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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/11 22:41:34 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 87.4373 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 19.231 \ ATOM 1 N VAL 1 -7.485 -0.074 -12.932 1.00 20.56 N \ ATOM 2 CA VAL 1 -6.894 -1.352 -13.397 1.00 20.56 C \ ATOM 3 CB VAL 1 -5.403 -1.221 -13.498 1.00 20.56 C \ ATOM 4 CG1 VAL 1 -4.804 -2.594 -13.846 1.00 20.56 C \ ATOM 5 CG2 VAL 1 -5.082 -0.123 -14.528 1.00 20.56 C \ ATOM 6 C VAL 1 -7.220 -2.451 -12.441 1.00 20.56 C \ ATOM 7 O VAL 1 -6.865 -2.394 -11.264 1.00 20.56 O \ ATOM 8 N GLY 2 -7.923 -3.485 -12.939 1.00 14.66 N \ ATOM 9 CA GLY 2 -8.330 -4.587 -12.119 1.00 14.66 C \ ATOM 10 C GLY 2 -7.114 -5.295 -11.624 1.00 14.66 C \ ATOM 11 O GLY 2 -7.056 -5.727 -10.474 1.00 14.66 O \ ATOM 12 N ARG 3 -6.101 -5.414 -12.499 1.00 77.56 N \ ATOM 13 CA ARG 3 -4.906 -6.140 -12.190 1.00 77.56 C \ ATOM 14 CB ARG 3 -3.889 -6.112 -13.339 1.00 77.56 C \ ATOM 15 CG ARG 3 -4.342 -6.909 -14.560 1.00 77.56 C \ ATOM 16 CD ARG 3 -3.449 -6.708 -15.783 1.00 77.56 C \ ATOM 17 NE ARG 3 -3.661 -5.315 -16.260 1.00 77.56 N \ ATOM 18 CZ ARG 3 -3.508 -5.030 -17.584 1.00 77.56 C \ ATOM 19 NH1 ARG 3 -3.147 -6.015 -18.457 1.00 77.56 N \ ATOM 20 NH2 ARG 3 -3.712 -3.758 -18.035 1.00 77.56 N \ ATOM 21 C ARG 3 -4.258 -5.508 -11.005 1.00 77.56 C \ ATOM 22 O ARG 3 -3.759 -6.198 -10.117 1.00 77.56 O \ ATOM 23 N VAL 4 -4.259 -4.168 -10.957 1.00 32.74 N \ ATOM 24 CA VAL 4 -3.621 -3.488 -9.874 1.00 32.74 C \ ATOM 25 CB VAL 4 -3.804 -2.005 -9.961 1.00 32.74 C \ ATOM 26 CG1 VAL 4 -3.320 -1.378 -8.644 1.00 32.74 C \ ATOM 27 CG2 VAL 4 -3.064 -1.489 -11.206 1.00 32.74 C \ ATOM 28 C VAL 4 -4.256 -3.915 -8.592 1.00 32.74 C \ ATOM 29 O VAL 4 -3.567 -4.272 -7.638 1.00 32.74 O \ ATOM 30 N MET 5 -5.599 -3.914 -8.552 1.00 91.41 N \ ATOM 31 CA MET 5 -6.323 -4.206 -7.350 1.00 91.41 C \ ATOM 32 CB MET 5 -7.841 -4.034 -7.538 1.00 91.41 C \ ATOM 33 CG MET 5 -8.634 -4.007 -6.231 1.00 91.41 C \ ATOM 34 SD MET 5 -8.728 -5.589 -5.345 1.00 91.41 S \ ATOM 35 CE MET 5 -9.712 -4.901 -3.981 1.00 91.41 C \ ATOM 36 C MET 5 -6.063 -5.617 -6.921 1.00 91.41 C \ ATOM 37 O MET 5 -5.893 -5.889 -5.733 1.00 91.41 O \ ATOM 38 N SER 6 -6.005 -6.551 -7.886 1.00 31.60 N \ ATOM 39 CA SER 6 -5.864 -7.946 -7.580 1.00 31.60 C \ ATOM 40 CB SER 6 -5.831 -8.824 -8.841 1.00 31.60 C \ ATOM 41 OG SER 6 -4.613 -8.616 -9.539 1.00 31.60 O \ ATOM 42 C SER 6 -4.570 -8.182 -6.864 1.00 31.60 C \ ATOM 43 O SER 6 -4.497 -9.012 -5.960 1.00 31.60 O \ ATOM 44 N ASN 7 -3.516 -7.444 -7.255 1.00 73.40 N \ ATOM 45 CA ASN 7 -2.189 -7.604 -6.727 1.00 73.40 C \ ATOM 46 CB ASN 7 -1.177 -6.690 -7.440 1.00 73.40 C \ ATOM 47 CG ASN 7 0.214 -6.975 -6.895 1.00 73.40 C \ ATOM 48 OD1 ASN 7 0.493 -6.748 -5.720 1.00 73.40 O \ ATOM 49 ND2 ASN 7 1.116 -7.488 -7.776 1.00 73.40 N \ ATOM 50 C ASN 7 -2.167 -7.267 -5.273 1.00 73.40 C \ ATOM 51 O ASN 7 -1.478 -7.912 -4.482 1.00 73.40 O \ ATOM 52 N LEU 8 -2.947 -6.251 -4.879 1.00 52.19 N \ ATOM 53 CA LEU 8 -2.929 -5.771 -3.533 1.00 52.19 C \ ATOM 54 CB LEU 8 -3.921 -4.620 -3.310 1.00 52.19 C \ ATOM 55 CG LEU 8 -3.669 -3.405 -4.224 1.00 52.19 C \ ATOM 56 CD1 LEU 8 -4.582 -2.228 -3.844 1.00 52.19 C \ ATOM 57 CD2 LEU 8 -2.182 -3.027 -4.261 1.00 52.19 C \ ATOM 58 C LEU 8 -3.326 -6.880 -2.615 1.00 52.19 C \ ATOM 59 O LEU 8 -2.762 -7.033 -1.534 1.00 52.19 O \ ATOM 60 N ASN 9 -4.287 -7.714 -3.040 1.00 45.12 N \ ATOM 61 CA ASN 9 -4.824 -8.718 -2.172 1.00 45.12 C \ ATOM 62 CB ASN 9 -5.838 -9.622 -2.886 1.00 45.12 C \ ATOM 63 CG ASN 9 -6.996 -8.765 -3.376 1.00 45.12 C \ ATOM 64 OD1 ASN 9 -7.119 -7.591 -3.029 1.00 45.12 O \ ATOM 65 ND2 ASN 9 -7.880 -9.377 -4.207 1.00 45.12 N \ ATOM 66 C ASN 9 -3.735 -9.615 -1.674 1.00 45.12 C \ ATOM 67 O ASN 9 -3.674 -9.904 -0.481 1.00 45.12 O \ ATOM 68 N ARG 10 -2.835 -10.081 -2.562 1.00 51.31 N \ ATOM 69 CA ARG 10 -1.856 -11.014 -2.079 1.00 51.31 C \ ATOM 70 CB ARG 10 -0.928 -11.591 -3.164 1.00 51.31 C \ ATOM 71 CG ARG 10 -1.565 -12.725 -3.974 1.00 51.31 C \ ATOM 72 CD ARG 10 -0.613 -13.390 -4.973 1.00 51.31 C \ ATOM 73 NE ARG 10 -1.353 -14.512 -5.621 1.00 51.31 N \ ATOM 74 CZ ARG 10 -1.312 -15.764 -5.077 1.00 51.31 C \ ATOM 75 NH1 ARG 10 -0.588 -15.987 -3.940 1.00 51.31 N \ ATOM 76 NH2 ARG 10 -1.985 -16.791 -5.670 1.00 51.31 N \ ATOM 77 C ARG 10 -0.989 -10.398 -1.030 1.00 51.31 C \ ATOM 78 O ARG 10 -0.836 -10.963 0.051 1.00 51.31 O \ ATOM 79 N ALA 11 -0.410 -9.214 -1.298 1.00 34.27 N \ ATOM 80 CA ALA 11 0.460 -8.630 -0.317 1.00 34.27 C \ ATOM 81 CB ALA 11 1.160 -7.350 -0.798 1.00 34.27 C \ ATOM 82 C ALA 11 -0.335 -8.288 0.896 1.00 34.27 C \ ATOM 83 O ALA 11 0.092 -8.553 2.015 1.00 34.27 O \ ATOM 84 N VAL 12 -1.542 -7.732 0.705 1.00 36.08 N \ ATOM 85 CA VAL 12 -2.325 -7.307 1.827 1.00 36.08 C \ ATOM 86 CB VAL 12 -3.667 -6.765 1.438 1.00 36.08 C \ ATOM 87 CG1 VAL 12 -4.488 -6.548 2.720 1.00 36.08 C \ ATOM 88 CG2 VAL 12 -3.463 -5.480 0.619 1.00 36.08 C \ ATOM 89 C VAL 12 -2.562 -8.489 2.709 1.00 36.08 C \ ATOM 90 O VAL 12 -2.552 -8.368 3.932 1.00 36.08 O \ ATOM 91 N VAL 13 -2.808 -9.667 2.111 1.00 26.92 N \ ATOM 92 CA VAL 13 -3.027 -10.843 2.903 1.00 26.92 C \ ATOM 93 CB VAL 13 -3.381 -12.039 2.072 1.00 26.92 C \ ATOM 94 CG1 VAL 13 -3.469 -13.272 2.987 1.00 26.92 C \ ATOM 95 CG2 VAL 13 -4.687 -11.734 1.318 1.00 26.92 C \ ATOM 96 C VAL 13 -1.762 -11.151 3.640 1.00 26.92 C \ ATOM 97 O VAL 13 -1.781 -11.518 4.814 1.00 26.92 O \ ATOM 98 N GLN 14 -0.621 -10.993 2.948 1.00128.72 N \ ATOM 99 CA GLN 14 0.687 -11.261 3.475 1.00128.72 C \ ATOM 100 CB GLN 14 1.797 -11.205 2.414 1.00128.72 C \ ATOM 101 CG GLN 14 1.696 -12.332 1.386 1.00128.72 C \ ATOM 102 CD GLN 14 1.870 -13.653 2.123 1.00128.72 C \ ATOM 103 OE1 GLN 14 1.067 -14.573 1.974 1.00128.72 O \ ATOM 104 NE2 GLN 14 2.952 -13.752 2.944 1.00128.72 N \ ATOM 105 C GLN 14 0.998 -10.269 4.548 1.00128.72 C \ ATOM 106 O GLN 14 1.884 -10.493 5.370 1.00128.72 O \ ATOM 107 N GLU 15 0.283 -9.130 4.551 1.00282.65 N \ ATOM 108 CA GLU 15 0.547 -8.047 5.448 1.00282.65 C \ ATOM 109 CB GLU 15 0.794 -8.503 6.900 1.00282.65 C \ ATOM 110 CG GLU 15 0.979 -7.366 7.902 1.00282.65 C \ ATOM 111 CD GLU 15 -0.394 -6.986 8.441 1.00282.65 C \ ATOM 112 OE1 GLU 15 -1.377 -7.705 8.116 1.00282.65 O \ ATOM 113 OE2 GLU 15 -0.480 -5.976 9.189 1.00282.65 O \ ATOM 114 C GLU 15 1.781 -7.373 4.952 1.00282.65 C \ ATOM 115 O GLU 15 2.443 -6.648 5.694 1.00282.65 O \ ATOM 116 N ARG 16 2.119 -7.599 3.664 1.00212.22 N \ ATOM 117 CA ARG 16 3.207 -6.873 3.081 1.00212.22 C \ ATOM 118 CB ARG 16 4.208 -7.755 2.317 1.00212.22 C \ ATOM 119 CG ARG 16 3.618 -8.619 1.204 1.00212.22 C \ ATOM 120 CD ARG 16 4.625 -9.657 0.694 1.00212.22 C \ ATOM 121 NE ARG 16 3.937 -10.519 -0.305 1.00212.22 N \ ATOM 122 CZ ARG 16 4.478 -11.727 -0.642 1.00212.22 C \ ATOM 123 NH1 ARG 16 5.661 -12.125 -0.087 1.00212.22 N \ ATOM 124 NH2 ARG 16 3.840 -12.541 -1.531 1.00212.22 N \ ATOM 125 C ARG 16 2.603 -5.866 2.159 1.00212.22 C \ ATOM 126 O ARG 16 2.983 -5.720 1.000 1.00212.22 O \ ATOM 127 N TYR 17 1.650 -5.115 2.734 1.00148.95 N \ ATOM 128 CA TYR 17 0.889 -4.062 2.143 1.00148.95 C \ ATOM 129 CB TYR 17 -0.308 -3.611 3.006 1.00148.95 C \ ATOM 130 CG TYR 17 0.219 -3.021 4.264 1.00148.95 C \ ATOM 131 CD1 TYR 17 0.578 -1.694 4.312 1.00148.95 C \ ATOM 132 CD2 TYR 17 0.356 -3.793 5.393 1.00148.95 C \ ATOM 133 CE1 TYR 17 1.068 -1.150 5.473 1.00148.95 C \ ATOM 134 CE2 TYR 17 0.845 -3.253 6.558 1.00148.95 C \ ATOM 135 CZ TYR 17 1.200 -1.926 6.598 1.00148.95 C \ ATOM 136 OH TYR 17 1.702 -1.358 7.788 1.00148.95 O \ ATOM 137 C TYR 17 1.778 -2.888 1.899 1.00148.95 C \ ATOM 138 O TYR 17 1.436 -2.037 1.089 1.00148.95 O \ ATOM 139 N GLU 18 2.898 -2.752 2.640 1.00 90.70 N \ ATOM 140 CA GLU 18 3.681 -1.553 2.497 1.00 90.70 C \ ATOM 141 CB GLU 18 4.993 -1.562 3.309 1.00 90.70 C \ ATOM 142 CG GLU 18 5.986 -2.656 2.901 1.00 90.70 C \ ATOM 143 CD GLU 18 7.361 -2.268 3.432 1.00 90.70 C \ ATOM 144 OE1 GLU 18 7.646 -1.041 3.493 1.00 90.70 O \ ATOM 145 OE2 GLU 18 8.149 -3.191 3.772 1.00 90.70 O \ ATOM 146 C GLU 18 4.063 -1.344 1.064 1.00 90.70 C \ ATOM 147 O GLU 18 3.801 -0.281 0.507 1.00 90.70 O \ ATOM 148 N ASP 19 4.668 -2.345 0.408 1.00 98.25 N \ ATOM 149 CA ASP 19 5.013 -2.170 -0.974 1.00 98.25 C \ ATOM 150 CB ASP 19 5.936 -3.293 -1.482 1.00 98.25 C \ ATOM 151 CG ASP 19 6.277 -3.074 -2.950 1.00 98.25 C \ ATOM 152 OD1 ASP 19 5.365 -3.190 -3.812 1.00 98.25 O \ ATOM 153 OD2 ASP 19 7.472 -2.786 -3.229 1.00 98.25 O \ ATOM 154 C ASP 19 3.775 -2.178 -1.824 1.00 98.25 C \ ATOM 155 O ASP 19 3.629 -1.366 -2.736 1.00 98.25 O \ ATOM 156 N ALA 20 2.849 -3.108 -1.522 1.00 50.07 N \ ATOM 157 CA ALA 20 1.684 -3.390 -2.324 1.00 50.07 C \ ATOM 158 CB ALA 20 0.879 -4.585 -1.785 1.00 50.07 C \ ATOM 159 C ALA 20 0.725 -2.243 -2.404 1.00 50.07 C \ ATOM 160 O ALA 20 0.209 -1.922 -3.474 1.00 50.07 O \ ATOM 161 N ALA 21 0.487 -1.582 -1.268 1.00 43.93 N \ ATOM 162 CA ALA 21 -0.502 -0.564 -1.094 1.00 43.93 C \ ATOM 163 CB ALA 21 -0.505 0.005 0.335 1.00 43.93 C \ ATOM 164 C ALA 21 -0.231 0.560 -2.041 1.00 43.93 C \ ATOM 165 O ALA 21 -1.159 1.171 -2.567 1.00 43.93 O \ ATOM 166 N LEU 22 1.053 0.855 -2.300 1.00 99.85 N \ ATOM 167 CA LEU 22 1.385 1.959 -3.152 1.00 99.85 C \ ATOM 168 CB LEU 22 2.899 2.133 -3.362 1.00 99.85 C \ ATOM 169 CG LEU 22 3.597 2.821 -2.177 1.00 99.85 C \ ATOM 170 CD1 LEU 22 3.383 2.058 -0.863 1.00 99.85 C \ ATOM 171 CD2 LEU 22 5.080 3.070 -2.485 1.00 99.85 C \ ATOM 172 C LEU 22 0.747 1.766 -4.487 1.00 99.85 C \ ATOM 173 O LEU 22 0.326 2.731 -5.121 1.00 99.85 O \ ATOM 174 N LEU 23 0.627 0.511 -4.948 1.00127.43 N \ ATOM 175 CA LEU 23 0.084 0.278 -6.254 1.00127.43 C \ ATOM 176 CB LEU 23 -0.003 -1.221 -6.588 1.00127.43 C \ ATOM 177 CG LEU 23 -0.447 -1.500 -8.031 1.00127.43 C \ ATOM 178 CD1 LEU 23 0.562 -0.936 -9.045 1.00127.43 C \ ATOM 179 CD2 LEU 23 -0.736 -2.992 -8.243 1.00127.43 C \ ATOM 180 C LEU 23 -1.300 0.859 -6.286 1.00127.43 C \ ATOM 181 O LEU 23 -1.723 1.437 -7.284 1.00127.43 O \ ATOM 182 N ARG 24 -2.033 0.745 -5.162 1.00119.70 N \ ATOM 183 CA ARG 24 -3.390 1.205 -5.078 1.00119.70 C \ ATOM 184 CB ARG 24 -4.029 0.938 -3.706 1.00119.70 C \ ATOM 185 CG ARG 24 -5.485 1.397 -3.621 1.00119.70 C \ ATOM 186 CD ARG 24 -6.465 0.488 -4.371 1.00119.70 C \ ATOM 187 NE ARG 24 -6.045 0.432 -5.800 1.00119.70 N \ ATOM 188 CZ ARG 24 -6.413 1.431 -6.653 1.00119.70 C \ ATOM 189 NH1 ARG 24 -7.182 2.459 -6.195 1.00119.70 N \ ATOM 190 NH2 ARG 24 -6.008 1.405 -7.958 1.00119.70 N \ ATOM 191 C ARG 24 -3.469 2.681 -5.316 1.00119.70 C \ ATOM 192 O ARG 24 -4.374 3.155 -6.003 1.00119.70 O \ ATOM 193 N ASP 25 -2.520 3.458 -4.767 1.00 37.78 N \ ATOM 194 CA ASP 25 -2.599 4.880 -4.915 1.00 37.78 C \ ATOM 195 CB ASP 25 -1.414 5.611 -4.261 1.00 37.78 C \ ATOM 196 CG ASP 25 -1.732 7.098 -4.241 1.00 37.78 C \ ATOM 197 OD1 ASP 25 -2.941 7.443 -4.141 1.00 37.78 O \ ATOM 198 OD2 ASP 25 -0.772 7.908 -4.341 1.00 37.78 O \ ATOM 199 C ASP 25 -2.559 5.181 -6.376 1.00 37.78 C \ ATOM 200 O ASP 25 -3.299 6.033 -6.867 1.00 37.78 O \ ATOM 201 N ASN 26 -1.690 4.470 -7.116 1.00 33.73 N \ ATOM 202 CA ASN 26 -1.594 4.701 -8.524 1.00 33.73 C \ ATOM 203 CB ASN 26 -0.504 3.854 -9.198 1.00 33.73 C \ ATOM 204 CG ASN 26 0.834 4.387 -8.713 1.00 33.73 C \ ATOM 205 OD1 ASN 26 1.715 3.638 -8.290 1.00 33.73 O \ ATOM 206 ND2 ASN 26 0.991 5.737 -8.770 1.00 33.73 N \ ATOM 207 C ASN 26 -2.933 4.339 -9.150 1.00 33.73 C \ ATOM 208 O ASN 26 -3.311 3.138 -9.096 1.00 33.73 O \ ATOM 209 OXT ASN 26 -3.597 5.260 -9.695 1.00 33.73 O \ TER 210 ASN 26 \ END \ \ ""","model_2") cmd.show_as("cartoon" ,"model_2") cmd.spectrum(expression="count",selection="model_2_aln",byres=2)