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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/11 15:05:02 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 82.1788 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 34.375 \ ATOM 1 N LYS 1 16.707 20.090 1.973 1.00150.37 N \ ATOM 2 CA LYS 1 16.351 18.843 1.264 1.00150.37 C \ ATOM 3 CB LYS 1 17.478 17.806 1.415 1.00150.37 C \ ATOM 4 CG LYS 1 17.533 17.159 2.801 1.00150.37 C \ ATOM 5 CD LYS 1 17.660 18.171 3.941 1.00150.37 C \ ATOM 6 CE LYS 1 18.913 19.039 3.850 1.00150.37 C \ ATOM 7 NZ LYS 1 18.870 20.091 4.890 1.00150.37 N \ ATOM 8 C LYS 1 15.123 18.281 1.886 1.00150.37 C \ ATOM 9 O LYS 1 14.312 17.642 1.219 1.00150.37 O \ ATOM 10 N LEU 2 14.952 18.531 3.196 1.00 99.07 N \ ATOM 11 CA LEU 2 13.811 18.003 3.870 1.00 99.07 C \ ATOM 12 CB LEU 2 13.995 17.943 5.402 1.00 99.07 C \ ATOM 13 CG LEU 2 12.819 17.342 6.204 1.00 99.07 C \ ATOM 14 CD1 LEU 2 11.584 18.258 6.225 1.00 99.07 C \ ATOM 15 CD2 LEU 2 12.510 15.918 5.718 1.00 99.07 C \ ATOM 16 C LEU 2 12.680 18.925 3.580 1.00 99.07 C \ ATOM 17 O LEU 2 12.758 20.126 3.843 1.00 99.07 O \ ATOM 18 N SER 3 11.594 18.373 3.007 1.00 81.88 N \ ATOM 19 CA SER 3 10.422 19.158 2.756 1.00 81.88 C \ ATOM 20 CB SER 3 9.863 19.015 1.329 1.00 81.88 C \ ATOM 21 OG SER 3 10.794 19.509 0.381 1.00 81.88 O \ ATOM 22 C SER 3 9.385 18.595 3.666 1.00 81.88 C \ ATOM 23 O SER 3 9.303 17.383 3.849 1.00 81.88 O \ ATOM 24 N GLY 4 8.575 19.468 4.290 1.00 14.36 N \ ATOM 25 CA GLY 4 7.583 18.952 5.181 1.00 14.36 C \ ATOM 26 C GLY 4 6.654 18.122 4.363 1.00 14.36 C \ ATOM 27 O GLY 4 6.239 17.038 4.768 1.00 14.36 O \ ATOM 28 N GLY 5 6.310 18.636 3.171 1.00 21.37 N \ ATOM 29 CA GLY 5 5.385 17.981 2.297 1.00 21.37 C \ ATOM 30 C GLY 5 5.962 16.684 1.841 1.00 21.37 C \ ATOM 31 O GLY 5 5.249 15.690 1.719 1.00 21.37 O \ ATOM 32 N ALA 6 7.277 16.664 1.562 1.00 29.99 N \ ATOM 33 CA ALA 6 7.880 15.483 1.019 1.00 29.99 C \ ATOM 34 CB ALA 6 9.381 15.667 0.733 1.00 29.99 C \ ATOM 35 C ALA 6 7.744 14.362 1.995 1.00 29.99 C \ ATOM 36 O ALA 6 7.391 13.244 1.622 1.00 29.99 O \ ATOM 37 N ILE 7 8.025 14.636 3.281 1.00100.73 N \ ATOM 38 CA ILE 7 7.975 13.622 4.293 1.00100.73 C \ ATOM 39 CB ILE 7 8.579 14.074 5.588 1.00100.73 C \ ATOM 40 CG2 ILE 7 10.066 14.326 5.309 1.00100.73 C \ ATOM 41 CG1 ILE 7 7.831 15.283 6.169 1.00100.73 C \ ATOM 42 CD1 ILE 7 8.389 15.749 7.510 1.00100.73 C \ ATOM 43 C ILE 7 6.566 13.170 4.504 1.00100.73 C \ ATOM 44 O ILE 7 6.297 11.978 4.634 1.00100.73 O \ ATOM 45 N ALA 8 5.616 14.115 4.526 1.00 27.63 N \ ATOM 46 CA ALA 8 4.250 13.752 4.751 1.00 27.63 C \ ATOM 47 CB ALA 8 3.301 14.964 4.739 1.00 27.63 C \ ATOM 48 C ALA 8 3.834 12.847 3.636 1.00 27.63 C \ ATOM 49 O ALA 8 3.091 11.890 3.841 1.00 27.63 O \ ATOM 50 N GLY 9 4.299 13.139 2.410 1.00 18.79 N \ ATOM 51 CA GLY 9 3.924 12.363 1.264 1.00 18.79 C \ ATOM 52 C GLY 9 4.410 10.952 1.392 1.00 18.79 C \ ATOM 53 O GLY 9 3.681 10.019 1.061 1.00 18.79 O \ ATOM 54 N ILE 10 5.656 10.746 1.858 1.00111.89 N \ ATOM 55 CA ILE 10 6.142 9.398 1.921 1.00111.89 C \ ATOM 56 CB ILE 10 7.597 9.292 2.299 1.00111.89 C \ ATOM 57 CG2 ILE 10 7.787 9.867 3.712 1.00111.89 C \ ATOM 58 CG1 ILE 10 8.077 7.836 2.152 1.00111.89 C \ ATOM 59 CD1 ILE 10 8.045 7.322 0.713 1.00111.89 C \ ATOM 60 C ILE 10 5.330 8.615 2.901 1.00111.89 C \ ATOM 61 O ILE 10 4.938 7.483 2.621 1.00111.89 O \ ATOM 62 N VAL 11 5.047 9.202 4.079 1.00 81.63 N \ ATOM 63 CA VAL 11 4.318 8.490 5.087 1.00 81.63 C \ ATOM 64 CB VAL 11 4.177 9.236 6.389 1.00 81.63 C \ ATOM 65 CG1 VAL 11 3.307 10.485 6.180 1.00 81.63 C \ ATOM 66 CG2 VAL 11 3.585 8.268 7.427 1.00 81.63 C \ ATOM 67 C VAL 11 2.943 8.181 4.591 1.00 81.63 C \ ATOM 68 O VAL 11 2.443 7.080 4.807 1.00 81.63 O \ ATOM 69 N ILE 12 2.291 9.137 3.901 1.00 80.49 N \ ATOM 70 CA ILE 12 0.933 8.891 3.510 1.00 80.49 C \ ATOM 71 CB ILE 12 0.281 10.082 2.854 1.00 80.49 C \ ATOM 72 CG2 ILE 12 1.016 10.416 1.550 1.00 80.49 C \ ATOM 73 CG1 ILE 12 -1.226 9.835 2.667 1.00 80.49 C \ ATOM 74 CD1 ILE 12 -1.998 11.083 2.241 1.00 80.49 C \ ATOM 75 C ILE 12 0.870 7.718 2.578 1.00 80.49 C \ ATOM 76 O ILE 12 0.063 6.810 2.773 1.00 80.49 O \ ATOM 77 N GLY 13 1.733 7.690 1.544 1.00 21.87 N \ ATOM 78 CA GLY 13 1.720 6.604 0.606 1.00 21.87 C \ ATOM 79 C GLY 13 2.159 5.345 1.285 1.00 21.87 C \ ATOM 80 O GLY 13 1.596 4.274 1.068 1.00 21.87 O \ ATOM 81 N SER 14 3.201 5.443 2.128 1.00 32.33 N \ ATOM 82 CA SER 14 3.742 4.274 2.755 1.00 32.33 C \ ATOM 83 CB SER 14 4.987 4.573 3.608 1.00 32.33 C \ ATOM 84 OG SER 14 6.062 4.976 2.770 1.00 32.33 O \ ATOM 85 C SER 14 2.720 3.646 3.646 1.00 32.33 C \ ATOM 86 O SER 14 2.456 2.451 3.539 1.00 32.33 O \ ATOM 87 N VAL 15 2.097 4.436 4.542 1.00 89.06 N \ ATOM 88 CA VAL 15 1.176 3.834 5.461 1.00 89.06 C \ ATOM 89 CB VAL 15 0.641 4.795 6.483 1.00 89.06 C \ ATOM 90 CG1 VAL 15 1.822 5.265 7.347 1.00 89.06 C \ ATOM 91 CG2 VAL 15 -0.113 5.937 5.782 1.00 89.06 C \ ATOM 92 C VAL 15 0.021 3.239 4.717 1.00 89.06 C \ ATOM 93 O VAL 15 -0.325 2.078 4.932 1.00 89.06 O \ ATOM 94 N ILE 16 -0.588 3.998 3.790 1.00 89.48 N \ ATOM 95 CA ILE 16 -1.731 3.495 3.089 1.00 89.48 C \ ATOM 96 CB ILE 16 -2.381 4.489 2.169 1.00 89.48 C \ ATOM 97 CG2 ILE 16 -2.932 5.648 3.010 1.00 89.48 C \ ATOM 98 CG1 ILE 16 -1.394 4.914 1.073 1.00 89.48 C \ ATOM 99 CD1 ILE 16 -2.059 5.621 -0.105 1.00 89.48 C \ ATOM 100 C ILE 16 -1.328 2.330 2.248 1.00 89.48 C \ ATOM 101 O ILE 16 -2.031 1.327 2.187 1.00 89.48 O \ ATOM 102 N GLY 17 -0.177 2.414 1.566 1.00 35.69 N \ ATOM 103 CA GLY 17 0.133 1.366 0.640 1.00 35.69 C \ ATOM 104 C GLY 17 0.275 0.032 1.312 1.00 35.69 C \ ATOM 105 O GLY 17 -0.390 -0.928 0.928 1.00 35.69 O \ ATOM 106 N PHE 18 1.135 -0.069 2.343 1.00 44.97 N \ ATOM 107 CA PHE 18 1.380 -1.341 2.965 1.00 44.97 C \ ATOM 108 CB PHE 18 2.548 -1.296 3.968 1.00 44.97 C \ ATOM 109 CG PHE 18 3.781 -0.966 3.199 1.00 44.97 C \ ATOM 110 CD1 PHE 18 4.145 0.347 3.011 1.00 44.97 C \ ATOM 111 CD2 PHE 18 4.566 -1.956 2.652 1.00 44.97 C \ ATOM 112 CE1 PHE 18 5.278 0.669 2.303 1.00 44.97 C \ ATOM 113 CE2 PHE 18 5.701 -1.643 1.942 1.00 44.97 C \ ATOM 114 CZ PHE 18 6.056 -0.328 1.764 1.00 44.97 C \ ATOM 115 C PHE 18 0.170 -1.798 3.713 1.00 44.97 C \ ATOM 116 O PHE 18 -0.258 -2.941 3.587 1.00 44.97 O \ ATOM 117 N LEU 19 -0.435 -0.897 4.502 1.00 45.07 N \ ATOM 118 CA LEU 19 -1.506 -1.303 5.359 1.00 45.07 C \ ATOM 119 CB LEU 19 -1.980 -0.159 6.264 1.00 45.07 C \ ATOM 120 CG LEU 19 -0.851 0.355 7.178 1.00 45.07 C \ ATOM 121 CD1 LEU 19 -1.367 1.395 8.185 1.00 45.07 C \ ATOM 122 CD2 LEU 19 -0.094 -0.806 7.846 1.00 45.07 C \ ATOM 123 C LEU 19 -2.661 -1.801 4.549 1.00 45.07 C \ ATOM 124 O LEU 19 -3.235 -2.845 4.849 1.00 45.07 O \ ATOM 125 N LEU 20 -3.022 -1.076 3.477 1.00 96.59 N \ ATOM 126 CA LEU 20 -4.138 -1.457 2.662 1.00 96.59 C \ ATOM 127 CB LEU 20 -4.429 -0.445 1.540 1.00 96.59 C \ ATOM 128 CG LEU 20 -5.202 0.805 2.001 1.00 96.59 C \ ATOM 129 CD1 LEU 20 -4.555 1.458 3.229 1.00 96.59 C \ ATOM 130 CD2 LEU 20 -5.376 1.806 0.847 1.00 96.59 C \ ATOM 131 C LEU 20 -3.865 -2.775 2.020 1.00 96.59 C \ ATOM 132 O LEU 20 -4.758 -3.614 1.925 1.00 96.59 O \ ATOM 133 N ILE 21 -2.624 -3.003 1.558 1.00 83.10 N \ ATOM 134 CA ILE 21 -2.365 -4.232 0.867 1.00 83.10 C \ ATOM 135 CB ILE 21 -0.991 -4.307 0.251 1.00 83.10 C \ ATOM 136 CG2 ILE 21 0.064 -4.470 1.348 1.00 83.10 C \ ATOM 137 CG1 ILE 21 -0.934 -5.428 -0.794 1.00 83.10 C \ ATOM 138 CD1 ILE 21 0.343 -5.391 -1.632 1.00 83.10 C \ ATOM 139 C ILE 21 -2.545 -5.386 1.804 1.00 83.10 C \ ATOM 140 O ILE 21 -3.139 -6.404 1.451 1.00 83.10 O \ ATOM 141 N LEU 22 -2.056 -5.247 3.045 1.00 92.30 N \ ATOM 142 CA LEU 22 -2.115 -6.310 4.006 1.00 92.30 C \ ATOM 143 CB LEU 22 -1.475 -5.896 5.346 1.00 92.30 C \ ATOM 144 CG LEU 22 -1.198 -7.037 6.353 1.00 92.30 C \ ATOM 145 CD1 LEU 22 -0.585 -6.468 7.638 1.00 92.30 C \ ATOM 146 CD2 LEU 22 -2.413 -7.940 6.625 1.00 92.30 C \ ATOM 147 C LEU 22 -3.561 -6.612 4.257 1.00 92.30 C \ ATOM 148 O LEU 22 -3.955 -7.773 4.359 1.00 92.30 O \ ATOM 149 N LEU 23 -4.399 -5.566 4.346 1.00126.25 N \ ATOM 150 CA LEU 23 -5.783 -5.760 4.676 1.00126.25 C \ ATOM 151 CB LEU 23 -6.554 -4.442 4.857 1.00126.25 C \ ATOM 152 CG LEU 23 -8.025 -4.666 5.258 1.00126.25 C \ ATOM 153 CD1 LEU 23 -8.117 -5.460 6.571 1.00126.25 C \ ATOM 154 CD2 LEU 23 -8.807 -3.340 5.318 1.00126.25 C \ ATOM 155 C LEU 23 -6.463 -6.557 3.608 1.00126.25 C \ ATOM 156 O LEU 23 -7.281 -7.428 3.898 1.00126.25 O \ ATOM 157 N ILE 24 -6.124 -6.295 2.336 1.00 46.79 N \ ATOM 158 CA ILE 24 -6.763 -6.966 1.244 1.00 46.79 C \ ATOM 159 CB ILE 24 -6.140 -6.576 -0.066 1.00 46.79 C \ ATOM 160 CG2 ILE 24 -6.841 -7.352 -1.190 1.00 46.79 C \ ATOM 161 CG1 ILE 24 -6.188 -5.047 -0.238 1.00 46.79 C \ ATOM 162 CD1 ILE 24 -5.234 -4.525 -1.312 1.00 46.79 C \ ATOM 163 C ILE 24 -6.510 -8.427 1.441 1.00 46.79 C \ ATOM 164 O ILE 24 -7.394 -9.265 1.275 1.00 46.79 O \ ATOM 165 N LEU 25 -5.272 -8.765 1.835 1.00 90.73 N \ ATOM 166 CA LEU 25 -4.909 -10.139 2.016 1.00 90.73 C \ ATOM 167 CB LEU 25 -3.424 -10.297 2.408 1.00 90.73 C \ ATOM 168 CG LEU 25 -2.834 -11.726 2.319 1.00 90.73 C \ ATOM 169 CD1 LEU 25 -1.354 -11.731 2.738 1.00 90.73 C \ ATOM 170 CD2 LEU 25 -3.667 -12.772 3.073 1.00 90.73 C \ ATOM 171 C LEU 25 -5.764 -10.702 3.116 1.00 90.73 C \ ATOM 172 O LEU 25 -6.240 -11.833 3.028 1.00 90.73 O \ ATOM 173 N LEU 26 -6.003 -9.914 4.181 1.00 49.98 N \ ATOM 174 CA LEU 26 -6.770 -10.396 5.297 1.00 49.98 C \ ATOM 175 CB LEU 26 -6.853 -9.406 6.473 1.00 49.98 C \ ATOM 176 CG LEU 26 -7.566 -9.999 7.706 1.00 49.98 C \ ATOM 177 CD1 LEU 26 -6.741 -11.135 8.334 1.00 49.98 C \ ATOM 178 CD2 LEU 26 -7.943 -8.909 8.720 1.00 49.98 C \ ATOM 179 C LEU 26 -8.177 -10.676 4.863 1.00 49.98 C \ ATOM 180 O LEU 26 -8.783 -11.644 5.321 1.00 49.98 O \ ATOM 181 N ILE 27 -8.750 -9.829 3.980 1.00136.48 N \ ATOM 182 CA ILE 27 -10.114 -10.037 3.574 1.00136.48 C \ ATOM 183 CB ILE 27 -10.728 -8.927 2.746 1.00136.48 C \ ATOM 184 CG2 ILE 27 -10.683 -7.664 3.620 1.00136.48 C \ ATOM 185 CG1 ILE 27 -10.087 -8.743 1.353 1.00136.48 C \ ATOM 186 CD1 ILE 27 -10.501 -9.783 0.313 1.00136.48 C \ ATOM 187 C ILE 27 -10.211 -11.318 2.815 1.00136.48 C \ ATOM 188 O ILE 27 -11.181 -12.060 2.957 1.00136.48 O \ ATOM 189 N LEU 28 -9.189 -11.627 1.999 1.00128.56 N \ ATOM 190 CA LEU 28 -9.245 -12.781 1.153 1.00128.56 C \ ATOM 191 CB LEU 28 -7.940 -12.975 0.358 1.00128.56 C \ ATOM 192 CG LEU 28 -7.954 -14.199 -0.574 1.00128.56 C \ ATOM 193 CD1 LEU 28 -9.025 -14.069 -1.661 1.00128.56 C \ ATOM 194 CD2 LEU 28 -6.563 -14.476 -1.170 1.00128.56 C \ ATOM 195 C LEU 28 -9.465 -13.991 2.006 1.00128.56 C \ ATOM 196 O LEU 28 -10.289 -14.844 1.689 1.00128.56 O \ ATOM 197 N CYS 29 -8.743 -14.082 3.133 1.00132.59 N \ ATOM 198 CA CYS 29 -8.909 -15.203 4.005 1.00132.59 C \ ATOM 199 CB CYS 29 -7.634 -15.572 4.779 1.00132.59 C \ ATOM 200 SG CYS 29 -6.273 -16.093 3.695 1.00132.59 S \ ATOM 201 C CYS 29 -9.925 -14.799 5.014 1.00132.59 C \ ATOM 202 O CYS 29 -11.108 -14.660 4.698 1.00132.59 O \ ATOM 203 N ARG 30 -9.490 -14.623 6.275 1.00332.20 N \ ATOM 204 CA ARG 30 -10.420 -14.255 7.298 1.00332.20 C \ ATOM 205 CB ARG 30 -10.758 -15.430 8.223 1.00332.20 C \ ATOM 206 CG ARG 30 -11.542 -16.532 7.513 1.00332.20 C \ ATOM 207 CD ARG 30 -11.280 -17.918 8.096 1.00332.20 C \ ATOM 208 NE ARG 30 -9.866 -18.249 7.754 1.00332.20 N \ ATOM 209 CZ ARG 30 -9.436 -19.544 7.763 1.00332.20 C \ ATOM 210 NH1 ARG 30 -10.296 -20.546 8.121 1.00332.20 N \ ATOM 211 NH2 ARG 30 -8.153 -19.838 7.409 1.00332.20 N \ ATOM 212 C ARG 30 -9.794 -13.205 8.150 1.00332.20 C \ ATOM 213 O ARG 30 -8.576 -13.172 8.334 1.00332.20 O \ ATOM 214 N LYS 31 -10.629 -12.303 8.697 1.00221.94 N \ ATOM 215 CA LYS 31 -10.106 -11.286 9.558 1.00221.94 C \ ATOM 216 CB LYS 31 -11.189 -10.376 10.167 1.00221.94 C \ ATOM 217 CG LYS 31 -12.080 -9.677 9.138 1.00221.94 C \ ATOM 218 CD LYS 31 -11.316 -8.813 8.139 1.00221.94 C \ ATOM 219 CE LYS 31 -12.235 -8.129 7.128 1.00221.94 C \ ATOM 220 NZ LYS 31 -13.000 -9.151 6.380 1.00221.94 N \ ATOM 221 C LYS 31 -9.503 -12.020 10.703 1.00221.94 C \ ATOM 222 O LYS 31 -8.387 -11.730 11.130 1.00221.94 O \ ATOM 223 N LYS 32 -10.253 -13.010 11.221 1.00 92.74 N \ ATOM 224 CA LYS 32 -9.768 -13.828 12.289 1.00 92.74 C \ ATOM 225 CB LYS 32 -10.772 -13.996 13.451 1.00 92.74 C \ ATOM 226 CG LYS 32 -11.071 -12.711 14.235 1.00 92.74 C \ ATOM 227 CD LYS 32 -11.975 -11.720 13.504 1.00 92.74 C \ ATOM 228 CE LYS 32 -12.232 -10.429 14.285 1.00 92.74 C \ ATOM 229 NZ LYS 32 -12.732 -10.747 15.639 1.00 92.74 N \ ATOM 230 C LYS 32 -9.550 -15.209 11.670 1.00 92.74 C \ ATOM 231 O LYS 32 -10.547 -15.816 11.196 1.00 92.74 O \ ATOM 232 OXT LYS 32 -8.381 -15.672 11.657 1.00 92.74 O \ TER 233 LYS 32 \ END \ \ ""","model_5") cmd.show_as("cartoon" ,"model_5") cmd.spectrum(expression="count",selection="model_5_aln",byres=2)