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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/12 23:51:55 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 128.9040 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 28.125 \ ATOM 1 N ALA 1 -8.228 -0.084 8.434 1.00 16.30 N \ ATOM 2 CA ALA 1 -7.900 -0.347 9.852 1.00 16.30 C \ ATOM 3 CB ALA 1 -6.570 -1.110 9.963 1.00 16.30 C \ ATOM 4 C ALA 1 -7.760 0.944 10.580 1.00 16.30 C \ ATOM 5 O ALA 1 -8.731 1.675 10.768 1.00 16.30 O \ ATOM 6 N THR 2 -6.525 1.255 11.012 1.00 94.81 N \ ATOM 7 CA THR 2 -6.305 2.472 11.727 1.00 94.81 C \ ATOM 8 CB THR 2 -6.034 2.268 13.188 1.00 94.81 C \ ATOM 9 OG1 THR 2 -6.039 3.514 13.870 1.00 94.81 O \ ATOM 10 CG2 THR 2 -4.665 1.583 13.340 1.00 94.81 C \ ATOM 11 C THR 2 -5.104 3.134 11.140 1.00 94.81 C \ ATOM 12 O THR 2 -4.469 2.617 10.221 1.00 94.81 O \ ATOM 13 N GLU 3 -4.785 4.328 11.664 1.00 32.77 N \ ATOM 14 CA GLU 3 -3.650 5.080 11.228 1.00 32.77 C \ ATOM 15 CB GLU 3 -3.529 6.436 11.945 1.00 32.77 C \ ATOM 16 CG GLU 3 -2.379 7.306 11.441 1.00 32.77 C \ ATOM 17 CD GLU 3 -2.421 8.625 12.203 1.00 32.77 C \ ATOM 18 OE1 GLU 3 -3.531 9.212 12.307 1.00 32.77 O \ ATOM 19 OE2 GLU 3 -1.345 9.060 12.694 1.00 32.77 O \ ATOM 20 C GLU 3 -2.444 4.270 11.568 1.00 32.77 C \ ATOM 21 O GLU 3 -1.436 4.295 10.863 1.00 32.77 O \ ATOM 22 N ASP 4 -2.536 3.514 12.676 1.00 26.53 N \ ATOM 23 CA ASP 4 -1.430 2.728 13.137 1.00 26.53 C \ ATOM 24 CB ASP 4 -1.769 1.915 14.398 1.00 26.53 C \ ATOM 25 CG ASP 4 -2.006 2.881 15.553 1.00 26.53 C \ ATOM 26 OD1 ASP 4 -2.061 4.115 15.305 1.00 26.53 O \ ATOM 27 OD2 ASP 4 -2.138 2.389 16.706 1.00 26.53 O \ ATOM 28 C ASP 4 -1.062 1.752 12.064 1.00 26.53 C \ ATOM 29 O ASP 4 0.118 1.536 11.793 1.00 26.53 O \ ATOM 30 N GLU 5 -2.068 1.146 11.410 1.00 66.04 N \ ATOM 31 CA GLU 5 -1.796 0.190 10.375 1.00 66.04 C \ ATOM 32 CB GLU 5 -3.076 -0.393 9.752 1.00 66.04 C \ ATOM 33 CG GLU 5 -2.814 -1.228 8.494 1.00 66.04 C \ ATOM 34 CD GLU 5 -2.122 -2.517 8.904 1.00 66.04 C \ ATOM 35 OE1 GLU 5 -1.090 -2.433 9.622 1.00 66.04 O \ ATOM 36 OE2 GLU 5 -2.619 -3.604 8.505 1.00 66.04 O \ ATOM 37 C GLU 5 -1.067 0.883 9.273 1.00 66.04 C \ ATOM 38 O GLU 5 -0.104 0.357 8.717 1.00 66.04 O \ ATOM 39 N CYS 6 -1.506 2.110 8.955 1.00 50.74 N \ ATOM 40 CA CYS 6 -0.966 2.875 7.870 1.00 50.74 C \ ATOM 41 CB CYS 6 -1.729 4.207 7.706 1.00 50.74 C \ ATOM 42 SG CYS 6 -1.230 5.262 6.311 1.00 50.74 S \ ATOM 43 C CYS 6 0.479 3.150 8.144 1.00 50.74 C \ ATOM 44 O CYS 6 1.298 3.166 7.227 1.00 50.74 O \ ATOM 45 N ARG 7 0.835 3.385 9.421 1.00 80.19 N \ ATOM 46 CA ARG 7 2.204 3.667 9.735 1.00 80.19 C \ ATOM 47 CB ARG 7 2.413 4.015 11.219 1.00 80.19 C \ ATOM 48 CG ARG 7 3.760 4.685 11.502 1.00 80.19 C \ ATOM 49 CD ARG 7 3.879 5.257 12.918 1.00 80.19 C \ ATOM 50 NE ARG 7 4.689 4.308 13.731 1.00 80.19 N \ ATOM 51 CZ ARG 7 4.769 4.473 15.084 1.00 80.19 C \ ATOM 52 NH1 ARG 7 4.075 5.482 15.687 1.00 80.19 N \ ATOM 53 NH2 ARG 7 5.543 3.636 15.835 1.00 80.19 N \ ATOM 54 C ARG 7 3.019 2.452 9.411 1.00 80.19 C \ ATOM 55 O ARG 7 4.105 2.556 8.843 1.00 80.19 O \ ATOM 56 N GLU 8 2.492 1.259 9.746 1.00 67.03 N \ ATOM 57 CA GLU 8 3.181 0.022 9.515 1.00 67.03 C \ ATOM 58 CB GLU 8 2.395 -1.198 10.019 1.00 67.03 C \ ATOM 59 CG GLU 8 3.127 -2.520 9.787 1.00 67.03 C \ ATOM 60 CD GLU 8 2.254 -3.642 10.323 1.00 67.03 C \ ATOM 61 OE1 GLU 8 1.105 -3.346 10.747 1.00 67.03 O \ ATOM 62 OE2 GLU 8 2.729 -4.809 10.318 1.00 67.03 O \ ATOM 63 C GLU 8 3.357 -0.152 8.042 1.00 67.03 C \ ATOM 64 O GLU 8 4.384 -0.654 7.592 1.00 67.03 O \ ATOM 65 N GLN 9 2.346 0.251 7.251 1.00 36.28 N \ ATOM 66 CA GLN 9 2.440 0.118 5.828 1.00 36.28 C \ ATOM 67 CB GLN 9 1.189 0.592 5.069 1.00 36.28 C \ ATOM 68 CG GLN 9 -0.025 -0.328 5.206 1.00 36.28 C \ ATOM 69 CD GLN 9 -1.134 0.235 4.327 1.00 36.28 C \ ATOM 70 OE1 GLN 9 -0.964 1.269 3.683 1.00 36.28 O \ ATOM 71 NE2 GLN 9 -2.300 -0.465 4.293 1.00 36.28 N \ ATOM 72 C GLN 9 3.572 0.965 5.355 1.00 36.28 C \ ATOM 73 O GLN 9 4.296 0.583 4.440 1.00 36.28 O \ ATOM 74 N CYS 10 3.734 2.159 5.949 1.00 35.51 N \ ATOM 75 CA CYS 10 4.793 3.045 5.560 1.00 35.51 C \ ATOM 76 CB CYS 10 4.710 4.412 6.263 1.00 35.51 C \ ATOM 77 SG CYS 10 6.032 5.570 5.791 1.00 35.51 S \ ATOM 78 C CYS 10 6.095 2.410 5.921 1.00 35.51 C \ ATOM 79 O CYS 10 7.078 2.528 5.191 1.00 35.51 O \ ATOM 80 N LEU 11 6.119 1.699 7.062 1.00 92.19 N \ ATOM 81 CA LEU 11 7.313 1.078 7.563 1.00 92.19 C \ ATOM 82 CB LEU 11 7.063 0.339 8.903 1.00 92.19 C \ ATOM 83 CG LEU 11 8.278 -0.306 9.622 1.00 92.19 C \ ATOM 84 CD1 LEU 11 7.834 -0.924 10.959 1.00 92.19 C \ ATOM 85 CD2 LEU 11 9.032 -1.348 8.774 1.00 92.19 C \ ATOM 86 C LEU 11 7.771 0.085 6.548 1.00 92.19 C \ ATOM 87 O LEU 11 8.972 -0.079 6.341 1.00 92.19 O \ ATOM 88 N LYS 12 6.831 -0.613 5.889 1.00 78.74 N \ ATOM 89 CA LYS 12 7.246 -1.642 4.986 1.00 78.74 C \ ATOM 90 CB LYS 12 6.077 -2.412 4.339 1.00 78.74 C \ ATOM 91 CG LYS 12 5.336 -1.647 3.241 1.00 78.74 C \ ATOM 92 CD LYS 12 4.424 -2.539 2.392 1.00 78.74 C \ ATOM 93 CE LYS 12 3.686 -1.794 1.278 1.00 78.74 C \ ATOM 94 NZ LYS 12 2.862 -2.743 0.496 1.00 78.74 N \ ATOM 95 C LYS 12 8.074 -1.058 3.884 1.00 78.74 C \ ATOM 96 O LYS 12 9.137 -1.585 3.564 1.00 78.74 O \ ATOM 97 N ASN 13 7.630 0.063 3.283 1.00 38.95 N \ ATOM 98 CA ASN 13 8.373 0.615 2.187 1.00 38.95 C \ ATOM 99 CB ASN 13 7.509 1.473 1.246 1.00 38.95 C \ ATOM 100 CG ASN 13 6.577 0.537 0.490 1.00 38.95 C \ ATOM 101 OD1 ASN 13 7.022 -0.291 -0.305 1.00 38.95 O \ ATOM 102 ND2 ASN 13 5.247 0.665 0.746 1.00 38.95 N \ ATOM 103 C ASN 13 9.465 1.486 2.719 1.00 38.95 C \ ATOM 104 O ASN 13 9.226 2.403 3.502 1.00 38.95 O \ ATOM 105 N CYS 14 10.711 1.204 2.297 1.00 31.21 N \ ATOM 106 CA CYS 14 11.836 1.999 2.693 1.00 31.21 C \ ATOM 107 CB CYS 14 13.178 1.423 2.208 1.00 31.21 C \ ATOM 108 SG CYS 14 14.598 2.444 2.707 1.00 31.21 S \ ATOM 109 C CYS 14 11.674 3.356 2.082 1.00 31.21 C \ ATOM 110 O CYS 14 12.038 4.369 2.678 1.00 31.21 O \ ATOM 111 N SER 15 11.121 3.384 0.856 1.00 41.59 N \ ATOM 112 CA SER 15 10.945 4.581 0.089 1.00 41.59 C \ ATOM 113 CB SER 15 10.496 4.299 -1.357 1.00 41.59 C \ ATOM 114 OG SER 15 11.509 3.590 -2.055 1.00 41.59 O \ ATOM 115 C SER 15 9.906 5.459 0.717 1.00 41.59 C \ ATOM 116 O SER 15 9.877 6.661 0.455 1.00 41.59 O \ ATOM 117 N CYS 16 9.025 4.894 1.564 1.00 59.15 N \ ATOM 118 CA CYS 16 7.959 5.675 2.130 1.00 59.15 C \ ATOM 119 CB CYS 16 6.994 4.853 3.009 1.00 59.15 C \ ATOM 120 SG CYS 16 5.733 5.888 3.808 1.00 59.15 S \ ATOM 121 C CYS 16 8.513 6.759 2.997 1.00 59.15 C \ ATOM 122 O CYS 16 9.035 6.501 4.081 1.00 59.15 O \ ATOM 123 N ILE 17 8.452 8.009 2.495 1.00 51.10 N \ ATOM 124 CA ILE 17 8.857 9.166 3.239 1.00 51.10 C \ ATOM 125 CB ILE 17 8.992 10.394 2.385 1.00 51.10 C \ ATOM 126 CG2 ILE 17 9.229 11.599 3.311 1.00 51.10 C \ ATOM 127 CG1 ILE 17 10.101 10.199 1.336 1.00 51.10 C \ ATOM 128 CD1 ILE 17 10.133 11.288 0.263 1.00 51.10 C \ ATOM 129 C ILE 17 7.840 9.456 4.300 1.00 51.10 C \ ATOM 130 O ILE 17 8.190 9.733 5.447 1.00 51.10 O \ ATOM 131 N ALA 18 6.541 9.407 3.926 1.00 37.79 N \ ATOM 132 CA ALA 18 5.476 9.701 4.843 1.00 37.79 C \ ATOM 133 CB ALA 18 5.187 11.204 4.976 1.00 37.79 C \ ATOM 134 C ALA 18 4.245 9.062 4.290 1.00 37.79 C \ ATOM 135 O ALA 18 4.234 8.607 3.147 1.00 37.79 O \ ATOM 136 N TYR 19 3.173 8.978 5.102 1.00 58.26 N \ ATOM 137 CA TYR 19 1.976 8.363 4.611 1.00 58.26 C \ ATOM 138 CB TYR 19 1.719 6.970 5.217 1.00 58.26 C \ ATOM 139 CG TYR 19 1.671 7.114 6.701 1.00 58.26 C \ ATOM 140 CD1 TYR 19 0.522 7.525 7.339 1.00 58.26 C \ ATOM 141 CD2 TYR 19 2.783 6.832 7.462 1.00 58.26 C \ ATOM 142 CE1 TYR 19 0.486 7.651 8.709 1.00 58.26 C \ ATOM 143 CE2 TYR 19 2.754 6.957 8.831 1.00 58.26 C \ ATOM 144 CZ TYR 19 1.603 7.370 9.458 1.00 58.26 C \ ATOM 145 OH TYR 19 1.567 7.501 10.863 1.00 58.26 O \ ATOM 146 C TYR 19 0.803 9.225 4.942 1.00 58.26 C \ ATOM 147 O TYR 19 0.781 9.911 5.962 1.00 58.26 O \ ATOM 148 N ALA 20 -0.206 9.232 4.051 1.00 45.68 N \ ATOM 149 CA ALA 20 -1.404 9.958 4.348 1.00 45.68 C \ ATOM 150 CB ALA 20 -1.885 10.860 3.201 1.00 45.68 C \ ATOM 151 C ALA 20 -2.447 8.917 4.577 1.00 45.68 C \ ATOM 152 O ALA 20 -2.676 8.059 3.726 1.00 45.68 O \ ATOM 153 N PHE 21 -3.113 8.973 5.745 1.00 80.54 N \ ATOM 154 CA PHE 21 -4.073 7.956 6.058 1.00 80.54 C \ ATOM 155 CB PHE 21 -4.077 7.606 7.559 1.00 80.54 C \ ATOM 156 CG PHE 21 -5.095 6.549 7.816 1.00 80.54 C \ ATOM 157 CD1 PHE 21 -4.905 5.262 7.366 1.00 80.54 C \ ATOM 158 CD2 PHE 21 -6.229 6.839 8.539 1.00 80.54 C \ ATOM 159 CE1 PHE 21 -5.842 4.287 7.614 1.00 80.54 C \ ATOM 160 CE2 PHE 21 -7.169 5.869 8.791 1.00 80.54 C \ ATOM 161 CZ PHE 21 -6.980 4.591 8.323 1.00 80.54 C \ ATOM 162 C PHE 21 -5.425 8.441 5.654 1.00 80.54 C \ ATOM 163 O PHE 21 -5.994 9.344 6.262 1.00 80.54 O \ ATOM 164 N ASP 22 -5.974 7.824 4.592 1.00127.31 N \ ATOM 165 CA ASP 22 -7.250 8.207 4.072 1.00127.31 C \ ATOM 166 CB ASP 22 -7.631 7.381 2.829 1.00127.31 C \ ATOM 167 CG ASP 22 -8.886 7.970 2.201 1.00127.31 C \ ATOM 168 OD1 ASP 22 -9.514 8.858 2.835 1.00127.31 O \ ATOM 169 OD2 ASP 22 -9.233 7.532 1.071 1.00127.31 O \ ATOM 170 C ASP 22 -8.284 7.962 5.118 1.00127.31 C \ ATOM 171 O ASP 22 -9.077 8.843 5.435 1.00127.31 O \ ATOM 172 N GLY 23 -8.306 6.757 5.709 1.00210.06 N \ ATOM 173 CA GLY 23 -9.325 6.490 6.682 1.00210.06 C \ ATOM 174 C GLY 23 -10.553 6.154 5.907 1.00210.06 C \ ATOM 175 O GLY 23 -11.606 5.851 6.465 1.00210.06 O \ ATOM 176 N GLY 24 -10.421 6.205 4.572 1.00123.52 N \ ATOM 177 CA GLY 24 -11.484 5.901 3.671 1.00123.52 C \ ATOM 178 C GLY 24 -11.177 4.538 3.175 1.00123.52 C \ ATOM 179 O GLY 24 -11.186 3.574 3.939 1.00123.52 O \ ATOM 180 N ILE 25 -10.904 4.420 1.865 1.00241.64 N \ ATOM 181 CA ILE 25 -10.595 3.111 1.389 1.00241.64 C \ ATOM 182 CB ILE 25 -11.146 2.833 0.012 1.00241.64 C \ ATOM 183 CG2 ILE 25 -10.715 3.954 -0.953 1.00241.64 C \ ATOM 184 CG1 ILE 25 -10.783 1.408 -0.437 1.00241.64 C \ ATOM 185 CD1 ILE 25 -11.531 0.952 -1.692 1.00241.64 C \ ATOM 186 C ILE 25 -9.105 2.945 1.370 1.00241.64 C \ ATOM 187 O ILE 25 -8.435 3.235 0.380 1.00241.64 O \ ATOM 188 N GLY 26 -8.547 2.450 2.494 1.00116.13 N \ ATOM 189 CA GLY 26 -7.150 2.134 2.541 1.00116.13 C \ ATOM 190 C GLY 26 -6.337 3.321 2.964 1.00116.13 C \ ATOM 191 O GLY 26 -6.841 4.436 3.082 1.00116.13 O \ ATOM 192 N CYS 27 -5.028 3.061 3.191 1.00 70.42 N \ ATOM 193 CA CYS 27 -3.997 3.983 3.588 1.00 70.42 C \ ATOM 194 CB CYS 27 -3.056 3.388 4.658 1.00 70.42 C \ ATOM 195 SG CYS 27 -1.375 4.091 4.656 1.00 70.42 S \ ATOM 196 C CYS 27 -3.165 4.276 2.385 1.00 70.42 C \ ATOM 197 O CYS 27 -3.093 3.472 1.457 1.00 70.42 O \ ATOM 198 N MET 28 -2.523 5.461 2.361 1.00107.48 N \ ATOM 199 CA MET 28 -1.720 5.782 1.222 1.00107.48 C \ ATOM 200 CB MET 28 -2.189 7.061 0.507 1.00107.48 C \ ATOM 201 CG MET 28 -1.447 7.351 -0.797 1.00107.48 C \ ATOM 202 SD MET 28 -2.033 8.840 -1.661 1.00107.48 S \ ATOM 203 CE MET 28 -1.005 8.575 -3.133 1.00107.48 C \ ATOM 204 C MET 28 -0.314 6.002 1.677 1.00107.48 C \ ATOM 205 O MET 28 -0.001 7.016 2.303 1.00107.48 O \ ATOM 206 N VAL 29 0.578 5.041 1.362 1.00 44.62 N \ ATOM 207 CA VAL 29 1.962 5.195 1.691 1.00 44.62 C \ ATOM 208 CB VAL 29 2.727 3.903 1.659 1.00 44.62 C \ ATOM 209 CG1 VAL 29 4.224 4.216 1.785 1.00 44.62 C \ ATOM 210 CG2 VAL 29 2.191 2.992 2.775 1.00 44.62 C \ ATOM 211 C VAL 29 2.527 6.066 0.624 1.00 44.62 C \ ATOM 212 O VAL 29 2.329 5.804 -0.561 1.00 44.62 O \ ATOM 213 N TRP 30 3.262 7.126 1.012 1.00 86.11 N \ ATOM 214 CA TRP 30 3.772 8.017 0.011 1.00 86.11 C \ ATOM 215 CB TRP 30 3.661 9.507 0.385 1.00 86.11 C \ ATOM 216 CG TRP 30 2.263 10.071 0.313 1.00 86.11 C \ ATOM 217 CD2 TRP 30 1.862 11.309 0.916 1.00 86.11 C \ ATOM 218 CD1 TRP 30 1.158 9.565 -0.308 1.00 86.11 C \ ATOM 219 NE1 TRP 30 0.094 10.418 -0.135 1.00 86.11 N \ ATOM 220 CE2 TRP 30 0.513 11.495 0.618 1.00 86.11 C \ ATOM 221 CE3 TRP 30 2.561 12.219 1.658 1.00 86.11 C \ ATOM 222 CZ2 TRP 30 -0.162 12.599 1.058 1.00 86.11 C \ ATOM 223 CZ3 TRP 30 1.876 13.329 2.100 1.00 86.11 C \ ATOM 224 CH2 TRP 30 0.541 13.517 1.806 1.00 86.11 C \ ATOM 225 C TRP 30 5.217 7.735 -0.197 1.00 86.11 C \ ATOM 226 O TRP 30 6.029 7.875 0.716 1.00 86.11 O \ ATOM 227 N ARG 31 5.550 7.302 -1.428 1.00192.81 N \ ATOM 228 CA ARG 31 6.893 7.035 -1.850 1.00192.81 C \ ATOM 229 CB ARG 31 6.928 6.351 -3.227 1.00192.81 C \ ATOM 230 CG ARG 31 6.337 4.940 -3.168 1.00192.81 C \ ATOM 231 CD ARG 31 6.072 4.288 -4.525 1.00192.81 C \ ATOM 232 NE ARG 31 5.528 2.927 -4.248 1.00192.81 N \ ATOM 233 CZ ARG 31 4.491 2.433 -4.984 1.00192.81 C \ ATOM 234 NH1 ARG 31 3.932 3.189 -5.972 1.00192.81 N \ ATOM 235 NH2 ARG 31 4.016 1.178 -4.729 1.00192.81 N \ ATOM 236 C ARG 31 7.606 8.342 -1.928 1.00192.81 C \ ATOM 237 O ARG 31 8.778 8.464 -1.578 1.00192.81 O \ ATOM 238 N SER 32 6.906 9.379 -2.407 1.00 74.42 N \ ATOM 239 CA SER 32 7.542 10.657 -2.465 1.00 74.42 C \ ATOM 240 CB SER 32 6.984 11.569 -3.570 1.00 74.42 C \ ATOM 241 OG SER 32 7.223 10.988 -4.844 1.00 74.42 O \ ATOM 242 C SER 32 7.249 11.314 -1.122 1.00 74.42 C \ ATOM 243 O SER 32 6.776 12.480 -1.123 1.00 74.42 O \ ATOM 244 OXT SER 32 7.486 10.653 -0.075 1.00 74.42 O \ TER 245 SER 32 \ END \ \ ""","model_4") cmd.show_as("cartoon" ,"model_4") cmd.spectrum(expression="count",selection="model_4_aln",byres=2)