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cmd.read_pdbstr(""""\
ATOM 4088 N GLY V 202 -26.389 37.561 -24.886 1.00 18.86 N \
ATOM 4089 CA GLY V 202 -27.199 36.586 -24.093 1.00 17.59 C \
ATOM 4090 C GLY V 202 -26.385 35.354 -23.734 1.00 16.36 C \
ATOM 4091 O GLY V 202 -25.428 35.019 -24.455 1.00 16.92 O \
ATOM 4092 N PRO V 203 -26.791 34.640 -22.667 1.00 15.02 N \
ATOM 4093 CA PRO V 203 -25.981 33.544 -22.161 1.00 13.52 C \
ATOM 4094 C PRO V 203 -25.820 32.461 -23.216 1.00 11.37 C \
ATOM 4095 O PRO V 203 -26.739 32.245 -24.050 1.00 12.15 O \
ATOM 4096 CB PRO V 203 -26.808 33.005 -20.986 1.00 13.40 C \
ATOM 4097 CG PRO V 203 -27.652 34.159 -20.569 1.00 14.98 C \
ATOM 4098 CD PRO V 203 -28.031 34.777 -21.882 1.00 15.18 C \
ATOM 4099 N PRO V 204 -24.657 31.794 -23.221 1.00 10.07 N \
ATOM 4100 CA PRO V 204 -24.467 30.674 -24.138 1.00 9.49 C \
ATOM 4101 C PRO V 204 -25.324 29.488 -23.664 1.00 8.12 C \
ATOM 4102 O PRO V 204 -25.847 29.492 -22.538 1.00 8.62 O \
ATOM 4103 CB PRO V 204 -22.981 30.354 -23.987 1.00 10.21 C \
ATOM 4104 CG PRO V 204 -22.681 30.698 -22.514 1.00 10.61 C \
ATOM 4105 CD PRO V 204 -23.495 31.985 -22.319 1.00 10.62 C \
ATOM 4106 N PRO V 205 -25.488 28.469 -24.504 1.00 7.09 N \
ATOM 4107 CA PRO V 205 -26.189 27.252 -24.089 1.00 6.65 C \
ATOM 4108 C PRO V 205 -25.538 26.599 -22.879 1.00 6.72 C \
ATOM 4109 O PRO V 205 -24.330 26.711 -22.683 1.00 9.46 O \
ATOM 4110 CB PRO V 205 -26.042 26.358 -25.314 1.00 6.63 C \
ATOM 4111 CG PRO V 205 -25.942 27.345 -26.475 1.00 8.12 C \
ATOM 4112 CD PRO V 205 -25.075 28.425 -25.917 1.00 7.07 C \
ATOM 4113 N ALA V 206 -26.337 25.979 -22.025 1.00 5.63 N \
ATOM 4114 CA ALA V 206 -25.789 25.325 -20.841 1.00 4.90 C \
ATOM 4115 C ALA V 206 -25.354 23.910 -21.196 1.00 4.73 C \
ATOM 4116 O ALA V 206 -26.073 23.219 -21.920 1.00 5.84 O \
ATOM 4117 CB ALA V 206 -26.813 25.291 -19.714 1.00 5.87 C \
ATOM 4118 N PRO V 207 -24.207 23.467 -20.658 1.00 4.35 N \
ATOM 4119 CA PRO V 207 -23.789 22.080 -20.896 1.00 3.80 C \
ATOM 4120 C PRO V 207 -24.655 21.173 -19.990 1.00 4.05 C \
ATOM 4121 O PRO V 207 -25.213 21.651 -18.993 1.00 4.62 O \
ATOM 4122 CB PRO V 207 -22.326 22.079 -20.442 1.00 4.78 C \
ATOM 4123 CG PRO V 207 -22.286 23.138 -19.310 1.00 3.77 C \
ATOM 4124 CD PRO V 207 -23.322 24.178 -19.706 1.00 4.05 C \
ATOM 4125 N PRO V 208 -24.784 19.890 -20.318 1.00 2.96 N \
ATOM 4126 CA PRO V 208 -25.597 19.023 -19.456 1.00 4.75 C \
ATOM 4127 C PRO V 208 -25.143 18.989 -17.999 1.00 5.20 C \
ATOM 4128 O PRO V 208 -23.937 19.099 -17.666 1.00 4.84 O \
ATOM 4129 CB PRO V 208 -25.407 17.633 -20.041 1.00 5.75 C \
ATOM 4130 CG PRO V 208 -24.741 17.814 -21.369 1.00 7.96 C \
ATOM 4131 CD PRO V 208 -24.199 19.179 -21.476 1.00 3.74 C \
ATOM 4132 N LEU V 209 -26.125 18.828 -17.112 1.00 5.78 N \
ATOM 4133 CA LEU V 209 -25.853 18.670 -15.684 1.00 7.83 C \
ATOM 4134 C LEU V 209 -25.114 17.349 -15.419 1.00 9.76 C \
ATOM 4135 O LEU V 209 -25.129 16.483 -16.267 1.00 9.94 O \
ATOM 4136 CB LEU V 209 -27.192 18.648 -14.958 1.00 7.59 C \
ATOM 4137 CG LEU V 209 -27.664 20.027 -14.525 1.00 10.23 C \
ATOM 4138 CD1 LEU V 209 -29.103 19.796 -14.030 1.00 9.78 C \
ATOM 4139 CD2 LEU V 209 -26.789 20.683 -13.432 1.00 10.80 C \
ATOM 4140 N PRO V 210 -24.506 17.201 -14.217 1.00 13.73 N \
ATOM 4141 CA PRO V 210 -23.927 15.910 -13.841 1.00 16.08 C \
ATOM 4142 C PRO V 210 -25.011 14.819 -13.869 1.00 18.27 C \
ATOM 4143 O PRO V 210 -26.164 15.096 -13.504 1.00 18.53 O \
ATOM 4144 CB PRO V 210 -23.423 16.138 -12.410 1.00 16.65 C \
ATOM 4145 CG PRO V 210 -23.382 17.581 -12.205 1.00 16.26 C \
ATOM 4146 CD PRO V 210 -24.375 18.216 -13.167 1.00 14.37 C \
ATOM 4147 N ALA V 211 -24.655 13.627 -14.342 1.00 19.92 N \
ATOM 4148 CA ALA V 211 -25.588 12.507 -14.387 1.00 21.63 C \
ATOM 4149 C ALA V 211 -25.205 11.414 -13.387 1.00 23.31 C \
ATOM 4150 O ALA V 211 -25.736 10.305 -13.438 1.00 23.96 O \
ATOM 4151 CB ALA V 211 -25.681 11.947 -15.774 1.00 21.47 C \
ATOM 4152 N ALA V 212 -24.294 11.733 -12.477 1.00 24.93 N \
ATOM 4153 CA ALA V 212 -23.926 10.797 -11.434 1.00 26.37 C \
ATOM 4154 C ALA V 212 -24.487 11.292 -10.118 1.00 26.87 C \
ATOM 4155 O ALA V 212 -25.141 10.530 -9.403 1.00 28.16 O \
ATOM 4156 CB ALA V 212 -22.411 10.615 -11.360 1.00 27.02 C \
ATOM 4157 N ALA V 222 -32.383 29.484 14.820 1.00 24.08 N \
ATOM 4158 CA ALA V 222 -33.199 30.547 15.383 1.00 23.29 C \
ATOM 4159 C ALA V 222 -32.596 31.131 16.672 1.00 21.60 C \
ATOM 4160 O ALA V 222 -32.281 32.325 16.685 1.00 22.43 O \
ATOM 4161 CB ALA V 222 -34.648 30.099 15.569 1.00 24.42 C \
ATOM 4162 N PRO V 223 -32.423 30.311 17.752 1.00 20.05 N \
ATOM 4163 CA PRO V 223 -31.727 30.857 18.918 1.00 18.32 C \
ATOM 4164 C PRO V 223 -30.242 31.138 18.671 1.00 16.07 C \
ATOM 4165 O PRO V 223 -29.705 32.055 19.279 1.00 16.39 O \
ATOM 4166 CB PRO V 223 -31.881 29.751 19.968 1.00 17.95 C \
ATOM 4167 CG PRO V 223 -32.026 28.537 19.240 1.00 20.10 C \
ATOM 4168 CD PRO V 223 -32.843 28.915 18.009 1.00 20.34 C \
ATOM 4169 N GLY V 224 -29.611 30.352 17.800 1.00 14.03 N \
ATOM 4170 CA GLY V 224 -28.226 30.599 17.374 1.00 13.01 C \
ATOM 4171 C GLY V 224 -27.226 29.704 18.090 1.00 12.57 C \
ATOM 4172 O GLY V 224 -27.536 29.042 19.090 1.00 11.74 O \
ATOM 4173 N LEU V 225 -26.008 29.696 17.583 1.00 10.08 N \
ATOM 4174 CA LEU V 225 -24.971 28.810 18.051 1.00 9.56 C \
ATOM 4175 C LEU V 225 -24.533 29.121 19.500 1.00 8.42 C \
ATOM 4176 O LEU V 225 -24.286 28.202 20.295 1.00 8.66 O \
ATOM 4177 CB LEU V 225 -23.764 28.853 17.087 1.00 9.46 C \
ATOM 4178 CG LEU V 225 -22.550 27.998 17.482 1.00 12.01 C \
ATOM 4179 CD1 LEU V 225 -22.859 26.536 17.707 1.00 14.24 C \
ATOM 4180 CD2 LEU V 225 -21.346 28.200 16.502 1.00 12.11 C \
ATOM 4181 N ALA V 226 -24.449 30.409 19.852 1.00 7.85 N \
ATOM 4182 CA ALA V 226 -24.075 30.738 21.227 1.00 6.80 C \
ATOM 4183 C ALA V 226 -25.092 30.134 22.223 1.00 5.76 C \
ATOM 4184 O ALA V 226 -24.695 29.694 23.321 1.00 6.11 O \
ATOM 4185 CB ALA V 226 -23.922 32.258 21.434 1.00 6.42 C \
ATOM 4186 N ALA V 227 -26.377 30.110 21.864 1.00 5.85 N \
ATOM 4187 CA ALA V 227 -27.388 29.510 22.754 1.00 4.89 C \
ATOM 4188 C ALA V 227 -27.204 28.015 22.898 1.00 4.88 C \
ATOM 4189 O ALA V 227 -27.366 27.470 24.010 1.00 4.72 O \
ATOM 4190 CB ALA V 227 -28.784 29.810 22.239 1.00 5.58 C \
ATOM 4191 N ALA V 228 -26.856 27.317 21.814 1.00 4.56 N \
ATOM 4192 CA ALA V 228 -26.523 25.876 21.946 1.00 4.50 C \
ATOM 4193 C ALA V 228 -25.277 25.647 22.794 1.00 4.57 C \
ATOM 4194 O ALA V 228 -25.202 24.680 23.603 1.00 5.23 O \
ATOM 4195 CB ALA V 228 -26.304 25.216 20.576 1.00 5.82 C \
ATOM 4196 N ILE V 229 -24.250 26.498 22.582 1.00 4.65 N \
ATOM 4197 CA ILE V 229 -23.056 26.383 23.428 1.00 4.38 C \
ATOM 4198 C ILE V 229 -23.409 26.532 24.914 1.00 4.66 C \
ATOM 4199 O ILE V 229 -22.972 25.750 25.759 1.00 6.16 O \
ATOM 4200 CB ILE V 229 -21.967 27.416 23.035 1.00 5.51 C \
ATOM 4201 CG1 ILE V 229 -21.354 26.998 21.701 1.00 6.36 C \
ATOM 4202 CG2 ILE V 229 -20.920 27.510 24.155 1.00 5.89 C \
ATOM 4203 CD1 ILE V 229 -20.611 28.107 21.014 1.00 7.88 C \
ATOM 4204 N ALA V 230 -24.202 27.548 25.228 1.00 4.35 N \
ATOM 4205 CA ALA V 230 -24.536 27.816 26.628 1.00 4.42 C \
ATOM 4206 C ALA V 230 -25.261 26.633 27.241 1.00 4.89 C \
ATOM 4207 O ALA V 230 -25.058 26.324 28.423 1.00 5.80 O \
ATOM 4208 CB ALA V 230 -25.368 29.064 26.707 1.00 4.90 C \
ATOM 4209 N GLY V 231 -26.125 25.977 26.467 1.00 4.37 N \
ATOM 4210 CA GLY V 231 -26.892 24.874 26.990 1.00 5.69 C \
ATOM 4211 C GLY V 231 -26.190 23.544 27.032 1.00 6.55 C \
ATOM 4212 O GLY V 231 -26.781 22.562 27.487 1.00 7.02 O \
ATOM 4213 N ALA V 232 -24.930 23.502 26.580 1.00 7.15 N \
ATOM 4214 CA ALA V 232 -24.185 22.256 26.606 1.00 8.72 C \
ATOM 4215 C ALA V 232 -23.731 22.010 28.048 1.00 9.72 C \
ATOM 4216 O ALA V 232 -22.979 22.802 28.620 1.00 11.32 O \
ATOM 4217 CB ALA V 232 -22.975 22.305 25.647 1.00 8.64 C \
ATOM 4218 N LYS V 233 -24.203 20.928 28.635 1.00 9.66 N \
ATOM 4219 CA LYS V 233 -23.889 20.631 30.021 1.00 10.33 C \
ATOM 4220 C LYS V 233 -22.823 19.532 30.040 1.00 10.09 C \
ATOM 4221 O LYS V 233 -23.119 18.342 29.857 1.00 10.75 O \
ATOM 4222 CB LYS V 233 -25.143 20.208 30.803 1.00 11.74 C \
ATOM 4223 CG LYS V 233 -26.182 21.321 30.919 1.00 15.45 C \
ATOM 4224 CD LYS V 233 -27.159 21.084 32.055 1.00 18.02 C \
ATOM 4225 CE LYS V 233 -26.413 20.832 33.387 1.00 21.69 C \
ATOM 4226 NZ LYS V 233 -27.237 20.080 34.374 1.00 26.13 N \
ATOM 4227 N LEU V 234 -21.580 19.955 30.250 1.00 8.06 N \
ATOM 4228 CA LEU V 234 -20.469 19.010 30.265 1.00 7.34 C \
ATOM 4229 C LEU V 234 -20.444 18.202 31.538 1.00 7.72 C \
ATOM 4230 O LEU V 234 -20.757 18.690 32.633 1.00 9.06 O \
ATOM 4231 CB LEU V 234 -19.145 19.749 30.080 1.00 6.76 C \
ATOM 4232 CG LEU V 234 -19.048 20.581 28.810 1.00 6.04 C \
ATOM 4233 CD1 LEU V 234 -17.703 21.285 28.765 1.00 7.71 C \
ATOM 4234 CD2 LEU V 234 -19.291 19.750 27.535 1.00 5.48 C \
ATOM 4235 N ARG V 235 -20.061 16.953 31.400 1.00 7.25 N \
ATOM 4236 CA ARG V 235 -20.110 16.053 32.553 1.00 9.64 C \
ATOM 4237 C ARG V 235 -18.752 15.770 33.165 1.00 9.37 C \
ATOM 4238 O ARG V 235 -17.724 15.815 32.483 1.00 6.95 O \
ATOM 4239 CB ARG V 235 -20.891 14.780 32.217 1.00 10.89 C \
ATOM 4240 CG ARG V 235 -20.461 14.000 31.040 1.00 16.86 C \
ATOM 4241 CD ARG V 235 -21.726 13.478 30.321 1.00 25.88 C \
ATOM 4242 NE ARG V 235 -22.383 14.555 29.565 1.00 30.06 N \
ATOM 4243 CZ ARG V 235 -22.301 14.693 28.241 1.00 32.12 C \
ATOM 4244 NH1 ARG V 235 -21.612 13.801 27.527 1.00 32.30 N \
ATOM 4245 NH2 ARG V 235 -22.915 15.714 27.633 1.00 33.71 N \
ATOM 4246 N LYS V 236 -18.745 15.523 34.467 1.00 10.57 N \
ATOM 4247 CA LYS V 236 -17.491 15.240 35.141 1.00 13.06 C \
ATOM 4248 C LYS V 236 -16.875 13.943 34.602 1.00 14.91 C \
ATOM 4249 O LYS V 236 -17.568 13.065 34.066 1.00 15.44 O \
ATOM 4250 CB LYS V 236 -17.646 15.230 36.664 1.00 12.81 C \
ATOM 4251 CG LYS V 236 -18.510 14.108 37.179 1.00 15.38 C \
ATOM 4252 CD LYS V 236 -18.468 14.039 38.712 1.00 17.52 C \
ATOM 4253 CE LYS V 236 -19.045 12.723 39.165 1.00 17.38 C \
ATOM 4254 NZ LYS V 236 -18.850 12.496 40.627 1.00 17.28 N \
ATOM 4255 N VAL V 237 -15.555 13.877 34.685 1.00 17.20 N \
ATOM 4256 CA VAL V 237 -14.807 12.682 34.331 1.00 19.02 C \
ATOM 4257 C VAL V 237 -14.669 11.859 35.638 1.00 20.34 C \
ATOM 4258 O VAL V 237 -14.085 12.343 36.618 1.00 21.50 O \
ATOM 4259 CB VAL V 237 -13.411 13.057 33.726 1.00 18.77 C \
ATOM 4260 CG1 VAL V 237 -12.592 11.822 33.415 1.00 19.01 C \
ATOM 4261 CG2 VAL V 237 -13.549 13.946 32.469 1.00 19.25 C \
ATOM 4262 N SER V 238 -15.205 10.638 35.724 1.00 21.75 N \
ATOM 4263 CA SER V 238 -16.010 9.908 34.734 1.00 22.52 C \
ATOM 4264 C SER V 238 -15.937 8.415 35.052 1.00 22.48 C \
ATOM 4265 O SER V 238 -15.512 8.008 36.144 1.00 23.32 O \
ATOM 4266 CB SER V 238 -15.554 10.138 33.295 1.00 21.99 C \
ATOM 4267 OG SER V 238 -16.376 9.425 32.393 1.00 24.22 O \
HETATM 5002 O HOH V 245 -23.025 30.924 25.023 1.00 15.62 O \
HETATM 5003 O HOH V 246 -27.304 22.938 23.749 1.00 13.47 O \
HETATM 5004 O HOH V 247 -28.125 21.639 -20.718 1.00 12.08 O \
HETATM 5005 O HOH V 248 -28.919 22.402 29.139 1.00 13.27 O \
HETATM 5006 O HOH V 249 -21.249 25.847 27.778 1.00 21.80 O \
HETATM 5007 O HOH V 250 -20.777 22.616 31.305 1.00 18.67 O \
HETATM 5008 O HOH V 251 -21.647 18.853 -19.140 1.00 12.49 O \
HETATM 5009 O HOH V 252 -30.101 27.897 16.375 1.00 21.26 O \
HETATM 5010 O HOH V 253 -27.109 15.423 -17.587 1.00 20.14 O \
HETATM 5011 O HOH V 254 -25.657 31.267 15.130 1.00 17.66 O \
HETATM 5012 O HOH V 255 -28.777 28.337 13.937 1.00 23.45 O \
HETATM 5013 O HOH V 256 -28.998 19.498 -17.949 1.00 19.04 O \
HETATM 5014 O HOH V 257 -25.084 33.039 18.458 1.00 22.77 O \
HETATM 5015 O HOH V 258 -29.637 19.955 30.407 1.00 21.53 O \
HETATM 5016 O HOH V 259 -21.781 17.056 -23.186 1.00 32.20 O \
HETATM 5017 O HOH V 260 -28.742 15.769 -19.919 1.00 21.50 O \
HETATM 5018 O HOH V 261 -18.187 22.674 32.837 1.00 31.94 O \
HETATM 5019 O HOH V 262 -20.329 18.613 -21.655 1.00 28.96 O \
HETATM 5020 O HOH V 263 -28.950 26.837 18.434 1.00 21.42 O \
HETATM 5021 O HOH V 264 -26.362 19.340 27.489 1.00 21.32 O \
HETATM 5022 O HOH V 265 -30.769 27.620 12.400 1.00 30.63 O \
HETATM 5023 O HOH V 266 -23.126 15.329 -17.732 1.00 31.65 O \
HETATM 5024 O HOH V 267 -25.842 34.318 -28.728 1.00 31.46 O \
HETATM 5025 O HOH V 268 -24.854 32.471 -27.435 1.00 37.44 O \
HETATM 5026 O HOH V 269 -19.991 24.006 28.867 1.00 31.51 O \
HETATM 5027 O HOH V 270 -14.614 13.993 39.150 1.00 29.98 O \
HETATM 5028 O HOH V 271 -21.847 29.339 -27.343 1.00 30.86 O \
HETATM 5029 O HOH V 272 -27.345 32.537 20.306 1.00 15.23 O \
HETATM 5030 O HOH V 273 -26.954 20.502 24.959 1.00 30.27 O \
HETATM 5031 O HOH V 274 -27.425 16.029 -11.470 1.00 22.58 O \
HETATM 5032 O HOH V 275 -24.847 16.724 30.598 1.00 32.30 O \
\
""","2pbd")
cmd.hide("everything")
cmd.select("2pbd_V","/2pbd//V")
cmd.show_as("cartoon" ,"2pbd_V")
cmd.color("white" ,"2pbd_V")
cmd.zoom("2pbd_V", animate=-1)
cmd.orient(selection="2pbd_V", state=0, animate=0)
cmd.select("2pbd_V_aln","resi 231-242")
cmd.spectrum(expression="count",selection="2pbd_V_aln",byres=2)
cmd.disable("2pbd_V_aln")