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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/09 12:47:15 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 128.5916 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 12.903 \ ATOM 1 N GLY 1 8.620 -5.454 0.714 1.00 26.06 N \ ATOM 2 CA GLY 1 7.347 -6.171 0.459 1.00 26.06 C \ ATOM 3 C GLY 1 7.141 -7.260 1.462 1.00 26.06 C \ ATOM 4 O GLY 1 7.814 -7.309 2.490 1.00 26.06 O \ ATOM 5 N GLU 2 6.193 -8.176 1.183 1.00113.16 N \ ATOM 6 CA GLU 2 5.957 -9.233 2.120 1.00113.16 C \ ATOM 7 CB GLU 2 4.753 -10.132 1.758 1.00113.16 C \ ATOM 8 CG GLU 2 4.851 -10.846 0.406 1.00113.16 C \ ATOM 9 CD GLU 2 5.371 -12.266 0.621 1.00113.16 C \ ATOM 10 OE1 GLU 2 5.464 -12.702 1.800 1.00113.16 O \ ATOM 11 OE2 GLU 2 5.674 -12.938 -0.402 1.00113.16 O \ ATOM 12 C GLU 2 7.209 -10.045 2.202 1.00113.16 C \ ATOM 13 O GLU 2 7.860 -10.324 1.197 1.00113.16 O \ ATOM 14 N ASN 3 7.578 -10.443 3.435 1.00 78.65 N \ ATOM 15 CA ASN 3 8.802 -11.154 3.660 1.00 78.65 C \ ATOM 16 CB ASN 3 8.825 -12.565 3.037 1.00 78.65 C \ ATOM 17 CG ASN 3 9.969 -13.387 3.628 1.00 78.65 C \ ATOM 18 OD1 ASN 3 11.134 -13.002 3.583 1.00 78.65 O \ ATOM 19 ND2 ASN 3 9.620 -14.572 4.197 1.00 78.65 N \ ATOM 20 C ASN 3 9.895 -10.328 3.065 1.00 78.65 C \ ATOM 21 O ASN 3 10.748 -10.827 2.338 1.00 78.65 O \ ATOM 22 N GLY 4 9.875 -9.013 3.367 1.00 31.44 N \ ATOM 23 CA GLY 4 10.879 -8.114 2.880 1.00 31.44 C \ ATOM 24 C GLY 4 11.649 -7.663 4.072 1.00 31.44 C \ ATOM 25 O GLY 4 11.194 -7.812 5.204 1.00 31.44 O \ ATOM 26 N LYS 5 12.854 -7.106 3.847 1.00 83.49 N \ ATOM 27 CA LYS 5 13.651 -6.694 4.961 1.00 83.49 C \ ATOM 28 CB LYS 5 15.026 -6.150 4.545 1.00 83.49 C \ ATOM 29 CG LYS 5 15.957 -7.213 3.964 1.00 83.49 C \ ATOM 30 CD LYS 5 17.230 -6.619 3.361 1.00 83.49 C \ ATOM 31 CE LYS 5 17.014 -5.976 1.993 1.00 83.49 C \ ATOM 32 NZ LYS 5 16.782 -7.030 0.982 1.00 83.49 N \ ATOM 33 C LYS 5 12.942 -5.601 5.690 1.00 83.49 C \ ATOM 34 O LYS 5 12.779 -5.661 6.908 1.00 83.49 O \ ATOM 35 N VAL 6 12.470 -4.573 4.964 1.00 40.28 N \ ATOM 36 CA VAL 6 11.823 -3.498 5.651 1.00 40.28 C \ ATOM 37 CB VAL 6 12.631 -2.233 5.628 1.00 40.28 C \ ATOM 38 CG1 VAL 6 11.791 -1.101 6.239 1.00 40.28 C \ ATOM 39 CG2 VAL 6 13.975 -2.487 6.337 1.00 40.28 C \ ATOM 40 C VAL 6 10.548 -3.214 4.931 1.00 40.28 C \ ATOM 41 O VAL 6 10.494 -3.286 3.705 1.00 40.28 O \ ATOM 42 N LYS 7 9.472 -2.901 5.683 1.00106.65 N \ ATOM 43 CA LYS 7 8.245 -2.586 5.018 1.00106.65 C \ ATOM 44 CB LYS 7 7.177 -3.683 5.125 1.00106.65 C \ ATOM 45 CG LYS 7 6.041 -3.460 4.133 1.00106.65 C \ ATOM 46 CD LYS 7 6.543 -3.496 2.691 1.00106.65 C \ ATOM 47 CE LYS 7 5.479 -3.147 1.652 1.00106.65 C \ ATOM 48 NZ LYS 7 6.116 -2.933 0.334 1.00106.65 N \ ATOM 49 C LYS 7 7.672 -1.353 5.634 1.00106.65 C \ ATOM 50 O LYS 7 7.247 -1.355 6.789 1.00106.65 O \ ATOM 51 N LYS 8 7.642 -0.264 4.843 1.00 88.59 N \ ATOM 52 CA LYS 8 7.100 0.990 5.266 1.00 88.59 C \ ATOM 53 CB LYS 8 7.609 2.131 4.380 1.00 88.59 C \ ATOM 54 CG LYS 8 7.441 1.812 2.892 1.00 88.59 C \ ATOM 55 CD LYS 8 7.796 2.958 1.943 1.00 88.59 C \ ATOM 56 CE LYS 8 7.920 2.507 0.483 1.00 88.59 C \ ATOM 57 NZ LYS 8 8.265 3.649 -0.392 1.00 88.59 N \ ATOM 58 C LYS 8 5.623 0.889 5.091 1.00 88.59 C \ ATOM 59 O LYS 8 5.135 0.610 3.998 1.00 88.59 O \ ATOM 60 N ALA 9 4.858 1.127 6.173 1.00 29.63 N \ ATOM 61 CA ALA 9 3.434 1.021 6.050 1.00 29.63 C \ ATOM 62 CB ALA 9 2.820 -0.077 6.935 1.00 29.63 C \ ATOM 63 C ALA 9 2.847 2.322 6.485 1.00 29.63 C \ ATOM 64 O ALA 9 3.352 2.976 7.396 1.00 29.63 O \ ATOM 65 N SER 10 1.750 2.747 5.836 1.00 72.72 N \ ATOM 66 CA SER 10 1.184 4.004 6.222 1.00 72.72 C \ ATOM 67 CB SER 10 1.369 5.102 5.192 1.00 72.72 C \ ATOM 68 OG SER 10 0.510 6.184 5.522 1.00 72.72 O \ ATOM 69 C SER 10 -0.289 3.881 6.367 1.00 72.72 C \ ATOM 70 O SER 10 -0.937 3.105 5.668 1.00 72.72 O \ ATOM 71 N TRP 11 -0.861 4.668 7.297 1.00110.32 N \ ATOM 72 CA TRP 11 -2.277 4.598 7.451 1.00110.32 C \ ATOM 73 CB TRP 11 -2.709 3.688 8.618 1.00110.32 C \ ATOM 74 CG TRP 11 -4.183 3.760 8.925 1.00110.32 C \ ATOM 75 CD2 TRP 11 -5.213 3.184 8.111 1.00110.32 C \ ATOM 76 CD1 TRP 11 -4.814 4.396 9.955 1.00110.32 C \ ATOM 77 NE1 TRP 11 -6.174 4.242 9.835 1.00110.32 N \ ATOM 78 CE2 TRP 11 -6.436 3.499 8.699 1.00110.32 C \ ATOM 79 CE3 TRP 11 -5.150 2.453 6.956 1.00110.32 C \ ATOM 80 CZ2 TRP 11 -7.616 3.087 8.145 1.00110.32 C \ ATOM 81 CZ3 TRP 11 -6.340 2.036 6.402 1.00110.32 C \ ATOM 82 CH2 TRP 11 -7.553 2.346 6.983 1.00110.32 C \ ATOM 83 C TRP 11 -2.836 5.965 7.676 1.00110.32 C \ ATOM 84 O TRP 11 -2.301 6.770 8.436 1.00110.32 O \ ATOM 85 N ASP 12 -3.915 6.274 6.940 1.00130.34 N \ ATOM 86 CA ASP 12 -4.699 7.453 7.155 1.00130.34 C \ ATOM 87 CB ASP 12 -3.991 8.817 7.043 1.00130.34 C \ ATOM 88 CG ASP 12 -3.616 9.038 5.600 1.00130.34 C \ ATOM 89 OD1 ASP 12 -3.119 8.053 5.001 1.00130.34 O \ ATOM 90 OD2 ASP 12 -3.822 10.164 5.072 1.00130.34 O \ ATOM 91 C ASP 12 -5.811 7.387 6.162 1.00130.34 C \ ATOM 92 O ASP 12 -5.660 6.829 5.076 1.00130.34 O \ ATOM 93 N SER 13 -6.975 7.948 6.517 1.00 29.13 N \ ATOM 94 CA SER 13 -8.113 7.855 5.654 1.00 29.13 C \ ATOM 95 CB SER 13 -9.360 8.532 6.243 1.00 29.13 C \ ATOM 96 OG SER 13 -9.758 7.850 7.424 1.00 29.13 O \ ATOM 97 C SER 13 -7.778 8.525 4.364 1.00 29.13 C \ ATOM 98 O SER 13 -8.258 8.120 3.307 1.00 29.13 O \ ATOM 99 N SER 14 -6.937 9.572 4.417 1.00 72.91 N \ ATOM 100 CA SER 14 -6.580 10.240 3.204 1.00 72.91 C \ ATOM 101 CB SER 14 -5.880 11.585 3.449 1.00 72.91 C \ ATOM 102 OG SER 14 -5.545 12.205 2.219 1.00 72.91 O \ ATOM 103 C SER 14 -5.656 9.354 2.428 1.00 72.91 C \ ATOM 104 O SER 14 -4.683 8.820 2.959 1.00 72.91 O \ ATOM 105 N LYS 15 -5.971 9.171 1.133 1.00100.30 N \ ATOM 106 CA LYS 15 -5.195 8.351 0.249 1.00100.30 C \ ATOM 107 CB LYS 15 -5.910 8.187 -1.107 1.00100.30 C \ ATOM 108 CG LYS 15 -5.355 7.111 -2.046 1.00100.30 C \ ATOM 109 CD LYS 15 -6.322 6.792 -3.194 1.00100.30 C \ ATOM 110 CE LYS 15 -5.817 5.737 -4.180 1.00100.30 C \ ATOM 111 NZ LYS 15 -4.653 6.262 -4.925 1.00100.30 N \ ATOM 112 C LYS 15 -3.863 9.000 0.014 1.00100.30 C \ ATOM 113 O LYS 15 -2.817 8.363 0.117 1.00100.30 O \ ATOM 114 N SER 16 -3.879 10.317 -0.271 1.00 70.27 N \ ATOM 115 CA SER 16 -2.689 11.032 -0.638 1.00 70.27 C \ ATOM 116 CB SER 16 -2.979 12.506 -0.973 1.00 70.27 C \ ATOM 117 OG SER 16 -1.775 13.180 -1.306 1.00 70.27 O \ ATOM 118 C SER 16 -1.698 11.019 0.480 1.00 70.27 C \ ATOM 119 O SER 16 -0.516 10.750 0.273 1.00 70.27 O \ ATOM 120 N LYS 17 -2.164 11.316 1.701 1.00108.01 N \ ATOM 121 CA LYS 17 -1.287 11.398 2.828 1.00108.01 C \ ATOM 122 CB LYS 17 -1.963 12.014 4.056 1.00108.01 C \ ATOM 123 CG LYS 17 -0.974 12.370 5.158 1.00108.01 C \ ATOM 124 CD LYS 17 -1.583 13.247 6.247 1.00108.01 C \ ATOM 125 CE LYS 17 -0.939 12.991 7.605 1.00108.01 C \ ATOM 126 NZ LYS 17 -1.180 11.578 7.971 1.00108.01 N \ ATOM 127 C LYS 17 -0.747 10.041 3.157 1.00108.01 C \ ATOM 128 O LYS 17 0.367 9.916 3.659 1.00108.01 O \ ATOM 129 N ALA 18 -1.530 8.984 2.869 1.00 35.08 N \ ATOM 130 CA ALA 18 -1.110 7.658 3.203 1.00 35.08 C \ ATOM 131 CB ALA 18 -2.093 6.593 2.699 1.00 35.08 C \ ATOM 132 C ALA 18 0.189 7.422 2.524 1.00 35.08 C \ ATOM 133 O ALA 18 1.103 6.827 3.099 1.00 35.08 O \ ATOM 134 N LYS 19 0.347 7.889 1.285 1.00127.35 N \ ATOM 135 CA LYS 19 1.601 7.613 0.653 1.00127.35 C \ ATOM 136 CB LYS 19 1.698 8.131 -0.787 1.00127.35 C \ ATOM 137 CG LYS 19 3.053 7.806 -1.421 1.00127.35 C \ ATOM 138 CD LYS 19 3.115 8.088 -2.922 1.00127.35 C \ ATOM 139 CE LYS 19 3.042 9.577 -3.265 1.00127.35 C \ ATOM 140 NZ LYS 19 4.099 10.312 -2.535 1.00127.35 N \ ATOM 141 C LYS 19 2.719 8.265 1.413 1.00127.35 C \ ATOM 142 O LYS 19 3.770 7.667 1.633 1.00127.35 O \ ATOM 143 N LYS 20 2.525 9.519 1.849 1.00110.39 N \ ATOM 144 CA LYS 20 3.629 10.182 2.475 1.00110.39 C \ ATOM 145 CB LYS 20 3.374 11.666 2.771 1.00110.39 C \ ATOM 146 CG LYS 20 2.314 11.937 3.833 1.00110.39 C \ ATOM 147 CD LYS 20 2.387 13.371 4.362 1.00110.39 C \ ATOM 148 CE LYS 20 2.340 14.428 3.255 1.00110.39 C \ ATOM 149 NZ LYS 20 2.552 15.776 3.828 1.00110.39 N \ ATOM 150 C LYS 20 4.004 9.508 3.757 1.00110.39 C \ ATOM 151 O LYS 20 5.190 9.346 4.048 1.00110.39 O \ ATOM 152 N LYS 21 3.010 9.087 4.560 1.00 99.60 N \ ATOM 153 CA LYS 21 3.334 8.510 5.832 1.00 99.60 C \ ATOM 154 CB LYS 21 2.111 8.137 6.686 1.00 99.60 C \ ATOM 155 CG LYS 21 2.511 7.423 7.984 1.00 99.60 C \ ATOM 156 CD LYS 21 1.365 7.167 8.967 1.00 99.60 C \ ATOM 157 CE LYS 21 1.123 8.317 9.948 1.00 99.60 C \ ATOM 158 NZ LYS 21 0.076 7.943 10.926 1.00 99.60 N \ ATOM 159 C LYS 21 4.121 7.253 5.654 1.00 99.60 C \ ATOM 160 O LYS 21 5.053 6.990 6.412 1.00 99.60 O \ ATOM 161 N LYS 22 3.776 6.449 4.635 1.00 81.20 N \ ATOM 162 CA LYS 22 4.379 5.157 4.505 1.00 81.20 C \ ATOM 163 CB LYS 22 3.841 4.357 3.298 1.00 81.20 C \ ATOM 164 CG LYS 22 4.134 4.970 1.926 1.00 81.20 C \ ATOM 165 CD LYS 22 3.849 4.033 0.745 1.00 81.20 C \ ATOM 166 CE LYS 22 3.984 4.721 -0.621 1.00 81.20 C \ ATOM 167 NZ LYS 22 3.746 3.757 -1.725 1.00 81.20 N \ ATOM 168 C LYS 22 5.859 5.306 4.366 1.00 81.20 C \ ATOM 169 O LYS 22 6.616 4.595 5.024 1.00 81.20 O \ ATOM 170 N LYS 23 6.312 6.264 3.536 1.00 82.71 N \ ATOM 171 CA LYS 23 7.720 6.414 3.309 1.00 82.71 C \ ATOM 172 CB LYS 23 8.063 7.541 2.316 1.00 82.71 C \ ATOM 173 CG LYS 23 7.680 8.939 2.809 1.00 82.71 C \ ATOM 174 CD LYS 23 8.385 10.075 2.060 1.00 82.71 C \ ATOM 175 CE LYS 23 8.010 11.470 2.571 1.00 82.71 C \ ATOM 176 NZ LYS 23 8.936 12.489 2.024 1.00 82.71 N \ ATOM 177 C LYS 23 8.388 6.761 4.599 1.00 82.71 C \ ATOM 178 O LYS 23 9.415 6.182 4.954 1.00 82.71 O \ ATOM 179 N LYS 24 7.787 7.686 5.361 1.00124.77 N \ ATOM 180 CA LYS 24 8.371 8.160 6.580 1.00124.77 C \ ATOM 181 CB LYS 24 7.480 9.199 7.278 1.00124.77 C \ ATOM 182 CG LYS 24 8.146 9.900 8.460 1.00124.77 C \ ATOM 183 CD LYS 24 9.274 10.845 8.050 1.00124.77 C \ ATOM 184 CE LYS 24 8.810 12.032 7.207 1.00124.77 C \ ATOM 185 NZ LYS 24 8.663 11.619 5.796 1.00124.77 N \ ATOM 186 C LYS 24 8.522 7.007 7.512 1.00124.77 C \ ATOM 187 O LYS 24 9.483 6.935 8.277 1.00124.77 O \ ATOM 188 N VAL 25 7.559 6.072 7.461 1.00 35.64 N \ ATOM 189 CA VAL 25 7.536 4.950 8.349 1.00 35.64 C \ ATOM 190 CB VAL 25 6.354 4.060 8.126 1.00 35.64 C \ ATOM 191 CG1 VAL 25 6.468 2.856 9.075 1.00 35.64 C \ ATOM 192 CG2 VAL 25 5.081 4.897 8.327 1.00 35.64 C \ ATOM 193 C VAL 25 8.760 4.123 8.148 1.00 35.64 C \ ATOM 194 O VAL 25 9.360 3.660 9.117 1.00 35.64 O \ ATOM 195 N GLU 26 9.180 3.934 6.883 1.00 42.93 N \ ATOM 196 CA GLU 26 10.320 3.098 6.630 1.00 42.93 C \ ATOM 197 CB GLU 26 10.701 3.002 5.141 1.00 42.93 C \ ATOM 198 CG GLU 26 11.921 2.110 4.886 1.00 42.93 C \ ATOM 199 CD GLU 26 12.125 1.977 3.380 1.00 42.93 C \ ATOM 200 OE1 GLU 26 12.228 3.026 2.692 1.00 42.93 O \ ATOM 201 OE2 GLU 26 12.179 0.813 2.897 1.00 42.93 O \ ATOM 202 C GLU 26 11.472 3.693 7.364 1.00 42.93 C \ ATOM 203 O GLU 26 12.331 2.978 7.877 1.00 42.93 O \ ATOM 204 N ASP 27 11.510 5.032 7.448 1.00 78.31 N \ ATOM 205 CA ASP 27 12.592 5.661 8.144 1.00 78.31 C \ ATOM 206 CB ASP 27 12.474 7.196 8.169 1.00 78.31 C \ ATOM 207 CG ASP 27 13.697 7.783 8.864 1.00 78.31 C \ ATOM 208 OD1 ASP 27 14.633 7.001 9.179 1.00 78.31 O \ ATOM 209 OD2 ASP 27 13.710 9.023 9.090 1.00 78.31 O \ ATOM 210 C ASP 27 12.592 5.200 9.571 1.00 78.31 C \ ATOM 211 O ASP 27 13.642 4.859 10.111 1.00 78.31 O \ ATOM 212 N GLU 28 11.412 5.134 10.216 1.00 36.71 N \ ATOM 213 CA GLU 28 11.383 4.789 11.611 1.00 36.71 C \ ATOM 214 CB GLU 28 9.962 4.737 12.194 1.00 36.71 C \ ATOM 215 CG GLU 28 9.249 6.088 12.226 1.00 36.71 C \ ATOM 216 CD GLU 28 7.896 5.877 12.894 1.00 36.71 C \ ATOM 217 OE1 GLU 28 7.854 5.159 13.928 1.00 36.71 O \ ATOM 218 OE2 GLU 28 6.887 6.429 12.376 1.00 36.71 O \ ATOM 219 C GLU 28 11.962 3.422 11.794 1.00 36.71 C \ ATOM 220 O GLU 28 12.739 3.187 12.718 1.00 36.71 O \ ATOM 221 N VAL 29 11.613 2.482 10.900 1.00 57.26 N \ ATOM 222 CA VAL 29 12.068 1.133 11.050 1.00 57.26 C \ ATOM 223 CB VAL 29 11.584 0.210 9.976 1.00 57.26 C \ ATOM 224 CG1 VAL 29 12.272 -1.152 10.177 1.00 57.26 C \ ATOM 225 CG2 VAL 29 10.049 0.146 10.036 1.00 57.26 C \ ATOM 226 C VAL 29 13.551 1.135 10.976 1.00 57.26 C \ ATOM 227 O VAL 29 14.212 0.379 11.688 1.00 57.26 O \ ATOM 228 N GLU 30 14.112 1.989 10.102 1.00213.39 N \ ATOM 229 CA GLU 30 15.534 1.987 9.961 1.00213.39 C \ ATOM 230 CB GLU 30 16.061 3.026 8.960 1.00213.39 C \ ATOM 231 CG GLU 30 17.505 2.767 8.535 1.00213.39 C \ ATOM 232 CD GLU 30 17.802 3.677 7.356 1.00213.39 C \ ATOM 233 OE1 GLU 30 17.344 4.850 7.377 1.00213.39 O \ ATOM 234 OE2 GLU 30 18.493 3.205 6.413 1.00213.39 O \ ATOM 235 C GLU 30 16.135 2.289 11.291 1.00213.39 C \ ATOM 236 O GLU 30 15.726 3.218 11.990 1.00213.39 O \ ATOM 237 N VAL 31 17.125 1.468 11.680 1.00 46.94 N \ ATOM 238 CA VAL 31 17.794 1.620 12.936 1.00 46.94 C \ ATOM 239 CB VAL 31 18.138 0.302 13.569 1.00 46.94 C \ ATOM 240 CG1 VAL 31 18.906 0.547 14.880 1.00 46.94 C \ ATOM 241 CG2 VAL 31 16.838 -0.496 13.753 1.00 46.94 C \ ATOM 242 C VAL 31 19.110 2.324 12.631 1.00 46.94 C \ ATOM 243 O VAL 31 19.390 3.372 13.271 1.00 46.94 O \ ATOM 244 OXT VAL 31 19.857 1.823 11.749 1.00 46.94 O \ TER 245 VAL 31 \ END \ \ ""","model_5") cmd.show_as("cartoon" ,"model_5") cmd.spectrum(expression="count",selection="model_5_aln",byres=2)