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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/10 07:52:23 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 37.3517 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 33.333 \ ATOM 1 N PHE 1 -13.972 32.425 -17.569 1.00 25.49 N \ ATOM 2 CA PHE 1 -13.429 33.235 -16.453 1.00 25.49 C \ ATOM 3 CB PHE 1 -14.562 33.947 -15.691 1.00 25.49 C \ ATOM 4 CG PHE 1 -13.918 34.716 -14.582 1.00 25.49 C \ ATOM 5 CD1 PHE 1 -13.338 35.944 -14.797 1.00 25.49 C \ ATOM 6 CD2 PHE 1 -13.893 34.189 -13.308 1.00 25.49 C \ ATOM 7 CE1 PHE 1 -12.753 36.622 -13.748 1.00 25.49 C \ ATOM 8 CE2 PHE 1 -13.310 34.860 -12.259 1.00 25.49 C \ ATOM 9 CZ PHE 1 -12.733 36.086 -12.481 1.00 25.49 C \ ATOM 10 C PHE 1 -12.689 32.373 -15.492 1.00 25.49 C \ ATOM 11 O PHE 1 -11.512 32.598 -15.211 1.00 25.49 O \ ATOM 12 N LEU 2 -13.380 31.352 -14.961 1.00 80.21 N \ ATOM 13 CA LEU 2 -12.778 30.479 -14.001 1.00 80.21 C \ ATOM 14 CB LEU 2 -13.740 29.427 -13.433 1.00 80.21 C \ ATOM 15 CG LEU 2 -15.060 30.029 -12.938 1.00 80.21 C \ ATOM 16 CD1 LEU 2 -14.809 31.192 -11.964 1.00 80.21 C \ ATOM 17 CD2 LEU 2 -15.978 30.382 -14.119 1.00 80.21 C \ ATOM 18 C LEU 2 -11.689 29.715 -14.675 1.00 80.21 C \ ATOM 19 O LEU 2 -10.625 29.493 -14.101 1.00 80.21 O \ ATOM 20 N ARG 3 -11.940 29.298 -15.930 1.00139.22 N \ ATOM 21 CA ARG 3 -11.032 28.481 -16.678 1.00139.22 C \ ATOM 22 CB ARG 3 -11.584 28.101 -18.071 1.00139.22 C \ ATOM 23 CG ARG 3 -12.783 27.139 -18.040 1.00139.22 C \ ATOM 24 CD ARG 3 -13.336 26.762 -19.423 1.00139.22 C \ ATOM 25 NE ARG 3 -12.262 26.056 -20.173 1.00139.22 N \ ATOM 26 CZ ARG 3 -12.582 25.191 -21.179 1.00139.22 C \ ATOM 27 NH1 ARG 3 -13.890 24.966 -21.505 1.00139.22 N \ ATOM 28 NH2 ARG 3 -11.596 24.540 -21.865 1.00139.22 N \ ATOM 29 C ARG 3 -9.752 29.225 -16.882 1.00139.22 C \ ATOM 30 O ARG 3 -8.678 28.622 -16.837 1.00139.22 O \ ATOM 31 N ARG 4 -9.830 30.553 -17.097 1.00 99.17 N \ ATOM 32 CA ARG 4 -8.623 31.260 -17.413 1.00 99.17 C \ ATOM 33 CB ARG 4 -8.807 32.781 -17.612 1.00 99.17 C \ ATOM 34 CG ARG 4 -9.200 33.564 -16.355 1.00 99.17 C \ ATOM 35 CD ARG 4 -9.272 35.068 -16.618 1.00 99.17 C \ ATOM 36 NE ARG 4 -9.067 35.761 -15.317 1.00 99.17 N \ ATOM 37 CZ ARG 4 -9.795 36.876 -15.021 1.00 99.17 C \ ATOM 38 NH1 ARG 4 -10.790 37.284 -15.862 1.00 99.17 N \ ATOM 39 NH2 ARG 4 -9.518 37.588 -13.889 1.00 99.17 N \ ATOM 40 C ARG 4 -7.661 31.093 -16.279 1.00 99.17 C \ ATOM 41 O ARG 4 -6.500 30.741 -16.489 1.00 99.17 O \ ATOM 42 N LYS 5 -8.119 31.315 -15.036 1.00 94.64 N \ ATOM 43 CA LYS 5 -7.231 31.137 -13.930 1.00 94.64 C \ ATOM 44 CB LYS 5 -7.888 31.388 -12.560 1.00 94.64 C \ ATOM 45 CG LYS 5 -8.351 32.821 -12.299 1.00 94.64 C \ ATOM 46 CD LYS 5 -9.318 32.908 -11.116 1.00 94.64 C \ ATOM 47 CE LYS 5 -9.614 34.339 -10.674 1.00 94.64 C \ ATOM 48 NZ LYS 5 -10.018 35.146 -11.845 1.00 94.64 N \ ATOM 49 C LYS 5 -6.891 29.691 -13.951 1.00 94.64 C \ ATOM 50 O LYS 5 -5.734 29.300 -13.806 1.00 94.64 O \ ATOM 51 N ALA 6 -7.931 28.863 -14.162 1.00204.21 N \ ATOM 52 CA ALA 6 -7.793 27.440 -14.199 1.00204.21 C \ ATOM 53 CB ALA 6 -6.866 26.926 -15.311 1.00204.21 C \ ATOM 54 C ALA 6 -7.242 27.000 -12.891 1.00204.21 C \ ATOM 55 O ALA 6 -6.667 25.917 -12.781 1.00204.21 O \ ATOM 56 N LYS 7 -7.407 27.826 -11.848 1.00 77.44 N \ ATOM 57 CA LYS 7 -6.948 27.362 -10.584 1.00 77.44 C \ ATOM 58 CB LYS 7 -6.369 28.473 -9.686 1.00 77.44 C \ ATOM 59 CG LYS 7 -5.031 28.999 -10.219 1.00 77.44 C \ ATOM 60 CD LYS 7 -4.580 30.330 -9.614 1.00 77.44 C \ ATOM 61 CE LYS 7 -3.357 30.919 -10.324 1.00 77.44 C \ ATOM 62 NZ LYS 7 -3.057 32.259 -9.779 1.00 77.44 N \ ATOM 63 C LYS 7 -8.161 26.773 -9.962 1.00 77.44 C \ ATOM 64 O LYS 7 -9.218 27.402 -9.935 1.00 77.44 O \ ATOM 65 N LYS 8 -8.049 25.523 -9.476 1.00 84.88 N \ ATOM 66 CA LYS 8 -9.214 24.893 -8.944 1.00 84.88 C \ ATOM 67 CB LYS 8 -8.960 23.463 -8.446 1.00 84.88 C \ ATOM 68 CG LYS 8 -8.552 22.517 -9.576 1.00 84.88 C \ ATOM 69 CD LYS 8 -8.056 21.167 -9.068 1.00 84.88 C \ ATOM 70 CE LYS 8 -6.747 21.263 -8.285 1.00 84.88 C \ ATOM 71 NZ LYS 8 -6.873 20.548 -6.993 1.00 84.88 N \ ATOM 72 C LYS 8 -9.681 25.741 -7.814 1.00 84.88 C \ ATOM 73 O LYS 8 -8.884 26.180 -6.986 1.00 84.88 O \ ATOM 74 N LYS 9 -11.007 25.990 -7.794 1.00 64.92 N \ ATOM 75 CA LYS 9 -11.634 26.864 -6.854 1.00 64.92 C \ ATOM 76 CB LYS 9 -11.866 26.268 -5.456 1.00 64.92 C \ ATOM 77 CG LYS 9 -12.999 25.246 -5.504 1.00 64.92 C \ ATOM 78 CD LYS 9 -13.345 24.570 -4.180 1.00 64.92 C \ ATOM 79 CE LYS 9 -14.726 24.979 -3.655 1.00 64.92 C \ ATOM 80 NZ LYS 9 -15.247 23.926 -2.758 1.00 64.92 N \ ATOM 81 C LYS 9 -10.792 28.119 -6.726 1.00 64.92 C \ ATOM 82 O LYS 9 -10.165 28.294 -5.651 1.00 64.92 O \ ATOM 83 OXT LYS 9 -10.768 28.912 -7.707 1.00 64.92 O \ TER 84 LYS 9 \ END \ \ ""","model_5") cmd.show_as("cartoon" ,"model_5") cmd.spectrum(expression="count",selection="model_5_aln",byres=2)