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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/09 22:55:16 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 24.4508 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 12.500 \ ATOM 1 N ASP 1 -15.869 1.957 12.369 1.00 19.23 N \ ATOM 2 CA ASP 1 -15.936 0.470 12.344 1.00 19.23 C \ ATOM 3 CB ASP 1 -16.653 0.000 11.072 1.00 19.23 C \ ATOM 4 CG ASP 1 -18.099 0.460 11.158 1.00 19.23 C \ ATOM 5 OD1 ASP 1 -18.672 0.428 12.281 1.00 19.23 O \ ATOM 6 OD2 ASP 1 -18.645 0.875 10.102 1.00 19.23 O \ ATOM 7 C ASP 1 -14.544 -0.053 12.309 1.00 19.23 C \ ATOM 8 O ASP 1 -13.619 0.618 12.763 1.00 19.23 O \ ATOM 9 N ILE 2 -14.338 -1.282 11.799 1.00 39.99 N \ ATOM 10 CA ILE 2 -12.976 -1.710 11.685 1.00 39.99 C \ ATOM 11 CB ILE 2 -12.639 -3.051 12.268 1.00 39.99 C \ ATOM 12 CG2 ILE 2 -11.228 -3.430 11.776 1.00 39.99 C \ ATOM 13 CG1 ILE 2 -12.746 -3.041 13.798 1.00 39.99 C \ ATOM 14 CD1 ILE 2 -12.424 -4.400 14.415 1.00 39.99 C \ ATOM 15 C ILE 2 -12.676 -1.824 10.231 1.00 39.99 C \ ATOM 16 O ILE 2 -13.452 -2.391 9.463 1.00 39.99 O \ ATOM 17 N VAL 3 -11.535 -1.256 9.817 1.00 73.33 N \ ATOM 18 CA VAL 3 -11.177 -1.314 8.438 1.00 73.33 C \ ATOM 19 CB VAL 3 -11.054 0.036 7.787 1.00 73.33 C \ ATOM 20 CG1 VAL 3 -9.853 0.771 8.411 1.00 73.33 C \ ATOM 21 CG2 VAL 3 -10.931 -0.155 6.268 1.00 73.33 C \ ATOM 22 C VAL 3 -9.833 -1.943 8.356 1.00 73.33 C \ ATOM 23 O VAL 3 -9.007 -1.805 9.257 1.00 73.33 O \ ATOM 24 N SER 4 -9.586 -2.671 7.253 1.00 71.49 N \ ATOM 25 CA SER 4 -8.307 -3.276 7.047 1.00 71.49 C \ ATOM 26 CB SER 4 -8.302 -4.339 5.938 1.00 71.49 C \ ATOM 27 OG SER 4 -8.514 -3.726 4.675 1.00 71.49 O \ ATOM 28 C SER 4 -7.394 -2.181 6.608 1.00 71.49 C \ ATOM 29 O SER 4 -7.820 -1.042 6.417 1.00 71.49 O \ ATOM 30 N ASP 5 -6.087 -2.462 6.478 1.00146.81 N \ ATOM 31 CA ASP 5 -5.249 -1.390 6.041 1.00146.81 C \ ATOM 32 CB ASP 5 -3.772 -1.792 5.920 1.00146.81 C \ ATOM 33 CG ASP 5 -3.166 -1.779 7.312 1.00146.81 C \ ATOM 34 OD1 ASP 5 -3.906 -1.432 8.270 1.00146.81 O \ ATOM 35 OD2 ASP 5 -1.953 -2.093 7.435 1.00146.81 O \ ATOM 36 C ASP 5 -5.685 -0.961 4.680 1.00146.81 C \ ATOM 37 O ASP 5 -6.171 0.151 4.491 1.00146.81 O \ ATOM 38 N ALA 6 -5.585 -1.879 3.702 1.00 76.71 N \ ATOM 39 CA ALA 6 -5.949 -1.514 2.368 1.00 76.71 C \ ATOM 40 CB ALA 6 -4.902 -0.628 1.673 1.00 76.71 C \ ATOM 41 C ALA 6 -6.045 -2.772 1.586 1.00 76.71 C \ ATOM 42 O ALA 6 -5.550 -3.821 1.999 1.00 76.71 O \ ATOM 43 N ALA 7 -6.720 -2.700 0.425 1.00 29.69 N \ ATOM 44 CA ALA 7 -6.818 -3.858 -0.405 1.00 29.69 C \ ATOM 45 CB ALA 7 -8.262 -4.298 -0.680 1.00 29.69 C \ ATOM 46 C ALA 7 -6.187 -3.490 -1.705 1.00 29.69 C \ ATOM 47 O ALA 7 -6.243 -2.338 -2.136 1.00 29.69 O \ ATOM 48 N ASP 8 -5.533 -4.463 -2.357 1.00 82.11 N \ ATOM 49 CA ASP 8 -4.865 -4.151 -3.578 1.00 82.11 C \ ATOM 50 CB ASP 8 -3.435 -4.724 -3.591 1.00 82.11 C \ ATOM 51 CG ASP 8 -2.683 -4.168 -4.788 1.00 82.11 C \ ATOM 52 OD1 ASP 8 -3.227 -4.269 -5.919 1.00 82.11 O \ ATOM 53 OD2 ASP 8 -1.553 -3.646 -4.591 1.00 82.11 O \ ATOM 54 C ASP 8 -5.671 -4.757 -4.728 1.00 82.11 C \ ATOM 55 O ASP 8 -6.613 -4.083 -5.227 1.00 82.11 O \ ATOM 56 OXT ASP 8 -5.349 -5.908 -5.123 1.00 82.11 O \ TER 57 ASP 8 \ END \ \ ""","model_2") cmd.show_as("cartoon" ,"model_2") cmd.spectrum(expression="count",selection="model_2_aln",byres=2)