raPCNfLVFGLg~dslmW~aLN~g--GrTvFLEEd~~~i~~v~~~~p~lea-y-~V~Y~T~~~ea~~LL~~~r~~~ 159 (284)
.+....|=+.||.|+|-.+.+=..+.|. -+.+-+|=||.-++-.++-+|.... + +=+.+....||.+.|+.
T Consensus 73 l~~~~~pk~vLiiGgG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~----- 147 (285)
T d2o07a1 73 LCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQ----- 147 (285)
T ss_dssp HTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHT-----
T ss_pred hhhCcCcCeEEEeCCCchHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhc-----
Confidence 3444568899999999998888888773 4778899999998887765442110 0 01112234677777761
Q ss_pred CCCCCccCCCCcccccccccCCChhhhcccccEEEEeCCCCCCCCCCCchhhHhhHHHH---HHhhcCCCc--eeEEEec
Q 048818 160 YCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGRMATIFTAAVM---ARARKSRGV--THVFLHD 234 (284)
Q Consensus 160 ~C~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~Gy~peaPGRM~aIyTAavm---AR~r~~gg~--TdVfVHD 234 (284)
| +-++|||++|.+.+..+ | ...||---. .|.=+.+|. +..-..+
T Consensus 148 -~-------------------------~~~yDvIi~D~~~p~~~--~---~~L~t~eF~~~~~~~L~~~Gi~v~q~~s~~ 196 (285)
T d2o07a1 148 -N-------------------------QDAFDVIITDSSDPMGP--A---ESLFKESYYQLMKTALKEDGVLCCQGECQW 196 (285)
T ss_dssp -C-------------------------SSCEEEEEEECC----------------CHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred -C-------------------------CCCCCEEEEcCCCCCCc--c---cccccHHHHHHHHHhcCCCCeEEEeccchh
Confidence 0 12699999999886543 2 456664333 333234442 2222223
Q ss_pred CC----hHHHHHHHHhhccccc-h--hhc-ccceeeEEeCCC
Q 048818 235 VD----RKVEKAYAEEFLCRKY-F--VKV-VGKLWHFRIPPG 268 (284)
Q Consensus 235 vd----R~VE~~~s~eFLC~~n-l--v~~-~grL~HF~Ip~~ 268 (284)
.+ +.+-+.+.+.|-=-.. . +.. .|..|=|.+.+.
T Consensus 197 ~~~~~~~~~~~tl~~~F~~v~~y~~~vP~~~~g~w~f~~aSk 238 (285)
T d2o07a1 197 LHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFMLCSK 238 (285)
T ss_dssp TCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEEEES
T ss_pred hhHHHHHHHHHHHHhcCCeeeEEeeeeeecCCCCeEEEEEEC
Confidence 33 3445556666642111 1 112 267888888554
No 8
>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}
Probab=80.82 E-value=1.1 Score=34.89 Aligned_cols=77 Identities=12% Similarity=0.067 Sum_probs=51.4
Q ss_pred ChhhhhcHHHHhccC--CCCcEEEeccCchhhhhhhcCCCCceeEeccChhHHHHHhhhCCCceeEEEeeecccccHHHH
Q 048818 74 TLPEIRVPFDALLGL--APCNLLVFGLGHDSLMWASLNPRGTTIFLEEDSKLVHTILARAPALRVHTVTYRTHLYEADHL 151 (284)
Q Consensus 74 t~~Ei~~~~~vL~~r--aPCNfLVFGLg~dslmW~aLN~gGrTvFLEEd~~~i~~v~~~~p~leay~V~Y~T~~~ea~~L 151 (284)
|..--..+++.|+.+ ..+++|=.|=|.-.+--.++..|.+-+++|-|+..++.++++.-. +.+.-+....+++..
T Consensus 24 ~~~v~e~lf~~l~~~~~~g~~vLDl~~G~G~~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~---~~~~~~v~~~~~d~~ 100 (171)
T d1ws6a1 24 PVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRR---TGLGARVVALPVEVF 100 (171)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHH---HTCCCEEECSCHHHH
T ss_pred cHHHHHHHHHHhhccccCCCeEEEeccccchhhhhhhhccchhhhcccCHHHHhhhhHHHHh---hccccceeeeehhcc
Confidence 333345677788763 367888777777677677888899999999999999988765221 122223344566665
Q ss_pred HH
Q 048818 152 MS 153 (284)
Q Consensus 152 L~ 153 (284)
+.
T Consensus 101 ~~ 102 (171)
T d1ws6a1 101 LP 102 (171)
T ss_dssp HH
T ss_pred cc
Confidence 54
No 9
>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}
Probab=80.60 E-value=0.72 Score=39.92 Aligned_cols=48 Identities=19% Similarity=0.270 Sum_probs=38.0
Q ss_pred HhccCCCCcEEEeccCchhhhhhhcCCCC--ceeEeccChhHHHHHhhhC
Q 048818 84 ALLGLAPCNLLVFGLGHDSLMWASLNPRG--TTIFLEEDSKLVHTILARA 131 (284)
Q Consensus 84 vL~~raPCNfLVFGLg~dslmW~aLN~gG--rTvFLEEd~~~i~~v~~~~ 131 (284)
++....|=|.||.|+|-...+-..+.|.+ +.+.+|=||.-|+-.++-.
T Consensus 84 l~~~~~pk~VLiiGgG~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~ 133 (295)
T d1inla_ 84 MFLHPNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYL 133 (295)
T ss_dssp HHHSSSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHC
T ss_pred HhhCCCCceEEEecCCchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHH
Confidence 34456799999999999999988888854 4667899999888766543
No 10
>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}
Probab=80.36 E-value=0.86 Score=38.69 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=37.6
Q ss_pred HhccCCCCcEEEeccCchhhhhhhcCCC--CceeEeccChhHHHHHhhhC
Q 048818 84 ALLGLAPCNLLVFGLGHDSLMWASLNPR--GTTIFLEEDSKLVHTILARA 131 (284)
Q Consensus 84 vL~~raPCNfLVFGLg~dslmW~aLN~g--GrTvFLEEd~~~i~~v~~~~ 131 (284)
.+....|=|.||.|+|-.+.+=..+.|. .+...+|=||.-++-.++-+
T Consensus 70 l~~~~~p~~vLiiGgG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~ 119 (274)
T d1iy9a_ 70 LFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFL 119 (274)
T ss_dssp HHHSSSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHC
T ss_pred hhccCCcceEEecCCCCcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhC
Confidence 4445568899999999999887778764 36778999999988776644
No 11
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.42 E-value=29 Score=27.72 Aligned_cols=117 Identities=12% Similarity=0.014 Sum_probs=72.9
Q ss_pred HHHHHHHHhhcCCCC--CCChhhhhcHHHHhccCCCCcEEEeccCch-hhhhh--hcCCCCceeEeccChhHHHHHhhhC
Q 048818 57 QLLAIIHYATSRDIP--QLTLPEIRVPFDALLGLAPCNLLVFGLGHD-SLMWA--SLNPRGTTIFLEEDSKLVHTILARA 131 (284)
Q Consensus 57 ~~~AlvHYAtsn~tp--qqt~~Ei~~~~~vL~~raPCNfLVFGLg~d-slmW~--aLN~gGrTvFLEEd~~~i~~v~~~~ 131 (284)
.++.|-.++..+..+ +.+.++-+.+..+++..-|=|.|-.|-+.- |.+|- ++..+|+-+=+|-|+.+++..++..
T Consensus 25 ~l~~l~~~t~~~~~~~~~i~~~~g~lL~~L~~~~~~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~ 104 (219)
T d2avda1 25 ALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLW 104 (219)
T ss_dssp HHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHccCCCeEEEEechhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHH
Confidence 466677777655443 456666555665556667999999987543 44554 4456899888999999988776542
Q ss_pred --CCceeEEEeeecccccHHHHHHHcccCCCCCCCccCCCCcccccccccCCChhhhcccccEEEEeCCCCCC
Q 048818 132 --PALRVHTVTYRTHLYEADHLMSSYRYEKYCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYY 202 (284)
Q Consensus 132 --p~leay~V~Y~T~~~ea~~LL~~~r~~~~C~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~Gy~ 202 (284)
-+++. +.+-...+|.+.|...-.+. .+-.+|+|.+|+-+...
T Consensus 105 ~~ag~~~---~i~~~~Gda~e~l~~~~~~~--------------------------~~~~fD~ifiD~dk~~y 148 (219)
T d2avda1 105 RQAEAEH---KIDLRLKPALETLDELLAAG--------------------------EAGTFDVAVVDADKENC 148 (219)
T ss_dssp HHTTCTT---TEEEEESCHHHHHHHHHHTT--------------------------CTTCEEEEEECSCSTTH
T ss_pred HhcCccc---eEEEEEeehhhcchhhhhhc--------------------------ccCCccEEEEeCCHHHH
Confidence 22221 12234566666665332110 12258999999887554
No 12
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI {Streptomyces clavuligerus [TaxId: 1901]}
Probab=62.29 E-value=6.2 Score=32.51 Aligned_cols=63 Identities=14% Similarity=0.133 Sum_probs=47.1
Q ss_pred CCChhhhhcHHHHhccCCCCcEEEecc--Cchhhhhh----hcCCCCceeEeccChhHHHHHhhhCCCc
Q 048818 72 QLTLPEIRVPFDALLGLAPCNLLVFGL--GHDSLMWA----SLNPRGTTIFLEEDSKLVHTILARAPAL 134 (284)
Q Consensus 72 qqt~~Ei~~~~~vL~~raPCNfLVFGL--g~dslmW~----aLN~gGrTvFLEEd~~~i~~v~~~~p~l 134 (284)
.|+..++.+...+|.+.-|=++|=.|. |...++|+ ++|..|+-+.+|-|+.+........+.+
T Consensus 63 ~k~p~d~~~~~eli~~~KPk~ILEIGv~~GgS~~~~a~~l~~~~~~~kI~giDId~~~~~~~~~~~~~I 131 (232)
T d2bm8a1 63 LKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENI 131 (232)
T ss_dssp CSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTE
T ss_pred ccCHHHHHHHHHHHHHhCCCEEEEECCCCchHHHHHHHHHHhcCCCceEEecCcChhhhhhhhccccce
Confidence 688999999999999988999999998 44445555 3467899999998876654433444443
No 13
>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=49.12 E-value=21 Score=27.92 Aligned_cols=50 Identities=18% Similarity=0.187 Sum_probs=36.6
Q ss_pred HHHHhccCCCCcEEEeccCchhhhhhhcCCCC-ceeEeccChhHHHHHhhh
Q 048818 81 PFDALLGLAPCNLLVFGLGHDSLMWASLNPRG-TTIFLEEDSKLVHTILAR 130 (284)
Q Consensus 81 ~~~vL~~raPCNfLVFGLg~dslmW~aLN~gG-rTvFLEEd~~~i~~v~~~ 130 (284)
++..+....--++|=.|-|--.+.-.++..|+ +.+.+|-|+..++..+++
T Consensus 38 ~~~~~~dl~g~~vLDlg~GtG~l~i~a~~~g~~~v~~vdi~~~~~~~a~~N 88 (201)
T d1wy7a1 38 LAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIEN 88 (201)
T ss_dssp HHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHH
T ss_pred HHHhcCCCCCCEEEECcCcchHHHHHHHHcCCCEEEEEcCcHHHHHHHHHH
Confidence 33444434456888888888877666666665 678999999999988875
No 14
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}
Probab=48.27 E-value=8.9 Score=27.58 Aligned_cols=58 Identities=12% Similarity=-0.010 Sum_probs=46.7
Q ss_pred hhhhcHHHHhccCCCCcEEEeccCchhhhhhhcCCCCceeEeccChhHHHHHhhhCCC
Q 048818 76 PEIRVPFDALLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEEDSKLVHTILARAPA 133 (284)
Q Consensus 76 ~Ei~~~~~vL~~raPCNfLVFGLg~dslmW~aLN~gGrTvFLEEd~~~i~~v~~~~p~ 133 (284)
++++.....|.-..+..+|..|=|.-..++.-.++|.+.+=+|=++..|++.+++.+.
T Consensus 7 ~~~~~~~~~l~~~~~~rvLd~GCG~G~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~ 64 (201)
T d1pjza_ 7 KDLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGE 64 (201)
T ss_dssp HHHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred HHHHHHHHHcCCCCCCEEEEecCcCCHHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence 5677778888888899999997665555555556899999999999999999987654
No 15
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}
Probab=45.93 E-value=9.8 Score=28.29 Aligned_cols=51 Identities=14% Similarity=0.164 Sum_probs=39.2
Q ss_pred cHHHHhccC-CCCcEEEeccCchhhhhhhcCCC-CceeEeccChhHHHHHhhh
Q 048818 80 VPFDALLGL-APCNLLVFGLGHDSLMWASLNPR-GTTIFLEEDSKLVHTILAR 130 (284)
Q Consensus 80 ~~~~vL~~r-aPCNfLVFGLg~dslmW~aLN~g-GrTvFLEEd~~~i~~v~~~ 130 (284)
.++++|+.. .-+++|=.|=|-.++--.++-.| .+.+|+|-|+..++.+++.
T Consensus 4 ~~fn~l~~~~~g~~vlDl~~GtG~~~iea~~rga~~v~~ve~~~~a~~~~~~n 56 (152)
T d2esra1 4 AIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDN 56 (152)
T ss_dssp HHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHhhCCCCeEEEcCCccCHHHHHHHHhCcceeeeehhchhhhhhhhhh
Confidence 467788875 48899988777777776666665 3789999999999887754
No 16
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=44.37 E-value=13 Score=32.10 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=57.5
Q ss_pred HHhccCC-CCcEEEeccCchhhhhhhcCCCCceeEeccChhHHHHHhhh--CCCceeEEEeeecccccHHHHHHHcccCC
Q 048818 83 DALLGLA-PCNLLVFGLGHDSLMWASLNPRGTTIFLEEDSKLVHTILAR--APALRVHTVTYRTHLYEADHLMSSYRYEK 159 (284)
Q Consensus 83 ~vL~~ra-PCNfLVFGLg~dslmW~aLN~gGrTvFLEEd~~~i~~v~~~--~p~leay~V~Y~T~~~ea~~LL~~~r~~~ 159 (284)
+.++..+ +.++|=.+=|.-..--.+...|...+.+|-++..++..+++ .++++.-.++|- ..|+.+.|+....
T Consensus 125 ~~~~~~~~~~rVLdlf~~tG~~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i--~~D~~~~l~~~~~-- 200 (309)
T d2igta1 125 NAVETADRPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWI--CEDAMKFIQREER-- 200 (309)
T ss_dssp HHHHHSSSCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEE--CSCHHHHHHHHHH--
T ss_pred HHHhhccCCCeEEEecCCCcHHHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEE--eCCHHHhHHHHhh--
Confidence 3444444 88988664444444444555677999999999999988864 234443223332 3567777663321
Q ss_pred CCCCCccCCCCcccccccccCCChhhhcccccEEEEeCCCCCCCCCCCc
Q 048818 160 YCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPRGYYAEAPGR 208 (284)
Q Consensus 160 ~C~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~Gy~peaPGR 208 (284)
-...+|+|++|-|+ |.+...|.
T Consensus 201 --------------------------~~~~fD~IilDPP~-f~~~~~~~ 222 (309)
T d2igta1 201 --------------------------RGSTYDIILTDPPK-FGRGTHGE 222 (309)
T ss_dssp --------------------------HTCCBSEEEECCCS-EEECTTCC
T ss_pred --------------------------cCCCCCEEEECCCc-ccccccch
Confidence 11368999999885 33333343
No 17
>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=43.84 E-value=11 Score=31.91 Aligned_cols=24 Identities=33% Similarity=0.473 Sum_probs=12.5
Q ss_pred hcccccEEEEeCC-CCC-----CCCCCCch
Q 048818 186 YNREWDVIFIDGP-RGY-----YAEAPGRM 209 (284)
Q Consensus 186 Ye~eWDvImVDgP-~Gy-----~peaPGRM 209 (284)
++-+.|.|+||+| +|- .|+..-++
T Consensus 182 ~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~ 211 (313)
T d1ixka_ 182 LNVEFDKILLDAPCTGSGTIHKNPERKWNR 211 (313)
T ss_dssp GCCCEEEEEEECCTTSTTTCC--------C
T ss_pred ccccccEEEEccccccCCceeeccchhhhh
Confidence 4557899999999 333 35554443
No 18
>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=43.68 E-value=7 Score=32.60 Aligned_cols=67 Identities=21% Similarity=0.245 Sum_probs=0.0
Q ss_pred CCCceeEeccChhHHHHHhhhCCCceeEEEeee-cccccHHHHHHHcccCCCCCCCccCCCCcccccccccCCChhhhcc
Q 048818 110 PRGTTIFLEEDSKLVHTILARAPALRVHTVTYR-THLYEADHLMSSYRYEKYCLPPHVHLKGNTRCKLVLNELPDDVYNR 188 (284)
Q Consensus 110 ~gGrTvFLEEd~~~i~~v~~~~p~leay~V~Y~-T~~~ea~~LL~~~r~~~~C~p~~~~lr~~S~CkLAL~~LP~evYe~ 188 (284)
|||+|. ++.....+-+.+-+.-+ .+++...+.++.+.-+....-..+ . ..++...+-
T Consensus 113 PGgKt~----------~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~--~----------~~~~~~~~~ 170 (284)
T d1sqga2 113 PGGKTT----------HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG--R----------YPSQWCGEQ 170 (284)
T ss_dssp TCHHHH----------HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT--T----------CTHHHHTTC
T ss_pred cccchh----------hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc--c----------ccchhcccc
Q ss_pred cccEEEEeCC
Q 048818 189 EWDVIFIDGP 198 (284)
Q Consensus 189 eWDvImVDgP 198 (284)
.+|.|+||+|
T Consensus 171 ~fd~IL~DaP 180 (284)
T d1sqga2 171 QFDRILLDAP 180 (284)
T ss_dssp CEEEEEEECC
T ss_pred cccEEEEecc
No 19
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=40.75 E-value=42 Score=25.03 Aligned_cols=64 Identities=11% Similarity=0.036 Sum_probs=45.2
Q ss_pred cCCCCCCChhhhhc-HHHHhccCCCCcEEEeccCchhhhhhhcCCCCceeEeccChhHHHHHhhh
Q 048818 67 SRDIPQLTLPEIRV-PFDALLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEEDSKLVHTILAR 130 (284)
Q Consensus 67 sn~tpqqt~~Ei~~-~~~vL~~raPCNfLVFGLg~dslmW~aLN~gGrTvFLEEd~~~i~~v~~~ 130 (284)
....|++|.+||+. +...|+-+.-..+|=+|-|.-.+.-.....+++-+-+|=|+..++..+++
T Consensus 10 ~~~~~~~t~~eir~~il~~l~~~~g~~VLDiGcGsG~~s~~lA~~~~~V~avD~~~~~l~~a~~n 74 (186)
T d1l3ia_ 10 NPSVPGPTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMN 74 (186)
T ss_dssp CTTSCCCCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCCChHHHHHHHHHhcCCCCCCEEEEEECCeEcccccccccceEEEEecCCHHHHHHHHHH
Confidence 34568899999954 55555555566677676666544334455678888899999999988864
No 20
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=35.06 E-value=6.3 Score=30.92 Aligned_cols=26 Identities=15% Similarity=0.257 Sum_probs=18.0
Q ss_pred ccCchh----hhhhhcCCCCceeEeccChh
Q 048818 97 GLGHDS----LMWASLNPRGTTIFLEEDSK 122 (284)
Q Consensus 97 GLg~ds----lmW~aLN~gGrTvFLEEd~~ 122 (284)
|.|.-+ +-.+.-+.|-||+-+|-||.
T Consensus 18 GVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~ 47 (296)
T d1ihua1 18 GVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (296)
T ss_dssp TSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred cChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 566655 44555567889999998874
No 21
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=33.93 E-value=6.6 Score=29.70 Aligned_cols=17 Identities=24% Similarity=0.507 Sum_probs=14.0
Q ss_pred cccccEEEEeCCCCCCC
Q 048818 187 NREWDVIFIDGPRGYYA 203 (284)
Q Consensus 187 e~eWDvImVDgP~Gy~p 203 (284)
...+|+|+||.|.|+.+
T Consensus 107 ~~~~D~viiD~~~~~~~ 123 (232)
T d1hyqa_ 107 MESTDILLLDAPAGLER 123 (232)
T ss_dssp HHTCSEEEEECCSSSSH
T ss_pred hhccceeeecccccccc
Confidence 45799999999998754
No 22
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=33.70 E-value=7.6 Score=28.80 Aligned_cols=11 Identities=64% Similarity=0.857 Sum_probs=9.2
Q ss_pred EEEEeCCCCCC
Q 048818 192 VIFIDGPRGYY 202 (284)
Q Consensus 192 vImVDgP~Gy~ 202 (284)
||.||||.|=.
T Consensus 5 iI~I~GppGSG 15 (225)
T d1ckea_ 5 VITIDGPSGAG 15 (225)
T ss_dssp EEEEECCTTSS
T ss_pred EEEEECCCCCC
Confidence 89999998754
No 23
>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.99 E-value=19 Score=25.01 Aligned_cols=25 Identities=12% Similarity=0.380 Sum_probs=20.4
Q ss_pred cccccEEEEeCCCCCCCCCCCchhhHhhHHHHHHh
Q 048818 187 NREWDVIFIDGPRGYYAEAPGRMATIFTAAVMARA 221 (284)
Q Consensus 187 e~eWDvImVDgP~Gy~peaPGRM~aIyTAavmAR~ 221 (284)
+.++|||+|=| =|+++-+|..|||+
T Consensus 3 ~~~yDviViGa----------G~~Gl~~A~~La~~ 27 (297)
T d2bcgg1 3 DTDYDVIVLGT----------GITECILSGLLSVD 27 (297)
T ss_dssp CCBCSEEEECC----------SHHHHHHHHHHHHT
T ss_pred CCcCCEEEECc----------CHHHHHHHHHHHHC
Confidence 56899999952 25899999999986
No 24
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=32.65 E-value=9.7 Score=28.61 Aligned_cols=16 Identities=38% Similarity=0.681 Sum_probs=13.1
Q ss_pred ccccEEEEeCCCCCCC
Q 048818 188 REWDVIFIDGPRGYYA 203 (284)
Q Consensus 188 ~eWDvImVDgP~Gy~p 203 (284)
-.+|+|+||.|.|..+
T Consensus 110 ~~~d~IiiD~~~~~~~ 125 (237)
T d1g3qa_ 110 DKFDFILIDCPAGLQL 125 (237)
T ss_dssp GGCSEEEEECCSSSSH
T ss_pred hcCCEEEEcccccccc
Confidence 4689999999988643
No 25
>d1d5ta1 c.3.1.3 (A:-2-291,A:389-431) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]}
Probab=30.33 E-value=23 Score=25.34 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=18.6
Q ss_pred ccccEEEEeCCCCCCCCCCCchhhHhhHHHHHHh
Q 048818 188 REWDVIFIDGPRGYYAEAPGRMATIFTAAVMARA 221 (284)
Q Consensus 188 ~eWDvImVDgP~Gy~peaPGRM~aIyTAavmAR~ 221 (284)
-+||||+|= -.+ +++-+|.-||++
T Consensus 5 ~~yDvvIIG----aG~------aGl~aA~~Lak~ 28 (336)
T d1d5ta1 5 EEYDVIVLG----TGL------TECILSGIMSVN 28 (336)
T ss_dssp SBCSEEEEC----CSH------HHHHHHHHHHHT
T ss_pred CcCCEEEEC----CCH------HHHHHHHHHHHC
Confidence 469999993 333 888889999886
No 26
>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}
Probab=28.45 E-value=20 Score=27.59 Aligned_cols=74 Identities=11% Similarity=0.107 Sum_probs=48.8
Q ss_pred hcHHHHhccC-CCCcEEEeccCchhhhhhhcCCCCc-eeEeccChhHHHHHhhhCCCceeEEEeeecccccHHHHHH
Q 048818 79 RVPFDALLGL-APCNLLVFGLGHDSLMWASLNPRGT-TIFLEEDSKLVHTILARAPALRVHTVTYRTHLYEADHLMS 153 (284)
Q Consensus 79 ~~~~~vL~~r-aPCNfLVFGLg~dslmW~aLN~gGr-TvFLEEd~~~i~~v~~~~p~leay~V~Y~T~~~ea~~LL~ 153 (284)
..++++|... .-+++|=.+=|--++-..++..|.. .+|+|-|+..++.++++.-.+.. .-++.....++.+.|+
T Consensus 30 ealFn~l~~~~~~~~vLDlfaGsG~~g~ea~srGa~~v~~ve~~~~a~~~~~~N~~~~~~-~~~~~i~~~D~~~~l~ 105 (182)
T d2fhpa1 30 ESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKE-PEKFEVRKMDANRALE 105 (182)
T ss_dssp HHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTC-GGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEcccccccccceeeecchhHHHHHHHHHHHHHHHHHHhhhhhc-ccccccccccchhhhh
Confidence 3566777764 3688887777888888888888874 89999999999888764321110 0023334456666665
No 27
>d2gzsa1 c.69.1.38 (A:41-305) Enterobactin and salmochelin hydrolase IroE {Escherichia coli [TaxId: 562]}
Probab=28.02 E-value=14 Score=28.10 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=28.8
Q ss_pred hhhhhcHHHHhccCC-CCcEEEe-ccCchhhhhhhcC
Q 048818 75 LPEIRVPFDALLGLA-PCNLLVF-GLGHDSLMWASLN 109 (284)
Q Consensus 75 ~~Ei~~~~~vL~~ra-PCNfLVF-GLg~dslmW~aLN 109 (284)
.++.....+.|+++. ++.+.+| |-||.+..|+|+.
T Consensus 220 ~~~~~~l~~~L~~~g~~~~~~~~pG~~Hg~~~~~s~~ 256 (265)
T d2gzsa1 220 LSKIHTTLTILKDKGVNAVFWDFPNLGHGPMFNASFR 256 (265)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEcCCCCcchHHHHHHH
Confidence 345666788888877 9999999 9999999888874
No 28
>d4ubpa_ d.8.1.1 (A:) Urease, gamma-subunit {Bacillus pasteurii [TaxId: 1474]}
Probab=26.09 E-value=11 Score=28.45 Aligned_cols=15 Identities=40% Similarity=0.530 Sum_probs=12.8
Q ss_pred hHhhHHHHHHhhcCC
Q 048818 211 TIFTAAVMARARKSR 225 (284)
Q Consensus 211 aIyTAavmAR~r~~g 225 (284)
-||+||.+||.|+.-
T Consensus 12 ~i~~aa~lA~~R~aR 26 (100)
T d4ubpa_ 12 QIFLASELLLRRKAR 26 (100)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHc
Confidence 489999999999843
No 29
>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=25.29 E-value=46 Score=23.45 Aligned_cols=40 Identities=18% Similarity=0.331 Sum_probs=30.6
Q ss_pred cEEEeccCchhhhhh-hcC-CCCceeEeccChhHHHHHhhhC
Q 048818 92 NLLVFGLGHDSLMWA-SLN-PRGTTIFLEEDSKLVHTILARA 131 (284)
Q Consensus 92 NfLVFGLg~dslmW~-aLN-~gGrTvFLEEd~~~i~~v~~~~ 131 (284)
+.+|+|.|+-...-+ .|. .|=.-+.+|.|++.++++..+.
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~ 43 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI 43 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh
Confidence 478999998765554 444 3447889999999999987764
No 30
>d1rjda_ c.66.1.37 (A:) Leucine carboxy methyltransferase Ppm1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.58 E-value=14 Score=31.60 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=30.8
Q ss_pred hccCCCCcEEEeccCchhhhhhhcCCCCceeEeccC-hhH
Q 048818 85 LLGLAPCNLLVFGLGHDSLMWASLNPRGTTIFLEED-SKL 123 (284)
Q Consensus 85 L~~raPCNfLVFGLg~dslmW~aLN~gGrTvFLEEd-~~~ 123 (284)
|+...+|.++..|=|.|+..|.-++..++..|.|=| |+-
T Consensus 92 l~~~~~~QVV~LGaG~DTr~~Rl~~~~~~~~~~EvD~p~v 131 (328)
T d1rjda_ 92 LVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNES 131 (328)
T ss_dssp HHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHH
T ss_pred HHHCCCcEEEEeCCccchHHHHhhccCCCcEEEECCcHHH
Confidence 445568999999999999999988766677788844 443
No 31
>d1e9ya2 d.8.1.1 (A:1-105) Urease, gamma-subunit {Helicobacter pylori [TaxId: 210]}
Probab=24.17 E-value=13 Score=28.32 Aligned_cols=16 Identities=31% Similarity=0.544 Sum_probs=13.3
Q ss_pred hHhhHHHHHHhhcCCC
Q 048818 211 TIFTAAVMARARKSRG 226 (284)
Q Consensus 211 aIyTAavmAR~r~~gg 226 (284)
-||+||.+||.|+.-|
T Consensus 12 ~i~~aa~lA~~R~aRG 27 (105)
T d1e9ya2 12 MLHYAGELAKKRKEKG 27 (105)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcc
Confidence 5999999999998433
No 32
>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}
Probab=22.19 E-value=34 Score=28.78 Aligned_cols=86 Identities=17% Similarity=0.128 Sum_probs=50.0
Q ss_pred HHhccCC-CCcEEEe--ccCchhhhhhhcCCCCceeEeccChhHHHHHhhhC--CCceeEEEeeecccccHHHHHHHccc
Q 048818 83 DALLGLA-PCNLLVF--GLGHDSLMWASLNPRGTTIFLEEDSKLVHTILARA--PALRVHTVTYRTHLYEADHLMSSYRY 157 (284)
Q Consensus 83 ~vL~~ra-PCNfLVF--GLg~dslmW~aLN~gGrTvFLEEd~~~i~~v~~~~--p~leay~V~Y~T~~~ea~~LL~~~r~ 157 (284)
.+++..+ .-++|=. |-|.=| +.++.+-...++.+|-|+..++..+++. ++++.-.+ +.-..++.+.|+.++.
T Consensus 137 ~l~~~~~~g~~VLdlf~~~G~~s-l~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~--~~i~~d~~~~l~~~~~ 213 (317)
T d2b78a2 137 ELINGSAAGKTVLNLFSYTAAFS-VAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANH--QLVVMDVFDYFKYARR 213 (317)
T ss_dssp HHHHTTTBTCEEEEETCTTTHHH-HHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTE--EEEESCHHHHHHHHHH
T ss_pred HHHHHhhCCCceeecCCCCcHHH-HHHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcce--EEEEccHHHHHHHHHh
Confidence 3445444 4567644 444444 4555543446899999999999888653 34432111 1223566666653332
Q ss_pred CCCCCCCccCCCCcccccccccCCChhhhcccccEEEEeCCC
Q 048818 158 EKYCLPPHVHLKGNTRCKLVLNELPDDVYNREWDVIFIDGPR 199 (284)
Q Consensus 158 ~~~C~p~~~~lr~~S~CkLAL~~LP~evYe~eWDvImVDgP~ 199 (284)
+ ...+|+|++|-|+
T Consensus 214 ~----------------------------~~~fD~Ii~DPP~ 227 (317)
T d2b78a2 214 H----------------------------HLTYDIIIIDPPS 227 (317)
T ss_dssp T----------------------------TCCEEEEEECCCC
T ss_pred h----------------------------cCCCCEEEEcChh
Confidence 0 1259999999884
No 33
>d2cqaa1 b.40.4.14 (A:8-89) RuvB-like 2 protein, RUVBL2 (TIP49b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.76 E-value=17 Score=26.32 Aligned_cols=21 Identities=33% Similarity=0.463 Sum_probs=16.0
Q ss_pred CCChhhhc-------ccccEEEEeCCCC
Q 048818 180 ELPDDVYN-------REWDVIFIDGPRG 200 (284)
Q Consensus 180 ~LP~evYe-------~eWDvImVDgP~G 200 (284)
+|.+.+|| ..=|||.||+-+|
T Consensus 42 ~lg~ki~e~L~kekV~~GDVI~ID~~sG 69 (82)
T d2cqaa1 42 DLGTKMIESLTKDKVQAGDVITIDKATG 69 (82)
T ss_dssp EECSHHHHHHHHTTCCTTSEEEEETTTT
T ss_pred eCCHHHHHHHHHcCCCcCCEEEEECCCc
Confidence 45666666 4679999999887
No 34
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=20.31 E-value=90 Score=25.31 Aligned_cols=58 Identities=16% Similarity=0.203 Sum_probs=35.6
Q ss_pred CChhhhhcHHHHhccCCCCcEEEeccCchhh---hhhhcCCCCceeEeccChhHHHHHhhh
Q 048818 73 LTLPEIRVPFDALLGLAPCNLLVFGLGHDSL---MWASLNPRGTTIFLEEDSKLVHTILAR 130 (284)
Q Consensus 73 qt~~Ei~~~~~vL~~raPCNfLVFGLg~dsl---mW~aLN~gGrTvFLEEd~~~i~~v~~~ 130 (284)
.-.++++.+..-+.=+.--++|=.|-|.-++ |-.+++++|+-+=+|-+++.++.++++
T Consensus 69 iypkD~~~Ii~~l~i~pG~rVLEiG~GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n 129 (250)
T d1yb2a1 69 ISEIDASYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDN 129 (250)
T ss_dssp ------------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCCcCEEEEeeeeCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHH
Confidence 5568888877666666667999999988865 233568899988899999988887765
No 35
>d2oyra1 c.66.1.55 (A:1-250) Hypothetical protein YhiQ {Shigella flexneri [TaxId: 623]}
Probab=20.16 E-value=31 Score=28.78 Aligned_cols=29 Identities=28% Similarity=0.465 Sum_probs=23.9
Q ss_pred ccCchhhhhhhcCCCCceeEeccChhHHHHH
Q 048818 97 GLGHDSLMWASLNPRGTTIFLEEDSKLVHTI 127 (284)
Q Consensus 97 GLg~dslmW~aLN~gGrTvFLEEd~~~i~~v 127 (284)
|||.|++..+++ |++-+.+|-+|.-..-+
T Consensus 98 GlG~Da~vlA~~--G~~V~~iEr~p~l~~ll 126 (250)
T d2oyra1 98 GLGRDAFVLASV--GCRVRMLERNPVVAALL 126 (250)
T ss_dssp TTCHHHHHHHHH--TCCEEEEECCHHHHHHH
T ss_pred cccHHHHHHHhC--CCEEEEEccCHHHHHHH
Confidence 999999999988 67888888888665544
Done!