Your job contains 1 sequence.
>048824
MDLSLVPYKHQRPHPQQEPNIINYKECMKNHAASIGGHANDGCCEFMPRADDSLTCAACG
CHRNFHRREVRGQLLLQPKRLLLFKDPTKLVGAVDRYDEYDRRSETPEREEVNLNVCPPG
NVGPATGKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVW
MHNNKNASHRRKDESASQSPTEAAPPAAA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048824
(209 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012602 - symbol:HB31 "AT1G14440" species:3702... 229 3.6e-40 2
TAIR|locus:2065304 - symbol:HB21 "homeobox protein 21" sp... 234 4.6e-40 2
TAIR|locus:2121989 - symbol:HB22 "AT4G24660" species:3702... 419 2.9e-39 1
TAIR|locus:2167052 - symbol:HB23 "AT5G39760" species:3702... 222 8.3e-39 2
TAIR|locus:2095157 - symbol:HB34 "AT3G28920" species:3702... 215 7.3e-38 2
TAIR|locus:2025121 - symbol:HB33 "AT1G75240" species:3702... 224 4.0e-37 2
TAIR|locus:2062141 - symbol:HB24 "AT2G18350" species:3702... 223 4.0e-37 2
TAIR|locus:2168240 - symbol:HB25 "AT5G65410" species:3702... 223 5.7e-36 2
TAIR|locus:2026734 - symbol:ZFHD1 "AT1G69600" species:370... 195 3.4e-34 2
TAIR|locus:2077957 - symbol:HB28 "homeobox protein 28" sp... 366 1.2e-33 1
TAIR|locus:2175138 - symbol:HB26 "AT5G60480" species:3702... 195 1.0e-32 2
TAIR|locus:2165502 - symbol:HB27 "AT5G42780" species:3702... 172 4.5e-27 2
TAIR|locus:2150871 - symbol:HB30 "AT5G15210" species:3702... 289 1.8e-25 1
TAIR|locus:505006123 - symbol:HB32 "AT1G14687" species:37... 151 8.8e-23 2
TAIR|locus:4010713452 - symbol:MIF3 "mini zinc finger 3" ... 207 8.6e-17 1
TAIR|locus:2019190 - symbol:MIF1 "AT1G74660" species:3702... 183 3.0e-14 1
TAIR|locus:1006230234 - symbol:MIF2 "mini zinc finger 2" ... 183 3.0e-14 1
>TAIR|locus:2012602 [details] [associations]
symbol:HB31 "AT1G14440" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR009057 Pfam:PF04770 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC012188 HOGENOM:HOG000238105
InterPro:IPR006455 InterPro:IPR006456 ProDom:PD125774
TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566 PROSITE:PS51523
eggNOG:NOG244803 ProtClustDB:CLSN2682946 EMBL:AY074266
EMBL:AY096738 EMBL:AB493456 IPI:IPI00526436 PIR:A86279
RefSeq:NP_172896.1 RefSeq:NP_973826.1 UniGene:At.41972
ProteinModelPortal:Q9M9S0 SMR:Q9M9S0 IntAct:Q9M9S0 STRING:Q9M9S0
PaxDb:Q9M9S0 PRIDE:Q9M9S0 EnsemblPlants:AT1G14440.1
EnsemblPlants:AT1G14440.2 GeneID:838006 KEGG:ath:AT1G14440
TAIR:At1g14440 InParanoid:Q9M9S0 OMA:HHAANSA PhylomeDB:Q9M9S0
ArrayExpress:Q9M9S0 Genevestigator:Q9M9S0 Uniprot:Q9M9S0
Length = 312
Score = 229 (85.7 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 39/58 (67%), Positives = 49/58 (84%)
Query: 128 KSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHNNK 185
+ KR RTKFT EQK+KML FAE++GW++QRQ+D + +FC E+GVKR VLKVWMHNNK
Sbjct: 217 QKKRFRTKFTPEQKEKMLSFAEKVGWKIQRQEDCVVQRFCEEIGVKRRVLKVWMHNNK 274
Score = 215 (80.7 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 8 YKHQRPHPQ------QEPNIINYKECMKNHAASIGGHANDGCCEFMPRADD----SLTCA 57
+ HQ PH ++P +I YKEC+KNHAA++GG+A DGC EFMP +D +LTC+
Sbjct: 69 HHHQDPHHVGYNAIIKKP-MIKYKECLKNHAAAMGGNATDGCGEFMPSGEDGSIEALTCS 127
Query: 58 ACGCHRNFHRREVRGQ 73
AC CHRNFHR+EV G+
Sbjct: 128 ACNCHRNFHRKEVEGE 143
>TAIR|locus:2065304 [details] [associations]
symbol:HB21 "homeobox protein 21" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 PROSITE:PS50071
Pfam:PF04770 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC004136 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AY773834 IPI:IPI00531101
PIR:T00609 RefSeq:NP_178358.1 UniGene:At.41484
ProteinModelPortal:O64722 SMR:O64722 IntAct:O64722 STRING:O64722
EnsemblPlants:AT2G02540.1 GeneID:814784 KEGG:ath:AT2G02540
TAIR:At2g02540 eggNOG:NOG246209 InParanoid:O64722 OMA:HHANSAP
PhylomeDB:O64722 ProtClustDB:CLSN2682946 ArrayExpress:O64722
Genevestigator:O64722 Uniprot:O64722
Length = 310
Score = 234 (87.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 42/79 (53%), Positives = 56/79 (70%)
Query: 118 PPGNVGPATGKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVL 177
PP + KR RTKFTQEQK+KM+ FAER+GW++QRQ++ + Q C E+G++R VL
Sbjct: 211 PPSPYSYGHNQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVL 270
Query: 178 KVWMHNNK-NASHRRKDES 195
KVWMHNNK N S + + S
Sbjct: 271 KVWMHNNKQNLSKKSNNVS 289
Score = 209 (78.6 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 16 QQEPNIINYKECMKNHAASIGGHANDGCCEFMPRADD----SLTCAACGCHRNFHRREVR 71
+++P +I YKEC+KNHAA++GG+A DGC EFMP ++ +LTC+ C CHRNFHRRE
Sbjct: 79 KEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSGEEGSIEALTCSVCNCHRNFHRRETE 138
Query: 72 GQ 73
G+
Sbjct: 139 GE 140
Score = 41 (19.5 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 7 PY-KHQRPHPQQEPNIINYK 25
PY H +P PQQ + ++K
Sbjct: 147 PYLNHHQPPPQQRKLMFHHK 166
>TAIR|locus:2121989 [details] [associations]
symbol:HB22 "AT4G24660" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=RCA] [GO:0009740 "gibberellic acid
mediated signaling pathway" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] InterPro:IPR009057 PROSITE:PS00027 PROSITE:PS50071
Pfam:PF04770 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
GO:GO:0009793 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL035356
EMBL:AL161561 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AF439841 EMBL:AY125563
IPI:IPI00528145 PIR:T05568 RefSeq:NP_194197.1 UniGene:At.2543
PDB:1WH7 PDBsum:1WH7 ProteinModelPortal:Q9SB61 SMR:Q9SB61
IntAct:Q9SB61 STRING:Q9SB61 EnsemblPlants:AT4G24660.1 GeneID:828568
KEGG:ath:AT4G24660 TAIR:At4g24660 eggNOG:NOG244803
InParanoid:Q9SB61 OMA:NHAVNIG PhylomeDB:Q9SB61
ProtClustDB:CLSN2915852 EvolutionaryTrace:Q9SB61
Genevestigator:Q9SB61 GermOnline:AT4G24660 Uniprot:Q9SB61
Length = 220
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 87/176 (49%), Positives = 112/176 (63%)
Query: 22 INYKECMKNHAASIGGHANDGCCEFMPRADD----SLTCAACGCHRNFHRRE---VRGQX 74
I Y+EC+KNHA +IGGHA DGCCEFMP +D +L CAACGCHRNFHR+E + G+
Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETESIGGRA 106
Query: 75 XXXXXXXXXFKDPTKLVGAVDRYDE---YDRRSETPEREEVNLNVCPPGNVGPATGKSKR 131
P + G + Y + + + E+ + N P + G G +KR
Sbjct: 107 HRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTS-N---PSSSG---GTTKR 159
Query: 132 QRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHNNKNA 187
RTKFT EQK+KML FAER+GWR+Q+ DDVA+ QFC E GV+R VLK+WMHNNKN+
Sbjct: 160 FRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLKIWMHNNKNS 215
>TAIR|locus:2167052 [details] [associations]
symbol:HB23 "AT5G39760" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR009057 Pfam:PF04770
EMBL:CP002688 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AB016876 InterPro:IPR006455 InterPro:IPR006456 ProDom:PD125774
TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AY091034
EMBL:AY117347 IPI:IPI00522080 RefSeq:NP_568570.1 UniGene:At.9361
SMR:Q9FIW9 IntAct:Q9FIW9 STRING:Q9FIW9 EnsemblPlants:AT5G39760.1
GeneID:833972 KEGG:ath:AT5G39760 TAIR:At5g39760 InParanoid:Q9FIW9
OMA:STAVEYQ ProtClustDB:CLSN2684082 Genevestigator:Q9FIW9
Uniprot:Q9FIW9
Length = 334
Score = 222 (83.2 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 127 GKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHNNKN 186
G KR RTKF+Q QK+KM EFAER+GW+MQ++D+ + FC ++GV + VLKVWMHNNKN
Sbjct: 198 GSRKRFRTKFSQFQKEKMHEFAERVGWKMQKRDEDDVRDFCRQIGVDKSVLKVWMHNNKN 257
Query: 187 ASHRR 191
+RR
Sbjct: 258 TFNRR 262
Score = 209 (78.6 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 39/65 (60%), Positives = 46/65 (70%)
Query: 11 QRPHPQQEPNIINYKECMKNHAASIGGHANDGCCEFMPR----ADD--SLTCAACGCHRN 64
+R H P + YKEC+KNHAA++GGHA DGC EFMP + D SL CAACGCHRN
Sbjct: 43 KRHHHHHHPLLFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRN 102
Query: 65 FHRRE 69
FHRR+
Sbjct: 103 FHRRD 107
>TAIR|locus:2095157 [details] [associations]
symbol:HB34 "AT3G28920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 HOGENOM:HOG000238105
InterPro:IPR006455 InterPro:IPR006456 ProDom:PD125774
TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566 PROSITE:PS51523
ProtClustDB:CLSN2684082 EMBL:AY093171 EMBL:AY128820 EMBL:AP002049
IPI:IPI00528457 RefSeq:NP_189534.1 UniGene:At.19633
UniGene:At.74192 ProteinModelPortal:Q9LHF0 SMR:Q9LHF0 IntAct:Q9LHF0
STRING:Q9LHF0 PaxDb:Q9LHF0 PRIDE:Q9LHF0 ProMEX:Q9LHF0
EnsemblPlants:AT3G28920.1 GeneID:822527 KEGG:ath:AT3G28920
TAIR:At3g28920 eggNOG:NOG250157 InParanoid:Q9LHF0 OMA:KRDEDEV
PhylomeDB:Q9LHF0 ArrayExpress:Q9LHF0 Genevestigator:Q9LHF0
Uniprot:Q9LHF0
Length = 312
Score = 215 (80.7 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 41/76 (53%), Positives = 54/76 (71%)
Query: 113 NLNVCPPGNVGPAT-GKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVG 171
+LN N AT G KR RTKF+ QK+KM EFA+RIGW++Q++D+ + FC E+G
Sbjct: 175 DLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRDEDEVRDFCREIG 234
Query: 172 VKRHVLKVWMHNNKNA 187
V + VLKVWMHNNKN+
Sbjct: 235 VDKGVLKVWMHNNKNS 250
Score = 207 (77.9 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 39/62 (62%), Positives = 42/62 (67%)
Query: 14 HPQQEPNIINYKECMKNHAASIGGHANDGCCEFMPRADD------SLTCAACGCHRNFHR 67
H N + YKEC+KNHAA+IGGHA DGC EFMP SL CAACGCHRNFHR
Sbjct: 42 HHHHNNNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHR 101
Query: 68 RE 69
RE
Sbjct: 102 RE 103
>TAIR|locus:2025121 [details] [associations]
symbol:HB33 "AT1G75240" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003677 "DNA binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0010103 "stomatal complex morphogenesis"
evidence=RCA] InterPro:IPR009057 Pfam:PF04770 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0045893
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC025814 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AY084462 EMBL:BT028894
EMBL:AK229038 IPI:IPI00537666 PIR:G96782 RefSeq:NP_565106.1
UniGene:At.34802 ProteinModelPortal:Q9FRL5 SMR:Q9FRL5 IntAct:Q9FRL5
STRING:Q9FRL5 PRIDE:Q9FRL5 EnsemblPlants:AT1G75240.1 GeneID:843861
KEGG:ath:AT1G75240 TAIR:At1g75240 eggNOG:NOG293842
InParanoid:Q9FRL5 OMA:SHEMIER PhylomeDB:Q9FRL5
ProtClustDB:CLSN2917451 Genevestigator:Q9FRL5 Uniprot:Q9FRL5
Length = 309
Score = 224 (83.9 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 37/61 (60%), Positives = 49/61 (80%)
Query: 126 TGKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHNNK 185
+ KR RTKFT +QK++M++FAE++GWRM +QD+ L +FC E+GVKR V KVWMHNNK
Sbjct: 237 SSSKKRFRTKFTTDQKERMMDFAEKLGWRMNKQDEEELKRFCGEIGVKRQVFKVWMHNNK 296
Query: 186 N 186
N
Sbjct: 297 N 297
Score = 191 (72.3 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 22 INYKECMKNHAASIGGHANDGCCEFMPRADD----SLTCAACGCHRNFHRREVRG 72
+ Y+EC+KNHAAS+GG +DGC EFMP ++ +L CAAC CHRNFHR+E+ G
Sbjct: 74 VRYRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDG 128
>TAIR|locus:2062141 [details] [associations]
symbol:HB24 "AT2G18350" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006439
HOGENOM:HOG000238105 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 UniGene:At.40008 EMBL:AY088255 IPI:IPI00539285
PIR:C84563 RefSeq:NP_565436.1 ProteinModelPortal:Q9ZPW7 SMR:Q9ZPW7
IntAct:Q9ZPW7 STRING:Q9ZPW7 EnsemblPlants:AT2G18350.1 GeneID:816350
KEGG:ath:AT2G18350 TAIR:At2g18350 eggNOG:NOG252042
InParanoid:Q9ZPW7 OMA:KARYREC PhylomeDB:Q9ZPW7
ProtClustDB:CLSN2914944 ArrayExpress:Q9ZPW7 Genevestigator:Q9ZPW7
Uniprot:Q9ZPW7
Length = 262
Score = 223 (83.6 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 40/64 (62%), Positives = 52/64 (81%)
Query: 130 KRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHNNKNASH 189
KR RTKF +EQK+KM+EFAE+IGWRM + +D +N+FC E+ VKR V KVWMHNNK A+
Sbjct: 199 KRFRTKFNEEQKEKMMEFAEKIGWRMTKLEDDEVNRFCREIKVKRQVFKVWMHNNKQAA- 257
Query: 190 RRKD 193
++KD
Sbjct: 258 KKKD 261
Score = 192 (72.6 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 37/76 (48%), Positives = 46/76 (60%)
Query: 1 MDLSLVPYKHQRPHPQQEPNIINYKECMKNHAASIGGHANDGCCEFMPRADD----SLTC 56
+ +S P + RP P Y+EC KNHAAS GGH DGC EFM ++ SL C
Sbjct: 60 ISISHAPRSYARPQTTS-PGKARYRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLC 118
Query: 57 AACGCHRNFHRREVRG 72
AAC CHR+FHR+E+ G
Sbjct: 119 AACDCHRSFHRKEIDG 134
>TAIR|locus:2168240 [details] [associations]
symbol:HB25 "AT5G65410" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR007087 InterPro:IPR009057 PROSITE:PS00027
PROSITE:PS50071 Pfam:PF04770 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AB011479 HOGENOM:HOG000238105 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:BT002385 EMBL:BT006304
IPI:IPI00538649 RefSeq:NP_201344.1 UniGene:At.43744 PDB:1WH5
PDBsum:1WH5 ProteinModelPortal:Q9FKP8 SMR:Q9FKP8 IntAct:Q9FKP8
MINT:MINT-1366403 STRING:Q9FKP8 PRIDE:Q9FKP8
EnsemblPlants:AT5G65410.1 GeneID:836666 KEGG:ath:AT5G65410
TAIR:At5g65410 eggNOG:NOG312041 InParanoid:Q9FKP8 OMA:STESHET
PhylomeDB:Q9FKP8 ProtClustDB:CLSN2916279 EvolutionaryTrace:Q9FKP8
Genevestigator:Q9FKP8 GermOnline:AT5G65410 Uniprot:Q9FKP8
Length = 279
Score = 223 (83.6 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 40/60 (66%), Positives = 47/60 (78%)
Query: 127 GKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHNNKN 186
G KR RTKFT EQK++ML AERIGWR+QRQDD + +FC E GV R VLKVW+HNNK+
Sbjct: 189 GIRKRHRTKFTAEQKERMLALAERIGWRIQRQDDEVIQRFCQETGVPRQVLKVWLHNNKH 248
Score = 181 (68.8 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 24 YKECMKNHAASIGGHANDGCCEFMPRAD----DSLTCAACGCHRNFHRREV 70
++EC+KN A +IGGHA DGC EFMP D+L CAACGCHRNFHR+E+
Sbjct: 75 FRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKEL 125
Score = 38 (18.4 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 6 VPYKHQRPHPQQEP 19
+PY H P PQ +P
Sbjct: 125 LPYFHHAP-PQHQP 137
>TAIR|locus:2026734 [details] [associations]
symbol:ZFHD1 "AT1G69600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0003677 "DNA binding" evidence=ISS;IDA]
[GO:0009414 "response to water deprivation" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009410 "response to xenobiotic stimulus" evidence=RCA]
[GO:0048522 "positive regulation of cellular process" evidence=RCA]
InterPro:IPR009057 PROSITE:PS00027 PROSITE:PS50071 Pfam:PF04770
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC021046
IPI:IPI00536783 PIR:F96717 RefSeq:NP_177118.1 UniGene:At.50017
ProteinModelPortal:Q9SEZ1 SMR:Q9SEZ1 IntAct:Q9SEZ1 STRING:Q9SEZ1
EnsemblPlants:AT1G69600.1 GeneID:843296 KEGG:ath:AT1G69600
TAIR:At1g69600 eggNOG:NOG276809 HOGENOM:HOG000238105
InParanoid:Q9SEZ1 OMA:INGCDEK PhylomeDB:Q9SEZ1
ProtClustDB:CLSN2682563 Genevestigator:Q9SEZ1 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 Uniprot:Q9SEZ1
Length = 242
Score = 195 (73.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 35/56 (62%), Positives = 44/56 (78%)
Query: 130 KRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQFCNEVGVKRHVLKVWMHNNK 185
KR RTKFT EQK KM FAE+ GW++ D+ ++ +FCNEVG++R VLKVWMHNNK
Sbjct: 157 KRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIERGVLKVWMHNNK 212
Score = 192 (72.6 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 36/52 (69%), Positives = 40/52 (76%)
Query: 24 YKECMKNHAASIGGHANDGCCEFMPR-----AD-DSLTCAACGCHRNFHRRE 69
YKEC+KNHAA++GGHA DGC EFMP D SL CAACGCHRNFHRR+
Sbjct: 31 YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRD 82
>TAIR|locus:2077957 [details] [associations]
symbol:HB28 "homeobox protein 28" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001356 InterPro:IPR009057 PROSITE:PS50071 Pfam:PF04770
EMBL:CP002686 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL049862 InterPro:IPR006455
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01565
TIGRFAMs:TIGR01566 PROSITE:PS51523 EMBL:AK175649 IPI:IPI00536721
PIR:T08410 RefSeq:NP_190658.1 UniGene:At.35444
ProteinModelPortal:Q9SVL0 SMR:Q9SVL0 IntAct:Q9SVL0 STRING:Q9SVL0
PRIDE:Q9SVL0 EnsemblPlants:AT3G50890.1 GeneID:824253
KEGG:ath:AT3G50890 TAIR:At3g50890 InParanoid:Q9SVL0 OMA:MISTEVK
PhylomeDB:Q9SVL0 ProtClustDB:CLSN2915369 ArrayExpress:Q9SVL0
Genevestigator:Q9SVL0 Uniprot:Q9SVL0
Length = 249
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 84/214 (39%), Positives = 119/214 (55%)
Query: 1 MDLSLVPYKHQRPHPQQEPNIINYKECMKNHAASIGGHANDGCCEFMPRADD----SLTC 56
M L + ++Q+P + + Y+EC KNHAAS GGH DGCCEFM ++ +L C
Sbjct: 38 MALFPIKKENQKPKTRVDQGA-KYRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKC 96
Query: 57 AACGCHRNFHRREVRG-----QXXXXXXXXXXFKDPTKLVGAVDR-YDEYDRR--SETPE 108
AAC CHR+FHR+EV G Q + + V E RR S + +
Sbjct: 97 AACNCHRSFHRKEVYGHRNSKQDHQLMITPAFYSSNSSYKPRVMHPTGEIGRRTSSSSED 156
Query: 109 REEV----NLNVCPPGNVGPATGKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALN 164
+++ N NV + K KR RTK +EQK+KM EFAER+GWRMQ++D+ ++
Sbjct: 157 MKKILSHRNQNVDGKSLMMMMMRKKKRVRTKINEEQKEKMKEFAERLGWRMQKKDEEEID 216
Query: 165 QFCNEVGVKRHVLKVWMHNNKNASHRRKDESASQ 198
+FC V ++R V KVWMHNNK A +R + + S+
Sbjct: 217 KFCRMVNLRRQVFKVWMHNNKQAM-KRNNSNISE 249
>TAIR|locus:2175138 [details] [associations]
symbol:HB26 "AT5G60480" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002688 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 IPI:IPI00527618 RefSeq:NP_200856.1 UniGene:At.55644
ProteinModelPortal:F4JYZ9 SMR:F4JYZ9 EnsemblPlants:AT5G60480.1
GeneID:836169 KEGG:ath:AT5G60480 Uniprot:F4JYZ9
Length = 191
Score = 195 (73.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 41/94 (43%), Positives = 58/94 (61%)
Query: 107 PEREEVNLNVCPPGNVGPATGKSKRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQF 166
P +EV +V K +RTKFT EQK KM FAER GW++ D+ + +F
Sbjct: 93 PSDQEVKNKFTVERDVRKTAMIKKHKRTKFTAEQKVKMRGFAERAGWKINGWDEKWVREF 152
Query: 167 CNEVGVKRHVLKVWMHNNKNASH-RRKDESASQS 199
C+EVG++R VLKVW+HNNK ++ R +D ++S S
Sbjct: 153 CSEVGIERKVLKVWIHNNKYFNNGRSRDTTSSMS 186
Score = 178 (67.7 bits), Expect = 1.0e-32, Sum P(2) = 1.0e-32
Identities = 32/54 (59%), Positives = 38/54 (70%)
Query: 21 IINYKECMKNHAASIGGHANDGCCEFMPRADDSLT------CAACGCHRNFHRR 68
++ Y EC+KNHA S+GGHA DGC EF P++ LT C ACGCHRNFHRR
Sbjct: 2 VVLYNECLKNHAVSLGGHALDGCGEFTPKSTTILTDPPSLRCDACGCHRNFHRR 55
>TAIR|locus:2165502 [details] [associations]
symbol:HB27 "AT5G42780" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002688 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AB007647 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:BT002832 EMBL:BT004379 IPI:IPI00545267
RefSeq:NP_199092.1 UniGene:At.30152 ProteinModelPortal:Q9FMY7
SMR:Q9FMY7 IntAct:Q9FMY7 STRING:Q9FMY7 PRIDE:Q9FMY7
EnsemblPlants:AT5G42780.1 GeneID:834288 KEGG:ath:AT5G42780
InParanoid:Q9FMY7 OMA:VEEFCVE ProtClustDB:CLSN2916358
ArrayExpress:Q9FMY7 Genevestigator:Q9FMY7 Uniprot:Q9FMY7
Length = 242
Score = 172 (65.6 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 32/50 (64%), Positives = 36/50 (72%)
Query: 23 NYKECMKNHAASIGGHANDGCCEFMPRA--DDSLTCAACGCHRNFHRREV 70
+Y EC KNHAA IG A DGC EF+ +DSL CAACGCHRNFHR E+
Sbjct: 63 HYYECRKNHAADIGTTAYDGCGEFVSSTGEEDSLNCAACGCHRNFHREEL 112
Score = 147 (56.8 bits), Expect = 4.5e-27, Sum P(2) = 4.5e-27
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 120 GNVGPATGKSKRQRTKFTQEQKDKMLEFAERIGWRM--QRQDDVALNQFCNEVGVKRHVL 177
G G KR +TKFT EQ +KM ++AE++ W++ +RQ++V +FC E+GV R
Sbjct: 170 GGAEEEEGIVKRLKTKFTAEQTEKMRDYAEKLRWKVRPERQEEV--EEFCVEIGVNRKNF 227
Query: 178 KVWMHNNKN 186
++WM+N+K+
Sbjct: 228 RIWMNNHKD 236
>TAIR|locus:2150871 [details] [associations]
symbol:HB30 "AT5G15210" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR009057 Pfam:PF04770
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL353993
HOGENOM:HOG000238105 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:BT012195 IPI:IPI00544446 PIR:T49956
RefSeq:NP_197025.1 UniGene:At.27604 SMR:Q9LXG0 IntAct:Q9LXG0
STRING:Q9LXG0 EnsemblPlants:AT5G15210.1 GeneID:831373
KEGG:ath:AT5G15210 TAIR:At5g15210 eggNOG:NOG299019
InParanoid:Q9LXG0 OMA:KEKMFEF ProtClustDB:CLSN2916847
Genevestigator:Q9LXG0 Uniprot:Q9LXG0
Length = 271
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 65/146 (44%), Positives = 77/146 (52%)
Query: 53 SLTCAACGCHRNFHRREVRGQXXXXXXXXXXFKD----------PTKLVGAVDRYDEYDR 102
SLTCAACGCHRNFHRRE F+ P L G + D+ D
Sbjct: 91 SLTCAACGCHRNFHRREEDPSSLSAIVPAIEFRPHNRHQLPPPPPPHLAG-IRSPDDDDS 149
Query: 103 RSETPEREEVNLNVCPPGNVGPATG---KSKRQRTKFTQEQKDKMLEFAERIGWRMQRQD 159
S P L G G T KR RTKF+Q QK+KM EF+ER+GWRM + D
Sbjct: 150 ASPPPISSSYMLLALSGGRGGANTAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKAD 209
Query: 160 DVALNQFCNEVGVKRHVLKVWMHNNK 185
DV + +FC E+GV + V KVWMHNNK
Sbjct: 210 DVVVKEFCREIGVDKSVFKVWMHNNK 235
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 39/55 (70%), Positives = 43/55 (78%)
Query: 21 IINYKECMKNHAASIGGHANDGCCEFMP----RADD--SLTCAACGCHRNFHRRE 69
+ YKEC+KNHAA IGGHA DGC EFMP ++D SLTCAACGCHRNFHRRE
Sbjct: 53 VATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRRE 107
>TAIR|locus:505006123 [details] [associations]
symbol:HB32 "AT1G14687" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS] InterPro:IPR009057
Pfam:PF04770 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC006917
HOGENOM:HOG000238105 InterPro:IPR006455 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01565 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:AY086523 EMBL:BT003942 EMBL:BT005027
IPI:IPI00528506 RefSeq:NP_563956.1 UniGene:At.41958
UniGene:At.74098 ProteinModelPortal:Q9LQW3 SMR:Q9LQW3 IntAct:Q9LQW3
STRING:Q9LQW3 EnsemblPlants:AT1G14687.1 GeneID:838033
KEGG:ath:AT1G14687 TAIR:At1g14687 eggNOG:NOG323861
InParanoid:Q9LQW3 OMA:SYHRRID PhylomeDB:Q9LQW3
ProtClustDB:CLSN2917007 ArrayExpress:Q9LQW3 Genevestigator:Q9LQW3
Uniprot:Q9LQW3
Length = 168
Score = 151 (58.2 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 24 YKECMKNHAASIGGHANDGCCEFMPRADDSLTCAACGCHRNFHRR 68
Y+ECM+NHAA +G +A DGC E+ + L C ACGCHR++HRR
Sbjct: 7 YRECMRNHAAKLGSYAIDGCREYSQPSTGDL-CVACGCHRSYHRR 50
Score = 127 (49.8 bits), Expect = 8.8e-23, Sum P(2) = 8.8e-23
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 130 KRQRTKFTQEQKDKMLEFAERIGWRMQRQDDVALNQ----FCNEVGVKRHVLKVWMHNNK 185
+R+++KFT EQ++ M ++A ++GW ++ D AL + FC +GV R+ K W++NNK
Sbjct: 107 RRRKSKFTAEQREAMKDYAAKLGWTLK--DKRALREEIRVFCEGIGVTRYHFKTWVNNNK 164
Query: 186 NASH 189
H
Sbjct: 165 KFYH 168
>TAIR|locus:4010713452 [details] [associations]
symbol:MIF3 "mini zinc finger 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0048509 "regulation of meristem development" evidence=IMP]
Pfam:PF04770 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0048509
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01566
PROSITE:PS51523 EMBL:DQ217608 IPI:IPI00735059 RefSeq:NP_001077560.1
UniGene:At.68065 EnsemblPlants:AT1G18835.1 GeneID:5007704
KEGG:ath:AT1G18835 TAIR:At1g18835 eggNOG:NOG247086
HOGENOM:HOG000243140 OMA:YSPPNAN PhylomeDB:Q2Q493
ProtClustDB:CLSN2689199 Genevestigator:Q2Q493 Uniprot:Q2Q493
Length = 88
Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 37/50 (74%), Positives = 41/50 (82%)
Query: 22 INYKECMKNHAASIGGHANDGCCEFMPRA-DDSLTCAACGCHRNFHRREV 70
+ Y EC KNHAA+IGG+A DGC EFM DD+LTCAACGCHRNFHRREV
Sbjct: 24 VRYVECQKNHAANIGGYAVDGCREFMASGGDDALTCAACGCHRNFHRREV 73
>TAIR|locus:2019190 [details] [associations]
symbol:MIF1 "AT1G74660" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0007275
"multicellular organismal development" evidence=IMP] [GO:0009640
"photomorphogenesis" evidence=IMP] [GO:0009723 "response to
ethylene stimulus" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=RCA;IMP] [GO:0009735 "response to cytokinin
stimulus" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA;IMP] [GO:0043392 "negative regulation of DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0048509 "regulation
of meristem development" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0016132 "brassinosteroid
biosynthetic process" evidence=RCA] Pfam:PF04770 EMBL:CP002684
GO:GO:0009737 GO:GO:0045892 GO:GO:0009735 GO:GO:0009733
GO:GO:0003677 GO:GO:0009640 GO:GO:0009739 GO:GO:0048509
GO:GO:0009741 EMBL:AC011765 GO:GO:0043392 InterPro:IPR006456
ProDom:PD125774 TIGRFAMs:TIGR01566 PROSITE:PS51523
HOGENOM:HOG000243140 ProtClustDB:CLSN2689199 EMBL:BT024806
IPI:IPI00522381 PIR:G96775 RefSeq:NP_565088.1 UniGene:At.34853
IntAct:Q9CA51 PRIDE:Q9CA51 EnsemblPlants:AT1G74660.1 GeneID:843805
KEGG:ath:AT1G74660 TAIR:At1g74660 InParanoid:Q9CA51 OMA:EISNVRY
PhylomeDB:Q9CA51 Genevestigator:Q9CA51 Uniprot:Q9CA51
Length = 102
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 34/53 (64%), Positives = 39/53 (73%)
Query: 22 INYKECMKNHAASIGGHANDGCCEFMPRAD----DSLTCAACGCHRNFHRREV 70
+ Y EC KNHAA+IGG+A DGC EFM D+L CAACGCHRNFHR+EV
Sbjct: 37 VRYVECQKNHAANIGGYAVDGCREFMAAGVEGTVDALRCAACGCHRNFHRKEV 89
>TAIR|locus:1006230234 [details] [associations]
symbol:MIF2 "mini zinc finger 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISS] Pfam:PF04770 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 EMBL:AP000386
InterPro:IPR006456 ProDom:PD125774 TIGRFAMs:TIGR01566
PROSITE:PS51523 HOGENOM:HOG000243140 EMBL:AY086885 EMBL:BT024663
EMBL:AK221094 IPI:IPI00524925 RefSeq:NP_974373.1 UniGene:At.47938
UniGene:At.68150 PaxDb:Q9LJW5 PRIDE:Q9LJW5
EnsemblPlants:AT3G28917.1 GeneID:2745896 KEGG:ath:AT3G28917
TAIR:At3g28917 eggNOG:NOG241745 InParanoid:Q9LJW5 OMA:TEVVCDC
PhylomeDB:Q9LJW5 ProtClustDB:CLSN2681313 Genevestigator:Q9LJW5
Uniprot:Q9LJW5
Length = 100
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 22 INYKECMKNHAASIGGHANDGCCEFMP-RADD----SLTCAACGCHRNFHRREV 70
+ Y EC KNHAA++GG+A DGC EFM R ++ +LTCAACGCHR+FHRRE+
Sbjct: 31 VRYGECQKNHAAAVGGYAVDGCREFMASRGEEGTVAALTCAACGCHRSFHRREI 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 199 0.00085 111 3 11 22 0.49 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 606 (64 KB)
Total size of DFA: 194 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.99u 0.10s 22.09t Elapsed: 00:00:01
Total cpu time: 21.99u 0.10s 22.09t Elapsed: 00:00:01
Start: Tue May 21 06:10:06 2013 End: Tue May 21 06:10:07 2013