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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/11 08:55:17 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 127.9872 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 44.828 \ ATOM 1 N ALA 1 18.515 3.599 -4.007 1.00 7.73 N \ ATOM 2 CA ALA 1 17.675 3.109 -5.126 1.00 7.73 C \ ATOM 3 CB ALA 1 17.436 1.596 -4.993 1.00 7.73 C \ ATOM 4 C ALA 1 16.354 3.802 -5.116 1.00 7.73 C \ ATOM 5 O ALA 1 16.212 4.882 -4.547 1.00 7.73 O \ ATOM 6 N ASP 2 15.353 3.195 -5.773 1.00 76.91 N \ ATOM 7 CA ASP 2 14.047 3.779 -5.817 1.00 76.91 C \ ATOM 8 CB ASP 2 13.083 3.022 -6.742 1.00 76.91 C \ ATOM 9 CG ASP 2 12.957 1.599 -6.221 1.00 76.91 C \ ATOM 10 OD1 ASP 2 14.016 0.956 -5.992 1.00 76.91 O \ ATOM 11 OD2 ASP 2 11.801 1.136 -6.035 1.00 76.91 O \ ATOM 12 C ASP 2 13.479 3.742 -4.440 1.00 76.91 C \ ATOM 13 O ASP 2 13.590 2.739 -3.737 1.00 76.91 O \ ATOM 14 N ARG 3 12.878 4.866 -4.009 1.00104.50 N \ ATOM 15 CA ARG 3 12.286 4.913 -2.706 1.00104.50 C \ ATOM 16 CB ARG 3 11.787 6.324 -2.340 1.00104.50 C \ ATOM 17 CG ARG 3 12.921 7.340 -2.170 1.00104.50 C \ ATOM 18 CD ARG 3 12.446 8.790 -2.049 1.00104.50 C \ ATOM 19 NE ARG 3 13.655 9.644 -1.890 1.00104.50 N \ ATOM 20 CZ ARG 3 13.980 10.158 -0.667 1.00104.50 C \ ATOM 21 NH1 ARG 3 13.181 9.920 0.413 1.00104.50 N \ ATOM 22 NH2 ARG 3 15.096 10.929 -0.529 1.00104.50 N \ ATOM 23 C ARG 3 11.118 3.979 -2.684 1.00104.50 C \ ATOM 24 O ARG 3 10.994 3.147 -1.786 1.00104.50 O \ ATOM 25 N SER 4 10.236 4.076 -3.701 1.00 86.73 N \ ATOM 26 CA SER 4 9.093 3.213 -3.724 1.00 86.73 C \ ATOM 27 CB SER 4 7.887 3.760 -2.939 1.00 86.73 C \ ATOM 28 OG SER 4 8.197 3.835 -1.556 1.00 86.73 O \ ATOM 29 C SER 4 8.649 3.048 -5.142 1.00 86.73 C \ ATOM 30 O SER 4 8.875 3.913 -5.987 1.00 86.73 O \ ATOM 31 N ILE 5 7.973 1.914 -5.418 1.00 49.23 N \ ATOM 32 CA ILE 5 7.497 1.584 -6.730 1.00 49.23 C \ ATOM 33 CB ILE 5 8.024 0.270 -7.240 1.00 49.23 C \ ATOM 34 CG2 ILE 5 7.314 -0.064 -8.561 1.00 49.23 C \ ATOM 35 CG1 ILE 5 9.553 0.315 -7.374 1.00 49.23 C \ ATOM 36 CD1 ILE 5 10.192 -1.061 -7.550 1.00 49.23 C \ ATOM 37 C ILE 5 6.012 1.434 -6.620 1.00 49.23 C \ ATOM 38 O ILE 5 5.497 1.095 -5.556 1.00 49.23 O \ ATOM 39 N CYS 6 5.279 1.702 -7.722 1.00 68.19 N \ ATOM 40 CA CYS 6 3.845 1.616 -7.666 1.00 68.19 C \ ATOM 41 CB CYS 6 3.168 2.846 -8.304 1.00 68.19 C \ ATOM 42 SG CYS 6 1.406 3.029 -7.890 1.00 68.19 S \ ATOM 43 C CYS 6 3.401 0.379 -8.416 1.00 68.19 C \ ATOM 44 O CYS 6 4.211 -0.512 -8.671 1.00 68.19 O \ ATOM 45 N SER 7 2.077 0.291 -8.718 1.00 98.29 N \ ATOM 46 CA SER 7 1.387 -0.760 -9.430 1.00 98.29 C \ ATOM 47 CB SER 7 -0.140 -0.629 -9.323 1.00 98.29 C \ ATOM 48 OG SER 7 -0.771 -1.683 -10.034 1.00 98.29 O \ ATOM 49 C SER 7 1.745 -0.696 -10.883 1.00 98.29 C \ ATOM 50 O SER 7 1.608 -1.672 -11.621 1.00 98.29 O \ ATOM 51 N PHE 8 2.232 0.475 -11.320 1.00119.64 N \ ATOM 52 CA PHE 8 2.618 0.744 -12.668 1.00119.64 C \ ATOM 53 CB PHE 8 3.189 2.168 -12.791 1.00119.64 C \ ATOM 54 CG PHE 8 3.483 2.532 -14.208 1.00119.64 C \ ATOM 55 CD1 PHE 8 4.589 2.029 -14.853 1.00119.64 C \ ATOM 56 CD2 PHE 8 2.668 3.418 -14.878 1.00119.64 C \ ATOM 57 CE1 PHE 8 4.861 2.385 -16.154 1.00119.64 C \ ATOM 58 CE2 PHE 8 2.935 3.781 -16.178 1.00119.64 C \ ATOM 59 CZ PHE 8 4.031 3.257 -16.819 1.00119.64 C \ ATOM 60 C PHE 8 3.709 -0.220 -12.993 1.00119.64 C \ ATOM 61 O PHE 8 3.849 -0.663 -14.132 1.00119.64 O \ ATOM 62 N ALA 9 4.545 -0.557 -11.999 1.00 53.08 N \ ATOM 63 CA ALA 9 5.631 -1.426 -12.325 1.00 53.08 C \ ATOM 64 CB ALA 9 6.518 -1.751 -11.113 1.00 53.08 C \ ATOM 65 C ALA 9 5.111 -2.731 -12.853 1.00 53.08 C \ ATOM 66 O ALA 9 5.530 -3.157 -13.928 1.00 53.08 O \ ATOM 67 N ALA 10 4.210 -3.419 -12.115 1.00 60.00 N \ ATOM 68 CA ALA 10 3.729 -4.676 -12.620 1.00 60.00 C \ ATOM 69 CB ALA 10 2.993 -5.495 -11.546 1.00 60.00 C \ ATOM 70 C ALA 10 2.772 -4.503 -13.764 1.00 60.00 C \ ATOM 71 O ALA 10 3.008 -4.986 -14.870 1.00 60.00 O \ ATOM 72 N ALA 11 1.670 -3.764 -13.518 1.00 46.22 N \ ATOM 73 CA ALA 11 0.614 -3.622 -14.484 1.00 46.22 C \ ATOM 74 CB ALA 11 -0.630 -2.929 -13.905 1.00 46.22 C \ ATOM 75 C ALA 11 1.085 -2.820 -15.645 1.00 46.22 C \ ATOM 76 O ALA 11 0.883 -3.189 -16.801 1.00 46.22 O \ ATOM 77 N GLY 12 1.770 -1.703 -15.349 1.00 36.14 N \ ATOM 78 CA GLY 12 2.241 -0.826 -16.379 1.00 36.14 C \ ATOM 79 C GLY 12 1.387 0.407 -16.408 1.00 36.14 C \ ATOM 80 O GLY 12 1.801 1.421 -16.962 1.00 36.14 O \ ATOM 81 N ASN 13 0.178 0.379 -15.813 1.00 63.90 N \ ATOM 82 CA ASN 13 -0.619 1.576 -15.853 1.00 63.90 C \ ATOM 83 CB ASN 13 -1.993 1.406 -16.527 1.00 63.90 C \ ATOM 84 CG ASN 13 -2.876 0.530 -15.652 1.00 63.90 C \ ATOM 85 OD1 ASN 13 -3.945 0.959 -15.222 1.00 63.90 O \ ATOM 86 ND2 ASN 13 -2.426 -0.723 -15.381 1.00 63.90 N \ ATOM 87 C ASN 13 -0.880 2.002 -14.444 1.00 63.90 C \ ATOM 88 O ASN 13 -0.772 1.201 -13.516 1.00 63.90 O \ ATOM 89 N CYS 14 -1.192 3.301 -14.247 1.00 55.24 N \ ATOM 90 CA CYS 14 -1.483 3.766 -12.921 1.00 55.24 C \ ATOM 91 CB CYS 14 -0.249 4.340 -12.201 1.00 55.24 C \ ATOM 92 SG CYS 14 -0.604 4.886 -10.504 1.00 55.24 S \ ATOM 93 C CYS 14 -2.503 4.858 -13.033 1.00 55.24 C \ ATOM 94 O CYS 14 -2.401 5.746 -13.877 1.00 55.24 O \ ATOM 95 N PRO 15 -3.510 4.788 -12.209 1.00 70.22 N \ ATOM 96 CA PRO 15 -4.567 5.761 -12.160 1.00 70.22 C \ ATOM 97 CD PRO 15 -3.597 3.798 -11.150 1.00 70.22 C \ ATOM 98 CB PRO 15 -5.557 5.225 -11.126 1.00 70.22 C \ ATOM 99 CG PRO 15 -4.690 4.339 -10.212 1.00 70.22 C \ ATOM 100 C PRO 15 -4.009 7.096 -11.772 1.00 70.22 C \ ATOM 101 O PRO 15 -4.607 8.113 -12.121 1.00 70.22 O \ ATOM 102 N ARG 16 -2.904 7.097 -10.999 1.00107.07 N \ ATOM 103 CA ARG 16 -2.235 8.278 -10.525 1.00107.07 C \ ATOM 104 CB ARG 16 -1.132 7.973 -9.498 1.00107.07 C \ ATOM 105 CG ARG 16 -1.620 7.522 -8.119 1.00107.07 C \ ATOM 106 CD ARG 16 -2.238 6.124 -8.087 1.00107.07 C \ ATOM 107 NE ARG 16 -2.485 5.786 -6.656 1.00107.07 N \ ATOM 108 CZ ARG 16 -3.588 5.060 -6.311 1.00107.07 C \ ATOM 109 NH1 ARG 16 -4.458 4.655 -7.280 1.00107.07 N \ ATOM 110 NH2 ARG 16 -3.825 4.749 -5.003 1.00107.07 N \ ATOM 111 C ARG 16 -1.569 8.986 -11.665 1.00107.07 C \ ATOM 112 O ARG 16 -1.496 10.213 -11.681 1.00107.07 O \ ATOM 113 N GLY 17 -1.019 8.225 -12.632 1.00 21.67 N \ ATOM 114 CA GLY 17 -0.360 8.841 -13.749 1.00 21.67 C \ ATOM 115 C GLY 17 0.987 9.310 -13.302 1.00 21.67 C \ ATOM 116 O GLY 17 1.591 8.741 -12.395 1.00 21.67 O \ ATOM 117 N GLU 18 1.488 10.374 -13.961 1.00 63.94 N \ ATOM 118 CA GLU 18 2.767 10.967 -13.686 1.00 63.94 C \ ATOM 119 CB GLU 18 3.128 12.119 -14.648 1.00 63.94 C \ ATOM 120 CG GLU 18 3.393 11.681 -16.091 1.00 63.94 C \ ATOM 121 CD GLU 18 2.064 11.610 -16.827 1.00 63.94 C \ ATOM 122 OE1 GLU 18 1.005 11.745 -16.157 1.00 63.94 O \ ATOM 123 OE2 GLU 18 2.089 11.422 -18.072 1.00 63.94 O \ ATOM 124 C GLU 18 2.728 11.554 -12.311 1.00 63.94 C \ ATOM 125 O GLU 18 3.739 11.602 -11.613 1.00 63.94 O \ ATOM 126 N LYS 19 1.533 12.011 -11.898 1.00112.44 N \ ATOM 127 CA LYS 19 1.301 12.683 -10.651 1.00112.44 C \ ATOM 128 CB LYS 19 -0.184 13.034 -10.444 1.00112.44 C \ ATOM 129 CG LYS 19 -0.453 13.822 -9.161 1.00112.44 C \ ATOM 130 CD LYS 19 0.135 15.235 -9.182 1.00112.44 C \ ATOM 131 CE LYS 19 -0.129 16.033 -7.903 1.00112.44 C \ ATOM 132 NZ LYS 19 0.478 17.380 -8.014 1.00112.44 N \ ATOM 133 C LYS 19 1.692 11.791 -9.517 1.00112.44 C \ ATOM 134 O LYS 19 2.143 12.274 -8.479 1.00112.44 O \ ATOM 135 N CYS 20 1.541 10.465 -9.693 1.00 59.29 N \ ATOM 136 CA CYS 20 1.774 9.505 -8.647 1.00 59.29 C \ ATOM 137 CB CYS 20 1.793 8.056 -9.168 1.00 59.29 C \ ATOM 138 SG CYS 20 2.065 6.828 -7.855 1.00 59.29 S \ ATOM 139 C CYS 20 3.095 9.761 -7.983 1.00 59.29 C \ ATOM 140 O CYS 20 4.110 10.060 -8.611 1.00 59.29 O \ ATOM 141 N PRO 21 3.046 9.707 -6.678 1.00 71.68 N \ ATOM 142 CA PRO 21 4.192 9.908 -5.833 1.00 71.68 C \ ATOM 143 CD PRO 21 1.795 9.787 -5.946 1.00 71.68 C \ ATOM 144 CB PRO 21 3.641 10.087 -4.414 1.00 71.68 C \ ATOM 145 CG PRO 21 2.202 9.542 -4.485 1.00 71.68 C \ ATOM 146 C PRO 21 5.163 8.779 -5.957 1.00 71.68 C \ ATOM 147 O PRO 21 6.333 8.966 -5.627 1.00 71.68 O \ ATOM 148 N HIS 22 4.702 7.596 -6.405 1.00 71.25 N \ ATOM 149 CA HIS 22 5.586 6.474 -6.533 1.00 71.25 C \ ATOM 150 ND1 HIS 22 3.519 3.696 -4.855 1.00 71.25 N \ ATOM 151 CG HIS 22 4.263 4.822 -5.131 1.00 71.25 C \ ATOM 152 CB HIS 22 4.884 5.107 -6.466 1.00 71.25 C \ ATOM 153 NE2 HIS 22 3.570 4.900 -2.986 1.00 71.25 N \ ATOM 154 CD2 HIS 22 4.285 5.545 -3.979 1.00 71.25 C \ ATOM 155 CE1 HIS 22 3.127 3.794 -3.559 1.00 71.25 C \ ATOM 156 C HIS 22 6.243 6.566 -7.870 1.00 71.25 C \ ATOM 157 O HIS 22 5.720 7.185 -8.794 1.00 71.25 O \ ATOM 158 N ILE 23 7.435 5.952 -8.005 1.00115.84 N \ ATOM 159 CA ILE 23 8.126 6.024 -9.258 1.00115.84 C \ ATOM 160 CB ILE 23 9.619 5.985 -9.166 1.00115.84 C \ ATOM 161 CG2 ILE 23 10.070 7.181 -8.308 1.00115.84 C \ ATOM 162 CG1 ILE 23 10.100 4.629 -8.638 1.00115.84 C \ ATOM 163 CD1 ILE 23 11.593 4.422 -8.863 1.00115.84 C \ ATOM 164 C ILE 23 7.705 4.854 -10.078 1.00115.84 C \ ATOM 165 O ILE 23 7.378 3.794 -9.548 1.00115.84 O \ ATOM 166 N HIS 24 7.627 5.041 -11.408 1.00 63.88 N \ ATOM 167 CA HIS 24 7.245 3.942 -12.236 1.00 63.88 C \ ATOM 168 ND1 HIS 24 3.826 5.451 -12.837 1.00 63.88 N \ ATOM 169 CG HIS 24 4.837 4.646 -12.364 1.00 63.88 C \ ATOM 170 CB HIS 24 6.060 4.279 -13.151 1.00 63.88 C \ ATOM 171 NE2 HIS 24 3.244 4.842 -10.781 1.00 63.88 N \ ATOM 172 CD2 HIS 24 4.465 4.282 -11.107 1.00 63.88 C \ ATOM 173 CE1 HIS 24 2.900 5.536 -11.850 1.00 63.88 C \ ATOM 174 C HIS 24 8.414 3.604 -13.101 1.00 63.88 C \ ATOM 175 O HIS 24 8.776 4.358 -14.002 1.00 63.88 O \ ATOM 176 N GLY 25 9.038 2.437 -12.859 1.00 29.16 N \ ATOM 177 CA GLY 25 10.171 2.092 -13.664 1.00 29.16 C \ ATOM 178 C GLY 25 9.801 0.885 -14.455 1.00 29.16 C \ ATOM 179 O GLY 25 9.343 -0.117 -13.910 1.00 29.16 O \ ATOM 180 N ASP 26 10.021 0.949 -15.780 1.00119.00 N \ ATOM 181 CA ASP 26 9.694 -0.142 -16.647 1.00119.00 C \ ATOM 182 CB ASP 26 9.349 0.315 -18.084 1.00119.00 C \ ATOM 183 CG ASP 26 10.517 1.093 -18.690 1.00119.00 C \ ATOM 184 OD1 ASP 26 11.403 1.552 -17.920 1.00119.00 O \ ATOM 185 OD2 ASP 26 10.533 1.243 -19.941 1.00119.00 O \ ATOM 186 C ASP 26 10.845 -1.099 -16.683 1.00119.00 C \ ATOM 187 O ASP 26 11.853 -0.885 -17.353 1.00119.00 O \ ATOM 188 N THR 27 10.711 -2.202 -15.927 1.00193.42 N \ ATOM 189 CA THR 27 11.736 -3.199 -15.890 1.00193.42 C \ ATOM 190 CB THR 27 12.696 -2.977 -14.751 1.00193.42 C \ ATOM 191 OG1 THR 27 13.191 -1.646 -14.805 1.00193.42 O \ ATOM 192 CG2 THR 27 13.894 -3.935 -14.887 1.00193.42 C \ ATOM 193 C THR 27 10.981 -4.476 -15.677 1.00193.42 C \ ATOM 194 O THR 27 9.759 -4.501 -15.799 1.00193.42 O \ ATOM 195 N CYS 28 11.682 -5.584 -15.391 1.00103.80 N \ ATOM 196 CA CYS 28 11.007 -6.819 -15.138 1.00103.80 C \ ATOM 197 CB CYS 28 11.828 -8.061 -15.521 1.00103.80 C \ ATOM 198 SG CYS 28 13.310 -8.245 -14.485 1.00103.80 S \ ATOM 199 C CYS 28 10.771 -6.892 -13.666 1.00103.80 C \ ATOM 200 O CYS 28 11.351 -6.138 -12.885 1.00103.80 O \ ATOM 201 N PRO 29 9.907 -7.786 -13.275 1.00 57.21 N \ ATOM 202 CA PRO 29 9.630 -7.963 -11.878 1.00 57.21 C \ ATOM 203 CD PRO 29 8.773 -8.158 -14.104 1.00 57.21 C \ ATOM 204 CB PRO 29 8.273 -8.670 -11.794 1.00 57.21 C \ ATOM 205 CG PRO 29 7.990 -9.149 -13.231 1.00 57.21 C \ ATOM 206 C PRO 29 10.754 -8.720 -11.262 1.00 57.21 C \ ATOM 207 O PRO 29 11.238 -9.686 -11.910 1.00 57.21 O \ ATOM 208 OXT PRO 29 11.162 -8.357 -10.126 1.00 57.21 O \ TER 209 PRO 29 \ END \ \ ""","model_3") cmd.show_as("cartoon" ,"model_3") cmd.spectrum(expression="count",selection="model_3_aln",byres=2)