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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/10 00:39:27 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 127.6994 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 14.286 \ ATOM 1 N GLN 1 -4.868 -6.968 -8.815 1.00 35.95 N \ ATOM 2 CA GLN 1 -4.270 -6.940 -10.171 1.00 35.95 C \ ATOM 3 CB GLN 1 -5.229 -7.588 -11.187 1.00 35.95 C \ ATOM 4 CG GLN 1 -4.670 -7.748 -12.608 1.00 35.95 C \ ATOM 5 CD GLN 1 -5.845 -8.123 -13.501 1.00 35.95 C \ ATOM 6 OE1 GLN 1 -5.700 -8.520 -14.658 1.00 35.95 O \ ATOM 7 NE2 GLN 1 -7.070 -7.988 -12.932 1.00 35.95 N \ ATOM 8 C GLN 1 -4.018 -5.524 -10.591 1.00 35.95 C \ ATOM 9 O GLN 1 -3.231 -4.810 -9.967 1.00 35.95 O \ ATOM 10 N ARG 2 -4.686 -5.088 -11.675 0.71 89.41 N \ ATOM 11 CA ARG 2 -4.511 -3.776 -12.231 0.71 89.41 C \ ATOM 12 CB ARG 2 -5.298 -3.565 -13.537 0.71 89.41 C \ ATOM 13 CG ARG 2 -6.817 -3.693 -13.377 0.71 89.41 C \ ATOM 14 CD ARG 2 -7.594 -3.496 -14.684 0.71 89.41 C \ ATOM 15 NE ARG 2 -9.045 -3.636 -14.376 1.00 89.41 N \ ATOM 16 CZ ARG 2 -9.931 -3.965 -15.359 1.00 89.41 C \ ATOM 17 NH1 ARG 2 -9.489 -4.237 -16.623 1.00 89.41 N \ ATOM 18 NH2 ARG 2 -11.262 -4.035 -15.062 1.00 89.41 N \ ATOM 19 C ARG 2 -4.988 -2.721 -11.286 0.71 89.41 C \ ATOM 20 O ARG 2 -4.299 -1.727 -11.068 0.71 89.41 O \ ATOM 21 N LEU 3 -6.179 -2.910 -10.690 1.00 90.83 N \ ATOM 22 CA LEU 3 -6.734 -1.861 -9.885 1.00 90.83 C \ ATOM 23 CB LEU 3 -8.123 -2.231 -9.327 1.00 90.83 C \ ATOM 24 CG LEU 3 -8.876 -1.094 -8.599 1.00 90.83 C \ ATOM 25 CD1 LEU 3 -8.201 -0.671 -7.283 1.00 90.83 C \ ATOM 26 CD2 LEU 3 -9.128 0.088 -9.549 1.00 90.83 C \ ATOM 27 C LEU 3 -5.821 -1.610 -8.732 1.00 90.83 C \ ATOM 28 O LEU 3 -5.435 -0.471 -8.473 1.00 90.83 O \ ATOM 29 N LYS 4 -5.438 -2.684 -8.024 1.00 72.96 N \ ATOM 30 CA LYS 4 -4.589 -2.563 -6.878 1.00 72.96 C \ ATOM 31 CB LYS 4 -4.422 -3.888 -6.125 1.00 72.96 C \ ATOM 32 CG LYS 4 -5.677 -4.265 -5.345 1.00 72.96 C \ ATOM 33 CD LYS 4 -5.724 -5.746 -4.982 1.00 72.96 C \ ATOM 34 CE LYS 4 -4.344 -6.392 -4.863 1.00 72.96 C \ ATOM 35 NZ LYS 4 -4.499 -7.834 -4.573 1.00 72.96 N \ ATOM 36 C LYS 4 -3.252 -2.095 -7.332 1.00 72.96 C \ ATOM 37 O LYS 4 -2.579 -1.333 -6.640 1.00 72.96 O \ ATOM 38 N ASP 5 -2.839 -2.540 -8.526 1.00 79.46 N \ ATOM 39 CA ASP 5 -1.548 -2.190 -9.026 1.00 79.46 C \ ATOM 40 CB ASP 5 -1.317 -2.781 -10.428 1.00 79.46 C \ ATOM 41 CG ASP 5 0.063 -2.392 -10.941 1.00 79.46 C \ ATOM 42 OD1 ASP 5 0.286 -1.178 -11.187 1.00 79.46 O \ ATOM 43 OD2 ASP 5 0.905 -3.312 -11.120 1.00 79.46 O \ ATOM 44 C ASP 5 -1.454 -0.701 -9.122 1.00 79.46 C \ ATOM 45 O ASP 5 -0.473 -0.111 -8.672 1.00 79.46 O \ ATOM 46 N GLU 6 -2.486 -0.050 -9.693 0.60104.75 N \ ATOM 47 CA GLU 6 -2.447 1.372 -9.888 0.60104.75 C \ ATOM 48 CB GLU 6 -3.709 1.915 -10.580 0.60104.75 C \ ATOM 49 CG GLU 6 -3.742 3.444 -10.696 0.60104.75 C \ ATOM 50 CD GLU 6 -2.933 3.866 -11.911 0.60104.75 C \ ATOM 51 OE1 GLU 6 -2.519 2.971 -12.692 1.00104.75 O \ ATOM 52 OE2 GLU 6 -2.724 5.099 -12.072 1.00104.75 O \ ATOM 53 C GLU 6 -2.390 2.069 -8.574 0.60104.75 C \ ATOM 54 O GLU 6 -1.548 2.939 -8.357 0.60104.75 O \ ATOM 55 N ARG 7 -3.295 1.694 -7.657 1.00140.58 N \ ATOM 56 CA ARG 7 -3.357 2.378 -6.405 1.00140.58 C \ ATOM 57 CB ARG 7 -4.567 1.950 -5.557 1.00140.58 C \ ATOM 58 CG ARG 7 -4.595 0.463 -5.203 1.00140.58 C \ ATOM 59 CD ARG 7 -5.957 0.008 -4.679 1.00140.58 C \ ATOM 60 NE ARG 7 -6.327 0.915 -3.558 1.00140.58 N \ ATOM 61 CZ ARG 7 -7.625 0.966 -3.137 1.00140.58 C \ ATOM 62 NH1 ARG 7 -8.556 0.179 -3.749 1.00140.58 N \ ATOM 63 NH2 ARG 7 -7.991 1.804 -2.126 1.00140.58 N \ ATOM 64 C ARG 7 -2.108 2.131 -5.625 1.00140.58 C \ ATOM 65 O ARG 7 -1.536 3.057 -5.056 1.00140.58 O \ ATOM 66 N ASP 8 -1.629 0.875 -5.594 1.00105.29 N \ ATOM 67 CA ASP 8 -0.488 0.604 -4.776 1.00105.29 C \ ATOM 68 CB ASP 8 -0.195 -0.901 -4.546 1.00105.29 C \ ATOM 69 CG ASP 8 0.151 -1.651 -5.826 1.00105.29 C \ ATOM 70 OD1 ASP 8 0.849 -1.086 -6.707 1.00105.29 O \ ATOM 71 OD2 ASP 8 -0.281 -2.829 -5.934 1.00105.29 O \ ATOM 72 C ASP 8 0.711 1.318 -5.312 1.00105.29 C \ ATOM 73 O ASP 8 1.588 1.712 -4.545 1.00105.29 O \ ATOM 74 N ALA 9 0.794 1.517 -6.641 1.00 24.53 N \ ATOM 75 CA ALA 9 1.940 2.187 -7.177 1.00 24.53 C \ ATOM 76 CB ALA 9 1.884 2.348 -8.708 1.00 24.53 C \ ATOM 77 C ALA 9 1.946 3.559 -6.599 1.00 24.53 C \ ATOM 78 O ALA 9 2.987 4.085 -6.205 1.00 24.53 O \ ATOM 79 N ALA 10 0.757 4.174 -6.527 0.53 29.76 N \ ATOM 80 CA ALA 10 0.681 5.509 -6.028 0.53 29.76 C \ ATOM 81 CB ALA 10 -0.745 6.081 -6.098 0.53 29.76 C \ ATOM 82 C ALA 10 1.117 5.537 -4.595 0.53 29.76 C \ ATOM 83 O ALA 10 1.905 6.393 -4.194 0.53 29.76 O \ ATOM 84 N VAL 11 0.637 4.578 -3.786 1.00 33.45 N \ ATOM 85 CA VAL 11 0.926 4.616 -2.384 1.00 33.45 C \ ATOM 86 CB VAL 11 0.231 3.518 -1.641 1.00 33.45 C \ ATOM 87 CG1 VAL 11 0.676 3.574 -0.171 1.00 33.45 C \ ATOM 88 CG2 VAL 11 -1.285 3.685 -1.840 1.00 33.45 C \ ATOM 89 C VAL 11 2.392 4.474 -2.123 1.00 33.45 C \ ATOM 90 O VAL 11 2.988 5.289 -1.422 1.00 33.45 O \ ATOM 91 N ARG 12 3.023 3.427 -2.679 0.51 83.66 N \ ATOM 92 CA ARG 12 4.411 3.236 -2.388 0.51 83.66 C \ ATOM 93 CB ARG 12 4.956 1.859 -2.807 0.51 83.66 C \ ATOM 94 CG ARG 12 4.820 0.821 -1.689 1.00 83.66 C \ ATOM 95 CD ARG 12 3.392 0.363 -1.397 1.00 83.66 C \ ATOM 96 NE ARG 12 3.413 -0.290 -0.055 1.00 83.66 N \ ATOM 97 CZ ARG 12 3.807 -1.590 0.089 1.00 83.66 C \ ATOM 98 NH1 ARG 12 4.163 -2.335 -0.997 1.00 83.66 N \ ATOM 99 NH2 ARG 12 3.850 -2.155 1.332 1.00 83.66 N \ ATOM 100 C ARG 12 5.230 4.314 -3.008 0.51 83.66 C \ ATOM 101 O ARG 12 6.189 4.806 -2.415 0.51 83.66 O \ ATOM 102 N GLN 13 4.857 4.721 -4.226 1.00 70.04 N \ ATOM 103 CA GLN 13 5.618 5.705 -4.927 1.00 70.04 C \ ATOM 104 CB GLN 13 5.056 5.952 -6.331 1.00 70.04 C \ ATOM 105 CG GLN 13 5.851 6.957 -7.159 1.00 70.04 C \ ATOM 106 CD GLN 13 5.138 7.091 -8.492 1.00 70.04 C \ ATOM 107 OE1 GLN 13 4.950 6.115 -9.221 1.00 70.04 O \ ATOM 108 NE2 GLN 13 4.716 8.338 -8.827 1.00 70.04 N \ ATOM 109 C GLN 13 5.568 6.992 -4.169 1.00 70.04 C \ ATOM 110 O GLN 13 6.579 7.679 -4.033 1.00 70.04 O \ ATOM 111 N THR 14 4.386 7.343 -3.628 0.47 94.81 N \ ATOM 112 CA THR 14 4.239 8.607 -2.971 0.47 94.81 C \ ATOM 113 CB THR 14 2.826 8.890 -2.550 0.47 94.81 C \ ATOM 114 OG1 THR 14 2.701 10.248 -2.157 1.00 94.81 O \ ATOM 115 CG2 THR 14 2.445 7.975 -1.378 1.00 94.81 C \ ATOM 116 C THR 14 5.119 8.643 -1.767 0.47 94.81 C \ ATOM 117 O THR 14 5.762 9.652 -1.483 0.47 94.81 O \ ATOM 118 N GLN 15 5.197 7.519 -1.034 1.00 80.08 N \ ATOM 119 CA GLN 15 5.948 7.496 0.178 1.00 80.08 C \ ATOM 120 CB GLN 15 5.908 6.118 0.858 1.00 80.08 C \ ATOM 121 CG GLN 15 4.488 5.580 1.069 1.00 80.08 C \ ATOM 122 CD GLN 15 3.706 6.522 1.976 1.00 80.08 C \ ATOM 123 OE1 GLN 15 3.853 7.743 1.929 1.00 80.08 O \ ATOM 124 NE2 GLN 15 2.826 5.936 2.832 1.00 80.08 N \ ATOM 125 C GLN 15 7.377 7.777 -0.151 1.00 80.08 C \ ATOM 126 O GLN 15 8.034 8.574 0.517 1.00 80.08 O \ ATOM 127 N LEU 16 7.896 7.135 -1.213 1.00125.91 N \ ATOM 128 CA LEU 16 9.265 7.360 -1.567 1.00125.91 C \ ATOM 129 CB LEU 16 9.817 6.395 -2.637 1.00125.91 C \ ATOM 130 CG LEU 16 9.096 6.394 -3.997 1.00125.91 C \ ATOM 131 CD1 LEU 16 9.350 7.682 -4.797 1.00125.91 C \ ATOM 132 CD2 LEU 16 9.438 5.123 -4.790 1.00125.91 C \ ATOM 133 C LEU 16 9.403 8.774 -2.023 1.00125.91 C \ ATOM 134 O LEU 16 10.440 9.400 -1.816 1.00125.91 O \ ATOM 135 N LEU 17 8.349 9.313 -2.662 1.00 39.40 N \ ATOM 136 CA LEU 17 8.380 10.661 -3.156 1.00 39.40 C \ ATOM 137 CB LEU 17 7.080 11.092 -3.858 1.00 39.40 C \ ATOM 138 CG LEU 17 6.761 10.321 -5.155 1.00 39.40 C \ ATOM 139 CD1 LEU 17 5.472 10.848 -5.806 1.00 39.40 C \ ATOM 140 CD2 LEU 17 7.951 10.338 -6.129 1.00 39.40 C \ ATOM 141 C LEU 17 8.548 11.572 -1.987 1.00 39.40 C \ ATOM 142 O LEU 17 9.260 12.570 -2.069 1.00 39.40 O \ ATOM 143 N GLN 18 7.896 11.243 -0.858 1.00 43.64 N \ ATOM 144 CA GLN 18 7.980 12.092 0.290 1.00 43.64 C \ ATOM 145 CB GLN 18 7.318 11.478 1.530 1.00 43.64 C \ ATOM 146 CG GLN 18 5.813 11.260 1.407 1.00 43.64 C \ ATOM 147 CD GLN 18 5.359 10.623 2.709 1.00 43.64 C \ ATOM 148 OE1 GLN 18 4.232 10.145 2.822 1.00 43.64 O \ ATOM 149 NE2 GLN 18 6.265 10.608 3.725 1.00 43.64 N \ ATOM 150 C GLN 18 9.421 12.193 0.646 1.00 43.64 C \ ATOM 151 O GLN 18 9.935 13.276 0.918 1.00 43.64 O \ ATOM 152 N GLN 19 10.113 11.045 0.628 0.70109.13 N \ ATOM 153 CA GLN 19 11.483 11.026 1.027 0.70109.13 C \ ATOM 154 CB GLN 19 12.056 9.601 1.074 0.70109.13 C \ ATOM 155 CG GLN 19 13.289 9.491 1.968 0.70109.13 C \ ATOM 156 CD GLN 19 12.794 9.594 3.404 1.00109.13 C \ ATOM 157 OE1 GLN 19 12.293 10.630 3.842 1.00109.13 O \ ATOM 158 NE2 GLN 19 12.936 8.478 4.166 1.00109.13 N \ ATOM 159 C GLN 19 12.272 11.848 0.048 0.70109.13 C \ ATOM 160 O GLN 19 13.172 12.594 0.428 0.70109.13 O \ ATOM 161 N ASP 20 11.935 11.748 -1.249 1.00 44.39 N \ ATOM 162 CA ASP 20 12.658 12.486 -2.246 1.00 44.39 C \ ATOM 163 CB ASP 20 12.141 12.241 -3.668 1.00 44.39 C \ ATOM 164 CG ASP 20 12.683 10.897 -4.112 1.00 44.39 C \ ATOM 165 OD1 ASP 20 13.935 10.749 -4.139 1.00 44.39 O \ ATOM 166 OD2 ASP 20 11.859 9.993 -4.413 1.00 44.39 O \ ATOM 167 C ASP 20 12.491 13.939 -1.967 1.00 44.39 C \ ATOM 168 O ASP 20 13.423 14.725 -2.136 1.00 44.39 O \ ATOM 169 N LEU 21 11.291 14.322 -1.509 1.00100.63 N \ ATOM 170 CA LEU 21 11.009 15.699 -1.249 1.00100.63 C \ ATOM 171 CB LEU 21 9.568 15.910 -0.739 1.00100.63 C \ ATOM 172 CG LEU 21 9.223 17.352 -0.322 1.00100.63 C \ ATOM 173 CD1 LEU 21 9.817 17.717 1.049 1.00100.63 C \ ATOM 174 CD2 LEU 21 9.627 18.347 -1.419 1.00100.63 C \ ATOM 175 C LEU 21 11.974 16.182 -0.218 1.00100.63 C \ ATOM 176 O LEU 21 12.488 17.295 -0.320 1.00100.63 O \ ATOM 177 N ASP 22 12.258 15.356 0.802 1.00 37.19 N \ ATOM 178 CA ASP 22 13.152 15.803 1.826 1.00 37.19 C \ ATOM 179 CB ASP 22 13.373 14.758 2.926 1.00 37.19 C \ ATOM 180 CG ASP 22 12.064 14.620 3.680 1.00 37.19 C \ ATOM 181 OD1 ASP 22 11.108 15.369 3.345 1.00 37.19 O \ ATOM 182 OD2 ASP 22 12.003 13.761 4.601 1.00 37.19 O \ ATOM 183 C ASP 22 14.482 16.072 1.199 1.00 37.19 C \ ATOM 184 O ASP 22 15.120 17.085 1.481 1.00 37.19 O \ ATOM 185 N MET 23 14.912 15.173 0.297 0.59150.76 N \ ATOM 186 CA MET 23 16.199 15.275 -0.327 0.59150.76 C \ ATOM 187 CB MET 23 16.424 14.138 -1.337 0.59150.76 C \ ATOM 188 CG MET 23 17.872 14.003 -1.793 0.59150.76 C \ ATOM 189 SD MET 23 18.971 13.313 -0.524 1.00150.76 S \ ATOM 190 CE MET 23 18.332 11.624 -0.710 1.00150.76 C \ ATOM 191 C MET 23 16.236 16.547 -1.094 0.59150.76 C \ ATOM 192 O MET 23 17.195 17.316 -1.029 0.59150.76 O \ ATOM 193 N LEU 24 15.125 16.825 -1.786 1.00169.48 N \ ATOM 194 CA LEU 24 15.005 17.977 -2.614 1.00169.48 C \ ATOM 195 CB LEU 24 13.585 18.079 -3.207 1.00169.48 C \ ATOM 196 CG LEU 24 13.454 19.040 -4.401 1.00169.48 C \ ATOM 197 CD1 LEU 24 13.838 20.479 -4.025 1.00169.48 C \ ATOM 198 CD2 LEU 24 14.220 18.500 -5.620 1.00169.48 C \ ATOM 199 C LEU 24 15.227 19.106 -1.661 1.00169.48 C \ ATOM 200 O LEU 24 15.773 20.149 -2.015 1.00169.48 O \ ATOM 201 N LYS 25 14.809 18.877 -0.401 1.00276.30 N \ ATOM 202 CA LYS 25 14.916 19.836 0.647 1.00276.30 C \ ATOM 203 CB LYS 25 16.191 20.698 0.663 1.00276.30 C \ ATOM 204 CG LYS 25 17.427 19.974 1.199 1.00276.30 C \ ATOM 205 CD LYS 25 18.705 20.817 1.171 1.00276.30 C \ ATOM 206 CE LYS 25 18.778 21.850 2.301 1.00276.30 C \ ATOM 207 NZ LYS 25 19.125 21.195 3.583 1.00276.30 N \ ATOM 208 C LYS 25 13.804 20.740 0.379 1.00276.30 C \ ATOM 209 O LYS 25 13.050 20.513 -0.567 1.00276.30 O \ ATOM 210 N ARG 26 13.641 21.775 1.205 1.00329.96 N \ ATOM 211 CA ARG 26 12.587 22.633 0.808 1.00329.96 C \ ATOM 212 CB ARG 26 12.263 23.743 1.806 1.00329.96 C \ ATOM 213 CG ARG 26 10.894 24.363 1.545 1.00329.96 C \ ATOM 214 CD ARG 26 10.406 25.210 2.711 1.00329.96 C \ ATOM 215 NE ARG 26 10.417 24.324 3.907 1.00329.96 N \ ATOM 216 CZ ARG 26 10.366 24.878 5.150 1.00329.96 C \ ATOM 217 NH1 ARG 26 10.214 26.229 5.282 1.00329.96 N \ ATOM 218 NH2 ARG 26 10.482 24.090 6.258 1.00329.96 N \ ATOM 219 C ARG 26 13.100 23.234 -0.448 1.00329.96 C \ ATOM 220 O ARG 26 14.161 23.859 -0.462 1.00329.96 O \ ATOM 221 N ARG 27 12.361 22.990 -1.538 1.00291.48 N \ ATOM 222 CA ARG 27 12.770 23.361 -2.853 1.00291.48 C \ ATOM 223 CB ARG 27 11.644 23.135 -3.878 1.00291.48 C \ ATOM 224 CG ARG 27 12.009 23.371 -5.345 1.00291.48 C \ ATOM 225 CD ARG 27 10.817 23.123 -6.271 1.00291.48 C \ ATOM 226 NE ARG 27 9.656 23.798 -5.627 1.00291.48 N \ ATOM 227 CZ ARG 27 8.428 23.814 -6.219 1.00291.48 C \ ATOM 228 NH1 ARG 27 8.244 23.229 -7.439 1.00291.48 N \ ATOM 229 NH2 ARG 27 7.384 24.420 -5.580 1.00291.48 N \ ATOM 230 C ARG 27 13.142 24.798 -2.820 1.00291.48 C \ ATOM 231 O ARG 27 12.297 25.690 -2.769 1.00291.48 O \ ATOM 232 N GLY 28 14.469 25.025 -2.821 1.00 40.06 N \ ATOM 233 CA GLY 28 15.015 26.344 -2.798 1.00 40.06 C \ ATOM 234 C GLY 28 15.102 26.792 -1.346 1.00 40.06 C \ ATOM 235 O GLY 28 14.703 27.953 -1.060 1.00 40.06 O \ ATOM 236 OXT GLY 28 15.567 25.974 -0.509 1.00 40.06 O \ TER 237 GLY 28 \ END \ \ ""","model_2") cmd.show_as("cartoon" ,"model_2") cmd.spectrum(expression="count",selection="model_2_aln",byres=2)