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cmd.read_pdbstr(""""\
EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/08 21:38:32 \
REMARK 6 MODELLER OBJECTIVE FUNCTION: 43.4469 \
REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 37.500 \
ATOM 1 N LYS 1 -3.996 19.421 -10.252 1.00103.11 N \
ATOM 2 CA LYS 1 -3.278 19.386 -8.960 1.00103.11 C \
ATOM 3 CB LYS 1 -3.688 20.583 -8.091 1.00103.11 C \
ATOM 4 CG LYS 1 -3.253 21.932 -8.667 1.00103.11 C \
ATOM 5 CD LYS 1 -1.741 22.069 -8.854 1.00103.11 C \
ATOM 6 CE LYS 1 -1.244 21.550 -10.204 1.00103.11 C \
ATOM 7 NZ LYS 1 0.205 21.815 -10.350 1.00103.11 N \
ATOM 8 C LYS 1 -3.634 18.134 -8.241 1.00103.11 C \
ATOM 9 O LYS 1 -3.306 17.038 -8.692 1.00103.11 O \
ATOM 10 N GLU 2 -4.327 18.262 -7.095 1.00127.35 N \
ATOM 11 CA GLU 2 -4.690 17.078 -6.385 1.00127.35 C \
ATOM 12 CB GLU 2 -4.932 17.302 -4.881 1.00127.35 C \
ATOM 13 CG GLU 2 -3.691 17.709 -4.083 1.00127.35 C \
ATOM 14 CD GLU 2 -4.112 17.796 -2.621 1.00127.35 C \
ATOM 15 OE1 GLU 2 -5.033 18.600 -2.311 1.00127.35 O \
ATOM 16 OE2 GLU 2 -3.524 17.046 -1.798 1.00127.35 O \
ATOM 17 C GLU 2 -5.978 16.606 -6.969 1.00127.35 C \
ATOM 18 O GLU 2 -7.029 17.213 -6.778 1.00127.35 O \
ATOM 19 N LEU 3 -5.910 15.509 -7.739 1.00187.91 N \
ATOM 20 CA LEU 3 -7.081 14.917 -8.313 1.00187.91 C \
ATOM 21 CB LEU 3 -6.762 13.793 -9.300 1.00187.91 C \
ATOM 22 CG LEU 3 -6.029 14.305 -10.545 1.00187.91 C \
ATOM 23 CD1 LEU 3 -4.644 14.864 -10.188 1.00187.91 C \
ATOM 24 CD2 LEU 3 -5.997 13.226 -11.632 1.00187.91 C \
ATOM 25 C LEU 3 -7.932 14.347 -7.224 1.00187.91 C \
ATOM 26 O LEU 3 -9.156 14.469 -7.270 1.00187.91 O \
ATOM 27 N PRO 4 -7.339 13.746 -6.230 1.00149.61 N \
ATOM 28 CA PRO 4 -8.147 13.202 -5.180 1.00149.61 C \
ATOM 29 CD PRO 4 -6.143 12.938 -6.438 1.00149.61 C \
ATOM 30 CB PRO 4 -7.211 12.345 -4.336 1.00149.61 C \
ATOM 31 CG PRO 4 -6.185 11.837 -5.363 1.00149.61 C \
ATOM 32 C PRO 4 -8.828 14.302 -4.451 1.00149.61 C \
ATOM 33 O PRO 4 -8.469 15.461 -4.641 1.00149.61 O \
ATOM 34 N ALA 5 -9.809 13.939 -3.604 1.00 68.29 N \
ATOM 35 CA ALA 5 -10.632 14.870 -2.897 1.00 68.29 C \
ATOM 36 CB ALA 5 -11.595 14.182 -1.915 1.00 68.29 C \
ATOM 37 C ALA 5 -9.727 15.747 -2.104 1.00 68.29 C \
ATOM 38 O ALA 5 -10.000 16.929 -1.905 1.00 68.29 O \
ATOM 39 N GLY 6 -8.605 15.184 -1.636 1.00213.21 N \
ATOM 40 CA GLY 6 -7.713 15.938 -0.815 1.00213.21 C \
ATOM 41 C GLY 6 -7.808 15.287 0.510 1.00213.21 C \
ATOM 42 O GLY 6 -6.925 15.417 1.356 1.00213.21 O \
ATOM 43 N ALA 7 -8.924 14.568 0.719 1.00 69.71 N \
ATOM 44 CA ALA 7 -9.019 13.785 1.903 1.00 69.71 C \
ATOM 45 CB ALA 7 -10.342 13.011 2.018 1.00 69.71 C \
ATOM 46 C ALA 7 -7.927 12.788 1.742 1.00 69.71 C \
ATOM 47 O ALA 7 -7.184 12.501 2.678 1.00 69.71 O \
ATOM 48 N ILE 8 -7.792 12.273 0.502 1.00 88.28 N \
ATOM 49 CA ILE 8 -6.787 11.313 0.152 1.00 88.28 C \
ATOM 50 CB ILE 8 -5.392 11.791 0.436 1.00 88.28 C \
ATOM 51 CG2 ILE 8 -4.421 10.632 0.148 1.00 88.28 C \
ATOM 52 CG1 ILE 8 -5.092 13.066 -0.374 1.00 88.28 C \
ATOM 53 CD1 ILE 8 -5.197 12.872 -1.887 1.00 88.28 C \
ATOM 54 C ILE 8 -7.033 10.025 0.926 1.00 88.28 C \
ATOM 55 O ILE 8 -6.881 10.034 2.175 1.00 88.28 O \
ATOM 56 OXT ILE 8 -7.374 9.007 0.265 1.00 88.28 O \
TER 57 ILE 8 \
END \
\
""","model_5")
cmd.show_as("cartoon" ,"model_5")
cmd.spectrum(expression="count",selection="model_5_aln",byres=2)