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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/11 14:41:15 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 149.5567 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 31.034 \ ATOM 1 N GLY 1 -10.804 5.759 8.086 1.00 6.82 N \ ATOM 2 CA GLY 1 -9.770 4.849 8.624 1.00 6.82 C \ ATOM 3 C GLY 1 -8.425 5.275 8.145 1.00 6.82 C \ ATOM 4 O GLY 1 -8.227 6.424 7.752 1.00 6.82 O \ ATOM 5 N CYS 2 -7.455 4.344 8.171 1.00 86.00 N \ ATOM 6 CA CYS 2 -6.138 4.676 7.719 1.00 86.00 C \ ATOM 7 CB CYS 2 -5.010 4.058 8.567 1.00 86.00 C \ ATOM 8 SG CYS 2 -5.018 4.584 10.306 1.00 86.00 S \ ATOM 9 C CYS 2 -5.980 4.089 6.358 1.00 86.00 C \ ATOM 10 O CYS 2 -6.271 2.913 6.140 1.00 86.00 O \ ATOM 11 N LYS 3 -5.540 4.912 5.389 1.00 93.61 N \ ATOM 12 CA LYS 3 -5.278 4.373 4.091 1.00 93.61 C \ ATOM 13 CB LYS 3 -6.206 4.908 2.985 1.00 93.61 C \ ATOM 14 CG LYS 3 -7.587 4.246 2.979 1.00 93.61 C \ ATOM 15 CD LYS 3 -8.620 4.969 2.112 1.00 93.61 C \ ATOM 16 CE LYS 3 -9.524 5.918 2.899 1.00 93.61 C \ ATOM 17 NZ LYS 3 -8.742 7.073 3.389 1.00 93.61 N \ ATOM 18 C LYS 3 -3.880 4.746 3.727 1.00 93.61 C \ ATOM 19 O LYS 3 -3.622 5.847 3.244 1.00 93.61 O \ ATOM 20 N ALA 4 -2.933 3.820 3.963 1.00 42.81 N \ ATOM 21 CA ALA 4 -1.572 4.060 3.591 1.00 42.81 C \ ATOM 22 CB ALA 4 -0.560 3.403 4.546 1.00 42.81 C \ ATOM 23 C ALA 4 -1.401 3.437 2.242 1.00 42.81 C \ ATOM 24 O ALA 4 -1.987 2.394 1.959 1.00 42.81 O \ ATOM 25 N GLN 5 -0.606 4.073 1.359 1.00 75.92 N \ ATOM 26 CA GLN 5 -0.429 3.503 0.056 1.00 75.92 C \ ATOM 27 CB GLN 5 -1.016 4.381 -1.064 1.00 75.92 C \ ATOM 28 CG GLN 5 -0.841 3.789 -2.461 1.00 75.92 C \ ATOM 29 CD GLN 5 -1.493 4.735 -3.458 1.00 75.92 C \ ATOM 30 OE1 GLN 5 -0.865 5.160 -4.426 1.00 75.92 O \ ATOM 31 NE2 GLN 5 -2.791 5.069 -3.224 1.00 75.92 N \ ATOM 32 C GLN 5 1.039 3.356 -0.188 1.00 75.92 C \ ATOM 33 O GLN 5 1.820 4.253 0.119 1.00 75.92 O \ ATOM 34 N MET 6 1.456 2.196 -0.736 1.00 99.28 N \ ATOM 35 CA MET 6 2.847 1.973 -1.016 1.00 99.28 C \ ATOM 36 CB MET 6 3.484 0.917 -0.090 1.00 99.28 C \ ATOM 37 CG MET 6 5.006 0.779 -0.200 1.00 99.28 C \ ATOM 38 SD MET 6 5.607 -0.105 -1.667 1.00 99.28 S \ ATOM 39 CE MET 6 5.302 -1.761 -0.996 1.00 99.28 C \ ATOM 40 C MET 6 2.929 1.458 -2.418 1.00 99.28 C \ ATOM 41 O MET 6 2.049 0.724 -2.864 1.00 99.28 O \ ATOM 42 N THR 7 3.983 1.847 -3.164 1.00 29.29 N \ ATOM 43 CA THR 7 4.092 1.377 -4.515 1.00 29.29 C \ ATOM 44 CB THR 7 4.067 2.472 -5.540 1.00 29.29 C \ ATOM 45 OG1 THR 7 2.845 3.193 -5.456 1.00 29.29 O \ ATOM 46 CG2 THR 7 4.219 1.835 -6.932 1.00 29.29 C \ ATOM 47 C THR 7 5.378 0.632 -4.674 1.00 29.29 C \ ATOM 48 O THR 7 6.419 1.044 -4.160 1.00 29.29 O \ ATOM 49 N VAL 8 5.326 -0.505 -5.399 1.00 41.12 N \ ATOM 50 CA VAL 8 6.503 -1.296 -5.605 1.00 41.12 C \ ATOM 51 CB VAL 8 6.275 -2.772 -5.435 1.00 41.12 C \ ATOM 52 CG1 VAL 8 7.563 -3.524 -5.817 1.00 41.12 C \ ATOM 53 CG2 VAL 8 5.801 -3.027 -3.994 1.00 41.12 C \ ATOM 54 C VAL 8 6.947 -1.089 -7.014 1.00 41.12 C \ ATOM 55 O VAL 8 6.258 -1.472 -7.961 1.00 41.12 O \ ATOM 56 N LYS 9 8.128 -0.468 -7.182 1.00117.68 N \ ATOM 57 CA LYS 9 8.660 -0.226 -8.487 1.00117.68 C \ ATOM 58 CB LYS 9 8.793 1.273 -8.807 1.00117.68 C \ ATOM 59 CG LYS 9 9.020 1.580 -10.287 1.00117.68 C \ ATOM 60 CD LYS 9 8.633 3.013 -10.662 1.00117.68 C \ ATOM 61 CE LYS 9 9.607 4.083 -10.170 1.00117.68 C \ ATOM 62 NZ LYS 9 10.493 4.507 -11.277 1.00117.68 N \ ATOM 63 C LYS 9 10.009 -0.858 -8.494 1.00117.68 C \ ATOM 64 O LYS 9 10.659 -0.954 -7.454 1.00117.68 O \ ATOM 65 N LYS 10 10.473 -1.327 -9.665 1.00 63.88 N \ ATOM 66 CA LYS 10 11.722 -2.018 -9.642 1.00 63.88 C \ ATOM 67 CB LYS 10 11.613 -3.433 -10.226 1.00 63.88 C \ ATOM 68 CG LYS 10 10.653 -4.290 -9.399 1.00 63.88 C \ ATOM 69 CD LYS 10 10.145 -5.544 -10.106 1.00 63.88 C \ ATOM 70 CE LYS 10 9.154 -6.346 -9.262 1.00 63.88 C \ ATOM 71 NZ LYS 10 8.527 -7.401 -10.086 1.00 63.88 N \ ATOM 72 C LYS 10 12.738 -1.247 -10.412 1.00 63.88 C \ ATOM 73 O LYS 10 12.438 -0.581 -11.402 1.00 63.88 O \ ATOM 74 N GLN 11 13.993 -1.330 -9.939 1.00187.76 N \ ATOM 75 CA GLN 11 15.099 -0.659 -10.546 1.00187.76 C \ ATOM 76 CB GLN 11 16.413 -0.842 -9.770 1.00187.76 C \ ATOM 77 CG GLN 11 17.545 0.094 -10.207 1.00187.76 C \ ATOM 78 CD GLN 11 18.092 -0.370 -11.551 1.00187.76 C \ ATOM 79 OE1 GLN 11 18.199 0.418 -12.489 1.00187.76 O \ ATOM 80 NE2 GLN 11 18.452 -1.676 -11.654 1.00187.76 N \ ATOM 81 C GLN 11 15.277 -1.266 -11.891 1.00187.76 C \ ATOM 82 O GLN 11 15.684 -0.598 -12.837 1.00187.76 O \ ATOM 83 N GLY 12 14.948 -2.564 -12.011 1.00236.97 N \ ATOM 84 CA GLY 12 15.175 -3.275 -13.231 1.00236.97 C \ ATOM 85 C GLY 12 16.266 -4.229 -12.907 1.00236.97 C \ ATOM 86 O GLY 12 16.586 -5.137 -13.676 1.00236.97 O \ ATOM 87 N SER 13 16.878 -4.022 -11.732 1.00199.64 N \ ATOM 88 CA SER 13 17.860 -4.939 -11.257 1.00199.64 C \ ATOM 89 CB SER 13 19.086 -4.269 -10.616 1.00199.64 C \ ATOM 90 OG SER 13 20.005 -5.255 -10.175 1.00199.64 O \ ATOM 91 C SER 13 17.164 -5.698 -10.186 1.00199.64 C \ ATOM 92 O SER 13 16.272 -5.167 -9.524 1.00199.64 O \ ATOM 93 N GLY 14 17.534 -6.972 -9.995 1.00 76.75 N \ ATOM 94 CA GLY 14 16.888 -7.754 -8.988 1.00 76.75 C \ ATOM 95 C GLY 14 17.168 -7.095 -7.679 1.00 76.75 C \ ATOM 96 O GLY 14 16.344 -7.108 -6.767 1.00 76.75 O \ ATOM 97 N LYS 15 18.377 -6.521 -7.559 1.00138.89 N \ ATOM 98 CA LYS 15 18.851 -5.934 -6.342 1.00138.89 C \ ATOM 99 CB LYS 15 20.326 -5.502 -6.428 1.00138.89 C \ ATOM 100 CG LYS 15 20.564 -4.321 -7.371 1.00138.89 C \ ATOM 101 CD LYS 15 21.951 -3.692 -7.224 1.00138.89 C \ ATOM 102 CE LYS 15 22.931 -4.133 -8.311 1.00138.89 C \ ATOM 103 NZ LYS 15 22.590 -3.474 -9.593 1.00138.89 N \ ATOM 104 C LYS 15 18.068 -4.725 -5.916 1.00138.89 C \ ATOM 105 O LYS 15 17.778 -4.581 -4.730 1.00138.89 O \ ATOM 106 N TRP 16 17.675 -3.824 -6.841 1.00160.79 N \ ATOM 107 CA TRP 16 17.131 -2.600 -6.320 1.00160.79 C \ ATOM 108 CB TRP 16 17.563 -1.353 -7.109 1.00160.79 C \ ATOM 109 CG TRP 16 17.002 -0.059 -6.568 1.00160.79 C \ ATOM 110 CD2 TRP 16 17.676 0.750 -5.593 1.00160.79 C \ ATOM 111 CD1 TRP 16 15.831 0.579 -6.859 1.00160.79 C \ ATOM 112 NE1 TRP 16 15.730 1.734 -6.119 1.00160.79 N \ ATOM 113 CE2 TRP 16 16.861 1.852 -5.337 1.00160.79 C \ ATOM 114 CE3 TRP 16 18.876 0.587 -4.964 1.00160.79 C \ ATOM 115 CZ2 TRP 16 17.236 2.812 -4.440 1.00160.79 C \ ATOM 116 CZ3 TRP 16 19.251 1.557 -4.062 1.00160.79 C \ ATOM 117 CH2 TRP 16 18.448 2.649 -3.804 1.00160.79 C \ ATOM 118 C TRP 16 15.637 -2.615 -6.283 1.00160.79 C \ ATOM 119 O TRP 16 14.956 -2.822 -7.287 1.00160.79 O \ ATOM 120 N ALA 17 15.087 -2.373 -5.079 1.00 44.55 N \ ATOM 121 CA ALA 17 13.669 -2.295 -4.933 1.00 44.55 C \ ATOM 122 CB ALA 17 13.121 -3.217 -3.830 1.00 44.55 C \ ATOM 123 C ALA 17 13.378 -0.897 -4.503 1.00 44.55 C \ ATOM 124 O ALA 17 13.835 -0.447 -3.454 1.00 44.55 O \ ATOM 125 N VAL 18 12.599 -0.160 -5.309 1.00106.44 N \ ATOM 126 CA VAL 18 12.292 1.171 -4.891 1.00106.44 C \ ATOM 127 CB VAL 18 12.457 2.189 -5.989 1.00106.44 C \ ATOM 128 CG1 VAL 18 11.577 1.801 -7.190 1.00106.44 C \ ATOM 129 CG2 VAL 18 12.166 3.586 -5.411 1.00106.44 C \ ATOM 130 C VAL 18 10.877 1.144 -4.423 1.00106.44 C \ ATOM 131 O VAL 18 9.957 0.868 -5.191 1.00106.44 O \ ATOM 132 N SER 19 10.667 1.408 -3.120 1.00 36.68 N \ ATOM 133 CA SER 19 9.328 1.361 -2.614 1.00 36.68 C \ ATOM 134 CB SER 19 9.068 0.152 -1.694 1.00 36.68 C \ ATOM 135 OG SER 19 9.219 -1.060 -2.418 1.00 36.68 O \ ATOM 136 C SER 19 9.110 2.592 -1.806 1.00 36.68 C \ ATOM 137 O SER 19 9.950 2.983 -0.997 1.00 36.68 O \ ATOM 138 N LYS 20 7.961 3.257 -2.001 1.00140.35 N \ ATOM 139 CA LYS 20 7.784 4.433 -1.213 1.00140.35 C \ ATOM 140 CB LYS 20 7.673 5.723 -2.037 1.00140.35 C \ ATOM 141 CG LYS 20 7.959 6.964 -1.197 1.00140.35 C \ ATOM 142 CD LYS 20 9.378 6.950 -0.621 1.00140.35 C \ ATOM 143 CE LYS 20 10.402 6.240 -1.513 1.00140.35 C \ ATOM 144 NZ LYS 20 11.659 6.007 -0.763 1.00140.35 N \ ATOM 145 C LYS 20 6.533 4.276 -0.424 1.00140.35 C \ ATOM 146 O LYS 20 5.537 3.743 -0.910 1.00140.35 O \ ATOM 147 N LEU 21 6.567 4.730 0.842 1.00 42.73 N \ ATOM 148 CA LEU 21 5.399 4.636 1.662 1.00 42.73 C \ ATOM 149 CB LEU 21 5.727 4.380 3.143 1.00 42.73 C \ ATOM 150 CG LEU 21 6.540 3.094 3.393 1.00 42.73 C \ ATOM 151 CD1 LEU 21 6.839 2.915 4.889 1.00 42.73 C \ ATOM 152 CD2 LEU 21 5.870 1.859 2.766 1.00 42.73 C \ ATOM 153 C LEU 21 4.747 5.974 1.574 1.00 42.73 C \ ATOM 154 O LEU 21 5.329 6.989 1.953 1.00 42.73 O \ ATOM 155 N ILE 22 3.501 6.014 1.079 1.00 48.40 N \ ATOM 156 CA ILE 22 2.884 7.293 0.922 1.00 48.40 C \ ATOM 157 CB ILE 22 2.248 7.481 -0.428 1.00 48.40 C \ ATOM 158 CG2 ILE 22 1.535 8.841 -0.453 1.00 48.40 C \ ATOM 159 CG1 ILE 22 3.310 7.357 -1.533 1.00 48.40 C \ ATOM 160 CD1 ILE 22 2.724 7.352 -2.945 1.00 48.40 C \ ATOM 161 C ILE 22 1.838 7.444 1.977 1.00 48.40 C \ ATOM 162 O ILE 22 0.921 6.633 2.099 1.00 48.40 O \ ATOM 163 N LYS 23 1.989 8.509 2.786 1.00143.91 N \ ATOM 164 CA LYS 23 1.080 8.834 3.844 1.00143.91 C \ ATOM 165 CB LYS 23 -0.408 8.528 3.577 1.00143.91 C \ ATOM 166 CG LYS 23 -1.118 9.616 2.764 1.00143.91 C \ ATOM 167 CD LYS 23 -0.657 9.708 1.309 1.00143.91 C \ ATOM 168 CE LYS 23 -1.095 10.990 0.598 1.00143.91 C \ ATOM 169 NZ LYS 23 -0.226 12.115 1.011 1.00143.91 N \ ATOM 170 C LYS 23 1.496 8.144 5.094 1.00143.91 C \ ATOM 171 O LYS 23 2.263 7.182 5.080 1.00143.91 O \ ATOM 172 N GLU 24 1.001 8.671 6.228 1.00 48.43 N \ ATOM 173 CA GLU 24 1.292 8.114 7.510 1.00 48.43 C \ ATOM 174 CB GLU 24 2.139 9.046 8.394 1.00 48.43 C \ ATOM 175 CG GLU 24 3.548 9.253 7.832 1.00 48.43 C \ ATOM 176 CD GLU 24 4.311 10.182 8.764 1.00 48.43 C \ ATOM 177 OE1 GLU 24 4.714 9.712 9.860 1.00 48.43 O \ ATOM 178 OE2 GLU 24 4.502 11.374 8.396 1.00 48.43 O \ ATOM 179 C GLU 24 -0.031 7.877 8.162 1.00 48.43 C \ ATOM 180 O GLU 24 -1.058 8.379 7.705 1.00 48.43 O \ ATOM 181 N HIS 25 -0.042 7.065 9.233 1.00 58.43 N \ ATOM 182 CA HIS 25 -1.278 6.732 9.876 1.00 58.43 C \ ATOM 183 ND1 HIS 25 -1.657 3.495 9.470 1.00 58.43 N \ ATOM 184 CG HIS 25 -0.766 4.293 10.153 1.00 58.43 C \ ATOM 185 CB HIS 25 -1.145 5.561 10.859 1.00 58.43 C \ ATOM 186 NE2 HIS 25 0.340 2.536 9.267 1.00 58.43 N \ ATOM 187 CD2 HIS 25 0.448 3.693 10.019 1.00 58.43 C \ ATOM 188 CE1 HIS 25 -0.943 2.459 8.960 1.00 58.43 C \ ATOM 189 C HIS 25 -1.806 7.921 10.614 1.00 58.43 C \ ATOM 190 O HIS 25 -1.072 8.628 11.302 1.00 58.43 O \ ATOM 191 N ASN 26 -3.116 8.175 10.428 1.00 73.37 N \ ATOM 192 CA ASN 26 -3.868 9.245 11.022 1.00 73.37 C \ ATOM 193 CB ASN 26 -5.182 9.521 10.274 1.00 73.37 C \ ATOM 194 CG ASN 26 -5.951 8.214 10.196 1.00 73.37 C \ ATOM 195 OD1 ASN 26 -5.515 7.291 9.510 1.00 73.37 O \ ATOM 196 ND2 ASN 26 -7.108 8.126 10.905 1.00 73.37 N \ ATOM 197 C ASN 26 -4.190 9.002 12.468 1.00 73.37 C \ ATOM 198 O ASN 26 -4.286 9.951 13.244 1.00 73.37 O \ ATOM 199 N HIS 27 -4.363 7.732 12.881 1.00111.43 N \ ATOM 200 CA HIS 27 -4.852 7.447 14.204 1.00111.43 C \ ATOM 201 ND1 HIS 27 -3.383 4.519 13.094 1.00111.43 N \ ATOM 202 CG HIS 27 -3.675 5.191 14.261 1.00111.43 C \ ATOM 203 CB HIS 27 -4.953 5.939 14.500 1.00111.43 C \ ATOM 204 NE2 HIS 27 -1.631 4.248 14.435 1.00111.43 N \ ATOM 205 CD2 HIS 27 -2.592 5.014 15.068 1.00111.43 C \ ATOM 206 CE1 HIS 27 -2.150 3.975 13.253 1.00111.43 C \ ATOM 207 C HIS 27 -3.975 8.052 15.252 1.00111.43 C \ ATOM 208 O HIS 27 -4.473 8.692 16.177 1.00111.43 O \ ATOM 209 N GLU 28 -2.646 7.893 15.142 1.00211.29 N \ ATOM 210 CA GLU 28 -1.809 8.439 16.170 1.00211.29 C \ ATOM 211 CB GLU 28 -0.331 8.052 16.055 1.00211.29 C \ ATOM 212 CG GLU 28 0.341 8.600 14.797 1.00211.29 C \ ATOM 213 CD GLU 28 1.796 8.164 14.847 1.00211.29 C \ ATOM 214 OE1 GLU 28 2.140 7.384 15.774 1.00211.29 O \ ATOM 215 OE2 GLU 28 2.585 8.605 13.968 1.00211.29 O \ ATOM 216 C GLU 28 -1.871 9.924 16.068 1.00211.29 C \ ATOM 217 O GLU 28 -2.146 10.476 15.005 1.00211.29 O \ ATOM 218 N LEU 29 -1.641 10.610 17.204 1.00 79.26 N \ ATOM 219 CA LEU 29 -1.660 12.040 17.208 1.00 79.26 C \ ATOM 220 CB LEU 29 -1.482 12.640 18.616 1.00 79.26 C \ ATOM 221 CG LEU 29 -2.649 12.350 19.581 1.00 79.26 C \ ATOM 222 CD1 LEU 29 -3.932 13.070 19.139 1.00 79.26 C \ ATOM 223 CD2 LEU 29 -2.849 10.840 19.782 1.00 79.26 C \ ATOM 224 C LEU 29 -0.480 12.497 16.358 1.00 79.26 C \ ATOM 225 O LEU 29 -0.323 13.735 16.178 1.00 79.26 O \ ATOM 226 OXT LEU 29 0.283 11.614 15.882 1.00 79.26 O \ TER 227 LEU 29 \ END \ \ ""","model_1") cmd.show_as("cartoon" ,"model_1") cmd.spectrum(expression="count",selection="model_1_aln",byres=2)