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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/12 21:48:12 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 80.3673 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 35.714 \ ATOM 1 N VAL 1 4.568 16.699 5.276 1.00 72.66 N \ ATOM 2 CA VAL 1 4.615 17.399 3.973 1.00 72.66 C \ ATOM 3 CB VAL 1 5.990 17.259 3.392 1.00 72.66 C \ ATOM 4 CG1 VAL 1 6.045 17.979 2.034 1.00 72.66 C \ ATOM 5 CG2 VAL 1 7.001 17.766 4.432 1.00 72.66 C \ ATOM 6 C VAL 1 3.603 16.766 3.074 1.00 72.66 C \ ATOM 7 O VAL 1 3.088 15.695 3.377 1.00 72.66 O \ ATOM 8 N GLY 2 3.284 17.415 1.941 1.00 16.32 N \ ATOM 9 CA GLY 2 2.261 16.917 1.073 1.00 16.32 C \ ATOM 10 C GLY 2 2.643 15.575 0.541 1.00 16.32 C \ ATOM 11 O GLY 2 1.820 14.661 0.512 1.00 16.32 O \ ATOM 12 N LYS 3 3.907 15.417 0.107 1.00 87.48 N \ ATOM 13 CA LYS 3 4.330 14.178 -0.484 1.00 87.48 C \ ATOM 14 CB LYS 3 5.812 14.196 -0.893 1.00 87.48 C \ ATOM 15 CG LYS 3 6.152 15.178 -2.014 1.00 87.48 C \ ATOM 16 CD LYS 3 7.648 15.486 -2.108 1.00 87.48 C \ ATOM 17 CE LYS 3 8.122 16.483 -1.047 1.00 87.48 C \ ATOM 18 NZ LYS 3 7.768 16.000 0.308 1.00 87.48 N \ ATOM 19 C LYS 3 4.227 13.085 0.526 1.00 87.48 C \ ATOM 20 O LYS 3 3.662 12.024 0.261 1.00 87.48 O \ ATOM 21 N THR 4 4.786 13.337 1.723 1.00 99.73 N \ ATOM 22 CA THR 4 4.868 12.361 2.771 1.00 99.73 C \ ATOM 23 CB THR 4 5.652 12.856 3.947 1.00 99.73 C \ ATOM 24 OG1 THR 4 5.024 14.004 4.500 1.00 99.73 O \ ATOM 25 CG2 THR 4 7.071 13.206 3.478 1.00 99.73 C \ ATOM 26 C THR 4 3.513 12.006 3.279 1.00 99.73 C \ ATOM 27 O THR 4 3.205 10.833 3.477 1.00 99.73 O \ ATOM 28 N VAL 5 2.661 13.018 3.501 1.00 88.69 N \ ATOM 29 CA VAL 5 1.378 12.773 4.090 1.00 88.69 C \ ATOM 30 CB VAL 5 0.566 14.020 4.275 1.00 88.69 C \ ATOM 31 CG1 VAL 5 -0.846 13.620 4.737 1.00 88.69 C \ ATOM 32 CG2 VAL 5 1.292 14.928 5.275 1.00 88.69 C \ ATOM 33 C VAL 5 0.586 11.876 3.204 1.00 88.69 C \ ATOM 34 O VAL 5 -0.093 10.971 3.687 1.00 88.69 O \ ATOM 35 N ALA 6 0.650 12.091 1.880 1.00 32.13 N \ ATOM 36 CA ALA 6 -0.184 11.315 1.009 1.00 32.13 C \ ATOM 37 CB ALA 6 0.015 11.690 -0.472 1.00 32.13 C \ ATOM 38 C ALA 6 0.153 9.862 1.140 1.00 32.13 C \ ATOM 39 O ALA 6 -0.731 9.016 1.286 1.00 32.13 O \ ATOM 40 N ILE 7 1.456 9.535 1.109 1.00118.21 N \ ATOM 41 CA ILE 7 1.859 8.160 1.145 1.00118.21 C \ ATOM 42 CB ILE 7 3.325 7.933 0.938 1.00118.21 C \ ATOM 43 CG2 ILE 7 4.087 8.633 2.076 1.00118.21 C \ ATOM 44 CG1 ILE 7 3.595 6.420 0.859 1.00118.21 C \ ATOM 45 CD1 ILE 7 2.878 5.739 -0.305 1.00118.21 C \ ATOM 46 C ILE 7 1.497 7.537 2.452 1.00118.21 C \ ATOM 47 O ILE 7 1.007 6.411 2.489 1.00118.21 O \ ATOM 48 N ILE 8 1.716 8.257 3.564 1.00 90.54 N \ ATOM 49 CA ILE 8 1.445 7.687 4.847 1.00 90.54 C \ ATOM 50 CB ILE 8 1.818 8.614 5.984 1.00 90.54 C \ ATOM 51 CG2 ILE 8 0.840 9.800 6.016 1.00 90.54 C \ ATOM 52 CG1 ILE 8 1.940 7.844 7.318 1.00 90.54 C \ ATOM 53 CD1 ILE 8 0.671 7.131 7.788 1.00 90.54 C \ ATOM 54 C ILE 8 -0.015 7.369 4.895 1.00 90.54 C \ ATOM 55 O ILE 8 -0.407 6.312 5.385 1.00 90.54 O \ ATOM 56 N VAL 9 -0.861 8.269 4.359 1.00 33.29 N \ ATOM 57 CA VAL 9 -2.277 8.052 4.412 1.00 33.29 C \ ATOM 58 CB VAL 9 -3.045 9.139 3.715 1.00 33.29 C \ ATOM 59 CG1 VAL 9 -4.530 8.745 3.682 1.00 33.29 C \ ATOM 60 CG2 VAL 9 -2.767 10.479 4.420 1.00 33.29 C \ ATOM 61 C VAL 9 -2.613 6.760 3.725 1.00 33.29 C \ ATOM 62 O VAL 9 -3.297 5.910 4.291 1.00 33.29 O \ ATOM 63 N GLY 10 -2.138 6.571 2.480 1.00 25.27 N \ ATOM 64 CA GLY 10 -2.456 5.376 1.750 1.00 25.27 C \ ATOM 65 C GLY 10 -1.832 4.193 2.409 1.00 25.27 C \ ATOM 66 O GLY 10 -2.453 3.136 2.519 1.00 25.27 O \ ATOM 67 N VAL 11 -0.571 4.343 2.852 1.00 39.79 N \ ATOM 68 CA VAL 11 0.147 3.243 3.421 1.00 39.79 C \ ATOM 69 CB VAL 11 1.563 3.581 3.775 1.00 39.79 C \ ATOM 70 CG1 VAL 11 2.136 2.399 4.576 1.00 39.79 C \ ATOM 71 CG2 VAL 11 2.342 3.878 2.482 1.00 39.79 C \ ATOM 72 C VAL 11 -0.498 2.765 4.678 1.00 39.79 C \ ATOM 73 O VAL 11 -0.728 1.569 4.832 1.00 39.79 O \ ATOM 74 N VAL 12 -0.810 3.679 5.619 1.00 89.40 N \ ATOM 75 CA VAL 12 -1.336 3.192 6.861 1.00 89.40 C \ ATOM 76 CB VAL 12 -1.453 4.213 7.966 1.00 89.40 C \ ATOM 77 CG1 VAL 12 -2.694 5.101 7.765 1.00 89.40 C \ ATOM 78 CG2 VAL 12 -1.430 3.451 9.303 1.00 89.40 C \ ATOM 79 C VAL 12 -2.680 2.587 6.630 1.00 89.40 C \ ATOM 80 O VAL 12 -2.994 1.531 7.178 1.00 89.40 O \ ATOM 81 N ALA 13 -3.517 3.248 5.808 1.00 31.97 N \ ATOM 82 CA ALA 13 -4.845 2.774 5.554 1.00 31.97 C \ ATOM 83 CB ALA 13 -5.672 3.725 4.671 1.00 31.97 C \ ATOM 84 C ALA 13 -4.778 1.455 4.857 1.00 31.97 C \ ATOM 85 O ALA 13 -5.539 0.544 5.178 1.00 31.97 O \ ATOM 86 N GLY 14 -3.865 1.313 3.877 1.00 28.88 N \ ATOM 87 CA GLY 14 -3.803 0.089 3.128 1.00 28.88 C \ ATOM 88 C GLY 14 -3.416 -1.051 4.027 1.00 28.88 C \ ATOM 89 O GLY 14 -4.031 -2.114 4.002 1.00 28.88 O \ ATOM 90 N LEU 15 -2.370 -0.863 4.846 1.00 82.08 N \ ATOM 91 CA LEU 15 -1.864 -1.865 5.742 1.00 82.08 C \ ATOM 92 CB LEU 15 -0.580 -1.365 6.425 1.00 82.08 C \ ATOM 93 CG LEU 15 0.084 -2.331 7.417 1.00 82.08 C \ ATOM 94 CD1 LEU 15 0.569 -3.621 6.730 1.00 82.08 C \ ATOM 95 CD2 LEU 15 1.210 -1.605 8.171 1.00 82.08 C \ ATOM 96 C LEU 15 -2.900 -2.122 6.785 1.00 82.08 C \ ATOM 97 O LEU 15 -3.142 -3.261 7.182 1.00 82.08 O \ ATOM 98 N ALA 16 -3.558 -1.040 7.237 1.00 35.36 N \ ATOM 99 CA ALA 16 -4.537 -1.113 8.277 1.00 35.36 C \ ATOM 100 CB ALA 16 -5.117 0.263 8.639 1.00 35.36 C \ ATOM 101 C ALA 16 -5.665 -1.988 7.834 1.00 35.36 C \ ATOM 102 O ALA 16 -6.131 -2.822 8.606 1.00 35.36 O \ ATOM 103 N ILE 17 -6.133 -1.853 6.577 1.00122.18 N \ ATOM 104 CA ILE 17 -7.220 -2.699 6.167 1.00122.18 C \ ATOM 105 CB ILE 17 -7.764 -2.453 4.782 1.00122.18 C \ ATOM 106 CG2 ILE 17 -6.669 -2.741 3.744 1.00122.18 C \ ATOM 107 CG1 ILE 17 -9.027 -3.309 4.567 1.00122.18 C \ ATOM 108 CD1 ILE 17 -10.210 -2.919 5.455 1.00122.18 C \ ATOM 109 C ILE 17 -6.755 -4.113 6.229 1.00122.18 C \ ATOM 110 O ILE 17 -7.498 -4.994 6.662 1.00122.18 O \ ATOM 111 N LEU 18 -5.505 -4.379 5.807 1.00 61.42 N \ ATOM 112 CA LEU 18 -5.067 -5.743 5.840 1.00 61.42 C \ ATOM 113 CB LEU 18 -3.620 -5.977 5.386 1.00 61.42 C \ ATOM 114 CG LEU 18 -3.205 -7.454 5.553 1.00 61.42 C \ ATOM 115 CD1 LEU 18 -3.876 -8.355 4.505 1.00 61.42 C \ ATOM 116 CD2 LEU 18 -1.682 -7.616 5.617 1.00 61.42 C \ ATOM 117 C LEU 18 -5.081 -6.234 7.251 1.00 61.42 C \ ATOM 118 O LEU 18 -5.588 -7.316 7.534 1.00 61.42 O \ ATOM 119 N ILE 19 -4.549 -5.428 8.185 1.00126.39 N \ ATOM 120 CA ILE 19 -4.387 -5.879 9.535 1.00126.39 C \ ATOM 121 CB ILE 19 -3.665 -4.890 10.417 1.00126.39 C \ ATOM 122 CG2 ILE 19 -4.602 -3.707 10.707 1.00126.39 C \ ATOM 123 CG1 ILE 19 -3.143 -5.582 11.688 1.00126.39 C \ ATOM 124 CD1 ILE 19 -2.014 -6.576 11.408 1.00126.39 C \ ATOM 125 C ILE 19 -5.720 -6.187 10.152 1.00126.39 C \ ATOM 126 O ILE 19 -5.845 -7.180 10.863 1.00126.39 O \ ATOM 127 N VAL 20 -6.751 -5.352 9.906 1.00 96.32 N \ ATOM 128 CA VAL 20 -8.015 -5.546 10.561 1.00 96.32 C \ ATOM 129 CB VAL 20 -9.018 -4.476 10.231 1.00 96.32 C \ ATOM 130 CG1 VAL 20 -9.244 -4.437 8.710 1.00 96.32 C \ ATOM 131 CG2 VAL 20 -10.294 -4.749 11.046 1.00 96.32 C \ ATOM 132 C VAL 20 -8.617 -6.868 10.205 1.00 96.32 C \ ATOM 133 O VAL 20 -8.984 -7.641 11.090 1.00 96.32 O \ ATOM 134 N PHE 21 -8.695 -7.192 8.903 1.00 95.27 N \ ATOM 135 CA PHE 21 -9.306 -8.427 8.507 1.00 95.27 C \ ATOM 136 CB PHE 21 -9.388 -8.596 6.980 1.00 95.27 C \ ATOM 137 CG PHE 21 -10.001 -9.925 6.695 1.00 95.27 C \ ATOM 138 CD1 PHE 21 -11.347 -10.146 6.888 1.00 95.27 C \ ATOM 139 CD2 PHE 21 -9.226 -10.953 6.212 1.00 95.27 C \ ATOM 140 CE1 PHE 21 -11.900 -11.375 6.616 1.00 95.27 C \ ATOM 141 CE2 PHE 21 -9.775 -12.182 5.939 1.00 95.27 C \ ATOM 142 CZ PHE 21 -11.113 -12.401 6.149 1.00 95.27 C \ ATOM 143 C PHE 21 -8.474 -9.529 9.066 1.00 95.27 C \ ATOM 144 O PHE 21 -8.976 -10.563 9.510 1.00 95.27 O \ ATOM 145 N LEU 22 -7.157 -9.310 9.064 1.00149.41 N \ ATOM 146 CA LEU 22 -6.207 -10.268 9.533 1.00149.41 C \ ATOM 147 CB LEU 22 -4.812 -9.625 9.514 1.00149.41 C \ ATOM 148 CG LEU 22 -3.672 -10.470 10.088 1.00149.41 C \ ATOM 149 CD1 LEU 22 -3.392 -11.701 9.216 1.00149.41 C \ ATOM 150 CD2 LEU 22 -2.433 -9.593 10.331 1.00149.41 C \ ATOM 151 C LEU 22 -6.513 -10.610 10.961 1.00149.41 C \ ATOM 152 O LEU 22 -6.615 -11.784 11.317 1.00149.41 O \ ATOM 153 N SER 23 -6.679 -9.588 11.818 1.00 80.96 N \ ATOM 154 CA SER 23 -6.897 -9.838 13.213 1.00 80.96 C \ ATOM 155 CB SER 23 -6.763 -8.556 14.060 1.00 80.96 C \ ATOM 156 OG SER 23 -6.965 -8.837 15.435 1.00 80.96 O \ ATOM 157 C SER 23 -8.265 -10.416 13.420 1.00 80.96 C \ ATOM 158 O SER 23 -8.454 -11.299 14.256 1.00 80.96 O \ ATOM 159 N ILE 24 -9.257 -9.941 12.639 1.00105.04 N \ ATOM 160 CA ILE 24 -10.616 -10.353 12.848 1.00105.04 C \ ATOM 161 CB ILE 24 -11.618 -9.571 12.030 1.00105.04 C \ ATOM 162 CG2 ILE 24 -11.569 -8.113 12.519 1.00105.04 C \ ATOM 163 CG1 ILE 24 -11.392 -9.729 10.515 1.00105.04 C \ ATOM 164 CD1 ILE 24 -12.526 -9.159 9.661 1.00105.04 C \ ATOM 165 C ILE 24 -10.781 -11.816 12.586 1.00105.04 C \ ATOM 166 O ILE 24 -11.426 -12.511 13.370 1.00105.04 O \ ATOM 167 N CYS 25 -10.193 -12.344 11.495 1.00154.54 N \ ATOM 168 CA CYS 25 -10.426 -13.735 11.226 1.00154.54 C \ ATOM 169 CB CYS 25 -10.468 -14.089 9.730 1.00154.54 C \ ATOM 170 SG CYS 25 -11.966 -13.499 8.891 1.00154.54 S \ ATOM 171 C CYS 25 -9.320 -14.555 11.791 1.00154.54 C \ ATOM 172 O CYS 25 -8.734 -15.376 11.087 1.00154.54 O \ ATOM 173 N ARG 26 -9.028 -14.397 13.093 1.00180.10 N \ ATOM 174 CA ARG 26 -7.973 -15.190 13.651 1.00180.10 C \ ATOM 175 CB ARG 26 -6.605 -14.981 12.974 1.00180.10 C \ ATOM 176 CG ARG 26 -5.566 -16.054 13.336 1.00180.10 C \ ATOM 177 CD ARG 26 -4.193 -15.866 12.676 1.00180.10 C \ ATOM 178 NE ARG 26 -4.359 -16.059 11.205 1.00180.10 N \ ATOM 179 CZ ARG 26 -3.267 -16.058 10.387 1.00180.10 C \ ATOM 180 NH1 ARG 26 -2.018 -15.934 10.922 1.00180.10 N \ ATOM 181 NH2 ARG 26 -3.412 -16.173 9.034 1.00180.10 N \ ATOM 182 C ARG 26 -7.847 -14.780 15.079 1.00180.10 C \ ATOM 183 O ARG 26 -8.841 -14.502 15.746 1.00180.10 O \ ATOM 184 N ARG 27 -6.602 -14.731 15.588 1.00294.98 N \ ATOM 185 CA ARG 27 -6.381 -14.403 16.961 1.00294.98 C \ ATOM 186 CB ARG 27 -5.295 -15.271 17.618 1.00294.98 C \ ATOM 187 CG ARG 27 -5.620 -16.762 17.555 1.00294.98 C \ ATOM 188 CD ARG 27 -4.757 -17.666 18.447 1.00294.98 C \ ATOM 189 NE ARG 27 -3.374 -17.733 17.893 1.00294.98 N \ ATOM 190 CZ ARG 27 -2.570 -18.796 18.204 1.00294.98 C \ ATOM 191 NH1 ARG 27 -3.064 -19.866 18.896 1.00294.98 N \ ATOM 192 NH2 ARG 27 -1.260 -18.795 17.827 1.00294.98 N \ ATOM 193 C ARG 27 -5.896 -12.997 17.034 1.00294.98 C \ ATOM 194 O ARG 27 -5.130 -12.547 16.185 1.00294.98 O \ ATOM 195 N ALA 28 -6.362 -12.253 18.053 1.00 44.14 N \ ATOM 196 CA ALA 28 -5.910 -10.909 18.239 1.00 44.14 C \ ATOM 197 CB ALA 28 -6.645 -10.160 19.366 1.00 44.14 C \ ATOM 198 C ALA 28 -4.455 -11.019 18.676 1.00 44.14 C \ ATOM 199 O ALA 28 -3.967 -12.166 18.870 1.00 44.14 O \ ATOM 200 OXT ALA 28 -3.807 -9.948 18.834 1.00 44.14 O \ TER 201 ALA 28 \ END \ \ ""","model_3") cmd.show_as("cartoon" ,"model_3") cmd.spectrum(expression="count",selection="model_3_aln",byres=2)