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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/12 00:12:07 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 60.4571 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 19.048 \ ATOM 1 N ALA 1 1.319 -2.267 -3.660 1.00 20.13 N \ ATOM 2 CA ALA 1 0.213 -1.801 -2.802 1.00 20.13 C \ ATOM 3 CB ALA 1 -0.181 -0.358 -3.161 1.00 20.13 C \ ATOM 4 C ALA 1 -0.979 -2.662 -3.015 1.00 20.13 C \ ATOM 5 O ALA 1 -0.870 -3.844 -3.338 1.00 20.13 O \ ATOM 6 N ALA 2 -2.160 -2.063 -2.810 1.00 33.58 N \ ATOM 7 CA ALA 2 -3.388 -2.756 -3.007 1.00 33.58 C \ ATOM 8 CB ALA 2 -4.015 -3.255 -1.700 1.00 33.58 C \ ATOM 9 C ALA 2 -4.299 -1.732 -3.570 1.00 33.58 C \ ATOM 10 O ALA 2 -4.079 -0.536 -3.382 1.00 33.58 O \ ATOM 11 N PHE 3 -5.339 -2.161 -4.302 1.00109.64 N \ ATOM 12 CA PHE 3 -6.181 -1.155 -4.867 1.00109.64 C \ ATOM 13 CB PHE 3 -5.923 -0.968 -6.368 1.00109.64 C \ ATOM 14 CG PHE 3 -4.552 -0.401 -6.498 1.00109.64 C \ ATOM 15 CD1 PHE 3 -3.456 -1.230 -6.547 1.00109.64 C \ ATOM 16 CD2 PHE 3 -4.359 0.960 -6.558 1.00109.64 C \ ATOM 17 CE1 PHE 3 -2.188 -0.705 -6.659 1.00109.64 C \ ATOM 18 CE2 PHE 3 -3.096 1.493 -6.673 1.00109.64 C \ ATOM 19 CZ PHE 3 -2.009 0.656 -6.726 1.00109.64 C \ ATOM 20 C PHE 3 -7.603 -1.556 -4.684 1.00109.64 C \ ATOM 21 O PHE 3 -7.926 -2.742 -4.717 1.00109.64 O \ ATOM 22 N CYS 4 -8.483 -0.558 -4.445 1.00 73.43 N \ ATOM 23 CA CYS 4 -9.886 -0.818 -4.294 1.00 73.43 C \ ATOM 24 CB CYS 4 -10.711 0.440 -3.975 1.00 73.43 C \ ATOM 25 SG CYS 4 -10.372 1.107 -2.324 1.00 73.43 S \ ATOM 26 C CYS 4 -10.409 -1.333 -5.593 1.00 73.43 C \ ATOM 27 O CYS 4 -11.074 -2.368 -5.639 1.00 73.43 O \ ATOM 28 N THR 5 -10.104 -0.624 -6.699 1.00 91.47 N \ ATOM 29 CA THR 5 -10.606 -1.040 -7.972 1.00 91.47 C \ ATOM 30 CB THR 5 -11.739 -0.200 -8.493 1.00 91.47 C \ ATOM 31 OG1 THR 5 -12.221 -0.741 -9.714 1.00 91.47 O \ ATOM 32 CG2 THR 5 -11.256 1.245 -8.708 1.00 91.47 C \ ATOM 33 C THR 5 -9.507 -0.942 -8.967 1.00 91.47 C \ ATOM 34 O THR 5 -8.504 -0.267 -8.750 1.00 91.47 O \ ATOM 35 N GLN 6 -9.689 -1.651 -10.093 1.00 43.58 N \ ATOM 36 CA GLN 6 -8.763 -1.677 -11.184 1.00 43.58 C \ ATOM 37 CB GLN 6 -9.236 -2.618 -12.303 1.00 43.58 C \ ATOM 38 CG GLN 6 -9.505 -4.048 -11.830 1.00 43.58 C \ ATOM 39 CD GLN 6 -10.265 -4.773 -12.931 1.00 43.58 C \ ATOM 40 OE1 GLN 6 -10.413 -4.267 -14.043 1.00 43.58 O \ ATOM 41 NE2 GLN 6 -10.771 -5.994 -12.604 1.00 43.58 N \ ATOM 42 C GLN 6 -8.757 -0.290 -11.740 1.00 43.58 C \ ATOM 43 O GLN 6 -7.747 0.206 -12.234 1.00 43.58 O \ ATOM 44 N ASP 7 -9.926 0.368 -11.655 1.00 82.66 N \ ATOM 45 CA ASP 7 -10.153 1.672 -12.195 1.00 82.66 C \ ATOM 46 CB ASP 7 -11.575 2.147 -11.836 1.00 82.66 C \ ATOM 47 CG ASP 7 -11.854 3.510 -12.439 1.00 82.66 C \ ATOM 48 OD1 ASP 7 -11.139 4.475 -12.064 1.00 82.66 O \ ATOM 49 OD2 ASP 7 -12.785 3.607 -13.284 1.00 82.66 O \ ATOM 50 C ASP 7 -9.158 2.615 -11.598 1.00 82.66 C \ ATOM 51 O ASP 7 -8.497 3.359 -12.321 1.00 82.66 O \ ATOM 52 N CYS 8 -9.002 2.583 -10.261 1.00 33.35 N \ ATOM 53 CA CYS 8 -8.096 3.453 -9.563 1.00 33.35 C \ ATOM 54 CB CYS 8 -8.235 3.332 -8.034 1.00 33.35 C \ ATOM 55 SG CYS 8 -9.889 3.825 -7.455 1.00 33.35 S \ ATOM 56 C CYS 8 -6.686 3.103 -9.930 1.00 33.35 C \ ATOM 57 O CYS 8 -5.839 3.980 -10.104 1.00 33.35 O \ ATOM 58 N PHE 9 -6.413 1.797 -10.097 1.00 85.18 N \ ATOM 59 CA PHE 9 -5.084 1.323 -10.342 1.00 85.18 C \ ATOM 60 CB PHE 9 -5.027 -0.191 -10.593 1.00 85.18 C \ ATOM 61 CG PHE 9 -3.586 -0.551 -10.665 1.00 85.18 C \ ATOM 62 CD1 PHE 9 -2.900 -0.829 -9.511 1.00 85.18 C \ ATOM 63 CD2 PHE 9 -2.919 -0.601 -11.867 1.00 85.18 C \ ATOM 64 CE1 PHE 9 -1.569 -1.163 -9.545 1.00 85.18 C \ ATOM 65 CE2 PHE 9 -1.586 -0.934 -11.910 1.00 85.18 C \ ATOM 66 CZ PHE 9 -0.908 -1.214 -10.748 1.00 85.18 C \ ATOM 67 C PHE 9 -4.578 1.985 -11.575 1.00 85.18 C \ ATOM 68 O PHE 9 -3.440 2.447 -11.618 1.00 85.18 O \ ATOM 69 N LYS 10 -5.430 2.059 -12.608 1.00102.51 N \ ATOM 70 CA LYS 10 -5.045 2.640 -13.856 1.00102.51 C \ ATOM 71 CB LYS 10 -6.207 2.607 -14.858 1.00102.51 C \ ATOM 72 CG LYS 10 -5.892 3.203 -16.231 1.00102.51 C \ ATOM 73 CD LYS 10 -6.991 2.932 -17.262 1.00102.51 C \ ATOM 74 CE LYS 10 -7.819 4.163 -17.636 1.00102.51 C \ ATOM 75 NZ LYS 10 -7.372 4.694 -18.944 1.00102.51 N \ ATOM 76 C LYS 10 -4.671 4.074 -13.630 1.00102.51 C \ ATOM 77 O LYS 10 -3.649 4.538 -14.135 1.00102.51 O \ ATOM 78 N ALA 11 -5.478 4.823 -12.858 1.00 35.10 N \ ATOM 79 CA ALA 11 -5.167 6.212 -12.660 1.00 35.10 C \ ATOM 80 CB ALA 11 -6.221 6.933 -11.802 1.00 35.10 C \ ATOM 81 C ALA 11 -3.860 6.350 -11.934 1.00 35.10 C \ ATOM 82 O ALA 11 -2.976 7.097 -12.350 1.00 35.10 O \ ATOM 83 N SER 12 -3.708 5.586 -10.837 1.00 98.61 N \ ATOM 84 CA SER 12 -2.589 5.641 -9.936 1.00 98.61 C \ ATOM 85 CB SER 12 -2.917 4.975 -8.584 1.00 98.61 C \ ATOM 86 OG SER 12 -1.881 5.218 -7.644 1.00 98.61 O \ ATOM 87 C SER 12 -1.395 4.961 -10.543 1.00 98.61 C \ ATOM 88 O SER 12 -0.339 4.886 -9.923 1.00 98.61 O \ ATOM 89 N TRP 13 -1.558 4.429 -11.768 1.00 75.18 N \ ATOM 90 CA TRP 13 -0.585 3.688 -12.526 1.00 75.18 C \ ATOM 91 CB TRP 13 -1.235 3.118 -13.806 1.00 75.18 C \ ATOM 92 CG TRP 13 -0.333 2.643 -14.923 1.00 75.18 C \ ATOM 93 CD2 TRP 13 0.453 1.441 -14.929 1.00 75.18 C \ ATOM 94 CD1 TRP 13 -0.097 3.265 -16.113 1.00 75.18 C \ ATOM 95 NE1 TRP 13 0.770 2.518 -16.871 1.00 75.18 N \ ATOM 96 CE2 TRP 13 1.124 1.397 -16.153 1.00 75.18 C \ ATOM 97 CE3 TRP 13 0.607 0.457 -13.997 1.00 75.18 C \ ATOM 98 CZ2 TRP 13 1.961 0.365 -16.464 1.00 75.18 C \ ATOM 99 CZ3 TRP 13 1.454 -0.580 -14.315 1.00 75.18 C \ ATOM 100 CH2 TRP 13 2.118 -0.626 -15.523 1.00 75.18 C \ ATOM 101 C TRP 13 0.618 4.503 -12.877 1.00 75.18 C \ ATOM 102 O TRP 13 1.740 4.011 -12.770 1.00 75.18 O \ ATOM 103 N THR 14 0.442 5.770 -13.288 1.00105.29 N \ ATOM 104 CA THR 14 1.577 6.525 -13.733 1.00105.29 C \ ATOM 105 CB THR 14 1.212 7.928 -14.102 1.00105.29 C \ ATOM 106 OG1 THR 14 0.674 8.597 -12.971 1.00105.29 O \ ATOM 107 CG2 THR 14 0.181 7.885 -15.240 1.00105.29 C \ ATOM 108 C THR 14 2.601 6.619 -12.643 1.00105.29 C \ ATOM 109 O THR 14 3.781 6.365 -12.880 1.00105.29 O \ ATOM 110 N SER 15 2.177 7.006 -11.423 1.00 70.50 N \ ATOM 111 CA SER 15 3.087 7.176 -10.322 1.00 70.50 C \ ATOM 112 CB SER 15 2.460 7.919 -9.132 1.00 70.50 C \ ATOM 113 OG SER 15 3.444 8.155 -8.135 1.00 70.50 O \ ATOM 114 C SER 15 3.564 5.851 -9.806 1.00 70.50 C \ ATOM 115 O SER 15 4.739 5.680 -9.481 1.00 70.50 O \ ATOM 116 N HIS 16 2.659 4.862 -9.739 1.00 61.86 N \ ATOM 117 CA HIS 16 3.001 3.603 -9.152 1.00 61.86 C \ ATOM 118 ND1 HIS 16 2.861 1.236 -7.181 1.00 61.86 N \ ATOM 119 CG HIS 16 2.367 1.309 -8.467 1.00 61.86 C \ ATOM 120 CB HIS 16 1.866 2.576 -9.094 1.00 61.86 C \ ATOM 121 NE2 HIS 16 3.010 -0.813 -8.035 1.00 61.86 N \ ATOM 122 CD2 HIS 16 2.468 0.050 -8.974 1.00 61.86 C \ ATOM 123 CE1 HIS 16 3.230 -0.052 -6.976 1.00 61.86 C \ ATOM 124 C HIS 16 4.090 2.969 -9.932 1.00 61.86 C \ ATOM 125 O HIS 16 4.927 2.275 -9.358 1.00 61.86 O \ ATOM 126 N LYS 17 4.110 3.197 -11.255 1.00 89.72 N \ ATOM 127 CA LYS 17 5.087 2.562 -12.087 1.00 89.72 C \ ATOM 128 CB LYS 17 5.055 3.050 -13.543 1.00 89.72 C \ ATOM 129 CG LYS 17 5.626 4.459 -13.684 1.00 89.72 C \ ATOM 130 CD LYS 17 6.021 4.800 -15.116 1.00 89.72 C \ ATOM 131 CE LYS 17 6.925 6.027 -15.230 1.00 89.72 C \ ATOM 132 NZ LYS 17 7.460 6.111 -16.607 1.00 89.72 N \ ATOM 133 C LYS 17 6.430 2.933 -11.540 1.00 89.72 C \ ATOM 134 O LYS 17 7.361 2.131 -11.555 1.00 89.72 O \ ATOM 135 N SER 18 6.549 4.170 -11.025 1.00 29.81 N \ ATOM 136 CA SER 18 7.774 4.651 -10.455 1.00 29.81 C \ ATOM 137 CB SER 18 7.614 6.058 -9.853 1.00 29.81 C \ ATOM 138 OG SER 18 7.191 6.963 -10.860 1.00 29.81 O \ ATOM 139 C SER 18 8.180 3.744 -9.332 1.00 29.81 C \ ATOM 140 O SER 18 9.316 3.274 -9.292 1.00 29.81 O \ ATOM 141 N VAL 19 7.249 3.465 -8.399 1.00 32.17 N \ ATOM 142 CA VAL 19 7.524 2.621 -7.269 1.00 32.17 C \ ATOM 143 CB VAL 19 6.363 2.519 -6.316 1.00 32.17 C \ ATOM 144 CG1 VAL 19 6.682 1.460 -5.245 1.00 32.17 C \ ATOM 145 CG2 VAL 19 6.074 3.910 -5.725 1.00 32.17 C \ ATOM 146 C VAL 19 7.821 1.240 -7.762 1.00 32.17 C \ ATOM 147 O VAL 19 8.667 0.540 -7.209 1.00 32.17 O \ ATOM 148 N HIS 20 7.136 0.813 -8.839 1.00 57.85 N \ ATOM 149 CA HIS 20 7.265 -0.534 -9.305 1.00 57.85 C \ ATOM 150 ND1 HIS 20 6.291 -3.336 -10.051 1.00 57.85 N \ ATOM 151 CG HIS 20 6.466 -2.297 -10.937 1.00 57.85 C \ ATOM 152 CB HIS 20 6.422 -0.848 -10.552 1.00 57.85 C \ ATOM 153 NE2 HIS 20 6.608 -4.252 -12.054 1.00 57.85 N \ ATOM 154 CD2 HIS 20 6.656 -2.872 -12.155 1.00 57.85 C \ ATOM 155 CE1 HIS 20 6.387 -4.484 -10.772 1.00 57.85 C \ ATOM 156 C HIS 20 8.693 -0.865 -9.596 1.00 57.85 C \ ATOM 157 O HIS 20 9.506 -0.017 -9.964 1.00 57.85 O \ ATOM 158 N LEU 21 9.016 -2.154 -9.392 1.00 97.10 N \ ATOM 159 CA LEU 21 10.327 -2.698 -9.568 1.00 97.10 C \ ATOM 160 CB LEU 21 10.426 -4.102 -8.960 1.00 97.10 C \ ATOM 161 CG LEU 21 9.222 -4.988 -9.339 1.00 97.10 C \ ATOM 162 CD1 LEU 21 9.273 -5.459 -10.802 1.00 97.10 C \ ATOM 163 CD2 LEU 21 9.027 -6.124 -8.325 1.00 97.10 C \ ATOM 164 C LEU 21 10.655 -2.804 -11.049 1.00 97.10 C \ ATOM 165 O LEU 21 9.733 -2.660 -11.891 1.00 97.10 O \ ATOM 166 OXT LEU 21 11.856 -3.045 -11.348 1.00 97.10 O \ TER 167 LEU 21 \ END \ \ ""","model_2") cmd.show_as("cartoon" ,"model_2") cmd.spectrum(expression="count",selection="model_2_aln",byres=2)