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cmd.read_pdbstr(""""\
EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/09 19:12:37 \
REMARK 6 MODELLER OBJECTIVE FUNCTION: 77.3365 \
REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 8.333 \
ATOM 1 N SER 1 40.161 2.362 -8.060 1.00159.01 N \
ATOM 2 CA SER 1 39.426 3.342 -8.884 1.00159.01 C \
ATOM 3 CB SER 1 38.074 2.739 -9.315 1.00159.01 C \
ATOM 4 OG SER 1 37.275 2.442 -8.178 1.00159.01 O \
ATOM 5 C SER 1 39.216 4.602 -8.107 1.00159.01 C \
ATOM 6 O SER 1 39.608 4.667 -6.942 1.00159.01 O \
ATOM 7 N PRO 2 38.623 5.617 -8.688 1.00317.53 N \
ATOM 8 CA PRO 2 38.153 5.639 -10.050 1.00317.53 C \
ATOM 9 CD PRO 2 38.511 6.911 -8.035 1.00317.53 C \
ATOM 10 CB PRO 2 37.644 7.058 -10.292 1.00317.53 C \
ATOM 11 CG PRO 2 37.496 7.679 -8.890 1.00317.53 C \
ATOM 12 C PRO 2 39.244 5.343 -11.028 1.00317.53 C \
ATOM 13 O PRO 2 39.049 4.519 -11.919 1.00317.53 O \
ATOM 14 N MET 3 40.408 5.992 -10.865 1.00337.99 N \
ATOM 15 CA MET 3 41.489 5.819 -11.782 1.00337.99 C \
ATOM 16 CB MET 3 42.117 4.419 -11.758 1.00337.99 C \
ATOM 17 CG MET 3 43.407 4.336 -12.577 1.00337.99 C \
ATOM 18 SD MET 3 44.521 2.994 -12.071 1.00337.99 S \
ATOM 19 CE MET 3 45.216 3.961 -10.702 1.00337.99 C \
ATOM 20 C MET 3 41.014 6.133 -13.161 1.00337.99 C \
ATOM 21 O MET 3 41.439 5.498 -14.126 1.00337.99 O \
ATOM 22 N PHE 4 40.114 7.131 -13.278 1.00335.68 N \
ATOM 23 CA PHE 4 39.675 7.576 -14.564 1.00335.68 C \
ATOM 24 CB PHE 4 38.640 6.666 -15.272 1.00335.68 C \
ATOM 25 CG PHE 4 37.339 6.559 -14.553 1.00335.68 C \
ATOM 26 CD1 PHE 4 37.180 5.608 -13.573 1.00335.68 C \
ATOM 27 CD2 PHE 4 36.281 7.383 -14.872 1.00335.68 C \
ATOM 28 CE1 PHE 4 35.994 5.475 -12.896 1.00335.68 C \
ATOM 29 CE2 PHE 4 35.087 7.254 -14.201 1.00335.68 C \
ATOM 30 CZ PHE 4 34.942 6.301 -13.216 1.00335.68 C \
ATOM 31 C PHE 4 39.137 8.947 -14.383 1.00335.68 C \
ATOM 32 O PHE 4 39.495 9.629 -13.426 1.00335.68 O \
ATOM 33 N VAL 5 38.266 9.375 -15.318 1.00129.91 N \
ATOM 34 CA VAL 5 37.764 10.715 -15.296 1.00129.91 C \
ATOM 35 CB VAL 5 36.731 11.001 -16.351 1.00129.91 C \
ATOM 36 CG1 VAL 5 35.474 10.163 -16.067 1.00129.91 C \
ATOM 37 CG2 VAL 5 36.475 12.518 -16.390 1.00129.91 C \
ATOM 38 C VAL 5 37.213 11.037 -13.945 1.00129.91 C \
ATOM 39 O VAL 5 36.420 10.303 -13.355 1.00129.91 O \
ATOM 40 N GLY 6 37.665 12.197 -13.442 1.00 40.79 N \
ATOM 41 CA GLY 6 37.382 12.689 -12.133 1.00 40.79 C \
ATOM 42 C GLY 6 38.698 12.720 -11.429 1.00 40.79 C \
ATOM 43 O GLY 6 39.063 13.715 -10.802 1.00 40.79 O \
ATOM 44 N ALA 7 39.472 11.629 -11.547 1.00 99.39 N \
ATOM 45 CA ALA 7 40.766 11.595 -10.940 1.00 99.39 C \
ATOM 46 CB ALA 7 41.478 10.246 -11.116 1.00 99.39 C \
ATOM 47 C ALA 7 41.601 12.626 -11.616 1.00 99.39 C \
ATOM 48 O ALA 7 42.341 13.363 -10.969 1.00 99.39 O \
ATOM 49 N SER 8 41.495 12.689 -12.956 1.00105.72 N \
ATOM 50 CA SER 8 42.219 13.657 -13.721 1.00105.72 C \
ATOM 51 CB SER 8 42.394 13.296 -15.204 1.00105.72 C \
ATOM 52 OG SER 8 43.113 12.076 -15.314 1.00105.72 O \
ATOM 53 C SER 8 41.417 14.904 -13.636 1.00105.72 C \
ATOM 54 O SER 8 40.369 14.932 -12.994 1.00105.72 O \
ATOM 55 N PRO 9 41.864 15.961 -14.235 1.00151.89 N \
ATOM 56 CA PRO 9 41.048 17.120 -14.119 1.00151.89 C \
ATOM 57 CD PRO 9 43.276 16.288 -14.336 1.00151.89 C \
ATOM 58 CB PRO 9 41.903 18.291 -14.594 1.00151.89 C \
ATOM 59 CG PRO 9 43.334 17.826 -14.265 1.00151.89 C \
ATOM 60 C PRO 9 39.753 16.936 -14.832 1.00151.89 C \
ATOM 61 O PRO 9 39.737 16.776 -16.052 1.00151.89 O \
ATOM 62 N ASP 10 38.650 16.987 -14.070 1.00148.69 N \
ATOM 63 CA ASP 10 37.346 16.918 -14.644 1.00148.69 C \
ATOM 64 CB ASP 10 36.476 15.785 -14.088 1.00148.69 C \
ATOM 65 CG ASP 10 36.225 16.110 -12.623 1.00148.69 C \
ATOM 66 OD1 ASP 10 37.227 16.396 -11.921 1.00148.69 O \
ATOM 67 OD2 ASP 10 35.039 16.083 -12.188 1.00148.69 O \
ATOM 68 C ASP 10 36.698 18.163 -14.167 1.00148.69 C \
ATOM 69 O ASP 10 35.499 18.366 -14.342 1.00148.69 O \
ATOM 70 N ALA 11 37.508 19.032 -13.534 1.00 39.30 N \
ATOM 71 CA ALA 11 36.990 20.255 -13.016 1.00 39.30 C \
ATOM 72 CB ALA 11 36.314 20.105 -11.640 1.00 39.30 C \
ATOM 73 C ALA 11 38.137 21.192 -12.848 1.00 39.30 C \
ATOM 74 O ALA 11 39.279 20.782 -12.654 1.00 39.30 O \
ATOM 75 N ARG 12 37.831 22.496 -12.911 1.00124.42 N \
ATOM 76 CA ARG 12 38.790 23.548 -12.787 1.00124.42 C \
ATOM 77 CB ARG 12 39.414 23.674 -11.387 1.00124.42 C \
ATOM 78 CG ARG 12 39.911 25.102 -11.161 1.00124.42 C \
ATOM 79 CD ARG 12 40.295 25.455 -9.725 1.00124.42 C \
ATOM 80 NE ARG 12 40.155 26.938 -9.632 1.00124.42 N \
ATOM 81 CZ ARG 12 41.152 27.779 -10.036 1.00124.42 C \
ATOM 82 NH1 ARG 12 42.353 27.280 -10.452 1.00124.42 N \
ATOM 83 NH2 ARG 12 40.927 29.125 -10.042 1.00124.42 N \
ATOM 84 C ARG 12 39.905 23.358 -13.810 1.00124.42 C \
ATOM 85 O ARG 12 40.986 22.833 -13.436 1.00124.42 O \
ATOM 86 OXT ARG 12 39.687 23.758 -14.987 1.00124.42 O \
TER 87 ARG 12 \
END \
\
""","model_3")
cmd.show_as("cartoon" ,"model_3")
cmd.spectrum(expression="count",selection="model_3_aln",byres=2)