Query 048823
Match_columns 699
No_of_seqs 538 out of 4311
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 00:18:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048823.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048823hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zxi_A TRNA uridine 5-carboxym 100.0 3E-138 1E-142 1182.3 43.1 576 76-664 26-635 (637)
2 3ces_A MNMG, tRNA uridine 5-ca 100.0 3E-138 9E-143 1187.2 37.5 588 76-664 27-643 (651)
3 3cp8_A TRNA uridine 5-carboxym 100.0 5E-133 2E-137 1143.4 42.0 590 74-664 18-641 (641)
4 3g5s_A Methylenetetrahydrofola 100.0 1.3E-67 4.4E-72 563.2 19.9 330 78-483 2-400 (443)
5 2cul_A Glucose-inhibited divis 99.9 2.1E-22 7.3E-27 204.6 21.0 174 77-286 3-182 (232)
6 3v76_A Flavoprotein; structura 99.9 3.6E-22 1.2E-26 220.5 15.3 329 75-435 25-416 (417)
7 2gqf_A Hypothetical protein HI 99.8 6.6E-19 2.2E-23 193.5 20.5 329 76-438 3-400 (401)
8 3nlc_A Uncharacterized protein 99.8 6.1E-18 2.1E-22 192.1 19.1 87 356-442 450-544 (549)
9 2i0z_A NAD(FAD)-utilizing dehy 99.7 3.3E-17 1.1E-21 182.4 13.2 147 76-231 25-191 (447)
10 4fk1_A Putative thioredoxin re 99.6 1.2E-14 4.3E-19 152.8 16.6 113 75-230 4-116 (304)
11 1kf6_A Fumarate reductase flav 99.6 7.7E-14 2.6E-18 160.8 21.6 61 172-233 133-199 (602)
12 4a5l_A Thioredoxin reductase; 99.6 2.1E-14 7E-19 151.0 14.2 119 75-230 2-120 (314)
13 1y0p_A Fumarate reductase flav 99.5 2E-14 6.7E-19 165.0 14.1 156 76-234 125-320 (571)
14 4at0_A 3-ketosteroid-delta4-5a 99.5 3.9E-14 1.3E-18 160.3 15.0 59 174-233 203-266 (510)
15 2h88_A Succinate dehydrogenase 99.5 1.2E-13 4.1E-18 159.3 18.8 74 172-250 154-233 (621)
16 1qo8_A Flavocytochrome C3 fuma 99.5 2.7E-14 9.1E-19 163.7 13.0 154 76-233 120-314 (566)
17 1chu_A Protein (L-aspartate ox 99.5 1.6E-14 5.6E-19 164.4 10.1 60 173-232 138-209 (540)
18 2bs2_A Quinol-fumarate reducta 99.5 2.2E-13 7.7E-18 158.2 19.5 74 172-250 157-236 (660)
19 3oz2_A Digeranylgeranylglycero 99.5 8.6E-14 2.9E-18 150.3 14.2 148 76-231 3-162 (397)
20 4gcm_A TRXR, thioredoxin reduc 99.5 1.9E-13 6.7E-18 143.9 14.7 45 397-442 261-307 (312)
21 3gyx_A Adenylylsulfate reducta 99.5 8.2E-14 2.8E-18 161.8 12.1 61 172-232 165-234 (662)
22 3fbs_A Oxidoreductase; structu 99.5 2.6E-12 9E-17 133.3 21.6 109 78-230 3-111 (297)
23 3dme_A Conserved exported prot 99.4 3.3E-12 1.1E-16 136.8 20.7 60 169-230 146-208 (369)
24 2wdq_A Succinate dehydrogenase 99.4 2.3E-13 7.8E-18 156.5 12.4 75 172-250 142-222 (588)
25 3f8d_A Thioredoxin reductase ( 99.4 3.1E-12 1E-16 134.4 17.3 110 77-230 15-124 (323)
26 2ywl_A Thioredoxin reductase r 99.4 8.1E-12 2.8E-16 120.7 18.7 108 78-230 2-109 (180)
27 4dgk_A Phytoene dehydrogenase; 99.4 1.9E-12 6.5E-17 145.5 15.7 57 173-231 221-278 (501)
28 2q0l_A TRXR, thioredoxin reduc 99.4 3.9E-12 1.3E-16 133.5 15.6 112 78-231 2-114 (311)
29 3itj_A Thioredoxin reductase 1 99.3 3.8E-12 1.3E-16 134.7 12.7 119 75-230 20-141 (338)
30 3cty_A Thioredoxin reductase; 99.3 1.4E-11 4.9E-16 129.9 17.1 113 74-230 13-125 (319)
31 3lzw_A Ferredoxin--NADP reduct 99.3 1.6E-11 5.6E-16 129.4 17.1 115 77-230 7-122 (332)
32 4a9w_A Monooxygenase; baeyer-v 99.3 2.6E-11 9E-16 128.9 18.7 130 77-232 3-133 (357)
33 2q7v_A Thioredoxin reductase; 99.3 1.1E-11 3.8E-16 131.1 15.4 115 76-230 7-122 (325)
34 1fl2_A Alkyl hydroperoxide red 99.3 3.7E-11 1.2E-15 126.0 16.6 112 77-230 1-114 (310)
35 3dje_A Fructosyl amine: oxygen 99.3 1.3E-11 4.6E-16 136.2 13.9 63 168-232 156-222 (438)
36 1vdc_A NTR, NADPH dependent th 99.3 2.8E-11 9.5E-16 128.2 13.7 118 76-231 7-124 (333)
37 3cgv_A Geranylgeranyl reductas 99.3 1.1E-11 3.7E-16 134.5 10.1 146 77-231 4-162 (397)
38 3r9u_A Thioredoxin reductase; 99.2 9.3E-11 3.2E-15 122.6 16.5 113 76-230 3-117 (315)
39 3urh_A Dihydrolipoyl dehydroge 99.2 7.2E-12 2.5E-16 140.9 7.7 34 76-109 24-57 (491)
40 3l8k_A Dihydrolipoyl dehydroge 99.2 6.5E-12 2.2E-16 140.3 5.9 124 76-230 3-143 (466)
41 1hyu_A AHPF, alkyl hydroperoxi 99.2 1.8E-10 6.3E-15 130.5 17.9 113 76-230 211-325 (521)
42 2a87_A TRXR, TR, thioredoxin r 99.2 4E-11 1.4E-15 127.5 11.3 113 75-230 12-125 (335)
43 1y56_B Sarcosine oxidase; dehy 99.2 7.3E-11 2.5E-15 127.5 12.8 60 168-230 144-204 (382)
44 1trb_A Thioredoxin reductase; 99.2 5.6E-11 1.9E-15 125.0 11.4 112 76-230 4-115 (320)
45 3nix_A Flavoprotein/dehydrogen 99.2 7.4E-11 2.5E-15 129.2 12.7 147 77-231 5-166 (421)
46 3lad_A Dihydrolipoamide dehydr 99.2 2.3E-11 8E-16 136.1 8.6 34 76-109 2-35 (476)
47 3atr_A Conserved archaeal prot 99.2 5.3E-11 1.8E-15 132.4 10.9 148 76-232 5-163 (453)
48 1ryi_A Glycine oxidase; flavop 99.2 4E-11 1.4E-15 129.5 9.0 60 168-231 159-219 (382)
49 2x3n_A Probable FAD-dependent 99.2 1.1E-10 3.6E-15 127.4 12.0 147 77-231 6-166 (399)
50 3i3l_A Alkylhalidase CMLS; fla 99.2 1.5E-10 5E-15 133.0 13.6 148 75-231 21-188 (591)
51 4b1b_A TRXR, thioredoxin reduc 99.1 5.9E-12 2E-16 143.0 1.7 33 77-109 42-74 (542)
52 2gmh_A Electron transfer flavo 99.1 7.2E-11 2.5E-15 135.6 10.3 149 76-231 34-217 (584)
53 2gag_B Heterotetrameric sarcos 99.1 1.3E-10 4.3E-15 126.5 11.7 60 168-230 169-229 (405)
54 3da1_A Glycerol-3-phosphate de 99.1 1.4E-10 4.8E-15 132.6 12.4 63 166-230 163-231 (561)
55 3ps9_A TRNA 5-methylaminomethy 99.1 2.5E-10 8.5E-15 133.4 14.6 61 168-231 412-473 (676)
56 3pvc_A TRNA 5-methylaminomethy 99.1 3.1E-10 1.1E-14 132.9 14.7 61 168-231 407-469 (689)
57 3o0h_A Glutathione reductase; 99.1 5.1E-11 1.7E-15 133.7 7.7 33 76-108 25-57 (484)
58 3jsk_A Cypbp37 protein; octame 99.1 7.9E-10 2.7E-14 117.8 16.3 133 76-231 78-251 (344)
59 1rp0_A ARA6, thiazole biosynth 99.1 5.5E-10 1.9E-14 116.4 14.8 133 76-231 38-191 (284)
60 2uzz_A N-methyl-L-tryptophan o 99.1 1.6E-10 5.6E-15 124.2 10.4 60 168-231 144-204 (372)
61 3nyc_A D-arginine dehydrogenas 99.1 2.4E-10 8.1E-15 123.0 11.5 59 168-230 149-208 (381)
62 3sx6_A Sulfide-quinone reducta 99.1 2.9E-11 9.9E-16 133.9 3.9 105 77-230 4-111 (437)
63 3rp8_A Flavoprotein monooxygen 99.1 1.8E-10 6E-15 126.0 10.1 149 75-234 21-184 (407)
64 3e1t_A Halogenase; flavoprotei 99.1 2.8E-10 9.6E-15 128.6 12.0 149 76-233 6-174 (512)
65 1d4d_A Flavocytochrome C fumar 99.1 4.4E-10 1.5E-14 128.8 13.7 154 76-233 125-319 (572)
66 3ka7_A Oxidoreductase; structu 99.1 3.1E-09 1.1E-13 116.4 19.6 56 173-231 196-252 (425)
67 3dk9_A Grase, GR, glutathione 99.1 7.8E-10 2.7E-14 123.8 14.8 34 76-109 19-52 (478)
68 3fmw_A Oxygenase; mithramycin, 99.1 4.3E-10 1.5E-14 128.7 12.5 147 76-231 48-207 (570)
69 3ic9_A Dihydrolipoamide dehydr 99.1 8.6E-11 3E-15 132.2 6.6 33 77-109 8-40 (492)
70 2oln_A NIKD protein; flavoprot 99.1 5.4E-10 1.9E-14 121.5 12.5 58 169-230 149-207 (397)
71 2qcu_A Aerobic glycerol-3-phos 99.1 5.5E-10 1.9E-14 125.9 12.5 61 168-231 144-210 (501)
72 2qa1_A PGAE, polyketide oxygen 99.0 9.5E-10 3.2E-14 124.0 13.6 149 74-231 8-165 (500)
73 2gjc_A Thiazole biosynthetic e 99.0 1.5E-09 5.1E-14 115.0 14.2 136 76-230 64-238 (326)
74 2aqj_A Tryptophan halogenase, 99.0 1.2E-09 4.2E-14 124.1 14.4 63 169-232 161-223 (538)
75 3axb_A Putative oxidoreductase 99.0 5.1E-10 1.7E-14 124.0 10.8 61 168-231 176-254 (448)
76 1yvv_A Amine oxidase, flavin-c 99.0 3.1E-09 1.1E-13 112.3 16.4 32 78-109 3-34 (336)
77 3ihg_A RDME; flavoenzyme, anth 99.0 1.6E-09 5.5E-14 122.9 15.1 150 76-231 4-183 (535)
78 1k0i_A P-hydroxybenzoate hydro 99.0 8.3E-10 2.8E-14 119.9 12.0 147 77-236 2-168 (394)
79 4dna_A Probable glutathione re 99.0 5.3E-11 1.8E-15 132.8 2.4 32 77-108 5-36 (463)
80 2rgh_A Alpha-glycerophosphate 99.0 1.5E-09 5.2E-14 124.2 14.0 63 167-231 182-250 (571)
81 2weu_A Tryptophan 5-halogenase 99.0 1E-09 3.6E-14 123.7 12.4 63 169-232 169-231 (511)
82 2qa2_A CABE, polyketide oxygen 99.0 1.5E-09 5.1E-14 122.3 13.4 147 76-231 11-166 (499)
83 1jnr_A Adenylylsulfate reducta 99.0 3.5E-10 1.2E-14 131.3 8.2 155 75-232 20-219 (643)
84 1pj5_A N,N-dimethylglycine oxi 99.0 8.2E-10 2.8E-14 132.1 11.1 60 168-230 146-206 (830)
85 3alj_A 2-methyl-3-hydroxypyrid 99.0 1.2E-09 4.1E-14 118.3 11.3 141 77-231 11-160 (379)
86 2e4g_A Tryptophan halogenase; 99.0 2.2E-09 7.7E-14 122.3 14.0 64 169-232 190-253 (550)
87 3c4n_A Uncharacterized protein 99.0 3.9E-10 1.3E-14 123.5 6.8 59 168-230 167-235 (405)
88 2pyx_A Tryptophan halogenase; 99.0 6.8E-09 2.3E-13 117.6 16.4 64 169-232 171-234 (526)
89 2gf3_A MSOX, monomeric sarcosi 99.0 2.2E-09 7.4E-14 116.0 11.6 59 169-231 146-205 (389)
90 3h8l_A NADH oxidase; membrane 98.9 5.7E-10 2E-14 122.1 6.9 49 397-445 289-340 (409)
91 3h28_A Sulfide-quinone reducta 98.9 1.1E-10 3.7E-15 129.0 1.0 50 397-446 276-338 (430)
92 2e5v_A L-aspartate oxidase; ar 98.9 2.1E-09 7.1E-14 120.3 10.9 148 79-232 1-177 (472)
93 2bry_A NEDD9 interacting prote 98.9 3.1E-09 1.1E-13 119.7 12.3 136 76-234 91-233 (497)
94 2vou_A 2,6-dihydroxypyridine h 98.9 2.9E-09 1E-13 116.0 11.6 146 77-233 5-155 (397)
95 2xdo_A TETX2 protein; tetracyc 98.9 2.4E-09 8.3E-14 116.7 10.9 152 76-236 25-187 (398)
96 3c96_A Flavin-containing monoo 98.9 2.4E-09 8.4E-14 117.1 11.0 146 76-232 3-170 (410)
97 3ab1_A Ferredoxin--NADP reduct 98.9 5.1E-09 1.8E-13 112.2 12.0 119 75-231 12-131 (360)
98 3uox_A Otemo; baeyer-villiger 98.9 4.8E-09 1.6E-13 119.4 11.9 134 76-231 8-147 (545)
99 3gwf_A Cyclohexanone monooxyge 98.9 2.8E-09 9.5E-14 121.2 9.0 134 76-233 7-149 (540)
100 2dkh_A 3-hydroxybenzoate hydro 98.9 6.1E-09 2.1E-13 120.9 11.8 151 75-231 30-211 (639)
101 1w4x_A Phenylacetone monooxyge 98.9 3.9E-09 1.3E-13 120.1 9.8 138 76-233 15-156 (542)
102 4ap3_A Steroid monooxygenase; 98.8 4E-09 1.4E-13 120.1 9.4 133 76-230 20-158 (549)
103 2zbw_A Thioredoxin reductase; 98.8 1.1E-08 3.7E-13 108.2 11.9 116 76-230 4-120 (335)
104 3hyw_A Sulfide-quinone reducta 98.8 4.1E-10 1.4E-14 124.4 0.9 49 397-445 276-337 (430)
105 2r0c_A REBC; flavin adenine di 98.8 1.2E-08 4.3E-13 116.1 12.7 145 76-231 25-196 (549)
106 3kkj_A Amine oxidase, flavin-c 98.8 9E-08 3.1E-12 95.3 17.0 44 400-444 288-331 (336)
107 4hb9_A Similarities with proba 98.8 9.1E-09 3.1E-13 111.5 10.0 146 79-233 3-168 (412)
108 2gv8_A Monooxygenase; FMO, FAD 98.8 4.5E-08 1.6E-12 108.4 14.6 152 77-232 6-178 (447)
109 3d1c_A Flavin-containing putat 98.8 1.3E-08 4.3E-13 109.1 9.4 137 77-231 4-143 (369)
110 3k30_A Histamine dehydrogenase 98.7 2.2E-08 7.7E-13 117.2 10.7 46 406-451 640-685 (690)
111 3dgz_A Thioredoxin reductase 2 98.7 2.9E-09 9.8E-14 119.6 2.9 33 76-108 5-37 (488)
112 3qfa_A Thioredoxin reductase 1 98.7 4.2E-09 1.4E-13 119.2 4.1 35 75-109 30-64 (519)
113 1c0p_A D-amino acid oxidase; a 98.7 1.6E-08 5.5E-13 108.5 8.1 34 76-109 5-38 (363)
114 2xve_A Flavin-containing monoo 98.7 6.6E-08 2.3E-12 107.8 12.6 147 78-233 3-168 (464)
115 3dgh_A TRXR-1, thioredoxin red 98.7 5.3E-09 1.8E-13 117.2 3.5 33 76-108 8-40 (483)
116 3s5w_A L-ornithine 5-monooxyge 98.7 4E-08 1.4E-12 109.1 10.5 147 76-230 29-191 (463)
117 3vrd_B FCCB subunit, flavocyto 98.7 3.2E-07 1.1E-11 99.7 17.5 49 400-448 279-331 (401)
118 2hqm_A GR, grase, glutathione 98.6 1.1E-08 3.8E-13 114.5 4.6 34 76-109 10-43 (479)
119 1zk7_A HGII, reductase, mercur 98.6 1.5E-07 5E-12 104.9 13.1 34 76-109 3-36 (467)
120 1ojt_A Surface protein; redox- 98.6 2.2E-08 7.4E-13 112.2 6.0 35 75-109 4-38 (482)
121 1pn0_A Phenol 2-monooxygenase; 98.6 6.4E-08 2.2E-12 112.7 10.0 120 77-202 8-151 (665)
122 1fec_A Trypanothione reductase 98.6 1.8E-08 6.2E-13 113.1 5.1 31 77-107 3-34 (490)
123 3q9t_A Choline dehydrogenase a 98.6 5.4E-08 1.9E-12 111.2 9.0 70 185-266 217-293 (577)
124 1mo9_A ORF3; nucleotide bindin 98.6 8.1E-07 2.8E-11 100.5 18.6 97 78-230 215-315 (523)
125 3g3e_A D-amino-acid oxidase; F 98.6 2.1E-08 7.2E-13 107.1 5.2 92 356-451 246-345 (351)
126 1ebd_A E3BD, dihydrolipoamide 98.6 3.7E-08 1.3E-12 109.4 7.3 33 77-109 3-35 (455)
127 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 2.3E-08 7.8E-13 106.5 4.9 141 78-230 2-164 (342)
128 4eqs_A Coenzyme A disulfide re 98.6 4E-07 1.4E-11 100.6 14.6 31 79-109 2-34 (437)
129 2wpf_A Trypanothione reductase 98.6 2.4E-08 8.1E-13 112.4 4.1 33 75-107 5-38 (495)
130 2qae_A Lipoamide, dihydrolipoy 98.5 2.3E-08 8E-13 111.4 3.6 33 77-109 2-34 (468)
131 1v59_A Dihydrolipoamide dehydr 98.5 1.5E-08 5.1E-13 113.3 1.8 34 76-109 4-37 (478)
132 2r9z_A Glutathione amide reduc 98.5 4.8E-08 1.6E-12 108.9 6.0 34 76-109 3-36 (463)
133 3qvp_A Glucose oxidase; oxidor 98.5 2.1E-07 7.3E-12 106.3 11.4 69 186-266 239-316 (583)
134 2a8x_A Dihydrolipoyl dehydroge 98.5 2.2E-08 7.6E-13 111.5 3.1 33 77-109 3-35 (464)
135 3nrn_A Uncharacterized protein 98.5 3.3E-07 1.1E-11 100.4 12.1 54 173-231 189-243 (421)
136 3k7m_X 6-hydroxy-L-nicotine ox 98.5 1.4E-07 4.8E-12 103.4 9.2 32 78-109 2-33 (431)
137 1dxl_A Dihydrolipoamide dehydr 98.5 2.3E-08 7.9E-13 111.4 2.8 34 76-109 5-38 (470)
138 1ges_A Glutathione reductase; 98.5 2.1E-08 7E-13 111.4 1.8 34 76-109 3-36 (450)
139 3p1w_A Rabgdi protein; GDI RAB 98.5 3.1E-07 1E-11 102.3 10.8 57 173-230 256-313 (475)
140 1zmd_A Dihydrolipoyl dehydroge 98.5 2.2E-07 7.5E-12 103.7 9.5 34 76-109 5-38 (474)
141 3ab1_A Ferredoxin--NADP reduct 98.5 1.6E-06 5.5E-11 92.6 15.0 94 78-230 164-262 (360)
142 2yqu_A 2-oxoglutarate dehydrog 98.5 2.6E-07 8.9E-12 102.5 9.0 33 77-109 1-33 (455)
143 1xdi_A RV3303C-LPDA; reductase 98.5 5.2E-07 1.8E-11 101.4 11.5 33 77-109 2-37 (499)
144 2zbw_A Thioredoxin reductase; 98.5 3.9E-06 1.3E-10 88.4 17.5 93 78-230 153-251 (335)
145 3t37_A Probable dehydrogenase; 98.4 2.8E-07 9.5E-12 104.0 8.5 57 179-236 216-276 (526)
146 1lvl_A Dihydrolipoamide dehydr 98.4 1.6E-07 5.5E-12 104.4 5.8 33 76-108 4-36 (458)
147 1onf_A GR, grase, glutathione 98.4 4E-08 1.4E-12 110.6 0.9 33 77-109 2-34 (500)
148 2eq6_A Pyruvate dehydrogenase 98.4 9.4E-08 3.2E-12 106.5 3.6 33 77-109 6-38 (464)
149 1mo9_A ORF3; nucleotide bindin 98.4 2.2E-07 7.4E-12 105.2 6.1 35 75-109 41-75 (523)
150 3oc4_A Oxidoreductase, pyridin 98.4 5E-07 1.7E-11 100.1 8.1 108 78-230 3-114 (452)
151 2x8g_A Thioredoxin glutathione 98.3 2.5E-07 8.7E-12 106.3 5.6 33 76-108 106-138 (598)
152 3i6d_A Protoporphyrinogen oxid 98.3 9.2E-07 3.2E-11 97.7 9.3 33 77-109 5-43 (470)
153 3pl8_A Pyranose 2-oxidase; sub 98.3 1E-06 3.5E-11 101.7 9.8 35 75-109 44-78 (623)
154 3kd9_A Coenzyme A disulfide re 98.3 9.4E-07 3.2E-11 97.8 9.0 107 77-230 3-113 (449)
155 3dgh_A TRXR-1, thioredoxin red 98.3 1.1E-05 3.9E-10 90.0 17.5 93 79-229 189-287 (483)
156 4b63_A L-ornithine N5 monooxyg 98.3 1.8E-06 6.2E-11 97.1 11.0 60 170-229 142-212 (501)
157 3fim_B ARYL-alcohol oxidase; A 98.3 7.2E-07 2.5E-11 101.7 7.6 70 185-266 219-299 (566)
158 1q1r_A Putidaredoxin reductase 98.3 6.6E-07 2.3E-11 98.7 6.7 107 77-230 4-113 (431)
159 3iwa_A FAD-dependent pyridine 98.3 1.2E-06 4E-11 97.7 8.7 32 78-109 4-37 (472)
160 3c4a_A Probable tryptophan hyd 98.3 9E-08 3.1E-12 103.6 -0.6 134 79-236 2-147 (381)
161 3nks_A Protoporphyrinogen oxid 98.3 1.5E-06 5.2E-11 96.4 9.3 55 174-231 235-290 (477)
162 1nhp_A NADH peroxidase; oxidor 98.2 8.7E-07 3E-11 98.0 6.9 32 78-109 1-34 (447)
163 1xhc_A NADH oxidase /nitrite r 98.2 9E-07 3.1E-11 95.5 6.5 32 77-109 8-39 (367)
164 3cgb_A Pyridine nucleotide-dis 98.2 1.1E-06 3.8E-11 98.2 7.3 33 77-109 36-70 (480)
165 2cdu_A NADPH oxidase; flavoenz 98.2 1.1E-06 3.8E-11 97.3 7.0 32 78-109 1-34 (452)
166 3lxd_A FAD-dependent pyridine 98.2 9.2E-07 3.2E-11 96.8 6.0 108 76-230 8-118 (415)
167 3klj_A NAD(FAD)-dependent dehy 98.2 1.7E-06 6E-11 93.9 8.1 106 77-230 9-115 (385)
168 1kdg_A CDH, cellobiose dehydro 98.2 3.4E-06 1.2E-10 95.8 10.7 53 179-232 201-262 (546)
169 3ihm_A Styrene monooxygenase A 98.2 8.8E-07 3E-11 97.6 5.4 138 77-231 22-167 (430)
170 2bc0_A NADH oxidase; flavoprot 98.2 6.3E-07 2.2E-11 100.5 4.3 33 77-109 35-70 (490)
171 1y56_A Hypothetical protein PH 98.2 2.6E-06 8.7E-11 95.7 8.4 109 76-230 107-218 (493)
172 3lxd_A FAD-dependent pyridine 98.2 8.5E-06 2.9E-10 89.1 12.4 97 78-230 153-250 (415)
173 2gag_A Heterotetrameric sarcos 98.2 4E-06 1.4E-10 101.6 10.6 110 76-230 127-252 (965)
174 3fg2_P Putative rubredoxin red 98.1 9.1E-06 3.1E-10 88.6 11.9 97 78-230 143-240 (404)
175 3fg2_P Putative rubredoxin red 98.1 2E-06 6.7E-11 93.9 6.5 106 78-230 2-109 (404)
176 3ics_A Coenzyme A-disulfide re 98.1 3.6E-06 1.2E-10 96.5 8.9 110 77-230 36-151 (588)
177 3lov_A Protoporphyrinogen oxid 98.1 3.4E-06 1.2E-10 93.7 7.6 33 77-109 4-38 (475)
178 2v3a_A Rubredoxin reductase; a 98.1 1.9E-05 6.4E-10 85.4 12.3 96 78-230 146-242 (384)
179 2v3a_A Rubredoxin reductase; a 98.0 4.1E-06 1.4E-10 90.7 6.7 33 77-109 4-38 (384)
180 4g6h_A Rotenone-insensitive NA 98.0 6.5E-05 2.2E-09 84.4 16.6 94 79-230 219-331 (502)
181 1q1r_A Putidaredoxin reductase 98.0 2E-05 6.8E-10 86.8 12.0 97 78-230 150-249 (431)
182 1gpe_A Protein (glucose oxidas 98.0 7.8E-06 2.7E-10 93.7 8.8 70 185-266 242-320 (587)
183 3ntd_A FAD-dependent pyridine 98.0 6.5E-06 2.2E-10 93.7 7.9 32 78-109 2-35 (565)
184 2jbv_A Choline oxidase; alcoho 98.0 3E-06 1E-10 96.4 5.0 48 185-232 220-274 (546)
185 3ef6_A Toluene 1,2-dioxygenase 98.0 6.1E-06 2.1E-10 90.2 7.2 105 78-230 3-110 (410)
186 3qfa_A Thioredoxin reductase 1 98.0 0.00016 5.5E-09 81.5 18.7 95 79-230 212-314 (519)
187 2yqu_A 2-oxoglutarate dehydrog 98.0 2.4E-05 8.1E-10 86.6 11.4 95 78-230 168-263 (455)
188 1ges_A Glutathione reductase; 98.0 2.3E-05 7.9E-10 86.7 11.3 96 78-230 168-264 (450)
189 4g6h_A Rotenone-insensitive NA 98.0 9E-06 3.1E-10 91.4 7.9 46 397-442 354-402 (502)
190 3ef6_A Toluene 1,2-dioxygenase 98.0 2.2E-05 7.6E-10 85.7 10.8 96 78-230 144-240 (410)
191 2vdc_G Glutamate synthase [NAD 98.0 1.4E-05 4.9E-10 88.7 9.2 42 402-444 405-447 (456)
192 2gqw_A Ferredoxin reductase; f 98.0 9.4E-06 3.2E-10 88.7 7.4 104 76-230 6-112 (408)
193 1m6i_A Programmed cell death p 97.9 7.5E-06 2.6E-10 91.8 6.5 35 75-109 9-45 (493)
194 2hqm_A GR, grase, glutathione 97.9 3.1E-05 1.1E-09 86.4 11.2 97 78-230 186-284 (479)
195 1nhp_A NADH peroxidase; oxidor 97.9 3.6E-05 1.2E-09 84.9 11.6 96 77-230 149-245 (447)
196 3fpz_A Thiazole biosynthetic e 97.9 6.3E-06 2.2E-10 87.1 4.9 34 76-109 64-99 (326)
197 1v59_A Dihydrolipoamide dehydr 97.9 5.8E-05 2E-09 84.0 13.0 97 78-230 184-286 (478)
198 1gte_A Dihydropyrimidine dehyd 97.9 0.0001 3.6E-09 89.8 16.2 40 401-441 468-508 (1025)
199 4gut_A Lysine-specific histone 97.9 3.8E-05 1.3E-09 90.6 11.9 34 76-109 335-368 (776)
200 2eq6_A Pyruvate dehydrogenase 97.9 5.8E-05 2E-09 83.8 12.3 95 78-230 170-270 (464)
201 1fec_A Trypanothione reductase 97.9 5.2E-05 1.8E-09 84.8 11.7 96 78-230 188-287 (490)
202 2wpf_A Trypanothione reductase 97.9 5.6E-05 1.9E-09 84.7 11.7 96 78-230 192-291 (495)
203 4gde_A UDP-galactopyranose mut 97.8 7.7E-06 2.6E-10 91.5 4.6 33 77-109 10-43 (513)
204 2gqw_A Ferredoxin reductase; f 97.8 6.3E-05 2.2E-09 82.1 11.7 92 78-230 146-238 (408)
205 2r9z_A Glutathione amide reduc 97.8 5.9E-05 2E-09 83.8 11.4 94 79-230 168-263 (463)
206 2bcg_G Secretory pathway GDP d 97.8 1.1E-05 3.9E-10 89.3 5.5 56 174-231 243-300 (453)
207 2cdu_A NADPH oxidase; flavoenz 97.8 5.4E-05 1.8E-09 83.7 10.9 96 78-230 150-246 (452)
208 1trb_A Thioredoxin reductase; 97.8 8.2E-05 2.8E-09 77.5 11.6 94 78-230 146-246 (320)
209 1onf_A GR, grase, glutathione 97.8 6.7E-05 2.3E-09 84.2 11.3 96 78-230 177-274 (500)
210 3oc4_A Oxidoreductase, pyridin 97.8 0.00011 3.7E-09 81.2 12.9 95 78-230 148-243 (452)
211 3iwa_A FAD-dependent pyridine 97.8 8.1E-05 2.8E-09 82.7 11.6 96 78-230 160-257 (472)
212 1ebd_A E3BD, dihydrolipoamide 97.8 9.7E-05 3.3E-09 81.7 12.1 95 78-230 171-269 (455)
213 2bc0_A NADH oxidase; flavoprot 97.7 9.7E-05 3.3E-09 82.6 11.3 95 78-230 195-290 (490)
214 1ojt_A Surface protein; redox- 97.7 8.4E-05 2.9E-09 82.9 10.7 95 78-230 186-285 (482)
215 1zmd_A Dihydrolipoyl dehydroge 97.7 0.00013 4.3E-09 81.2 11.9 97 78-230 179-281 (474)
216 3o0h_A Glutathione reductase; 97.7 0.00012 4.1E-09 81.7 11.4 95 78-230 192-287 (484)
217 1ps9_A 2,4-dienoyl-COA reducta 97.7 2.4E-05 8.1E-10 91.2 5.8 34 76-109 372-405 (671)
218 3itj_A Thioredoxin reductase 1 97.7 0.00012 4.1E-09 76.7 10.6 91 78-230 174-270 (338)
219 3cgb_A Pyridine nucleotide-dis 97.7 0.00011 3.9E-09 81.8 10.9 94 78-230 187-281 (480)
220 1xdi_A RV3303C-LPDA; reductase 97.7 0.00016 5.5E-09 81.0 11.9 95 78-230 183-278 (499)
221 3s5w_A L-ornithine 5-monooxyge 97.7 0.00014 4.7E-09 80.4 11.1 139 78-230 228-376 (463)
222 4dna_A Probable glutathione re 97.7 0.00013 4.6E-09 80.8 10.9 95 78-230 171-267 (463)
223 1lqt_A FPRA; NADP+ derivative, 97.7 1.1E-05 3.8E-10 89.6 2.1 45 398-442 342-388 (456)
224 1xhc_A NADH oxidase /nitrite r 97.6 0.00012 4E-09 78.8 9.8 89 78-230 144-233 (367)
225 1lvl_A Dihydrolipoamide dehydr 97.6 0.00013 4.5E-09 80.8 10.3 93 78-230 172-267 (458)
226 1m6i_A Programmed cell death p 97.6 0.00019 6.4E-09 80.4 11.4 96 78-230 181-281 (493)
227 1zk7_A HGII, reductase, mercur 97.6 0.0002 6.7E-09 79.5 11.4 93 78-230 177-270 (467)
228 1gte_A Dihydropyrimidine dehyd 97.6 1.8E-05 6E-10 96.6 2.6 34 76-109 186-220 (1025)
229 1fl2_A Alkyl hydroperoxide red 97.6 0.00033 1.1E-08 72.6 12.0 90 78-229 145-240 (310)
230 2qae_A Lipoamide, dihydrolipoy 97.6 0.00024 8.4E-09 78.7 11.5 95 78-230 175-275 (468)
231 2a8x_A Dihydrolipoyl dehydroge 97.6 0.00028 9.7E-09 78.1 12.0 95 78-230 172-270 (464)
232 3ntd_A FAD-dependent pyridine 97.6 0.00028 9.7E-09 80.1 12.0 95 79-230 153-266 (565)
233 1v0j_A UDP-galactopyranose mut 97.6 4.9E-05 1.7E-09 82.8 5.1 34 76-109 6-40 (399)
234 3dk9_A Grase, GR, glutathione 97.5 0.00035 1.2E-08 77.7 12.1 97 78-230 188-292 (478)
235 1s3e_A Amine oxidase [flavin-c 97.5 4.7E-05 1.6E-09 85.6 5.1 34 76-109 3-36 (520)
236 2q0l_A TRXR, thioredoxin reduc 97.5 0.00018 6.1E-09 74.7 8.9 91 78-230 144-240 (311)
237 1dxl_A Dihydrolipoamide dehydr 97.5 0.0002 6.8E-09 79.4 9.9 95 78-230 178-278 (470)
238 3urh_A Dihydrolipoyl dehydroge 97.5 0.00036 1.2E-08 77.9 11.8 95 78-230 199-299 (491)
239 4b1b_A TRXR, thioredoxin reduc 97.5 0.00041 1.4E-08 78.5 12.1 93 79-230 225-318 (542)
240 2b9w_A Putative aminooxidase; 97.5 6.8E-05 2.3E-09 81.7 5.6 34 76-109 5-39 (424)
241 3ic9_A Dihydrolipoamide dehydr 97.5 0.00041 1.4E-08 77.6 12.0 94 78-230 175-273 (492)
242 3lad_A Dihydrolipoamide dehydr 97.5 0.00045 1.5E-08 76.7 12.2 95 78-230 181-279 (476)
243 3ics_A Coenzyme A-disulfide re 97.5 0.0003 1E-08 80.5 10.9 93 78-230 188-281 (588)
244 2q7v_A Thioredoxin reductase; 97.5 0.00021 7E-09 74.9 8.8 90 78-230 153-248 (325)
245 1rsg_A FMS1 protein; FAD bindi 97.5 5.3E-05 1.8E-09 85.2 4.4 34 76-109 7-41 (516)
246 2jae_A L-amino acid oxidase; o 97.5 7.6E-05 2.6E-09 83.1 5.6 35 75-109 9-43 (489)
247 3hdq_A UDP-galactopyranose mut 97.5 7.1E-05 2.4E-09 81.4 5.2 35 75-109 27-61 (397)
248 3cty_A Thioredoxin reductase; 97.5 0.00017 5.7E-09 75.4 7.5 90 78-230 156-251 (319)
249 2vvm_A Monoamine oxidase N; FA 97.4 8.1E-05 2.8E-09 83.0 5.0 56 174-231 256-312 (495)
250 3r9u_A Thioredoxin reductase; 97.4 0.00029 1E-08 72.8 8.9 91 78-230 148-243 (315)
251 2yg5_A Putrescine oxidase; oxi 97.4 9.4E-05 3.2E-09 81.4 4.9 34 76-109 4-37 (453)
252 2ivd_A PPO, PPOX, protoporphyr 97.4 8.5E-05 2.9E-09 82.3 4.6 34 76-109 15-48 (478)
253 2e1m_A L-glutamate oxidase; L- 97.4 0.00012 4.2E-09 78.9 5.6 34 76-109 43-76 (376)
254 4eqs_A Coenzyme A disulfide re 97.4 0.00038 1.3E-08 76.7 9.5 90 79-230 149-239 (437)
255 1i8t_A UDP-galactopyranose mut 97.4 9E-05 3.1E-09 79.7 4.2 32 78-109 2-33 (367)
256 3dgz_A Thioredoxin reductase 2 97.4 0.00087 3E-08 74.7 12.4 94 79-230 187-286 (488)
257 1d5t_A Guanine nucleotide diss 97.4 0.00014 4.7E-09 80.1 5.7 55 174-231 235-290 (433)
258 1sez_A Protoporphyrinogen oxid 97.4 0.00011 3.7E-09 82.1 4.8 34 76-109 12-45 (504)
259 3f8d_A Thioredoxin reductase ( 97.3 0.00093 3.2E-08 69.1 11.6 90 78-230 155-250 (323)
260 1vdc_A NTR, NADPH dependent th 97.3 0.00043 1.5E-08 72.5 8.8 91 78-230 160-258 (333)
261 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00081 2.8E-08 75.7 11.6 91 78-230 356-452 (521)
262 3d1c_A Flavin-containing putat 97.3 0.00083 2.9E-08 71.3 10.9 102 79-230 168-271 (369)
263 3kd9_A Coenzyme A disulfide re 97.2 0.00093 3.2E-08 73.6 10.3 93 79-230 150-243 (449)
264 3gwf_A Cyclohexanone monooxyge 97.2 0.0012 4E-08 74.8 11.1 32 78-109 179-210 (540)
265 3fbs_A Oxidoreductase; structu 97.2 0.00034 1.2E-08 71.7 6.0 84 78-230 142-225 (297)
266 2iid_A L-amino-acid oxidase; f 97.2 0.00024 8.3E-09 79.2 5.2 34 76-109 32-65 (498)
267 2vdc_G Glutamate synthase [NAD 97.1 0.0003 1E-08 78.0 5.4 34 76-109 121-154 (456)
268 2bi7_A UDP-galactopyranose mut 97.1 0.00027 9.3E-09 76.5 4.9 33 77-109 3-35 (384)
269 4dsg_A UDP-galactopyranose mut 97.1 0.00032 1.1E-08 78.4 5.5 34 76-109 8-42 (484)
270 1ju2_A HydroxynitrIle lyase; f 97.1 0.00013 4.4E-09 82.7 2.2 33 76-109 25-57 (536)
271 2a87_A TRXR, TR, thioredoxin r 97.1 0.00051 1.7E-08 72.3 5.9 89 78-230 156-251 (335)
272 2x8g_A Thioredoxin glutathione 97.0 0.0032 1.1E-07 72.0 13.0 30 79-108 288-317 (598)
273 3l8k_A Dihydrolipoyl dehydroge 97.0 0.0016 5.6E-08 72.1 9.2 93 78-230 173-271 (466)
274 4a5l_A Thioredoxin reductase; 96.9 0.0019 6.6E-08 66.8 8.4 41 400-441 270-312 (314)
275 1b37_A Protein (polyamine oxid 96.9 0.00064 2.2E-08 75.4 4.9 34 76-109 3-37 (472)
276 3uox_A Otemo; baeyer-villiger 96.9 0.00073 2.5E-08 76.6 5.4 32 78-109 186-217 (545)
277 3klj_A NAD(FAD)-dependent dehy 96.9 0.00052 1.8E-08 74.3 4.0 32 78-109 147-178 (385)
278 1cjc_A Protein (adrenodoxin re 96.9 0.005 1.7E-07 68.2 12.0 42 401-442 353-396 (460)
279 1o94_A Tmadh, trimethylamine d 96.9 0.00072 2.4E-08 79.4 5.5 44 399-443 659-702 (729)
280 1y56_A Hypothetical protein PH 96.8 0.0038 1.3E-07 69.7 10.9 35 406-440 342-376 (493)
281 1vg0_A RAB proteins geranylger 96.8 0.0011 3.8E-08 76.0 6.4 51 74-134 5-55 (650)
282 3lzw_A Ferredoxin--NADP reduct 96.8 0.0013 4.5E-08 68.4 6.3 89 78-230 155-249 (332)
283 4ap3_A Steroid monooxygenase; 96.7 0.0052 1.8E-07 69.6 10.8 32 78-109 192-223 (549)
284 1coy_A Cholesterol oxidase; ox 96.7 0.0011 3.9E-08 74.3 5.1 35 75-109 9-43 (507)
285 1n4w_A CHOD, cholesterol oxida 96.7 0.001 3.5E-08 74.6 4.6 54 181-234 229-291 (504)
286 2z3y_A Lysine-specific histone 96.6 0.0013 4.6E-08 76.2 5.6 34 76-109 106-139 (662)
287 2gag_A Heterotetrameric sarcos 96.6 0.0045 1.5E-07 74.9 10.0 86 79-229 286-381 (965)
288 2xve_A Flavin-containing monoo 96.6 0.0048 1.7E-07 68.3 9.3 32 78-109 198-229 (464)
289 2xag_A Lysine-specific histone 96.5 0.0019 6.7E-08 76.7 5.9 34 76-109 277-310 (852)
290 2gv8_A Monooxygenase; FMO, FAD 96.4 0.0049 1.7E-07 67.7 7.9 31 78-108 213-244 (447)
291 1lqt_A FPRA; NADP+ derivative, 96.4 0.0068 2.3E-07 67.0 9.1 32 78-109 148-200 (456)
292 1cjc_A Protein (adrenodoxin re 96.3 0.0023 7.9E-08 70.9 4.3 33 77-109 6-40 (460)
293 4a9w_A Monooxygenase; baeyer-v 96.2 0.0041 1.4E-07 65.1 5.4 37 406-442 313-353 (357)
294 1o94_A Tmadh, trimethylamine d 96.1 0.0052 1.8E-07 72.1 6.6 31 78-108 529-561 (729)
295 4fk1_A Putative thioredoxin re 96.1 0.0065 2.2E-07 62.9 6.3 88 78-230 147-235 (304)
296 3ayj_A Pro-enzyme of L-phenyla 95.7 0.0041 1.4E-07 72.3 3.2 50 407-456 644-697 (721)
297 1ps9_A 2,4-dienoyl-COA reducta 95.3 0.028 9.5E-07 65.2 8.1 28 78-105 495-522 (671)
298 4b63_A L-ornithine N5 monooxyg 95.1 0.078 2.7E-06 59.1 11.0 31 79-109 248-280 (501)
299 3h8l_A NADH oxidase; membrane 94.7 0.077 2.6E-06 57.2 9.2 50 174-230 219-269 (409)
300 1w4x_A Phenylacetone monooxyge 94.3 0.25 8.6E-06 55.5 12.4 32 78-109 187-218 (542)
301 3sx6_A Sulfide-quinone reducta 93.8 0.15 5E-06 55.7 9.1 49 399-447 289-350 (437)
302 3h28_A Sulfide-quinone reducta 93.5 0.11 3.9E-06 56.4 7.6 48 176-230 203-255 (430)
303 4gcm_A TRXR, thioredoxin reduc 93.5 0.039 1.3E-06 57.0 3.5 31 79-109 147-177 (312)
304 1lss_A TRK system potassium up 92.5 0.11 3.9E-06 46.3 4.7 32 78-109 5-36 (140)
305 2g1u_A Hypothetical protein TM 92.3 0.12 4E-06 47.8 4.7 32 78-109 20-51 (155)
306 3fwz_A Inner membrane protein 92.1 0.14 4.7E-06 46.5 4.8 31 79-109 9-39 (140)
307 3llv_A Exopolyphosphatase-rela 92.0 0.14 4.8E-06 46.2 4.7 31 79-109 8-38 (141)
308 1f0y_A HCDH, L-3-hydroxyacyl-C 91.1 0.18 6.1E-06 52.1 4.9 31 79-109 17-47 (302)
309 1id1_A Putative potassium chan 90.9 0.25 8.5E-06 45.3 5.3 30 79-108 5-34 (153)
310 3ic5_A Putative saccharopine d 90.6 0.21 7E-06 43.1 4.2 31 79-109 7-38 (118)
311 2hmt_A YUAA protein; RCK, KTN, 90.3 0.25 8.5E-06 44.2 4.6 31 79-109 8-38 (144)
312 3c85_A Putative glutathione-re 89.5 0.29 9.9E-06 46.3 4.6 31 79-109 41-72 (183)
313 1kyq_A Met8P, siroheme biosynt 88.0 0.3 1E-05 49.9 3.7 32 78-109 14-45 (274)
314 3ado_A Lambda-crystallin; L-gu 87.8 0.4 1.4E-05 50.1 4.5 31 79-109 8-38 (319)
315 3dfz_A SIRC, precorrin-2 dehyd 87.6 0.37 1.3E-05 47.7 3.9 31 78-108 32-62 (223)
316 3l4b_C TRKA K+ channel protien 87.3 0.42 1.4E-05 46.6 4.2 31 79-109 2-32 (218)
317 1jw9_B Molybdopterin biosynthe 87.2 0.43 1.5E-05 48.0 4.3 32 78-109 32-64 (249)
318 2bcg_G Secretory pathway GDP d 87.2 0.59 2E-05 51.1 5.7 36 74-109 8-43 (453)
319 1n4w_A CHOD, cholesterol oxida 87.1 0.56 1.9E-05 52.2 5.5 34 76-109 4-37 (504)
320 4e12_A Diketoreductase; oxidor 86.3 0.6 2.1E-05 47.7 4.9 31 79-109 6-36 (283)
321 1coy_A Cholesterol oxidase; ox 86.2 0.61 2.1E-05 51.9 5.3 53 182-234 235-296 (507)
322 3vtf_A UDP-glucose 6-dehydroge 86.2 0.67 2.3E-05 50.6 5.4 33 77-109 21-53 (444)
323 1d5t_A Guanine nucleotide diss 85.9 0.51 1.8E-05 51.3 4.3 35 75-109 4-38 (433)
324 1pzg_A LDH, lactate dehydrogen 85.7 0.68 2.3E-05 48.6 5.0 32 78-109 10-42 (331)
325 4dio_A NAD(P) transhydrogenase 85.5 0.58 2E-05 50.4 4.4 32 78-109 191-222 (405)
326 3p2y_A Alanine dehydrogenase/p 84.5 0.66 2.2E-05 49.6 4.2 32 78-109 185-216 (381)
327 2x5o_A UDP-N-acetylmuramoylala 84.4 0.53 1.8E-05 51.4 3.5 31 79-109 7-37 (439)
328 1d4d_A Flavocytochrome C fumar 84.2 0.35 1.2E-05 54.7 2.1 36 406-441 526-570 (572)
329 2a9f_A Putative malic enzyme ( 84.1 0.77 2.6E-05 49.1 4.5 33 77-109 188-221 (398)
330 1pjc_A Protein (L-alanine dehy 83.9 0.83 2.8E-05 48.5 4.7 32 78-109 168-199 (361)
331 4ffl_A PYLC; amino acid, biosy 83.8 1.1 3.7E-05 47.3 5.6 33 79-111 3-35 (363)
332 1jnr_A Adenylylsulfate reducta 83.8 0.78 2.7E-05 52.7 4.8 37 406-442 430-469 (643)
333 1lld_A L-lactate dehydrogenase 83.7 0.79 2.7E-05 47.4 4.4 31 78-108 8-40 (319)
334 2y0c_A BCEC, UDP-glucose dehyd 83.6 0.79 2.7E-05 50.7 4.5 32 78-109 9-40 (478)
335 3i83_A 2-dehydropantoate 2-red 83.5 0.81 2.8E-05 47.6 4.3 30 79-108 4-33 (320)
336 2ewd_A Lactate dehydrogenase,; 83.0 0.94 3.2E-05 47.1 4.6 31 78-108 5-36 (317)
337 2dpo_A L-gulonate 3-dehydrogen 82.7 0.94 3.2E-05 47.3 4.5 31 79-109 8-38 (319)
338 1x13_A NAD(P) transhydrogenase 82.6 0.91 3.1E-05 49.0 4.4 32 78-109 173-204 (401)
339 1bg6_A N-(1-D-carboxylethyl)-L 82.6 0.96 3.3E-05 47.4 4.5 31 78-108 5-35 (359)
340 3ghy_A Ketopantoate reductase 82.6 1.1 3.6E-05 47.0 4.9 30 79-108 5-34 (335)
341 3h8v_A Ubiquitin-like modifier 82.5 0.95 3.2E-05 46.6 4.3 32 78-109 37-69 (292)
342 3g17_A Similar to 2-dehydropan 82.4 0.94 3.2E-05 46.4 4.3 31 79-109 4-34 (294)
343 2v6b_A L-LDH, L-lactate dehydr 82.3 0.98 3.3E-05 46.7 4.4 31 79-109 2-34 (304)
344 1ks9_A KPA reductase;, 2-dehyd 82.2 0.99 3.4E-05 45.6 4.4 31 79-109 2-32 (291)
345 3hn2_A 2-dehydropantoate 2-red 82.2 0.83 2.8E-05 47.3 3.8 30 79-108 4-33 (312)
346 3lk7_A UDP-N-acetylmuramoylala 82.0 0.84 2.9E-05 50.0 4.0 32 78-109 10-41 (451)
347 3rui_A Ubiquitin-like modifier 81.9 1.1 3.7E-05 47.2 4.5 32 78-109 35-67 (340)
348 2ew2_A 2-dehydropantoate 2-red 81.9 1 3.6E-05 46.0 4.4 30 79-108 5-34 (316)
349 2eez_A Alanine dehydrogenase; 81.9 1.1 3.8E-05 47.6 4.7 32 78-109 167-198 (369)
350 1vg0_A RAB proteins geranylger 81.7 2.2 7.4E-05 48.9 7.3 56 173-228 378-434 (650)
351 2hjr_A Malate dehydrogenase; m 81.7 1 3.6E-05 47.1 4.4 32 78-109 15-47 (328)
352 2vvm_A Monoamine oxidase N; FA 81.5 2.2 7.4E-05 46.8 7.1 33 77-109 39-71 (495)
353 1nyt_A Shikimate 5-dehydrogena 81.3 1.1 3.9E-05 45.3 4.4 30 79-108 121-150 (271)
354 3gg2_A Sugar dehydrogenase, UD 81.2 1.1 3.7E-05 49.2 4.4 31 79-109 4-34 (450)
355 1l7d_A Nicotinamide nucleotide 81.2 1.1 3.8E-05 48.0 4.4 32 78-109 173-204 (384)
356 1vl6_A Malate oxidoreductase; 81.2 1.2 4.1E-05 47.6 4.6 33 77-109 192-225 (388)
357 1t2d_A LDH-P, L-lactate dehydr 81.2 1.3 4.4E-05 46.3 4.8 31 78-108 5-36 (322)
358 2raf_A Putative dinucleotide-b 80.7 1.2 4.2E-05 43.2 4.2 32 78-109 20-51 (209)
359 4a7p_A UDP-glucose dehydrogena 80.4 1.2 4.3E-05 48.6 4.5 32 78-109 9-40 (446)
360 2vhw_A Alanine dehydrogenase; 80.1 1.4 4.7E-05 47.1 4.7 32 78-109 169-200 (377)
361 1zcj_A Peroxisomal bifunctiona 80.1 1.1 3.8E-05 49.3 4.1 31 79-109 39-69 (463)
362 3oj0_A Glutr, glutamyl-tRNA re 80.0 0.61 2.1E-05 42.2 1.6 30 79-108 23-52 (144)
363 3k6j_A Protein F01G10.3, confi 79.9 1.3 4.4E-05 48.6 4.4 31 79-109 56-86 (460)
364 3l9w_A Glutathione-regulated p 79.6 1.6 5.5E-05 47.2 5.1 31 79-109 6-36 (413)
365 1zud_1 Adenylyltransferase THI 79.3 1.3 4.3E-05 44.6 3.8 32 78-109 29-61 (251)
366 1mv8_A GMD, GDP-mannose 6-dehy 78.9 1.2 4E-05 48.6 3.7 31 79-109 2-32 (436)
367 2e5v_A L-aspartate oxidase; ar 78.9 0.57 1.9E-05 51.7 1.2 46 395-441 318-369 (472)
368 3h5n_A MCCB protein; ubiquitin 78.7 1.6 5.4E-05 46.2 4.6 32 78-109 119-151 (353)
369 3g79_A NDP-N-acetyl-D-galactos 78.5 1.3 4.3E-05 49.0 3.8 32 78-109 19-52 (478)
370 3hwr_A 2-dehydropantoate 2-red 78.4 1.6 5.6E-05 45.2 4.5 30 78-108 20-49 (318)
371 1txg_A Glycerol-3-phosphate de 78.1 1.6 5.3E-05 45.3 4.3 30 79-108 2-31 (335)
372 3tl2_A Malate dehydrogenase; c 78.0 1.7 5.8E-05 45.2 4.5 31 78-108 9-40 (315)
373 3phh_A Shikimate dehydrogenase 77.8 1.8 6E-05 44.1 4.4 32 78-109 119-150 (269)
374 3ond_A Adenosylhomocysteinase; 77.6 1.7 5.7E-05 48.0 4.4 31 79-109 267-297 (488)
375 1pjq_A CYSG, siroheme synthase 77.5 1.6 5.6E-05 47.8 4.4 31 78-108 13-43 (457)
376 1p77_A Shikimate 5-dehydrogena 77.3 1.4 4.9E-05 44.6 3.6 31 78-108 120-150 (272)
377 4gsl_A Ubiquitin-like modifier 77.3 1.7 5.9E-05 49.1 4.5 33 77-109 326-359 (615)
378 1guz_A Malate dehydrogenase; o 77.3 1.8 6E-05 44.9 4.4 31 79-109 2-34 (310)
379 3doj_A AT3G25530, dehydrogenas 77.2 2 7E-05 44.3 4.8 32 78-109 22-53 (310)
380 3k96_A Glycerol-3-phosphate de 77.0 1.7 5.8E-05 46.0 4.2 32 78-109 30-61 (356)
381 3eag_A UDP-N-acetylmuramate:L- 76.8 1.8 6.2E-05 45.1 4.4 31 79-109 6-37 (326)
382 3ego_A Probable 2-dehydropanto 76.8 1.7 5.9E-05 44.8 4.2 29 79-108 4-32 (307)
383 1z82_A Glycerol-3-phosphate de 76.8 1.9 6.5E-05 45.0 4.5 31 78-108 15-45 (335)
384 1zej_A HBD-9, 3-hydroxyacyl-CO 76.8 1.9 6.4E-05 44.4 4.3 33 76-109 11-43 (293)
385 4g65_A TRK system potassium up 76.8 1 3.6E-05 49.4 2.6 31 79-109 5-35 (461)
386 3fi9_A Malate dehydrogenase; s 76.7 2.5 8.5E-05 44.5 5.3 32 77-108 8-42 (343)
387 2vns_A Metalloreductase steap3 76.7 2.2 7.6E-05 41.4 4.7 32 78-109 29-60 (215)
388 3tnl_A Shikimate dehydrogenase 76.5 2.2 7.4E-05 44.4 4.8 31 78-108 155-186 (315)
389 1a5z_A L-lactate dehydrogenase 76.4 1.8 6.1E-05 45.0 4.2 30 79-108 2-33 (319)
390 1y6j_A L-lactate dehydrogenase 76.4 2.1 7.3E-05 44.5 4.7 32 78-109 8-41 (318)
391 1ur5_A Malate dehydrogenase; o 76.3 2 6.9E-05 44.4 4.5 30 79-108 4-34 (309)
392 2egg_A AROE, shikimate 5-dehyd 76.3 1.8 6.2E-05 44.6 4.1 31 78-108 142-173 (297)
393 3mog_A Probable 3-hydroxybutyr 76.2 1.9 6.4E-05 47.7 4.5 31 79-109 7-37 (483)
394 3vh1_A Ubiquitin-like modifier 75.9 1.8 6.1E-05 48.9 4.1 32 78-109 328-360 (598)
395 3dtt_A NADP oxidoreductase; st 75.8 2.4 8.1E-05 42.1 4.7 32 78-109 20-51 (245)
396 1y8q_A Ubiquitin-like 1 activa 75.8 2 6.9E-05 45.3 4.4 32 78-109 37-69 (346)
397 3pid_A UDP-glucose 6-dehydroge 75.5 1.8 6.2E-05 47.1 4.0 31 78-109 37-67 (432)
398 1jay_A Coenzyme F420H2:NADP+ o 75.5 2.2 7.6E-05 40.9 4.3 31 79-109 2-33 (212)
399 3jyo_A Quinate/shikimate dehyd 75.4 2.2 7.4E-05 43.7 4.4 31 78-108 128-159 (283)
400 1tt5_B Ubiquitin-activating en 75.2 2.4 8.1E-05 46.2 4.8 32 78-109 41-73 (434)
401 1hyh_A L-hicdh, L-2-hydroxyiso 75.2 2 6.9E-05 44.3 4.1 30 79-108 3-34 (309)
402 3pef_A 6-phosphogluconate dehy 75.1 2.2 7.6E-05 43.3 4.4 31 79-109 3-33 (287)
403 3ojo_A CAP5O; rossmann fold, c 74.7 1.8 6.2E-05 47.1 3.7 32 78-109 12-43 (431)
404 1dlj_A UDP-glucose dehydrogena 74.7 1.7 5.8E-05 46.8 3.5 30 79-109 2-31 (402)
405 3u62_A Shikimate dehydrogenase 74.6 2.7 9.1E-05 42.3 4.7 31 79-109 110-141 (253)
406 3g0o_A 3-hydroxyisobutyrate de 74.5 2.3 7.9E-05 43.6 4.4 32 78-109 8-39 (303)
407 2rir_A Dipicolinate synthase, 74.2 2.6 8.9E-05 43.2 4.7 31 78-108 158-188 (300)
408 3don_A Shikimate dehydrogenase 74.1 2.1 7.3E-05 43.6 3.9 32 78-109 118-150 (277)
409 2i6t_A Ubiquitin-conjugating e 74.1 2.4 8E-05 43.9 4.3 31 78-108 15-47 (303)
410 3d4o_A Dipicolinate synthase s 73.7 2.7 9.4E-05 42.9 4.7 31 78-108 156-186 (293)
411 3hyw_A Sulfide-quinone reducta 73.6 11 0.00038 40.5 9.7 50 176-230 203-255 (430)
412 3gvi_A Malate dehydrogenase; N 73.4 2.8 9.7E-05 43.7 4.7 31 78-108 8-39 (324)
413 1oju_A MDH, malate dehydrogena 73.2 2.5 8.4E-05 43.6 4.1 30 79-108 2-33 (294)
414 3t4e_A Quinate/shikimate dehyd 73.2 3 0.0001 43.3 4.8 31 78-108 149-180 (312)
415 2q3e_A UDP-glucose 6-dehydroge 73.1 2.2 7.4E-05 46.9 3.9 32 78-109 6-39 (467)
416 2qyt_A 2-dehydropantoate 2-red 73.0 2.1 7.3E-05 43.8 3.7 31 78-108 9-45 (317)
417 1y8q_B Anthracycline-, ubiquit 72.9 2.6 8.9E-05 48.0 4.6 32 78-109 18-50 (640)
418 2f1k_A Prephenate dehydrogenas 72.9 2.8 9.4E-05 42.2 4.4 31 79-109 2-32 (279)
419 2hk9_A Shikimate dehydrogenase 72.6 2.6 9E-05 42.7 4.2 31 78-108 130-160 (275)
420 3qha_A Putative oxidoreductase 72.5 1.9 6.5E-05 44.2 3.1 32 78-109 16-47 (296)
421 1nvt_A Shikimate 5'-dehydrogen 72.3 2 6.9E-05 43.8 3.2 29 79-108 130-158 (287)
422 2uyy_A N-PAC protein; long-cha 72.2 3.6 0.00012 42.2 5.2 32 78-109 31-62 (316)
423 3ldh_A Lactate dehydrogenase; 72.2 2.8 9.4E-05 43.9 4.3 31 78-108 22-54 (330)
424 3pdu_A 3-hydroxyisobutyrate de 72.1 2.3 7.8E-05 43.2 3.6 31 79-109 3-33 (287)
425 1ez4_A Lactate dehydrogenase; 72.0 3.3 0.00011 43.1 4.8 32 77-108 5-38 (318)
426 3h2s_A Putative NADH-flavin re 72.0 3.4 0.00012 39.6 4.7 30 80-109 3-33 (224)
427 1ju2_A HydroxynitrIle lyase; f 72.0 1.8 6.1E-05 48.5 3.0 47 186-232 206-262 (536)
428 3cky_A 2-hydroxymethyl glutara 71.9 2.4 8.4E-05 43.1 3.8 32 78-109 5-36 (301)
429 4e21_A 6-phosphogluconate dehy 71.9 3 0.0001 44.2 4.5 33 77-109 22-54 (358)
430 3fbt_A Chorismate mutase and s 71.9 2.6 9E-05 43.1 3.9 32 78-109 123-155 (282)
431 3pwz_A Shikimate dehydrogenase 71.8 3.1 0.0001 42.3 4.4 31 78-108 121-152 (272)
432 3orq_A N5-carboxyaminoimidazol 71.8 4.6 0.00016 42.8 6.0 32 78-109 13-44 (377)
433 3pqe_A L-LDH, L-lactate dehydr 71.8 2.8 9.7E-05 43.8 4.3 31 78-108 6-38 (326)
434 3ew7_A LMO0794 protein; Q8Y8U8 71.7 3.5 0.00012 39.3 4.7 30 80-109 3-33 (221)
435 1evy_A Glycerol-3-phosphate de 71.6 1.7 5.9E-05 45.8 2.6 31 79-109 17-47 (366)
436 2qrj_A Saccharopine dehydrogen 71.5 3.1 0.00011 44.5 4.5 32 78-109 215-250 (394)
437 1yqg_A Pyrroline-5-carboxylate 71.5 2.9 0.0001 41.6 4.2 30 79-108 2-32 (263)
438 1lu9_A Methylene tetrahydromet 71.5 3.3 0.00011 42.1 4.6 30 79-108 121-151 (287)
439 2aef_A Calcium-gated potassium 71.3 1.5 5E-05 43.2 1.8 31 78-109 10-40 (234)
440 2h78_A Hibadh, 3-hydroxyisobut 71.2 2.5 8.6E-05 43.2 3.7 31 79-109 5-35 (302)
441 4dll_A 2-hydroxy-3-oxopropiona 71.1 2.8 9.6E-05 43.4 4.1 32 78-109 32-63 (320)
442 3o8q_A Shikimate 5-dehydrogena 71.0 3.2 0.00011 42.3 4.4 31 78-108 127-158 (281)
443 2wtb_A MFP2, fatty acid multif 70.9 2.6 8.9E-05 49.0 4.1 31 79-109 314-344 (725)
444 3p7m_A Malate dehydrogenase; p 70.9 3.6 0.00012 42.8 4.8 31 78-108 6-37 (321)
445 3e8x_A Putative NAD-dependent 70.8 3.6 0.00012 40.0 4.6 32 78-109 22-54 (236)
446 2dvm_A Malic enzyme, 439AA lon 70.8 4.3 0.00015 44.2 5.5 30 78-107 187-219 (439)
447 1hdo_A Biliverdin IX beta redu 70.8 3.9 0.00013 38.4 4.7 31 79-109 5-36 (206)
448 3k30_A Histamine dehydrogenase 70.6 2.6 9E-05 48.6 4.0 94 78-230 524-623 (690)
449 4huj_A Uncharacterized protein 70.5 2.2 7.7E-05 41.6 3.0 32 78-109 24-56 (220)
450 2g5c_A Prephenate dehydrogenas 70.4 3.4 0.00012 41.6 4.4 31 79-109 3-35 (281)
451 4aj2_A L-lactate dehydrogenase 70.3 3.4 0.00012 43.2 4.5 31 78-108 20-52 (331)
452 3d0o_A L-LDH 1, L-lactate dehy 70.3 3.5 0.00012 42.8 4.6 31 78-108 7-39 (317)
453 3ce6_A Adenosylhomocysteinase; 69.9 3.3 0.00011 45.8 4.4 31 79-109 276-306 (494)
454 3k31_A Enoyl-(acyl-carrier-pro 69.9 9 0.00031 38.9 7.6 30 79-108 32-64 (296)
455 2o3j_A UDP-glucose 6-dehydroge 69.8 2.5 8.5E-05 46.6 3.5 31 79-109 11-43 (481)
456 3c7a_A Octopine dehydrogenase; 69.5 2.2 7.6E-05 45.6 2.9 29 79-107 4-33 (404)
457 3l6d_A Putative oxidoreductase 69.5 3.7 0.00013 42.2 4.5 32 78-109 10-41 (306)
458 3vku_A L-LDH, L-lactate dehydr 69.5 3.4 0.00012 43.1 4.3 31 78-108 10-42 (326)
459 1leh_A Leucine dehydrogenase; 69.4 3.6 0.00012 43.7 4.4 31 78-108 174-204 (364)
460 4ezb_A Uncharacterized conserv 69.4 3.2 0.00011 43.0 4.0 31 79-109 26-57 (317)
461 2d5c_A AROE, shikimate 5-dehyd 69.1 3.9 0.00013 41.0 4.5 30 79-108 118-147 (263)
462 4gx0_A TRKA domain protein; me 69.1 4.1 0.00014 45.7 5.1 36 78-113 349-384 (565)
463 2izz_A Pyrroline-5-carboxylate 69.1 3.7 0.00013 42.6 4.4 32 78-109 23-58 (322)
464 1vpd_A Tartronate semialdehyde 68.9 3.1 0.00011 42.3 3.7 31 79-109 7-37 (299)
465 3gvp_A Adenosylhomocysteinase 68.7 3.7 0.00013 44.4 4.4 32 78-109 221-252 (435)
466 3c24_A Putative oxidoreductase 68.7 3.8 0.00013 41.5 4.4 31 79-109 13-44 (286)
467 2pv7_A T-protein [includes: ch 68.6 3.3 0.00011 42.5 3.8 31 79-109 23-54 (298)
468 3nep_X Malate dehydrogenase; h 68.6 3.7 0.00013 42.6 4.3 30 79-108 2-33 (314)
469 3q2o_A Phosphoribosylaminoimid 68.5 5.3 0.00018 42.4 5.7 31 79-109 16-46 (389)
470 3ius_A Uncharacterized conserv 68.4 3.6 0.00012 41.1 4.1 31 79-109 7-37 (286)
471 3gpi_A NAD-dependent epimerase 68.4 4.9 0.00017 40.2 5.1 31 79-109 5-35 (286)
472 1gpj_A Glutamyl-tRNA reductase 68.4 3.5 0.00012 44.3 4.2 31 78-108 168-199 (404)
473 1npy_A Hypothetical shikimate 68.3 3.3 0.00011 42.0 3.8 31 78-108 120-151 (271)
474 1pgj_A 6PGDH, 6-PGDH, 6-phosph 68.1 3.8 0.00013 45.1 4.5 31 79-109 3-33 (478)
475 2o7s_A DHQ-SDH PR, bifunctiona 68.1 3.5 0.00012 46.0 4.2 30 79-108 366-395 (523)
476 3o38_A Short chain dehydrogena 68.0 3.2 0.00011 41.3 3.6 31 79-109 24-56 (266)
477 1x0v_A GPD-C, GPDH-C, glycerol 67.9 2.7 9.1E-05 44.0 3.1 31 79-109 10-47 (354)
478 1yj8_A Glycerol-3-phosphate de 67.7 3 0.0001 44.1 3.5 31 79-109 23-60 (375)
479 3ggo_A Prephenate dehydrogenas 67.7 4.1 0.00014 42.1 4.4 32 78-109 34-67 (314)
480 2zyd_A 6-phosphogluconate dehy 67.6 3.8 0.00013 45.2 4.4 33 77-109 15-47 (480)
481 3qsg_A NAD-binding phosphogluc 67.6 3.8 0.00013 42.3 4.1 31 78-108 25-56 (312)
482 1ldn_A L-lactate dehydrogenase 67.5 3.8 0.00013 42.4 4.2 31 78-108 7-39 (316)
483 3vrd_B FCCB subunit, flavocyto 67.3 3.4 0.00011 43.9 3.8 42 187-230 215-257 (401)
484 1wdk_A Fatty oxidation complex 67.3 3.2 0.00011 48.2 3.8 31 79-109 316-346 (715)
485 1edz_A 5,10-methylenetetrahydr 67.2 3.1 0.00011 43.3 3.3 32 78-109 178-210 (320)
486 2gf2_A Hibadh, 3-hydroxyisobut 67.2 3.6 0.00012 41.7 3.8 31 79-109 2-32 (296)
487 2d4a_B Malate dehydrogenase; a 67.0 4.2 0.00014 42.0 4.3 29 80-108 2-31 (308)
488 3zwc_A Peroxisomal bifunctiona 66.7 3.7 0.00013 47.8 4.2 32 78-109 317-348 (742)
489 3d1l_A Putative NADP oxidoredu 66.6 4.3 0.00015 40.5 4.2 30 79-108 12-42 (266)
490 2we8_A Xanthine dehydrogenase; 66.5 4.7 0.00016 43.1 4.6 32 78-109 205-236 (386)
491 1tt5_A APPBP1, amyloid protein 66.1 4 0.00014 45.6 4.2 31 78-108 33-64 (531)
492 2p4q_A 6-phosphogluconate dehy 66.1 4.6 0.00016 44.7 4.6 32 78-109 11-42 (497)
493 2pgd_A 6-phosphogluconate dehy 66.0 4.4 0.00015 44.6 4.5 31 79-109 4-34 (482)
494 2cvz_A Dehydrogenase, 3-hydrox 65.9 3.4 0.00012 41.7 3.3 29 79-108 3-31 (289)
495 2dkn_A 3-alpha-hydroxysteroid 65.9 5.2 0.00018 39.0 4.6 30 80-109 4-34 (255)
496 1b37_A Protein (polyamine oxid 65.8 4.9 0.00017 43.7 4.8 55 174-230 207-269 (472)
497 3ek2_A Enoyl-(acyl-carrier-pro 65.4 17 0.00057 35.8 8.4 31 78-108 15-48 (271)
498 1i36_A Conserved hypothetical 65.2 4.4 0.00015 40.3 4.0 30 79-108 2-31 (264)
499 2rcy_A Pyrroline carboxylate r 64.9 5.2 0.00018 39.7 4.4 31 79-109 6-40 (262)
500 3ktd_A Prephenate dehydrogenas 64.9 5 0.00017 42.1 4.5 31 79-109 10-40 (341)
No 1
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=100.00 E-value=3.2e-138 Score=1182.26 Aligned_cols=576 Identities=47% Similarity=0.779 Sum_probs=530.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.+|||||||||+||++||++|++.|++|+|||++.+.++.++|+++.||.++++++++++++++.+..+.+..+++++++
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l 105 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKML 105 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeec
Confidence 35999999999999999999999999999999976678899999999999888999999999998888888888888888
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCCCce
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMSGKI 235 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~~~~ 235 (699)
+..++++++.++.++|+..|...|.+.+++.+|+++++++|++|..+ ++++++|.+.+|..+.|+.||+|||+|+++..
T Consensus 106 ~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~ 184 (637)
T 2zxi_A 106 NTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVI 184 (637)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEES-SSBEEEEEETTSCEEECSEEEECCTTCBTCEE
T ss_pred ccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEccCCCccCce
Confidence 88888999888888999999999999999877999999999999876 68899999999999999999999999999999
Q ss_pred eecccccCCCCcccccchhHHHHHHHcCCcccccccCcccccCCcccccccccccCCCCCccccccCCCcc------CCc
Q 048823 236 WVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPSRVDLRTVDFSGLEPQHGDEEVSWFSFDPDFH------IER 309 (699)
Q Consensus 236 ~~g~~~~~~gr~g~~~s~~L~~~L~~~G~~~~r~ktgtppr~~~~sid~~~~~~q~~d~~~~~fs~~~~~~------~~~ 309 (699)
+.|...++.|+.|+.++..++..|.++|+++.++++|+|||++.++|||+.++.|.+|..+.+|||..... ...
T Consensus 185 ~~G~~~~~~Gr~G~~~A~~la~~L~~lG~~v~~l~tgtppRi~~~sId~~~~~~q~~d~~~~~fs~~~~~~~~~~~~~~~ 264 (637)
T 2zxi_A 185 YIGDKMIPGGRLGEPRSEGLSDFYRRFDFPLIRFKTGTPARLDKRTIDFSALEVAPGDDPPPKFSFWTEPVGSYWFPKGK 264 (637)
T ss_dssp EETTEEEECSBTTBCCBCTHHHHHHHTTCCCEEEEEEECCEEEGGGCCCTTSEEECCCSSCBCSCSSSSSTTCSBCCTTC
T ss_pred eccceecCCCCCCchhHHHHHHHHHhcCCceEEecCCcCceecccccCHHHhccccCCCCCCCccccCCCcccccccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999975421 034
Q ss_pred cceeeeccCCChhHHHHHHhccccCCCCCCcccCCCCeeeeccccc---------------------------CCCCCCC
Q 048823 310 EQMCCYLTRTTKRTHQLIKDNLHETPTYGGWVEAKGPRYCPAIEDK---------------------------GFSTGLP 362 (699)
Q Consensus 310 ~~~~~~~~~t~~~~~~ii~~~~~~s~~~~g~i~~~g~ryc~siEdk---------------------------G~~tslp 362 (699)
+|++||+++|++++|+++++|++++++|.|.+.+.||||||||||| ||||+||
T Consensus 265 ~ql~c~~t~t~~~~~~ii~~~l~~~~~~~g~i~~~Gprycpsie~k~~rf~dk~~h~i~lepEg~~~~~~y~~G~stslp 344 (637)
T 2zxi_A 265 EQVNCWITYTTPKTHEIIRKNLHRTALYGGLIKGIGPRYCPSIEDKIVKFPDKERHQIFLEPEGLDTIEIYPNGLSTSLP 344 (637)
T ss_dssp CCCCEEEEECCHHHHHHHHHTC---------------CCCCSHHHHHHHCTTCSCCEEEEEECCSSCCEEEEETCCCCSC
T ss_pred cceeccccCccHHHHHHHHhcchhccccCccccccCCccCcchhhhhcccCCcccceeeeccccccCceeeecCCCCcCC
Confidence 7999999999999999999999999999999999999999999976 9999999
Q ss_pred HHHHHHHHhcccCCcCCccccccccccCCCcCccccCcccccCCCCCEEEecccCCCchHHHHHHHHHHHHHHHHHHhcC
Q 048823 363 ERLQLPLLRTLPGLENCSMLRPAYAVEYDYLPAHQCYRSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDG 442 (699)
Q Consensus 363 ~~~q~~~lr~ipgLe~a~i~r~gy~~eyd~i~p~~l~~~letk~i~gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~~~ 442 (699)
+++|.+++++|||||||+|+||||++||||++|.+|+++||+|.+||||||||||||+||+||++||++||+|||++++|
T Consensus 345 ~~~Q~~~~~~ipGle~a~~~r~Gy~ieyd~i~p~~l~~tLe~k~~~gLf~AGqinGt~GyeEAaaqGl~AG~nAa~~~~~ 424 (637)
T 2zxi_A 345 EEVQWEMYRSIPGLENVVLIRPAYAIEYDVVPPTELYPTLETKKIRGLFHAGNFNGTTGYEEAAGQGIVAGINAALRAFG 424 (637)
T ss_dssp HHHHHHHHTTSTTCTTCCEEECCEEEEEEECCGGGBCTTSBBSSSBTEEECGGGGTBCSHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhCcCcccceEeccccccccceEchhhcCccccccCCCCEEEeeecCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccCCccchhHHHHHhhhhcCCCCCCcccccChHHhhhhccCCCccccCchhhHhhCCCcHHHHHHHHHHHHHHHHHH
Q 048823 443 KSLIVLERESSYVGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEK 522 (699)
Q Consensus 443 ~~~~~~~r~~~~igvl~~dl~~~~~~~pyrm~tsr~e~rl~lr~dna~~rl~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 522 (699)
++|++|+|+++|||||||||||||++||||||||||||||+||+||||+||||+||++|||+++||+.|++|++.+++.+
T Consensus 425 ~~~~~~~r~~ayig~liddl~t~g~~epyrm~tsrae~rl~lr~dnad~rl~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 504 (637)
T 2zxi_A 425 KEPIYLRRDESYIGVMIDDLTTKGVTEPYRLFTSRSEYRLYIRQDNAILRLAKLGRELGLLSEEQYKLVKELEREIEKWK 504 (637)
T ss_dssp CCCCCCCTTTCHHHHHHHHHHHHCCSSCBCGGGCCCTTTTTSCSTTHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChhheehhhHHHHHhhcCCCchhhhcccHHHHHHHhccCChhhhhHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcccccchhhHHHHhhhcCCCCCCCCCHHHhhcCCCCCHHHHhc-cCCCCCCCCHHHHHHHHHHhcchHHHHHHHHH
Q 048823 523 RRLKTVRISGGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDK-HGFGNGLLSRAEKQCVEIDIKYEGFIVRQQSQ 601 (699)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ll~rp~v~~~~l~~-~~~~~~~~~~~~~~~ieie~kY~gYi~rq~~~ 601 (699)
++|++++++|. +.. + +...|++|+|+ |+|+|++|.. +.+. ..+++++.+++||++||+|||+||+++
T Consensus 505 ~~l~~~~~~~~--------~~~-~-~~~~~~~~~l~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~y~~~~~~~ 572 (637)
T 2zxi_A 505 EFYKSERVSVA--------VGG-D-TRSYSVATLMT-MNYTLDDVKEKFGYE-VPQHPYVKEEVEIQLKYEPYIERERKL 572 (637)
T ss_dssp HHHTTCEEEEE--------ETT-E-EEEEEHHHHTT-TTCCHHHHHHHHCCC-CCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCccCC--------CCC-C-CCcCCHHHHhC-CCCCHHHHHHhhCCc-cCCCHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999876 112 2 45679999999 9999999988 5454 357899999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCCCccHHHHHHhhccCCCCHHHHhcCCCCCHHHHHHHHHHHHh
Q 048823 602 LQQMVHQQHRPLPPDLDYYAMTTLSLESREKLSKVRPQTIGQASRVGGVSPADITALLIILEA 664 (699)
Q Consensus 602 i~~~~~~e~~~IP~~~dY~~i~~LS~E~rekL~~~rP~TlgqAsRI~GVtPa~i~~L~~~l~~ 664 (699)
|++++|+|+++||+||||+.|+|||+|+||||+++||.||||||||||||||||++|++||++
T Consensus 573 ~~~~~~~e~~~~p~~~~y~~~~~ls~e~~~kl~~~~p~~~~~a~ri~gv~p~~~~~l~~~~~~ 635 (637)
T 2zxi_A 573 NEKLKKLEDTKIPPDIDYDKIPGLTKEAREKLKKFKPITVGQASRIDGITPAAITALLVYLGK 635 (637)
T ss_dssp THHHHHHHTCBCCTTCCGGGCTTCCHHHHHHHHHHCCSBHHHHTTSTTCCHHHHHHHHHHTTC
T ss_pred HHHHHhhhCCCCcCCCCcccCCCcCHHHHHHHHhcCCCCHHHHhhCCCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999975
No 2
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=100.00 E-value=2.7e-138 Score=1187.23 Aligned_cols=588 Identities=47% Similarity=0.782 Sum_probs=458.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.+|||||||||+||++||++|++.|++|+|||++.+.++.++|+++.|+...++++++++.+++.+..+.+..+++++++
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 46999999999999999999999999999999976678899999999999988999999999988888888888888888
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCCCce
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMSGKI 235 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~~~~ 235 (699)
+..++++++.++.++|+..+...|.+.+++.+|+++++++|+++..+ ++++++|.+.+|.++.||.||+|||+|+.++.
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~~ 185 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLTVGTFLDGKI 185 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEES-SSBEEEEEETTSEEEEEEEEEECCSTTTCCEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEec-CCEEEEEEECCCCEEECCEEEEcCCCCccCcc
Confidence 88889999888889999999999999998867999999999999876 67899999999988999999999999999999
Q ss_pred eecccccCCCCcccccchhHHHHHHHcCCcccccccCcccccCCcccccccccccCCCCCccccccCCCccCCccceeee
Q 048823 236 WVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGTPSRVDLRTVDFSGLEPQHGDEEVSWFSFDPDFHIEREQMCCY 315 (699)
Q Consensus 236 ~~g~~~~~~gr~g~~~s~~L~~~L~~~G~~~~r~ktgtppr~~~~sid~~~~~~q~~d~~~~~fs~~~~~~~~~~~~~~~ 315 (699)
+.|...++.|+.|..++..++..|+++|+++.++++|+||+++.++|||+.++.|.+|..+.+|||........+|++||
T Consensus 186 i~G~~~~~~griGg~~a~eLA~~L~~lG~~v~~~~tgtpprid~~sId~~~~~~q~~d~~~~~fsf~~~~~~~~~q~~c~ 265 (651)
T 3ces_A 186 HIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQVPCY 265 (651)
T ss_dssp ECC-------------CCHHHHHHHTTTCCEEEECCEECCEEEGGGSCGGGSEEECCCSSCCCSSTTCCGGGSCCCCCEE
T ss_pred ccCcccCCCCCccchhhhHHHHHHHhcCCeEEEecCCCCCcccccccChHHheeeccCCCCCCCccCCCCCCcccceecc
Confidence 99999999999998899999999999999999999999999999999999999999999999999965421034799999
Q ss_pred ccCCChhHHHHHHhccccCCCCCCcccCCCCeeeeccccc---------------------------CCCCCCCHHHHHH
Q 048823 316 LTRTTKRTHQLIKDNLHETPTYGGWVEAKGPRYCPAIEDK---------------------------GFSTGLPERLQLP 368 (699)
Q Consensus 316 ~~~t~~~~~~ii~~~~~~s~~~~g~i~~~g~ryc~siEdk---------------------------G~~tslp~~~q~~ 368 (699)
++++++++|+++++|++++|+|.|.+.+.||||||||||| ||+|+||+++|.+
T Consensus 266 ~t~t~~~~~~ii~~~~~~~~~~~g~i~~~Gprycpsie~k~~rf~~k~~~~i~lepeg~~~~~~y~~G~st~lp~~~q~~ 345 (651)
T 3ces_A 266 ITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRYCPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQ 345 (651)
T ss_dssp EEECCHHHHHHHHHTGGGC---------------CCHHHHHHHSCSSSCCEEEEEESCTTCCEEEEETCCCCSCHHHHHH
T ss_pred eeCccHHHHHHHHhcccccCcccccccccCCcccccccccccccCCCccceeEeccccccCCeeeecCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999975 9999999999999
Q ss_pred HHhcccCCcCCccccccccccCCCcCccccCcccccCCCCCEEEecccCCCchHHHHHHHHHHHHHHHHHHhcCCCCccC
Q 048823 369 LLRTLPGLENCSMLRPAYAVEYDYLPAHQCYRSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKSLIVL 448 (699)
Q Consensus 369 ~lr~ipgLe~a~i~r~gy~~eyd~i~p~~l~~~letk~i~gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~~~~~~~~~ 448 (699)
++++|||||||+|+||||+|||||++|.+|+++||+|.+||||||||||||+||+|||+||++||+|||++++|++|+++
T Consensus 346 ~~~~ipGle~a~i~r~Gy~ieyd~i~p~~L~~tle~k~~~gLf~AGqinGttGYeEAaaqGl~AG~nAa~~~~~~~~~~~ 425 (651)
T 3ces_A 346 IVRSMQGMENAKIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAP 425 (651)
T ss_dssp HHHTSTTCTTCCEEECCEEEEEEEECGGGBCTTSBBSSSBTEEECSGGGTCCCHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHhhCCCccceEEEeccceeccCccchhhcCccccccCCCCeEEEEEecCCcChHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhHHHHHhhhhcCCCCCCcccccChHHhhhhccCCCccccCchhhHhhCCCcHHHHHHHHHHHHHHHHHHHHHhcc
Q 048823 449 ERESSYVGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRLKTV 528 (699)
Q Consensus 449 ~r~~~~igvl~~dl~~~~~~~pyrm~tsr~e~rl~lr~dna~~rl~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (699)
+|+++|||||||||+|||++||||||||||||||+||+||||+||||+|+++|||+++||+.|++|++.+++.+++|+++
T Consensus 426 ~r~~ayiG~liddl~t~g~~epyrm~tsrae~rl~lr~dnad~rl~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~l~~~ 505 (651)
T 3ces_A 426 ARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKST 505 (651)
T ss_dssp CTTTCHHHHHHHHHHHHSSCCCGGGHHHHHTTCSTTCGGGHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ChhhhhhhhHHHHHHHhcccchHHhhhhHHHHHHHhcccchhhhchHhHhHhCCCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccc-hhhHHHHhhhcCCCCCCCCCHHHhhcCCCCCHHHHhccCCCCCCCC-HHHHHHHHHHhcchHHHHHHHHHHHHHH
Q 048823 529 RISG-GDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGNGLLS-RAEKQCVEIDIKYEGFIVRQQSQLQQMV 606 (699)
Q Consensus 529 ~~~~-~~~~~~~~~~~~~~~~~~~s~~~ll~rp~v~~~~l~~~~~~~~~~~-~~~~~~ieie~kY~gYi~rq~~~i~~~~ 606 (699)
+++| ..|+..+..+...+.+...|++|+|+||+|+|++|..+.+....++ +++.+++||++||+|||+||+++|++++
T Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~~~~ 585 (651)
T 3ces_A 506 WVTPSAEAAAEVNAHLTAPLSREASGEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQL 585 (651)
T ss_dssp EECTTSTTHHHHHTTSSSCCSSCEEHHHHHTSTTCCHHHHTTSTTTCCCCSCHHHHHHHHHHHHTTC-------------
T ss_pred ccCchHHHHHHHHHhcCCcccccCCHHHHhCCCCCCHHHHHhhcCCccCCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9987 5677777777777788888999999999999999998755323578 9999999999999999999999999999
Q ss_pred HhcCCCCCCCCCCCCCCCccHHHHHHhhccCCCCHHHHhcCCCCCHHHHHHHHHHHHh
Q 048823 607 HQQHRPLPPDLDYYAMTTLSLESREKLSKVRPQTIGQASRVGGVSPADITALLIILEA 664 (699)
Q Consensus 607 ~~e~~~IP~~~dY~~i~~LS~E~rekL~~~rP~TlgqAsRI~GVtPa~i~~L~~~l~~ 664 (699)
|+|+++||+||||+.|+|||+|+||||+++||.||||||||||||||||++|++||++
T Consensus 586 ~~e~~~~p~~~~y~~~~~ls~e~~~kl~~~~p~~~~~a~ri~gv~p~~~~~l~~~~~~ 643 (651)
T 3ces_A 586 RNENTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKK 643 (651)
T ss_dssp ----------------------------------------------------------
T ss_pred HhhcCCCcCCCCcccCCCcCHHHHHHHHhcCCCCHHHHhhCCCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999986
No 3
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=100.00 E-value=5.3e-133 Score=1143.38 Aligned_cols=590 Identities=44% Similarity=0.726 Sum_probs=544.0
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHH
Q 048823 74 IDERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKR 153 (699)
Q Consensus 74 ~~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~ 153 (699)
+..+|||||||||+||++||++|++.|.+|+|||+..+.++.++|+++.|+++.++++++++.+++.+..+.+..+++|+
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~ 97 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFR 97 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchh
Confidence 34569999999999999999999999999999999766788899999999998899999999999888888888888888
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCCC
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMSG 233 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~~ 233 (699)
.++..++++++.++.++|+..+...+.+.+++.+|++++++.|+++..+ ++++.||.+.+|.++.||.||+|||+|+.+
T Consensus 98 ~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~ 176 (641)
T 3cp8_A 98 MLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTFLNG 176 (641)
T ss_dssp EECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTCBTC
T ss_pred hcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCCCCc
Confidence 8888888888888888999999999999999878999998899999876 678999999999999999999999999999
Q ss_pred ceeecccccCCCCc-ccccchhHHHHHHHcCCcccccccCcccccCCcccccccccccCCCCCccccccCCCccCCccce
Q 048823 234 KIWVGRTSMPAGRA-GESASHGLTENLQRLGFETDRLKTGTPSRVDLRTVDFSGLEPQHGDEEVSWFSFDPDFHIEREQM 312 (699)
Q Consensus 234 ~~~~g~~~~~~gr~-g~~~s~~L~~~L~~~G~~~~r~ktgtppr~~~~sid~~~~~~q~~d~~~~~fs~~~~~~~~~~~~ 312 (699)
.+++|...++.|+. |+.++..+++.|.++|+++.+++||+|||++.+++||+.++.|.+|..+.+|||........+++
T Consensus 177 ~i~~G~~~~~~g~~vG~~~a~~la~~L~~~G~kv~~l~tGtpprv~~~sid~~~~e~~~gd~~~~~fsf~~~~~p~~~~~ 256 (641)
T 3cp8_A 177 LIHIGMDHFPGGRSTAEPPVEGLTESLASLGFSFGRLKTGTPPRIDSRSVDYTIVTEQPGDVDPVPFSFSSTSVANRNLV 256 (641)
T ss_dssp EEEETTEEEECSSSTTSCCBCSHHHHHHHTTCCEEEEEEEECCEEEGGGSCTTTSEEECCCSSCCCSSSSCCCCGGGCCC
T ss_pred cceeeeeeeccccccCCchhhhhHHHHHhCCceEEeecCCCCcccCcccCChhhhhcccccccccccccccCCCCccccc
Confidence 99999998888999 99999999999999999999999999999999999999999999999989999965421035799
Q ss_pred eeeccCCChhHHHHHHhccccCCCCCCcccCCCCeeeeccccc---------------------------CCCCCCCHHH
Q 048823 313 CCYLTRTTKRTHQLIKDNLHETPTYGGWVEAKGPRYCPAIEDK---------------------------GFSTGLPERL 365 (699)
Q Consensus 313 ~~~~~~t~~~~~~ii~~~~~~s~~~~g~i~~~g~ryc~siEdk---------------------------G~~tslp~~~ 365 (699)
+||+++|+.++|.++.+|++.+|+|.|.+.+.||||||||||| ||||+||+++
T Consensus 257 ~C~~T~T~~~~h~II~~~~~~~p~~~g~isG~G~RycPsIedki~rf~d~~~~~~~lepe~~~~~~~~~~g~st~l~~~~ 336 (641)
T 3cp8_A 257 SCYLTKTTEKTHDILRTGFDRSPLFTGKVQGVGPRYCPSIEDKISRFPDKSSHHIFLEPEGTDTVEMYVNGFSTSLPEDI 336 (641)
T ss_dssp CEEEEECCHHHHHHHHTTTTTCTTCCC---------CCCSHHHHHHCCSCSCCEEEEEESSTTCCEEEEETCCCCSCHHH
T ss_pred ccccccCchhhhhHHhcCccccCCCCCcccCcCCccCcchhhhheeccCCCcceEEEecCCCCCCceecCCccccccHHH
Confidence 9999999999999999999999999999999999999999986 9999999999
Q ss_pred HHHHHhcccCCcCCccccccccccCCCcCccccCcccccCCCCCEEEecccCCCchHHHHHHHHHHHHHHHHHHhcCCCC
Q 048823 366 QLPLLRTLPGLENCSMLRPAYAVEYDYLPAHQCYRSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKSL 445 (699)
Q Consensus 366 q~~~lr~ipgLe~a~i~r~gy~~eyd~i~p~~l~~~letk~i~gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~~~~~~ 445 (699)
|.+++++|||||+|+|+||||++||+|++|.+|+++||+|.++|||||||++|++||+||++||++||.||+++++|++|
T Consensus 337 q~~~~~~i~gle~a~~~~~G~~~~y~~i~p~~l~~tle~k~~~gLf~AGqi~g~~Gy~eA~a~G~~AG~naa~~~~~~~~ 416 (641)
T 3cp8_A 337 QIAGLRSIPGLEEAKMIRPGYAIEYDFFHPWQIRSTMETRPVENLFFAGQINGTSGYEEAAAQGLMAGINAVRKILGKEL 416 (641)
T ss_dssp HHHHHTTSTTCTTCCEEECCEEEEEEEECGGGBCTTSBBSSSBTEEECSGGGTBCCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCcchhhceEecceeeecceEECHHHcCCcccccCcCCEEEEEeecCCccHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCccchhHHHHHhhhhcCCCCCCcccccChHHhhhhccCCCccccCchhhHhhCCCcHHHHHHHHHHHHHHHHHHHHH
Q 048823 446 IVLERESSYVGTLIDDLVTKDLREPYRMLTSRSEHRLLLRSDNADSRLTPLGRELGLIDDRRWKVYQDKLARVSEEKRRL 525 (699)
Q Consensus 446 ~~~~r~~~~igvl~~dl~~~~~~~pyrm~tsr~e~rl~lr~dna~~rl~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 525 (699)
++|+|+++|||||||||||+|++||||||||||||||+||+||||+||||+|+++|||+++||+.|++|++.+++.+++|
T Consensus 417 ~~~~r~~~y~g~l~~~l~~~g~~epyrm~tsrae~rl~lr~dna~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~l 496 (641)
T 3cp8_A 417 IVLGRDQAYIGVLIDDLITKETKEPYRMFTSSAEHRLILRHDNADLRLRKIGYDCNLVSSDDLHRTESIIKRVQHCLEVM 496 (641)
T ss_dssp CCCCTTTCHHHHHHHHHHHCCCSSCBCTTTCCCSCCGGGCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCChhhhHHHHHHHHHHhcCccchhhhccchHhhhhhhcccCcccCCCccccccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhhHHHHhhhcCCCCCCCCCHHHhhcCCCCCHHHHhccCCCC----CCC--CHHHHHHHHHHhcchHHHHHHH
Q 048823 526 KTVRISGGDLAADVTRLSGQPVKDSSTLESLLKKPHIQYEILDKHGFGN----GLL--SRAEKQCVEIDIKYEGFIVRQQ 599 (699)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ll~rp~v~~~~l~~~~~~~----~~~--~~~~~~~ieie~kY~gYi~rq~ 599 (699)
++++++|+.|+..+..+...+++...|++|+|+||+++|++|..+.+.. ..+ ++++.+++||++||+|||+||+
T Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~ 576 (641)
T 3cp8_A 497 KTAKVTPAEINTLLMNKGLQELKTPARALSLIKRPGISLQDILEHSLSVRSAAEELCNDPRVAEQVQIEIKYEGYIKREQ 576 (641)
T ss_dssp HHCCCCHHHHHHHHHHHTCCCCCSCCCCHHHHSSSSCCHHHHHTTCHHHHHHCCHHHHCHHHHHHHHHHHHTHHHHHHHH
T ss_pred hcCccChHHHHHHHHhhcCCccccccCHHHHhCCCCCCHHHHHhhCccccccccccCCCHHHHHHHHHHhhHHHHHHHHH
Confidence 9999988878888877777788888899999999999999999865431 235 7899999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCccHHHHHHhhccCCCCHHHHhcCCCCCHHHHHHHHHHHHh
Q 048823 600 SQLQQMVHQQHRPLPPDLDYYAMTTLSLESREKLSKVRPQTIGQASRVGGVSPADITALLIILEA 664 (699)
Q Consensus 600 ~~i~~~~~~e~~~IP~~~dY~~i~~LS~E~rekL~~~rP~TlgqAsRI~GVtPa~i~~L~~~l~~ 664 (699)
++|++++|+|+++||+||||+.|+|||+|+||||+++||.||||||||||||||||++|++||++
T Consensus 577 ~~~~~~~~~e~~~~p~~~~y~~~~~ls~e~~~kl~~~~p~~~~~a~ri~gv~p~~~~~l~~~~~~ 641 (641)
T 3cp8_A 577 LVADRIARLDSLHIPDNFNYDSLNSLSSEGREKLLKHRPATIGQASRILGVSPSDVSILMIRLGR 641 (641)
T ss_dssp HHHHHHHHHTTCCCCSSSCTTCCSSCCTTHHHHHHHHCCSSHHHHTTSTTSCHHHHHHHHTTC--
T ss_pred HHHHHHHhhcCCCCcCCCCcccCCCcCHHHHHHHHhcCCCCHHHHhhCCCCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999973
No 4
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=100.00 E-value=1.3e-67 Score=563.18 Aligned_cols=330 Identities=28% Similarity=0.393 Sum_probs=289.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeec---------ccccCCCCCCCCCCC----ccchhhHHHHhhcCccchh
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNI---------DKIAWQPCNPAVGGP----AKSQLVHEVDALGGEIGKV 144 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~---------~~~g~~~c~~s~Gg~----~~~~l~~el~~lg~~~~~~ 144 (699)
+||+|||||+||++||++|++.|++|+|+|++. +.+++++||+++||. +++.+.+|++++|+.+...
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~m~~~ 81 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSLVMEA 81 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCChHhhh
Confidence 689999999999999999999999999999863 778999999999998 8889999999999999998
Q ss_pred hchhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEE
Q 048823 145 ADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVV 224 (699)
Q Consensus 145 ~d~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VV 224 (699)
+|...+ |+++++ ++|+..|...+.+.++++|++++++.+|++|. ++.||
T Consensus 82 aD~~~i----------pAg~al--~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~-------------------~~~vI 130 (443)
T 3g5s_A 82 ADLARV----------PAGGAL--AVDREEFSGYITERLTGHPLLEVVREEVREIP-------------------PGITV 130 (443)
T ss_dssp HHHSEE----------CCTTEE--EECHHHHHHHHHHHHHTCTTEEEECSCCCSCC-------------------SSSEE
T ss_pred hhhcCC----------CCCccc--cCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc-------------------CCCEE
Confidence 887665 455555 68999999999999999999999998888773 35899
Q ss_pred EecCCCCCCceeecccccCCCCcccccchhHHHHHHHc-CCcccccccCcccccCCcccccccccccCCCCCccccccCC
Q 048823 225 LTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRL-GFETDRLKTGTPSRVDLRTVDFSGLEPQHGDEEVSWFSFDP 303 (699)
Q Consensus 225 lAtG~~~~~~~~~g~~~~~~gr~g~~~s~~L~~~L~~~-G~~~~r~ktgtppr~~~~sid~~~~~~q~~d~~~~~fs~~~ 303 (699)
+|||++ ++..|++.|+++ |++..||+||+|||++++||||++++.|.+.. +
T Consensus 131 iatG~~--------------------~s~~Ls~~L~~~tG~~~~~f~~~tpPrv~~~SId~~~~~~q~~~~--------~ 182 (443)
T 3g5s_A 131 LATGPL--------------------TSEALAEALKRRFGDHFLAYYDAASPIVLYESIDLTKCFRAGRYG--------Q 182 (443)
T ss_dssp ECCCTT--------------------CCHHHHHHHHHHHCGGGEEEEEEECCEEEGGGSCGGGCEECCCC----------
T ss_pred EeCCCC--------------------ccHHHHHHHHHhhCCCceeeccCCCCEeeCCcccHHHhhcccCCC--------C
Confidence 999997 489999999997 99999999999999999999999999998631 1
Q ss_pred CccCCccceeeeccCCChh--HHHH------HHhccccCCCCCCcccCCCCeeeecccc------c--------------
Q 048823 304 DFHIEREQMCCYLTRTTKR--THQL------IKDNLHETPTYGGWVEAKGPRYCPAIED------K-------------- 355 (699)
Q Consensus 304 ~~~~~~~~~~~~~~~t~~~--~~~i------i~~~~~~s~~~~g~i~~~g~ryc~siEd------k-------------- 355 (699)
..++++|++++++.. ++.+ +.++++++++|+| |||||| |
T Consensus 183 ----~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~G---------CpsIE~~a~rg~k~~rF~p~kp~gl~d 249 (443)
T 3g5s_A 183 ----SADYLNCPMTEEEYRRFHQALLEAQRHTPHDWEKLEFFEA---------CVPVEELARRGYQTLLFGPMKPVGLVD 249 (443)
T ss_dssp -------CEEEEECHHHHHHHHHHHHHCCBCCCC-------CTT---------CCCHHHHHHTCTTHHHHTTTCCTTCCB
T ss_pred ----CcccCCCCCChhHHHHHHHHHhccchhhhhccccCcccCC---------CcCHHHHhhcCCceeecCCCccccCCC
Confidence 135899999876542 3333 4456889999987 777766 1
Q ss_pred --------------------------CCCCCCCHHHHHHHHhcccCCcCCccccccccccCCCcC-ccccCcccccCCCC
Q 048823 356 --------------------------GFSTGLPERLQLPLLRTLPGLENCSMLRPAYAVEYDYLP-AHQCYRSLMTKKVE 408 (699)
Q Consensus 356 --------------------------G~~tslp~~~q~~~lr~ipgLe~a~i~r~gy~~eyd~i~-p~~l~~~letk~i~ 408 (699)
||||+|||++|++++|+|||||+|+|+||||++||||++ |.+|+++||+|.++
T Consensus 250 ~~~~~~p~a~v~LepE~~~~~~~y~~GfsTsLp~~~Q~~~~r~IpGLE~a~~~r~G~~~ey~~i~sP~~L~~tle~k~~~ 329 (443)
T 3g5s_A 250 PRTGKEPFAVVQLRQEDKAGRMWSLVGFQTGLKWPEQKRLIQMIPGLENAEIVRYGVMHRNTYLNAPRLLGETLEFREAE 329 (443)
T ss_dssp TTTTBCCSEEEEEEECSTTSCEEEETTCCCCBCHHHHHHHHTTSTTCTTCCEEECCEEEEEEEECHHHHBCTTSEETTEE
T ss_pred cccCCccceEEEEeecCCCCCEEeCCceecCCCHHHHHHHHhcCcChhhCeeeeCcEeecCceecChhHhChhceecCCC
Confidence 999999999999999999999999999999999999999 99999999999999
Q ss_pred CEEEecccCCCchHHHHHHHHHHHHHHHHHHhcCCCCccCCccchhHHHHHhhhhcCCCCCCcccccChHHhhhh
Q 048823 409 GLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKSLIVLERESSYVGTLIDDLVTKDLREPYRMLTSRSEHRLL 483 (699)
Q Consensus 409 gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~~~~~~~~~~r~~~~igvl~~dl~~~~~~~pyrm~tsr~e~rl~ 483 (699)
|||||||++|++||+||++||++||+||+++++|++|++++|+ +|||||||||++...+...+|-.+ |.|+
T Consensus 330 ~Lf~AGqi~G~~Gy~eAaa~Gl~AG~naa~~~~g~~p~~l~r~-~yiGvLiddl~~~~~~~fqpm~~n---fgl~ 400 (443)
T 3g5s_A 330 GLYAAGVLAGVEGYLESAATGFLAGLNAARKALGLPPVAPPEE-SMLGGLVRYLATANPEGFQPMYAN---WGLV 400 (443)
T ss_dssp EEEECGGGGTBCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCTT-SHHHHHHHHHHHSCCTTCCCBCCC---GGGS
T ss_pred CEEECccccccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCChh-hhhhHHHHHhhcCCccCCCCCCcc---cccC
Confidence 9999999999999999999999999999999999999999997 599999999999888999999999 9954
No 5
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.89 E-value=2.1e-22 Score=204.59 Aligned_cols=174 Identities=29% Similarity=0.443 Sum_probs=143.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
+|||+|||||++|+++|+.|++.|.+|+|||++.+..| ++|++..++....++.++++ +
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G-~~~~~~~~~~~~~~~~~~~~----------d---------- 61 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM-MPFLPPKPPFPPGSLLERAY----------D---------- 61 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT-CCSSCCCSCCCTTCHHHHHC----------C----------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC-cccCccccccchhhHHhhhc----------c----------
Confidence 58999999999999999999999999999999866777 88988877665555555442 0
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCCCcee
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMSGKIW 236 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~~~~~ 236 (699)
..++ ++..+...+.+.+++.+++++++++|+++..+ ++++++|.+.+|.++.||.||+|+|.++..+.+
T Consensus 62 -~~g~---------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~ 130 (232)
T 2cul_A 62 -PKDE---------RVWAFHARAKYLLEGLRPLHLFQATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFLGARLF 130 (232)
T ss_dssp -TTCC---------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCSSCEEE
T ss_pred -CCCC---------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCChhhcee
Confidence 1121 66788899999998877999998899999876 677888999999889999999999999999999
Q ss_pred ecccccCCCCcccccchhHHHHHHHcCCcccccc------cCcccccCCccccccc
Q 048823 237 VGRTSMPAGRAGESASHGLTENLQRLGFETDRLK------TGTPSRVDLRTVDFSG 286 (699)
Q Consensus 237 ~g~~~~~~gr~g~~~s~~L~~~L~~~G~~~~r~k------tgtppr~~~~sid~~~ 286 (699)
.|......|+.|..++..|++.|.+.|+.+.|.+ +|+|| ++++|+.
T Consensus 131 ~G~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~----~~~~~~~ 182 (232)
T 2cul_A 131 LGGVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPG----YRVRYLA 182 (232)
T ss_dssp ETTEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CC----EEEEEEE
T ss_pred cCCccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCC----ccCchhh
Confidence 9999999999999999999999999999988877 56666 3555543
No 6
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.87 E-value=3.6e-22 Score=220.47 Aligned_cols=329 Identities=15% Similarity=0.184 Sum_probs=173.5
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeeccc------ccCCCCCCCCCCCccc-------hhhH-HHHhhcCc
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDK------IAWQPCNPAVGGPAKS-------QLVH-EVDALGGE 140 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~------~g~~~c~~s~Gg~~~~-------~l~~-el~~lg~~ 140 (699)
+.++||+|||||++|+++|+.|++.|.+|+|+|++... .+...|+......... .+.. .+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 45699999999999999999999999999999996221 1233444222111100 1111 11111000
Q ss_pred -cchhhchhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEE
Q 048823 141 -IGKVADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNF 218 (699)
Q Consensus 141 -~~~~~d~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i 218 (699)
...+.+..++.+. ....+. .+ + ..+...+.+.|.+.+++. |++++ +++|+++..+ ++ .+.|.+.+| ++
T Consensus 105 ~~~~~~~~~Gi~~~--~~~~g~-~~-~--~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~~-~~-~~~V~~~~g-~i 174 (417)
T 3v76_A 105 DFVALVERHGIGWH--EKTLGQ-LF-C--DHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVERT-AS-GFRVTTSAG-TV 174 (417)
T ss_dssp HHHHHHHHTTCCEE--ECSTTE-EE-E--SSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEEE-TT-EEEEEETTE-EE
T ss_pred HHHHHHHHcCCCcE--EeeCCE-Ee-e--CCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEEe-CC-EEEEEECCc-EE
Confidence 0000000010000 001111 11 1 346678888999999887 88887 6999999875 33 477888888 89
Q ss_pred ecCeEEEecCCCCCCceeecccccCCCCcccccchhHHHHHHHcCCcccccccCc------------ccccCCcccc---
Q 048823 219 YAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGT------------PSRVDLRTVD--- 283 (699)
Q Consensus 219 ~Ad~VVlAtG~~~~~~~~~g~~~~~~gr~g~~~s~~L~~~L~~~G~~~~r~ktgt------------ppr~~~~sid--- 283 (699)
.||.||+|||+++... .|..|+ ... .++.+|..+..+.... ...+.+-+++
T Consensus 175 ~ad~VIlAtG~~S~p~---------~gs~g~--g~~---la~~~G~~i~~~~p~l~~~~~~~~~~~~~~~l~G~~~~~~~ 240 (417)
T 3v76_A 175 DAASLVVASGGKSIPK---------MGATGL--AYR---IAEQFGLPVVETRPALVPLTLDQAQLAKLGALAGVAADAEA 240 (417)
T ss_dssp EESEEEECCCCSSCGG---------GTCCCH--HHH---HHHHTTCCEEEEEEESCCEECCHHHHHHTGGGTTCEEEEEE
T ss_pred EeeEEEECCCCccCCC---------CCCCcH--HHH---HHHHCCCCEecccceeeeEEecCccccccccCCCCceeEEE
Confidence 9999999999986211 122211 112 2245565532221110 0111111211
Q ss_pred --------cccccccCCCCCccccccCCCccCC-ccceeeeccCCChhHH-HHHHhccccCCCCCCcccCCCCeeeeccc
Q 048823 284 --------FSGLEPQHGDEEVSWFSFDPDFHIE-REQMCCYLTRTTKRTH-QLIKDNLHETPTYGGWVEAKGPRYCPAIE 353 (699)
Q Consensus 284 --------~~~~~~q~~d~~~~~fs~~~~~~~~-~~~~~~~~~~t~~~~~-~ii~~~~~~s~~~~g~i~~~g~ryc~siE 353 (699)
-+.++...|.+.|..++.+...... .-.+.+.-..+.++.. +....+..++ ..+.+......++++.+.
T Consensus 241 ~~~~~~~~~~~lft~~G~sGp~il~~S~~~~~~~~~~id~~p~~~~~~~~~~~~~~~~~~~-~~~~l~~~lp~~~~~~~~ 319 (417)
T 3v76_A 241 RFGKAAFREAVLITHRGLSGPAILQISSYWREGEEIVLRLMPDIDIASILKGMRRANGRQA-VQTALADILPRRLAQFFA 319 (417)
T ss_dssp EETTEEEEEEEEECSSEEESHHHHHHTTTCCTTCCEEEEESTTSCHHHHHHHHHHHTCSSB-HHHHHTTTSCHHHHHHHH
T ss_pred EECCEeeeeeeEEECCCcchHHHHHHHHHhhCCCEEEEECCCCCCHHHHHHHHHHhchhhh-HHHHHHHHhhHHHHHHHH
Confidence 1122223344455444443321100 1122322222222211 1112222221 111111123445665543
Q ss_pred cc-CC----CCCCCHHHHHHHHhccc----------CCcCCccccccccccCCCcCccccC-cccccCCCCCEEEecccC
Q 048823 354 DK-GF----STGLPERLQLPLLRTLP----------GLENCSMLRPAYAVEYDYLPAHQCY-RSLMTKKVEGLFFSGQIN 417 (699)
Q Consensus 354 dk-G~----~tslp~~~q~~~lr~ip----------gLe~a~i~r~gy~~eyd~i~p~~l~-~~letk~i~gLf~AGqi~ 417 (699)
+. ++ ...++..+..++...+. |+++|+++++|+ +..+++ .|||+|.+||||||||+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GGV-------~~~ei~~~tmesk~~~gLy~aGE~l 392 (417)
T 3v76_A 320 DEAKLTGRMLADLSDKTIDALASSIQVWAVKPAGSEGYRTAEVTLGGV-------DTRALDSRTMQAKEVPGLYFVGECV 392 (417)
T ss_dssp HHTTCTTCBGGGCCHHHHHHHHHHHHSEEECCCEECCTTTCSEEEEEE-------CGGGBCTTTCBBTTSTTEEECGGGB
T ss_pred HhcCCCCCchhhCCHHHHHHHHHHhcCCEEEecccCCcceEEEeCCCC-------ccccCChhhccccCCCCeEEEEEeE
Confidence 22 22 22456666666654433 999999999883 344555 789999999999999988
Q ss_pred CC----chHH--HHHHHHHHHHHH
Q 048823 418 GT----TGYE--EAAAQGIISGIN 435 (699)
Q Consensus 418 G~----~Gy~--eA~a~G~~Ag~n 435 (699)
++ .||+ +||++|++||.+
T Consensus 393 D~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 393 DVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp SEEECSSSHHHHHHHHHHHHHHHH
T ss_pred ecccCCCCHHHHHHHHHHHHHhCc
Confidence 77 6775 999999999975
No 7
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.81 E-value=6.6e-19 Score=193.50 Aligned_cols=329 Identities=12% Similarity=0.102 Sum_probs=168.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeeccc------ccCCCCCCCCCCCccc-------hhhHH-HHhhcCc-
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDK------IAWQPCNPAVGGPAKS-------QLVHE-VDALGGE- 140 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~------~g~~~c~~s~Gg~~~~-------~l~~e-l~~lg~~- 140 (699)
.+|||+|||||++|+++|+.|++.|.+|+|+|++... .+...||....+.... .+... +..+...
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 82 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWD 82 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHH
Confidence 3589999999999999999999999999999996211 1234565433221111 11111 1000000
Q ss_pred cchhhchhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCC--CCEEEEEEcCccE
Q 048823 141 IGKVADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKN--DNVEGVCTFFGMN 217 (699)
Q Consensus 141 ~~~~~d~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~--g~v~gV~t~dG~~ 217 (699)
...+....++.+.. ...+ ..+ +. . +...+...|.+.+++. |++++ ++.|+++..+++ +..+.|.+.+| +
T Consensus 83 ~~~~~~~~Gi~~~~--~~~g-~~~-p~-~-~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~ 154 (401)
T 2gqf_A 83 FISLVAEQGITYHE--KELG-QLF-CD-E-GAEQIVEMLKSECDKY-GAKILLRSEVSQVERIQNDEKVRFVLQVNST-Q 154 (401)
T ss_dssp HHHHHHHTTCCEEE--CSTT-EEE-ET-T-CTHHHHHHHHHHHHHH-TCEEECSCCEEEEEECCSCSSCCEEEEETTE-E
T ss_pred HHHHHHhCCCceEE--CcCC-EEc-cC-C-CHHHHHHHHHHHHHHC-CCEEEeCCEEEEEEcccCcCCCeEEEEECCC-E
Confidence 00000001111000 0011 111 11 1 5667888888888886 88987 699999986411 22356888777 7
Q ss_pred EecCeEEEecCCCCCCceeecccccCCCCcccccchhHHHHHHHcCCcccccccCc-cccc----------CCcccc---
Q 048823 218 FYAPSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTENLQRLGFETDRLKTGT-PSRV----------DLRTVD--- 283 (699)
Q Consensus 218 i~Ad~VVlAtG~~~~~~~~~g~~~~~~gr~g~~~s~~L~~~L~~~G~~~~r~ktgt-ppr~----------~~~sid--- 283 (699)
++||.||+|||+++... .|..|+. ..+ .+.+|..+.....+. +..+ ...++.
T Consensus 155 i~ad~VVlAtG~~s~p~---------~g~~G~g--~~l---a~~~G~~i~~~~p~l~~~~~~~~~~~~~~l~g~~~~~~~ 220 (401)
T 2gqf_A 155 WQCKNLIVATGGLSMPG---------LGATPFG--YQI---AEQFGIPVIPPRASLVPFTYRETDKFLTALSGISLPVTI 220 (401)
T ss_dssp EEESEEEECCCCSSCGG---------GTCCSHH--HHH---HHHTTCCEEEEEEESCCEECCGGGGGGGGGTTCEEEEEE
T ss_pred EECCEEEECCCCccCCC---------CCCChHH--HHH---HHHCCCCcccCcceeeceecCCchhhcccCCCeeeeeEE
Confidence 99999999999986321 1222221 222 244555432111110 0000 000000
Q ss_pred -c--------ccccccCCCCCccccccCCCccCCccceeeec-cCCChhHHHHH---H-hccccCCCCCCcccC-CCCee
Q 048823 284 -F--------SGLEPQHGDEEVSWFSFDPDFHIEREQMCCYL-TRTTKRTHQLI---K-DNLHETPTYGGWVEA-KGPRY 348 (699)
Q Consensus 284 -~--------~~~~~q~~d~~~~~fs~~~~~~~~~~~~~~~~-~~t~~~~~~ii---~-~~~~~s~~~~g~i~~-~g~ry 348 (699)
. +-++...|-+.|..+.++..... ...+..-+ ...+ ..+++ + .+..++ +...+.. ...++
T Consensus 221 ~i~G~~~~~g~~l~t~~g~sG~~~l~~s~~~~~-~~~~~i~~~p~~~--~~~~~~~~~~~~~~~~--~~~~l~~~lp~~~ 295 (401)
T 2gqf_A 221 TALCGKSFYNQLLFTHRGISGPAVLQISNYWQP-TESVEIDLLPNHN--VEEEINQAKQSSPKQM--LKTILVRLLPKKL 295 (401)
T ss_dssp EETTSCEEEEEEEECSSEEESHHHHHHTTTCCT-TCCEEEESCSSSC--HHHHHHHHHHHCTTSB--HHHHHTTTSCHHH
T ss_pred EEcCCceEEeCEEEECCCccHHHHHHHHHHHhc-CCEEEEECCCCCC--HHHHHHHHhhhccccc--HHHHhhhhcCHHH
Confidence 0 00000011122222222211100 01111111 1111 12222 2 221111 0001111 12233
Q ss_pred eecc-cccCCC----CCCCHHHHHHHHhccc----------CCcCCccccccccccCCCcCccccC-cccccCCCCCEEE
Q 048823 349 CPAI-EDKGFS----TGLPERLQLPLLRTLP----------GLENCSMLRPAYAVEYDYLPAHQCY-RSLMTKKVEGLFF 412 (699)
Q Consensus 349 c~si-EdkG~~----tslp~~~q~~~lr~ip----------gLe~a~i~r~gy~~eyd~i~p~~l~-~~letk~i~gLf~ 412 (699)
.+.+ +..|+. ..++.++..++...+. +++++.++..|+. ..+++ .|||+|.+|||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~g~~~~~~a~vt~GGv~-------~~~~~~~tmes~~~~gly~ 368 (401)
T 2gqf_A 296 VELWIEQGIVQDEVIANISKVRVKNLVDFIHHWEFTPNGTEGYRTAEVTMGGVD-------TKVISSKTMESNQVSGLYF 368 (401)
T ss_dssp HHHHHHTTSSCCCBGGGCCHHHHHHHHHHHHCEEECCSEECCTTTCSEEEEEEC-------GGGBCTTTCBBSSSTTEEE
T ss_pred HHHHHHHcCCCCCchhhCCHHHHHHHHHHHhcCEEEecccCCcceeEEeCCccc-------cccCChhhccccCCCCEEE
Confidence 3332 223443 4577777777766552 7788888777753 56677 9999999999999
Q ss_pred ecccCCC----chHH--HHHHHHHHHHHHHHH
Q 048823 413 SGQINGT----TGYE--EAAAQGIISGINAAR 438 (699)
Q Consensus 413 AGqi~G~----~Gy~--eA~a~G~~Ag~naa~ 438 (699)
|||+.++ .||+ +||++|++||.+|+.
T Consensus 369 ~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 369 IGEVLDVTGWLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp CGGGBSCEECTTTHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeEEeccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999988 6675 999999999999863
No 8
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.77 E-value=6.1e-18 Score=192.08 Aligned_cols=87 Identities=17% Similarity=0.170 Sum_probs=69.7
Q ss_pred CCCCCCCHHHHHHHHhcccCCcCCc-----cccccccccCCCcCc--cccCcccccCCCCCEEEecccCCC-chHHHHHH
Q 048823 356 GFSTGLPERLQLPLLRTLPGLENCS-----MLRPAYAVEYDYLPA--HQCYRSLMTKKVEGLFFSGQINGT-TGYEEAAA 427 (699)
Q Consensus 356 G~~tslp~~~q~~~lr~ipgLe~a~-----i~r~gy~~eyd~i~p--~~l~~~letk~i~gLf~AGqi~G~-~Gy~eA~a 427 (699)
.++..||..+...+..+++.|++.- --..-|++|..+..| ...+++||+..++|||.|||..|. .|+..|++
T Consensus 450 ~l~~~~p~~~~~~l~e~~~~~~~~~~g~~~~~~~l~g~e~~~ssp~ri~~~~~~~~~~~~gly~~GegaG~a~gi~~Aa~ 529 (549)
T 3nlc_A 450 DLSKALPPFAVEAIREAIPAFDRKIKGFASEDGLLTGVETRTSSPVCIKRGKDFQSVNLKGFYPAGEGAGYAGGILSAGI 529 (549)
T ss_dssp CGGGTSCHHHHHHHHHHHHHHHTTSTTTTCTTCEEEEEECCSSCSEECCCTTTTSCTTCBTEEECHHHHTSCCSHHHHHH
T ss_pred chhHhCcHHHHHHHHHHHHHhhccCcCCCCCCcEEEEEeeccCCceeEEECCCceECCcCCEEEccccCChhhHHHHHHH
Confidence 6888899998888876655554321 002336899999888 467899999779999999999997 89999999
Q ss_pred HHHHHHHHHHHHhcC
Q 048823 428 QGIISGINAARHSDG 442 (699)
Q Consensus 428 ~G~~Ag~naa~~~~~ 442 (699)
+|+.||..++.++.+
T Consensus 530 ~G~~~a~~i~~~~~~ 544 (549)
T 3nlc_A 530 DGIKVAEAVARDIVA 544 (549)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999988653
No 9
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.71 E-value=3.3e-17 Score=182.42 Aligned_cols=147 Identities=22% Similarity=0.238 Sum_probs=90.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeeccc------ccCCCCCCCCCCCccchhhHH-HHhhcC---ccch--
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDK------IAWQPCNPAVGGPAKSQLVHE-VDALGG---EIGK-- 143 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~------~g~~~c~~s~Gg~~~~~l~~e-l~~lg~---~~~~-- 143 (699)
.++||+|||||++|+++|+.|++.|.+|+|||+.... .+...|+...... ..+ +..++. +...
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 99 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLP-----LDEIVKHIPGNGRFLYSAF 99 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSC-----HHHHHHTCTBTGGGGHHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCccc-----HHHHHHHhccChHHHHHHH
Confidence 3589999999999999999999999999999986211 1222343221111 111 111110 0000
Q ss_pred -hhchhhhhHHhhccCCCc------cccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc
Q 048823 144 -VADMCYLQKRVLNTSRGP------AVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG 215 (699)
Q Consensus 144 -~~d~~~i~~~~~~~s~g~------~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG 215 (699)
..+. .....++.. .|. ..+..........+...|.+.+++. |++++ +++|+++..+ ++++++|.+.+|
T Consensus 100 ~~~~~-~~~~~~~~~-~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~-GV~i~~~~~V~~i~~~-~~~v~~V~~~~G 175 (447)
T 2i0z_A 100 SIFNN-EDIITFFEN-LGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDL-GVKIRTNTPVETIEYE-NGQTKAVILQTG 175 (447)
T ss_dssp HHSCH-HHHHHHHHH-TTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TTEEEEEEETTC
T ss_pred HhcCH-HHHHHHHHh-cCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHC-CCEEEeCcEEEEEEec-CCcEEEEEECCC
Confidence 0000 000111110 010 0000000124567888899988885 89987 6999999876 677899999999
Q ss_pred cEEecCeEEEecCCCC
Q 048823 216 MNFYAPSVVLTTGTFM 231 (699)
Q Consensus 216 ~~i~Ad~VVlAtG~~~ 231 (699)
.+++||.||+|||+++
T Consensus 176 ~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 176 EVLETNHVVIAVGGKS 191 (447)
T ss_dssp CEEECSCEEECCCCSS
T ss_pred CEEECCEEEECCCCCc
Confidence 7899999999999996
No 10
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.59 E-value=1.2e-14 Score=152.83 Aligned_cols=113 Identities=23% Similarity=0.192 Sum_probs=79.3
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
+++|||+|||||+||++||+.|++.|++|+|+|++ . .||.... ...++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~--~---------~gg~~~~-------~~~~~~------------- 52 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN--T---------NRNRVTQ-------NSHGFI------------- 52 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS--C---------CGGGGSS-------CBCCST-------------
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC--C---------CCCeeee-------ecCCcc-------------
Confidence 45799999999999999999999999999999984 1 1110000 000000
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
. .....+..+.....+.+.+++++.++...++.+... +...+.|.+.+|.++.+|.||+|||+.
T Consensus 53 --------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 53 --------T---RDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQ-STGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp --------T---CTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEEC-TTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred --------C---CCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeec-CCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 0 002345566666677777777888888777777654 445567888999999999999999974
No 11
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.57 E-value=7.7e-14 Score=160.79 Aligned_cols=61 Identities=21% Similarity=0.195 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE---cCcc--EEecCeEEEecCCCCCC
Q 048823 172 KREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT---FFGM--NFYAPSVVLTTGTFMSG 233 (699)
Q Consensus 172 ~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t---~dG~--~i~Ad~VVlAtG~~~~~ 233 (699)
...+...|.+.+.+.++++++ ++.|++|..+ +++++||.+ .+|+ .+.|+.||+|||+++..
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 457888888888887559997 5999999886 678888864 4676 78999999999999754
No 12
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.56 E-value=2.1e-14 Score=151.04 Aligned_cols=119 Identities=19% Similarity=0.251 Sum_probs=78.6
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
.+.|||+|||||+||++||+.|+++|++|+|+|+.. .+. .|. .|.+.....+ . +.
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~--~gg-~~~--~G~~~~~~~i----------~---~~------- 56 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM--AGG-VAA--GGQLTTTTII----------E---NF------- 56 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS--GGG-CCT--TCGGGGSSEE----------C---CS-------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC--CCC-ccc--CCCcCChHHh----------h---hc-------
Confidence 346999999999999999999999999999999841 111 110 0111110000 0 00
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+. .....+...+...+.+.+.+. ++.+....|.....+ .....+.+.++.++.+|.||+|||+.
T Consensus 57 ------~g---~~~~i~~~~l~~~~~~~~~~~-~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 57 ------PG---FPNGIDGNELMMNMRTQSEKY-GTTIITETIDHVDFS--TQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp ------TT---CTTCEEHHHHHHHHHHHHHHT-TCEEECCCEEEEECS--SSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred ------cC---CcccCCHHHHHHHHHHHHhhc-CcEEEEeEEEEeecC--CCceEEEECCCeEEEEeEEEEccccc
Confidence 00 001234556777777778776 778877777766643 34455777888899999999999974
No 13
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.55 E-value=2e-14 Score=164.97 Aligned_cols=156 Identities=21% Similarity=0.237 Sum_probs=91.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCcc---------------chhhHHHHhhcCc
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAK---------------SQLVHEVDALGGE 140 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~---------------~~l~~el~~lg~~ 140 (699)
.++||||||||++|++||+.|++.|++|+|||+.....+. ...+-|++.. ..+..+....+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~--s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGN--AKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQN 202 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT--GGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc--hhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3689999999999999999999999999999996221111 0011122110 0011111000100
Q ss_pred c------chhhchhhhhHHhhcc----------CCCccc---ccc-ccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEE
Q 048823 141 I------GKVADMCYLQKRVLNT----------SRGPAV---WAL-RAQTDKREYAMRMKNIVESTANLCIR-EAMVTDI 199 (699)
Q Consensus 141 ~------~~~~d~~~i~~~~~~~----------s~g~~~---~~~-r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l 199 (699)
. ..+.+.......++.. ..+... +.+ ........+...|.+.+++. |++++ +++|++|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~-gv~i~~~~~v~~l 281 (571)
T 1y0p_A 203 INDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKR-NIDLRMNTRGIEV 281 (571)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEEEEEE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCCEeeEe
Confidence 0 0001111111111111 001000 000 01134567888999999886 89987 6999999
Q ss_pred EecCCCCEEEEEEc--Ccc--EEecCeEEEecCCCCCCc
Q 048823 200 LLGKNDNVEGVCTF--FGM--NFYAPSVVLTTGTFMSGK 234 (699)
Q Consensus 200 ~~e~~g~v~gV~t~--dG~--~i~Ad~VVlAtG~~~~~~ 234 (699)
..+++++++||++. +|+ +|.||.||+|||+|+...
T Consensus 282 ~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~ 320 (571)
T 1y0p_A 282 LKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNN 320 (571)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCH
T ss_pred EEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCH
Confidence 88633889998876 575 689999999999997643
No 14
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.53 E-value=3.9e-14 Score=160.27 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc---EEecC-eEEEecCCCCCC
Q 048823 174 EYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM---NFYAP-SVVLTTGTFMSG 233 (699)
Q Consensus 174 ~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~---~i~Ad-~VVlAtG~~~~~ 233 (699)
.+...|.+.+++. |++++ ++.|++|+.+++++++||.+.++. +|.|+ .||+|||+|+.+
T Consensus 203 ~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n 266 (510)
T 4at0_A 203 MLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYN 266 (510)
T ss_dssp HHHHHHHHHHHHT-TCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHc-CCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhC
Confidence 7888899988887 89997 699999998646899999876432 68995 999999999754
No 15
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.53 E-value=1.2e-13 Score=159.33 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEEEecCCCCCCceeecccccCCC
Q 048823 172 KREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVVLTTGTFMSGKIWVGRTSMPAG 245 (699)
Q Consensus 172 ~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VVlAtG~~~~~~~~~g~~~~~~g 245 (699)
...+...|.+.+.+. |++++ ++.|++|..+ ++++.||.+. +|+ .|.|+.||+|||+++.. +. ..+.+.+
T Consensus 154 G~~l~~~L~~~~~~~-gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~--y~-~~t~~~~ 228 (621)
T 2h88_A 154 GHSLLHTLYGRSLRY-DTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT--YF-SCTSAHT 228 (621)
T ss_dssp HHHHHHHHHHHHTTS-CCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG--SS-SBSSCTT
T ss_pred HHHHHHHHHHHHHhC-CCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc--cC-CcCCCCC
Confidence 457888888888775 89987 5999999886 6889998863 565 68999999999999643 21 2334445
Q ss_pred Ccccc
Q 048823 246 RAGES 250 (699)
Q Consensus 246 r~g~~ 250 (699)
..|+.
T Consensus 229 ~tGdG 233 (621)
T 2h88_A 229 STGDG 233 (621)
T ss_dssp CCCHH
T ss_pred CChHH
Confidence 55554
No 16
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.53 E-value=2.7e-14 Score=163.69 Aligned_cols=154 Identities=21% Similarity=0.245 Sum_probs=91.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCcc---------------chhhHHHHhhcCc
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAK---------------SQLVHEVDALGGE 140 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~---------------~~l~~el~~lg~~ 140 (699)
.++||||||||++|++||+.|++.|++|+|||+.... +. ....+-|++.. ..+..++...+..
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~-gg-~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS-GG-NSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS-CT-TGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC-CC-cccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999999996211 11 00011122210 0111111111110
Q ss_pred c------chhhchhhhhHHhhccC----------CCc---cccccc-cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEE
Q 048823 141 I------GKVADMCYLQKRVLNTS----------RGP---AVWALR-AQTDKREYAMRMKNIVESTANLCIR-EAMVTDI 199 (699)
Q Consensus 141 ~------~~~~d~~~i~~~~~~~s----------~g~---~~~~~r-~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l 199 (699)
. ..+.+.......++... .+. ..+.+. ...+...+...|.+.+++. |++++ +++|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~~v~~l 276 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQ-GIDTRLNSRVVKL 276 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHT-TCCEECSEEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCCEEEEE
Confidence 0 00011111111111110 010 000000 1134677889999999886 88887 6999999
Q ss_pred EecCC-CCEEEEEEc--Ccc--EEecCeEEEecCCCCCC
Q 048823 200 LLGKN-DNVEGVCTF--FGM--NFYAPSVVLTTGTFMSG 233 (699)
Q Consensus 200 ~~e~~-g~v~gV~t~--dG~--~i~Ad~VVlAtG~~~~~ 233 (699)
..+ + ++++||++. +|+ ++.||.||+|||+|+..
T Consensus 277 ~~~-~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 277 VVN-DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp EEC-TTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred EEC-CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 887 5 889998876 675 68999999999999765
No 17
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.52 E-value=1.6e-14 Score=164.41 Aligned_cols=60 Identities=20% Similarity=0.231 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCC------CEEEEEEc---Ccc--EEecCeEEEecCCCCC
Q 048823 173 REYAMRMKNIVESTANLCIR-EAMVTDILLGKND------NVEGVCTF---FGM--NFYAPSVVLTTGTFMS 232 (699)
Q Consensus 173 ~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g------~v~gV~t~---dG~--~i~Ad~VVlAtG~~~~ 232 (699)
..+...|.+.+.+.+|++++ ++.|++|..++++ +++||.+. +|+ .|.|+.||+|||+++.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~ 209 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASK 209 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccc
Confidence 45666777888775699998 6999999973245 88998875 565 7899999999999864
No 18
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.51 E-value=2.2e-13 Score=158.16 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE---cCcc--EEecCeEEEecCCCCCCceeecccccCCC
Q 048823 172 KREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT---FFGM--NFYAPSVVLTTGTFMSGKIWVGRTSMPAG 245 (699)
Q Consensus 172 ~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t---~dG~--~i~Ad~VVlAtG~~~~~~~~~g~~~~~~g 245 (699)
...+...|.+.+.+. |++++ ++.|++|..+ ++++.||.+ .+|+ .|.|+.||+|||+++.. + ...+.+.+
T Consensus 157 G~~l~~~L~~~a~~~-gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~--y-~~tt~~~~ 231 (660)
T 2bs2_A 157 GHTMLFAVANECLKL-GVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI--Y-KNTTNAVV 231 (660)
T ss_dssp HHHHHHHHHHHHHHH-TCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG--S-SSBSSCTT
T ss_pred HHHHHHHHHHHHHhC-CCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh--c-CCCCCCCC
Confidence 457888888888876 89998 6999999876 688999876 4565 58999999999999643 2 22344455
Q ss_pred Ccccc
Q 048823 246 RAGES 250 (699)
Q Consensus 246 r~g~~ 250 (699)
..|+.
T Consensus 232 ~tGdG 236 (660)
T 2bs2_A 232 CEGTG 236 (660)
T ss_dssp CSCHH
T ss_pred cccHH
Confidence 55554
No 19
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.51 E-value=8.6e-14 Score=150.34 Aligned_cols=148 Identities=20% Similarity=0.247 Sum_probs=89.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
+.|||+|||||+||+++|+.|++.|++|+|+|++........| |+.......++++..... . .....-...++.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~----g~~l~~~~l~~l~~~~~~-~-~~~~~~~~~~~~ 76 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRC----GEGLSKGILNEADIKADR-S-FIANEVKGARIY 76 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCS----CCEEETHHHHHTTCCCCT-T-TEEEEESEEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCce----ecccCHHHHHHcCCCchh-h-hhhcccceEEEE
Confidence 4599999999999999999999999999999985221111122 222122233332211100 0 000000000000
Q ss_pred ccCCC--------ccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc-Cc--cEEecCeE
Q 048823 156 NTSRG--------PAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF-FG--MNFYAPSV 223 (699)
Q Consensus 156 ~~s~g--------~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~-dG--~~i~Ad~V 223 (699)
..+.. .........+++..+...|.+.+.+. |++++ .+.|+++..+ ++++.+|... +| .+++||.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~-G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~v 154 (397)
T 3oz2_A 77 GPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMV 154 (397)
T ss_dssp CTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEE
T ss_pred eCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhc-CcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEE
Confidence 00000 00011112468999999999999886 78887 6999999876 6778777643 33 36899999
Q ss_pred EEecCCCC
Q 048823 224 VLTTGTFM 231 (699)
Q Consensus 224 VlAtG~~~ 231 (699)
|.|+|..+
T Consensus 155 IgAdG~~S 162 (397)
T 3oz2_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EeCCcccc
Confidence 99999874
No 20
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.49 E-value=1.9e-13 Score=143.91 Aligned_cols=45 Identities=22% Similarity=0.316 Sum_probs=37.9
Q ss_pred ccCcccccCCCCCEEEecccCCC--chHHHHHHHHHHHHHHHHHHhcC
Q 048823 397 QCYRSLMTKKVEGLFFSGQINGT--TGYEEAAAQGIISGINAARHSDG 442 (699)
Q Consensus 397 ~l~~~letk~i~gLf~AGqi~G~--~Gy~eA~a~G~~Ag~naa~~~~~ 442 (699)
..+++|+|. +||+|+|||+++. .-...|+.||.+||.|+++++.+
T Consensus 261 ~vd~~~~Ts-~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 261 VTKDDMTTS-VPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp CCCTTSBCS-STTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCccC-CCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 467889985 9999999999863 34578999999999999998754
No 21
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.48 E-value=8.2e-14 Score=161.77 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHcc-CCeEEE-eeEEEEEEecCC--CCEEEEEE---cCcc--EEecCeEEEecCCCCC
Q 048823 172 KREYAMRMKNIVEST-ANLCIR-EAMVTDILLGKN--DNVEGVCT---FFGM--NFYAPSVVLTTGTFMS 232 (699)
Q Consensus 172 ~~~~~~~L~~~l~~~-~gv~i~-~~~V~~l~~e~~--g~v~gV~t---~dG~--~i~Ad~VVlAtG~~~~ 232 (699)
...+...|.+.+.+. +|++++ ++.|++|..+++ +++.||.. .+|+ .|.|+.||+|||++.+
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 345777777777775 488888 589999988733 38999875 3454 6899999999999864
No 22
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.47 E-value=2.6e-12 Score=133.32 Aligned_cols=109 Identities=25% Similarity=0.184 Sum_probs=81.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
+||+|||||++|+++|+.|++.|++|+|+|++.. .+. ....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~----------~~~---------------~~~~-------------- 43 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGER----------RNR---------------FASH-------------- 43 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC----------GGG---------------GCSC--------------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc----------ccc---------------cchh--------------
Confidence 8999999999999999999999999999998410 000 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ +......+...+...+.+.+.+.+++.+++++|+++..+ +..+.|.+.+|.++.+|.||+|||..
T Consensus 44 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~--~~~~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 44 SHG---FLGQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGS--FGEFIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp CCS---STTCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEE--TTEEEEEETTSCEEEEEEEEECCCCE
T ss_pred hcC---CcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEc--CCeEEEEECCCCEEEcCEEEECCCCC
Confidence 000 000013466678888888888887899988899999875 33467888899889999999999985
No 23
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.45 E-value=3.3e-12 Score=136.76 Aligned_cols=60 Identities=8% Similarity=-0.039 Sum_probs=51.2
Q ss_pred ccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc--cEEecCeEEEecCCC
Q 048823 169 QTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 169 ~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG--~~i~Ad~VVlAtG~~ 230 (699)
.+++..+...|.+.+++. |++++ +++|++|..+ ++.++.|.+.+| .++.||.||+|+|.|
T Consensus 146 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVR-PEGGFELDFGGAEPMTLSCRVLINAAGLH 208 (369)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEC-TTSSEEEEECTTSCEEEEEEEEEECCGGG
T ss_pred EECHHHHHHHHHHHHHHC-CCEEECCCEEEEEEEc-CCceEEEEECCCceeEEEeCEEEECCCcc
Confidence 468889999999999887 88988 7999999876 455566888888 489999999999998
No 24
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.44 E-value=2.3e-13 Score=156.49 Aligned_cols=75 Identities=19% Similarity=0.137 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE---cCcc--EEecCeEEEecCCCCCCceeecccccCCC
Q 048823 172 KREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT---FFGM--NFYAPSVVLTTGTFMSGKIWVGRTSMPAG 245 (699)
Q Consensus 172 ~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t---~dG~--~i~Ad~VVlAtG~~~~~~~~~g~~~~~~g 245 (699)
...+...|.+.+.+. |++++ ++.|++|..+++++++||.+ .+|+ .|.|+.||+|||+|+.. + .....+.+
T Consensus 142 g~~l~~~L~~~~~~~-gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~--y-~~~~~~~~ 217 (588)
T 2wdq_A 142 GHALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI--Y-QSTTNAHI 217 (588)
T ss_dssp HHHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG--S-SSBSSCTT
T ss_pred HHHHHHHHHHHHHhC-CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc--c-CCcCCCCC
Confidence 457888888888886 89987 59999998753578999886 4565 68999999999998642 2 12334445
Q ss_pred Ccccc
Q 048823 246 RAGES 250 (699)
Q Consensus 246 r~g~~ 250 (699)
..|+.
T Consensus 218 ~tGdG 222 (588)
T 2wdq_A 218 NTGDG 222 (588)
T ss_dssp CCCHH
T ss_pred chHHH
Confidence 55554
No 25
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.41 E-value=3.1e-12 Score=134.37 Aligned_cols=110 Identities=28% Similarity=0.273 Sum_probs=79.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
.+||+|||||++|+++|+.|++.|++|+|+|++ .||.... ......+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~------------~gg~~~~---------~~~~~~~------------ 61 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET------------PGGQLTE---------AGIVDDY------------ 61 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS------------TTGGGGG---------CCEECCS------------
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc------------CCCeecc---------ccccccc------------
Confidence 589999999999999999999999999999983 2221100 0000000
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+.. .......+...+.+.+.+. +++++.++|+++..+ +..+.|.+.+|.++.+|.||+|||..
T Consensus 62 ----~~~----~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~--~~~~~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 62 ----LGL----IEIQASDMIKVFNKHIEKY-EVPVLLDIVEKIENR--GDEFVVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp ----TTS----TTEEHHHHHHHHHHHHHTT-TCCEEESCEEEEEEC----CEEEEESSSCEEEEEEEEECCCCE
T ss_pred ----CCC----CCCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEec--CCEEEEEECCCCEEEcCEEEECcCCC
Confidence 000 0134567788888888886 788877999999865 34466888888899999999999986
No 26
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.41 E-value=8.1e-12 Score=120.73 Aligned_cols=108 Identities=28% Similarity=0.245 Sum_probs=77.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
|||+|||||++|+++|..|++.|.+|+|+|+.... +.... .+..+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~---~~~~~-------------------~~~~~------------- 46 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSK---VKGVS-------------------RVPNY------------- 46 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCT---TTTCS-------------------CCCCS-------------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCc---ccCch-------------------hhhcc-------------
Confidence 79999999999999999999999999999984210 00000 00000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+.. ........+...+.+.+++. +++++..+|+++..+ ++. +.|.+.+| ++.+|.||+|+|..
T Consensus 47 ---~~~---~~~~~~~~~~~~l~~~~~~~-gv~v~~~~v~~i~~~-~~~-~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 47 ---PGL---LDEPSGEELLRRLEAHARRY-GAEVRPGVVKGVRDM-GGV-FEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp ---TTC---TTCCCHHHHHHHHHHHHHHT-TCEEEECCCCEEEEC-SSS-EEEECSSC-EEEEEEEEECCTTC
T ss_pred ---CCC---cCCCCHHHHHHHHHHHHHHc-CCEEEeCEEEEEEEc-CCE-EEEEECCC-EEEECEEEECCCCC
Confidence 000 00234567888888888886 888874499999865 333 56788888 89999999999986
No 27
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.40 E-value=1.9e-12 Score=145.49 Aligned_cols=57 Identities=14% Similarity=0.121 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 173 REYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 173 ~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
..+.+.|.+.+++. |++|. +++|++|..+ ++++++|++.||+++.||.||.+++.+.
T Consensus 221 ~~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDL-GGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHh-CCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 35678888888887 77776 8999999987 7999999999999999999999999764
No 28
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.38 E-value=3.9e-12 Score=133.53 Aligned_cols=112 Identities=23% Similarity=0.291 Sum_probs=79.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
|||+|||||++|+++|+.|++.|. +|+|+|++ ..||.... ...+..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-----------~~gg~~~~---------~~~~~~~------------ 49 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-----------MPGGQITG---------SSEIENY------------ 49 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-----------STTCGGGG---------CSCBCCS------------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-----------CCCccccc---------ccccccC------------
Confidence 799999999999999999999999 99999983 11221100 0000000
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
+.. ....++..+...+.+.+.+. +++++.++|+++..+ + +.+.|.+.+|.++.+|.||+|||...
T Consensus 50 ----~~~---~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~~-~-~~~~v~~~~g~~~~~~~vv~AtG~~~ 114 (311)
T 2q0l_A 50 ----PGV---KEVVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKK-D-SHFVILAEDGKTFEAKSVIIATGGSP 114 (311)
T ss_dssp ----TTC---CSCBCHHHHHHHHHHHHHTT-SCEEECSCEEEEEEE-T-TEEEEEETTSCEEEEEEEEECCCEEE
T ss_pred ----CCC---cccCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEEc-C-CEEEEEEcCCCEEECCEEEECCCCCC
Confidence 000 01346677888888888876 888877889998865 3 34557778888899999999999753
No 29
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.34 E-value=3.8e-12 Score=134.69 Aligned_cols=119 Identities=22% Similarity=0.210 Sum_probs=80.4
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
+..+||+|||||++|+++|+.|++.|++|+|+|+.. .++...||..... .....+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~------~~~~~~gg~~~~~---------~~~~~~---------- 74 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMM------ANGIAAGGQLTTT---------TEIENF---------- 74 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS------BTTBCTTCGGGGS---------SEECCS----------
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC------CCCCCcCcccccc---------hhhccc----------
Confidence 356999999999999999999999999999999842 1223334322100 000000
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEE---cCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCT---FFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t---~dG~~i~Ad~VVlAtG~~ 230 (699)
+. .........+...+.+.+.+. +++++...|+++..+ ++.+.+.+ .++..+.+|.||+|||..
T Consensus 75 ------~~---~~~~~~~~~~~~~~~~~~~~~-gv~i~~~~v~~i~~~--~~~~~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 75 ------PG---FPDGLTGSELMDRMREQSTKF-GTEIITETVSKVDLS--SKPFKLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp ------TT---CTTCEEHHHHHHHHHHHHHHT-TCEEECSCEEEEECS--SSSEEEEETTCSSSCCEEEEEEEECCCEE
T ss_pred ------CC---CcccCCHHHHHHHHHHHHHHc-CCEEEEeEEEEEEEc--CCEEEEEEEecCCCcEEEeCEEEECcCCC
Confidence 00 000234567888888888887 899886449998765 33445665 366789999999999985
No 30
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.34 E-value=1.4e-11 Score=129.89 Aligned_cols=113 Identities=24% Similarity=0.231 Sum_probs=77.1
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHH
Q 048823 74 IDERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKR 153 (699)
Q Consensus 74 ~~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~ 153 (699)
|..++||+|||||++|+++|+.|++.|++|+|+|+. . .||.... ...+..+
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~---------~gg~~~~---------~~~~~~~--------- 63 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA--V---------AGGLTAE---------APLVENY--------- 63 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--S---------TTGGGGG---------CSCBCCB---------
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC--C---------CCccccc---------cchhhhc---------
Confidence 345699999999999999999999999999999983 1 1211100 0000000
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+.. ...+...+...+.+.+.+. +++++.++|+++..+ ++ .+.|.+ ++.++.+|.||+|||..
T Consensus 64 -------~~~----~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~-~~-~~~v~~-~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 64 -------LGF----KSIVGSELAKLFADHAANY-AKIREGVEVRSIKKT-QG-GFDIET-NDDTYHAKYVIITTGTT 125 (319)
T ss_dssp -------TTB----SSBCHHHHHHHHHHHHHTT-SEEEETCCEEEEEEE-TT-EEEEEE-SSSEEEEEEEEECCCEE
T ss_pred -------CCC----cccCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEEe-CC-EEEEEE-CCCEEEeCEEEECCCCC
Confidence 000 0234556777778878776 888877889988765 33 344666 56689999999999975
No 31
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.34 E-value=1.6e-11 Score=129.41 Aligned_cols=115 Identities=20% Similarity=0.270 Sum_probs=81.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
.+||+|||||++|+++|+.|++.|++|+|+|+. +..||... . ...... ..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~----------~~~gG~~~----~---~~~~~~--~~~---------- 57 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESL----------PQLGGQLS----A---LYPEKY--IYD---------- 57 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS----------SSSCHHHH----H---HCTTSE--ECC----------
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcC----------CCCCceeh----h---cCCCce--Eec----------
Confidence 489999999999999999999999999999984 23332210 0 000000 000
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+.. ....+..+...+.+.+.+. +++++ +++|+++..+ ++..+.|.+.+|+ +.+|.||+|||..
T Consensus 58 ---~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~-~~~~~~v~~~~g~-~~~d~vVlAtG~~ 122 (332)
T 3lzw_A 58 ---VAGF----PKIRAQELINNLKEQMAKF-DQTICLEQAVESVEKQ-ADGVFKLVTNEET-HYSKTVIITAGNG 122 (332)
T ss_dssp ---STTC----SSEEHHHHHHHHHHHHTTS-CCEEECSCCEEEEEEC-TTSCEEEEESSEE-EEEEEEEECCTTS
T ss_pred ---cCCC----CCCCHHHHHHHHHHHHHHh-CCcEEccCEEEEEEEC-CCCcEEEEECCCE-EEeCEEEECCCCC
Confidence 0000 0234567888888888876 78887 6999999876 3436778888885 9999999999983
No 32
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.33 E-value=2.6e-11 Score=128.89 Aligned_cols=130 Identities=18% Similarity=0.149 Sum_probs=81.8
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
++||+|||||++|+++|+.|++.|++|+|+|+. +..||.+... +..... .... ....+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~----------~~~gg~~~~~-------~~~~~~--~~~~--~~~~~~ 61 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAE----------ASPGGAWQHA-------WHSLHL--FSPA--GWSSIP 61 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCS----------SSSSGGGGGS-------CTTCBC--SSCG--GGSCCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECC----------CCCCCcccCC-------CCCcEe--cCch--hhhhCC
Confidence 589999999999999999999999999999985 2222221100 000000 0000 000000
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~ 232 (699)
....+ ........+..+...+.+.+++. +++++ +++|+++..+ ++.+.+|.+.+| ++.+|.||+|||.++.
T Consensus 62 ~~~~~--~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~-~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 62 GWPMP--ASQGPYPARAEVLAYLAQYEQKY-ALPVLRPIRVQRVSHF-GERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp SSCCC--CCSSSSCBHHHHHHHHHHHHHHT-TCCEECSCCEEEEEEE-TTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CCCCC--CCccCCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEC-CCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 00000 00011234567888888888886 78876 6899999876 443333888888 8999999999997643
No 33
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.33 E-value=1.1e-11 Score=131.05 Aligned_cols=115 Identities=24% Similarity=0.312 Sum_probs=79.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
..+||+|||||++|+++|+.|++.|++|+|+|+. . .||.... ..... .
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~---------~gg~~~~---------~~~~~---~--------- 54 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG--M---------PGGQIAW---------SEEVE---N--------- 54 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--C---------TTGGGGG---------CSCBC---C---------
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC--C---------CCccccc---------ccccc---c---------
Confidence 4689999999999999999999999999999984 1 1221100 00000 0
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecC-CCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGK-NDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~-~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+.. ....++..+...+.+.+.+. +++++.++|+++..+. ++..+.|.+.+|.++.+|.||+|||..
T Consensus 55 ----~~~~---~~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 55 ----FPGF---PEPIAGMELAQRMHQQAEKF-GAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp ----STTC---SSCBCHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEE
T ss_pred ----CCCC---CCCCCHHHHHHHHHHHHHHc-CCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 0000 00235567777888888876 8888778899887641 122245677788899999999999985
No 34
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.29 E-value=3.7e-11 Score=125.97 Aligned_cols=112 Identities=24% Similarity=0.339 Sum_probs=78.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
+|||+|||||++|+++|+.|++.|++|+|+|+. .||.... ..+ . ..+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~------------~gG~~~~-------~~~-~-~~~~----------- 48 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGER------------FGGQILD-------TVD-I-ENYI----------- 48 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSS------------TTGGGGG-------CCE-E-CCBT-----------
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC------------CCceecc-------ccc-c-cccc-----------
Confidence 389999999999999999999999999999862 1221100 000 0 0000
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEEe-eEEEEEEecCC-CCEEEEEEcCccEEecCeEEEecCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIRE-AMVTDILLGKN-DNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~-~~V~~l~~e~~-g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+ ....+...+...+.+.+.+. +++++. ++|+.+..+.+ +..+.|.+.+|.++.+|.||+|||+.
T Consensus 49 ---~------~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 49 ---S------VPKTEGQKLAGALKVHVDEY-DVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp ---T------BSSEEHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred ---C------cCCCCHHHHHHHHHHHHHHc-CCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 0 00124456777788888776 899885 69999975311 33567888888889999999999975
No 35
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.29 E-value=1.3e-11 Score=136.22 Aligned_cols=63 Identities=16% Similarity=0.188 Sum_probs=54.9
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-ee---EEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EA---MVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~---~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~ 232 (699)
..+++..+...|.+.+++. |++++ ++ +|++|..+ ++++.||++.+|.++.||.||+|+|+|+.
T Consensus 156 g~~~~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3567889999999999987 88887 57 99999876 67888999999988999999999999953
No 36
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.26 E-value=2.8e-11 Score=128.23 Aligned_cols=118 Identities=21% Similarity=0.204 Sum_probs=78.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
..+||+|||||++|+++|+.|++.|++|+|+|+. ..+....||.... ..... .
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~------~~~~~~~gg~~~~---------~~~~~---~--------- 59 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGW------MANDIAPGGQLTT---------TTDVE---N--------- 59 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCS------SBTTBCTTCGGGG---------CSEEC---C---------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEecc------CccccCCCceeee---------ccccc---c---------
Confidence 3589999999999999999999999999999972 1111222221100 00000 0
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.+.. ....++..+...+.+.+.+. +++++...|+++..+ ++ .+.|.+ +|.++.+|.||+|||.+.
T Consensus 60 ----~~~~---~~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~-~~-~~~v~~-~~~~~~~~~vv~A~G~~~ 124 (333)
T 1vdc_A 60 ----FPGF---PEGILGVELTDKFRKQSERF-GTTIFTETVTKVDFS-SK-PFKLFT-DSKAILADAVILAIGAVA 124 (333)
T ss_dssp ----STTC---TTCEEHHHHHHHHHHHHHHT-TCEEECCCCCEEECS-SS-SEEEEC-SSEEEEEEEEEECCCEEE
T ss_pred ----CCCC---ccCCCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEEc-CC-EEEEEE-CCcEEEcCEEEECCCCCc
Confidence 0000 00234557777888878776 888886558888764 33 345666 777899999999999863
No 37
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.25 E-value=1.1e-11 Score=134.49 Aligned_cols=146 Identities=16% Similarity=0.163 Sum_probs=91.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccc-hhh--chhhhhHH
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIG-KVA--DMCYLQKR 153 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~-~~~--d~~~i~~~ 153 (699)
+|||+|||||++|+++|+.|++.|++|+|+|++........| ++.... +.++.+|-... ... ...+..+.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~----~~~~~~---~~~~~lg~~~~~~~~~~~~~~~~~~ 76 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRC----GEGLSK---GILNEADIKADRSFIANEVKGARIY 76 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCS----CCEEET---HHHHHTTCCCCTTTEEEEESEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCccc----ccccCH---HHHHHcCCCCChHHhhhhcceEEEE
Confidence 589999999999999999999999999999996311111122 111111 22333332110 000 00000000
Q ss_pred hhc------cCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---CccEEecCeE
Q 048823 154 VLN------TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGMNFYAPSV 223 (699)
Q Consensus 154 ~~~------~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~~i~Ad~V 223 (699)
... .............+++..+...|.+.+.+. |++++ +++|+++..+ ++++.+|.+. ++.++.||.|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~v 154 (397)
T 3cgv_A 77 GPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMV 154 (397)
T ss_dssp CTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhC-CCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEE
Confidence 000 000000011123568899999999999886 89987 6999999876 6778878873 5568999999
Q ss_pred EEecCCCC
Q 048823 224 VLTTGTFM 231 (699)
Q Consensus 224 VlAtG~~~ 231 (699)
|+|+|.++
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999883
No 38
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.24 E-value=9.3e-11 Score=122.65 Aligned_cols=113 Identities=25% Similarity=0.282 Sum_probs=75.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeE-EeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLL-LTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~L-lE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
.++||+|||||++|+++|+.|++.|++|+| +|+. . .||..... ..+..+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~--~---------~gG~~~~~---------~~~~~~---------- 52 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG--M---------PGGQITSS---------SEIENY---------- 52 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS--S---------TTGGGGGC---------SCBCCS----------
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC--C---------CCceeeee---------ceeccC----------
Confidence 358999999999999999999999999999 9982 1 12211000 000000
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEE-EEcCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGV-CTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV-~t~dG~~i~Ad~VVlAtG~~ 230 (699)
|. .........+...+.+.+.+. +++++..+|+++ .+++.+.+.| ...++ ++.+|.||+|||..
T Consensus 53 ------~~---~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 53 ------PG---VAQVMDGISFMAPWSEQCMRF-GLKHEMVGVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp ------TT---CCSCBCHHHHHHHHHHHHTTT-CCEEECCCEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEE
T ss_pred ------CC---CCCCCCHHHHHHHHHHHHHHc-CcEEEEEEEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCC
Confidence 00 001235667888888888876 888886689988 5521133443 22344 89999999999973
No 39
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.23 E-value=7.2e-12 Score=140.89 Aligned_cols=34 Identities=32% Similarity=0.595 Sum_probs=31.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|++||+.|++.|++|+|||+.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 57 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKR 57 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 4599999999999999999999999999999984
No 40
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.21 E-value=6.5e-12 Score=140.35 Aligned_cols=124 Identities=17% Similarity=0.141 Sum_probs=72.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCcc--chhhHH-HHhhcCccchhhchhhhhH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAK--SQLVHE-VDALGGEIGKVADMCYLQK 152 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~--~~l~~e-l~~lg~~~~~~~d~~~i~~ 152 (699)
.+|||+|||||++|++||+.|++.|++|+|||+. ...||... +..... +........ ..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~----------~~~GG~~~~~gciPsk~l~~~a~~~~--------~~ 64 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPK----------GELGGNCLYSGCVPSKTVREVIQTAW--------RL 64 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTT----------SSSSHHHHHHSHHHHHHHHHHHHHHH--------HH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECC----------CCCCCcccccCCCchHHHHHHHHHHH--------HH
Confidence 3599999999999999999999999999999963 23333211 000000 000000000 00
Q ss_pred HhhccCCCccccccccccCHHH-------HH-----HHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccE--E
Q 048823 153 RVLNTSRGPAVWALRAQTDKRE-------YA-----MRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMN--F 218 (699)
Q Consensus 153 ~~~~~s~g~~~~~~r~~~d~~~-------~~-----~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~--i 218 (699)
+..... .. ..+... +. ..+...+.+ .+++++..+|+.+. ...+.|.+.+|.+ +
T Consensus 65 ~~~~~~-~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~v~~~~g~v~~id----~~~~~V~~~~g~~~~~ 131 (466)
T 3l8k_A 65 TNIANV-KI-------PLDFSTVQDRKDYVQELRFKQHKRNMSQY-ETLTFYKGYVKIKD----PTHVIVKTDEGKEIEA 131 (466)
T ss_dssp HHHHCS-CC-------CCCHHHHHHHHHHHHHHHHHHHHHHHTTC-TTEEEESEEEEEEE----TTEEEEEETTSCEEEE
T ss_pred HhcccC-CC-------CcCHHHHHHHHHhheeccccchHHHHHHh-CCCEEEEeEEEEec----CCeEEEEcCCCcEEEE
Confidence 000000 00 111111 11 333344444 48999877887774 2345677888887 9
Q ss_pred ecCeEEEecCCC
Q 048823 219 YAPSVVLTTGTF 230 (699)
Q Consensus 219 ~Ad~VVlAtG~~ 230 (699)
.+|.||+|||+.
T Consensus 132 ~~d~lviAtG~~ 143 (466)
T 3l8k_A 132 ETRYMIIASGAE 143 (466)
T ss_dssp EEEEEEECCCEE
T ss_pred ecCEEEECCCCC
Confidence 999999999974
No 41
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.21 E-value=1.8e-10 Score=130.46 Aligned_cols=113 Identities=25% Similarity=0.356 Sum_probs=79.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
..+||+|||||+||+++|+.|++.|++|+|+|+.. ||.... . .+. ..+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~------------GG~~~~-------~-~~~-~~~~---------- 259 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF------------GGQVLD-------T-VDI-ENYI---------- 259 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST------------TGGGTT-------C-SCB-CCBT----------
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC------------CCcccc-------c-ccc-cccC----------
Confidence 46999999999999999999999999999998631 111100 0 000 0000
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEe-eEEEEEEecC-CCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIRE-AMVTDILLGK-NDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~-~~V~~l~~e~-~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+ . ...+...+...+.+.+.+. +++++. ++|+.+..+. ++..+.|.+.+|.++.+|.||+|||+.
T Consensus 260 ----~--~----~~~~~~~l~~~l~~~~~~~-gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 260 ----S--V----PKTEGQKLAGALKAHVSDY-DVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp ----T--B----SSBCHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred ----C--C----CCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 0 0 0134557778888888876 899885 6999997531 133567888889899999999999975
No 42
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.20 E-value=4e-11 Score=127.51 Aligned_cols=113 Identities=26% Similarity=0.262 Sum_probs=76.5
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
+..+||+|||||++|+++|+.|++.|++|+|+|+. ..||... ...... .
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-----------~~gg~~~---------~~~~~~---~-------- 60 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-----------SFGGALM---------TTTDVE---N-------- 60 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-----------SCSCGGG---------SCSCBC---C--------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-----------CCCCcee---------ccchhh---h--------
Confidence 34689999999999999999999999999999973 1122100 000000 0
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEE-EEcCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGV-CTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV-~t~dG~~i~Ad~VVlAtG~~ 230 (699)
-+.. ....+...+...+.+.+.+. +++++...|+++..+ + .+.| .+.+|.++.+|.||+|||..
T Consensus 61 -----~~~~---~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~~--~-~~~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 61 -----YPGF---RNGITGPELMDEMREQALRF-GADLRMEDVESVSLH--G-PLKSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp -----STTC---TTCBCHHHHHHHHHHHHHHT-TCEEECCCEEEEECS--S-SSEEEEETTSCEEEEEEEEECCCEE
T ss_pred -----cCCC---CCCCCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEeC--C-cEEEEEeCCCCEEEeCEEEECCCCC
Confidence 0000 00234556777777777776 888886558888652 2 2345 67788889999999999985
No 43
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.19 E-value=7.3e-11 Score=127.54 Aligned_cols=60 Identities=20% Similarity=0.170 Sum_probs=52.2
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+++..+...|.+.+++. |++++ +++|+++..+ ++++.+|.+.+| ++.||.||+|+|.|
T Consensus 144 ~~~~~~~l~~~l~~~~~~~-Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g-~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEY-GAKLLEYTEVKGFLIE-NNEIKGVKTNKG-IIKTGIVVNATNAW 204 (382)
T ss_dssp CEECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SSBEEEEEETTE-EEECSEEEECCGGG
T ss_pred eeECHHHHHHHHHHHHHHC-CCEEECCceEEEEEEE-CCEEEEEEECCc-EEECCEEEECcchh
Confidence 3468899999999999886 88887 5899999876 677888999888 79999999999998
No 44
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.19 E-value=5.6e-11 Score=125.04 Aligned_cols=112 Identities=19% Similarity=0.196 Sum_probs=75.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
..+||+|||||++|+++|+.|++.|++|+|+|+. ..||... ...... .
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-----------~~gg~~~---------~~~~~~---~--------- 51 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-----------EKGGQLT---------TTTEVE---N--------- 51 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-----------STTGGGG---------GCSBCC---C---------
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-----------CCCceEe---------cchhhh---h---------
Confidence 3589999999999999999999999999999973 1122100 000000 0
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+.. .....+..+...+.+.+.+. +++++...|+.+..+ ++ .+.| +.+|.++.+|.||+|||..
T Consensus 52 ----~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~-~~-~~~v-~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 52 ----WPGD---PNDLTGPLLMERMHEHATKF-ETEIIFDHINKVDLQ-NR-PFRL-NGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp ----STTC---CSSCBHHHHHHHHHHHHHHT-TCEEECCCEEEEECS-SS-SEEE-EESSCEEEEEEEEECCCEE
T ss_pred ----CCCC---CCCCCHHHHHHHHHHHHHHC-CCEEEEeeeeEEEec-CC-EEEE-EeCCCEEEcCEEEECCCCC
Confidence 0000 00134456677777777776 888886568888754 33 3444 6677789999999999975
No 45
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.19 E-value=7.4e-11 Score=129.23 Aligned_cols=147 Identities=20% Similarity=0.181 Sum_probs=90.9
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhc-----hhhhh
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVAD-----MCYLQ 151 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d-----~~~i~ 151 (699)
++||+|||||++|+++|+.|++.|.+|+|+|+.. .... ..|..........++.+|-. ..+.. ..+..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~--~~~~----~~g~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~~~~ 77 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK--FPRF----VIGESLLPRCMEHLDEAGFL-DAVKAQGFQQKFGAK 77 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC--SSCC----CSCCBCCGGGHHHHHHTTCH-HHHHHTTCEEECEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC--CCCC----cccCcccHhHHHHHHHcCCh-HHHHHcCCcccCCcE
Confidence 4899999999999999999999999999999951 1111 11221112222223333210 00000 00000
Q ss_pred HHhh------ccC-CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc--EEecC
Q 048823 152 KRVL------NTS-RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM--NFYAP 221 (699)
Q Consensus 152 ~~~~------~~s-~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~--~i~Ad 221 (699)
+.+. ... ...........+++..+...|.+.+.+. |++++ +++|+++..++++.++.|.+.+|+ +++||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~ 156 (421)
T 3nix_A 78 FVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEAR 156 (421)
T ss_dssp EEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEE
T ss_pred EEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcC
Confidence 0000 000 0000011123578999999999999887 88887 689999987633444567778887 79999
Q ss_pred eEEEecCCCC
Q 048823 222 SVVLTTGTFM 231 (699)
Q Consensus 222 ~VVlAtG~~~ 231 (699)
.||+|+|.++
T Consensus 157 ~vV~A~G~~s 166 (421)
T 3nix_A 157 FIIDASGYGR 166 (421)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999873
No 46
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.18 E-value=2.3e-11 Score=136.09 Aligned_cols=34 Identities=50% Similarity=0.762 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|++||+.|++.|++|+|||++
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 35 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKY 35 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3599999999999999999999999999999995
No 47
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.17 E-value=5.3e-11 Score=132.37 Aligned_cols=148 Identities=22% Similarity=0.263 Sum_probs=93.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeeccc-ccCCCCCCCCCCCccchhhHHHHhhcCccch--hhchhhhhH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDK-IAWQPCNPAVGGPAKSQLVHEVDALGGEIGK--VADMCYLQK 152 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~-~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~--~~d~~~i~~ 152 (699)
.++||+|||||++|+++|+.|++.|++|+|+|+.... .+...|. ... ..+.++.+|-.... .........
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g----~~l---~~~~l~~lg~~~~~~~~~~~~~~~~ 77 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCG----DAV---SKAHFDKLGMPYPKGEELENKINGI 77 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCC----CEE---EHHHHHHTTCCCCCGGGEEEEEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccc----ccc---cHHHHHHhcCCCCchHHHHhhhcce
Confidence 3589999999999999999999999999999996321 1222221 111 12333444321100 000000000
Q ss_pred HhhccCCCccc--cccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEE
Q 048823 153 RVLNTSRGPAV--WALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVV 224 (699)
Q Consensus 153 ~~~~~s~g~~~--~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VV 224 (699)
.+......... ......+++..+.+.|.+.+.+. |++++ +++|+++..+ ++++++|++. +|+ +++||.||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV 155 (453)
T 3atr_A 78 KLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDR-GVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVV 155 (453)
T ss_dssp EEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEE
T ss_pred EEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEE
Confidence 01111000000 01123568899999999999885 89987 6999999876 6778777765 675 79999999
Q ss_pred EecCCCCC
Q 048823 225 LTTGTFMS 232 (699)
Q Consensus 225 lAtG~~~~ 232 (699)
+|+|.++.
T Consensus 156 ~AdG~~s~ 163 (453)
T 3atr_A 156 EATGYSRS 163 (453)
T ss_dssp ECCGGGCT
T ss_pred ECcCCchh
Confidence 99999864
No 48
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.16 E-value=4e-11 Score=129.53 Aligned_cols=60 Identities=13% Similarity=0.099 Sum_probs=50.5
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
..+++..+...|.+.+.+. |++++ +++|+++..+ ++++ +|.+.+| ++.||.||+|+|.++
T Consensus 159 ~~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~-~~~~-~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKML-GAEIFEHTPVLHVERD-GEAL-FIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHT-TCEEETTCCCCEEECS-SSSE-EEEETTE-EEEEEEEEECCGGGT
T ss_pred eEEcHHHHHHHHHHHHHHC-CCEEEcCCcEEEEEEE-CCEE-EEEcCCc-eEEcCEEEECCChhH
Confidence 4568889999999999886 88888 5899999875 4555 7888888 899999999999983
No 49
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.16 E-value=1.1e-10 Score=127.36 Aligned_cols=147 Identities=16% Similarity=0.060 Sum_probs=92.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchh------------
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKV------------ 144 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~------------ 144 (699)
++||+|||||++|+++|+.|++.|++|+|+|+... .....| +........+.++.+|- ...+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~-~~~~~~----~~~l~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~ 79 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR-ERAING----ADLLKPAGIRVVEAAGL-LAEVTRRGGRVRHELE 79 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC-C---CC----CCEECHHHHHHHHHTTC-HHHHHHTTCEEECEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC-CCccCc----eeeECchHHHHHHHcCc-HHHHHHhCCCcceeEE
Confidence 58999999999999999999999999999998521 111111 11111122222333321 0000
Q ss_pred hchhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEE-EEEEcCccEEecCe
Q 048823 145 ADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVE-GVCTFFGMNFYAPS 222 (699)
Q Consensus 145 ~d~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~-gV~t~dG~~i~Ad~ 222 (699)
.+..+.....+.... .........+++..+...|.+.+.+.+|++++ +++|+++..+ ++.++ .|++.+|++++||.
T Consensus 80 ~~~~g~~~~~~~~~~-~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~~g~~~~ad~ 157 (399)
T 2x3n_A 80 VYHDGELLRYFNYSS-VDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRD-ERHAIDQVRLNDGRVLRPRV 157 (399)
T ss_dssp EEETTEEEEEEETTS-SCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEEC-TTSCEEEEEETTSCEEEEEE
T ss_pred EeCCCCEEEecchHH-hcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc-CCceEEEEEECCCCEEECCE
Confidence 000000000000000 00001113578899999999999887789987 6999999876 45554 68888998999999
Q ss_pred EEEecCCCC
Q 048823 223 VVLTTGTFM 231 (699)
Q Consensus 223 VVlAtG~~~ 231 (699)
||+|+|.++
T Consensus 158 vV~AdG~~s 166 (399)
T 2x3n_A 158 VVGADGIAS 166 (399)
T ss_dssp EEECCCTTC
T ss_pred EEECCCCCh
Confidence 999999985
No 50
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.15 E-value=1.5e-10 Score=133.03 Aligned_cols=148 Identities=20% Similarity=0.194 Sum_probs=92.8
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhch-----hh
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADM-----CY 149 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~-----~~ 149 (699)
+..+||+|||||++|+++|+.|++.|++|+|||+.. .... ..|..........++.+|-. ..+... ..
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~--~~~~----~~G~~l~p~~~~~l~~lGl~-~~l~~~~~~~~~~ 93 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA--FPRY----RVGESLLPGTMSILNRLGLQ-EKIDAQNYVKKPS 93 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC--SSCC----CCCCBCCHHHHHHHHHTTCH-HHHHHHCCEEECE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC--CCCC----ceeeeECHHHHHHHHHcCCc-HHHHhcCCcccCC
Confidence 346999999999999999999999999999999851 1111 11211112222333333311 000000 00
Q ss_pred hhHHhh-----------ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc-Cc-
Q 048823 150 LQKRVL-----------NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF-FG- 215 (699)
Q Consensus 150 i~~~~~-----------~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~-dG- 215 (699)
..+.+. .....+........+++..+...|.+.+.+. |++++ +++|+++..+ ++.+++|.+. +|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~ 171 (591)
T 3i3l_A 94 ATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLS-DPDRVVLTVRRGGE 171 (591)
T ss_dssp EEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEECC-STTCEEEEEEETTE
T ss_pred cEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEc-CCCEEEEEEecCCc
Confidence 000000 0000000111123578999999999999885 89988 5899999875 5778888887 66
Q ss_pred -cEEecCeEEEecCCCC
Q 048823 216 -MNFYAPSVVLTTGTFM 231 (699)
Q Consensus 216 -~~i~Ad~VVlAtG~~~ 231 (699)
.++.||.||+|+|.++
T Consensus 172 ~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGG 188 (591)
T ss_dssp EEEEEESEEEECCGGGC
T ss_pred eEEEEcCEEEECCCCcc
Confidence 5899999999999874
No 51
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.15 E-value=5.9e-12 Score=142.98 Aligned_cols=33 Identities=36% Similarity=0.655 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|||||||||++|+.||..+++.|.+|+|||+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~ 74 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYV 74 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 599999999999999999999999999999974
No 52
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.14 E-value=7.2e-11 Score=135.63 Aligned_cols=149 Identities=19% Similarity=0.220 Sum_probs=91.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHc------CCceeEEeeecccccCCCCCCCCCCCccchhhHHH----HhhcCccchhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARL------GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEV----DALGGEIGKVA 145 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~------G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el----~~lg~~~~~~~ 145 (699)
.+|||||||||++|+++|+.|++. |++|+|||++.. .+.. ...|+.......+++ ...+..+....
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~-~g~~---~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~ 109 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH-IGAH---TLSGACLDPRAFEELFPDWKEKGAPLNTPV 109 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS-TTTT---CCCCCEECTHHHHHHCTTHHHHTCCCCEEC
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCC-CCCc---cccccccCHHHHHHHHHHHHhcCCceeeee
Confidence 359999999999999999999999 999999999521 2211 111222221222222 11111110000
Q ss_pred chhhhhHHhhccCC------Ccc--cc-ccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC-
Q 048823 146 DMCYLQKRVLNTSR------GPA--VW-ALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF- 214 (699)
Q Consensus 146 d~~~i~~~~~~~s~------g~~--~~-~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d- 214 (699)
... .+.++.... .+. .. .....+++..+.+.|.+.+++. |++++ ++.|+++..++++++++|.+.+
T Consensus 110 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 110 TED--RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEAL-GVEVYPGYAAAEILFHEDGSVKGIATNDV 186 (584)
T ss_dssp CEE--EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEEECTTSSEEEEEECCE
T ss_pred chh--heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEcCCCCEEEEEeCCc
Confidence 000 000110000 000 00 0012467889999999999887 89998 6899999876456788898763
Q ss_pred -----c---------cEEecCeEEEecCCCC
Q 048823 215 -----G---------MNFYAPSVVLTTGTFM 231 (699)
Q Consensus 215 -----G---------~~i~Ad~VVlAtG~~~ 231 (699)
| .+++||.||+|+|.++
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 3 5899999999999984
No 53
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.14 E-value=1.3e-10 Score=126.51 Aligned_cols=60 Identities=20% Similarity=0.183 Sum_probs=52.3
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+++..+...|.+.+++. |++++ +++|+++..+ ++++++|.+.+| ++.||.||+|+|.+
T Consensus 169 ~~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~-~~~~~~v~~~~g-~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEM-GVDIIQNCEVTGFIKD-GEKVTGVKTTRG-TIHAGKVALAGAGH 229 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SSBEEEEEETTC-CEEEEEEEECCGGG
T ss_pred ccCCHHHHHHHHHHHHHHC-CCEEEcCCeEEEEEEe-CCEEEEEEeCCc-eEECCEEEECCchh
Confidence 4568889999999999886 88887 5999999876 677889999888 79999999999998
No 54
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.14 E-value=1.4e-10 Score=132.59 Aligned_cols=63 Identities=17% Similarity=0.221 Sum_probs=53.5
Q ss_pred cccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---c--cEEecCeEEEecCCC
Q 048823 166 LRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF---G--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 166 ~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G--~~i~Ad~VVlAtG~~ 230 (699)
+..++|+..+...+.+.+.+. |++++ +++|+++..+ ++++++|++.+ | .+++||.||+|+|.|
T Consensus 163 ~dg~vd~~~l~~~L~~~a~~~-G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 163 VEYRTDDARLTLEIMKEAVAR-GAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp EEEECCHHHHHHHHHHHHHHT-TCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred cCceEcHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 345788999999999999887 88887 5999999987 78889998865 3 479999999999998
No 55
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.13 E-value=2.5e-10 Score=133.44 Aligned_cols=61 Identities=13% Similarity=0.010 Sum_probs=51.8
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
..+++..+...|.+.+++. |++++ +++|++|..+ +++ ++|.+.+|.++.||.||+|+|+|+
T Consensus 412 g~v~p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQ-GLQIYYQYQLQNFSRK-DDC-WLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECCGGGG
T ss_pred eeeCHHHHHHHHHHHHHhC-CCEEEeCCeeeEEEEe-CCe-EEEEECCCCEEECCEEEECCCcch
Confidence 3568889999999999887 78886 6999999876 444 588888888899999999999984
No 56
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.12 E-value=3.1e-10 Score=132.91 Aligned_cols=61 Identities=7% Similarity=-0.006 Sum_probs=50.8
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc-EEecCeEEEecCCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM-NFYAPSVVLTTGTFM 231 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~-~i~Ad~VVlAtG~~~ 231 (699)
..+++..+...|.+.+++. |++++ +++|++|..+ +++ +.|.+.+|. ++.||.||+|+|+|+
T Consensus 407 g~v~p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQN-GMTCHYQHELQRLKRI-DSQ-WQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEC-SSS-EEEEEC-CCCCEEESEEEECCGGGT
T ss_pred eEECHHHHHHHHHHHHHhC-CCEEEeCCeEeEEEEe-CCe-EEEEeCCCcEEEECCEEEECCCcch
Confidence 3568889999999999887 78886 6999999886 444 578888887 899999999999985
No 57
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.12 E-value=5.1e-11 Score=133.73 Aligned_cols=33 Identities=30% Similarity=0.511 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.+|||+|||||++|++||+.|++.|++|+|||+
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk 57 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEE 57 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC
Confidence 469999999999999999999999999999998
No 58
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.12 E-value=7.9e-10 Score=117.79 Aligned_cols=133 Identities=20% Similarity=0.241 Sum_probs=86.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCceeEEeeecccccCCCCCCCCCCC-c-----cchhhHHHHhhcCccchhhch
Q 048823 76 ERFDVIVVGGGHAGCEAALASARL--GAKTLLLTLNIDKIAWQPCNPAVGGP-A-----KSQLVHEVDALGGEIGKVADM 147 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~~~~~g~~~c~~s~Gg~-~-----~~~l~~el~~lg~~~~~~~d~ 147 (699)
.+|||+|||||++|+++|+.|+++ |++|+|||+... .+. .|. .++. . .....+.++.+|-.+.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~-~GG-g~~--~~g~~~~~~~~~~~~~~~L~~~Gv~~~----- 148 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA-PGG-GAW--LGGQLFSAMVMRKPADVFLDEVGVPYE----- 148 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS-CCT-TTT--CCBTTCCCEEEETTTHHHHHHHTCCCE-----
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc-cCC-ccc--cCCccchhhhcchHHHHHHHHcCCccc-----
Confidence 358999999999999999999998 999999999522 111 111 1110 0 1111222333321110
Q ss_pred hhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCC----------------C--CEE
Q 048823 148 CYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKN----------------D--NVE 208 (699)
Q Consensus 148 ~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~----------------g--~v~ 208 (699)
..+.... ..+...+...|.+.+.+.++++++ ++.|+++..+++ + ++.
T Consensus 149 ----------~~G~~~~----~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~ 214 (344)
T 3jsk_A 149 ----------DEGDYVV----VKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIA 214 (344)
T ss_dssp ----------ECSSEEE----ESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEE
T ss_pred ----------ccCCeEE----EecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEe
Confidence 0011111 123557778888888887799998 489999987632 3 788
Q ss_pred EEEEc--------------CccEEecCeEEEecCCCC
Q 048823 209 GVCTF--------------FGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 209 gV~t~--------------dG~~i~Ad~VVlAtG~~~ 231 (699)
||++. +..+|+|+.||+|||..+
T Consensus 215 GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s 251 (344)
T 3jsk_A 215 GVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDG 251 (344)
T ss_dssp EEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSS
T ss_pred EEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCc
Confidence 88763 224799999999999874
No 59
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.12 E-value=5.5e-10 Score=116.42 Aligned_cols=133 Identities=17% Similarity=0.163 Sum_probs=85.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCceeEEeeecccccCCCCCCCCCCCcc-----chhhHHHHhhcCccchhhchhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARL-GAKTLLLTLNIDKIAWQPCNPAVGGPAK-----SQLVHEVDALGGEIGKVADMCY 149 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~-G~kV~LlE~~~~~~g~~~c~~s~Gg~~~-----~~l~~el~~lg~~~~~~~d~~~ 149 (699)
.++||+|||||++|+++|+.|++. |.+|+|||+... .+. .|.. .++... ....+.++.+|-
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~-~gg-~~~~-~~~~~~~~~~~~~~~~~l~~~G~---------- 104 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS-PGG-GAWL-GGQLFSAMIVRKPAHLFLDEIGV---------- 104 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS-CCT-TTTC-CSTTCCCEEEETTTHHHHHHHTC----------
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC-CCC-ceec-CCcchHHHHcCcHHHHHHHHcCC----------
Confidence 358999999999999999999997 999999999522 111 1111 111110 011112222221
Q ss_pred hhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---------Cc----
Q 048823 150 LQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---------FG---- 215 (699)
Q Consensus 150 i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---------dG---- 215 (699)
.+.. .+. +.. ..+...+...+.+.+.+..|++++ +++|+++..+ ++++.+|.+. +|
T Consensus 105 -~~~~----~~~--~~~--~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~ 174 (284)
T 1rp0_A 105 -AYDE----QDT--YVV--VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMD 174 (284)
T ss_dssp -CCEE----CSS--EEE--ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCC
T ss_pred -Cccc----CCC--EEE--ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCc
Confidence 1100 000 000 125567777888888775699997 5899999876 6778888764 32
Q ss_pred -cEEecCeEEEecCCCC
Q 048823 216 -MNFYAPSVVLTTGTFM 231 (699)
Q Consensus 216 -~~i~Ad~VVlAtG~~~ 231 (699)
.++.||.||+|+|..+
T Consensus 175 ~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 175 PNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp CEEEEEEEEEECCCSSS
T ss_pred eEEEECCEEEECCCCch
Confidence 5799999999999864
No 60
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.10 E-value=1.6e-10 Score=124.20 Aligned_cols=60 Identities=15% Similarity=0.136 Sum_probs=49.5
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
..+++..+...|.+.+.+. |++++ +++|+++..+ ++. +.|.+.+| ++.||.||+|+|+|+
T Consensus 144 g~~~~~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~~-~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEA-GCAQLFNCPVTAIRHD-DDG-VTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEC-SSS-EEEEESSC-EEEEEEEEECCGGGG
T ss_pred cEEcHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEc-CCE-EEEEECCC-eEEcCEEEEcCCccH
Confidence 3567889999999999886 88887 5899999875 344 56888888 599999999999985
No 61
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.10 E-value=2.4e-10 Score=123.02 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=51.0
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+++..+...|.+.+++. |++++ +++|++|..+ +++ ++|++.+| ++.||.||+|+|+|
T Consensus 149 ~~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g-~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRN-QGQVLCNHEALEIRRV-DGA-WEVRCDAG-SYRAAVLVNAAGAW 208 (381)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEESSCCCCEEEEE-TTE-EEEECSSE-EEEESEEEECCGGG
T ss_pred ceECHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEe-CCe-EEEEeCCC-EEEcCEEEECCChh
Confidence 3578899999999999987 88987 6999999876 444 78888888 89999999999998
No 62
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.09 E-value=2.9e-11 Score=133.92 Aligned_cols=105 Identities=16% Similarity=0.141 Sum_probs=71.9
Q ss_pred cccEEEECCChHHHHHHHHHHH---cCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHH
Q 048823 77 RFDVIVVGGGHAGCEAALASAR---LGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKR 153 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr---~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~ 153 (699)
..||+|||||++|+++|..|++ .|++|+|||++.. ..... ....+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~----------~~~~~---~~~~~------------------- 51 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY----------FQFVP---SNPWV------------------- 51 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE----------EECGG---GHHHH-------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC----------CcccC---Ccccc-------------------
Confidence 3689999999999999999999 8999999998410 00000 00000
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.....+...+...+.+.+.+. +++++.++|+.+..+ ++ .|.+.+|.++.+|.||+|||..
T Consensus 52 ------------~~g~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~id~~--~~--~V~~~~g~~i~~d~lviAtG~~ 111 (437)
T 3sx6_A 52 ------------GVGWKERDDIAFPIRHYVERK-GIHFIAQSAEQIDAE--AQ--NITLADGNTVHYDYLMIATGPK 111 (437)
T ss_dssp ------------HHTSSCHHHHEEECHHHHHTT-TCEEECSCEEEEETT--TT--EEEETTSCEEECSEEEECCCCE
T ss_pred ------------ccCccCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEcC--CC--EEEECCCCEEECCEEEECCCCC
Confidence 000122333333345556554 899998899999754 33 4778888889999999999985
No 63
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.09 E-value=1.8e-10 Score=126.02 Aligned_cols=149 Identities=15% Similarity=0.055 Sum_probs=87.3
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchh-h-hhH
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMC-Y-LQK 152 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~-~-i~~ 152 (699)
.+.+||+|||||++|+++|+.|++.|++|+|+|+... ....+| +........+.++.+|-. ..+.... . ...
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~-~~~~~~----~~~l~~~~~~~l~~lg~~-~~~~~~~~~~~~~ 94 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE-IKPVGA----AISVWPNGVKCMAHLGMG-DIMETFGGPLRRM 94 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC-C----C----EEEECHHHHHHHHHTTCH-HHHHHHSCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC-CCCcCe----eEEECHHHHHHHHHCCCH-HHHHhhcCCCcce
Confidence 4569999999999999999999999999999999521 111011 111111222333333310 0000000 0 000
Q ss_pred HhhccCCCcc------------ccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEe
Q 048823 153 RVLNTSRGPA------------VWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFY 219 (699)
Q Consensus 153 ~~~~~s~g~~------------~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~ 219 (699)
.+.....+.. .......+++..+...|.+.+.+ ++++ +++|+++..+ ++ .+.|++.+|+++.
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~-~~-~v~v~~~~g~~~~ 169 (407)
T 3rp8_A 95 AYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEED-AD-GVTVWFTDGSSAS 169 (407)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEE-TT-EEEEEETTSCEEE
T ss_pred EEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEec-CC-cEEEEEcCCCEEe
Confidence 0000000000 00112246788899999988865 4554 7999999876 34 3558889999999
Q ss_pred cCeEEEecCCCCCCc
Q 048823 220 APSVVLTTGTFMSGK 234 (699)
Q Consensus 220 Ad~VVlAtG~~~~~~ 234 (699)
||.||.|+|.++..+
T Consensus 170 a~~vV~AdG~~S~vr 184 (407)
T 3rp8_A 170 GDLLIAADGSHSALR 184 (407)
T ss_dssp ESEEEECCCTTCSSH
T ss_pred eCEEEECCCcChHHH
Confidence 999999999986443
No 64
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.09 E-value=2.8e-10 Score=128.61 Aligned_cols=149 Identities=23% Similarity=0.229 Sum_probs=90.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhH-HHHhhcCccchhhc-----hhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVH-EVDALGGEIGKVAD-----MCY 149 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~-el~~lg~~~~~~~d-----~~~ 149 (699)
.++||+|||||++|+++|+.|++.|++|+|||+.. ... ...|......... -++.+|- ...+.. ...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~--~~~----~~~g~~~~~~~~~~~l~~lgl-~~~~~~~~~~~~~~ 78 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA--FPR----HQIGESLLPATVHGICAMLGL-TDEMKRAGFPIKRG 78 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC--SSC----CCSCCBCCHHHHTTHHHHTTC-HHHHHTTTCCEECE
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC--CCC----CCCCcccCcchHHHHHHHhCc-HHHHHHcCCccccC
Confidence 35899999999999999999999999999999952 110 0111111111111 1222221 000000 000
Q ss_pred hhHHhhc--------cCCC-ccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc--Ccc-
Q 048823 150 LQKRVLN--------TSRG-PAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF--FGM- 216 (699)
Q Consensus 150 i~~~~~~--------~s~g-~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~--dG~- 216 (699)
..+.+.. .... .........+++..+...|.+.+.+. |++++ +++|+++..+ ++++.+|.+. +|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~ 156 (512)
T 3e1t_A 79 GTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFE-GERAVGVRYRNTEGVE 156 (512)
T ss_dssp EEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEE-TTEEEEEEEECSSSCE
T ss_pred ceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCE
Confidence 0000000 0000 00111123578999999999999885 89987 6899999886 6777777654 574
Q ss_pred -EEecCeEEEecCCCCCC
Q 048823 217 -NFYAPSVVLTTGTFMSG 233 (699)
Q Consensus 217 -~i~Ad~VVlAtG~~~~~ 233 (699)
+++||.||+|+|.++..
T Consensus 157 ~~i~ad~VI~AdG~~S~v 174 (512)
T 3e1t_A 157 LMAHARFIVDASGNRTRV 174 (512)
T ss_dssp EEEEEEEEEECCCTTCSS
T ss_pred EEEEcCEEEECCCcchHH
Confidence 79999999999998643
No 65
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.09 E-value=4.4e-10 Score=128.75 Aligned_cols=154 Identities=25% Similarity=0.262 Sum_probs=90.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCc---------------cchhhHHHHhhcCc
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPA---------------KSQLVHEVDALGGE 140 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~---------------~~~l~~el~~lg~~ 140 (699)
..+||+|||||++|+++|+.|++.|++|+|+|+.... +.. ...+.|++. ...+..++...+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~-~~~-~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP-GGN-TKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRN 202 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS-CTT-GGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC-Ccc-hhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 3689999999999999999999999999999996211 110 001111110 01122222221211
Q ss_pred cc------hhhchhhhhHHhhcc----------CCCccc---cccc-cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEE
Q 048823 141 IG------KVADMCYLQKRVLNT----------SRGPAV---WALR-AQTDKREYAMRMKNIVESTANLCIR-EAMVTDI 199 (699)
Q Consensus 141 ~~------~~~d~~~i~~~~~~~----------s~g~~~---~~~r-~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l 199 (699)
.. .+.+.......|+.. ..+... ..+. .......+...|.+.+++. |++++ +++|++|
T Consensus 203 ~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~-gv~i~~~t~v~~l 281 (572)
T 1d4d_A 203 INDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKR-GTDIRLNSRVVRI 281 (572)
T ss_dssp CSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEEEEEE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHc-CCeEEecCEEEEE
Confidence 00 001111111111110 011000 0000 0123567888999999886 89998 6999999
Q ss_pred EecCC-CCEEEEEEc--Ccc--EEecCeEEEecCCCCCC
Q 048823 200 LLGKN-DNVEGVCTF--FGM--NFYAPSVVLTTGTFMSG 233 (699)
Q Consensus 200 ~~e~~-g~v~gV~t~--dG~--~i~Ad~VVlAtG~~~~~ 233 (699)
..+ + ++++||.+. +|+ +|.||.||+|||+|+..
T Consensus 282 ~~~-~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 282 LED-ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp EEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred EEC-CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 876 5 889998876 564 68999999999999764
No 66
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.08 E-value=3.1e-09 Score=116.38 Aligned_cols=56 Identities=16% Similarity=0.170 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 173 REYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 173 ~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
..+.+.|.+.+++. |++++ +++|++|..+ ++++.+|.+. |.++.||.||+|+|.+.
T Consensus 196 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~~~~gv~~~-g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISAN-GGKIHTGQEVSKILIE-NGKAAGIIAD-DRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TTEEEEEEET-TEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCceeEEEEE-CCEEEEEEEC-CEEEECCEEEECCCHHH
Confidence 34677788888886 78887 7999999987 6788888886 66899999999999874
No 67
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.08 E-value=7.8e-10 Score=123.76 Aligned_cols=34 Identities=32% Similarity=0.641 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|++||+.|++.|++|+|||++
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 4699999999999999999999999999999973
No 68
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.07 E-value=4.3e-10 Score=128.73 Aligned_cols=147 Identities=18% Similarity=0.084 Sum_probs=87.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhch--------
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADM-------- 147 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~-------- 147 (699)
.++||+|||||++|+++|+.|++.|++|+|||+.... ...++ +........+.++.+|-. ..+...
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~-~~~~r----~~~l~~~s~~~l~~lGl~-~~l~~~~~~~~~~~ 121 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP-VGHDR----AGALHIRTVETLDLRGLL-DRFLEGTQVAKGLP 121 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC-CCSSS----CCCBCHHHHHHHHTTTCH-HHHTTSCCBCSBCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC-CCCce----EEEECHHHHHHHHHcCCh-HHHHhcCcccCCce
Confidence 3589999999999999999999999999999985221 11111 111111223333433311 100000
Q ss_pred -hhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE--cCc-cEEecCe
Q 048823 148 -CYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT--FFG-MNFYAPS 222 (699)
Q Consensus 148 -~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t--~dG-~~i~Ad~ 222 (699)
.+.....+..............+++..+...|.+.+.+. |++++ +++|+++..+ ++.+ .|++ .+| .+++||.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~-~~~v-~v~~~~~~G~~~~~a~~ 198 (570)
T 3fmw_A 122 FAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQD-AEAV-EVTVAGPSGPYPVRARY 198 (570)
T ss_dssp BTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHH-TEECCBSCEEEECCBC-SSCE-EEEEEETTEEEEEEESE
T ss_pred eCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEc-CCeE-EEEEEeCCCcEEEEeCE
Confidence 000000000000000011122468889999999999886 89886 6999999875 3443 3555 678 6899999
Q ss_pred EEEecCCCC
Q 048823 223 VVLTTGTFM 231 (699)
Q Consensus 223 VVlAtG~~~ 231 (699)
||.|+|.++
T Consensus 199 vV~ADG~~S 207 (570)
T 3fmw_A 199 GVGCDGGRS 207 (570)
T ss_dssp EEECSCSSC
T ss_pred EEEcCCCCc
Confidence 999999984
No 69
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.07 E-value=8.6e-11 Score=132.20 Aligned_cols=33 Identities=30% Similarity=0.417 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|||+|||||++|++||+.|++.|++|+|||++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~ 40 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG 40 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 599999999999999999999999999999984
No 70
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.06 E-value=5.4e-10 Score=121.51 Aligned_cols=58 Identities=24% Similarity=0.340 Sum_probs=47.0
Q ss_pred ccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 169 QTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 169 ~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+++..+...|.+.+.+. |++++ +++|++|..+ ++. +.|.+.+| +++||.||+|+|+|
T Consensus 149 ~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~-~~~-v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAA-GATLRAGETVTELVPD-ADG-VSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEE-TTE-EEEEESSC-EEEEEEEEECCGGG
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEECCCEEEEEEEc-CCe-EEEEECCC-EEEcCEEEEcCCcC
Confidence 457788899999988886 78887 5999999875 444 44777666 79999999999998
No 71
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.05 E-value=5.5e-10 Score=125.86 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=51.4
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEEEecCCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVVLTTGTFM 231 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VVlAtG~~~ 231 (699)
+.+++..+...+.+.+.+. |++++ +++|+++..+ +++++|.+. +|+ +++||.||+|+|.|+
T Consensus 144 g~v~~~~l~~~l~~~a~~~-Gv~i~~~~~V~~l~~~--~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRK-GGEVLTRTRATSARRE--NGLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEECSEEEEEEEEE--TTEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred CEEcHHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEe--CCEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 4578999999999999887 88887 5999999875 478888884 565 799999999999983
No 72
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.04 E-value=9.5e-10 Score=123.96 Aligned_cols=149 Identities=15% Similarity=0.087 Sum_probs=90.8
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhch---hhh
Q 048823 74 IDERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADM---CYL 150 (699)
Q Consensus 74 ~~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~---~~i 150 (699)
++.++||+|||||++|+++|+.|++.|++|+|||+.... ...+| +........+.++.+|- ...+... ...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~-~~~~r----~~~l~~~~~~~l~~lGl-~~~~~~~~~~~~~ 81 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER-TGESR----GLGFTARTMEVFDQRGI-LPRFGEVETSTQG 81 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC--CCCCC----SEEECHHHHHHHHTTTC-GGGGCSCCBCCEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-CCCCC----cceECHHHHHHHHHCCC-HHHHHhccccccc
Confidence 456799999999999999999999999999999995221 11111 11111222333444441 1111110 000
Q ss_pred hHH--hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc---EEecCeEE
Q 048823 151 QKR--VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM---NFYAPSVV 224 (699)
Q Consensus 151 ~~~--~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~---~i~Ad~VV 224 (699)
.+. .+........+.....+++..+...|.+.+.+. |+++. +++|+++..+ ++.+ .|++.++. +++||.||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~-~~~v-~v~~~~~~g~~~~~a~~vV 158 (500)
T 2qa1_A 82 HFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDD-GAGV-TVEVRGPEGKHTLRAAYLV 158 (500)
T ss_dssp EETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHT-TCEEEETCEEEEEEEE-TTEE-EEEEEETTEEEEEEESEEE
T ss_pred cccceecccccCCCCCCceeecCHHHHHHHHHHHHHHC-CCEEECCcEEEEEEEc-CCeE-EEEEEcCCCCEEEEeCEEE
Confidence 000 000000000011112457788999999999887 78886 6999999876 4444 46676664 79999999
Q ss_pred EecCCCC
Q 048823 225 LTTGTFM 231 (699)
Q Consensus 225 lAtG~~~ 231 (699)
.|+|.++
T Consensus 159 gADG~~S 165 (500)
T 2qa1_A 159 GCDGGRS 165 (500)
T ss_dssp ECCCTTC
T ss_pred ECCCcch
Confidence 9999985
No 73
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.04 E-value=1.5e-09 Score=115.00 Aligned_cols=136 Identities=18% Similarity=0.111 Sum_probs=85.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHc--CCceeEEeeecccccCCCCC-CCCCC-CccchhhHHHHhhcCccchhhchhhhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARL--GAKTLLLTLNIDKIAWQPCN-PAVGG-PAKSQLVHEVDALGGEIGKVADMCYLQ 151 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~~~~~g~~~c~-~s~Gg-~~~~~l~~el~~lg~~~~~~~d~~~i~ 151 (699)
.++||+|||||++|+++|+.|++. |++|+|+|++....+...+. ..... .........++.+|-.+
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~---------- 133 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY---------- 133 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCC----------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccc----------
Confidence 458999999999999999999999 99999999952211111100 00000 00011122222222111
Q ss_pred HHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecC--C-C--CEEEEEEc------------
Q 048823 152 KRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGK--N-D--NVEGVCTF------------ 213 (699)
Q Consensus 152 ~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~--~-g--~v~gV~t~------------ 213 (699)
. ..+.... ..+...+...|.+.+.+.+|++++ ++.|+++..++ + + ++.||.+.
T Consensus 134 -~----~~g~~~~----~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~ 204 (326)
T 2gjc_A 134 -E----DEGDYVV----VKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQC 204 (326)
T ss_dssp -E----ECSSEEE----ESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CC
T ss_pred -c----cCCCeEE----EcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeeccccccee
Confidence 0 0011111 124567888899988887899998 59999998763 2 4 89999864
Q ss_pred --CccEEec---------------CeEEEecCCC
Q 048823 214 --FGMNFYA---------------PSVVLTTGTF 230 (699)
Q Consensus 214 --dG~~i~A---------------d~VVlAtG~~ 230 (699)
++.++.| +.||+|||.-
T Consensus 205 ~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~ 238 (326)
T 2gjc_A 205 CMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHD 238 (326)
T ss_dssp CCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC
T ss_pred ccCceEEEEeeccccccccccccCCEEEECcCCC
Confidence 2347899 9999999975
No 74
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.03 E-value=1.2e-09 Score=124.08 Aligned_cols=63 Identities=16% Similarity=0.028 Sum_probs=53.4
Q ss_pred ccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCC
Q 048823 169 QTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 169 ~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~ 232 (699)
.+++..+...|.+.+.+. |++++..+|+++..++++.+++|.+.+|.++.||.||+|+|.++.
T Consensus 161 ~i~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 161 HFDAHLVADFLKRWAVER-GVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred EEeHHHHHHHHHHHHHHC-CCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 578899999999999885 888875589999875456678899999988999999999999864
No 75
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.03 E-value=5.1e-10 Score=123.95 Aligned_cols=61 Identities=10% Similarity=0.047 Sum_probs=51.9
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEe---------------cCCCCEEEEEEcCccEE--ecCeEEEecCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILL---------------GKNDNVEGVCTFFGMNF--YAPSVVLTTGT 229 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~---------------e~~g~v~gV~t~dG~~i--~Ad~VVlAtG~ 229 (699)
..+++..+...|.+.+++. |++++ +++|++|.. + ++++++|.+.+| ++ .||.||+|+|+
T Consensus 176 ~~~~~~~l~~~L~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~-~~~v~~V~t~~g-~i~~~Ad~VV~AtG~ 252 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGA-GVEFIFGRRVVGVELKPRVELGIEGEPLPWQ-EARASAAVLSDG-TRVEVGEKLVVAAGV 252 (448)
T ss_dssp EECCHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEEESSCCCCTTSSCTTS-CEEEEEEEETTS-CEEEEEEEEEECCGG
T ss_pred eEEcHHHHHHHHHHHHHhC-CCEEEcCCeEEEEEecccccccccccccccC-CCceEEEEeCCC-EEeecCCEEEECCCc
Confidence 3568889999999999887 88887 599999987 4 567788999888 68 99999999999
Q ss_pred CC
Q 048823 230 FM 231 (699)
Q Consensus 230 ~~ 231 (699)
|+
T Consensus 253 ~s 254 (448)
T 3axb_A 253 WS 254 (448)
T ss_dssp GH
T ss_pred CH
Confidence 83
No 76
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.03 E-value=3.1e-09 Score=112.35 Aligned_cols=32 Identities=28% Similarity=0.397 Sum_probs=31.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+||+|||||++|+++|+.|++.|.+|+|+|+.
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~ 34 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECC
Confidence 79999999999999999999999999999996
No 77
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.03 E-value=1.6e-09 Score=122.94 Aligned_cols=150 Identities=17% Similarity=0.096 Sum_probs=89.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcC---------ccchh--
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGG---------EIGKV-- 144 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~---------~~~~~-- 144 (699)
.++||+|||||++|+++|+.|++.|.+|+|||+... ....++ ..++. ....+.++.+|- .....
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~-~~~~~~---~~~l~-~~~~~~l~~lGl~~~~~~~~~~~~~~~~ 78 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG-LSPYPR---AAGQN-PRTMELLRIGGVADEVVRADDIRGTQGD 78 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS-CCCCCC---SCCBC-HHHHHHHHHTTCHHHHHHSCCSSCTTSC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC-CCCCCc---cceEC-HHHHHHHHHcCCHHHHHhhCCCcccccc
Confidence 358999999999999999999999999999999622 111111 11111 122222333321 10000
Q ss_pred ------hchhhh-------hHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCC--EE
Q 048823 145 ------ADMCYL-------QKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDN--VE 208 (699)
Q Consensus 145 ------~d~~~i-------~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~--v~ 208 (699)
....+. .+.................+++..+...|.+.+.+. |++++ +++|+++..+++++ .+
T Consensus 79 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~~~v 157 (535)
T 3ihg_A 79 FVIRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKH-GGAIRFGTRLLSFRQHDDDAGAGV 157 (535)
T ss_dssp CEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEECGGGCSEE
T ss_pred eeeeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEECCCCccccE
Confidence 000000 000000000000001122468889999999999987 88887 69999998763211 34
Q ss_pred EEEEcCc---cEEecCeEEEecCCCC
Q 048823 209 GVCTFFG---MNFYAPSVVLTTGTFM 231 (699)
Q Consensus 209 gV~t~dG---~~i~Ad~VVlAtG~~~ 231 (699)
.|++.++ .+++||.||.|+|.++
T Consensus 158 ~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 158 TARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 4566665 6899999999999984
No 78
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.03 E-value=8.3e-10 Score=119.93 Aligned_cols=147 Identities=12% Similarity=0.054 Sum_probs=89.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccc-cCCCCCCCCCCCccchhhHHHHhhcCccchhhch----hh--
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKI-AWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADM----CY-- 149 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~-g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~----~~-- 149 (699)
++||+|||||++|+++|+.|++.|++|+|+|+..... ....| ++.......+.++.+|-. ..+... ..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~----~g~l~~~~~~~l~~lg~~-~~~~~~~~~~~~~~ 76 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIR----AGVLEQGMVDLLREAGVD-RRMARDGLVHEGVE 76 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCC----CCEECHHHHHHHHHTTCC-HHHHHHCEEESCEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCc----eEeECHHHHHHHHHcCCc-HHHHhcCCccceEE
Confidence 4799999999999999999999999999999852210 00111 111222233334444311 110000 00
Q ss_pred ---------hhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE-cCcc--
Q 048823 150 ---------LQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT-FFGM-- 216 (699)
Q Consensus 150 ---------i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t-~dG~-- 216 (699)
+.+.... .+. ....+++..+...|.+.+.+. +++++ +++|+++..+ ++..+.|++ .+|.
T Consensus 77 ~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~-~~~~~~v~~~~~g~~~ 148 (394)
T 1k0i_A 77 IAFAGQRRRIDLKRLS--GGK----TVTVYGQTEVTRDLMEAREAC-GATTVYQAAEVRLHDL-QGERPYVTFERDGERL 148 (394)
T ss_dssp EEETTEEEEECHHHHH--TSC----CEEECCHHHHHHHHHHHHHHT-TCEEESSCEEEEEECT-TSSSCEEEEEETTEEE
T ss_pred EEECCceEEecccccc--CCC----ceEEechHHHHHHHHHHHHhc-CCeEEeceeEEEEEEe-cCCceEEEEecCCcEE
Confidence 0000000 010 111346677888888888876 88887 6999999864 333345766 6886
Q ss_pred EEecCeEEEecCCCCCCcee
Q 048823 217 NFYAPSVVLTTGTFMSGKIW 236 (699)
Q Consensus 217 ~i~Ad~VVlAtG~~~~~~~~ 236 (699)
+++||.||.|+|.++..+-.
T Consensus 149 ~~~a~~vV~AdG~~S~vr~~ 168 (394)
T 1k0i_A 149 RLDCDYIAGCDGFHGISRQS 168 (394)
T ss_dssp EEECSEEEECCCTTCSTGGG
T ss_pred EEEeCEEEECCCCCcHHHHh
Confidence 79999999999999754433
No 79
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.02 E-value=5.3e-11 Score=132.80 Aligned_cols=32 Identities=31% Similarity=0.604 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
+|||+|||||++|+++|+.|++.|++|+|||+
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk 36 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE 36 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC
Confidence 59999999999999999999999999999998
No 80
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.01 E-value=1.5e-09 Score=124.23 Aligned_cols=63 Identities=13% Similarity=0.152 Sum_probs=51.3
Q ss_pred ccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEEEecCCCC
Q 048823 167 RAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVVLTTGTFM 231 (699)
Q Consensus 167 r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VVlAtG~~~ 231 (699)
.+++++..+...+.+.+.+. |++++ +++|+++..+ ++++++|++. +|. +++||.||+|+|+|+
T Consensus 182 dg~v~~~~l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 182 DFRNNDARLVIDNIKKAAED-GAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp CEECCHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred CCeEchHHHHHHHHHHHHHc-CCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 34578888888888888886 88888 5999999886 6788888864 343 799999999999993
No 81
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.01 E-value=1e-09 Score=123.71 Aligned_cols=63 Identities=16% Similarity=-0.030 Sum_probs=53.7
Q ss_pred ccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCC
Q 048823 169 QTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 169 ~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~ 232 (699)
.+++..+...|.+.+.+. |++++..+|+++..++++.+++|++.+|+++.||.||+|+|.++.
T Consensus 169 ~~~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 169 HFDADEVARYLSEYAIAR-GVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred EEcHHHHHHHHHHHHHHC-CCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 578999999999999885 888874499999875456778899999988999999999999864
No 82
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.01 E-value=1.5e-09 Score=122.32 Aligned_cols=147 Identities=14% Similarity=-0.015 Sum_probs=90.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhch---hhhhH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADM---CYLQK 152 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~---~~i~~ 152 (699)
.++||+|||||++|+++|+.|++.|++|+|||+.... ...+| +........+.++.+|- ...+... ....+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~-~~~~r----~~~l~~~~~~~l~~lGl-~~~~~~~~~~~~~~~ 84 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR-TGESR----GLGFTARTMEVFDQRGI-LPAFGPVETSTQGHF 84 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC-CCCCC----SEEECHHHHHHHHHTTC-GGGGCSCCEESEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC-CCCCc----eeEECHHHHHHHHHCCC-HHHHHhcccccccee
Confidence 4699999999999999999999999999999995221 11111 11111222333444442 1111110 00000
Q ss_pred H--hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc---EEecCeEEEe
Q 048823 153 R--VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM---NFYAPSVVLT 226 (699)
Q Consensus 153 ~--~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~---~i~Ad~VVlA 226 (699)
. .+........+.....+++..+...|.+.+.+. |+++. +++|+++..+ ++.+ .|++.+|. +++||.||.|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~-~~~v-~v~~~~~~g~~~~~a~~vVgA 161 (499)
T 2qa2_A 85 GGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDE-GDHV-VVEVEGPDGPRSLTTRYVVGC 161 (499)
T ss_dssp TTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEEEC-SSCE-EEEEECSSCEEEEEEEEEEEC
T ss_pred cceecccccCCCCCCceEecCHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEe-CCEE-EEEEEcCCCcEEEEeCEEEEc
Confidence 0 000000000011112457888999999999887 78886 6999999876 4444 47777764 7999999999
Q ss_pred cCCCC
Q 048823 227 TGTFM 231 (699)
Q Consensus 227 tG~~~ 231 (699)
+|.++
T Consensus 162 DG~~S 166 (499)
T 2qa2_A 162 DGGRS 166 (499)
T ss_dssp CCTTC
T ss_pred cCccc
Confidence 99985
No 83
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.00 E-value=3.5e-10 Score=131.34 Aligned_cols=155 Identities=19% Similarity=0.187 Sum_probs=86.0
Q ss_pred CCcccEEEECCChHHHHHHHHHH---H-cCCceeEEeeecccc-cC-----CCCCCCCCC-------CccchhhHHHHhh
Q 048823 75 DERFDVIVVGGGHAGCEAALASA---R-LGAKTLLLTLNIDKI-AW-----QPCNPAVGG-------PAKSQLVHEVDAL 137 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LA---r-~G~kV~LlE~~~~~~-g~-----~~c~~s~Gg-------~~~~~l~~el~~l 137 (699)
+.++||||||||+||++||+.|+ + .|.+|+||||..... +. ..|+...+. .....+.+.....
T Consensus 20 ~~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~ 99 (643)
T 1jnr_A 20 VVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLD 99 (643)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHH
T ss_pred eccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHH
Confidence 34699999999999999999999 6 899999999963110 00 001111100 0001111221111
Q ss_pred c-Cccc-----hhhchhhhhHHhhccC--------CCcccccccc----ccCHHHHHHHHHHHHHccCCe-EEE-eeEEE
Q 048823 138 G-GEIG-----KVADMCYLQKRVLNTS--------RGPAVWALRA----QTDKREYAMRMKNIVESTANL-CIR-EAMVT 197 (699)
Q Consensus 138 g-~~~~-----~~~d~~~i~~~~~~~s--------~g~~~~~~r~----~~d~~~~~~~L~~~l~~~~gv-~i~-~~~V~ 197 (699)
+ +... .+.+...-...++... .+.. .++. .++...+...|.+.+++.+|+ +++ ++.|+
T Consensus 100 g~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~--~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~ 177 (643)
T 1jnr_A 100 MMGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKY--VREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIF 177 (643)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCB--CBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEE
T ss_pred hcCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCc--cCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEE
Confidence 1 1100 0011111111111110 0100 0000 112334666777777665478 787 69999
Q ss_pred EEEecCCC---CEEEEEE---cCcc--EEecCeEEEecCCCCC
Q 048823 198 DILLGKND---NVEGVCT---FFGM--NFYAPSVVLTTGTFMS 232 (699)
Q Consensus 198 ~l~~e~~g---~v~gV~t---~dG~--~i~Ad~VVlAtG~~~~ 232 (699)
+|..+ ++ +|+||.+ .+|. .|.|+.||+|||+++.
T Consensus 178 ~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 178 ELLKD-NNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp EEEEC-TTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred EEEEc-CCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 99886 45 8999875 4565 6899999999999965
No 84
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.99 E-value=8.2e-10 Score=132.06 Aligned_cols=60 Identities=25% Similarity=0.190 Sum_probs=52.7
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+++..+...|.+.+++. |++++ +++|++|..+ ++++++|.+.+| ++.||.||+|+|.|
T Consensus 146 g~v~p~~l~~~L~~~a~~~-Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G-~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESA-GVTYRGSTTVTGIEQS-GGRVTGVQTADG-VIPADIVVSCAGFW 206 (830)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TTEEEEEEETTE-EEECSEEEECCGGG
T ss_pred ceEcHHHHHHHHHHHHHHc-CCEEECCceEEEEEEe-CCEEEEEEECCc-EEECCEEEECCccc
Confidence 3468899999999999887 88887 6999999876 677888999888 79999999999998
No 85
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.99 E-value=1.2e-09 Score=118.29 Aligned_cols=141 Identities=16% Similarity=0.035 Sum_probs=87.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhh--hhHHh
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCY--LQKRV 154 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~--i~~~~ 154 (699)
.+||+|||||++|+++|+.|++.|.+|+|+|+... .+..+| +........+.++.+|- ...+..... ....+
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~-~~~~~~----~~~l~~~~~~~l~~~g~-~~~~~~~~~~~~~~~~ 84 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE-LRAFGA----GIYLWHNGLRVLEGLGA-LDDVLQGSHTPPTYET 84 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-CCCCSS----EEEEEHHHHHHHHHTTC-HHHHHTTCBCCSCEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCCCCc----eEEeCccHHHHHHHcCC-HHHHHhhCCCccceEE
Confidence 58999999999999999999999999999998521 111011 11111122233333331 100000000 00000
Q ss_pred hccCCCccc------cccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEec
Q 048823 155 LNTSRGPAV------WALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTT 227 (699)
Q Consensus 155 ~~~s~g~~~------~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAt 227 (699)
... |... ..+...+++..+...|.+.+.+. |++++ +++|+++.. ++ .|++.+|.++.||.||+|+
T Consensus 85 ~~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~Ad 156 (379)
T 3alj_A 85 WMH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARAL-GVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGAD 156 (379)
T ss_dssp EET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHT-TCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECC
T ss_pred EeC--CceeeeccCCCCceEEECHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECC
Confidence 000 0000 01122467889999999999886 89987 689999974 33 6788889899999999999
Q ss_pred CCCC
Q 048823 228 GTFM 231 (699)
Q Consensus 228 G~~~ 231 (699)
|.++
T Consensus 157 G~~s 160 (379)
T 3alj_A 157 GVGS 160 (379)
T ss_dssp CTTC
T ss_pred CccH
Confidence 9985
No 86
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.99 E-value=2.2e-09 Score=122.31 Aligned_cols=64 Identities=22% Similarity=0.100 Sum_probs=54.3
Q ss_pred ccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCC
Q 048823 169 QTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 169 ~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~ 232 (699)
.+++..+...|.+.+.+.+|++++..+|+++..++++.+++|.+.+|.++.||.||+|+|.++.
T Consensus 190 ~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 190 HFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp EECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred EEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 4789999999999998876888874499999875456788899999988999999999999853
No 87
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.97 E-value=3.9e-10 Score=123.52 Aligned_cols=59 Identities=8% Similarity=0.014 Sum_probs=44.7
Q ss_pred cccCHHHHHHHHHHHHHccCCeEEE-eeEEE---------EEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 168 AQTDKREYAMRMKNIVESTANLCIR-EAMVT---------DILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 168 ~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~---------~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+++..+...|.+.+++. |++++ +++|+ ++..+ ++++ +|.+.+| ++.||.||+|+|.|
T Consensus 167 g~v~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g-~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQ-GAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETR-QIRAGVIIVAAGAA 235 (405)
T ss_dssp EEECHHHHHHHHHHHHHTT-TCEEECSCEEEEETTEEEEECBCC---------CBCCE-EEEEEEEEECCGGG
T ss_pred EEEcHHHHHHHHHHHHHHC-CCEEEcCCEEEeccccccccceEee-CCeE-EEEECCc-EEECCEEEECCCcc
Confidence 3568889999999999886 88887 68998 88755 4555 7877777 79999999999998
No 88
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.96 E-value=6.8e-09 Score=117.64 Aligned_cols=64 Identities=9% Similarity=0.088 Sum_probs=52.9
Q ss_pred ccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCCC
Q 048823 169 QTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 169 ~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~~ 232 (699)
.+++..+...|.+.+.+..|++++..+|+++..++++.+++|.+.+|.++.||.||+|+|.++.
T Consensus 171 ~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 171 HLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp EECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred EEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 5789999999999998833888875579999876445677888888778999999999999864
No 89
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.95 E-value=2.2e-09 Score=116.04 Aligned_cols=59 Identities=14% Similarity=0.192 Sum_probs=48.5
Q ss_pred ccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 169 QTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 169 ~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.+++..+...|.+.+++. |++++ +++|+++..+ ++. +.|.+.+| ++.||.||+|+|.|+
T Consensus 146 ~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~-~~~-~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEAR-GAKVLTHTRVEDFDIS-PDS-VKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEC-SSC-EEEEETTE-EEEEEEEEECCGGGH
T ss_pred EEeHHHHHHHHHHHHHHC-CCEEEcCcEEEEEEec-CCe-EEEEeCCC-EEEeCEEEEecCccH
Confidence 457788999999999887 88887 5899999875 344 55777777 799999999999983
No 90
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.95 E-value=5.7e-10 Score=122.15 Aligned_cols=49 Identities=14% Similarity=0.076 Sum_probs=39.6
Q ss_pred ccCcccccCCCCCEEEecccCCC---chHHHHHHHHHHHHHHHHHHhcCCCC
Q 048823 397 QCYRSLMTKKVEGLFFSGQINGT---TGYEEAAAQGIISGINAARHSDGKSL 445 (699)
Q Consensus 397 ~l~~~letk~i~gLf~AGqi~G~---~Gy~eA~a~G~~Ag~naa~~~~~~~~ 445 (699)
.++++++++..||+|++||+++. .-...|..||.+||.|++..+.+.++
T Consensus 289 ~vd~~~~~~~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~~~~ 340 (409)
T 3h8l_A 289 PTDLNMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTK 340 (409)
T ss_dssp CBBTTSBBSSCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred EeCcccccCCCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 35678999789999999999974 33468999999999999999844443
No 91
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.95 E-value=1.1e-10 Score=128.99 Aligned_cols=50 Identities=8% Similarity=0.005 Sum_probs=42.3
Q ss_pred ccCcccccCCCCCEEEecccCCCch-------------HHHHHHHHHHHHHHHHHHhcCCCCc
Q 048823 397 QCYRSLMTKKVEGLFFSGQINGTTG-------------YEEAAAQGIISGINAARHSDGKSLI 446 (699)
Q Consensus 397 ~l~~~letk~i~gLf~AGqi~G~~G-------------y~eA~a~G~~Ag~naa~~~~~~~~~ 446 (699)
.++++|+++..||+|++||+.+..+ -..|..||.+||.|+++.+.|+++-
T Consensus 276 ~Vd~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~~~~ 338 (430)
T 3h28_A 276 IVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPDK 338 (430)
T ss_dssp CCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred ecCccccCCCCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 3567899978999999999987532 3679999999999999999998763
No 92
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.93 E-value=2.1e-09 Score=120.31 Aligned_cols=148 Identities=20% Similarity=0.198 Sum_probs=82.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCc---------cchhhHHHHhhcCccc-----hh
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPA---------KSQLVHEVDALGGEIG-----KV 144 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~---------~~~l~~el~~lg~~~~-----~~ 144 (699)
||||||||++|++||+.|++.|.+|+|||+. ...+. ...+.|++. ..++...+..-.+... .+
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~--s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~ 77 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS--TPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYV 77 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS--GGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch--HHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHH
Confidence 8999999999999999999999999999996 21111 011122221 0111111111111000 00
Q ss_pred hchhhhhHHhhcc-----CC----Cccccccc----cccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEE
Q 048823 145 ADMCYLQKRVLNT-----SR----GPAVWALR----AQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGV 210 (699)
Q Consensus 145 ~d~~~i~~~~~~~-----s~----g~~~~~~r----~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV 210 (699)
.+...-...++.. .. .+....++ .......+...|.+.+++ .|++++ ++.| ++..+ ++++.||
T Consensus 78 ~~~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~-~gv~i~~~~~v-~l~~~-~~~v~Gv 154 (472)
T 2e5v_A 78 TSEAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLARE-EGIPIIEDRLV-EIRVK-DGKVTGF 154 (472)
T ss_dssp HHHHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHH-TTCCEECCCEE-EEEEE-TTEEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHh-CCCEEEECcEE-EEEEe-CCEEEEE
Confidence 0000000111100 00 00000011 122356778888888855 489988 5889 99876 6788888
Q ss_pred EEcC-ccEEecCeEEEecCCCCC
Q 048823 211 CTFF-GMNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 211 ~t~d-G~~i~Ad~VVlAtG~~~~ 232 (699)
.+.+ +.++.||.||+|||+++.
T Consensus 155 ~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 155 VTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp EETTTEEECCCSEEEECCCCCGG
T ss_pred EEEeCCCeEEeeeEEECCCCCcc
Confidence 7642 235889999999999864
No 93
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.93 E-value=3.1e-09 Score=119.68 Aligned_cols=136 Identities=17% Similarity=0.177 Sum_probs=87.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
..+||+|||||++|+++|+.|++.|.+|+|||+... .+ .|+. .+ ......+.++.+|.. +.. ..+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~-~g--~~~~-~~--~~~~~~~~l~~~g~~-----~~~---~~~- 155 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK-FS--RHNV-LH--LWPFTIHDLRALGAK-----KFY---GRF- 155 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS-CC--CCCE-EE--CCHHHHHHHHTTTHH-----HHC---TTT-
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc-cC--CCCc-cc--CChhHHHHHHHcCCc-----ccc---ccc-
Confidence 458999999999999999999999999999998521 11 1210 00 011222333333310 000 000
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecC-CCCEEEEEE--c-Cc--cEEecCeEEEecC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGK-NDNVEGVCT--F-FG--MNFYAPSVVLTTG 228 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~-~g~v~gV~t--~-dG--~~i~Ad~VVlAtG 228 (699)
.+.....++...+...|.+.+.+. |++++ +++|+++..++ ++..++|.+ . +| .++.||.||+|||
T Consensus 156 -------~~~~~~~~~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G 227 (497)
T 2bry_A 156 -------CTGTLDHISIRQLQLLLLKVALLL-GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAG 227 (497)
T ss_dssp -------TCTTCCEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCC
T ss_pred -------cccccccCCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCC
Confidence 000011345677888898888885 88886 69999998641 244566776 4 66 4799999999999
Q ss_pred CCCCCc
Q 048823 229 TFMSGK 234 (699)
Q Consensus 229 ~~~~~~ 234 (699)
+++..+
T Consensus 228 ~~S~~r 233 (497)
T 2bry_A 228 GKFVPE 233 (497)
T ss_dssp TTCCCT
T ss_pred CCcccc
Confidence 987543
No 94
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.93 E-value=2.9e-09 Score=116.01 Aligned_cols=146 Identities=16% Similarity=0.055 Sum_probs=86.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCC-ccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGP-AKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~-~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.+||+|||||++|+++|+.|++.|++|+|+|+...... ...++. ......+.++.+|-.. ...........+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~-----~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~ 78 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLS-----GFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYV 78 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCC-----CCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC-----ccccccccChhHHHHHHHcCCcc-ccccccccceEEE
Confidence 48999999999999999999999999999998522100 111111 1223344455554221 0000000000011
Q ss_pred ccCCCcccc---ccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 156 NTSRGPAVW---ALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 156 ~~s~g~~~~---~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
....+.... .+....++..+...|.+.+ ++++++ +++|+++..+ ++. +.|++.+|.++.||.||+|+|.++
T Consensus 79 ~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~-~~~-v~v~~~~g~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 79 DALTGERVGSVPADWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQD-SET-VQMRFSDGTKAEANWVIGADGGAS 153 (397)
T ss_dssp ETTTCCEEEEEECCCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEEC-SSC-EEEEETTSCEEEESEEEECCCTTC
T ss_pred ecCCCCccccccCcccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEec-CCE-EEEEECCCCEEECCEEEECCCcch
Confidence 110111000 0001234556677777665 477776 6999999876 344 458888998999999999999986
Q ss_pred CC
Q 048823 232 SG 233 (699)
Q Consensus 232 ~~ 233 (699)
..
T Consensus 154 ~v 155 (397)
T 2vou_A 154 VV 155 (397)
T ss_dssp HH
T ss_pred hH
Confidence 43
No 95
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.93 E-value=2.4e-09 Score=116.70 Aligned_cols=152 Identities=13% Similarity=0.127 Sum_probs=86.7
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhh-hhHHh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCY-LQKRV 154 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~-i~~~~ 154 (699)
..+||+|||||++|+++|+.|++.|.+|+|+|+.... +...|...+. .......+.++.+|- ...+..... ....+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~-~~~~~g~~~~-~~~~~~~~~l~~~gl-~~~~~~~~~~~~~~~ 101 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR-EARIFGGTLD-LHKGSGQEAMKKAGL-LQTYYDLALPMGVNI 101 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST-TCCCCSCCEE-CCTTTHHHHHHHTTC-HHHHHHHCBCCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc-cccccCCeee-eCCccHHHHHHhcCh-HHHHHHhhcccceEE
Confidence 4589999999999999999999999999999996221 1111110000 001111222333321 110000000 00000
Q ss_pred hccCCCccc---------cccccccCHHHHHHHHHHHHHccCCeEE-EeeEEEEEEecCCCCEEEEEEcCccEEecCeEE
Q 048823 155 LNTSRGPAV---------WALRAQTDKREYAMRMKNIVESTANLCI-REAMVTDILLGKNDNVEGVCTFFGMNFYAPSVV 224 (699)
Q Consensus 155 ~~~s~g~~~---------~~~r~~~d~~~~~~~L~~~l~~~~gv~i-~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VV 224 (699)
... .|... ......+++..+.+.|.+.+.+ +.+ ++++|+++..+ ++. +.|++.+|.+++||.||
T Consensus 102 ~~~-~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~-~~~-v~v~~~~g~~~~ad~vV 175 (398)
T 2xdo_A 102 ADE-KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEPG-KKK-WTLTFENKPSETADLVI 175 (398)
T ss_dssp ECS-SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEEC-SSS-EEEEETTSCCEEESEEE
T ss_pred ECC-CCCchhhccccccCCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEEC-CCE-EEEEECCCcEEecCEEE
Confidence 000 00000 0001135777888888776643 344 47999999876 344 45888899889999999
Q ss_pred EecCCCCCCcee
Q 048823 225 LTTGTFMSGKIW 236 (699)
Q Consensus 225 lAtG~~~~~~~~ 236 (699)
+|+|.++..+-+
T Consensus 176 ~AdG~~S~vR~~ 187 (398)
T 2xdo_A 176 LANGGMSKVRKF 187 (398)
T ss_dssp ECSCTTCSCCTT
T ss_pred ECCCcchhHHhh
Confidence 999998765543
No 96
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.93 E-value=2.4e-09 Score=117.14 Aligned_cols=146 Identities=20% Similarity=0.175 Sum_probs=85.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCc-eeEEeeecccccCCCCCCCCCCC-ccchhhHHHHhhcCccchhhchh-h-hh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAK-TLLLTLNIDKIAWQPCNPAVGGP-AKSQLVHEVDALGGEIGKVADMC-Y-LQ 151 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~k-V~LlE~~~~~~g~~~c~~s~Gg~-~~~~l~~el~~lg~~~~~~~d~~-~-i~ 151 (699)
..+||+|||||++|+++|+.|++.|.+ |+|+|+... .+..+ .+. ......+.++.+|- ...+.... . ..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~-~~~~g-----~g~~l~~~~~~~l~~lg~-~~~l~~~~~~~~~ 75 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE-IRPLG-----VGINIQPAAVEALAELGL-GPALAATAIPTHE 75 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS-CCCCS-----CEEEECHHHHHHHHHTTC-HHHHHHHSEEECE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC-cccce-----eEEEEChHHHHHHHHCCC-hHHHHhhCCCcce
Confidence 358999999999999999999999999 999998521 11100 111 11222333444431 11000000 0 00
Q ss_pred HHhhccCCCc-----------cccccccccCHHHHHHHHHHHHHcc-CCeEEE-eeEEEEEEecCCCCEEEEEEcC---c
Q 048823 152 KRVLNTSRGP-----------AVWALRAQTDKREYAMRMKNIVEST-ANLCIR-EAMVTDILLGKNDNVEGVCTFF---G 215 (699)
Q Consensus 152 ~~~~~~s~g~-----------~~~~~r~~~d~~~~~~~L~~~l~~~-~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G 215 (699)
..+... .|. ....+...+++..+...|.+.+.+. +.++++ +++|+++.. ++ .+ .|.+.+ |
T Consensus 76 ~~~~~~-~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-~v-~v~~~~~~~g 151 (410)
T 3c96_A 76 LRYIDQ-SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RD-GR-VLIGARDGHG 151 (410)
T ss_dssp EEEECT-TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-TE-EEEEEEETTS
T ss_pred EEEEcC-CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-cc-EEEEecCCCC
Confidence 000000 000 0001112457888999999888763 445564 799999976 33 33 355554 7
Q ss_pred --cEEecCeEEEecCCCCC
Q 048823 216 --MNFYAPSVVLTTGTFMS 232 (699)
Q Consensus 216 --~~i~Ad~VVlAtG~~~~ 232 (699)
.++.||.||.|+|.++.
T Consensus 152 ~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 152 KPQALGADVLVGADGIHSA 170 (410)
T ss_dssp CEEEEEESEEEECCCTTCH
T ss_pred CceEEecCEEEECCCccch
Confidence 57999999999999863
No 97
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.90 E-value=5.1e-09 Score=112.19 Aligned_cols=119 Identities=17% Similarity=0.159 Sum_probs=81.8
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
+..+||+|||||++|+++|+.|++.|++|+|||+. +..||... . ..... ...+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~----------~~~gg~~~----~---~~~~~--~~~~-------- 64 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESM----------PQLGGQLA----A---LYPEK--HIYD-------- 64 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS----------SSSCHHHH----H---TCTTS--EECC--------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecC----------CCCCCccc----c---cCCCc--cccc--------
Confidence 34699999999999999999999999999999984 22222110 0 00000 0000
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.+... ..++..+...+.+.+.+. ++.++ +++|+.+..+ ++..+.|.+.+|.++.+|.||+|||..+
T Consensus 65 -----~~~~~----~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 65 -----VAGFP----EVPAIDLVESLWAQAERY-NPDVVLNETVTKYTKL-DDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp -----STTCS----SEEHHHHHHHHHHHHHTT-CCEEECSCCEEEEEEC-TTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred -----CCCCC----CCCHHHHHHHHHHHHHHh-CCEEEcCCEEEEEEEC-CCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 00000 234567778888888876 78876 6899999875 3335668888888899999999999853
No 98
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.89 E-value=4.8e-09 Score=119.42 Aligned_cols=134 Identities=18% Similarity=0.126 Sum_probs=85.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhh--hhHH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCY--LQKR 153 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~--i~~~ 153 (699)
.++||+|||||++|+++|+.|++.|.+|+|||++ +.+||... ...+.+...+... ..+.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~----------~~~GGtw~---------~~~yPg~~~d~~~~~y~~~ 68 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAG----------EDVGGTWY---------WNRYPGCRLDTESYAYGYF 68 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS----------SSSCTHHH---------HCCCTTCBCSSCHHHHCHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCC----------CCCCCccc---------cCCCCceeecCchhhcccc
Confidence 3589999999999999999999999999999995 22233210 0001110011000 0111
Q ss_pred hhcc-CCCccccccccccCHHHHHHHHHHHHHccCCe--EE-EeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCC
Q 048823 154 VLNT-SRGPAVWALRAQTDKREYAMRMKNIVESTANL--CI-REAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGT 229 (699)
Q Consensus 154 ~~~~-s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv--~i-~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~ 229 (699)
+... ..+. .+ .....+...+...+.+.+++. ++ .+ ++++|+++..++++..+.|.+.+|+++.||.||+|||.
T Consensus 69 f~~~~~~~~-~~-~~~~~~~~ei~~yl~~~~~~~-~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~ 145 (545)
T 3uox_A 69 ALKGIIPEW-EW-SENFASQPEMLRYVNRAADAM-DVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGP 145 (545)
T ss_dssp HHTTSSTTC-CC-SBSSCBHHHHHHHHHHHHHHH-TCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCS
T ss_pred cCcccccCC-Cc-cccCCCHHHHHHHHHHHHHHc-CCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 0000 0000 00 111345667778888877776 44 34 47899999876455678899999999999999999997
Q ss_pred CC
Q 048823 230 FM 231 (699)
Q Consensus 230 ~~ 231 (699)
++
T Consensus 146 ~s 147 (545)
T 3uox_A 146 LS 147 (545)
T ss_dssp CB
T ss_pred CC
Confidence 54
No 99
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.87 E-value=2.8e-09 Score=121.23 Aligned_cols=134 Identities=22% Similarity=0.256 Sum_probs=85.8
Q ss_pred CcccEEEECCChHHHHHHHHHH-HcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 76 ERFDVIVVGGGHAGCEAALASA-RLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LA-r~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
.++||+|||||++|+++|+.|+ +.|.+|+|+|++ +..||..... ...+.. .+. ....
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~----------~~~GGtw~~~------~ypg~~---~d~---~s~~ 64 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKA----------DGPGGTWYWN------RYPGAL---SDT---ESHL 64 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESS----------SSSCTHHHHC------CCTTCE---EEE---EGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECC----------CCCCCccccc------CCCCce---ecC---Ccce
Confidence 3589999999999999999999 999999999995 2223221000 000000 000 0000
Q ss_pred hccCCC-----ccccccccccCHHHHHHHHHHHHHccCCe--EE-EeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEe
Q 048823 155 LNTSRG-----PAVWALRAQTDKREYAMRMKNIVESTANL--CI-REAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLT 226 (699)
Q Consensus 155 ~~~s~g-----~~~~~~r~~~d~~~~~~~L~~~l~~~~gv--~i-~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlA 226 (699)
+..+.. ...| .....+...+...+.+.+++. ++ .+ ++++|+++..++++..+.|.+.+|+++.||.||+|
T Consensus 65 ~~~~~~~~~~~~~~~-~~~~~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~A 142 (540)
T 3gwf_A 65 YRFSFDRDLLQESTW-KTTYITQPEILEYLEDVVDRF-DLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNA 142 (540)
T ss_dssp SSCCSCHHHHHHCCC-SBSEEEHHHHHHHHHHHHHHT-TCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEEC
T ss_pred eeeccccccccCCCC-cccCCCHHHHHHHHHHHHHHc-CCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEEC
Confidence 000000 0000 011235667888888888887 55 45 47999999877455678899999989999999999
Q ss_pred cCCCCCC
Q 048823 227 TGTFMSG 233 (699)
Q Consensus 227 tG~~~~~ 233 (699)
||.++..
T Consensus 143 tG~~s~p 149 (540)
T 3gwf_A 143 VGLLSAI 149 (540)
T ss_dssp CCSCCSB
T ss_pred CcccccC
Confidence 9976543
No 100
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.86 E-value=6.1e-09 Score=120.89 Aligned_cols=151 Identities=15% Similarity=0.065 Sum_probs=88.5
Q ss_pred CCcccEEEECCChHHHHHHHHHHH-cCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhch----hh
Q 048823 75 DERFDVIVVGGGHAGCEAALASAR-LGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADM----CY 149 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr-~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~----~~ 149 (699)
+.++||+|||||++|+++|+.|++ .|++|+|||+.... ...++ +........+-++.+|-. ..+... ..
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~-~~~g~----a~~l~~~t~e~l~~lGl~-~~~~~~~~~~~~ 103 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP-MELGQ----ADGIACRTMEMFEAFEFA-DSILKEACWIND 103 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC-CSSCS----CCEECHHHHHHHHHTTCH-HHHHHHSEEECE
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC-CCCCc----eeeeCHHHHHHHHHcCcH-HHHHHhcccccc
Confidence 346999999999999999999999 99999999995221 11111 111111122233333311 000000 00
Q ss_pred hh---------HHh-----hccCCCccccccccccCHHHHHHHHHHHHHccC-CeEEE-eeEEEEEEecCC--CCEEEEE
Q 048823 150 LQ---------KRV-----LNTSRGPAVWALRAQTDKREYAMRMKNIVESTA-NLCIR-EAMVTDILLGKN--DNVEGVC 211 (699)
Q Consensus 150 i~---------~~~-----~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~-gv~i~-~~~V~~l~~e~~--g~v~gV~ 211 (699)
.. ... +........+.....+++..+...|.+.+.+.+ ++++. +++|+++..+++ +..+.|+
T Consensus 104 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~ 183 (639)
T 2dkh_A 104 VTFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVT 183 (639)
T ss_dssp EEEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEE
T ss_pred eEEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEE
Confidence 00 000 000000000111224678899999999999985 45775 799999987632 2245565
Q ss_pred Ec------Cc--cEEecCeEEEecCCCC
Q 048823 212 TF------FG--MNFYAPSVVLTTGTFM 231 (699)
Q Consensus 212 t~------dG--~~i~Ad~VVlAtG~~~ 231 (699)
+. +| .+++||.||.|+|.++
T Consensus 184 ~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 184 LERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp EEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred EEeccccCCCCeEEEEeCEEEECCCcch
Confidence 54 46 4799999999999985
No 101
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.86 E-value=3.9e-09 Score=120.08 Aligned_cols=138 Identities=18% Similarity=0.123 Sum_probs=83.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCC--CCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQ--PCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKR 153 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~--~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~ 153 (699)
.++||+|||||++|+++|+.|++.|.+|+|+|++..-.|.. .|.+.......... ..+ .+... . ..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~-------~~~--~f~~~--~-~~ 82 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIE-------YCY--SFSEE--V-LQ 82 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTT-------SSC--CSCHH--H-HH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccc-------ccc--ccChh--h-hh
Confidence 46999999999999999999999999999999852111100 11111100000000 000 00000 0 00
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccC-CeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTA-NLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~-gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.... .....+...+...+...+++.+ ++.+. +++|+++..++++..+.|.+.+|+++.||.||+|||.++
T Consensus 83 ~~~~--------~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s 154 (542)
T 1w4x_A 83 EWNW--------TERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLS 154 (542)
T ss_dssp HCCC--------CBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCC
T ss_pred ccCc--------ccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCC
Confidence 0000 0112345667777777777653 24454 789999987644557789999998899999999999875
Q ss_pred CC
Q 048823 232 SG 233 (699)
Q Consensus 232 ~~ 233 (699)
..
T Consensus 155 ~p 156 (542)
T 1w4x_A 155 VP 156 (542)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 102
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.85 E-value=4e-09 Score=120.12 Aligned_cols=133 Identities=22% Similarity=0.226 Sum_probs=83.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhc---hhhhhH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVAD---MCYLQK 152 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d---~~~i~~ 152 (699)
.++||+|||||++|+++|+.|++.|.+|+|||++. ..||..... ...+....... ...+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~----------~~GGtw~~~------~ypg~~~dv~s~~y~~~f~~ 83 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS----------GVGGVWYWN------RYPGARCDVESIDYSYSFSP 83 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS----------SSCTHHHHC------CCTTCBCSSCTTTSSCCSCH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC----------CCCCccccC------CCCCceeCCCchhccccccc
Confidence 46899999999999999999999999999999952 222211000 00000000000 000000
Q ss_pred HhhccCCCccccccccccCHHHHHHHHHHHHHccCCe--EEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCC
Q 048823 153 RVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANL--CIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGT 229 (699)
Q Consensus 153 ~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv--~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~ 229 (699)
..... . .+ .....+...+...+.+.+++. ++ .+. +++|+++..++++..+.|.+.+|+++.||.||+|||.
T Consensus 84 ~~~~~-~---~~-~~~~~~~~ei~~yl~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~ 157 (549)
T 4ap3_A 84 ELEQE-W---NW-SEKYATQPEILAYLEHVADRF-DLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGP 157 (549)
T ss_dssp HHHHH-C---CC-SSSSCBHHHHHHHHHHHHHHT-TCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCS
T ss_pred ccccC-C---CC-ccCCCCHHHHHHHHHHHHHHc-CCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCC
Confidence 00000 0 00 011245667888888888887 55 444 7899999877555678899999999999999999996
Q ss_pred C
Q 048823 230 F 230 (699)
Q Consensus 230 ~ 230 (699)
+
T Consensus 158 ~ 158 (549)
T 4ap3_A 158 L 158 (549)
T ss_dssp E
T ss_pred C
Confidence 4
No 103
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.84 E-value=1.1e-08 Score=108.20 Aligned_cols=116 Identities=18% Similarity=0.204 Sum_probs=79.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.++||+|||||++|+++|+.|++.|++|+|+|++ +..||... . ...... ..+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~----------~~~gg~~~----~---~~~~~~--~~~--------- 55 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPL----------PEPGGQLT----A---LYPEKY--IYD--------- 55 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS----------SSSCHHHH----H---TCTTSE--ECC---------
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC----------CCCCCeee----c---cCCCce--eec---------
Confidence 4589999999999999999999999999999984 22222110 0 000000 000
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
-+.. ...++..+...+.+.+.+. ++.++ +++|+.+..+ ++ .+.|.+.+|.++.+|.||+|||..
T Consensus 56 ----~~~~----~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~-~~-~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 56 ----VAGF----PKVYAKDLVKGLVEQVAPF-NPVYSLGERAETLERE-GD-LFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp ----STTC----SSEEHHHHHHHHHHHHGGG-CCEEEESCCEEEEEEE-TT-EEEEEETTSCEEEEEEEEECCTTS
T ss_pred ----cCCC----CCCCHHHHHHHHHHHHHHc-CCEEEeCCEEEEEEEC-CC-EEEEEECCCCEEEeCEEEECCCCC
Confidence 0000 0234556777788888776 67775 6899999865 33 566778888889999999999985
No 104
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.84 E-value=4.1e-10 Score=124.42 Aligned_cols=49 Identities=8% Similarity=0.039 Sum_probs=40.5
Q ss_pred ccCcccccCCCCCEEEecccCCCch---------H----HHHHHHHHHHHHHHHHHhcCCCC
Q 048823 397 QCYRSLMTKKVEGLFFSGQINGTTG---------Y----EEAAAQGIISGINAARHSDGKSL 445 (699)
Q Consensus 397 ~l~~~letk~i~gLf~AGqi~G~~G---------y----~eA~a~G~~Ag~naa~~~~~~~~ 445 (699)
..+++|++++.||+|.+||+....+ + .-|..||.+||.|.++.+.|+++
T Consensus 276 ~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~ 337 (430)
T 3hyw_A 276 IVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp CCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4678999778999999999986522 1 35778999999999999999865
No 105
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.83 E-value=1.2e-08 Score=116.13 Aligned_cols=145 Identities=15% Similarity=0.080 Sum_probs=83.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhh----------
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVA---------- 145 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~---------- 145 (699)
.++||+|||||++|+++|+.|++.|.+|+|||+.... +..++ +........+.++.+|-. ..+.
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~-~~~~~----~~~l~~~~~~~l~~lGl~-~~~~~~~~~~~~~~ 98 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT-ITHPR----VGTIGPRSMELFRRWGVA-KQIRTAGWPGDHPL 98 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC-CSSCC----CCEECHHHHHHHHHTTCH-HHHHTSSCCTTSBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC-CCCCc----eeeeCHHHHHHHHHcCCh-HHHHhhcCCccccc
Confidence 3589999999999999999999999999999996221 11111 111111222223333210 0000
Q ss_pred ------chhhhhHHhhccC------CCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEc
Q 048823 146 ------DMCYLQKRVLNTS------RGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTF 213 (699)
Q Consensus 146 ------d~~~i~~~~~~~s------~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~ 213 (699)
+..+.....+... ...........+++..+.+.|.+.+.+. ..++++|+++..+ ++.+. |++.
T Consensus 99 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~-~~~v~-v~~~ 173 (549)
T 2r0c_A 99 DAAWVTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQR-DDHVR-ATIT 173 (549)
T ss_dssp CEEEESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEEC-SSCEE-EEEE
T ss_pred ceEEeccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEe-CCEEE-EEEE
Confidence 0000000000000 0000001112467888888999888775 2347999999876 44544 5554
Q ss_pred C---c--cEEecCeEEEecCCCC
Q 048823 214 F---G--MNFYAPSVVLTTGTFM 231 (699)
Q Consensus 214 d---G--~~i~Ad~VVlAtG~~~ 231 (699)
+ | .+++||.||.|+|.++
T Consensus 174 ~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 174 DLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp ETTTCCEEEEEEEEEEECCCTTC
T ss_pred ECCCCCEEEEEeCEEEECCCCCc
Confidence 4 6 4799999999999985
No 106
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.81 E-value=9e-08 Score=95.30 Aligned_cols=44 Identities=16% Similarity=0.083 Sum_probs=35.6
Q ss_pred cccccCCCCCEEEecccCCCchHHHHHHHHHHHHHHHHHHhcCCC
Q 048823 400 RSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKS 444 (699)
Q Consensus 400 ~~letk~i~gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~~~~~ 444 (699)
+.+.+ ..++||+|||..+..|.+.|+.+|..||..++..++++.
T Consensus 288 ~~~~~-~~~~v~l~GDa~~g~gv~~A~~sG~~aA~~I~~~L~~e~ 331 (336)
T 3kkj_A 288 GALSD-ADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp SSEEE-TTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred cceee-CCCCEEEEecccCCcCHHHHHHHHHHHHHHHHHHhhccC
Confidence 34444 379999999987778899999999999999999887763
No 107
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.80 E-value=9.1e-09 Score=111.52 Aligned_cols=146 Identities=15% Similarity=0.030 Sum_probs=79.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCC-CCc-cchhhHHHHhhcCccc--hhhchh---hh-
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVG-GPA-KSQLVHEVDALGGEIG--KVADMC---YL- 150 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~G-g~~-~~~l~~el~~lg~~~~--~~~d~~---~i- 150 (699)
+|+|||||++|+++|+.|++.|++|+|+|+... ..... .| ++. .....+-++.+|.... .+.... ..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~-~~~~~----~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~ 77 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA-ASSIL----PGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQ 77 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS-SCSSC----CCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC-CCcCC----CceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcc
Confidence 599999999999999999999999999998521 11111 11 111 1122333333332100 000000 00
Q ss_pred ------hHHhhcc------CCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEE
Q 048823 151 ------QKRVLNT------SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNF 218 (699)
Q Consensus 151 ------~~~~~~~------s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i 218 (699)
..+.... ..+.........+++..+.+.|.+.+ +....++++|+++...+++ .+.|++.||+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~-~v~v~~~dG~~~ 153 (412)
T 4hb9_A 78 SRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENG-GIKIFFADGSHE 153 (412)
T ss_dssp CEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTS-CEEEEETTSCEE
T ss_pred eeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCC-eEEEEECCCCEE
Confidence 0000000 00000011112345555555554433 2222347889999765344 456889999999
Q ss_pred ecCeEEEecCCCCCC
Q 048823 219 YAPSVVLTTGTFMSG 233 (699)
Q Consensus 219 ~Ad~VVlAtG~~~~~ 233 (699)
+||.||.|+|.+|..
T Consensus 154 ~adlvVgADG~~S~v 168 (412)
T 4hb9_A 154 NVDVLVGADGSNSKV 168 (412)
T ss_dssp EESEEEECCCTTCHH
T ss_pred EeeEEEECCCCCcch
Confidence 999999999998643
No 108
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.77 E-value=4.5e-08 Score=108.42 Aligned_cols=152 Identities=11% Similarity=-0.018 Sum_probs=80.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceeEEeeecccccCCCCCCCCC---CCccc-h------hhHH--HHhhcCccc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGA--KTLLLTLNIDKIAWQPCNPAVG---GPAKS-Q------LVHE--VDALGGEIG 142 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~~~~~g~~~c~~s~G---g~~~~-~------l~~e--l~~lg~~~~ 142 (699)
.+||+|||||++|+++|..|++.|. +|+|+|+...-.|.+....... .+... . +... +..+...+.
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5899999999999999999999999 9999998522111111100000 00000 0 0000 000000000
Q ss_pred hhhchhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEE-EeeEEEEEEecCCCCEEEEEEcC---cc--
Q 048823 143 KVADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCI-REAMVTDILLGKNDNVEGVCTFF---GM-- 216 (699)
Q Consensus 143 ~~~d~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i-~~~~V~~l~~e~~g~v~gV~t~d---G~-- 216 (699)
..... ............+..........+..+.+.+.+.+.+. +..+ ++++|+++..+ +..+.|++.+ |.
T Consensus 86 ~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~--~~~~~V~~~~~~~G~~~ 161 (447)
T 2gv8_A 86 RDLQT-NTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPL-LPFIKLATDVLDIEKK--DGSWVVTYKGTKAGSPI 161 (447)
T ss_dssp TTCBC-SSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGG-GGGEECSEEEEEEEEE--TTEEEEEEEESSTTCCE
T ss_pred hhhcc-CCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeC--CCeEEEEEeecCCCCee
Confidence 00000 00000000000000000011235667788888888776 5555 47999999765 3345677665 66
Q ss_pred -EEecCeEEEecCCCCC
Q 048823 217 -NFYAPSVVLTTGTFMS 232 (699)
Q Consensus 217 -~i~Ad~VVlAtG~~~~ 232 (699)
++.+|.||+|||.++.
T Consensus 162 ~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 162 SKDIFDAVSICNGHYEV 178 (447)
T ss_dssp EEEEESEEEECCCSSSS
T ss_pred EEEEeCEEEECCCCCCC
Confidence 7999999999999754
No 109
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.76 E-value=1.3e-08 Score=109.13 Aligned_cols=137 Identities=15% Similarity=0.223 Sum_probs=79.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhh-hHHh
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGA-KTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYL-QKRV 154 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i-~~~~ 154 (699)
++||+|||||++|+++|+.|++.|. +|+|||++. .|. .|...... ..+.. .... ....++ .+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~--~Gg-~~~~~~~~---~~~~~-----~~~~---~~~~g~~~~~~ 69 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT--VGH-SFKHWPKS---TRTIT-----PSFT---SNGFGMPDMNA 69 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS--TTH-HHHTSCTT---CBCSS-----CCCC---CGGGTCCCTTC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC--CCC-ccccCccc---ccccC-----cchh---cccCCchhhhh
Confidence 5899999999999999999999999 999999852 110 00000000 00000 0000 000000 0000
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
......+.........++..+...+.+.+++. +++++ +++|+++..+ ++ .+.|.+.+| ++.+|.||+|||.+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~-~~-~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 70 ISMDTSPAFTFNEEHISGETYAEYLQVVANHY-ELNIFENTVVTNISAD-DA-YYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp SSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEC-SS-SEEEEESSC-CEEEEEEEECCCSTT
T ss_pred ccccccccccccccCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEC-CC-eEEEEeCCC-EEEeCEEEECCCCCC
Confidence 00000000000111245567777888877776 78887 5889999865 33 355777777 689999999999974
No 110
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.73 E-value=2.2e-08 Score=117.16 Aligned_cols=46 Identities=11% Similarity=0.008 Sum_probs=39.2
Q ss_pred CCCCEEEecccCCCchHHHHHHHHHHHHHHHHHHhcCCCCccCCcc
Q 048823 406 KVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGKSLIVLERE 451 (699)
Q Consensus 406 ~i~gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~~~~~~~~~~r~ 451 (699)
.+||+|++||+.+......|..||..||.|+...+.++++....++
T Consensus 640 ~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~g~~~~p~~~~ 685 (690)
T 3k30_A 640 EIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRRE 685 (690)
T ss_dssp SCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCCCTTSCSSCCC
T ss_pred CCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhccCCCCCCcChh
Confidence 4799999999999987888999999999999998888766555543
No 111
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.73 E-value=2.9e-09 Score=119.57 Aligned_cols=33 Identities=36% Similarity=0.688 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.+|||+|||||++|++||+.|++.|++|+|||+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk 37 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADY 37 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEe
Confidence 469999999999999999999999999999997
No 112
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.72 E-value=4.2e-09 Score=119.25 Aligned_cols=35 Identities=34% Similarity=0.667 Sum_probs=32.7
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+|||+|||||++|++||+.|++.|++|+|||++
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~ 64 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFV 64 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecc
Confidence 35699999999999999999999999999999984
No 113
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.71 E-value=1.6e-08 Score=108.49 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.++||+|||||++|+++|++|+++|++|+|||+.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~ 38 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARD 38 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEecc
Confidence 4689999999999999999999999999999985
No 114
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.69 E-value=6.6e-08 Score=107.81 Aligned_cols=147 Identities=15% Similarity=0.065 Sum_probs=81.6
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCc---eeEEeeecccccCCCCCCCCCCC-----ccchhhHHHHhhcCccchhhc
Q 048823 78 FDVIVVGGGHAGCEAALASAR---LGAK---TLLLTLNIDKIAWQPCNPAVGGP-----AKSQLVHEVDALGGEIGKVAD 146 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr---~G~k---V~LlE~~~~~~g~~~c~~s~Gg~-----~~~~l~~el~~lg~~~~~~~d 146 (699)
+||+|||||++|++||..|++ .|.+ |+|+|+...-.|.+......|.. ....+...+... .......
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~--~~~~~~~ 80 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSN--GPKECLE 80 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCS--SCGGGTC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhc--CChhhcc
Confidence 689999999999999999999 9999 99999852211111111111100 000000000000 0000000
Q ss_pred hhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeE--EE-eeEEEEEEecCCCCEEEEEEcC---c--cEE
Q 048823 147 MCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLC--IR-EAMVTDILLGKNDNVEGVCTFF---G--MNF 218 (699)
Q Consensus 147 ~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~--i~-~~~V~~l~~e~~g~v~gV~t~d---G--~~i 218 (699)
...+.+.. .. + .......++..+.+.+.+.+++. ++. +. +++|+.+..++++..+.|++.+ | .++
T Consensus 81 ~~~~~~~~--~~-~---~~~~~~~~~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~ 153 (464)
T 2xve_A 81 FADYTFDE--HF-G---KPIASYPPREVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSE 153 (464)
T ss_dssp BTTBCHHH--HH-S---SCCCSSCBHHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEE
T ss_pred cCCCCCCc--cc-C---CCCCCCCCHHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEE
Confidence 00000000 00 0 00011345677888888888877 665 54 7999999876333356677655 4 478
Q ss_pred ecCeEEEecCCCCCC
Q 048823 219 YAPSVVLTTGTFMSG 233 (699)
Q Consensus 219 ~Ad~VVlAtG~~~~~ 233 (699)
.+|.||+|||.++..
T Consensus 154 ~~d~VVvAtG~~s~p 168 (464)
T 2xve_A 154 EFDYVVCCTGHFSTP 168 (464)
T ss_dssp EESEEEECCCSSSSB
T ss_pred EcCEEEECCCCCCCC
Confidence 999999999976543
No 115
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.69 E-value=5.3e-09 Score=117.15 Aligned_cols=33 Identities=36% Similarity=0.586 Sum_probs=31.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.+|||+|||||++|++||+.|++.|++|+|||+
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk 40 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDF 40 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEe
Confidence 469999999999999999999999999999995
No 116
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.68 E-value=4e-08 Score=109.11 Aligned_cols=147 Identities=14% Similarity=0.048 Sum_probs=79.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-----CceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLG-----AKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYL 150 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G-----~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i 150 (699)
..|||+|||||++|+++|..|++.| .+|+|||+.. ..++.......+......+..++..+.. .....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~-~~g~~~~~~~~~~~~~~~~~~~l~~~~~------p~~~~ 101 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQG-DYRWHGNTLVSQSELQISFLKDLVSLRN------PTSPY 101 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCS-SCCSSGGGCCSSCBCSSCTTSSSSTTTC------TTCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCC-CCCCcCCCCCCCCcCCcchhhccccccC------CCCCC
Confidence 4689999999999999999999999 9999999962 2222110000000000000000000000 00000
Q ss_pred hHH-hhccCCCcc--ccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecC-CCCEE--EEEEcCcc----EEe
Q 048823 151 QKR-VLNTSRGPA--VWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGK-NDNVE--GVCTFFGM----NFY 219 (699)
Q Consensus 151 ~~~-~~~~s~g~~--~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~-~g~v~--gV~t~dG~----~i~ 219 (699)
.+. ++....... .........+..+...+...+.+. ++.+. +++|+++..++ +++.+ .|.+.+|. ++.
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~ 180 (463)
T 3s5w_A 102 SFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRT 180 (463)
T ss_dssp SHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEE
T ss_pred ChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEE
Confidence 000 000000000 000001124567777887777776 55554 68899987641 14443 56666765 899
Q ss_pred cCeEEEecCCC
Q 048823 220 APSVVLTTGTF 230 (699)
Q Consensus 220 Ad~VVlAtG~~ 230 (699)
+|.||+|||+.
T Consensus 181 ~d~lVlAtG~~ 191 (463)
T 3s5w_A 181 TRALVVSPGGT 191 (463)
T ss_dssp ESEEEECCCCE
T ss_pred eCEEEECCCCC
Confidence 99999999973
No 117
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.68 E-value=3.2e-07 Score=99.74 Aligned_cols=49 Identities=12% Similarity=0.100 Sum_probs=39.6
Q ss_pred cccccCCCCCEEEecccCCCch----HHHHHHHHHHHHHHHHHHhcCCCCccC
Q 048823 400 RSLMTKKVEGLFFSGQINGTTG----YEEAAAQGIISGINAARHSDGKSLIVL 448 (699)
Q Consensus 400 ~~letk~i~gLf~AGqi~G~~G----y~eA~a~G~~Ag~naa~~~~~~~~~~~ 448 (699)
.+|+.+..||+|.+||+++..+ -.-|..||.+|+.|.++.+.|++|...
T Consensus 279 ~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~~ 331 (401)
T 3vrd_B 279 RTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGTP 331 (401)
T ss_dssp TTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred CcceecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 3588778999999999876432 256788999999999999999987543
No 118
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.65 E-value=1.1e-08 Score=114.50 Aligned_cols=34 Identities=41% Similarity=0.730 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|+++|+.|++.|++|+|||++
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~ 43 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK 43 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 4699999999999999999999999999999984
No 119
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.63 E-value=1.5e-07 Score=104.89 Aligned_cols=34 Identities=32% Similarity=0.446 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.++||+|||||++|+++|+.|++.|++|+|||++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999999999999999999999999984
No 120
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.62 E-value=2.2e-08 Score=112.20 Aligned_cols=35 Identities=40% Similarity=0.667 Sum_probs=32.5
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+.+|||+|||||++|+++|+.|++.|++|+|||++
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 38 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERY 38 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34699999999999999999999999999999984
No 121
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.62 E-value=6.4e-08 Score=112.73 Aligned_cols=120 Identities=15% Similarity=0.214 Sum_probs=67.1
Q ss_pred cccEEEECCChHHHHHHHHHHH-----cCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhh--
Q 048823 77 RFDVIVVGGGHAGCEAALASAR-----LGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCY-- 149 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr-----~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~-- 149 (699)
++||+|||||++|+++|+.|++ .|++|+|||+..... . + ..+........+-++.+|-. ..+.....
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~-~--~--gra~~l~~~tle~l~~lGl~-~~l~~~~~~~ 81 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV-Y--N--GQADGLQCRTLESLKNLGLA-DKILSEANDM 81 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC-C--S--CSCCEECHHHHHHHHTTTCH-HHHHTTCBCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCC-C--C--CceeEEChHHHHHHHHCCCH-HHHHHhcccc
Confidence 5899999999999999999999 999999999852211 0 0 00101111223334444311 11000000
Q ss_pred hhHHhhccC-CC------------c-cccccccccCHHHHHHHHHHHHHccC--CeEEE-eeEEEEEEec
Q 048823 150 LQKRVLNTS-RG------------P-AVWALRAQTDKREYAMRMKNIVESTA--NLCIR-EAMVTDILLG 202 (699)
Q Consensus 150 i~~~~~~~s-~g------------~-~~~~~r~~~d~~~~~~~L~~~l~~~~--gv~i~-~~~V~~l~~e 202 (699)
....+.... .+ + ........+++..+.+.|.+.+.+.+ ++++. .++|+++..+
T Consensus 82 ~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d 151 (665)
T 1pn0_A 82 STIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEID 151 (665)
T ss_dssp CEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEEC
T ss_pred ceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEec
Confidence 000000000 00 0 00111124678889999999998874 47776 6999999876
No 122
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.61 E-value=1.8e-08 Score=113.12 Aligned_cols=31 Identities=26% Similarity=0.551 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHHHH-cCCceeEEe
Q 048823 77 RFDVIVVGGGHAGCEAALASAR-LGAKTLLLT 107 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr-~G~kV~LlE 107 (699)
+|||+|||||++|+++|+.|++ .|++|+|||
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 5999999999999999999999 999999999
No 123
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.61 E-value=5.4e-08 Score=111.24 Aligned_cols=70 Identities=29% Similarity=0.511 Sum_probs=48.8
Q ss_pred ccCCeEEE-eeEEEEEEecC-CCCEEEEEEc--Ccc--EEec-CeEEEecCCCCCCceeecccccCCCCcccccchhHHH
Q 048823 185 STANLCIR-EAMVTDILLGK-NDNVEGVCTF--FGM--NFYA-PSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLTE 257 (699)
Q Consensus 185 ~~~gv~i~-~~~V~~l~~e~-~g~v~gV~t~--dG~--~i~A-d~VVlAtG~~~~~~~~~g~~~~~~gr~g~~~s~~L~~ 257 (699)
+.+|++++ ++.|++|..++ +++++||.+. +|. +++| +-||+|+|++...+++. .+..+-++
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~------------~SGIGp~~ 284 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLM------------LSGIGPTR 284 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHH------------HTTEECHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHH------------HcCCCCHH
Confidence 34689998 79999999863 4689999875 354 5678 67999999985444432 11233345
Q ss_pred HHHHcCCcc
Q 048823 258 NLQRLGFET 266 (699)
Q Consensus 258 ~L~~~G~~~ 266 (699)
.|+++|+++
T Consensus 285 ~L~~~GI~v 293 (577)
T 3q9t_A 285 ELSRHGINT 293 (577)
T ss_dssp HHHTTTCCC
T ss_pred HHHHcCCCe
Confidence 678888865
No 124
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.61 E-value=8.1e-07 Score=100.46 Aligned_cols=97 Identities=23% Similarity=0.172 Sum_probs=73.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +...
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~----------~~~l---------------------------------- 250 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRT----------EPLK---------------------------------- 250 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------CTTT----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEec----------Cccc----------------------------------
Confidence 46999999999999999999999999999983 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCE--EEEEEcCcc-EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNV--EGVCTFFGM-NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v--~gV~t~dG~-~i~Ad~VVlAtG~~ 230 (699)
+ ..+ ..+...+.+.+++. |++++ ++.|+++..++++++ +.|++.+|+ ++.||.||+|+|..
T Consensus 251 ---~-------~~~-~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 251 ---L-------IKD-NETRAYVLDRMKEQ-GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp ---T-------CCS-HHHHHHHHHHHHHT-TCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred ---c-------ccc-HHHHHHHHHHHHhC-CcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 0 011 13455667777776 89998 689999986433444 557788887 89999999999976
No 125
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.61 E-value=2.1e-08 Score=107.06 Aligned_cols=92 Identities=11% Similarity=-0.012 Sum_probs=53.0
Q ss_pred CCCCCCCHHHHHHHH----hcccCCcCCccccccccccCCCcCccccC---c-ccccCCCCCEEEecccCCCchHHHHHH
Q 048823 356 GFSTGLPERLQLPLL----RTLPGLENCSMLRPAYAVEYDYLPAHQCY---R-SLMTKKVEGLFFSGQINGTTGYEEAAA 427 (699)
Q Consensus 356 G~~tslp~~~q~~~l----r~ipgLe~a~i~r~gy~~eyd~i~p~~l~---~-~letk~i~gLf~AGqi~G~~Gy~eA~a 427 (699)
++....+.+....++ +.+|+|.++++.+...+...- .|+ +. + --+....+|||+|....| .|++-|.+
T Consensus 246 ~~~~~~~~~~~~~l~~~~~~~~P~l~~~~i~~~w~G~r~~--t~D-~p~~~~~ig~~~~~~~~~~~~G~~g-~G~~~ap~ 321 (351)
T 3g3e_A 246 NWSELNNIQDHNTIWEGCCRLEPTLKNARIIGERTGFRPV--RPQ-IRLEREQLRTGPSNTEVIHNYGHGG-YGLTIHWG 321 (351)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHCGGGGGCEEEEEEEEEEEE--CSS-CEEEEEEECCSSSCEEEEEEECCTT-CHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCccCCcEeeeeEeeCCC--CCC-ccceeeeccCCCCCCeEEEEeCCCc-chHhhhHH
Confidence 444455555444443 578999888876543332111 111 10 0 011234689999988877 99999999
Q ss_pred HHHHHHHHHHHHhcCCCCccCCcc
Q 048823 428 QGIISGINAARHSDGKSLIVLERE 451 (699)
Q Consensus 428 ~G~~Ag~naa~~~~~~~~~~~~r~ 451 (699)
.|.+.+.-+...+.....+.++|.
T Consensus 322 ~g~~la~li~~~~~~~~~~~~~~~ 345 (351)
T 3g3e_A 322 CALEAAKLFGRILEEKKLSRMPPS 345 (351)
T ss_dssp HHHHHHHHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHHHHHHhcccccCCcc
Confidence 999888777766555444444443
No 126
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.61 E-value=3.7e-08 Score=109.44 Aligned_cols=33 Identities=33% Similarity=0.555 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|||+|||||++|+++|..|++.|++|+|+|++
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 589999999999999999999999999999984
No 127
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.59 E-value=2.3e-08 Score=106.49 Aligned_cols=141 Identities=16% Similarity=0.039 Sum_probs=74.8
Q ss_pred ccEEEECCChHHHHHHHHHHH---cCCceeEEeeecccccCCCCCC---------CCCCCc---cc----hhhHHHHhhc
Q 048823 78 FDVIVVGGGHAGCEAALASAR---LGAKTLLLTLNIDKIAWQPCNP---------AVGGPA---KS----QLVHEVDALG 138 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr---~G~kV~LlE~~~~~~g~~~c~~---------s~Gg~~---~~----~l~~el~~lg 138 (699)
+||+|||||++|+++|+.|++ .|++|+|+|++....|.+.... ..|... .. .+...++.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 689999999999999999999 9999999999632222111100 011110 00 1111111110
Q ss_pred --CccchhhchhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc
Q 048823 139 --GEIGKVADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG 215 (699)
Q Consensus 139 --~~~~~~~d~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG 215 (699)
+....+..... .. ....+...+.... ....+.+.+.+.+ +++++ +++|++|..+ +++ +.|.+.+|
T Consensus 82 ~~g~~~~~~~~~~-~~---~~~~~~~~~~~~~--g~~~l~~~l~~~~----g~~i~~~~~V~~i~~~-~~~-~~v~~~~g 149 (342)
T 3qj4_A 82 AYGVLRPLSSPIE-GM---VMKEGDCNFVAPQ--GISSIIKHYLKES----GAEVYFRHRVTQINLR-DDK-WEVSKQTG 149 (342)
T ss_dssp HTTSCEECCSCEE-TC---CC--CCEEEECTT--CTTHHHHHHHHHH----TCEEESSCCEEEEEEC-SSS-EEEEESSS
T ss_pred hCCCeecCchhhc-ce---eccCCccceecCC--CHHHHHHHHHHhc----CCEEEeCCEEEEEEEc-CCE-EEEEECCC
Confidence 01100000000 00 0000011111111 1123444444433 67776 7999999876 444 55888888
Q ss_pred cEEecCeEEEecCCC
Q 048823 216 MNFYAPSVVLTTGTF 230 (699)
Q Consensus 216 ~~i~Ad~VVlAtG~~ 230 (699)
..+.+|.||+|+...
T Consensus 150 ~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 150 SPEQFDLIVLTMPVP 164 (342)
T ss_dssp CCEEESEEEECSCHH
T ss_pred CEEEcCEEEECCCHH
Confidence 878999999999864
No 128
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.58 E-value=4e-07 Score=100.62 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHHcC--CceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLG--AKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G--~kV~LlE~~ 109 (699)
.|||||||+||++||..|++.| .+|+|+|++
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~ 34 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKD 34 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCC
Confidence 4999999999999999999998 579999984
No 129
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.56 E-value=2.4e-08 Score=112.36 Aligned_cols=33 Identities=30% Similarity=0.641 Sum_probs=31.2
Q ss_pred CCcccEEEECCChHHHHHHHHHHH-cCCceeEEe
Q 048823 75 DERFDVIVVGGGHAGCEAALASAR-LGAKTLLLT 107 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr-~G~kV~LlE 107 (699)
..+|||+|||||++|++||+.|++ .|++|+|||
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 346999999999999999999999 999999999
No 130
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.55 E-value=2.3e-08 Score=111.43 Aligned_cols=33 Identities=39% Similarity=0.697 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|||+|||||++|++||+.|++.|++|+|||++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 34 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKR 34 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 489999999999999999999999999999984
No 131
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.54 E-value=1.5e-08 Score=113.30 Aligned_cols=34 Identities=38% Similarity=0.634 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~ 37 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKR 37 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence 4589999999999999999999999999999984
No 132
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.54 E-value=4.8e-08 Score=108.88 Aligned_cols=34 Identities=32% Similarity=0.643 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
++|||+|||||++|+++|..|++.|++|+|+|++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 4699999999999999999999999999999984
No 133
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.54 E-value=2.1e-07 Score=106.35 Aligned_cols=69 Identities=30% Similarity=0.385 Sum_probs=50.0
Q ss_pred cCCeEEE-eeEEEEEEecC---CCCEEEEEEc--Ccc--EEecC-eEEEecCCCCCCceeecccccCCCCcccccchhHH
Q 048823 186 TANLCIR-EAMVTDILLGK---NDNVEGVCTF--FGM--NFYAP-SVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGLT 256 (699)
Q Consensus 186 ~~gv~i~-~~~V~~l~~e~---~g~v~gV~t~--dG~--~i~Ad-~VVlAtG~~~~~~~~~g~~~~~~gr~g~~~s~~L~ 256 (699)
.+|++++ ++.|++|+.+. +++++||++. +|. +++|+ -||+|+|++...+++. .+..+-.
T Consensus 239 r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~------------lSGIGp~ 306 (583)
T 3qvp_A 239 RPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILE------------YSGIGMK 306 (583)
T ss_dssp CTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHH------------HTTBSCH
T ss_pred CCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHH------------HcCCCCH
Confidence 4799998 79999999863 4689999875 464 67785 6999999996554442 1233444
Q ss_pred HHHHHcCCcc
Q 048823 257 ENLQRLGFET 266 (699)
Q Consensus 257 ~~L~~~G~~~ 266 (699)
+.|+++|+++
T Consensus 307 ~~L~~~GI~v 316 (583)
T 3qvp_A 307 SILEPLGIDT 316 (583)
T ss_dssp HHHGGGTCCC
T ss_pred HHHHhCCCCc
Confidence 5678888875
No 134
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.54 E-value=2.2e-08 Score=111.49 Aligned_cols=33 Identities=36% Similarity=0.659 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|||+|||||++|+++|+.|++.|++|+|+|++
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 489999999999999999999999999999984
No 135
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.53 E-value=3.3e-07 Score=100.37 Aligned_cols=54 Identities=13% Similarity=0.074 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 173 REYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 173 ~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
..+.+.|.+.+++. |++++ +++|++|..+ ++++ | +.+|.++.||.||+|+|.+.
T Consensus 189 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~-~~~v--V-~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMEN-KGKILTRKEVVEINIE-EKKV--Y-TRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTT-TCEEESSCCEEEEETT-TTEE--E-ETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHC-CCEEEcCCeEEEEEEE-CCEE--E-EeCCcEEEeCEEEECCCHHH
Confidence 45677788888886 78887 7999999875 5555 5 55677899999999999873
No 136
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.53 E-value=1.4e-07 Score=103.42 Aligned_cols=32 Identities=47% Similarity=0.677 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
|||||||||++|++||+.|++.|++|+|||+.
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~ 33 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGG 33 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecC
Confidence 79999999999999999999999999999984
No 137
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=2.3e-08 Score=111.44 Aligned_cols=34 Identities=38% Similarity=0.639 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|+++|+.|++.|++|+|+|++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~ 38 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKR 38 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3589999999999999999999999999999984
No 138
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.51 E-value=2.1e-08 Score=111.42 Aligned_cols=34 Identities=29% Similarity=0.550 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|+++|+.|++.|++|+|+|++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4699999999999999999999999999999984
No 139
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.50 E-value=3.1e-07 Score=102.26 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 173 REYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 173 ~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+.+.|.+.++.. |++++ +++|++|..++++++++|++.+|+++.||.||.|+|-+
T Consensus 256 ~~L~~aL~r~~~~~-Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAIN-GGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC---CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHc-CCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 35678888888887 67776 79999999833789999999999899999999999976
No 140
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.49 E-value=2.2e-07 Score=103.70 Aligned_cols=34 Identities=41% Similarity=0.558 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+|||+|||||++|+++|..|++.|++|+|||++
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 38 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKN 38 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3589999999999999999999999999999984
No 141
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.46 E-value=1.6e-06 Score=92.60 Aligned_cols=94 Identities=18% Similarity=0.173 Sum_probs=68.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+..|..|++.|.+|+++++.. ....
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~----------~~~~--------------------------------- 200 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH----------EFQG--------------------------------- 200 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS----------SCSS---------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC----------CCCC---------------------------------
Confidence 369999999999999999999999999999831 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc--Cc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF--FG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~--dG--~~i~Ad~VVlAtG~~ 230 (699)
.+ .+...+.+.+++. +++++ ++.|+++..+ ++++.+|.+. +| .++.+|.||+|+|..
T Consensus 201 --~~------------~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 201 --HG------------KTAHEVERARANG-TIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp --CS------------HHHHSSHHHHHHT-SEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred --CH------------HHHHHHHHHhhcC-ceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 00 1112233344443 89998 5899999865 5777777775 77 578999999999953
No 142
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.46 E-value=2.6e-07 Score=102.55 Aligned_cols=33 Identities=33% Similarity=0.602 Sum_probs=31.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|||+|||||++|+++|..|++.|++|+|+|++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 33 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKE 33 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCC
Confidence 389999999999999999999999999999984
No 143
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.46 E-value=5.2e-07 Score=101.41 Aligned_cols=33 Identities=30% Similarity=0.531 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHc---CCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARL---GAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~---G~kV~LlE~~ 109 (699)
+|||+|||||++|+++|+.|++. |++|+|||++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~ 37 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCD 37 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCC
Confidence 38999999999999999999999 9999999984
No 144
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.45 E-value=3.9e-06 Score=88.41 Aligned_cols=93 Identities=16% Similarity=0.226 Sum_probs=69.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..|++.|.+|+++++. +....
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~----------~~~~~--------------------------------- 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRR----------PQFRA--------------------------------- 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSS----------SSCCS---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcC----------CccCc---------------------------------
Confidence 46999999999999999999999999999983 00000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Cc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG--~~i~Ad~VVlAtG~~ 230 (699)
. ..+...+.+.+++. +++++ ++.|+++.. ++++.+|.+. +| .++.+|.||+|+|..
T Consensus 190 -------------~-~~~~~~l~~~l~~~-gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 190 -------------H-EASVKELMKAHEEG-RLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp -------------C-HHHHHHHHHHHHTT-SSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -------------c-HHHHHHHHhccccC-CeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 0 01223455556665 89998 589999875 3667777776 67 579999999999953
No 145
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.43 E-value=2.8e-07 Score=104.05 Aligned_cols=57 Identities=21% Similarity=0.286 Sum_probs=42.5
Q ss_pred HHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc---cEEecCeEEEecCCCCCCcee
Q 048823 179 MKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG---MNFYAPSVVLTTGTFMSGKIW 236 (699)
Q Consensus 179 L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG---~~i~Ad~VVlAtG~~~~~~~~ 236 (699)
+...+...+|++++ ++.|+.+..+ ++++.||...+. ..+.|+.||+|+|++...+++
T Consensus 216 ~~~~~~~r~nl~v~~~~~v~~i~~~-~~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LL 276 (526)
T 3t37_A 216 LTKAVRGRKNLTILTGSRVRRLKLE-GNQVRSLEVVGRQGSAEVFADQIVLCAGALESPALL 276 (526)
T ss_dssp SCHHHHTCTTEEEECSCEEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHH
T ss_pred ccccccCCCCeEEEeCCEEEEEEec-CCeEEEEEEEecCceEEEeecceEEcccccCCcchh
Confidence 33445556789998 6999999887 788899876533 267899999999998544444
No 146
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.41 E-value=1.6e-07 Score=104.40 Aligned_cols=33 Identities=30% Similarity=0.563 Sum_probs=31.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.+|||+|||||+||++||..|++.|++|+|+|+
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~ 36 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG 36 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc
Confidence 358999999999999999999999999999998
No 147
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.41 E-value=4e-08 Score=110.56 Aligned_cols=33 Identities=42% Similarity=0.642 Sum_probs=31.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|||+|||||++|++||..|++.|++|+|+|++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 34 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS 34 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 489999999999999999999999999999984
No 148
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.40 E-value=9.4e-08 Score=106.48 Aligned_cols=33 Identities=39% Similarity=0.689 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
++||+|||||+||++||..|++.|++|+|+|++
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~ 38 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAG 38 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 589999999999999999999999999999984
No 149
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.38 E-value=2.2e-07 Score=105.21 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=32.7
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+.++||+|||||++|+++|+.|++.|++|+|||++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~ 75 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRW 75 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 45699999999999999999999999999999984
No 150
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.36 E-value=5e-07 Score=100.15 Aligned_cols=108 Identities=14% Similarity=0.186 Sum_probs=65.2
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 78 FDVIVVGGGHAGCEAALASARL--GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.||+|||||+||++||..|++. |.+|+|+|++ ...+..+|.... .+.+.. .+
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~-~~~g~~~~~~~~-------------~~~~~~---~~--------- 56 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQ-ATVGYLSGGLSA-------------YFNHTI---NE--------- 56 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS-SCCSSCCC-------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC-CCCcccCccchh-------------hhcCCC---CC---------
Confidence 5899999999999999999998 8999999985 222222221000 000000 00
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEE-EcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVC-TFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~-t~dG~~i~Ad~VVlAtG~~ 230 (699)
...+.....+.+.+. +++++ +++|+.+..+ .+.+.+. ..++.++.+|.+|+|||+.
T Consensus 57 ----------------~~~~~~~~~~~~~~~-gi~~~~~~~V~~id~~--~~~v~v~~~~~~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 57 ----------------LHEARYITEEELRRQ-KIQLLLNREVVAMDVE--NQLIAWTRKEEQQWYSYDKLILATGAS 114 (452)
T ss_dssp --------------------CCCCHHHHHHT-TEEEECSCEEEEEETT--TTEEEEEETTEEEEEECSEEEECCCCC
T ss_pred ----------------HHHhhcCCHHHHHHC-CCEEEECCEEEEEECC--CCEEEEEecCceEEEEcCEEEECCCcc
Confidence 000000011223344 88886 7999999764 3444443 2355689999999999984
No 151
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.35 E-value=2.5e-07 Score=106.34 Aligned_cols=33 Identities=42% Similarity=0.713 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|||+|||||+||++||..|++.|++|+|+|+
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 469999999999999999999999999999997
No 152
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.33 E-value=9.2e-07 Score=97.68 Aligned_cols=33 Identities=24% Similarity=0.377 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcC------CceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLG------AKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G------~kV~LlE~~ 109 (699)
++||+|||||++|++||+.|++.| .+|+|+|+.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~ 43 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEAS 43 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECC
Confidence 489999999999999999999999 999999995
No 153
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.32 E-value=1e-06 Score=101.72 Aligned_cols=35 Identities=31% Similarity=0.623 Sum_probs=32.0
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
...|||+|||||++|+.+|+.|++.|++|+|||+.
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~ 78 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIG 78 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCCcEEEEecc
Confidence 35699999999999999999999999999999996
No 154
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.31 E-value=9.4e-07 Score=97.82 Aligned_cols=107 Identities=19% Similarity=0.235 Sum_probs=62.9
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 77 RFDVIVVGGGHAGCEAALASARL--GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
.+||+|||||++|+++|+.|++. |.+|+|+|+.. ..+..+|... . .+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~-~~~~~~~~~p----------~---~~~---------------- 52 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATE-WVSHAPCGIP----------Y---VVE---------------- 52 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSS-CCC----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCC-ccccCCcCCc----------c---ccC----------------
Confidence 47899999999999999999998 78999999841 1111111000 0 000
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc-cEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG-MNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG-~~i~Ad~VVlAtG~~ 230 (699)
+ ..+...+.....+.+.+..+++++ +++|+++..+ -..|.+.+| .++.+|.||+|||+.
T Consensus 53 -----~--------~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~----~~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 53 -----G--------LSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTG----YVRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp --------------------------CTHHHHTTCEEETTCEEEEECSS----EEEEECSSSEEEEECSEEEECCCEE
T ss_pred -----C--------CCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecC----CCEEEECCceEEEEcCEEEECCCCC
Confidence 0 000111111111223222488988 5799988532 244666777 389999999999964
No 155
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.30 E-value=1.1e-05 Score=90.01 Aligned_cols=93 Identities=17% Similarity=0.098 Sum_probs=68.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.++|||||..|++.|..+++.|.+|+++++. . ...
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~--------~l~----------------------------------- 223 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGLGYEPTVMVRS--I--------VLR----------------------------------- 223 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS--C--------SST-----------------------------------
T ss_pred cEEEECCCHHHHHHHHHHHHcCCEEEEEeCC--C--------CCc-----------------------------------
Confidence 5999999999999999999999999999872 0 000
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc-----EEecCeEEEecCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM-----NFYAPSVVLTTGT 229 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~-----~i~Ad~VVlAtG~ 229 (699)
..|. .+...+.+.+++. |++++ ++.|+++..+ ++....|++.++. ++.+|.||+|+|.
T Consensus 224 ----------~~d~-~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~ 287 (483)
T 3dgh_A 224 ----------GFDQ-QMAELVAASMEER-GIPFLRKTVPLSVEKQ-DDGKLLVKYKNVETGEESEDVYDTVLWAIGR 287 (483)
T ss_dssp ----------TSCH-HHHHHHHHHHHHT-TCCEEETEEEEEEEEC-TTSCEEEEEEETTTCCEEEEEESEEEECSCE
T ss_pred ----------ccCH-HHHHHHHHHHHhC-CCEEEeCCEEEEEEEc-CCCcEEEEEecCCCCceeEEEcCEEEECccc
Confidence 0111 3445566667775 89887 5899999865 2333456666553 7899999999995
No 156
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.30 E-value=1.8e-06 Score=97.09 Aligned_cols=60 Identities=17% Similarity=0.167 Sum_probs=43.2
Q ss_pred cCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCC------CEEEEEEcCc-----cEEecCeEEEecCC
Q 048823 170 TDKREYAMRMKNIVESTANLCIREAMVTDILLGKND------NVEGVCTFFG-----MNFYAPSVVLTTGT 229 (699)
Q Consensus 170 ~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g------~v~gV~t~dG-----~~i~Ad~VVlAtG~ 229 (699)
..+..|.++|+..+++.....-++++|+++...+.+ ..+.|++.++ .++.|+.||+|||.
T Consensus 142 p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 356788888888888773323357999999764222 3577877654 26899999999995
No 157
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=98.29 E-value=7.2e-07 Score=101.71 Aligned_cols=70 Identities=24% Similarity=0.271 Sum_probs=49.4
Q ss_pred ccCCeEEE-eeEEEEEEec---CC-CCEEEEEEcC--c-c--EEec-CeEEEecCCCCCCceeecccccCCCCcccccch
Q 048823 185 STANLCIR-EAMVTDILLG---KN-DNVEGVCTFF--G-M--NFYA-PSVVLTTGTFMSGKIWVGRTSMPAGRAGESASH 253 (699)
Q Consensus 185 ~~~gv~i~-~~~V~~l~~e---~~-g~v~gV~t~d--G-~--~i~A-d~VVlAtG~~~~~~~~~g~~~~~~gr~g~~~s~ 253 (699)
+.+|++++ ++.|++|+.+ ++ ++++||.+.+ | . +++| +-||+|+|++...+++. .+..
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~------------lSGI 286 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQ------------LSGI 286 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHH------------HTTE
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHH------------hcCC
Confidence 45799998 7999999986 12 5789998753 4 3 6778 78999999985444442 1223
Q ss_pred hHHHHHHHcCCcc
Q 048823 254 GLTENLQRLGFET 266 (699)
Q Consensus 254 ~L~~~L~~~G~~~ 266 (699)
+-++.|+++|+++
T Consensus 287 Gp~~~L~~~gI~v 299 (566)
T 3fim_B 287 GDENDLSSVGIDT 299 (566)
T ss_dssp ECHHHHHHTTCCC
T ss_pred CChHHHhhcCCCc
Confidence 4456678888875
No 158
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.28 E-value=6.6e-07 Score=98.67 Aligned_cols=107 Identities=23% Similarity=0.188 Sum_probs=66.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGA--KTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
.+||+|||||++|+++|..|++.|. +|+|+|+.. |.+... . .+.+. +
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~-------~~~~~~-~---~l~~~------~-------------- 52 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDAT-------VIPHHL-P---PLSKA------Y-------------- 52 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCC-------SCCBCS-G---GGGTT------T--------------
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCC-------CCCCcC-C---CCcHH------H--------------
Confidence 4899999999999999999999998 799999841 100000 0 00000 0
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+.....+. .. ... +.+.+.+. +++++ ++.|+.+..+ ++ .|.+.+|.++.+|.||+|||+.
T Consensus 53 ~~~~~~~~--~~--~~~-------~~~~~~~~-gv~~~~~~~v~~i~~~--~~--~v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 53 LAGKATAE--SL--YLR-------TPDAYAAQ-NIQLLGGTQVTAINRD--RQ--QVILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp TTTCSCSG--GG--BSS-------CHHHHHHT-TEEEECSCCEEEEETT--TT--EEEETTSCEEECSEEEECCCEE
T ss_pred hCCCCChH--Hh--ccc-------CHHHHHhC-CCEEEeCCEEEEEECC--CC--EEEECCCCEEECCEEEEcCCCC
Confidence 00000000 00 000 11223343 89987 5789988754 33 4677888889999999999975
No 159
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.27 E-value=1.2e-06 Score=97.71 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=30.5
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
.||+|||||++|+++|..|++. |.+|+|+|++
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~ 37 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA 37 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 6899999999999999999999 9999999995
No 160
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.26 E-value=9e-08 Score=103.61 Aligned_cols=134 Identities=16% Similarity=0.039 Sum_probs=74.7
Q ss_pred cEEEECCChHHHHHHHHHHHc--CCceeEEeeecccccCCCCCCCCCCCccch-----hh-HH-HHhhcCcc--chhhch
Q 048823 79 DVIVVGGGHAGCEAALASARL--GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQ-----LV-HE-VDALGGEI--GKVADM 147 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~-----l~-~e-l~~lg~~~--~~~~d~ 147 (699)
||+|||||++|+++|+.|++. |++|+|+|+... ....++.....+..... +. .. +....... ..+.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE-QEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT-TCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC-CCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 799999999999999999999 999999998522 11111110000000000 00 00 00000000 00000
Q ss_pred hhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEe
Q 048823 148 CYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLT 226 (699)
Q Consensus 148 ~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlA 226 (699)
.+. .+....+. +...+++..+.+.|.+.+.+. |++++ +++|+++... .++.||.||+|
T Consensus 80 ~g~---~~~~~~~~----~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~-------------~~~~ad~vV~A 138 (381)
T 3c4a_A 80 HNE---PSLMSTGV----LLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGEL-------------PLADYDLVVLA 138 (381)
T ss_dssp SSS---EEECCCCS----CEEEEEHHHHHHHHHHHHHHT-TCEEETTCCCCSGGGC-------------CGGGCSEEEEC
T ss_pred CCe---eEEecCCC----ceeeecHHHHHHHHHHHHHHC-CCEEEeCCEeccchhc-------------ccccCCEEEEC
Confidence 000 00000011 111467888999999999887 88887 6888776421 12579999999
Q ss_pred cCCCCCCcee
Q 048823 227 TGTFMSGKIW 236 (699)
Q Consensus 227 tG~~~~~~~~ 236 (699)
+|.++. +-.
T Consensus 139 dG~~S~-R~~ 147 (381)
T 3c4a_A 139 NGVNHK-TAH 147 (381)
T ss_dssp CGGGGG-TCC
T ss_pred CCCCch-HHh
Confidence 999875 543
No 161
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.26 E-value=1.5e-06 Score=96.44 Aligned_cols=55 Identities=11% Similarity=0.040 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 174 EYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 174 ~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.+.+.|.+.+.+. |++++ ++.|++|..+ +++++.|.+. |.++.||.||+|++.+.
T Consensus 235 ~l~~~l~~~l~~~-g~~i~~~~~V~~i~~~-~~~~~~v~~~-~~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 235 MLPQALETHLTSR-GVSVLRGQPVCGLSLQ-AEGRWKVSLR-DSSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCCCEEEEC-GGGCEEEECS-SCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHhc-CCEEEeCCEEEEEEEc-CCceEEEEEC-CeEEEcCEEEECCCHHH
Confidence 3667777777776 78886 7999999875 4455677764 44799999999999864
No 162
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.25 E-value=8.7e-07 Score=98.03 Aligned_cols=32 Identities=31% Similarity=0.397 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
+||+|||||++|++||..|++. |.+|+|||++
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~ 34 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKG 34 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECC
Confidence 3899999999999999999998 9999999984
No 163
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=9e-07 Score=95.50 Aligned_cols=32 Identities=22% Similarity=0.309 Sum_probs=29.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.-||+|||||+||++||..|++.| +|+|+|++
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~ 39 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKE 39 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECC
Confidence 368999999999999999999999 99999984
No 164
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.23 E-value=1.1e-06 Score=98.21 Aligned_cols=33 Identities=27% Similarity=0.469 Sum_probs=30.3
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
.+||+|||||++|+++|..|++. |.+|+|||+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~ 70 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKG 70 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC
Confidence 36999999999999999999997 8999999984
No 165
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.22 E-value=1.1e-06 Score=97.31 Aligned_cols=32 Identities=34% Similarity=0.352 Sum_probs=30.4
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
+||+|||||++|+++|..|++. |.+|+|+|++
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~ 34 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMN 34 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC
Confidence 5899999999999999999998 9999999984
No 166
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.21 E-value=9.2e-07 Score=96.81 Aligned_cols=108 Identities=22% Similarity=0.222 Sum_probs=66.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCc--eeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAK--TLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKR 153 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~k--V~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~ 153 (699)
..+||+|||||++|+++|..|++.|.+ |+|+|+... .+... ..+...
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~----------~~y~~-~~l~~~-------------------- 56 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPE----------IPYER-PPLSKE-------------------- 56 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSS----------CCBCS-GGGGTT--------------------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCC----------CCcCc-ccCCHH--------------------
Confidence 458999999999999999999999987 999998411 10000 000000
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEe-eEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIRE-AMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~-~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
++.....+.. . ... ..+.+.+ .+++++. ++|+.+..+ ++ .|.+.+|..+.+|.+|+|||+.
T Consensus 57 ~~~~~~~~~~--~--~~~-------~~~~~~~-~~i~~~~~~~v~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 57 YLAREKTFER--I--CIR-------PAQFWED-KAVEMKLGAEVVSLDPA--AH--TVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp TTTTSSCSGG--G--BSS-------CHHHHHH-TTEEEEETCCEEEEETT--TT--EEEETTSCEEEEEEEEECCCEE
T ss_pred HHcCCCCHHH--h--ccC-------CHHHHHH-CCcEEEeCCEEEEEECC--CC--EEEECCCCEEEeeEEEEccCCc
Confidence 0000000000 0 000 1122333 3899875 699998753 33 4677888899999999999964
No 167
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.21 E-value=1.7e-06 Score=93.90 Aligned_cols=106 Identities=14% Similarity=0.182 Sum_probs=67.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
...|+|||||+||++||..|++.+.+|+|+|+.. ..+ .....+... +.+..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~----------~~~-y~~~~l~~~---l~g~~--------------- 59 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEK----------YLP-YYRPRLNEI---IAKNK--------------- 59 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSS----------SCC-BCGGGHHHH---HHSCC---------------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCC----------CCC-cccChhhHH---HcCCC---------------
Confidence 3569999999999999999988899999999841 111 000011111 11000
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+. .+.....+.+++. +++++ +++|+.+..+ ++ .|++.+|+++.+|.+|+|||+.
T Consensus 60 ---~~~-----------~l~~~~~~~~~~~-~i~~~~~~~V~~id~~--~~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 60 ---SID-----------DILIKKNDWYEKN-NIKVITSEFATSIDPN--NK--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp ---CGG-----------GTBSSCHHHHHHT-TCEEECSCCEEEEETT--TT--EEEETTSCEEECSEEEECCCEE
T ss_pred ---CHH-----------HccCCCHHHHHHC-CCEEEeCCEEEEEECC--CC--EEEECCCCEEECCEEEEecCCC
Confidence 000 0000011223343 89987 6899999864 33 4778899999999999999974
No 168
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.21 E-value=3.4e-06 Score=95.81 Aligned_cols=53 Identities=21% Similarity=0.296 Sum_probs=41.2
Q ss_pred HHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---cc--EE---ecCeEEEecCCCCC
Q 048823 179 MKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF---GM--NF---YAPSVVLTTGTFMS 232 (699)
Q Consensus 179 L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G~--~i---~Ad~VVlAtG~~~~ 232 (699)
+.+.+.+.+|++++ ++.|++|..+ ++++.||++.+ |+ ++ .+|.||+|+|++..
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~s 262 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGT 262 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcC
Confidence 44445555799998 6999999987 67899999865 64 34 78999999999843
No 169
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.20 E-value=8.8e-07 Score=97.60 Aligned_cols=138 Identities=16% Similarity=0.028 Sum_probs=72.3
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecc-cccCCCCCCCCCCCccchhhHHHHhhcCc-cch-hhchhhhhHH
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNID-KIAWQPCNPAVGGPAKSQLVHEVDALGGE-IGK-VADMCYLQKR 153 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~-~~g~~~c~~s~Gg~~~~~l~~el~~lg~~-~~~-~~d~~~i~~~ 153 (699)
.+||+|||||++|+++|+.|++.|++|+|||+... ......|.. +.............+|.. +.. .....++...
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~--~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 99 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLN--TVAHNAVTVQREVALDVNEWPSEEFGYFGHYYY 99 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCC--CCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhccccccc--chhccchhhhhhhhcChhhhhhhcccccceeEE
Confidence 37999999999999999999999999999998631 111111111 111112222222333211 110 0000000000
Q ss_pred hhccCC---CccccccccccCHHHHHHHHHHHHHccCCeEEEeeEE--EEEEecCCCCEEEEEEcCccEEecCeEEEecC
Q 048823 154 VLNTSR---GPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMV--TDILLGKNDNVEGVCTFFGMNFYAPSVVLTTG 228 (699)
Q Consensus 154 ~~~~s~---g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V--~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG 228 (699)
...... ......+...+++..+...|.+.+.+. |+++....+ .++. .....+|.||+|+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~-Gv~v~~~~v~~~~l~--------------~~~~~ad~VV~AdG 164 (430)
T 3ihm_A 100 VGGPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEAR-GGKFCYDAVSAEDLE--------------GLSEQYDLLVVCTG 164 (430)
T ss_dssp ECSSSCEEEEEEEEEEEBEECHHHHHHHHHHHHHHT-TCEEEECCCCGGGHH--------------HHHTTSSEEEECCC
T ss_pred ECCCCccccchhcCCcceeecHHHHHHHHHHHHHHc-CCEEEEEecchhhhh--------------hhcccCCEEEECCC
Confidence 000000 000011223568888999999999886 777654222 1111 00125899999999
Q ss_pred CCC
Q 048823 229 TFM 231 (699)
Q Consensus 229 ~~~ 231 (699)
..+
T Consensus 165 ~~S 167 (430)
T 3ihm_A 165 KYA 167 (430)
T ss_dssp CTT
T ss_pred Ccc
Confidence 875
No 170
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.20 E-value=6.3e-07 Score=100.48 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=31.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcC---CceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLG---AKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G---~kV~LlE~~ 109 (699)
++||+|||||++|+++|..|++.| .+|+|||++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~ 70 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQN 70 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECC
Confidence 489999999999999999999998 999999984
No 171
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.16 E-value=2.6e-06 Score=95.66 Aligned_cols=109 Identities=24% Similarity=0.237 Sum_probs=69.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.++||+|||||++|+++|+.|++. ++|+|+|++ +..||..... . ....
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~----------~~~GG~~~~~--------~------~~~~------- 154 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEER----------GWLGGDMWLK--------G------IKQE------- 154 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTT----------SSSSCSGGGT--------C------SEET-------
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCC----------CCCCCeeecc--------c------cccC-------
Confidence 358999999999999999999999 999999984 2233321100 0 0000
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc--EEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~--~i~Ad~VVlAtG~~ 230 (699)
+. . . +...+...+.+.+ . .+++++ ++.|.++..+ +..+..+...+++ .+.+|.+|+|||+.
T Consensus 155 ----g~----~--~-~~~~~~~~l~~~l-~-~~v~~~~~~~v~~i~~~-~~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 155 ----GF----N--K-DSRKVVEELVGKL-N-ENTKIYLETSALGVFDK-GEYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp ----TT----T--E-EHHHHHHHHHHTC-C-TTEEEETTEEECCCEEC-SSSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred ----CC----C--C-CHHHHHHHHHHHH-h-cCCEEEcCCEEEEEEcC-CcEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 00 0 0 2233444444444 3 488886 6889888765 3333333334554 68999999999975
No 172
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.16 E-value=8.5e-06 Score=89.07 Aligned_cols=97 Identities=24% Similarity=0.280 Sum_probs=76.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..+++.|.+|+++++. +.. +..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~----------~~~------------------l~~-------------- 190 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEAL----------PRV------------------LAR-------------- 190 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SST------------------TTT--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecC----------Cch------------------hhh--------------
Confidence 46999999999999999999999999999983 000 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++..+ ++++.+|.+.+|+++.||.||+|+|..
T Consensus 191 -----------~~~-~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 191 -----------VAG-EALSEFYQAEHRAH-GVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp -----------TSC-HHHHHHHHHHHHHT-TCEEEETCCEEEEEES-SSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred -----------hcC-HHHHHHHHHHHHhC-CCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 011 24555666777776 89987 6899999865 678889999999999999999999975
No 173
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.16 E-value=4e-06 Score=101.59 Aligned_cols=110 Identities=26% Similarity=0.304 Sum_probs=70.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.++||+|||||+||++||..|++.|++|+|||++ +..||... .. ... ..+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~----------~~~GG~~~-~~-------~k~---~i~--------- 176 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDER----------AEAGGTLL-DT-------AGE---QID--------- 176 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS----------SSSSGGGG-GS-------SCC---EET---------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC----------CCCCceec-cC-------Ccc---ccC---------
Confidence 3589999999999999999999999999999984 22222110 00 000 000
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE---------------cCccEEe
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT---------------FFGMNFY 219 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t---------------~dG~~i~ 219 (699)
+ .....+...+.+.+.+.++++++ ++.|.++.. .+.+..+.. .++.++.
T Consensus 177 ----~---------~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~--~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~ 241 (965)
T 2gag_A 177 ----G---------MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYD--ANYLIAAQRRTVHLDGPSGPGVSRERIWHIR 241 (965)
T ss_dssp ----T---------EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEET--TTEEEEEEECSTTCSSCCCTTCCSEEEEEEE
T ss_pred ----C---------CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeec--CCceeeeEeecccccccccccCCCCceEEEE
Confidence 0 01223445555666665689987 588888863 233333321 1223789
Q ss_pred cCeEEEecCCC
Q 048823 220 APSVVLTTGTF 230 (699)
Q Consensus 220 Ad~VVlAtG~~ 230 (699)
+|.||+|||+.
T Consensus 242 ~d~lVlATGs~ 252 (965)
T 2gag_A 242 AKQVVLATGAH 252 (965)
T ss_dssp EEEEEECCCEE
T ss_pred CCEEEECCCCc
Confidence 99999999985
No 174
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.14 E-value=9.1e-06 Score=88.56 Aligned_cols=97 Identities=23% Similarity=0.307 Sum_probs=76.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..+++.|.+|+++++. +.. +..
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~----------~~~------------------~~~-------------- 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELA----------PRV------------------MAR-------------- 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SST------------------TTT--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC----------Ccc------------------hhh--------------
Confidence 46999999999999999999999999999973 000 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++..+ ++++.+|.+.+|+++.||.||+|+|..
T Consensus 181 -----------~~~-~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 181 -----------VVT-PEISSYFHDRHSGA-GIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp -----------TSC-HHHHHHHHHHHHHT-TCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred -----------ccC-HHHHHHHHHHHHhC-CcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 011 23556667777775 89997 6899999865 578889999999999999999999975
No 175
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.14 E-value=2e-06 Score=93.90 Aligned_cols=106 Identities=16% Similarity=0.167 Sum_probs=66.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.||+|||||++|+++|..|++.|. +|+|+|+... ..... ..+.. .++
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~----------~~y~~-~~l~~--------------------~~l 50 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKH----------LPYQR-PPLSK--------------------AYL 50 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSS----------SSBCS-GGGGT--------------------GGG
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCC----------CCCCC-ccCCH--------------------HHH
Confidence 479999999999999999999998 8999998411 00000 00000 000
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.....+... ... ..+.+.+ .+++++.++|+.+..+ ++ .|.+.+|.++.+|.+|+|||+.
T Consensus 51 ~~~~~~~~~----~~~-------~~~~~~~-~~i~~~~~~v~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 51 KSGGDPNSL----MFR-------PEKFFQD-QAIELISDRMVSIDRE--GR--KLLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp GSCCCTTSS----BSS-------CHHHHHH-TTEEEECCCEEEEETT--TT--EEEESSSCEEECSEEEECCCEE
T ss_pred CCCCCHHHc----cCC-------CHHHHHh-CCCEEEEEEEEEEECC--CC--EEEECCCCEEECCEEEEeeCCC
Confidence 000000000 000 1122333 3888877889998754 33 4778889899999999999973
No 176
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.13 E-value=3.6e-06 Score=96.47 Aligned_cols=110 Identities=21% Similarity=0.248 Sum_probs=66.3
Q ss_pred cccEEEECCChHHHHHHHHHHHc--CCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 77 RFDVIVVGGGHAGCEAALASARL--GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
..||+|||||+||++||+.|++. |.+|+|+|++. ..+...| .+.. .+++...
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~-~~~~~~~----------~lp~---~~~g~~~------------ 89 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGE-YISFANC----------GLPY---YIGGVIT------------ 89 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSS-CSSBCGG----------GHHH---HHTTSSC------------
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCC-CccccCC----------CCch---hhcCcCC------------
Confidence 47899999999999999999998 89999999841 1111000 0000 0111000
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE-cCcc--EEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT-FFGM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t-~dG~--~i~Ad~VVlAtG~~ 230 (699)
... ..+...+...+++. ++.+. +++|+++..+ ++.+.+.. .+|. .+.+|.||+|||+.
T Consensus 90 -----~~~----------~~~~~~~~~~~~~~-gi~v~~~~~V~~id~~--~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 90 -----ERQ----------KLLVQTVERMSKRF-NLDIRVLSEVVKINKE--EKTITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp -----CGG----------GGBSSCHHHHHHHT-TCEEECSEEEEEEETT--TTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -----ChH----------HhhccCHHHHHHhc-CcEEEECCEEEEEECC--CCEEEEeecCCCCEEEEeCCEEEECCCCC
Confidence 000 00111122233343 88886 7999999864 34443443 4565 78999999999973
No 177
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.10 E-value=3.4e-06 Score=93.72 Aligned_cols=33 Identities=30% Similarity=0.382 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--CceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLG--AKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G--~kV~LlE~~ 109 (699)
.+||+|||||++|+++|+.|++.| .+|+|+|+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~ 38 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAG 38 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECC
Confidence 479999999999999999999999 999999985
No 178
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.06 E-value=1.9e-05 Score=85.42 Aligned_cols=96 Identities=16% Similarity=0.062 Sum_probs=73.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-+++|||||..|+++|..+++.|.+|+|+|+. +... .
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~~------------------~--------------- 182 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPC----------EQVM------------------P--------------- 182 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSSS------------------T---------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecC----------cchh------------------h---------------
Confidence 46999999999999999999999999999983 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
......+...+.+.+++. |++++ ++.|+++..+ +..+.|.+.+|+++.||.||+|+|..
T Consensus 183 -----------~~~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~--~~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 183 -----------GLLHPAAAKAVQAGLEGL-GVRFHLGPVLASLKKA--GEGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp -----------TTSCHHHHHHHHHHHHTT-TCEEEESCCEEEEEEE--TTEEEEEETTSCEEEESEEEECSCEE
T ss_pred -----------cccCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEec--CCEEEEEECCCCEEECCEEEECcCCC
Confidence 001124556667777775 89987 5889999764 33467888899899999999999975
No 179
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.04 E-value=4.1e-06 Score=90.66 Aligned_cols=33 Identities=27% Similarity=0.467 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--CceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLG--AKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G--~kV~LlE~~ 109 (699)
++||+|||||++|++||..|++.| .+|+|+|++
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~ 38 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITAD 38 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSS
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECC
Confidence 589999999999999999999999 568999974
No 180
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.04 E-value=6.5e-05 Score=84.40 Aligned_cols=94 Identities=19% Similarity=0.214 Sum_probs=66.7
Q ss_pred cEEEECCChHHHHHHHHHHHcC--------------CceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchh
Q 048823 79 DVIVVGGGHAGCEAALASARLG--------------AKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKV 144 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G--------------~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~ 144 (699)
.++|||||+.|++.|..++..+ .+|+|+|.. +.+-
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~----------~~il--------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEAL----------PIVL--------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSS----------SSSS---------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccc----------cccc---------------------
Confidence 4999999999999999988653 578999873 0000
Q ss_pred hchhhhhHHhhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc----EEe
Q 048823 145 ADMCYLQKRVLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM----NFY 219 (699)
Q Consensus 145 ~d~~~i~~~~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~----~i~ 219 (699)
+ .++ ..+...+.+.+++. ||+++ ++.|+++.. ++.+..+...||. ++.
T Consensus 268 ----------------~-------~~~-~~~~~~~~~~L~~~-GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ 320 (502)
T 4g6h_A 268 ----------------N-------MFE-KKLSSYAQSHLENT-SIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIP 320 (502)
T ss_dssp ----------------T-------TSC-HHHHHHHHHHHHHT-TCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEE
T ss_pred ----------------c-------CCC-HHHHHHHHHHHHhc-ceeeecCceEEEEeC--CceEEEEEecCcccceeeec
Confidence 0 112 24566677778886 99998 799998852 3334445556663 699
Q ss_pred cCeEEEecCCC
Q 048823 220 APSVVLTTGTF 230 (699)
Q Consensus 220 Ad~VVlAtG~~ 230 (699)
||.||.|+|..
T Consensus 321 ad~viwa~Gv~ 331 (502)
T 4g6h_A 321 YGTLIWATGNK 331 (502)
T ss_dssp CSEEEECCCEE
T ss_pred cCEEEEccCCc
Confidence 99999999964
No 181
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.03 E-value=2e-05 Score=86.79 Aligned_cols=97 Identities=21% Similarity=0.259 Sum_probs=74.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+++++. +.. +..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~----------~~~------------------l~~-------------- 187 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTA----------ARV------------------LER-------------- 187 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SST------------------TTT--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeC----------Ccc------------------ccc--------------
Confidence 46999999999999999999999999999973 000 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEe--cCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILL--GKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~--e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++.. + ++++.+|.+.+|+++.||.||+|+|..
T Consensus 188 -----------~~~~-~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~-~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 188 -----------VTAP-PVSAFYEHLHREA-GVDIRTGTQVCGFEMSTD-QQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp -----------TSCH-HHHHHHHHHHHHH-TCEEECSCCEEEEEECTT-TCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred -----------hhhH-HHHHHHHHHHHhC-CeEEEeCCEEEEEEeccC-CCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 0111 3445566667776 89987 689999975 3 577888999999999999999999965
No 182
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.02 E-value=7.8e-06 Score=93.71 Aligned_cols=70 Identities=26% Similarity=0.311 Sum_probs=49.0
Q ss_pred ccCCeEEE-eeEEEEEEecCC---CCEEEEEEc--Ccc--EEec-CeEEEecCCCCCCceeecccccCCCCcccccchhH
Q 048823 185 STANLCIR-EAMVTDILLGKN---DNVEGVCTF--FGM--NFYA-PSVVLTTGTFMSGKIWVGRTSMPAGRAGESASHGL 255 (699)
Q Consensus 185 ~~~gv~i~-~~~V~~l~~e~~---g~v~gV~t~--dG~--~i~A-d~VVlAtG~~~~~~~~~g~~~~~~gr~g~~~s~~L 255 (699)
+.+|++++ ++.|++|+.+++ ++++||... +|. ++.| +.||+|+|++...+++.- .| .+-
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~--------SG----IGp 309 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEY--------SG----IGL 309 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHH--------TT----EEC
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHh--------CC----CCC
Confidence 34699998 699999987632 479999874 564 6788 899999999965555421 12 233
Q ss_pred HHHHHHcCCcc
Q 048823 256 TENLQRLGFET 266 (699)
Q Consensus 256 ~~~L~~~G~~~ 266 (699)
+..|+++|+++
T Consensus 310 ~~~L~~~gI~v 320 (587)
T 1gpe_A 310 KSVLDQANVTQ 320 (587)
T ss_dssp HHHHHHTTCCC
T ss_pred HHHHHhCCCCe
Confidence 34567888865
No 183
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.01 E-value=6.5e-06 Score=93.66 Aligned_cols=32 Identities=25% Similarity=0.480 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
.||+|||||+||++||..|++. |.+|+|+|+.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~ 35 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERG 35 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECC
Confidence 4799999999999999999998 8899999984
No 184
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.01 E-value=3e-06 Score=96.38 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=38.1
Q ss_pred ccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---cc--EEecC-eEEEecCCCCC
Q 048823 185 STANLCIR-EAMVTDILLGKNDNVEGVCTFF---GM--NFYAP-SVVLTTGTFMS 232 (699)
Q Consensus 185 ~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G~--~i~Ad-~VVlAtG~~~~ 232 (699)
+.+|++++ ++.|++|..+++++++||.+.+ |. ++.|+ .||+|+|++..
T Consensus 220 ~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~s 274 (546)
T 2jbv_A 220 EQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDT 274 (546)
T ss_dssp TCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHH
T ss_pred cCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCccCC
Confidence 34689998 6999999987227899998754 53 78898 99999999743
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.00 E-value=6.1e-06 Score=90.20 Aligned_cols=105 Identities=19% Similarity=0.190 Sum_probs=65.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCc--eeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAK--TLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~k--V~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
.||+|||||+||+++|..|++.|.+ |+|+|+... .+.. ...+...+ +
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~----------~~y~-~~~l~~~~--------------------~ 51 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPH----------LPYD-RPSLSKAV--------------------L 51 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSS----------SSBC-SGGGGTHH--------------------H
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCC----------CCcC-CccccHHH--------------------h
Confidence 4799999999999999999999987 999998411 1100 00010000 0
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEe-eEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIRE-AMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~-~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.....+... . . . .+.+.+. +++++. ++|+.+..+ .+ .|.+.+|.++.+|.+|+|||+.
T Consensus 52 ~g~~~~~~~-~--~-~--------~~~~~~~-~i~~~~~~~v~~id~~--~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 52 DGSLERPPI-L--A-E--------ADWYGEA-RIDMLTGPEVTALDVQ--TR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HTSSSSCCB-S--S-C--------TTHHHHT-TCEEEESCCEEEEETT--TT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCCCCHHHh-c--C-C--------HHHHHHC-CCEEEeCCEEEEEECC--CC--EEEECCCCEEECCEEEEccCCc
Confidence 000000000 0 0 0 1112333 888875 699999754 32 4677888899999999999974
No 186
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.99 E-value=0.00016 Score=81.47 Aligned_cols=95 Identities=15% Similarity=0.091 Sum_probs=64.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.|+|||||..|++.|..+++.|.+|+|+++. .. . .
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~~--------l-------------------~---------------- 246 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS--IL--------L-------------------R---------------- 246 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CS--------S-------------------T----------------
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc--cc--------c-------------------c----------------
Confidence 4999999999999999999999999999972 00 0 0
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCC--CEEEE--EEcCcc---EEecCeEEEecCCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKND--NVEGV--CTFFGM---NFYAPSVVLTTGTF 230 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g--~v~gV--~t~dG~---~i~Ad~VVlAtG~~ 230 (699)
..|. .+...+.+.+++. |++++ ++.++++...+++ ....| ...+|. ++.+|.||+|+|..
T Consensus 247 ----------~~d~-~~~~~~~~~l~~~-GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 247 ----------GFDQ-DMANKIGEHMEEH-GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp ----------TSCH-HHHHHHHHHHHHT-TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred ----------cCCH-HHHHHHHHHHHHC-CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCc
Confidence 0111 2445566667665 89987 5777776543121 22223 334552 56799999999953
No 187
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.98 E-value=2.4e-05 Score=86.64 Aligned_cols=95 Identities=27% Similarity=0.311 Sum_probs=71.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||.+|+++|..|++.|.+|+|+|+. +...
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~----------~~~l---------------------------------- 203 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYM----------DRIL---------------------------------- 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSC----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecC----------Cccc----------------------------------
Confidence 46999999999999999999999999999983 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+ ..+ ..+...+.+.+++. |++++ +++|+++..+ +..+.|.+.+|.++.+|.||+|+|..
T Consensus 204 ---~-------~~~-~~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~--~~~v~v~~~~g~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 204 ---P-------TMD-LEVSRAAERVFKKQ-GLTIRTGVRVTAVVPE--AKGARVELEGGEVLEADRVLVAVGRR 263 (455)
T ss_dssp ---T-------TSC-HHHHHHHHHHHHHH-TCEEECSCCEEEEEEE--TTEEEEEETTSCEEEESEEEECSCEE
T ss_pred ---c-------ccC-HHHHHHHHHHHHHC-CCEEEECCEEEEEEEe--CCEEEEEECCCeEEEcCEEEECcCCC
Confidence 0 001 13445566667665 89988 6899999764 33455677788899999999999975
No 188
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.98 E-value=2.3e-05 Score=86.72 Aligned_cols=96 Identities=20% Similarity=0.152 Sum_probs=72.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+|+|+. +... .
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMF----------DAPL------------------P--------------- 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSS------------------T---------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeC----------Cchh------------------h---------------
Confidence 36999999999999999999999999999983 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++....|.+.+|+++.+|.||+|+|..
T Consensus 205 -----------~~~~-~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 205 -----------SFDP-MISETLVEVMNAE-GPQLHTNAIPKAVVKN-TDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp -----------TSCH-HHHHHHHHHHHHH-SCEEECSCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred -----------hhhH-HHHHHHHHHHHHC-CCEEEeCCEEEEEEEe-CCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 0111 2445566667776 89987 5899999764 334457888899889999999999964
No 189
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.97 E-value=9e-06 Score=91.42 Aligned_cols=46 Identities=13% Similarity=-0.014 Sum_probs=36.6
Q ss_pred ccCcccccCCCCCEEEecccCCCc--h-HHHHHHHHHHHHHHHHHHhcC
Q 048823 397 QCYRSLMTKKVEGLFFSGQINGTT--G-YEEAAAQGIISGINAARHSDG 442 (699)
Q Consensus 397 ~l~~~letk~i~gLf~AGqi~G~~--G-y~eA~a~G~~Ag~naa~~~~~ 442 (699)
.++++|+++..|++|.+||+.... . -.-|..||.++|.|..+..++
T Consensus 354 ~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~~~~ 402 (502)
T 4g6h_A 354 AVNDFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKMAQI 402 (502)
T ss_dssp EBCTTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eECCccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHHhcc
Confidence 467899998899999999987652 1 146888999999999886554
No 190
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.96 E-value=2.2e-05 Score=85.73 Aligned_cols=96 Identities=21% Similarity=0.354 Sum_probs=74.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..+++.|.+|+++++. +.. +..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~----------~~~------------------l~~-------------- 181 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAG----------DEL------------------LVR-------------- 181 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSS------------------SHH--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecC----------Ccc------------------chh--------------
Confidence 46999999999999999999999999999973 000 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++.. ++++.+|++.+|+++.||.||+|+|..
T Consensus 182 -----------~~~-~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 182 -----------VLG-RRIGAWLRGLLTEL-GVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp -----------HHC-HHHHHHHHHHHHHH-TCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred -----------hcC-HHHHHHHHHHHHHC-CCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 001 13455666677776 89998 689999875 357778999999999999999999975
No 191
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.96 E-value=1.4e-05 Score=88.68 Aligned_cols=42 Identities=21% Similarity=0.211 Sum_probs=35.4
Q ss_pred cccCCCCCEEEecccCC-CchHHHHHHHHHHHHHHHHHHhcCCC
Q 048823 402 LMTKKVEGLFFSGQING-TTGYEEAAAQGIISGINAARHSDGKS 444 (699)
Q Consensus 402 letk~i~gLf~AGqi~G-~~Gy~eA~a~G~~Ag~naa~~~~~~~ 444 (699)
++| .+||+|++||+.. ..-..+|..+|..||.|+..++.|+.
T Consensus 405 ~~T-s~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~~~~ 447 (456)
T 2vdc_G 405 KMT-NMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAKAKA 447 (456)
T ss_dssp CBC-SSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcC-CCCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 565 4899999999854 45578999999999999999998764
No 192
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.95 E-value=9.4e-06 Score=88.71 Aligned_cols=104 Identities=16% Similarity=0.136 Sum_probs=65.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC--ceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHH
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGA--KTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKR 153 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~ 153 (699)
..+||+|||||++|+++|..|++.|. +|+|+|+.. ..+...| .+.+.+.. +.. .+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~-~~~~~~~----------~~~~~~~~-~~~----~~~------ 63 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEA-ERPYDRP----------PLSKDFMA-HGD----AEK------ 63 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSC-SCCBCSG----------GGGTHHHH-HCC----GGG------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCC-CCcccCC----------CCCHHHhC-CCc----hhh------
Confidence 35899999999999999999999998 599999841 1110000 00000000 000 000
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEEe-eEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIRE-AMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~-~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
. ... .+.+ .+++++. ++|+.+..+ ++ .|.+.+|.++.+|.+|+|||+.
T Consensus 64 ---------~-----~~~----------~~~~-~~v~~~~~~~v~~i~~~--~~--~v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 64 ---------I-----RLD----------CKRA-PEVEWLLGVTAQSFDPQ--AH--TVALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp ---------S-----BCC----------CTTS-CSCEEEETCCEEEEETT--TT--EEEETTSCEEECSEEEECCCEE
T ss_pred ---------h-----hHH----------HHHH-CCCEEEcCCEEEEEECC--CC--EEEECCCCEEECCEEEECCCCC
Confidence 0 000 1223 3788875 679998753 32 4667788889999999999974
No 193
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.94 E-value=7.5e-06 Score=91.83 Aligned_cols=35 Identities=26% Similarity=0.464 Sum_probs=31.7
Q ss_pred CCcccEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
+..+||+|||||+||++||..|++. |.+|+|||+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~ 45 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSED 45 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 4568999999999999999999887 8999999985
No 194
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.92 E-value=3.1e-05 Score=86.35 Aligned_cols=97 Identities=16% Similarity=0.096 Sum_probs=72.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +... .
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 222 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRG----------ETVL------------------R--------------- 222 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSS----------SSSC------------------T---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeC----------Cccc------------------c---------------
Confidence 36999999999999999999999999999983 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc-cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG-MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG-~~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. |++++ ++.|+++..++++.+..|.+.+| .++.+|.||+|+|..
T Consensus 223 -----------~~d~-~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 223 -----------KFDE-CIQNTITDHYVKE-GINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp -----------TSCH-HHHHHHHHHHHHH-TCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred -----------ccCH-HHHHHHHHHHHhC-CeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 0121 3445566667776 89998 68999997642333567888899 789999999999964
No 195
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.92 E-value=3.6e-05 Score=84.93 Aligned_cols=96 Identities=27% Similarity=0.275 Sum_probs=71.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
..+|+|||||++|+++|..|++.|.+|+|+|+.. .... .
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~----------~~l~------------------~------------- 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD----------RPLG------------------V------------- 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS----------STTT------------------T-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc----------cccc------------------c-------------
Confidence 4689999999999999999999999999999831 0000 0
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++..+ +++..|.+ +|.++.+|.||+|+|..
T Consensus 188 ------------~~~-~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~--~~v~~v~~-~~~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 188 ------------YLD-KEFTDVLTEEMEAN-NITIATGETVERYEGD--GRVQKVVT-DKNAYDADLVVVAVGVR 245 (447)
T ss_dssp ------------TCC-HHHHHHHHHHHHTT-TEEEEESCCEEEEECS--SBCCEEEE-SSCEEECSEEEECSCEE
T ss_pred ------------cCC-HHHHHHHHHHHHhC-CCEEEcCCEEEEEEcc--CcEEEEEE-CCCEEECCEEEECcCCC
Confidence 011 13455667777776 89997 5889999743 55556666 45689999999999964
No 196
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.91 E-value=6.3e-06 Score=87.08 Aligned_cols=34 Identities=32% Similarity=0.437 Sum_probs=31.0
Q ss_pred CcccEEEECCChHHHHHHHHHHH--cCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASAR--LGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr--~G~kV~LlE~~ 109 (699)
.++||+|||||+||++||+.|++ .|++|+|+|++
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~ 99 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESS 99 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 46899999999999999999985 59999999985
No 197
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.91 E-value=5.8e-05 Score=84.00 Aligned_cols=97 Identities=22% Similarity=0.335 Sum_probs=71.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+|+|+. +....
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l~--------------------------------- 220 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQ----------PQIGA--------------------------------- 220 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSSS---------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeC----------Ccccc---------------------------------
Confidence 46999999999999999999999999999983 10000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc-----CccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF-----FGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~-----dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++..+++++.+.|.+. ++.++.+|.||+|+|..
T Consensus 221 -----------~~~-~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 221 -----------SMD-GEVAKATQKFLKKQ-GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp -----------SSC-HHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred -----------ccC-HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 011 13455666777775 89998 589999975212455667665 45689999999999964
No 198
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.90 E-value=0.0001 Score=89.77 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=33.7
Q ss_pred ccccCCCCCEEEecccCCC-chHHHHHHHHHHHHHHHHHHhc
Q 048823 401 SLMTKKVEGLFFSGQINGT-TGYEEAAAQGIISGINAARHSD 441 (699)
Q Consensus 401 ~letk~i~gLf~AGqi~G~-~Gy~eA~a~G~~Ag~naa~~~~ 441 (699)
+++| .+||+|++||+.+. .-..+|+.+|..||.|+..++.
T Consensus 468 ~~~T-s~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 468 TMQT-SEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp TCBC-SSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4566 48999999998874 5568999999999999998775
No 199
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.90 E-value=3.8e-05 Score=90.65 Aligned_cols=34 Identities=32% Similarity=0.456 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~ 368 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAK 368 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4689999999999999999999999999999985
No 200
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.88 E-value=5.8e-05 Score=83.84 Aligned_cols=95 Identities=24% Similarity=0.295 Sum_probs=70.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-+|+|||||..|+++|..|++.|.+|+|+|+. +....
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l~--------------------------------- 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYM----------PEILP--------------------------------- 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSST---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcC----------Ccccc---------------------------------
Confidence 36999999999999999999999999999983 00000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc-C--cc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF-F--GM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~-d--G~--~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++..+ ++ .+.|.+. + |+ ++.+|.||+|+|..
T Consensus 207 -----------~~~-~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 207 -----------QGD-PETAALLRRALEKE-GIRVRTKTKAVGYEKK-KD-GLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp -----------TSC-HHHHHHHHHHHHHT-TCEEECSEEEEEEEEE-TT-EEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred -----------ccC-HHHHHHHHHHHHhc-CCEEEcCCEEEEEEEe-CC-EEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 011 13445566667775 89998 6899999764 33 3456665 6 76 89999999999964
No 201
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.86 E-value=5.2e-05 Score=84.84 Aligned_cols=96 Identities=18% Similarity=0.149 Sum_probs=73.6
Q ss_pred ccEEEECCChHHHHHHHHHHHc---CCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 78 FDVIVVGGGHAGCEAALASARL---GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~---G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
-.++|||||..|++.|..+++. |.+|+|+|+. +.+. .
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~----------~~~l------------------~------------ 227 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRG----------DMIL------------------R------------ 227 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESS----------SSSS------------------T------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcC----------CCcc------------------c------------
Confidence 3699999999999999999999 9999999983 0000 0
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. |++++ ++.|+++..+ ++....|.+.+|+++.+|.||+|+|..
T Consensus 228 --------------~~d~-~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 228 --------------GFDS-ELRKQLTEQLRAN-GINVRTHENPAKVTKN-ADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp --------------TSCH-HHHHHHHHHHHHT-TEEEEETCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred --------------ccCH-HHHHHHHHHHHhC-CCEEEeCCEEEEEEEc-CCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 0111 3455666777775 99997 5899999865 334567888899889999999999965
No 202
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.85 E-value=5.6e-05 Score=84.75 Aligned_cols=96 Identities=20% Similarity=0.187 Sum_probs=73.1
Q ss_pred ccEEEECCChHHHHHHHHHHHc---CCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHh
Q 048823 78 FDVIVVGGGHAGCEAALASARL---GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRV 154 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~---G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~ 154 (699)
-.++|||||..|++.|..+++. |.+|+|+++. +.+. .
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~----------~~~l------------------~------------ 231 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRN----------NLIL------------------R------------ 231 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESS----------SSSC------------------T------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcC----------Cccc------------------c------------
Confidence 3699999999999999999999 9999999983 0000 0
Q ss_pred hccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 155 LNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 155 ~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. |++++ ++.|+++..+ ++....|.+.+|+++.+|.||+|+|..
T Consensus 232 --------------~~d~-~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 232 --------------GFDE-TIREEVTKQLTAN-GIEIMTNENPAKVSLN-TDGSKHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp --------------TSCH-HHHHHHHHHHHHT-TCEEEESCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred --------------ccCH-HHHHHHHHHHHhC-CCEEEeCCEEEEEEEc-CCceEEEEECCCcEEEcCEEEECCCCc
Confidence 0121 3445566677776 89987 6899999765 334567888899899999999999964
No 203
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.85 E-value=7.7e-06 Score=91.46 Aligned_cols=33 Identities=30% Similarity=0.520 Sum_probs=31.2
Q ss_pred cccEEEECCChHHHHHHHHHHHc-CCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARL-GAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~-G~kV~LlE~~ 109 (699)
.+||||||||++||+||+.|+++ |.+|+|+|++
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~ 43 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSN 43 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECC
Confidence 59999999999999999999985 9999999996
No 204
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.84 E-value=6.3e-05 Score=82.06 Aligned_cols=92 Identities=23% Similarity=0.279 Sum_probs=70.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+|+++. +.. +..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~------------------l~~-------------- 183 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQ----------PRL------------------MSR-------------- 183 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSS------------------STT--------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeC----------Ccc------------------ccc--------------
Confidence 46999999999999999999999999999983 100 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++. + + .|++.+|+++.||.||+|+|..
T Consensus 184 -----------~~~-~~~~~~l~~~l~~~-GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 184 -----------AAP-ATLADFVARYHAAQ-GVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp -----------TSC-HHHHHHHHHHHHHT-TCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEE
T ss_pred -----------ccC-HHHHHHHHHHHHHc-CcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCC
Confidence 011 13445566667776 89987 58999987 3 3 6788899899999999999964
No 205
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.83 E-value=5.9e-05 Score=83.79 Aligned_cols=94 Identities=17% Similarity=0.139 Sum_probs=71.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.|+|||||..|+++|..|++.|.+|+|+++. +... .
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~----------~~~l------------------~---------------- 203 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALE----------DRLL------------------F---------------- 203 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSS------------------T----------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcC----------Cccc------------------c----------------
Confidence 6999999999999999999999999999973 0000 0
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCcc-EEecCeEEEecCCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGM-NFYAPSVVLTTGTF 230 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~-~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++. ..|.+.+|+ ++.+|.||+|+|..
T Consensus 204 ----------~~~~-~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~~-~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 204 ----------QFDP-LLSATLAENMHAQ-GIETHLEFAVAALERD-AQG-TTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp ----------TSCH-HHHHHHHHHHHHT-TCEEESSCCEEEEEEE-TTE-EEEEETTCCEEEEESEEEECSCEE
T ss_pred ----------ccCH-HHHHHHHHHHHHC-CCEEEeCCEEEEEEEe-CCe-EEEEEeCCcEEEEcCEEEECCCCC
Confidence 0111 2334556667665 89998 6889999764 233 678888998 89999999999964
No 206
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.83 E-value=1.1e-05 Score=89.32 Aligned_cols=56 Identities=21% Similarity=0.207 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHccCCeEEE-eeEEEEEEecC-CCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 174 EYAMRMKNIVESTANLCIR-EAMVTDILLGK-NDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 174 ~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~-~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.+.+.|.+.++.. |++++ +++|++|..+. ++++++|.+. |.++.||.||+|+|.|.
T Consensus 243 ~l~~al~~~~~~~-G~~i~~~~~V~~i~~~~~~~~~~~V~~~-g~~~~ad~VV~a~~~~~ 300 (453)
T 2bcg_G 243 ELPQGFARLSAIY-GGTYMLDTPIDEVLYKKDTGKFEGVKTK-LGTFKAPLVIADPTYFP 300 (453)
T ss_dssp HHHHHHHHHHHHT-TCEEECSCCCCEEEEETTTTEEEEEEET-TEEEECSCEEECGGGCG
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEECCCCeEEEEEEC-CeEEECCEEEECCCccc
Confidence 5667777878776 66665 79999998752 4678888874 77899999999999984
No 207
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.83 E-value=5.4e-05 Score=83.70 Aligned_cols=96 Identities=19% Similarity=0.161 Sum_probs=71.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+|+|+. +.. +..
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~------------------l~~-------------- 187 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGH----------ERV------------------LYK-------------- 187 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESS----------SST------------------TTT--------------
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcC----------Cch------------------hhh--------------
Confidence 36999999999999999999999999999983 000 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++++..|.+ +|.++.||.||+|+|..
T Consensus 188 -----------~~~~-~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~~v~~v~~-~g~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 188 -----------YFDK-EFTDILAKDYEAH-GVNLVLGSKVAAFEEV-DDEIITKTL-DGKEIKSDIAILCIGFR 246 (452)
T ss_dssp -----------TSCH-HHHHHHHHHHHHT-TCEEEESSCEEEEEEE-TTEEEEEET-TSCEEEESEEEECCCEE
T ss_pred -----------hhhh-hHHHHHHHHHHHC-CCEEEcCCeeEEEEcC-CCeEEEEEe-CCCEEECCEEEECcCCC
Confidence 0111 3455666777776 89987 6899999754 466666665 77789999999999964
No 208
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.82 E-value=8.2e-05 Score=77.52 Aligned_cols=94 Identities=18% Similarity=0.265 Sum_probs=71.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|++.|..|++.|.+|+++++. +...
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~----------~~~~---------------------------------- 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRR----------DGFR---------------------------------- 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSS----------SSCC----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeC----------Cccc----------------------------------
Confidence 46999999999999999999999999999973 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC----c--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF----G--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d----G--~~i~Ad~VVlAtG~~ 230 (699)
.+ ..+...+.+.+++. |++++ ++.|+++..+ ++++.+|++.+ | .++.+|.||+|+|..
T Consensus 182 ------------~~-~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 182 ------------AE-KILIKRLMDKVENG-NIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp ------------CC-HHHHHHHHHHHHTS-SEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred ------------cC-HHHHHHHHHhcccC-CeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 00 12334455566665 89998 6899999865 45788888765 4 479999999999964
No 209
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.80 E-value=6.7e-05 Score=84.19 Aligned_cols=96 Identities=19% Similarity=0.124 Sum_probs=72.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..|++.|.+|+|+|+. +.+. .
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 213 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARG----------NRIL------------------R--------------- 213 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSS----------SSSC------------------T---------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecC----------CccC------------------c---------------
Confidence 36999999999999999999999999999973 1000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccE-EecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMN-FYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~-i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. |++++ ++.|+++..+ ++....|.+.+|++ +.+|.||+|+|..
T Consensus 214 -----------~~d~-~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 214 -----------KFDE-SVINVLENDMKKN-NINIVTFADVVEIKKV-SDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp -----------TSCH-HHHHHHHHHHHHT-TCEEECSCCEEEEEES-STTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred -----------ccch-hhHHHHHHHHHhC-CCEEEECCEEEEEEEc-CCceEEEEECCCcEEEECCEEEECCCCC
Confidence 0121 3445566677775 89998 6899999764 33345678889987 9999999999975
No 210
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.80 E-value=0.00011 Score=81.22 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=72.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.++|||||..|++.|..+++.|.+|+++++. +.. +..
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~------------------l~~-------------- 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESL----------ENL------------------LPK-------------- 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSS------------------STT--------------
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEcc----------Ccc------------------ccc--------------
Confidence 46999999999999999999999999999983 000 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. |++++ ++.|+++..+ ++++ .|.+.+| ++.||.||+|+|..
T Consensus 186 -----------~~d~-~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~~v-~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 186 -----------YFDK-EMVAEVQKSLEKQ-AVIFHFEETVLGIEET-ANGI-VLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp -----------TCCH-HHHHHHHHHHHTT-TEEEEETCCEEEEEEC-SSCE-EEEESSC-EEEESEEEECSCCB
T ss_pred -----------cCCH-HHHHHHHHHHHHc-CCEEEeCCEEEEEEcc-CCeE-EEEECCC-EEEeCEEEECcCCC
Confidence 0122 3556667777776 99997 5899999865 5666 7888777 89999999999964
No 211
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.79 E-value=8.1e-05 Score=82.74 Aligned_cols=96 Identities=21% Similarity=0.293 Sum_probs=73.2
Q ss_pred ccEEEECCChHHHHHHHHHHHc-CCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 78 FDVIVVGGGHAGCEAALASARL-GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~-G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
-+|+|||||..|+++|..+++. |.+|+++++. +.. +..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~----------~~~------------------l~~------------- 198 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELA----------DQI------------------MPG------------- 198 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSS----------SSS------------------STT-------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEcc----------Ccc------------------ccc-------------
Confidence 4699999999999999999999 9999999973 000 000
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++..+ ++++. |.+.+|+++.||.||+|+|..
T Consensus 199 ------------~~~-~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~~v~-v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 199 ------------FTS-KSLSQMLRHDLEKN-DVVVHTGEKVVRLEGE-NGKVA-RVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp ------------TSC-HHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SSBEE-EEEESSCEEECSEEEECSCEE
T ss_pred ------------ccC-HHHHHHHHHHHHhc-CCEEEeCCEEEEEEcc-CCeEE-EEEeCCCEEEcCEEEECCCCC
Confidence 011 13556667777775 89998 5899999864 45554 778889899999999999975
No 212
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.79 E-value=9.7e-05 Score=81.69 Aligned_cols=95 Identities=22% Similarity=0.217 Sum_probs=69.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-+|+|||||..|+++|..|++.|.+|+|+|+. +...
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l---------------------------------- 206 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGA----------GEIL---------------------------------- 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSSS----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC----------Cccc----------------------------------
Confidence 46999999999999999999999999999983 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---CccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~~i~Ad~VVlAtG~~ 230 (699)
+ ..++ .+...+.+.+++. |++++ ++.|+++..+ ++. +.|.+. ++.++.+|.||+|+|..
T Consensus 207 ---~-------~~~~-~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 207 ---S-------GFEK-QMAAIIKKRLKKK-GVEVVTNALAKGAEER-EDG-VTVTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp ---T-------TSCH-HHHHHHHHHHHHT-TCEEEESEEEEEEEEE-TTE-EEEEEEETTEEEEEEESEEEECSCEE
T ss_pred ---c-------ccCH-HHHHHHHHHHHHC-CCEEEeCCEEEEEEEe-CCe-EEEEEEeCCceeEEEcCEEEECcCCC
Confidence 0 0111 3445566667775 89987 5899999754 333 445543 45689999999999964
No 213
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.74 E-value=9.7e-05 Score=82.61 Aligned_cols=95 Identities=24% Similarity=0.256 Sum_probs=70.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+|+++. +... ..
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~~-------------- 232 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVV----------DTCL------------------AG-------------- 232 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSTT------------------TT--------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcc----------cchh------------------hh--------------
Confidence 46999999999999999999999999999983 0000 00
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++.. ++++..|.+ +|.++.+|.||+|+|..
T Consensus 233 -----------~~~~-~~~~~l~~~l~~~-GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 233 -----------YYDR-DLTDLMAKNMEEH-GIQLAFGETVKEVAG--NGKVEKIIT-DKNEYDVDMVILAVGFR 290 (490)
T ss_dssp -----------TSCH-HHHHHHHHHHHTT-TCEEEETCCEEEEEC--SSSCCEEEE-SSCEEECSEEEECCCEE
T ss_pred -----------HHHH-HHHHHHHHHHHhC-CeEEEeCCEEEEEEc--CCcEEEEEE-CCcEEECCEEEECCCCC
Confidence 0111 3455666777776 89987 589999874 455656666 67789999999999964
No 214
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.74 E-value=8.4e-05 Score=82.92 Aligned_cols=95 Identities=14% Similarity=0.087 Sum_probs=71.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..|++.|.+|+|+|+. +... .
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~----------~~~l------------------~--------------- 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMM----------DGLM------------------Q--------------- 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSS----------SSSS------------------T---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEEC----------Cccc------------------c---------------
Confidence 36999999999999999999999999999983 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC----ccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF----GMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d----G~~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. |++++ ++.|+++..+ +....|++.+ |+++.+|.||+|+|..
T Consensus 223 -----------~~~~-~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~--~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 223 -----------GADR-DLVKVWQKQNEYR-FDNIMVNTKTVAVEPK--EDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp -----------TSCH-HHHHHHHHHHGGG-EEEEECSCEEEEEEEE--TTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred -----------ccCH-HHHHHHHHHHHhc-CCEEEECCEEEEEEEc--CCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 0111 3445566677775 89998 6899999754 3345677766 7789999999999964
No 215
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.73 E-value=0.00013 Score=81.24 Aligned_cols=97 Identities=21% Similarity=0.239 Sum_probs=70.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..+++.|.+|+|+|+. +.... +
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l~------------------~-------------- 216 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFL----------GHVGG------------------V-------------- 216 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSSC------------------S--------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEecc----------CccCC------------------c--------------
Confidence 36999999999999999999999999999983 10000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEE-----cCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCT-----FFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t-----~dG~~i~Ad~VVlAtG~~ 230 (699)
..+. .+...+.+.+++. |++++ ++.|+++..+ ++..+.|.+ .++.++.+|.||+|+|..
T Consensus 217 -----------~~~~-~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 217 -----------GIDM-EISKNFQRILQKQ-GFKFKLNTKVTGATKK-SDGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp -----------SCCH-HHHHHHHHHHHHT-TCEEECSEEEEEEEEC-TTSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred -----------ccCH-HHHHHHHHHHHHC-CCEEEeCceEEEEEEc-CCceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 0111 3445566777775 89998 6899999865 333244553 456689999999999964
No 216
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.71 E-value=0.00012 Score=81.67 Aligned_cols=95 Identities=26% Similarity=0.311 Sum_probs=73.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +... .
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~----------~~~l------------------~--------------- 228 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRG----------DLIL------------------R--------------- 228 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSS------------------T---------------
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECC----------Cccc------------------c---------------
Confidence 46999999999999999999999999999973 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ +++ +.|.+.+|+++.||.||+|+|..
T Consensus 229 -----------~~~~-~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~-~~~-v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 229 -----------NFDY-DLRQLLNDAMVAK-GISIIYEATVSQVQST-ENC-YNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp -----------TSCH-HHHHHHHHHHHHH-TCEEESSCCEEEEEEC-SSS-EEEEETTSCEEEESEEEECCCEE
T ss_pred -----------ccCH-HHHHHHHHHHHHC-CCEEEeCCEEEEEEee-CCE-EEEEECCCcEEEcCEEEEeeCCC
Confidence 0111 3455566777776 89998 5899999865 344 47888999899999999999964
No 217
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.71 E-value=2.4e-05 Score=91.15 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||+||++||..|++.|++|+|+|+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~ 405 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAH 405 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4589999999999999999999999999999984
No 218
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.70 E-value=0.00012 Score=76.66 Aligned_cols=91 Identities=15% Similarity=0.228 Sum_probs=68.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+.+|..|++.|.+|+++++.. ....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~----------~~~~--------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD----------HLRA--------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS----------SCCS---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC----------ccCC---------------------------------
Confidence 469999999999999999999999999999730 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC-----ccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF-----GMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d-----G~~i~Ad~VVlAtG~~ 230 (699)
...+.+.+.+..|++++ ++.|+++..+ ++++.+|++.+ +.++.+|.||+|+|..
T Consensus 211 ------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 ------------------STIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp ------------------CHHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred ------------------CHHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 01123334343589998 6899999875 56788888776 4589999999999963
No 219
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.70 E-value=0.00011 Score=81.79 Aligned_cols=94 Identities=28% Similarity=0.323 Sum_probs=71.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-+|+|||||..|+++|..|++.|.+|+|+|+... ..
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~----------~l---------------------------------- 222 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH----------IG---------------------------------- 222 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG----------TT----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc----------hh----------------------------------
Confidence 5799999999999999999999999999998300 00
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
+ ..+ ..+...+.+.+++. |++++ ++.|+++.. ++++..|.+.++ ++.||.||+|+|..
T Consensus 223 ---~-------~~~-~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~--~~~v~~v~~~~~-~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 223 ---T-------IYD-GDMAEYIYKEADKH-HIEILTNENVKAFKG--NERVEAVETDKG-TYKADLVLVSVGVK 281 (480)
T ss_dssp ---S-------SSC-HHHHHHHHHHHHHT-TCEEECSCCEEEEEE--SSBEEEEEETTE-EEECSEEEECSCEE
T ss_pred ---h-------cCC-HHHHHHHHHHHHHc-CcEEEcCCEEEEEEc--CCcEEEEEECCC-EEEcCEEEECcCCC
Confidence 0 011 13455666777776 89997 689999875 356767777654 79999999999975
No 220
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.68 E-value=0.00016 Score=80.96 Aligned_cols=95 Identities=19% Similarity=0.186 Sum_probs=72.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.++|||||..|++.|..+++.|.+|+++++. +... .
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 219 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQ----------DHVL------------------P--------------- 219 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSS----------SSSS------------------C---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcC----------Cccc------------------c---------------
Confidence 36999999999999999999999999999973 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ +++ +.|.+.+|.++.||.||+|+|..
T Consensus 220 -----------~~d~-~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~-~~~-v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 220 -----------YEDA-DAALVLEESFAER-GVRLFKNARAASVTRT-GAG-VLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp -----------CSSH-HHHHHHHHHHHHT-TCEEETTCCEEEEEEC-SSS-EEEEETTSCEEEESEEEECCCEE
T ss_pred -----------ccCH-HHHHHHHHHHHHC-CCEEEeCCEEEEEEEe-CCE-EEEEECCCcEEEcCEEEECCCCC
Confidence 0111 3455666777776 89998 6899999865 344 45777888899999999999975
No 221
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.68 E-value=0.00014 Score=80.40 Aligned_cols=139 Identities=18% Similarity=0.174 Sum_probs=73.9
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceeEEeeecccccCCCCCCCCCCCccchhhHHHHh--hcCccchhhchhhhhHH
Q 048823 78 FDVIVVGGGHAGCEAALASARL--GAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDA--LGGEIGKVADMCYLQKR 153 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~--lg~~~~~~~d~~~i~~~ 153 (699)
-.|+|||||..|+++|..|++. |.+|+++++... + + +.- ...+..++.. +-..+....+. ...+
T Consensus 228 ~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~-~--~---p~~----~~~~~~~~~~p~~~~~~~~l~~~--~~~~ 295 (463)
T 3s5w_A 228 MKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASA-L--K---PAD----DSPFVNEVFAPKFTDLIYSREHA--ERER 295 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSS-C--C---BCC----CCHHHHGGGSHHHHHHHHHSCHH--HHHH
T ss_pred CeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCC-C--c---Ccc----CCccchhccChhHHHHHhcCCHH--HHHH
Confidence 5799999999999999999999 899999998411 1 0 000 0011111000 00000000000 0011
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEEEec
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVVLTT 227 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VVlAt 227 (699)
++...........+...-...|...+.+.+....++.++ ++.|+++..+ +..+.|.+. +|+ ++.+|.||+||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~--~~~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 296 LLREYHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATAT--AQGIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp HHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEE--TTEEEEEEEETTTCCEEEEEESEEEECC
T ss_pred HHHHhhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEec--CCEEEEEEEEcCCCCeEEEECCEEEEee
Confidence 111000000000000111223444555556555689998 6889999764 344556665 665 48999999999
Q ss_pred CCC
Q 048823 228 GTF 230 (699)
Q Consensus 228 G~~ 230 (699)
|..
T Consensus 374 G~~ 376 (463)
T 3s5w_A 374 GYE 376 (463)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 222
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.67 E-value=0.00013 Score=80.79 Aligned_cols=95 Identities=21% Similarity=0.295 Sum_probs=73.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.++|||||..|++.|..+++.|.+|+++++.. .. +.
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~----------~~------------------l~--------------- 207 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK----------EI------------------LS--------------- 207 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS----------SS------------------ST---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC----------cc------------------cc---------------
Confidence 469999999999999999999999999999730 00 00
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEE-EcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVC-TFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~-t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++....|. +.+|+ +.+|.||+|+|..
T Consensus 208 -----------~~~~-~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~g~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 208 -----------RFDQ-DMRRGLHAAMEEK-GIRILCEDIIQSVSAD-ADGRRVATTMKHGE-IVADQVMLALGRM 267 (463)
T ss_dssp -----------TSCH-HHHHHHHHHHHHT-TCEEECSCCEEEEEEC-TTSCEEEEESSSCE-EEESEEEECSCEE
T ss_pred -----------ccCH-HHHHHHHHHHHHC-CCEEECCCEEEEEEEc-CCCEEEEEEcCCCe-EEeCEEEEeeCcc
Confidence 0121 3455667777776 89998 5899999865 34446788 88997 9999999999975
No 223
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.67 E-value=1.1e-05 Score=89.57 Aligned_cols=45 Identities=11% Similarity=-0.001 Sum_probs=34.9
Q ss_pred cCcccccCCCCCEEEecccC-CCchH-HHHHHHHHHHHHHHHHHhcC
Q 048823 398 CYRSLMTKKVEGLFFSGQIN-GTTGY-EEAAAQGIISGINAARHSDG 442 (699)
Q Consensus 398 l~~~letk~i~gLf~AGqi~-G~~Gy-~eA~a~G~~Ag~naa~~~~~ 442 (699)
.+..++...+||+|++||+. |+.|. ..|..+|..|+.|++..+.+
T Consensus 342 vn~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 342 PNVGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp CEETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 35566644699999999986 67764 47999999999999876543
No 224
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.65 E-value=0.00012 Score=78.81 Aligned_cols=89 Identities=24% Similarity=0.304 Sum_probs=67.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+|+|+. +....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l~--------------------------------- 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRG----------AMFLG--------------------------------- 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSS----------SCCTT---------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCC----------Ceecc---------------------------------
Confidence 46999999999999999999999999999983 11000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+ ..+.+.+.+.+++. |++++ ++.|+++. .+ +|.+.+|+ +.+|.||+|+|..
T Consensus 181 ------------~~-~~~~~~l~~~l~~~-gV~i~~~~~v~~i~---~~---~v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 181 ------------LD-EELSNMIKDMLEET-GVKFFLNSELLEAN---EE---GVLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp ------------CC-HHHHHHHHHHHHHT-TEEEECSCCEEEEC---SS---EEEETTEE-EECSCEEEECCEE
T ss_pred ------------CC-HHHHHHHHHHHHHC-CCEEEcCCEEEEEE---ee---EEEECCCE-EEcCEEEECcCCC
Confidence 01 13445566667776 99998 58898885 12 47788887 9999999999964
No 225
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00013 Score=80.76 Aligned_cols=93 Identities=19% Similarity=0.222 Sum_probs=67.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-+|+|||||.+|+++|..|++.|.+|+|+|+. +....
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l~--------------------------------- 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEAR----------ERILP--------------------------------- 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS----------SSSST---------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcC----------Ccccc---------------------------------
Confidence 36999999999999999999999999999983 10000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG--~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++.. ++ +.+...+| .++.+|.||+|+|..
T Consensus 209 -----------~~~~-~~~~~l~~~l~~~-gv~i~~~~~v~~i~~---~~-v~v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 209 -----------TYDS-ELTAPVAESLKKL-GIALHLGHSVEGYEN---GC-LLANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp -----------TSCH-HHHHHHHHHHHHH-TCEEETTCEEEEEET---TE-EEEECSSSCCCEECCSCEEECCCEE
T ss_pred -----------ccCH-HHHHHHHHHHHHC-CCEEEECCEEEEEEe---CC-EEEEECCCceEEEECCEEEECcCCC
Confidence 0111 2444556666665 89998 689999863 33 33444456 589999999999964
No 226
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.63 E-value=0.00019 Score=80.38 Aligned_cols=96 Identities=20% Similarity=0.205 Sum_probs=70.4
Q ss_pred ccEEEECCChHHHHHHHHHHH----cCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHH
Q 048823 78 FDVIVVGGGHAGCEAALASAR----LGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKR 153 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr----~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~ 153 (699)
-.|+|||||..|+++|..|++ .|.+|+++++.. .. +.+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~----------~~------------------~~~---------- 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK----------GN------------------MGK---------- 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS----------ST------------------TTT----------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc----------cc------------------ccc----------
Confidence 369999999999999999987 478899998630 00 000
Q ss_pred hhccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 154 VLNTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 154 ~~~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. ||+++ ++.|+++..+ ++ ...|++.+|+++.||.||+|+|..
T Consensus 223 ---------------~l~-~~~~~~~~~~l~~~-GV~v~~~~~V~~i~~~-~~-~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 223 ---------------ILP-EYLSNWTMEKVRRE-GVKVMPNAIVQSVGVS-SG-KLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp ---------------TSC-HHHHHHHHHHHHTT-TCEEECSCCEEEEEEE-TT-EEEEEETTSCEEEESEEEECCCEE
T ss_pred ---------------cCC-HHHHHHHHHHHHhc-CCEEEeCCEEEEEEec-CC-eEEEEECCCCEEECCEEEECCCCC
Confidence 001 13445566677776 89998 5889998754 33 447888999999999999999975
No 227
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.62 E-value=0.0002 Score=79.47 Aligned_cols=93 Identities=19% Similarity=0.171 Sum_probs=70.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..+++.|.+|+++++. +...
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l---------------------------------- 212 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARN----------TLFF---------------------------------- 212 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------CTTT----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEEC----------CccC----------------------------------
Confidence 36999999999999999999999999999973 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+...+.+.+++. |++++ ++.|+++..+ +..+.|.+.+ .++.+|.||+|+|.+
T Consensus 213 -----------~~~-~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~--~~~~~v~~~~-~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 213 -----------RED-PAIGEAVTAAFRAE-GIEVLEHTQASQVAHM--DGEFVLTTTH-GELRADKLLVATGRT 270 (467)
T ss_dssp -----------TSC-HHHHHHHHHHHHHT-TCEEETTCCEEEEEEE--TTEEEEEETT-EEEEESEEEECSCEE
T ss_pred -----------CCC-HHHHHHHHHHHHhC-CCEEEcCCEEEEEEEe--CCEEEEEECC-cEEEcCEEEECCCCC
Confidence 001 13455667777776 89998 6899999754 4455677764 479999999999975
No 228
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.60 E-value=1.8e-05 Score=96.58 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=31.5
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..+||+|||||+||++||+.|++.|+ +|+|+|+.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~ 220 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQ 220 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 35899999999999999999999999 79999983
No 229
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.59 E-value=0.00033 Score=72.62 Aligned_cols=90 Identities=27% Similarity=0.344 Sum_probs=67.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+++|..|++.|.+|+++++. +...
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~----------~~~~---------------------------------- 180 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA----------PEMK---------------------------------- 180 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSS----------SSCC----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeC----------cccC----------------------------------
Confidence 36999999999999999999999999999973 1100
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---cc--EEecCeEEEecCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF---GM--NFYAPSVVLTTGT 229 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G~--~i~Ad~VVlAtG~ 229 (699)
.+ ..+.+.+.+..|++++ ++.|+++..+ ++++.+|++.+ |+ ++.+|.||+|+|.
T Consensus 181 ------------~~-----~~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 181 ------------AD-----QVLQDKLRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp ------------SC-----HHHHHHHHTCTTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ------------cc-----HHHHHHHhhCCCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 00 1123344554589998 6899999865 56777887764 53 7899999999985
No 230
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.59 E-value=0.00024 Score=78.74 Aligned_cols=95 Identities=18% Similarity=0.256 Sum_probs=68.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+|+++. +.+. .
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFA----------PRCA------------------P--------------- 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSS------------------T---------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecC----------Cccc------------------c---------------
Confidence 36999999999999999999999999999983 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHH-HccCCeEEE-eeEEEEEEecCCCCEEEEEEc--Cc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIV-ESTANLCIR-EAMVTDILLGKNDNVEGVCTF--FG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l-~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~--dG--~~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+ ++. |++++ ++.|+++..+ ++. +.|.+. +| .++.+|.||+|+|..
T Consensus 212 -----------~~d~-~~~~~l~~~l~~~~-gv~i~~~~~v~~i~~~-~~~-~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 212 -----------TLDE-DVTNALVGALAKNE-KMKFMTSTKVVGGTNN-GDS-VSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp -----------TSCH-HHHHHHHHHHHHHT-CCEEECSCEEEEEEEC-SSS-EEEEEECC---EEEEEESEEEECSCEE
T ss_pred -----------cCCH-HHHHHHHHHHhhcC-CcEEEeCCEEEEEEEc-CCe-EEEEEEcCCCceEEEECCEEEECCCcc
Confidence 0111 2455566667 665 89998 5899999764 333 445554 66 589999999999975
No 231
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.59 E-value=0.00028 Score=78.11 Aligned_cols=95 Identities=18% Similarity=0.232 Sum_probs=69.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+|+++. +.+. .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFL----------PRAL------------------P--------------- 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSS------------------T---------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcC----------Cccc------------------c---------------
Confidence 36999999999999999999999999999983 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc-Cc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF-FG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~-dG--~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++. +.|.+. +| .++.+|.||+|+|..
T Consensus 209 -----------~~~~-~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~~-~~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 209 -----------NEDA-DVSKEIEKQFKKL-GVTILTATKVESIADG-GSQ-VTVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp -----------TSCH-HHHHHHHHHHHHH-TCEEECSCEEEEEEEC-SSC-EEEEEESSSCEEEEEESEEEECSCEE
T ss_pred -----------ccCH-HHHHHHHHHHHHc-CCEEEeCcEEEEEEEc-CCe-EEEEEEcCCceEEEEcCEEEECCCCC
Confidence 0111 2445566667766 89987 6899999754 333 345554 56 589999999999964
No 232
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.57 E-value=0.00028 Score=80.07 Aligned_cols=95 Identities=22% Similarity=0.268 Sum_probs=70.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.|+|||||..|+++|..|++.|.+|+++++. +... .
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l------------------~---------------- 188 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELA----------DQVM------------------T---------------- 188 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSSC------------------T----------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcC----------Cccc------------------h----------------
Confidence 6999999999999999999999999999983 0000 0
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEec------------------CCCCEEEEEEcCccEEe
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLG------------------KNDNVEGVCTFFGMNFY 219 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e------------------~~g~v~gV~t~dG~~i~ 219 (699)
..+. .+...+.+.+++. |++++ ++.|+++..+ ++++ ..+++.+|+++.
T Consensus 189 ----------~~~~-~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~g~~i~ 255 (565)
T 3ntd_A 189 ----------PVDR-EMAGFAHQAIRDQ-GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH-LSLTLSNGELLE 255 (565)
T ss_dssp ----------TSCH-HHHHHHHHHHHHT-TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE-EEEEETTSCEEE
T ss_pred ----------hcCH-HHHHHHHHHHHHC-CCEEEeCCeEEEEeccccccccccccccccccccCCCc-EEEEEcCCCEEE
Confidence 0111 3445556667665 89987 5889998752 1333 446678888999
Q ss_pred cCeEEEecCCC
Q 048823 220 APSVVLTTGTF 230 (699)
Q Consensus 220 Ad~VVlAtG~~ 230 (699)
||.||+|+|..
T Consensus 256 ~D~vi~a~G~~ 266 (565)
T 3ntd_A 256 TDLLIMAIGVR 266 (565)
T ss_dssp ESEEEECSCEE
T ss_pred cCEEEECcCCc
Confidence 99999999975
No 233
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.55 E-value=4.9e-05 Score=82.79 Aligned_cols=34 Identities=35% Similarity=0.493 Sum_probs=32.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHc-CCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARL-GAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~-G~kV~LlE~~ 109 (699)
.++||+|||||++|++||+.|++. |.+|+|+|++
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~ 40 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERR 40 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 468999999999999999999999 9999999986
No 234
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.55 E-value=0.00035 Score=77.73 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=70.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +.+. .
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 224 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRH----------DKVL------------------R--------------- 224 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSC------------------T---------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeC----------Cccc------------------c---------------
Confidence 36999999999999999999999999999973 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC-------ccEEecCeEEEecCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF-------GMNFYAPSVVLTTGT 229 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d-------G~~i~Ad~VVlAtG~ 229 (699)
..|. .+...+.+.+++. |++++ ++.|+++..++++....|.+.+ |.++.+|.||+|+|.
T Consensus 225 -----------~~d~-~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 225 -----------SFDS-MISTNCTEELENA-GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp -----------TSCH-HHHHHHHHHHHHT-TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred -----------ccCH-HHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 0111 3445566667765 89998 5899999765333234566654 257899999999996
Q ss_pred C
Q 048823 230 F 230 (699)
Q Consensus 230 ~ 230 (699)
.
T Consensus 292 ~ 292 (478)
T 3dk9_A 292 V 292 (478)
T ss_dssp E
T ss_pred c
Confidence 4
No 235
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.55 E-value=4.7e-05 Score=85.63 Aligned_cols=34 Identities=35% Similarity=0.532 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|++||+.|++.|++|+|+|++
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~ 36 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEAR 36 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3579999999999999999999999999999996
No 236
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.53 E-value=0.00018 Score=74.70 Aligned_cols=91 Identities=16% Similarity=0.181 Sum_probs=66.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+++|..|++.|.+|+++++. +...
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~----------~~~~---------------------------------- 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRR----------DGFR---------------------------------- 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSS----------SSCC----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeC----------CccC----------------------------------
Confidence 46999999999999999999999999999973 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VVlAtG~~ 230 (699)
.+. .+.+.+.+..|++++ ++.|+++..+ ++++.+|.+. +|+ ++.+|.||+|+|..
T Consensus 180 ------------~~~-----~~~~~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 180 ------------CAP-----ITLEHAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp ------------SCH-----HHHHHHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ------------CCH-----HHHHHHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 000 122334333589998 6899999754 4566677765 675 78999999999953
No 237
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.53 E-value=0.0002 Score=79.41 Aligned_cols=95 Identities=17% Similarity=0.253 Sum_probs=69.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+|+|+. +... .
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~----------~~~l------------------~--------------- 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFA----------SEIV------------------P--------------- 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSS----------SSSS------------------T---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcC----------Cccc------------------c---------------
Confidence 46999999999999999999999999999983 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Cc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG--~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++. +.|.+. +| .++.+|.||+|+|..
T Consensus 215 -----------~~~~-~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 215 -----------TMDA-EIRKQFQRSLEKQ-GMKFKLKTKVVGVDTS-GDG-VKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp -----------TSCH-HHHHHHHHHHHHS-SCCEECSEEEEEEECS-SSS-EEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred -----------cccH-HHHHHHHHHHHHc-CCEEEeCCEEEEEEEc-CCe-EEEEEEecCCCcceEEECCEEEECCCCC
Confidence 0111 3455566777775 89987 6899999754 333 445544 44 589999999999964
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.52 E-value=0.00036 Score=77.95 Aligned_cols=95 Identities=29% Similarity=0.351 Sum_probs=69.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +.+. .
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 235 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFL----------DTIL------------------G--------------- 235 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSS----------SSSS------------------S---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecc----------cccc------------------c---------------
Confidence 36999999999999999999999999999973 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---c--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF---G--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G--~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++ ...|.+.+ | .++.+|.||+|+|..
T Consensus 236 -----------~~d~-~~~~~l~~~l~~~-gV~v~~~~~v~~i~~~-~~-~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 236 -----------GMDG-EVAKQLQRMLTKQ-GIDFKLGAKVTGAVKS-GD-GAKVTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp -----------SSCH-HHHHHHHHHHHHT-TCEEECSEEEEEEEEE-TT-EEEEEEEETTSCCCEEEEESEEEECCCCE
T ss_pred -----------cCCH-HHHHHHHHHHHhC-CCEEEECCeEEEEEEe-CC-EEEEEEEecCCCceEEEEcCEEEEeeCCc
Confidence 0111 3455566667775 89998 5899999765 33 34455542 5 589999999999964
No 239
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.51 E-value=0.00041 Score=78.53 Aligned_cols=93 Identities=15% Similarity=0.094 Sum_probs=71.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.++|||||..|++.|..+++.|.+|+|+++. . .. .
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~--------~L-------------------~---------------- 259 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRS--I--------VL-------------------R---------------- 259 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESS--C--------SS-------------------T----------------
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccc--c--------cc-------------------c----------------
Confidence 4999999999999999999999999999862 0 00 0
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..|. .+...+.+.+++. |+.++ +..|..+... +....|.+.++..+.+|.|++|+|..
T Consensus 260 ----------~~D~-ei~~~l~~~l~~~-gi~~~~~~~v~~~~~~--~~~~~v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 260 ----------GFDQ-QCAVKVKLYMEEQ-GVMFKNGILPKKLTKM--DDKILVEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp ----------TSCH-HHHHHHHHHHHHT-TCEEEETCCEEEEEEE--TTEEEEEETTSCEEEESEEEECSCEE
T ss_pred ----------ccch-hHHHHHHHHHHhh-cceeecceEEEEEEec--CCeEEEEEcCCCeEEEEEEEEccccc
Confidence 1232 3556677777776 88887 5888888765 34456788888889999999999964
No 240
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.51 E-value=6.8e-05 Score=81.74 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLG-AKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G-~kV~LlE~~ 109 (699)
..+||+|||||++|++||+.|++.| .+|+|+|++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~ 39 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERT 39 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECC
Confidence 3579999999999999999999999 999999985
No 241
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.50 E-value=0.00041 Score=77.57 Aligned_cols=94 Identities=26% Similarity=0.253 Sum_probs=68.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..+++.|.+|+++++. +.+..
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----------~~~l~--------------------------------- 211 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRS----------GSVAN--------------------------------- 211 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCT----------TCCTT---------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEEC----------Ccccc---------------------------------
Confidence 36999999999999999999999999999983 11000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc--Cc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF--FG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~--dG--~~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. +.++ ++.|+++..+ ++.+. |.+. +| .++.+|.||+|+|..
T Consensus 212 -----------~~d~-~~~~~l~~~l~~~--V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 212 -----------LQDE-EMKRYAEKTFNEE--FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp -----------CCCH-HHHHHHHHHHHTT--SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred -----------cCCH-HHHHHHHHHHhhC--cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 0111 3455566666663 8887 6899999865 44443 5553 67 689999999999964
No 242
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.50 E-value=0.00045 Score=76.74 Aligned_cols=95 Identities=23% Similarity=0.197 Sum_probs=69.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +.. +.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~------------------l~--------------- 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAM----------DKF------------------LP--------------- 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSS------------------ST---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecC----------CCc------------------Cc---------------
Confidence 36999999999999999999999999999983 000 00
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc---cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG---MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG---~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. |++++ ++.|+++..+ ++. ..|.+.++ .++.+|.||+|+|..
T Consensus 218 -----------~~~~-~~~~~l~~~l~~~-Gv~v~~~~~v~~i~~~-~~~-~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 218 -----------AVDE-QVAKEAQKILTKQ-GLKILLGARVTGTEVK-NKQ-VTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp -----------TSCH-HHHHHHHHHHHHT-TEEEEETCEEEEEEEC-SSC-EEEEEESSSEEEEEEESEEEECSCEE
T ss_pred -----------ccCH-HHHHHHHHHHHhC-CCEEEECCEEEEEEEc-CCE-EEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 0111 3455666667775 89997 6899999865 333 34665544 579999999999963
No 243
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.49 E-value=0.0003 Score=80.46 Aligned_cols=93 Identities=19% Similarity=0.185 Sum_probs=70.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +... .
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 224 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMA----------NQVM------------------P--------------- 224 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSC------------------T---------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecC----------Cccc------------------c---------------
Confidence 36999999999999999999999999999973 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+. .+...+.+.+++. |++++ ++.|+++..+ ++ +|.+.+|+++.+|.||+|+|..
T Consensus 225 -----------~~~~-~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 225 -----------PIDY-EMAAYVHEHMKNH-DVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp -----------TSCH-HHHHHHHHHHHHT-TCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEE
T ss_pred -----------cCCH-HHHHHHHHHHHHc-CCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCC
Confidence 0111 3455566667765 89988 5899999753 22 5778899899999999999975
No 244
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.49 E-value=0.00021 Score=74.86 Aligned_cols=90 Identities=19% Similarity=0.281 Sum_probs=66.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|++.|..|++.|.+|+++++. +...
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~----------~~~~---------------------------------- 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRR----------DTLR---------------------------------- 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSS----------SSCC----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCC----------CcCC----------------------------------
Confidence 36999999999999999999999999999973 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VVlAtG~~ 230 (699)
.+. .+.+.+.+..+++++ ++.|+++.. ++++.+|.+. +|+ ++.+|.||+|+|..
T Consensus 189 ------------~~~-----~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 189 ------------ANK-----VAQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp ------------SCH-----HHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ------------cch-----HHHHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 000 112233343589998 689999975 3677778775 675 78999999999853
No 245
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.48 E-value=5.3e-05 Score=85.23 Aligned_cols=34 Identities=32% Similarity=0.470 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLG-AKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G-~kV~LlE~~ 109 (699)
..+||+|||||++|++||+.|++.| .+|+|+|+.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~ 41 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEAR 41 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 3589999999999999999999999 999999986
No 246
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.48 E-value=7.6e-05 Score=83.11 Aligned_cols=35 Identities=31% Similarity=0.483 Sum_probs=32.6
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+..+||+|||||++|++||+.|++.|++|+|+|+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~ 43 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEAR 43 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecc
Confidence 34589999999999999999999999999999996
No 247
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.48 E-value=7.1e-05 Score=81.43 Aligned_cols=35 Identities=31% Similarity=0.506 Sum_probs=32.6
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
...+||+|||||++|+++|+.|++.|.+|+|+|++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~ 61 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRR 61 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEecc
Confidence 34699999999999999999999999999999984
No 248
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.45 E-value=0.00017 Score=75.36 Aligned_cols=90 Identities=21% Similarity=0.275 Sum_probs=66.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..|++.|.+|+++++. +...
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~----------~~~~---------------------------------- 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYM----------PKYM---------------------------------- 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSS----------SSCC----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcC----------CccC----------------------------------
Confidence 36999999999999999999999999999973 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Ccc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FGM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG~--~i~Ad~VVlAtG~~ 230 (699)
.+. .+.+.+.+ .|++++ ++.|+++..+ ++++.+|.+. +|+ ++.+|.||+|+|..
T Consensus 192 ------------~~~-----~l~~~l~~-~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 192 ------------CEN-----AYVQEIKK-RNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ------------SCH-----HHHHHHHH-TTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred ------------CCH-----HHHHHHhc-CCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 000 12223334 388887 6899999865 4557778775 665 68999999999853
No 249
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.43 E-value=8.1e-05 Score=83.01 Aligned_cols=56 Identities=23% Similarity=0.166 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 174 EYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 174 ~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.+.+.|.+.+.+.++++++ +++|++|..+ ++. +.|++.+|.++.||.||+|+|...
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~-v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDA-ARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSS-EEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCE-EEEEECCCCEEEcCEEEECCCHHH
Confidence 4556677777776338887 7999999875 344 568888888899999999999864
No 250
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.43 E-value=0.00029 Score=72.83 Aligned_cols=91 Identities=21% Similarity=0.287 Sum_probs=67.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+.+|..|++.|.+|+++++. +..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~----------~~~----------------------------------- 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRR----------DEF----------------------------------- 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSS----------SSC-----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeC----------CCC-----------------------------------
Confidence 46999999999999999999999999999973 000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc--Ccc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF--FGM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~--dG~--~i~Ad~VVlAtG~~ 230 (699)
..+.. .+.+.+++ .|++++ ++.|+++..+ ++++.+|++. +|+ ++.+|.||+|+|..
T Consensus 183 -----------~~~~~----~~~~~~~~-~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 183 -----------RAAPS----TVEKVKKN-EKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp -----------BSCHH----HHHHHHHC-TTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred -----------CCCHH----HHHHHHhc-CCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 00111 11222234 499998 7999999865 5677788776 775 78999999999953
No 251
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.40 E-value=9.4e-05 Score=81.37 Aligned_cols=34 Identities=29% Similarity=0.400 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.++||+|||||++|++||+.|++.|.+|+|+|++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~ 37 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEAR 37 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 3589999999999999999999999999999985
No 252
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.39 E-value=8.5e-05 Score=82.32 Aligned_cols=34 Identities=32% Similarity=0.466 Sum_probs=31.2
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|++||+.|++.|.+|+|+|++
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~ 48 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESS 48 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcC
Confidence 3589999999999999999999999999999996
No 253
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.39 E-value=0.00012 Score=78.92 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|++||+.|++.|++|+|+|++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4579999999999999999999999999999984
No 254
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.38 E-value=0.00038 Score=76.67 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=66.5
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.|+|||||..|++.|..+++.|.+|+|+|+. +.+..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----------~~ll~---------------------------------- 184 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRS----------DKINK---------------------------------- 184 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESS----------SCCST----------------------------------
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeee----------ccccc----------------------------------
Confidence 6999999999999999999999999999983 10000
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..|. .+...+.+.+++. |++++ ++.|+++. .. .|.+.+|+++.+|.||+|+|..
T Consensus 185 ----------~~d~-~~~~~~~~~l~~~-gV~i~~~~~v~~~~---~~---~v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 185 ----------LMDA-DMNQPILDELDKR-EIPYRLNEEINAIN---GN---EITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp ----------TSCG-GGGHHHHHHHHHT-TCCEEESCCEEEEE---TT---EEEETTSCEEECSEEEECCCEE
T ss_pred ----------cccc-hhHHHHHHHhhcc-ceEEEeccEEEEec---CC---eeeecCCeEEeeeeEEEEecee
Confidence 0000 1223445556665 88887 68888875 22 3778899999999999999963
No 255
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.37 E-value=9e-05 Score=79.72 Aligned_cols=32 Identities=31% Similarity=0.499 Sum_probs=31.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+||+|||||++|+++|+.|++.|.+|+|+|++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~ 33 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKR 33 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecC
Confidence 79999999999999999999999999999985
No 256
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.36 E-value=0.00087 Score=74.73 Aligned_cols=94 Identities=17% Similarity=0.078 Sum_probs=67.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.|+|||||..|++.|..+++.|.+|+++++. ....
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~----------~~l~----------------------------------- 221 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRS----------IPLR----------------------------------- 221 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS----------CSST-----------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcC----------cccc-----------------------------------
Confidence 5999999999999999999999999999972 0000
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---cc--EEecCeEEEecCCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF---GM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G~--~i~Ad~VVlAtG~~ 230 (699)
..|+ .+...+.+.+++. |++++ ++.|+++... ++....|.+.+ |+ ++.+|.||+|+|..
T Consensus 222 ----------~~d~-~~~~~l~~~l~~~-gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 222 ----------GFDQ-QMSSLVTEHMESH-GTQFLKGCVPSHIKKL-PTNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp ----------TSCH-HHHHHHHHHHHHT-TCEEEETEEEEEEEEC-TTSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred ----------cCCH-HHHHHHHHHHHHC-CCEEEeCCEEEEEEEc-CCCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 0111 3445566667775 89987 5889998764 23333455543 54 57899999999953
No 257
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.36 E-value=0.00014 Score=80.08 Aligned_cols=55 Identities=16% Similarity=0.115 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCCC
Q 048823 174 EYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTFM 231 (699)
Q Consensus 174 ~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~~ 231 (699)
.+.+.|.+.+++. |++++ +++|++|..+ ++++++|.+ +|+++.||.||+|+|.+.
T Consensus 235 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~-~~~v~~v~~-~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 235 ELPQGFARLSAIY-GGTYMLNKPVDDIIME-NGKVVGVKS-EGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHHHHHHHHHHH-TCCCBCSCCCCEEEEE-TTEEEEEEE-TTEEEECSEEEECGGGCG
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEe-CCEEEEEEE-CCeEEECCEEEECCCCCc
Confidence 5667777777776 56665 7999999876 678888775 677899999999999984
No 258
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.35 E-value=0.00011 Score=82.12 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|++||+.|++.|++|+|+|++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~ 45 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAE 45 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeC
Confidence 4589999999999999999999999999999996
No 259
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.34 E-value=0.00093 Score=69.15 Aligned_cols=90 Identities=20% Similarity=0.199 Sum_probs=67.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+.+|..|++.|.+|+++++. +...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~----------~~~~---------------------------------- 190 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRR----------DTFK---------------------------------- 190 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSS----------SSCC----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeC----------CCCC----------------------------------
Confidence 46999999999999999999999999999973 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---cc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF---GM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G~--~i~Ad~VVlAtG~~ 230 (699)
.+. .+.+.+.+..|++++ ++.|+++..+ +++.+|++.+ |+ ++.+|.||+|+|..
T Consensus 191 ------------~~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 191 ------------AQP-----IYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp ------------SCH-----HHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ------------cCH-----HHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 000 112233344589998 5889999753 6777788776 76 78999999999964
No 260
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.33 E-value=0.00043 Score=72.50 Aligned_cols=91 Identities=16% Similarity=0.230 Sum_probs=65.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+.+|..|++.|.+|+++++. +...
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~----------~~~~---------------------------------- 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRR----------DAFR---------------------------------- 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSS----------SSCC----------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecC----------CcCC----------------------------------
Confidence 46999999999999999999999999999983 1000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCC--CEEEEEEc---Cc--cEEecCeEEEecCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKND--NVEGVCTF---FG--MNFYAPSVVLTTGT 229 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g--~v~gV~t~---dG--~~i~Ad~VVlAtG~ 229 (699)
.. ..+.+.+.+..|++++ ++.|+++..+ ++ ++.+|.+. +| .++.+|.||+|+|.
T Consensus 196 ------------~~-----~~~~~~~~~~~gv~i~~~~~v~~i~~~-~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 196 ------------AS-----KIMQQRALSNPKIDVIWNSSVVEAYGD-GERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp ------------SC-----HHHHHHHHTCTTEEEECSEEEEEEEES-SSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ------------cc-----HHHHHHHHhCCCeeEecCCceEEEeCC-CCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 00 0112222223489998 6899999765 33 67667765 45 47899999999996
Q ss_pred C
Q 048823 230 F 230 (699)
Q Consensus 230 ~ 230 (699)
.
T Consensus 258 ~ 258 (333)
T 1vdc_A 258 E 258 (333)
T ss_dssp E
T ss_pred c
Confidence 4
No 261
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.32 E-value=0.00081 Score=75.74 Aligned_cols=91 Identities=26% Similarity=0.341 Sum_probs=67.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|+++|..|++.|.+|+++++. +...
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~----------~~l~---------------------------------- 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFA----------PEMK---------------------------------- 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSS----------SSCC----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeC----------cccC----------------------------------
Confidence 46999999999999999999999999999973 0000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC---cc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF---GM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d---G~--~i~Ad~VVlAtG~~ 230 (699)
.+ ..+.+.+.+.+|++++ ++.|+++..+ ++++.+|.+.+ |+ ++.+|.||+|+|..
T Consensus 392 ------------~~-----~~l~~~l~~~~gV~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 392 ------------AD-----QVLQDKVRSLKNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp ------------SC-----HHHHHHHTTCTTEEEECSEEEEEEEEC-SSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ------------cC-----HHHHHHHhcCCCcEEEeCCEEEEEEcC-CCcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 00 1123345454689998 6899999764 56787887764 53 68999999999953
No 262
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.31 E-value=0.00083 Score=71.29 Aligned_cols=102 Identities=24% Similarity=0.322 Sum_probs=68.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.|+|||||..|+++|..|++.|.+|+++++... ... .. .+
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~----------~~~-------~~-----------~d------------ 207 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG----------LND-------PD-----------AD------------ 207 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------------------
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC----------CCC-------CC-----------CC------------
Confidence 699999999999999999999999999998310 000 00 00
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEe-cCeEEEecCCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFY-APSVVLTTGTF 230 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~-Ad~VVlAtG~~ 230 (699)
+.. ... ..+.+.+.+.+++.++++++ ++.|+++..+ +....|.+.+|+.+. +|.||+|+|..
T Consensus 208 --~~~-----~~~-~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~--~~~~~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 208 --PSV-----RLS-PYTRQRLGNVIKQGARIEMNVHYTVKDIDFN--NGQYHISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp --CTT-----SCC-HHHHHHHHHHHHTTCCEEEECSCCEEEEEEE--TTEEEEEESSSCCEEESSCCEECCCBC
T ss_pred --CCc-----cCC-HHHHHHHHHHHhhCCcEEEecCcEEEEEEec--CCceEEEecCCeEeccCCceEEeeccC
Confidence 000 011 13445566666665239998 5889988643 234567788887665 59999999964
No 263
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.21 E-value=0.00093 Score=73.58 Aligned_cols=93 Identities=26% Similarity=0.317 Sum_probs=67.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
+|+|||||..|+++|..+++.|.+|+++++. +... ..
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~----------~~~l------------------~~--------------- 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRG----------ERVL------------------RR--------------- 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS----------SSTT------------------TT---------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcC----------Cccc------------------hh---------------
Confidence 7999999999999999999999999999983 0000 00
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..++ .+...+.+.+++. ++++ ++.|+++..+ +++..+ ..+|.++.+|.||+|+|..
T Consensus 187 ----------~~~~-~~~~~l~~~l~~~--v~i~~~~~v~~i~~~--~~v~~v-~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 187 ----------SFDK-EVTDILEEKLKKH--VNLRLQEITMKIEGE--ERVEKV-VTDAGEYKAELVILATGIK 243 (449)
T ss_dssp ----------TSCH-HHHHHHHHHHTTT--SEEEESCCEEEEECS--SSCCEE-EETTEEEECSEEEECSCEE
T ss_pred ----------hcCH-HHHHHHHHHHHhC--cEEEeCCeEEEEecc--CcEEEE-EeCCCEEECCEEEEeeCCc
Confidence 0121 3455566666664 8876 6889988743 355445 4466789999999999965
No 264
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.20 E-value=0.0012 Score=74.83 Aligned_cols=32 Identities=19% Similarity=0.135 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||+|..|+.+|..|++.|.+|+++++.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~ 210 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRT 210 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESS
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECC
Confidence 46999999999999999999999999999985
No 265
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.19 E-value=0.00034 Score=71.69 Aligned_cols=84 Identities=13% Similarity=0.115 Sum_probs=64.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+++|..|++.| +|+++++.. .
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~----------~------------------------------------ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI----------V------------------------------------ 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT----------C------------------------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCC----------C------------------------------------
Confidence 46999999999999999999999 999998620 0
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
..+ ..+.+.+.+. |++++.+.|+++..+ + .|.+.+|+++.+|.||+|+|..
T Consensus 175 -----------~~~-----~~~~~~l~~~-gv~i~~~~v~~i~~~--~---~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 175 -----------EPD-----ADQHALLAAR-GVRVETTRIREIAGH--A---DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp -----------CCC-----HHHHHHHHHT-TCEEECSCEEEEETT--E---EEEETTSCEEEESEEEECCEEE
T ss_pred -----------CCC-----HHHHHHHHHC-CcEEEcceeeeeecC--C---eEEeCCCCEEEEEEEEEccCcc
Confidence 000 1123345554 899988888888632 2 6888999999999999999964
No 266
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.18 E-value=0.00024 Score=79.17 Aligned_cols=34 Identities=32% Similarity=0.438 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|+++|+.|++.|.+|+|+|+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~ 65 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEAS 65 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3579999999999999999999999999999986
No 267
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.14 E-value=0.0003 Score=78.03 Aligned_cols=34 Identities=26% Similarity=0.224 Sum_probs=31.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||+||+++|+.|++.|++|+|+|+.
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~ 154 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRY 154 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence 4589999999999999999999999999999984
No 268
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.14 E-value=0.00027 Score=76.47 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=31.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
++||+|||||++|+++|+.|++.|++|+|+|++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEec
Confidence 479999999999999999999999999999985
No 269
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.13 E-value=0.00032 Score=78.38 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.8
Q ss_pred CcccEEEECCChHHHHHHHHHHHcC-CceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLG-AKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G-~kV~LlE~~ 109 (699)
..+||+|||||++|+++|+.|++.| .+|+|+|+.
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~ 42 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECN 42 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCC
Confidence 4589999999999999999999999 799999996
No 270
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.13 E-value=0.00013 Score=82.68 Aligned_cols=33 Identities=33% Similarity=0.640 Sum_probs=31.6
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+||+||||||.||+.+|..|++ |.+|+|||++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG 57 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERG 57 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSS
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecC
Confidence 46999999999999999999999 9999999997
No 271
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.06 E-value=0.00051 Score=72.31 Aligned_cols=89 Identities=18% Similarity=0.211 Sum_probs=63.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|++.|..|++.|.+|+++++. +... .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~----------~~~~-----------------~---------------- 192 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRR----------DEFR-----------------A---------------- 192 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSS----------SSCS-----------------S----------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcC----------CcCC-----------------c----------------
Confidence 46999999999999999999999999999973 0000 0
Q ss_pred CCCccccccccccCHHHHHHHHH-HHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc---Cc--cEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMK-NIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF---FG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~-~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~---dG--~~i~Ad~VVlAtG~~ 230 (699)
. . .+. +.+++ .|++++ ++.|+++..+ +++.+|.+. +| .++.+|.||+|+|..
T Consensus 193 --~--------~--------~~~~~~~~~-~gV~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 193 --S--------K--------IMLDRARNN-DKIRFLTNHTVVAVDGD--TTVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp --C--------T--------THHHHHHHC-TTEEEECSEEEEEEECS--SSCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred --c--------H--------HHHHHHhcc-CCcEEEeCceeEEEecC--CcEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 0 0 011 12233 489998 6899999753 455556654 45 478999999999963
No 272
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.04 E-value=0.0032 Score=71.96 Aligned_cols=30 Identities=23% Similarity=0.299 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|+|||||..|+++|..|++.|.+|+|+++
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 317 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVR 317 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEEC
Confidence 599999999999999999999999999997
No 273
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.96 E-value=0.0016 Score=72.07 Aligned_cols=93 Identities=25% Similarity=0.319 Sum_probs=64.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||||..|++.|..+++.|.+|+++++. +... .
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~----------~~~l------------------~--------------- 209 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEML----------DRAL------------------I--------------- 209 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSS----------SSSC------------------T---------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeC----------CcCC------------------C---------------
Confidence 35999999999999999999999999999973 0000 0
Q ss_pred CCCcccccccccc-CHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEc--Ccc--EEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQT-DKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTF--FGM--NFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~-d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~--dG~--~i~Ad~VVlAtG~~ 230 (699)
.. +. .+...+.+.+. ++++ ++.|+++..++++.+ .|.+. +|+ ++.+|.||+|+|..
T Consensus 210 -----------~~~d~-~~~~~l~~~l~----v~i~~~~~v~~i~~~~~~~v-~v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 210 -----------TLEDQ-DIVNTLLSILK----LNIKFNSPVTEVKKIKDDEY-EVIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp -----------TSCCH-HHHHHHHHHHC----CCEECSCCEEEEEEEETTEE-EEEECCTTSCCEEEEESCEEECCCEE
T ss_pred -----------CCCCH-HHHHHHHhcCE----EEEEECCEEEEEEEcCCCcE-EEEEEecCCceEEEEcCEEEECcCCC
Confidence 00 11 23333444332 7776 588998876421443 46666 676 79999999999964
No 274
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.88 E-value=0.0019 Score=66.77 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=34.6
Q ss_pred cccccCCCCCEEEecccCCCch--HHHHHHHHHHHHHHHHHHhc
Q 048823 400 RSLMTKKVEGLFFSGQINGTTG--YEEAAAQGIISGINAARHSD 441 (699)
Q Consensus 400 ~~letk~i~gLf~AGqi~G~~G--y~eA~a~G~~Ag~naa~~~~ 441 (699)
..++|. +||+|+|||+++..+ ...|+++|.+||.||.++++
T Consensus 270 ~~~~Ts-~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 270 EGPKTS-VDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp BTTBCS-STTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccC-CCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 456774 999999999988643 57899999999999999875
No 275
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.87 E-value=0.00064 Score=75.36 Aligned_cols=34 Identities=35% Similarity=0.410 Sum_probs=30.9
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..+||+|||||++|+++|+.|++.|. +|+|+|++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~ 37 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEAT 37 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCC
Confidence 35899999999999999999999998 89999986
No 276
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.87 E-value=0.00073 Score=76.61 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||+|..|+.+|..|++.|.+|+|+++.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~ 217 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRT 217 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESS
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcC
Confidence 46999999999999999999999999999985
No 277
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.86 E-value=0.00052 Score=74.27 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||||..|+++|..|++.|.+|+|+|+.
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~ 178 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIIL 178 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcC
Confidence 36999999999999999999999999999983
No 278
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.86 E-value=0.005 Score=68.19 Aligned_cols=42 Identities=21% Similarity=0.343 Sum_probs=33.2
Q ss_pred ccccCCCCCEEEecccC-CCch-HHHHHHHHHHHHHHHHHHhcC
Q 048823 401 SLMTKKVEGLFFSGQIN-GTTG-YEEAAAQGIISGINAARHSDG 442 (699)
Q Consensus 401 ~letk~i~gLf~AGqi~-G~~G-y~eA~a~G~~Ag~naa~~~~~ 442 (699)
.+++..+||+|++||+. |..| +..|..+|..||.|++..+.+
T Consensus 353 ~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 353 EGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp TTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 34454479999999987 5676 568999999999999887644
No 279
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.86 E-value=0.00072 Score=79.42 Aligned_cols=44 Identities=9% Similarity=0.110 Sum_probs=36.2
Q ss_pred CcccccCCCCCEEEecccCCCchHHHHHHHHHHHHHHHHHHhcCC
Q 048823 399 YRSLMTKKVEGLFFSGQINGTTGYEEAAAQGIISGINAARHSDGK 443 (699)
Q Consensus 399 ~~~letk~i~gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~~~~ 443 (699)
+..++| .+||+|++||+.+..-...|..||..||.|+..++.+.
T Consensus 659 d~~~~t-~~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l~~~ 702 (729)
T 1o94_A 659 SEWAEN-DIKGIYLIGDAEAPRLIADATFTGHRVAREIEEANPQI 702 (729)
T ss_dssp GGTGGG-TCCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSCTTS
T ss_pred cccccc-CCCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhcccC
Confidence 456777 48999999999998777889999999999987765443
No 280
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.83 E-value=0.0038 Score=69.68 Aligned_cols=35 Identities=11% Similarity=0.181 Sum_probs=32.1
Q ss_pred CCCCEEEecccCCCchHHHHHHHHHHHHHHHHHHh
Q 048823 406 KVEGLFFSGQINGTTGYEEAAAQGIISGINAARHS 440 (699)
Q Consensus 406 ~i~gLf~AGqi~G~~Gy~eA~a~G~~Ag~naa~~~ 440 (699)
.+||+|++||+.+......|..||.+||.|++..+
T Consensus 342 s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 342 IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 47999999999999888899999999999999875
No 281
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.82 E-value=0.0011 Score=76.04 Aligned_cols=51 Identities=29% Similarity=0.369 Sum_probs=41.2
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHH
Q 048823 74 IDERFDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEV 134 (699)
Q Consensus 74 ~~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el 134 (699)
++.+|||+|||+|..|+..|..|++.|.+|++||++ +..||........++
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~----------~~~gg~~~~~~l~~l 55 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSR----------SYYGGNWASFSFSGL 55 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS----------SSSCGGGCEECHHHH
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCC----------CcccCccccccHHHH
Confidence 345799999999999999999999999999999994 667776544333333
No 282
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=96.78 E-value=0.0013 Score=68.35 Aligned_cols=89 Identities=10% Similarity=0.160 Sum_probs=64.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhcc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNT 157 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~ 157 (699)
-.|+|||+|..|+.+|..|++.|.+|+++++. +....
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~----------~~~~~--------------------------------- 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRR----------DKFRA--------------------------------- 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSS----------SSCSS---------------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEec----------CcCCc---------------------------------
Confidence 46999999999999999999999999999973 00000
Q ss_pred CCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC-----ccEEecCeEEEecCCC
Q 048823 158 SRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF-----GMNFYAPSVVLTTGTF 230 (699)
Q Consensus 158 s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d-----G~~i~Ad~VVlAtG~~ 230 (699)
.+ .. .+.+++. |++++ ++.|+++..+ +.+.+|.+.+ +.++.+|.||+|+|..
T Consensus 192 ------------~~--~~----~~~l~~~-gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 192 ------------HE--HS----VENLHAS-KVNVLTPFVPAELIGE--DKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp ------------CH--HH----HHHHHHS-SCEEETTEEEEEEECS--SSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred ------------cH--HH----HHHHhcC-CeEEEeCceeeEEecC--CceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 00 00 1123444 89998 5899999754 3466677665 4579999999999953
No 283
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.70 E-value=0.0052 Score=69.62 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=30.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||+|..|+.+|..|++.|.+|+++++.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~ 223 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRS 223 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESS
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECC
Confidence 46999999999999999999999999999985
No 284
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.68 E-value=0.0011 Score=74.29 Aligned_cols=35 Identities=29% Similarity=0.517 Sum_probs=32.9
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+||||+|.+|+.+|..|++.|.+|+|||++
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 43 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMG 43 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 35699999999999999999999999999999987
No 285
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.67 E-value=0.001 Score=74.57 Aligned_cols=54 Identities=19% Similarity=0.097 Sum_probs=41.1
Q ss_pred HHHHccCCeEEE-eeEEEEEEecCCC-CEEEEEEc--Cc-----cEEecCeEEEecCCCCCCc
Q 048823 181 NIVESTANLCIR-EAMVTDILLGKND-NVEGVCTF--FG-----MNFYAPSVVLTTGTFMSGK 234 (699)
Q Consensus 181 ~~l~~~~gv~i~-~~~V~~l~~e~~g-~v~gV~t~--dG-----~~i~Ad~VVlAtG~~~~~~ 234 (699)
..+.+.+|++++ ++.|++|+.++++ +++||++. +| .++.|+.||+|+|++...+
T Consensus 229 ~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~ 291 (504)
T 1n4w_A 229 AAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTE 291 (504)
T ss_dssp HHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHH
T ss_pred HHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHH
Confidence 444556689997 6999999987434 79999875 56 3789999999999985433
No 286
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.65 E-value=0.0013 Score=76.23 Aligned_cols=34 Identities=29% Similarity=0.410 Sum_probs=32.1
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~ 139 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 139 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecC
Confidence 4589999999999999999999999999999985
No 287
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.60 E-value=0.0045 Score=74.88 Aligned_cols=86 Identities=13% Similarity=0.158 Sum_probs=64.5
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhccC
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLNTS 158 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~~s 158 (699)
.|+|||||..|+++|..|++.|.+|+|+|+. +.. +
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~----------~~~------------------~----------------- 320 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDAR----------SSI------------------S----------------- 320 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESC----------SSC------------------C-----------------
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECC----------Ccc------------------c-----------------
Confidence 5999999999999999999999999999973 000 0
Q ss_pred CCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC-------c--cEEecCeEEEecC
Q 048823 159 RGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF-------G--MNFYAPSVVLTTG 228 (699)
Q Consensus 159 ~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d-------G--~~i~Ad~VVlAtG 228 (699)
.. .+.+++. ||.++ ++.|+++..++++++.+|++.+ | .++.+|.||+|+|
T Consensus 321 -------------~~------~~~l~~~-GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G 380 (965)
T 2gag_A 321 -------------AA------AAQAVAD-GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGG 380 (965)
T ss_dssp -------------HH------HHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECC
T ss_pred -------------hh------HHHHHhC-CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCC
Confidence 00 1234444 88887 5889998752136677777664 5 5899999999999
Q ss_pred C
Q 048823 229 T 229 (699)
Q Consensus 229 ~ 229 (699)
-
T Consensus 381 ~ 381 (965)
T 2gag_A 381 F 381 (965)
T ss_dssp E
T ss_pred c
Confidence 5
No 288
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.58 E-value=0.0048 Score=68.28 Aligned_cols=32 Identities=22% Similarity=0.308 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||||..|+..|..|++.|.+|+|+++.
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~ 229 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYR 229 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEEC
Confidence 46999999999999999999999999999973
No 289
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.53 E-value=0.0019 Score=76.70 Aligned_cols=34 Identities=29% Similarity=0.410 Sum_probs=32.0
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+||+|||||++|+++|+.|++.|++|+|+|+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~ 310 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEAR 310 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEec
Confidence 4579999999999999999999999999999985
No 290
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.41 E-value=0.0049 Score=67.73 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCc-eeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAK-TLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~k-V~LlE~ 108 (699)
-+|+|||||..|+..|..|++.|.+ |+|+++
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r 244 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLL 244 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECT
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeC
Confidence 4699999999999999999999999 999997
No 291
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.41 E-value=0.0068 Score=66.99 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=27.9
Q ss_pred ccEEEECCChHHHHHHHHHHHc--------------------CC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARL--------------------GA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--------------------G~-kV~LlE~~ 109 (699)
-.|+|||+|..|+.+|..|++. |. +|+|+++.
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~ 200 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRR 200 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecC
Confidence 3699999999999999999974 64 89999984
No 292
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.27 E-value=0.0023 Score=70.88 Aligned_cols=33 Identities=24% Similarity=0.211 Sum_probs=31.0
Q ss_pred cccEEEECCChHHHHHHHHHHHcC--CceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLG--AKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G--~kV~LlE~~ 109 (699)
.+||+|||||++|+++|..|++.| .+|+|+|+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~ 40 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQ 40 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 479999999999999999999999 999999984
No 293
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.16 E-value=0.0041 Score=65.13 Aligned_cols=37 Identities=11% Similarity=0.088 Sum_probs=30.7
Q ss_pred CCCCEEEec--ccCC--CchHHHHHHHHHHHHHHHHHHhcC
Q 048823 406 KVEGLFFSG--QING--TTGYEEAAAQGIISGINAARHSDG 442 (699)
Q Consensus 406 ~i~gLf~AG--qi~G--~~Gy~eA~a~G~~Ag~naa~~~~~ 442 (699)
.+||+|++| |+.+ ......|..+|..||.|+++.+.|
T Consensus 313 ~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g 353 (357)
T 4a9w_A 313 AVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCAD 353 (357)
T ss_dssp SCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC-
T ss_pred CCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHh
Confidence 589999999 7775 244567999999999999999988
No 294
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.14 E-value=0.0052 Score=72.11 Aligned_cols=31 Identities=13% Similarity=0.047 Sum_probs=29.3
Q ss_pred ccEEEEC--CChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVG--GGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIG--gG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
-.|+||| ||..|+++|..|++.|.+|+|+++
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~ 561 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSG 561 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEES
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEec
Confidence 3699999 999999999999999999999998
No 295
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.07 E-value=0.0065 Score=62.85 Aligned_cols=88 Identities=7% Similarity=0.050 Sum_probs=63.6
Q ss_pred ccEEEECCCh-HHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhhc
Q 048823 78 FDVIVVGGGH-AGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVLN 156 (699)
Q Consensus 78 ~DVvVIGgG~-AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~~ 156 (699)
-.++|||||. +++++|..+++.|.+|+++++. ..
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~----------~~----------------------------------- 181 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNG----------NE----------------------------------- 181 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSS----------CC-----------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEecc----------cc-----------------------------------
Confidence 3578888775 5788999999999999998762 00
Q ss_pred cCCCccccccccccCHHHHHHHHHHHHHccCCeEEEeeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 157 TSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIREAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 157 ~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.. ..+.+.+.+. ++.++...++.+..+ ++++.+|++.+|+++.++.+|+++|+.
T Consensus 182 -------------~~-----~~~~~~l~~~-g~~~~~~~v~~~~~~-~~~~~~v~~~~g~~i~~~~~vi~~g~~ 235 (304)
T 4fk1_A 182 -------------LS-----QTIMDELSNK-NIPVITESIRTLQGE-GGYLKKVEFHSGLRIERAGGFIVPTFF 235 (304)
T ss_dssp -------------CC-----HHHHHHHHTT-TCCEECSCEEEEESG-GGCCCEEEETTSCEECCCEEEECCEEE
T ss_pred -------------ch-----hhhhhhhhcc-ceeEeeeeEEEeecC-CCeeeeeeccccceeeecceeeeeccc
Confidence 00 0122334444 777776667777655 678889999999999999999999875
No 296
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.73 E-value=0.0041 Score=72.25 Aligned_cols=50 Identities=10% Similarity=0.114 Sum_probs=37.5
Q ss_pred CCCEEEecccC-CCchHH-HHHHHHHHHHHHHHHHhcCCCCccCCc--cchhHH
Q 048823 407 VEGLFFSGQIN-GTTGYE-EAAAQGIISGINAARHSDGKSLIVLER--ESSYVG 456 (699)
Q Consensus 407 i~gLf~AGqi~-G~~Gy~-eA~a~G~~Ag~naa~~~~~~~~~~~~r--~~~~ig 456 (699)
.-+|||||+-. ..+|+. .|+.+|+.|+.++...+.+.++..|+- .+-|+|
T Consensus 644 ~gri~fAGe~~S~~~GWieGAl~Sa~~Aa~~i~~~~~~~~~~~~~~~~~~~~~~ 697 (721)
T 3ayj_A 644 DNRFFIASDSYSHLGGWLEGAFMSALNAVAGLIVRANRGDVSALSTEARPLVIG 697 (721)
T ss_dssp CCCEEECSGGGSSCTTSHHHHHHHHHHHHHHHHHHHTTTCGGGBCTTTTHHHHT
T ss_pred CCCEEEeehhhccCCceehHHHHHHHHHHHHHHHHhcCCCCcccCccchhcccc
Confidence 47899999954 668875 588899999999999888876544443 233666
No 297
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.26 E-value=0.028 Score=65.19 Aligned_cols=28 Identities=25% Similarity=0.370 Sum_probs=25.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeE
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLL 105 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~L 105 (699)
-.|+|||||..|+++|..|++.|.+|++
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 4699999999999999999999988765
No 298
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.13 E-value=0.078 Score=59.11 Aligned_cols=31 Identities=19% Similarity=0.374 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
.|+|||+|-+|+..|..|++. +.+|.++-+.
T Consensus 248 rV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~ 280 (501)
T 4b63_A 248 NIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRD 280 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSTTCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCceEEEEeCC
Confidence 599999999999999999986 6789999884
No 299
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=94.72 E-value=0.077 Score=57.19 Aligned_cols=50 Identities=10% Similarity=0.022 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 174 EYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 174 ~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+...+.+.+++. ||+++ ++.|+++.. + +|++.+|+++.+|.||+|+|..
T Consensus 219 ~~~~~~~~~l~~~-gV~~~~~~~v~~i~~---~---~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 219 NSRKAVASIYNQL-GIKLVHNFKIKEIRE---H---EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHH-TCEEECSCCEEEECS---S---EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHC-CCEEEcCCceEEECC---C---eEEECCCCEEeeeEEEECCCCC
Confidence 3555666667775 89998 588998852 2 3788899999999999999964
No 300
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=94.26 E-value=0.25 Score=55.50 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||+|..|+..|..+++.|.+|+++++.
T Consensus 187 k~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~ 218 (542)
T 1w4x_A 187 QRVGVIGTGSSGIQVSPQIAKQAAELFVFQRT 218 (542)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESS
T ss_pred CEEEEECCCccHHHHHHHHhhcCceEEEEEcC
Confidence 46999999999999999999999999999984
No 301
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=93.81 E-value=0.15 Score=55.65 Aligned_cols=49 Identities=12% Similarity=-0.041 Sum_probs=40.1
Q ss_pred CcccccCCCCCEEEecccCCCch-------------HHHHHHHHHHHHHHHHHHhcCCCCcc
Q 048823 399 YRSLMTKKVEGLFFSGQINGTTG-------------YEEAAAQGIISGINAARHSDGKSLIV 447 (699)
Q Consensus 399 ~~~letk~i~gLf~AGqi~G~~G-------------y~eA~a~G~~Ag~naa~~~~~~~~~~ 447 (699)
+++|++++.||+|++||+.+..+ -..|..||.+||.|+++.+.|+++..
T Consensus 289 d~~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~~~~ 350 (437)
T 3sx6_A 289 DEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQ 350 (437)
T ss_dssp CTTSBBSSCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSCCCC
T ss_pred ChhccCCCCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 35677777999999999987532 45799999999999999999987543
No 302
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=93.55 E-value=0.11 Score=56.38 Aligned_cols=48 Identities=13% Similarity=-0.026 Sum_probs=34.8
Q ss_pred HHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcC----ccEEecCeEEEecCCC
Q 048823 176 AMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFF----GMNFYAPSVVLTTGTF 230 (699)
Q Consensus 176 ~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~d----G~~i~Ad~VVlAtG~~ 230 (699)
...+.+.+++. ||+++ ++.|+++.. +. +++.+ |.++.+|.||+|+|..
T Consensus 203 ~~~l~~~l~~~-GV~i~~~~~v~~v~~---~~---v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 203 KRLVEDLFAER-NIDWIANVAVKAIEP---DK---VIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECS---SE---EEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHC-CCEEEeCCEEEEEeC---Ce---EEEEecCCCceEEeeeEEEECCCCc
Confidence 34555666665 99997 699998852 22 44444 6789999999999964
No 303
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=93.45 E-value=0.039 Score=56.96 Aligned_cols=31 Identities=19% Similarity=0.420 Sum_probs=29.5
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|||||..|+++|..|++.|.+|+|+|+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 177 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRR 177 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecc
Confidence 6999999999999999999999999999983
No 304
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.51 E-value=0.11 Score=46.31 Aligned_cols=32 Identities=22% Similarity=0.431 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|+|||+|..|...|..|++.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 35999999999999999999999999999973
No 305
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.33 E-value=0.12 Score=47.76 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||+|..|...|..|.+.|.+|++++++
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 45999999999999999999999999999985
No 306
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.14 E-value=0.14 Score=46.52 Aligned_cols=31 Identities=13% Similarity=0.171 Sum_probs=29.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|||+|..|...|..|.+.|++|+++|++
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5999999999999999999999999999984
No 307
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=92.00 E-value=0.14 Score=46.20 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|+|+|..|...|..|++.|++|+++|++
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 5999999999999999999999999999984
No 308
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=91.06 E-value=0.18 Score=52.13 Aligned_cols=31 Identities=32% Similarity=0.509 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|++++++
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999999999973
No 309
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.90 E-value=0.25 Score=45.34 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|+|+|+|..|...|..|.+.|++|+++|+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 599999999999999999999999999998
No 310
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.61 E-value=0.21 Score=43.06 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHcC-CceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLG-AKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G-~kV~LlE~~ 109 (699)
.|+|+|+|..|...+..|.+.| .+|.+++++
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 5999999999999999999999 899999984
No 311
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=90.27 E-value=0.25 Score=44.16 Aligned_cols=31 Identities=26% Similarity=0.416 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|+|+|..|...|..|.+.|.+|++++++
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999999999999999999999999999974
No 312
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.51 E-value=0.29 Score=46.28 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHc-CCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARL-GAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~-G~kV~LlE~~ 109 (699)
.|+|||+|..|...|..|.+. |++|+++|++
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESC
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECC
Confidence 599999999999999999999 9999999984
No 313
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=88.04 E-value=0.3 Score=49.88 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|+|||||-.|...|..|.+.|++|+|+++.
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~ 45 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPD 45 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCC
Confidence 45999999999999999999999999999985
No 314
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.76 E-value=0.4 Score=50.13 Aligned_cols=31 Identities=32% Similarity=0.450 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|..-|..++..|++|+|+|..
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999999999973
No 315
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=87.59 E-value=0.37 Score=47.73 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
-.|+|||||-+|...|..|.+.|++|+|+++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 4599999999999999999999999999986
No 316
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.34 E-value=0.42 Score=46.62 Aligned_cols=31 Identities=16% Similarity=0.247 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|||+|..|...|..|.+.|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 3899999999999999999999999999984
No 317
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=87.24 E-value=0.43 Score=47.97 Aligned_cols=32 Identities=34% Similarity=0.517 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|..+|..|++.|. +++|+|.+
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 469999999999999999999997 79999974
No 318
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=87.21 E-value=0.59 Score=51.14 Aligned_cols=36 Identities=33% Similarity=0.458 Sum_probs=33.5
Q ss_pred CCCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 74 IDERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 74 ~~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
++.++||||||||++|++||+.|++.|.+|+|+|++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 345699999999999999999999999999999997
No 319
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=87.09 E-value=0.56 Score=52.15 Aligned_cols=34 Identities=26% Similarity=0.443 Sum_probs=32.3
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+||++|||+|++|+.+|..|++.|.+|+|||++
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~ 37 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMG 37 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC
Confidence 3599999999999999999999999999999987
No 320
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.26 E-value=0.6 Score=47.65 Aligned_cols=31 Identities=29% Similarity=0.407 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|+++|++
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4999999999999999999999999999974
No 321
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=86.23 E-value=0.61 Score=51.89 Aligned_cols=53 Identities=19% Similarity=0.149 Sum_probs=40.4
Q ss_pred HHHccCCeEEE-eeEEEEEEecCCC-CEEEEEEc--Cc-----cEEecCeEEEecCCCCCCc
Q 048823 182 IVESTANLCIR-EAMVTDILLGKND-NVEGVCTF--FG-----MNFYAPSVVLTTGTFMSGK 234 (699)
Q Consensus 182 ~l~~~~gv~i~-~~~V~~l~~e~~g-~v~gV~t~--dG-----~~i~Ad~VVlAtG~~~~~~ 234 (699)
.+.+.+|++++ ++.|++|+.++++ +++||++. +| .+++|+.||+|+|++...+
T Consensus 235 ~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~ 296 (507)
T 1coy_A 235 QAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSK 296 (507)
T ss_dssp HHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHH
T ss_pred HHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHH
Confidence 34445689998 6999999987334 69999875 45 3788999999999984433
No 322
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=86.23 E-value=0.67 Score=50.64 Aligned_cols=33 Identities=27% Similarity=0.303 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
...+.|||.|..|+..|..+|+.|++|+.+|.+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did 53 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVN 53 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSC
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECC
Confidence 457999999999999999999999999999973
No 323
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=85.85 E-value=0.51 Score=51.30 Aligned_cols=35 Identities=37% Similarity=0.526 Sum_probs=32.9
Q ss_pred CCcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 75 DERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 75 ~~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+.++||+|||||++|+++|+.|++.|.+|+|+|++
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~ 38 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRN 38 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecC
Confidence 45689999999999999999999999999999986
No 324
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=85.72 E-value=0.68 Score=48.60 Aligned_cols=32 Identities=19% Similarity=0.222 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|.|||+|..|...|..|+..|+ +|+|+|.+
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 469999999999999999999998 99999973
No 325
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=85.48 E-value=0.58 Score=50.43 Aligned_cols=32 Identities=31% Similarity=0.451 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|+|||+|.+|+.+|..|...|++|+++|+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 222 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVR 222 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCC
Confidence 46999999999999999999999999999984
No 326
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=84.46 E-value=0.66 Score=49.61 Aligned_cols=32 Identities=38% Similarity=0.465 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|+|||+|.+|..+|..|...|++|+++|+.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999984
No 327
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=84.41 E-value=0.53 Score=51.42 Aligned_cols=31 Identities=16% Similarity=0.254 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|||.|.+|+++|..|+++|++|++.|..
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~ 37 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTR 37 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECC
Confidence 4999999999999999999999999999974
No 328
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=84.24 E-value=0.35 Score=54.71 Aligned_cols=36 Identities=28% Similarity=0.622 Sum_probs=29.7
Q ss_pred CCCCEEEecccCC-Cch--------HHHHHHHHHHHHHHHHHHhc
Q 048823 406 KVEGLFFSGQING-TTG--------YEEAAAQGIISGINAARHSD 441 (699)
Q Consensus 406 ~i~gLf~AGqi~G-~~G--------y~eA~a~G~~Ag~naa~~~~ 441 (699)
.|||||.||+++| .+| +.+|+..|.+||.+|+.+++
T Consensus 526 ~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~~ 570 (572)
T 1d4d_A 526 PITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFAK 570 (572)
T ss_dssp EEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHhh
Confidence 5999999999874 333 56999999999999998653
No 329
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=84.07 E-value=0.77 Score=49.12 Aligned_cols=33 Identities=27% Similarity=0.376 Sum_probs=30.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
+..|+|+|||.||+.+|..+...|. +|+++|++
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 3579999999999999999999999 99999984
No 330
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.87 E-value=0.83 Score=48.48 Aligned_cols=32 Identities=38% Similarity=0.634 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|+|+|.+|..++..|+..|++|+++++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 45999999999999999999999999999973
No 331
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=83.85 E-value=1.1 Score=47.32 Aligned_cols=33 Identities=36% Similarity=0.508 Sum_probs=30.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeeecc
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLNID 111 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~ 111 (699)
.|+|+|||..|..+|+.+.+.|++|+++|.+.+
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 389999999999999999999999999998643
No 332
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=83.77 E-value=0.78 Score=52.69 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=31.0
Q ss_pred CCCCEEEecccCCC--chH-HHHHHHHHHHHHHHHHHhcC
Q 048823 406 KVEGLFFSGQINGT--TGY-EEAAAQGIISGINAARHSDG 442 (699)
Q Consensus 406 ~i~gLf~AGqi~G~--~Gy-~eA~a~G~~Ag~naa~~~~~ 442 (699)
.|||||.||++.|+ +.| ..|...|++||.+||.++..
T Consensus 430 ~I~GLyAaGe~a~~~~~r~~~~sl~~G~~ag~~aa~~~~~ 469 (643)
T 1jnr_A 430 TVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFILE 469 (643)
T ss_dssp SSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCEEeeeccccccccccchhHHHHHHHHHHHHHHHHhc
Confidence 59999999999886 445 36888899999999998754
No 333
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=83.68 E-value=0.79 Score=47.43 Aligned_cols=31 Identities=29% Similarity=0.495 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|...|..|++.|+ +|+++++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~ 40 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDI 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 359999999999999999999998 9999997
No 334
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=83.63 E-value=0.79 Score=50.70 Aligned_cols=32 Identities=19% Similarity=0.479 Sum_probs=30.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|+..|..|++.|++|++++++
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 56999999999999999999999999999974
No 335
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=83.47 E-value=0.81 Score=47.57 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.|.+|+++++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSR 33 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 599999999999999999999999999998
No 336
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=83.02 E-value=0.94 Score=47.08 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
..|.|||+|..|...|..+++.|+ +|.|+|.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~ 36 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDI 36 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 359999999999999999999998 9999997
No 337
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=82.71 E-value=0.94 Score=47.29 Aligned_cols=31 Identities=32% Similarity=0.450 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|+++|++
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999999999999999999999999999984
No 338
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=82.59 E-value=0.91 Score=48.97 Aligned_cols=32 Identities=34% Similarity=0.402 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|+|||+|.+|+.+|..|...|++|+++|+.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35999999999999999999999999999974
No 339
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=82.56 E-value=0.96 Score=47.39 Aligned_cols=31 Identities=26% Similarity=0.216 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|.|||+|..|...|..|++.|++|+++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeC
Confidence 3599999999999999999999999999987
No 340
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=82.56 E-value=1.1 Score=46.96 Aligned_cols=30 Identities=23% Similarity=0.272 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.|++|.++++
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r 34 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLAR 34 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEEC
Confidence 599999999999999999999999999997
No 341
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=82.48 E-value=0.95 Score=46.63 Aligned_cols=32 Identities=38% Similarity=0.525 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 569999999999999999999997 78999974
No 342
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=82.42 E-value=0.94 Score=46.45 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.|.+|++++++
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEec
Confidence 5999999999999999999999999999983
No 343
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=82.29 E-value=0.98 Score=46.72 Aligned_cols=31 Identities=35% Similarity=0.462 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGA--KTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~ 109 (699)
.|.|||+|..|...|..|+..|+ .|.|+|.+
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~ 34 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRD 34 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 38999999999999999999998 99999973
No 344
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=82.24 E-value=0.99 Score=45.60 Aligned_cols=31 Identities=19% Similarity=0.101 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcC
Confidence 3899999999999999999999999999984
No 345
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=82.20 E-value=0.83 Score=47.30 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.|.+|+++++
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r 33 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLR 33 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEc
Confidence 599999999999999999999999999997
No 346
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=82.05 E-value=0.84 Score=49.97 Aligned_cols=32 Identities=31% Similarity=0.270 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||.|.+|+++|..|+++|++|.+.|.+
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~ 41 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGK 41 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 35999999999999999999999999999973
No 347
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.90 E-value=1.1 Score=47.19 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 35 ~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 469999999999999999999997 68899874
No 348
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=81.89 E-value=1 Score=46.00 Aligned_cols=30 Identities=17% Similarity=0.353 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEEC
Confidence 599999999999999999999999999997
No 349
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.86 E-value=1.1 Score=47.65 Aligned_cols=32 Identities=34% Similarity=0.640 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|+|+|..|..+|..|+..|++|+++++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 45999999999999999999999999999973
No 350
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=81.74 E-value=2.2 Score=48.88 Aligned_cols=56 Identities=11% Similarity=0.173 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHccCCeEEEeeEEEEEEecCC-CCEEEEEEcCccEEecCeEEEecC
Q 048823 173 REYAMRMKNIVESTANLCIREAMVTDILLGKN-DNVEGVCTFFGMNFYAPSVVLTTG 228 (699)
Q Consensus 173 ~~~~~~L~~~l~~~~gv~i~~~~V~~l~~e~~-g~v~gV~t~dG~~i~Ad~VVlAtG 228 (699)
..+.++|.+.++.+++...+++.|..|..+.+ ++++||++.+|+++.||.||....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 46788898989888444444899999988722 889999988899999999988544
No 351
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=81.69 E-value=1 Score=47.08 Aligned_cols=32 Identities=16% Similarity=0.333 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|.|||+|..|...|..++..|+ +|+|+|.+
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~ 47 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDII 47 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 359999999999999999999998 99999973
No 352
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=81.47 E-value=2.2 Score=46.80 Aligned_cols=33 Identities=45% Similarity=0.619 Sum_probs=31.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
++||+|||||++|++||+.|++.|++|+|+|++
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~ 71 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEAR 71 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCC
Confidence 489999999999999999999999999999986
No 353
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.26 E-value=1.1 Score=45.31 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.++|+|+|.+|..+|..|++.|.+|+++.+
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R 150 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNR 150 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEEC
Confidence 599999999999999999999999999987
No 354
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=81.21 E-value=1.1 Score=49.18 Aligned_cols=31 Identities=35% Similarity=0.432 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|+..|..|++.|++|++++++
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECC
Confidence 5999999999999999999999999999984
No 355
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=81.19 E-value=1.1 Score=47.95 Aligned_cols=32 Identities=34% Similarity=0.462 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|+|+|.+|+.+|..|...|++|+++++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~ 204 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVR 204 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999973
No 356
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=81.18 E-value=1.2 Score=47.57 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=30.1
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
+..|+|+|||.+|..+|..|...|. +|+++|+.
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3569999999999999999999998 79999983
No 357
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=81.17 E-value=1.3 Score=46.27 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
..|.|||+|..|...|..++..|+ +|.|+|.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di 36 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDI 36 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 359999999999999999999998 9999996
No 358
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=80.66 E-value=1.2 Score=43.18 Aligned_cols=32 Identities=13% Similarity=0.223 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|...|..|++.|.+|.+++++
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35999999999999999999999999999874
No 359
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=80.36 E-value=1.2 Score=48.62 Aligned_cols=32 Identities=13% Similarity=0.315 Sum_probs=30.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..+.|||.|..|+..|..|++.|++|++++++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~ 40 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKD 40 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57999999999999999999999999999984
No 360
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=80.09 E-value=1.4 Score=47.09 Aligned_cols=32 Identities=41% Similarity=0.655 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||+|..|..+|..|+..|++|+++++.
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 45999999999999999999999999999973
No 361
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.09 E-value=1.1 Score=49.26 Aligned_cols=31 Identities=29% Similarity=0.387 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|+++|++
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~ 69 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESD 69 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECC
Confidence 4999999999999999999999999999973
No 362
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=79.97 E-value=0.61 Score=42.24 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=28.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|+|||+|..|...|..|++.|.+|+++++
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r 52 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGR 52 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcC
Confidence 599999999999999999999999999987
No 363
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=79.87 E-value=1.3 Score=48.64 Aligned_cols=31 Identities=32% Similarity=0.539 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|+++|++
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~ 86 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRN 86 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECc
Confidence 5999999999999999999999999999984
No 364
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=79.57 E-value=1.6 Score=47.23 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|||||.|..|...|..|.+.|++|++||++
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d 36 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHD 36 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4999999999999999999999999999986
No 365
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=79.28 E-value=1.3 Score=44.58 Aligned_cols=32 Identities=31% Similarity=0.369 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|..+|..|++.|. +++|+|.+
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 469999999999999999999997 68899874
No 366
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=78.95 E-value=1.2 Score=48.61 Aligned_cols=31 Identities=16% Similarity=0.230 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|+..|..|++.|++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 3889999999999999999999999999973
No 367
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=78.87 E-value=0.57 Score=51.66 Aligned_cols=46 Identities=20% Similarity=0.343 Sum_probs=29.2
Q ss_pred ccccCcccccCCCCCEEEecccCCC--chH----HHHHHHHHHHHHHHHHHhc
Q 048823 395 AHQCYRSLMTKKVEGLFFSGQINGT--TGY----EEAAAQGIISGINAARHSD 441 (699)
Q Consensus 395 p~~l~~~letk~i~gLf~AGqi~G~--~Gy----~eA~a~G~~Ag~naa~~~~ 441 (699)
-...|..++|. +||||.|||+.++ +|- .-|..+|+++|.+|+..+.
T Consensus 318 GI~vd~~~~t~-ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a 369 (472)
T 2e5v_A 318 GIRVNIRGESN-IVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVD 369 (472)
T ss_dssp EEECCTTCBCS-SBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTT
T ss_pred CeEECCCCccc-cCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHH
Confidence 34577888884 9999999998773 331 2344555555555554443
No 368
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=78.69 E-value=1.6 Score=46.23 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 569999999999999999999997 69999973
No 369
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=78.53 E-value=1.3 Score=49.02 Aligned_cols=32 Identities=31% Similarity=0.202 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHc-CC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARL-GA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~-G~-kV~LlE~~ 109 (699)
..|.|||+|..|+..|..|++. |+ +|++++++
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~ 52 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRN 52 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 3599999999999999999999 99 99999984
No 370
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=78.43 E-value=1.6 Score=45.22 Aligned_cols=30 Identities=30% Similarity=0.558 Sum_probs=28.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|.|||+|..|...|..|++.|++|.++ +
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~ 49 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-A 49 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-C
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-E
Confidence 45999999999999999999999999999 6
No 371
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=78.10 E-value=1.6 Score=45.30 Aligned_cols=30 Identities=17% Similarity=0.261 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 388999999999999999999999999997
No 372
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=78.00 E-value=1.7 Score=45.25 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.|.|||+|..|...|+.++..|+ .|+|+|.
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~ 40 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQKELADVVLVDI 40 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEec
Confidence 359999999999999999999999 9999997
No 373
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=77.76 E-value=1.8 Score=44.06 Aligned_cols=32 Identities=16% Similarity=0.279 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..++|||+|.+|.++|+.|++.|.+|.|+.|.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt 150 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRS 150 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999999999999999999999883
No 374
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=77.59 E-value=1.7 Score=47.96 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-|+|+|+|..|..+|..|+..|++|+++|++
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4899999999999999999999999999874
No 375
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=77.53 E-value=1.6 Score=47.80 Aligned_cols=31 Identities=29% Similarity=0.388 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
-.|+|||||..|...|..|.+.|++|+|+++
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~ 43 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLEAGARLTVNAL 43 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTBEEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHhCcCEEEEEcC
Confidence 3599999999999999999999999999997
No 376
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=77.35 E-value=1.4 Score=44.63 Aligned_cols=31 Identities=19% Similarity=0.228 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
-.++|+|+|.+|..+|..|++.|.+|+++.+
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R 150 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANR 150 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEES
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 3599999999999999999999999999988
No 377
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=77.29 E-value=1.7 Score=49.08 Aligned_cols=33 Identities=24% Similarity=0.429 Sum_probs=29.7
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
...|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D 359 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 359 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 3579999999999999999999997 68999974
No 378
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=77.25 E-value=1.8 Score=44.88 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=27.9
Q ss_pred cEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++. |.+|+++|++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~ 34 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVV 34 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 489999999999999999985 7899999973
No 379
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=77.18 E-value=2 Score=44.25 Aligned_cols=32 Identities=19% Similarity=0.212 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999999984
No 380
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=76.97 E-value=1.7 Score=46.02 Aligned_cols=32 Identities=31% Similarity=0.456 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|...|..|++.|++|.+++++
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999999973
No 381
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=76.82 E-value=1.8 Score=45.06 Aligned_cols=31 Identities=13% Similarity=0.053 Sum_probs=28.3
Q ss_pred cEEEECCChHHHH-HHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCE-AALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~-AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||.|.+|++ +|..|.++|++|.+.|..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~ 37 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAK 37 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 4999999999996 788999999999999973
No 382
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=76.82 E-value=1.7 Score=44.78 Aligned_cols=29 Identities=24% Similarity=0.338 Sum_probs=27.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|+ .|.+|.++.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r 32 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTR 32 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEEC
Confidence 5999999999999999999 9999999997
No 383
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=76.81 E-value=1.9 Score=44.95 Aligned_cols=31 Identities=23% Similarity=0.284 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|.|||+|..|...|..|++.|++|.++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeC
Confidence 5699999999999999999999999999987
No 384
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=76.77 E-value=1.9 Score=44.44 Aligned_cols=33 Identities=27% Similarity=0.407 Sum_probs=29.4
Q ss_pred CcccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 76 ERFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 76 ~~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.+-.|.|||+|..|...|..++ .|++|+++|+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~ 43 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVS 43 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECC
Confidence 3456999999999999999999 99999999983
No 385
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.76 E-value=1 Score=49.43 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=29.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|+|+|-.|...|..|...|++|++||++
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 5999999999999999999999999999987
No 386
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=76.69 E-value=2.5 Score=44.53 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=28.5
Q ss_pred cccEEEECC-ChHHHHHHHHHHHcCC--ceeEEee
Q 048823 77 RFDVIVVGG-GHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 77 ~~DVvVIGg-G~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
...|.|||+ |..|..+|+.++..|. .++|+|.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi 42 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDP 42 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECS
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeC
Confidence 346999997 9999999999999995 7999996
No 387
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=76.66 E-value=2.2 Score=41.44 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|...|..|++.|++|.+++++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999999999999984
No 388
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=76.49 E-value=2.2 Score=44.42 Aligned_cols=31 Identities=16% Similarity=0.259 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.++|+|+|-+|.++|.+|++.|. +|+|+.|
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR 186 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNR 186 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEEC
Confidence 459999999999999999999998 7999987
No 389
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=76.44 E-value=1.8 Score=45.02 Aligned_cols=30 Identities=27% Similarity=0.419 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.|+ .|+++|+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~ 33 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDV 33 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 38999999999999999999998 9999997
No 390
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=76.43 E-value=2.1 Score=44.48 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~ 109 (699)
..|.|||+|..|...|+.++..|. .+.|+|.+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~ 41 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVF 41 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 469999999999999999999997 89999973
No 391
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=76.33 E-value=2 Score=44.44 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
.|.|||+|..|...|+.++..|+ +|.|+|.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di 34 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDI 34 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeC
Confidence 49999999999999999999997 8999996
No 392
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=76.27 E-value=1.8 Score=44.56 Aligned_cols=31 Identities=13% Similarity=0.166 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.|+|||+|.+|..+|..|++.|. +|+++.+
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR 173 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANR 173 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECS
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 359999999999999999999998 8999987
No 393
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=76.24 E-value=1.9 Score=47.69 Aligned_cols=31 Identities=32% Similarity=0.509 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|+++|++
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~ 37 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDIS 37 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECC
Confidence 4999999999999999999999999999984
No 394
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=75.90 E-value=1.8 Score=48.87 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 328 ~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 328 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 569999999999999999999998 68999873
No 395
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=75.84 E-value=2.4 Score=42.14 Aligned_cols=32 Identities=31% Similarity=0.377 Sum_probs=29.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|...|..|++.|++|++.+++
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45999999999999999999999999999984
No 396
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=75.80 E-value=2 Score=45.28 Aligned_cols=32 Identities=25% Similarity=0.202 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|+++|..|++.|. +++|+|.+
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d 69 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHE 69 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 469999999999999999999998 79999875
No 397
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=75.50 E-value=1.8 Score=47.06 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||.|..|+..|..|++ |++|++++++
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecC
Confidence 469999999999999999998 9999999974
No 398
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=75.46 E-value=2.2 Score=40.93 Aligned_cols=31 Identities=29% Similarity=0.377 Sum_probs=28.6
Q ss_pred cEEEEC-CChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVG-GGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIG-gG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.||| +|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 388999 9999999999999999999999973
No 399
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=75.44 E-value=2.2 Score=43.68 Aligned_cols=31 Identities=32% Similarity=0.367 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.++|+|+|-+|.++|.+|++.|. +|+|+.|
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R 159 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADL 159 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEEC
Confidence 459999999999999999999998 6999987
No 400
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=75.22 E-value=2.4 Score=46.18 Aligned_cols=32 Identities=28% Similarity=0.514 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|+++|..|++.|. +++|+|.+
T Consensus 41 ~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D 73 (434)
T 1tt5_B 41 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 73 (434)
T ss_dssp CCEEEECSSTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 569999999999999999999997 79999973
No 401
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=75.17 E-value=2 Score=44.33 Aligned_cols=30 Identities=17% Similarity=0.321 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHcC--CceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLG--AKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G--~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.| .+|.++++
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~ 34 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDA 34 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcC
Confidence 4899999999999999999999 68999997
No 402
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=75.09 E-value=2.2 Score=43.30 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||.|..|...|..|++.|++|++++++
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCC
Confidence 4899999999999999999999999999984
No 403
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=74.74 E-value=1.8 Score=47.06 Aligned_cols=32 Identities=28% Similarity=0.371 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-...|||.|..|+..|..|++.|++|+++|++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~ 43 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDIN 43 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECC
Confidence 45889999999999999999999999999984
No 404
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=74.65 E-value=1.7 Score=46.81 Aligned_cols=30 Identities=13% Similarity=0.255 Sum_probs=27.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|+..|..|++ |++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~ 31 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDIL 31 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECC
Confidence 38899999999999999999 9999999973
No 405
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=74.64 E-value=2.7 Score=42.25 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
.++|||+|-+|.+++..|++.|. +|.++.|.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~ 141 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRT 141 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESC
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 69999999999999999999998 89999984
No 406
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=74.55 E-value=2.3 Score=43.62 Aligned_cols=32 Identities=41% Similarity=0.430 Sum_probs=29.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||.|..|...|..|++.|++|++++++
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 35999999999999999999999999999973
No 407
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=74.24 E-value=2.6 Score=43.24 Aligned_cols=31 Identities=32% Similarity=0.303 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|.|||+|..|..+|..|...|.+|+++++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~ 188 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGAR 188 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEEC
Confidence 4599999999999999999999999999997
No 408
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=74.12 E-value=2.1 Score=43.61 Aligned_cols=32 Identities=13% Similarity=0.106 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
-.++|+|+|.+|..+|..|++.|. +|.++.|.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 150 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRT 150 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSC
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 459999999999999999999998 89999884
No 409
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=74.08 E-value=2.4 Score=43.88 Aligned_cols=31 Identities=39% Similarity=0.606 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|...|+.++..|+ .+.|+|.
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di 47 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDL 47 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcC
Confidence 459999999999999999999998 8999997
No 410
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=73.74 E-value=2.7 Score=42.94 Aligned_cols=31 Identities=35% Similarity=0.344 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|.|||.|..|..+|..|...|.+|+++++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr 186 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGAR 186 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEEC
Confidence 4599999999999999999999999999997
No 411
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=73.56 E-value=11 Score=40.47 Aligned_cols=50 Identities=14% Similarity=0.047 Sum_probs=34.3
Q ss_pred HHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEEEcCc--cEEecCeEEEecCCC
Q 048823 176 AMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVCTFFG--MNFYAPSVVLTTGTF 230 (699)
Q Consensus 176 ~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG--~~i~Ad~VVlAtG~~ 230 (699)
.+.+.+.+++. ||+++ ++.|+++. .+++ .+...+| +++.+|.||.|+|..
T Consensus 203 ~~~l~~~l~~~-GV~~~~~~~v~~v~---~~~~-~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 203 KRLVEDLFAER-NIDWIANVAVKAIE---PDKV-IYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEEC---SSEE-EEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHhC-CeEEEeCceEEEEe---CCce-EEEeeCCCceEeecceEEEeccCC
Confidence 34556666676 89997 68999885 2332 2333343 489999999999964
No 412
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=73.43 E-value=2.8 Score=43.72 Aligned_cols=31 Identities=16% Similarity=0.272 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
..|.|||+|..|...|+.|+..|+ .|.|+|.
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di 39 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDI 39 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeC
Confidence 469999999999999999999998 9999997
No 413
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=73.24 E-value=2.5 Score=43.55 Aligned_cols=30 Identities=20% Similarity=0.284 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
.|.|||+|..|.+.|+.|+..|+ +|.|+|.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~ 33 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI 33 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 38999999999999999999998 8999997
No 414
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=73.17 E-value=3 Score=43.32 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.++|+|+|-+|.++|.+|++.|. +|.|+.|
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nR 180 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNR 180 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEEC
Confidence 459999999999999999999998 7999987
No 415
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=73.09 E-value=2.2 Score=46.93 Aligned_cols=32 Identities=16% Similarity=0.315 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
..|.|||.|..|+..|..|++. |++|++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 3599999999999999999999 8999999974
No 416
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=73.05 E-value=2.1 Score=43.80 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHHc-----C-CceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARL-----G-AKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~-----G-~kV~LlE~ 108 (699)
..|.|||+|..|...|..|++. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 3599999999999999999999 9 99999986
No 417
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=72.94 E-value=2.6 Score=48.02 Aligned_cols=32 Identities=34% Similarity=0.456 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
..|+|||+|..|+.+|..|++.|. +++|+|.+
T Consensus 18 s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D 50 (640)
T 1y8q_B 18 GRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLD 50 (640)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 469999999999999999999997 79999975
No 418
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=72.93 E-value=2.8 Score=42.23 Aligned_cols=31 Identities=26% Similarity=0.198 Sum_probs=28.5
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 3889999999999999999999999999873
No 419
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=72.56 E-value=2.6 Score=42.68 Aligned_cols=31 Identities=29% Similarity=0.395 Sum_probs=28.8
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|+|||+|.+|.+.|..|++.|.+|.++++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r 160 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNR 160 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEEC
Confidence 4599999999999999999999999999987
No 420
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=72.51 E-value=1.9 Score=44.17 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=29.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||.|..|...|..|++.|++|++++++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 46999999999999999999999999999984
No 421
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=72.33 E-value=2 Score=43.83 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=27.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.++|+|+|.+|.++|..|++.| +|+++.+
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r 158 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANR 158 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEEC
Confidence 5999999999999999999999 9999987
No 422
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=72.21 E-value=3.6 Score=42.24 Aligned_cols=32 Identities=13% Similarity=0.142 Sum_probs=29.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|...|..|++.|++|.++++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCC
Confidence 35999999999999999999999999999873
No 423
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=72.21 E-value=2.8 Score=43.91 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|...|+.++..|+ .+.|+|.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di 54 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDV 54 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 359999999999999999999997 8999996
No 424
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=72.09 E-value=2.3 Score=43.21 Aligned_cols=31 Identities=23% Similarity=0.160 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||.|..|...|..|++.|++|++++++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRN 33 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSS
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCC
Confidence 4899999999999999999999999999984
No 425
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=72.03 E-value=3.3 Score=43.08 Aligned_cols=32 Identities=28% Similarity=0.503 Sum_probs=28.5
Q ss_pred cccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
...|.|||+|..|.+.|+.|+..++ .+.|+|.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di 38 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDV 38 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeC
Confidence 3569999999999999999999886 7888986
No 426
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=71.99 E-value=3.4 Score=39.61 Aligned_cols=30 Identities=27% Similarity=0.485 Sum_probs=28.4
Q ss_pred EEEECC-ChHHHHHHHHHHHcCCceeEEeee
Q 048823 80 VIVVGG-GHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 80 VvVIGg-G~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
|+|.|| |..|...+..|++.|++|.++.++
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 899998 999999999999999999999984
No 427
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=71.96 E-value=1.8 Score=48.46 Aligned_cols=47 Identities=23% Similarity=0.287 Sum_probs=36.2
Q ss_pred cCCeEEE-eeEEEEEEecCC--CCEEEEEEc--Ccc--EE---ecCeEEEecCCCCC
Q 048823 186 TANLCIR-EAMVTDILLGKN--DNVEGVCTF--FGM--NF---YAPSVVLTTGTFMS 232 (699)
Q Consensus 186 ~~gv~i~-~~~V~~l~~e~~--g~v~gV~t~--dG~--~i---~Ad~VVlAtG~~~~ 232 (699)
.+|++++ ++.|++|..+++ ++++||.+. +|. ++ .++.||+|+|++..
T Consensus 206 ~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~s 262 (536)
T 1ju2_A 206 SNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGT 262 (536)
T ss_dssp TTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCC
Confidence 3689997 699999998732 389999875 454 34 56899999999843
No 428
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=71.94 E-value=2.4 Score=43.12 Aligned_cols=32 Identities=19% Similarity=0.253 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|...|..|++.|++|.+++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35999999999999999999999999999873
No 429
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=71.93 E-value=3 Score=44.17 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=30.6
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
...|.|||.|..|...|..|++.|++|+++++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 357999999999999999999999999999984
No 430
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=71.92 E-value=2.6 Score=43.06 Aligned_cols=32 Identities=22% Similarity=0.090 Sum_probs=29.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~~ 109 (699)
-.++|+|+|-+|.++|+.|++.|. +|+|+.|.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 469999999999999999999998 89999873
No 431
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=71.84 E-value=3.1 Score=42.30 Aligned_cols=31 Identities=23% Similarity=0.270 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.++|+|+|-+|.++|.+|++.|. +|+++.|
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R 152 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANR 152 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeC
Confidence 459999999999999999999996 8999987
No 432
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=71.82 E-value=4.6 Score=42.82 Aligned_cols=32 Identities=25% Similarity=0.475 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||+|..|...|.++.+.|++|++++..
T Consensus 13 ~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 13 ATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 35999999999999999999999999999975
No 433
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=71.81 E-value=2.8 Score=43.75 Aligned_cols=31 Identities=23% Similarity=0.429 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|.+.|+.|+..|+ .+.|+|.
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~ 38 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDV 38 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEec
Confidence 359999999999999999999997 8999996
No 434
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=71.66 E-value=3.5 Score=39.29 Aligned_cols=30 Identities=20% Similarity=0.351 Sum_probs=28.2
Q ss_pred EEEECC-ChHHHHHHHHHHHcCCceeEEeee
Q 048823 80 VIVVGG-GHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 80 VvVIGg-G~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
|+|.|| |..|...+..|++.|++|.++.++
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 899996 999999999999999999999985
No 435
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=71.56 E-value=1.7 Score=45.82 Aligned_cols=31 Identities=19% Similarity=0.346 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.|++|.++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 6999999999999999999999999999873
No 436
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=71.54 E-value=3.1 Score=44.51 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=29.8
Q ss_pred ccEEEECC-ChHHHHHHHHHHHcCC---ceeEEeee
Q 048823 78 FDVIVVGG-GHAGCEAALASARLGA---KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGg-G~AGl~AA~~LAr~G~---kV~LlE~~ 109 (699)
..|+|||| |.+|..|+..+...|+ .|.++|.+
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~ 250 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIK 250 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeecc
Confidence 56999999 9999999999999998 89999985
No 437
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=71.53 E-value=2.9 Score=41.59 Aligned_cols=30 Identities=20% Similarity=0.359 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHcC-CceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLG-AKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G-~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.| ++|.++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECC
Confidence 3889999999999999999999 99999987
No 438
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=71.52 E-value=3.3 Score=42.14 Aligned_cols=30 Identities=27% Similarity=0.321 Sum_probs=28.2
Q ss_pred cEEEEC-CChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVG-GGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIG-gG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.++|+| +|.+|.++|..|++.|.+|+++.+
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R 151 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGR 151 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEEC
Confidence 589999 899999999999999999999987
No 439
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=71.26 E-value=1.5 Score=43.16 Aligned_cols=31 Identities=13% Similarity=0.025 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|+|+|..|...|..|.+.|+ |+++|++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~ 40 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDE 40 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECC
Confidence 359999999999999999999999 9999984
No 440
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=71.24 E-value=2.5 Score=43.16 Aligned_cols=31 Identities=23% Similarity=0.313 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||.|..|...|..|++.|++|++++++
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 5999999999999999999999999999973
No 441
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=71.12 E-value=2.8 Score=43.42 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCC
Confidence 35999999999999999999999999999984
No 442
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=70.99 E-value=3.2 Score=42.34 Aligned_cols=31 Identities=10% Similarity=0.098 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.++|+|+|.+|..+|..|++.|. +|.++.|
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R 158 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNR 158 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEEC
Confidence 459999999999999999999996 8999987
No 443
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=70.89 E-value=2.6 Score=49.04 Aligned_cols=31 Identities=29% Similarity=0.385 Sum_probs=29.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|+++|++
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 344 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVN 344 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECC
Confidence 5999999999999999999999999999984
No 444
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=70.85 E-value=3.6 Score=42.81 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
..|.|||+|..|.+.|..++..|+ .+.|+|.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di 37 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDI 37 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeC
Confidence 359999999999999999999988 8999997
No 445
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=70.84 E-value=3.6 Score=39.98 Aligned_cols=32 Identities=22% Similarity=0.289 Sum_probs=29.4
Q ss_pred ccEEEECC-ChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGG-GHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGg-G~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|+|.|| |..|...|..|++.|++|+++.++
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECC
Confidence 35999998 999999999999999999999985
No 446
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=70.82 E-value=4.3 Score=44.15 Aligned_cols=30 Identities=17% Similarity=0.312 Sum_probs=28.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC---ceeEEe
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA---KTLLLT 107 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~---kV~LlE 107 (699)
..|+|+|+|-||..+|..|.+.|. +|.|++
T Consensus 187 ~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 187 ITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 459999999999999999999998 799999
No 447
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=70.78 E-value=3.9 Score=38.42 Aligned_cols=31 Identities=16% Similarity=0.389 Sum_probs=29.0
Q ss_pred cEEEECC-ChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGG-GHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGg-G~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|+|| |..|...+..|.+.|++|.++.++
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Confidence 4999998 999999999999999999999985
No 448
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=70.56 E-value=2.6 Score=48.64 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=64.7
Q ss_pred ccEEEEC--CChHHHHHHHHHHHcCCceeEEeeecccccCCCCCCCCCCCccchhhHHHHhhcCccchhhchhhhhHHhh
Q 048823 78 FDVIVVG--GGHAGCEAALASARLGAKTLLLTLNIDKIAWQPCNPAVGGPAKSQLVHEVDALGGEIGKVADMCYLQKRVL 155 (699)
Q Consensus 78 ~DVvVIG--gG~AGl~AA~~LAr~G~kV~LlE~~~~~~g~~~c~~s~Gg~~~~~l~~el~~lg~~~~~~~d~~~i~~~~~ 155 (699)
-+|+||| ||..|+++|..|++.|.+|+++++. +... ...
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~----------~~l~------------------~~~----------- 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPG----------AQVS------------------SWT----------- 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESS----------SSTT------------------GGG-----------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecc----------cccc------------------ccc-----------
Confidence 3599999 9999999999999999999999973 1000 000
Q ss_pred ccCCCccccccccccCHHHHHHHHHHHHHccCCeEEE-eeEEEEEEecCCCCEEEEE---EcCccEEecCeEEEecCCC
Q 048823 156 NTSRGPAVWALRAQTDKREYAMRMKNIVESTANLCIR-EAMVTDILLGKNDNVEGVC---TFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 156 ~~s~g~~~~~~r~~~d~~~~~~~L~~~l~~~~gv~i~-~~~V~~l~~e~~g~v~gV~---t~dG~~i~Ad~VVlAtG~~ 230 (699)
+...+...+.+.+++. ||+++ ++.|+++..+ + ..+. +.++.++.||.||+|+|..
T Consensus 565 ---------------~~~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~--~--~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 565 ---------------NNTFEVNRIQRRLIEN-GVARVTDHAVVAVGAG--G--VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp ---------------GGGTCHHHHHHHHHHT-TCEEEESEEEEEEETT--E--EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred ---------------ccchhHHHHHHHHHHC-CCEEEcCcEEEEEECC--e--EEEEEccCCeEEEEECCEEEECCCCC
Confidence 0001123445556665 89987 5899999732 2 2233 2356689999999999975
No 449
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=70.51 E-value=2.2 Score=41.56 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=28.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeE-Eeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLL-LTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~L-lE~~ 109 (699)
..|.|||+|..|...|..|++.|++|++ ++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 4699999999999999999999999998 7763
No 450
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=70.36 E-value=3.4 Score=41.60 Aligned_cols=31 Identities=32% Similarity=0.398 Sum_probs=28.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGA--KTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.|+ +|++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 38999999999999999999998 89999873
No 451
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=70.29 E-value=3.4 Score=43.21 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=28.4
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|...|+.++..|. .+.|+|.
T Consensus 20 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di 52 (331)
T 4aj2_A 20 NKITVVGVGAVGMACAISILMKDLADELALVDV 52 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEeC
Confidence 459999999999999999999997 7999996
No 452
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=70.29 E-value=3.5 Score=42.76 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=28.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|...|+.|+..|. .+.|+|.
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di 39 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDL 39 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 469999999999999999999885 7999986
No 453
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=69.91 E-value=3.3 Score=45.81 Aligned_cols=31 Identities=26% Similarity=0.384 Sum_probs=29.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|||.|..|..+|..|...|++|+++|+.
T Consensus 276 tV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999973
No 454
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=69.90 E-value=9 Score=38.90 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=27.2
Q ss_pred cEEEECCC---hHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGG---HAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG---~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
-++|.||+ ..|.+.|..|++.|++|+++.+
T Consensus 32 ~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r 64 (296)
T 3k31_A 32 KGVIIGVANDKSLAWGIAKAVCAQGAEVALTYL 64 (296)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeC
Confidence 48899985 7899999999999999999987
No 455
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=69.81 E-value=2.5 Score=46.65 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=28.7
Q ss_pred cEEEECCChHHHHHHHHHHHc--CCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARL--GAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~--G~kV~LlE~~ 109 (699)
.|.|||.|..|+..|..|++. |++|++++++
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 599999999999999999998 7899999974
No 456
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=69.49 E-value=2.2 Score=45.64 Aligned_cols=29 Identities=31% Similarity=0.397 Sum_probs=27.2
Q ss_pred cEEEECCChHHHHHHHHHHH-cCCceeEEe
Q 048823 79 DVIVVGGGHAGCEAALASAR-LGAKTLLLT 107 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr-~G~kV~LlE 107 (699)
.|.|||+|..|...|..|++ .|++|.+++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 59999999999999999998 599999998
No 457
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=69.46 E-value=3.7 Score=42.23 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||.|..|...|..|++.|++|+++++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~ 41 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRS 41 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45999999999999999999999999999984
No 458
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=69.45 E-value=3.4 Score=43.11 Aligned_cols=31 Identities=29% Similarity=0.398 Sum_probs=28.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|...|+.|+..|+ .+.|+|.
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 42 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDI 42 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 359999999999999999999987 7999996
No 459
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=69.43 E-value=3.6 Score=43.69 Aligned_cols=31 Identities=23% Similarity=0.210 Sum_probs=28.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
..|+|+|.|..|..+|..|.+.|++|++.|+
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 3599999999999999999999999998886
No 460
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=69.35 E-value=3.2 Score=43.03 Aligned_cols=31 Identities=19% Similarity=0.148 Sum_probs=29.2
Q ss_pred cEEEECCChHHHHHHHHHHHcC-CceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLG-AKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G-~kV~LlE~~ 109 (699)
.|.|||.|..|...|..|++.| ++|+++++.
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5999999999999999999999 999999984
No 461
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=69.12 E-value=3.9 Score=40.98 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=28.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.++|||+|.+|...|..|.+.|.+|.++++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r 147 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNR 147 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 699999999999999999999999999987
No 462
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=69.10 E-value=4.1 Score=45.71 Aligned_cols=36 Identities=22% Similarity=0.350 Sum_probs=32.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeeecccc
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLNIDKI 113 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~~~~~ 113 (699)
-.++|||+|..|...|..|.+.|++|+++|++.+.+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~ 384 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPV 384 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHH
Confidence 469999999999999999999999999999975443
No 463
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=69.06 E-value=3.7 Score=42.55 Aligned_cols=32 Identities=19% Similarity=0.236 Sum_probs=29.0
Q ss_pred ccEEEECCChHHHHHHHHHHHcC----CceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLG----AKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G----~kV~LlE~~ 109 (699)
..|.|||+|..|...|..|++.| .+|.++++.
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCC
Confidence 46999999999999999999999 789999873
No 464
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=68.89 E-value=3.1 Score=42.29 Aligned_cols=31 Identities=19% Similarity=0.156 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.|++|.+++++
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5999999999999999999999999999873
No 465
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=68.73 E-value=3.7 Score=44.41 Aligned_cols=32 Identities=22% Similarity=0.346 Sum_probs=29.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|+|||.|..|..+|..|...|.+|++.|++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35999999999999999999999999999973
No 466
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=68.68 E-value=3.8 Score=41.50 Aligned_cols=31 Identities=13% Similarity=0.245 Sum_probs=29.0
Q ss_pred cEEEECC-ChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGG-GHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGg-G~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+ |..|...|..|++.|++|+++++.
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 5999999 999999999999999999999873
No 467
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=68.59 E-value=3.3 Score=42.45 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=28.9
Q ss_pred cEEEEC-CChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVG-GGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIG-gG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.||| +|..|.+.|..|++.|++|.+++++
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~ 54 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRE 54 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTT
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 499999 9999999999999999999999873
No 468
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=68.55 E-value=3.7 Score=42.62 Aligned_cols=30 Identities=27% Similarity=0.524 Sum_probs=27.7
Q ss_pred cEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
.|.|||+|..|...|+.++..|+ .+.|+|.
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~ 33 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDI 33 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 38999999999999999999987 8999997
No 469
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=68.53 E-value=5.3 Score=42.37 Aligned_cols=31 Identities=32% Similarity=0.525 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|||+|..|...|.++.+.|++|++++..
T Consensus 16 ~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~ 46 (389)
T 3q2o_A 16 TIGIIGGGQLGRMMALAAKEMGYKIAVLDPT 46 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEeCC
Confidence 5999999999999999999999999999874
No 470
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=68.41 E-value=3.6 Score=41.13 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|.|+|..|...+..|.+.|++|.++.+.
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESC
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcC
Confidence 4999999999999999999999999999883
No 471
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=68.40 E-value=4.9 Score=40.23 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|+|.|+|..|...+..|.+.|++|+++.+.
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999999999999999999999999999985
No 472
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=68.39 E-value=3.5 Score=44.32 Aligned_cols=31 Identities=29% Similarity=0.356 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
-.|+|||+|..|..+|..|...|. +|+++++
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 359999999999999999999998 8999987
No 473
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=68.31 E-value=3.3 Score=42.00 Aligned_cols=31 Identities=26% Similarity=0.194 Sum_probs=28.5
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
..|+|||+|-+|.++|++|++.|. +|.|+.|
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nR 151 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYAR 151 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence 359999999999999999999997 7999987
No 474
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=68.15 E-value=3.8 Score=45.15 Aligned_cols=31 Identities=39% Similarity=0.401 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|.|||+|..|...|..|++.|++|.++++.
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 5999999999999999999999999999974
No 475
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=68.09 E-value=3.5 Score=46.00 Aligned_cols=30 Identities=33% Similarity=0.513 Sum_probs=27.4
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.++|+|||-+|.++|.+|++.|.+|+++.+
T Consensus 366 ~vlV~GaGGig~aia~~L~~~G~~V~i~~R 395 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANR 395 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCC-CEEEES
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 599999999999999999999999999987
No 476
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=67.98 E-value=3.2 Score=41.28 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=28.1
Q ss_pred cEEEECC-C-hHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGG-G-HAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGg-G-~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-|+|.|| | -.|.+.|..|++.|++|++++++
T Consensus 24 ~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYH 56 (266)
T ss_dssp EEEESSCSSSSHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEECCCCCchHHHHHHHHHHCCCEEEEecCC
Confidence 4899999 7 59999999999999999999874
No 477
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=67.92 E-value=2.7 Score=43.99 Aligned_cols=31 Identities=19% Similarity=0.309 Sum_probs=28.9
Q ss_pred cEEEECCChHHHHHHHHHHHcC-------CceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLG-------AKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G-------~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.| ++|.++++.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 5999999999999999999999 899999984
No 478
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=67.74 E-value=3 Score=44.14 Aligned_cols=31 Identities=6% Similarity=0.151 Sum_probs=28.8
Q ss_pred cEEEECCChHHHHHHHHHHHcC-------CceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLG-------AKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G-------~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.| .+|.++++.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~ 60 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRD 60 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCS
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECC
Confidence 4999999999999999999999 999999973
No 479
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=67.71 E-value=4.1 Score=42.14 Aligned_cols=32 Identities=31% Similarity=0.359 Sum_probs=29.3
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~~ 109 (699)
..|.|||.|..|.+.|..|++.|+ +|.+++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 359999999999999999999999 89999973
No 480
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=67.62 E-value=3.8 Score=45.17 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=30.4
Q ss_pred cccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 77 RFDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 77 ~~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+.+|.|||.|..|...|..|++.|++|.++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 357999999999999999999999999999984
No 481
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=67.59 E-value=3.8 Score=42.27 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=29.2
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
..|.|||.|..|...|..|++.|+ +|+++++
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcC
Confidence 459999999999999999999999 9999997
No 482
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=67.52 E-value=3.8 Score=42.43 Aligned_cols=31 Identities=26% Similarity=0.468 Sum_probs=27.9
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC--ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA--KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~--kV~LlE~ 108 (699)
..|.|||+|..|.+.|+.++..|. .+.|+|.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di 39 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDA 39 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 359999999999999999998885 7999997
No 483
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=67.31 E-value=3.4 Score=43.86 Aligned_cols=42 Identities=19% Similarity=0.069 Sum_probs=31.6
Q ss_pred CCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 187 ANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 187 ~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+++++ ++.+..+..+ ++...|.+.+|+++.+|.||+|+|..
T Consensus 215 ~gi~v~~~~~v~~v~~~--~~~~~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKTD--TEAMTVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp CSEEEECTTTTCEEEEE--TTTTEEEETTSCEEECSEEEECCCEE
T ss_pred cCcEEEeCceEEEEEec--ccceEEEcCCCcEEEeeEEEEecCcC
Confidence 378887 5666666654 33345889999999999999999853
No 484
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=67.29 E-value=3.2 Score=48.22 Aligned_cols=31 Identities=32% Similarity=0.442 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..+++.|++|+++|++
T Consensus 316 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~ 346 (715)
T 1wdk_A 316 QAAVLGAGIMGGGIAYQSASKGTPILMKDIN 346 (715)
T ss_dssp SEEEECCHHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEEECCChhhHHHHHHHHhCCCEEEEEECC
Confidence 4999999999999999999999999999974
No 485
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=67.21 E-value=3.1 Score=43.31 Aligned_cols=32 Identities=25% Similarity=0.201 Sum_probs=28.9
Q ss_pred ccEEEECCC-hHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGG-HAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG-~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|+|||+| .+|..+|..|...|..|+++++.
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 469999999 67999999999999999999873
No 486
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=67.18 E-value=3.6 Score=41.72 Aligned_cols=31 Identities=19% Similarity=0.207 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.|++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3889999999999999999999999999873
No 487
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=66.99 E-value=4.2 Score=42.03 Aligned_cols=29 Identities=24% Similarity=0.434 Sum_probs=26.9
Q ss_pred EEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 80 VIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 80 VvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
|.|||+|..|...|+.++..|+ .+.|+|.
T Consensus 2 I~IiGaG~vG~~~a~~l~~~~l~el~L~Di 31 (308)
T 2d4a_B 2 ITILGAGKVGMATAVMLMMRGYDDLLLIAR 31 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCSCEEEECS
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcC
Confidence 8899999999999999999888 5999997
No 488
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=66.66 E-value=3.7 Score=47.79 Aligned_cols=32 Identities=28% Similarity=0.346 Sum_probs=29.7
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
-.|.|||+|..|...|..++..|+.|+|+|..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~ 348 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESD 348 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSS
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccch
Confidence 35999999999999999999999999999974
No 489
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=66.63 E-value=4.3 Score=40.52 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=28.0
Q ss_pred cEEEECCChHHHHHHHHHHHcCCc-eeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAK-TLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~k-V~LlE~ 108 (699)
.|.|||+|..|...|..+++.|++ |.++++
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECS
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeC
Confidence 599999999999999999999998 888887
No 490
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=66.50 E-value=4.7 Score=43.14 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..++|+|||+.|...|-.++..|++|+|+|..
T Consensus 205 ~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R 236 (386)
T 2we8_A 205 PRMLVFGAIDFAAAVAQQGAFLGYRVTVCDAR 236 (386)
T ss_dssp CEEEEECCSTHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEECCc
Confidence 56999999999999999999999999999974
No 491
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=66.12 E-value=4 Score=45.60 Aligned_cols=31 Identities=13% Similarity=0.081 Sum_probs=28.6
Q ss_pred ccEEEECCChHHHHHHHHHHHcCC-ceeEEee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGA-KTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~-kV~LlE~ 108 (699)
..|+|||+|..|+++|..|++.|. +++|+|.
T Consensus 33 ~~VlvvG~GGlGseiak~La~aGVg~itlvD~ 64 (531)
T 1tt5_A 33 AHVCLINATATGTEILKNLVLPGIGSFTIIDG 64 (531)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCeEEEEeC
Confidence 469999999999999999999998 6889996
No 492
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=66.10 E-value=4.6 Score=44.73 Aligned_cols=32 Identities=19% Similarity=0.122 Sum_probs=30.1
Q ss_pred ccEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 78 FDVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 78 ~DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
..|.|||.|..|...|..|++.|++|.++++.
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~ 42 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRT 42 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 56999999999999999999999999999984
No 493
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=66.02 E-value=4.4 Score=44.62 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=29.3
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
+|.|||.|..|...|..|++.|++|.++++.
T Consensus 4 ~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~ 34 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRT 34 (482)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred eEEEEChHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5999999999999999999999999999984
No 494
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=65.93 E-value=3.4 Score=41.67 Aligned_cols=29 Identities=31% Similarity=0.263 Sum_probs=27.2
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++ |++|.++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~ 31 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNR 31 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECS
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeC
Confidence 48999999999999999999 999999987
No 495
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=65.88 E-value=5.2 Score=39.00 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=27.8
Q ss_pred EEEECC-ChHHHHHHHHHHHcCCceeEEeee
Q 048823 80 VIVVGG-GHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 80 VvVIGg-G~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
|+|.|| |..|...|..|++.|++|+++.+.
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 889987 899999999999999999999984
No 496
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=65.84 E-value=4.9 Score=43.74 Aligned_cols=55 Identities=15% Similarity=0.058 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHcc-------CCeEEE-eeEEEEEEecCCCCEEEEEEcCccEEecCeEEEecCCC
Q 048823 174 EYAMRMKNIVEST-------ANLCIR-EAMVTDILLGKNDNVEGVCTFFGMNFYAPSVVLTTGTF 230 (699)
Q Consensus 174 ~~~~~L~~~l~~~-------~gv~i~-~~~V~~l~~e~~g~v~gV~t~dG~~i~Ad~VVlAtG~~ 230 (699)
.+.+.|.+.+.+. .+..+. ++.|++|..+ ++++. |++.+|++++||.||+|++..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETTSCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECCCCEEEcCEEEEecCHH
Confidence 3455555554332 134565 7999999876 45554 889999899999999999975
No 497
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=65.37 E-value=17 Score=35.84 Aligned_cols=31 Identities=19% Similarity=0.166 Sum_probs=27.3
Q ss_pred ccEEEECC---ChHHHHHHHHHHHcCCceeEEee
Q 048823 78 FDVIVVGG---GHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 78 ~DVvVIGg---G~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
--|+|.|| |..|.+.|..|++.|++|+++.+
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r 48 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYV 48 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEec
Confidence 34889996 47899999999999999999987
No 498
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=65.23 E-value=4.4 Score=40.32 Aligned_cols=30 Identities=17% Similarity=0.046 Sum_probs=27.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTL 108 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~ 108 (699)
.|.|||+|..|...|..|++.|++|.+.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 388999999999999999999999988764
No 499
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=64.92 E-value=5.2 Score=39.70 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=28.6
Q ss_pred cEEEECCChHHHHHHHHHHHcC----CceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLG----AKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G----~kV~LlE~~ 109 (699)
.|.|||+|..|...|..|++.| .+|.++++.
T Consensus 6 ~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 6 KLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred EEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 5999999999999999999999 689999884
No 500
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=64.90 E-value=5 Score=42.11 Aligned_cols=31 Identities=13% Similarity=0.049 Sum_probs=29.1
Q ss_pred cEEEECCChHHHHHHHHHHHcCCceeEEeee
Q 048823 79 DVIVVGGGHAGCEAALASARLGAKTLLLTLN 109 (699)
Q Consensus 79 DVvVIGgG~AGl~AA~~LAr~G~kV~LlE~~ 109 (699)
.|.|||.|..|.+.|..|++.|.+|.+++++
T Consensus 10 kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~ 40 (341)
T 3ktd_A 10 PVCILGLGLIGGSLLRDLHAANHSVFGYNRS 40 (341)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred EEEEEeecHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4999999999999999999999999999984
Done!