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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/11 12:09:30 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 24.6795 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 0.000 \ ATOM 1 N PHE 1 -29.097 43.574 -45.470 1.00209.84 N \ ATOM 2 CA PHE 1 -29.585 42.472 -46.328 1.00209.84 C \ ATOM 3 CB PHE 1 -30.383 43.047 -47.508 1.00209.84 C \ ATOM 4 CG PHE 1 -29.472 43.872 -48.360 1.00209.84 C \ ATOM 5 CD1 PHE 1 -29.149 45.156 -47.989 1.00209.84 C \ ATOM 6 CD2 PHE 1 -28.954 43.387 -49.542 1.00209.84 C \ ATOM 7 CE1 PHE 1 -28.321 45.932 -48.767 1.00209.84 C \ ATOM 8 CE2 PHE 1 -28.124 44.158 -50.328 1.00209.84 C \ ATOM 9 CZ PHE 1 -27.804 45.438 -49.942 1.00209.84 C \ ATOM 10 C PHE 1 -28.435 41.675 -46.845 1.00209.84 C \ ATOM 11 O PHE 1 -27.278 42.053 -46.670 1.00209.84 O \ ATOM 12 N PRO 2 -28.717 40.550 -47.436 1.00142.96 N \ ATOM 13 CA PRO 2 -30.069 40.081 -47.550 1.00142.96 C \ ATOM 14 CD PRO 2 -27.863 40.017 -48.480 1.00142.96 C \ ATOM 15 CB PRO 2 -30.042 38.966 -48.601 1.00142.96 C \ ATOM 16 CG PRO 2 -28.547 38.696 -48.860 1.00142.96 C \ ATOM 17 C PRO 2 -30.529 39.678 -46.195 1.00142.96 C \ ATOM 18 O PRO 2 -29.714 39.236 -45.387 1.00142.96 O \ ATOM 19 N PRO 3 -31.794 39.822 -45.946 1.00113.95 N \ ATOM 20 CA PRO 3 -32.342 39.490 -44.666 1.00113.95 C \ ATOM 21 CD PRO 3 -32.771 39.671 -47.012 1.00113.95 C \ ATOM 22 CB PRO 3 -33.851 39.588 -44.842 1.00113.95 C \ ATOM 23 CG PRO 3 -34.047 39.173 -46.312 1.00113.95 C \ ATOM 24 C PRO 3 -31.951 38.119 -44.233 1.00113.95 C \ ATOM 25 O PRO 3 -32.193 37.158 -44.963 1.00113.95 O \ ATOM 26 N GLN 4 -31.377 38.008 -43.022 1.00179.37 N \ ATOM 27 CA GLN 4 -31.058 36.716 -42.503 1.00179.37 C \ ATOM 28 CB GLN 4 -30.218 36.768 -41.223 1.00179.37 C \ ATOM 29 CG GLN 4 -28.850 37.408 -41.421 1.00179.37 C \ ATOM 30 CD GLN 4 -28.174 37.461 -40.062 1.00179.37 C \ ATOM 31 OE1 GLN 4 -28.215 36.519 -39.269 1.00179.37 O \ ATOM 32 NE2 GLN 4 -27.526 38.621 -39.779 1.00179.37 N \ ATOM 33 C GLN 4 -32.365 36.138 -42.088 1.00179.37 C \ ATOM 34 O GLN 4 -33.150 36.793 -41.403 1.00179.37 O \ ATOM 35 N SER 5 -32.639 34.884 -42.490 1.00 48.79 N \ ATOM 36 CA SER 5 -33.886 34.324 -42.081 1.00 48.79 C \ ATOM 37 CB SER 5 -34.980 34.345 -43.162 1.00 48.79 C \ ATOM 38 OG SER 5 -34.629 33.507 -44.252 1.00 48.79 O \ ATOM 39 C SER 5 -33.664 32.909 -41.697 1.00 48.79 C \ ATOM 40 O SER 5 -32.650 32.303 -42.038 1.00 48.79 O \ ATOM 41 N SER 6 -34.630 32.354 -40.947 1.00 71.16 N \ ATOM 42 CA SER 6 -34.526 30.998 -40.520 1.00 71.16 C \ ATOM 43 CB SER 6 -35.657 30.597 -39.553 1.00 71.16 C \ ATOM 44 OG SER 6 -35.498 29.244 -39.155 1.00 71.16 O \ ATOM 45 C SER 6 -34.624 30.195 -41.771 1.00 71.16 C \ ATOM 46 O SER 6 -35.229 30.634 -42.745 1.00 71.16 O \ ATOM 47 N SER 7 -34.001 29.005 -41.800 1.00 47.14 N \ ATOM 48 CA SER 7 -34.028 28.238 -43.009 1.00 47.14 C \ ATOM 49 CB SER 7 -32.829 27.275 -43.138 1.00 47.14 C \ ATOM 50 OG SER 7 -32.913 26.545 -44.354 1.00 47.14 O \ ATOM 51 C SER 7 -35.302 27.403 -42.985 1.00 47.14 C \ ATOM 52 O SER 7 -36.100 27.526 -43.949 1.00 47.14 O \ ATOM 53 OXT SER 7 -35.499 26.643 -41.998 1.00 47.14 O \ TER 54 SER 7 \ END \ \ ""","model_3") cmd.show_as("cartoon" ,"model_3") cmd.spectrum(expression="count",selection="model_3_aln",byres=2)