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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/11 14:46:40 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 120.8154 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 10.345 \ ATOM 1 N CYS 1 2.694 11.913 -7.123 1.00 20.04 N \ ATOM 2 CA CYS 1 2.353 13.334 -7.354 1.00 20.04 C \ ATOM 3 CB CYS 1 1.463 13.462 -8.608 1.00 20.04 C \ ATOM 4 SG CYS 1 2.250 12.803 -10.109 1.00 20.04 S \ ATOM 5 C CYS 1 1.586 13.837 -6.174 1.00 20.04 C \ ATOM 6 O CYS 1 2.150 14.166 -5.132 1.00 20.04 O \ ATOM 7 N THR 2 0.252 13.890 -6.322 1.00128.56 N \ ATOM 8 CA THR 2 -0.615 14.362 -5.290 1.00128.56 C \ ATOM 9 CB THR 2 -2.047 14.402 -5.742 1.00128.56 C \ ATOM 10 OG1 THR 2 -2.881 14.920 -4.717 1.00128.56 O \ ATOM 11 CG2 THR 2 -2.488 12.985 -6.131 1.00128.56 C \ ATOM 12 C THR 2 -0.496 13.449 -4.120 1.00128.56 C \ ATOM 13 O THR 2 -0.461 13.888 -2.971 1.00128.56 O \ ATOM 14 N ILE 3 -0.383 12.136 -4.375 1.00152.66 N \ ATOM 15 CA ILE 3 -0.374 11.285 -3.233 1.00152.66 C \ ATOM 16 CB ILE 3 -0.771 9.881 -3.564 1.00152.66 C \ ATOM 17 CG2 ILE 3 -0.697 9.086 -2.258 1.00152.66 C \ ATOM 18 CG1 ILE 3 -2.156 9.837 -4.232 1.00152.66 C \ ATOM 19 CD1 ILE 3 -2.446 8.512 -4.934 1.00152.66 C \ ATOM 20 C ILE 3 1.030 11.233 -2.726 1.00152.66 C \ ATOM 21 O ILE 3 1.739 10.239 -2.892 1.00152.66 O \ ATOM 22 N LEU 4 1.459 12.332 -2.082 1.00150.30 N \ ATOM 23 CA LEU 4 2.759 12.404 -1.491 1.00150.30 C \ ATOM 24 CB LEU 4 3.096 13.796 -0.954 1.00150.30 C \ ATOM 25 CG LEU 4 4.433 13.806 -0.200 1.00150.30 C \ ATOM 26 CD1 LEU 4 5.573 13.319 -1.108 1.00150.30 C \ ATOM 27 CD2 LEU 4 4.708 15.182 0.425 1.00150.30 C \ ATOM 28 C LEU 4 2.794 11.483 -0.325 1.00150.30 C \ ATOM 29 O LEU 4 3.778 10.775 -0.111 1.00150.30 O \ ATOM 30 N ALA 5 1.685 11.463 0.439 1.00 57.21 N \ ATOM 31 CA ALA 5 1.627 10.685 1.635 1.00 57.21 C \ ATOM 32 CB ALA 5 0.238 10.716 2.301 1.00 57.21 C \ ATOM 33 C ALA 5 1.888 9.299 1.207 1.00 57.21 C \ ATOM 34 O ALA 5 2.675 8.581 1.822 1.00 57.21 O \ ATOM 35 N GLN 6 1.271 8.892 0.090 1.00195.69 N \ ATOM 36 CA GLN 6 1.617 7.574 -0.308 1.00195.69 C \ ATOM 37 CB GLN 6 0.535 6.738 -1.013 1.00195.69 C \ ATOM 38 CG GLN 6 -0.433 6.089 -0.025 1.00195.69 C \ ATOM 39 CD GLN 6 -1.256 5.042 -0.771 1.00195.69 C \ ATOM 40 OE1 GLN 6 -1.581 5.212 -1.945 1.00195.69 O \ ATOM 41 NE2 GLN 6 -1.593 3.922 -0.073 1.00195.69 N \ ATOM 42 C GLN 6 2.826 7.674 -1.161 1.00195.69 C \ ATOM 43 O GLN 6 3.885 8.080 -0.686 1.00195.69 O \ ATOM 44 N GLY 7 2.716 7.293 -2.443 1.00169.29 N \ ATOM 45 CA GLY 7 3.907 7.322 -3.226 1.00169.29 C \ ATOM 46 C GLY 7 4.816 6.319 -2.600 1.00169.29 C \ ATOM 47 O GLY 7 4.629 5.113 -2.765 1.00169.29 O \ ATOM 48 N ALA 8 5.844 6.789 -1.872 1.00 58.43 N \ ATOM 49 CA ALA 8 6.723 5.841 -1.255 1.00 58.43 C \ ATOM 50 CB ALA 8 7.899 6.491 -0.504 1.00 58.43 C \ ATOM 51 C ALA 8 5.927 5.048 -0.271 1.00 58.43 C \ ATOM 52 O ALA 8 6.027 3.823 -0.222 1.00 58.43 O \ ATOM 53 N VAL 9 5.079 5.730 0.517 1.00 41.10 N \ ATOM 54 CA VAL 9 4.296 5.022 1.481 1.00 41.10 C \ ATOM 55 CB VAL 9 3.517 5.918 2.396 1.00 41.10 C \ ATOM 56 CG1 VAL 9 2.695 5.037 3.351 1.00 41.10 C \ ATOM 57 CG2 VAL 9 4.511 6.845 3.120 1.00 41.10 C \ ATOM 58 C VAL 9 3.360 4.119 0.738 1.00 41.10 C \ ATOM 59 O VAL 9 3.038 3.033 1.207 1.00 41.10 O \ ATOM 60 N GLY 10 2.884 4.557 -0.442 1.00 33.43 N \ ATOM 61 CA GLY 10 2.000 3.736 -1.218 1.00 33.43 C \ ATOM 62 C GLY 10 2.730 2.497 -1.637 1.00 33.43 C \ ATOM 63 O GLY 10 2.165 1.409 -1.666 1.00 33.43 O \ ATOM 64 N VAL 11 4.009 2.608 -2.024 1.00 36.02 N \ ATOM 65 CA VAL 11 4.716 1.430 -2.449 1.00 36.02 C \ ATOM 66 CB VAL 11 6.086 1.752 -2.963 1.00 36.02 C \ ATOM 67 CG1 VAL 11 6.835 0.435 -3.211 1.00 36.02 C \ ATOM 68 CG2 VAL 11 5.939 2.624 -4.223 1.00 36.02 C \ ATOM 69 C VAL 11 4.866 0.483 -1.295 1.00 36.02 C \ ATOM 70 O VAL 11 4.626 -0.719 -1.420 1.00 36.02 O \ ATOM 71 N ALA 12 5.277 1.012 -0.131 1.00 30.13 N \ ATOM 72 CA ALA 12 5.469 0.169 1.009 1.00 30.13 C \ ATOM 73 CB ALA 12 5.999 0.939 2.232 1.00 30.13 C \ ATOM 74 C ALA 12 4.150 -0.420 1.390 1.00 30.13 C \ ATOM 75 O ALA 12 4.046 -1.618 1.642 1.00 30.13 O \ ATOM 76 N VAL 13 3.104 0.423 1.412 1.00 93.23 N \ ATOM 77 CA VAL 13 1.790 0.025 1.821 1.00 93.23 C \ ATOM 78 CB VAL 13 0.823 1.177 1.912 1.00 93.23 C \ ATOM 79 CG1 VAL 13 0.547 1.723 0.507 1.00 93.23 C \ ATOM 80 CG2 VAL 13 -0.447 0.714 2.641 1.00 93.23 C \ ATOM 81 C VAL 13 1.237 -0.976 0.860 1.00 93.23 C \ ATOM 82 O VAL 13 0.574 -1.920 1.276 1.00 93.23 O \ ATOM 83 N THR 14 1.484 -0.796 -0.454 1.00106.60 N \ ATOM 84 CA THR 14 0.905 -1.688 -1.422 1.00106.60 C \ ATOM 85 CB THR 14 1.142 -1.308 -2.862 1.00106.60 C \ ATOM 86 OG1 THR 14 2.532 -1.194 -3.125 1.00106.60 O \ ATOM 87 CG2 THR 14 0.388 -0.004 -3.185 1.00106.60 C \ ATOM 88 C THR 14 1.424 -3.073 -1.223 1.00106.60 C \ ATOM 89 O THR 14 0.655 -4.033 -1.229 1.00106.60 O \ ATOM 90 N VAL 15 2.741 -3.231 -1.022 1.00 26.68 N \ ATOM 91 CA VAL 15 3.248 -4.558 -0.851 1.00 26.68 C \ ATOM 92 CB VAL 15 4.741 -4.589 -0.700 1.00 26.68 C \ ATOM 93 CG1 VAL 15 5.173 -6.019 -0.338 1.00 26.68 C \ ATOM 94 CG2 VAL 15 5.361 -4.081 -2.014 1.00 26.68 C \ ATOM 95 C VAL 15 2.619 -5.118 0.383 1.00 26.68 C \ ATOM 96 O VAL 15 2.173 -6.264 0.411 1.00 26.68 O \ ATOM 97 N ALA 16 2.532 -4.304 1.445 1.00 29.47 N \ ATOM 98 CA ALA 16 1.980 -4.783 2.677 1.00 29.47 C \ ATOM 99 CB ALA 16 1.975 -3.698 3.769 1.00 29.47 C \ ATOM 100 C ALA 16 0.557 -5.199 2.440 1.00 29.47 C \ ATOM 101 O ALA 16 0.133 -6.268 2.880 1.00 29.47 O \ ATOM 102 N VAL 17 -0.212 -4.380 1.703 1.00 30.78 N \ ATOM 103 CA VAL 17 -1.599 -4.653 1.468 1.00 30.78 C \ ATOM 104 CB VAL 17 -2.250 -3.595 0.622 1.00 30.78 C \ ATOM 105 CG1 VAL 17 -3.688 -4.034 0.304 1.00 30.78 C \ ATOM 106 CG2 VAL 17 -2.160 -2.252 1.364 1.00 30.78 C \ ATOM 107 C VAL 17 -1.730 -5.942 0.730 1.00 30.78 C \ ATOM 108 O VAL 17 -2.538 -6.793 1.095 1.00 30.78 O \ ATOM 109 N VAL 18 -0.932 -6.116 -0.336 1.00 95.44 N \ ATOM 110 CA VAL 18 -1.070 -7.297 -1.127 1.00 95.44 C \ ATOM 111 CB VAL 18 -0.264 -7.246 -2.391 1.00 95.44 C \ ATOM 112 CG1 VAL 18 -0.932 -6.233 -3.334 1.00 95.44 C \ ATOM 113 CG2 VAL 18 1.184 -6.865 -2.060 1.00 95.44 C \ ATOM 114 C VAL 18 -0.718 -8.530 -0.352 1.00 95.44 C \ ATOM 115 O VAL 18 -1.456 -9.512 -0.392 1.00 95.44 O \ ATOM 116 N ILE 19 0.404 -8.538 0.391 1.00124.10 N \ ATOM 117 CA ILE 19 0.725 -9.776 1.045 1.00124.10 C \ ATOM 118 CB ILE 19 2.082 -9.829 1.692 1.00124.10 C \ ATOM 119 CG2 ILE 19 2.134 -8.793 2.825 1.00124.10 C \ ATOM 120 CG1 ILE 19 2.368 -11.269 2.164 1.00124.10 C \ ATOM 121 CD1 ILE 19 2.453 -12.289 1.030 1.00124.10 C \ ATOM 122 C ILE 19 -0.300 -10.111 2.085 1.00124.10 C \ ATOM 123 O ILE 19 -0.735 -11.258 2.178 1.00124.10 O \ ATOM 124 N LEU 20 -0.734 -9.117 2.881 1.00 41.61 N \ ATOM 125 CA LEU 20 -1.633 -9.378 3.971 1.00 41.61 C \ ATOM 126 CB LEU 20 -1.958 -8.085 4.754 1.00 41.61 C \ ATOM 127 CG LEU 20 -0.728 -7.467 5.459 1.00 41.61 C \ ATOM 128 CD1 LEU 20 -1.074 -6.146 6.166 1.00 41.61 C \ ATOM 129 CD2 LEU 20 -0.069 -8.476 6.415 1.00 41.61 C \ ATOM 130 C LEU 20 -2.905 -9.952 3.426 1.00 41.61 C \ ATOM 131 O LEU 20 -3.409 -10.963 3.919 1.00 41.61 O \ ATOM 132 N SER 21 -3.437 -9.343 2.355 1.00 29.71 N \ ATOM 133 CA SER 21 -4.679 -9.773 1.789 1.00 29.71 C \ ATOM 134 CB SER 21 -5.134 -8.868 0.631 1.00 29.71 C \ ATOM 135 OG SER 21 -5.317 -7.535 1.086 1.00 29.71 O \ ATOM 136 C SER 21 -4.509 -11.154 1.235 1.00 29.71 C \ ATOM 137 O SER 21 -5.442 -11.956 1.255 1.00 29.71 O \ ATOM 138 N TYR 22 -3.300 -11.481 0.743 1.00 84.40 N \ ATOM 139 CA TYR 22 -3.104 -12.751 0.107 1.00 84.40 C \ ATOM 140 CB TYR 22 -1.650 -12.985 -0.337 1.00 84.40 C \ ATOM 141 CG TYR 22 -1.656 -14.126 -1.301 1.00 84.40 C \ ATOM 142 CD1 TYR 22 -1.671 -15.436 -0.878 1.00 84.40 C \ ATOM 143 CD2 TYR 22 -1.670 -13.871 -2.655 1.00 84.40 C \ ATOM 144 CE1 TYR 22 -1.684 -16.465 -1.794 1.00 84.40 C \ ATOM 145 CE2 TYR 22 -1.681 -14.894 -3.574 1.00 84.40 C \ ATOM 146 CZ TYR 22 -1.689 -16.200 -3.143 1.00 84.40 C \ ATOM 147 OH TYR 22 -1.702 -17.262 -4.073 1.00 84.40 O \ ATOM 148 C TYR 22 -3.385 -13.811 1.118 1.00 84.40 C \ ATOM 149 O TYR 22 -4.094 -14.778 0.842 1.00 84.40 O \ ATOM 150 N PHE 23 -2.828 -13.646 2.328 1.00 94.41 N \ ATOM 151 CA PHE 23 -2.999 -14.628 3.353 1.00 94.41 C \ ATOM 152 CB PHE 23 -2.078 -14.405 4.564 1.00 94.41 C \ ATOM 153 CG PHE 23 -0.771 -14.993 4.153 1.00 94.41 C \ ATOM 154 CD1 PHE 23 -0.056 -14.429 3.123 1.00 94.41 C \ ATOM 155 CD2 PHE 23 -0.259 -16.096 4.801 1.00 94.41 C \ ATOM 156 CE1 PHE 23 1.149 -14.965 2.733 1.00 94.41 C \ ATOM 157 CE2 PHE 23 0.946 -16.636 4.417 1.00 94.41 C \ ATOM 158 CZ PHE 23 1.649 -16.070 3.381 1.00 94.41 C \ ATOM 159 C PHE 23 -4.425 -14.680 3.765 1.00 94.41 C \ ATOM 160 O PHE 23 -4.945 -15.753 4.070 1.00 94.41 O \ ATOM 161 N TYR 24 -5.098 -13.520 3.805 1.00 94.98 N \ ATOM 162 CA TYR 24 -6.464 -13.506 4.221 1.00 94.98 C \ ATOM 163 CB TYR 24 -7.048 -12.092 4.345 1.00 94.98 C \ ATOM 164 CG TYR 24 -8.305 -12.258 5.126 1.00 94.98 C \ ATOM 165 CD1 TYR 24 -9.446 -12.745 4.536 1.00 94.98 C \ ATOM 166 CD2 TYR 24 -8.339 -11.930 6.461 1.00 94.98 C \ ATOM 167 CE1 TYR 24 -10.602 -12.901 5.262 1.00 94.98 C \ ATOM 168 CE2 TYR 24 -9.493 -12.086 7.196 1.00 94.98 C \ ATOM 169 CZ TYR 24 -10.627 -12.577 6.595 1.00 94.98 C \ ATOM 170 OH TYR 24 -11.817 -12.744 7.334 1.00 94.98 O \ ATOM 171 C TYR 24 -7.291 -14.250 3.210 1.00 94.98 C \ ATOM 172 O TYR 24 -8.199 -14.994 3.575 1.00 94.98 O \ ATOM 173 N GLU 25 -6.988 -14.079 1.907 1.00 76.47 N \ ATOM 174 CA GLU 25 -7.785 -14.663 0.861 1.00 76.47 C \ ATOM 175 CB GLU 25 -7.196 -14.425 -0.540 1.00 76.47 C \ ATOM 176 CG GLU 25 -8.029 -15.041 -1.666 1.00 76.47 C \ ATOM 177 CD GLU 25 -7.320 -14.777 -2.989 1.00 76.47 C \ ATOM 178 OE1 GLU 25 -6.083 -15.010 -3.063 1.00 76.47 O \ ATOM 179 OE2 GLU 25 -8.014 -14.341 -3.945 1.00 76.47 O \ ATOM 180 C GLU 25 -7.830 -16.139 1.058 1.00 76.47 C \ ATOM 181 O GLU 25 -8.885 -16.759 0.943 1.00 76.47 O \ ATOM 182 N VAL 26 -6.675 -16.741 1.379 1.00133.91 N \ ATOM 183 CA VAL 26 -6.618 -18.145 1.627 1.00133.91 C \ ATOM 184 CB VAL 26 -5.377 -18.801 1.084 1.00133.91 C \ ATOM 185 CG1 VAL 26 -5.361 -18.650 -0.449 1.00133.91 C \ ATOM 186 CG2 VAL 26 -4.156 -18.191 1.787 1.00133.91 C \ ATOM 187 C VAL 26 -6.581 -18.234 3.111 1.00133.91 C \ ATOM 188 O VAL 26 -6.946 -17.281 3.798 1.00133.91 O \ ATOM 189 N ARG 27 -6.219 -19.398 3.665 1.00326.80 N \ ATOM 190 CA ARG 27 -6.130 -19.437 5.090 1.00326.80 C \ ATOM 191 CB ARG 27 -6.519 -20.787 5.718 1.00326.80 C \ ATOM 192 CG ARG 27 -8.028 -21.003 5.840 1.00326.80 C \ ATOM 193 CD ARG 27 -8.759 -21.212 4.512 1.00326.80 C \ ATOM 194 NE ARG 27 -8.660 -22.659 4.175 1.00326.80 N \ ATOM 195 CZ ARG 27 -7.701 -23.099 3.309 1.00326.80 C \ ATOM 196 NH1 ARG 27 -6.836 -22.215 2.732 1.00326.80 N \ ATOM 197 NH2 ARG 27 -7.602 -24.430 3.024 1.00326.80 N \ ATOM 198 C ARG 27 -4.703 -19.207 5.431 1.00326.80 C \ ATOM 199 O ARG 27 -3.805 -19.812 4.850 1.00326.80 O \ ATOM 200 N LYS 28 -4.448 -18.285 6.374 1.00168.23 N \ ATOM 201 CA LYS 28 -3.090 -18.118 6.769 1.00168.23 C \ ATOM 202 CB LYS 28 -2.650 -16.667 7.042 1.00168.23 C \ ATOM 203 CG LYS 28 -3.327 -16.027 8.255 1.00168.23 C \ ATOM 204 CD LYS 28 -4.837 -15.865 8.079 1.00168.23 C \ ATOM 205 CE LYS 28 -5.212 -14.887 6.967 1.00168.23 C \ ATOM 206 NZ LYS 28 -6.684 -14.792 6.859 1.00168.23 N \ ATOM 207 C LYS 28 -2.958 -18.867 8.043 1.00168.23 C \ ATOM 208 O LYS 28 -3.883 -18.913 8.852 1.00168.23 O \ ATOM 209 N ARG 29 -1.805 -19.521 8.225 1.00133.82 N \ ATOM 210 CA ARG 29 -1.577 -20.243 9.432 1.00133.82 C \ ATOM 211 CB ARG 29 -2.059 -21.703 9.376 1.00133.82 C \ ATOM 212 CG ARG 29 -2.170 -22.362 10.757 1.00133.82 C \ ATOM 213 CD ARG 29 -3.307 -21.774 11.597 1.00133.82 C \ ATOM 214 NE ARG 29 -3.485 -22.588 12.838 1.00133.82 N \ ATOM 215 CZ ARG 29 -2.759 -22.332 13.968 1.00133.82 C \ ATOM 216 NH1 ARG 29 -1.710 -21.461 13.935 1.00133.82 N \ ATOM 217 NH2 ARG 29 -3.101 -22.945 15.142 1.00133.82 N \ ATOM 218 C ARG 29 -0.064 -20.270 9.551 1.00133.82 C \ ATOM 219 O ARG 29 0.597 -19.567 8.737 1.00133.82 O \ ATOM 220 OXT ARG 29 0.454 -20.992 10.441 1.00133.82 O \ TER 221 ARG 29 \ END \ \ ""","model_2") cmd.show_as("cartoon" ,"model_2") cmd.spectrum(expression="count",selection="model_2_aln",byres=2)