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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/09 16:14:15 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 103.7060 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 38.095 \ ATOM 1 N TYR 1 4.975 -3.579 -12.732 1.00 78.52 N \ ATOM 2 CA TYR 1 3.723 -4.333 -12.962 1.00 78.52 C \ ATOM 3 CB TYR 1 2.592 -3.780 -12.076 1.00 78.52 C \ ATOM 4 CG TYR 1 2.964 -4.084 -10.664 1.00 78.52 C \ ATOM 5 CD1 TYR 1 3.855 -3.281 -9.991 1.00 78.52 C \ ATOM 6 CD2 TYR 1 2.426 -5.172 -10.015 1.00 78.52 C \ ATOM 7 CE1 TYR 1 4.204 -3.554 -8.689 1.00 78.52 C \ ATOM 8 CE2 TYR 1 2.770 -5.451 -8.712 1.00 78.52 C \ ATOM 9 CZ TYR 1 3.661 -4.643 -8.049 1.00 78.52 C \ ATOM 10 OH TYR 1 4.015 -4.931 -6.713 1.00 78.52 O \ ATOM 11 C TYR 1 3.310 -4.255 -14.392 1.00 78.52 C \ ATOM 12 O TYR 1 3.711 -3.349 -15.121 1.00 78.52 O \ ATOM 13 N TYR 2 2.509 -5.244 -14.829 1.00 98.69 N \ ATOM 14 CA TYR 2 2.089 -5.311 -16.194 1.00 98.69 C \ ATOM 15 CB TYR 2 2.775 -6.477 -16.930 1.00 98.69 C \ ATOM 16 CG TYR 2 2.206 -6.632 -18.295 1.00 98.69 C \ ATOM 17 CD1 TYR 2 1.092 -7.415 -18.496 1.00 98.69 C \ ATOM 18 CD2 TYR 2 2.784 -6.001 -19.370 1.00 98.69 C \ ATOM 19 CE1 TYR 2 0.563 -7.575 -19.753 1.00 98.69 C \ ATOM 20 CE2 TYR 2 2.258 -6.157 -20.630 1.00 98.69 C \ ATOM 21 CZ TYR 2 1.146 -6.943 -20.822 1.00 98.69 C \ ATOM 22 OH TYR 2 0.604 -7.107 -22.113 1.00 98.69 O \ ATOM 23 C TYR 2 0.612 -5.536 -16.231 1.00 98.69 C \ ATOM 24 O TYR 2 0.076 -6.366 -15.499 1.00 98.69 O \ ATOM 25 N CYS 3 -0.087 -4.773 -17.093 1.00 81.24 N \ ATOM 26 CA CYS 3 -1.498 -4.943 -17.293 1.00 81.24 C \ ATOM 27 CB CYS 3 -2.337 -3.674 -17.133 1.00 81.24 C \ ATOM 28 SG CYS 3 -2.895 -3.386 -15.442 1.00 81.24 S \ ATOM 29 C CYS 3 -1.717 -5.331 -18.718 1.00 81.24 C \ ATOM 30 O CYS 3 -0.988 -4.902 -19.610 1.00 81.24 O \ ATOM 31 N ARG 4 -2.762 -6.150 -18.957 1.00130.04 N \ ATOM 32 CA ARG 4 -3.100 -6.564 -20.288 1.00130.04 C \ ATOM 33 CB ARG 4 -4.362 -7.440 -20.378 1.00130.04 C \ ATOM 34 CG ARG 4 -4.362 -8.718 -19.539 1.00130.04 C \ ATOM 35 CD ARG 4 -5.531 -9.639 -19.899 1.00130.04 C \ ATOM 36 NE ARG 4 -5.778 -10.533 -18.734 1.00130.04 N \ ATOM 37 CZ ARG 4 -5.822 -11.884 -18.910 1.00130.04 C \ ATOM 38 NH1 ARG 4 -5.550 -12.422 -20.135 1.00130.04 N \ ATOM 39 NH2 ARG 4 -6.131 -12.699 -17.860 1.00130.04 N \ ATOM 40 C ARG 4 -3.477 -5.321 -21.015 1.00130.04 C \ ATOM 41 O ARG 4 -3.156 -5.140 -22.189 1.00130.04 O \ ATOM 42 N CYS 5 -4.178 -4.425 -20.298 1.00 63.71 N \ ATOM 43 CA CYS 5 -4.665 -3.204 -20.864 1.00 63.71 C \ ATOM 44 CB CYS 5 -5.421 -2.332 -19.848 1.00 63.71 C \ ATOM 45 SG CYS 5 -6.025 -0.777 -20.577 1.00 63.71 S \ ATOM 46 C CYS 5 -3.484 -2.432 -21.334 1.00 63.71 C \ ATOM 47 O CYS 5 -3.532 -1.793 -22.384 1.00 63.71 O \ ATOM 48 N GLY 6 -2.374 -2.490 -20.578 1.00 24.28 N \ ATOM 49 CA GLY 6 -1.217 -1.757 -20.987 1.00 24.28 C \ ATOM 50 C GLY 6 -1.129 -0.520 -20.160 1.00 24.28 C \ ATOM 51 O GLY 6 -0.234 0.301 -20.361 1.00 24.28 O \ ATOM 52 N VAL 7 -2.077 -0.332 -19.222 1.00 93.91 N \ ATOM 53 CA VAL 7 -1.954 0.804 -18.361 1.00 93.91 C \ ATOM 54 CB VAL 7 -2.887 1.929 -18.688 1.00 93.91 C \ ATOM 55 CG1 VAL 7 -4.339 1.462 -18.497 1.00 93.91 C \ ATOM 56 CG2 VAL 7 -2.491 3.125 -17.811 1.00 93.91 C \ ATOM 57 C VAL 7 -2.228 0.352 -16.963 1.00 93.91 C \ ATOM 58 O VAL 7 -2.970 -0.603 -16.745 1.00 93.91 O \ ATOM 59 N CYS 8 -1.597 1.023 -15.978 1.00 92.12 N \ ATOM 60 CA CYS 8 -1.764 0.682 -14.593 1.00 92.12 C \ ATOM 61 CB CYS 8 -0.561 -0.040 -13.967 1.00 92.12 C \ ATOM 62 SG CYS 8 -0.353 -1.742 -14.547 1.00 92.12 S \ ATOM 63 C CYS 8 -1.864 1.959 -13.836 1.00 92.12 C \ ATOM 64 O CYS 8 -1.846 3.045 -14.413 1.00 92.12 O \ ATOM 65 N GLY 9 -1.989 1.846 -12.501 1.00 41.27 N \ ATOM 66 CA GLY 9 -2.031 3.032 -11.705 1.00 41.27 C \ ATOM 67 C GLY 9 -1.693 2.664 -10.300 1.00 41.27 C \ ATOM 68 O GLY 9 -2.271 1.747 -9.717 1.00 41.27 O \ ATOM 69 N ASN 10 -0.723 3.388 -9.716 1.00 90.74 N \ ATOM 70 CA ASN 10 -0.403 3.151 -8.341 1.00 90.74 C \ ATOM 71 CB ASN 10 0.879 2.324 -8.141 1.00 90.74 C \ ATOM 72 CG ASN 10 0.915 1.893 -6.684 1.00 90.74 C \ ATOM 73 OD1 ASN 10 0.643 0.737 -6.363 1.00 90.74 O \ ATOM 74 ND2 ASN 10 1.251 2.848 -5.777 1.00 90.74 N \ ATOM 75 C ASN 10 -0.196 4.491 -7.714 1.00 90.74 C \ ATOM 76 O ASN 10 0.519 5.335 -8.249 1.00 90.74 O \ ATOM 77 N GLN 11 -0.822 4.728 -6.549 1.00 54.36 N \ ATOM 78 CA GLN 11 -0.700 6.003 -5.909 1.00 54.36 C \ ATOM 79 CB GLN 11 -2.070 6.618 -5.579 1.00 54.36 C \ ATOM 80 CG GLN 11 -2.915 6.886 -6.827 1.00 54.36 C \ ATOM 81 CD GLN 11 -4.327 7.241 -6.382 1.00 54.36 C \ ATOM 82 OE1 GLN 11 -4.674 7.117 -5.208 1.00 54.36 O \ ATOM 83 NE2 GLN 11 -5.176 7.689 -7.348 1.00 54.36 N \ ATOM 84 C GLN 11 0.024 5.786 -4.626 1.00 54.36 C \ ATOM 85 O GLN 11 -0.055 4.712 -4.032 1.00 54.36 O \ ATOM 86 N PRO 12 0.756 6.771 -4.181 1.00169.60 N \ ATOM 87 CA PRO 12 1.415 6.608 -2.929 1.00169.60 C \ ATOM 88 CD PRO 12 1.461 7.702 -5.037 1.00169.60 C \ ATOM 89 CB PRO 12 2.344 7.814 -2.769 1.00169.60 C \ ATOM 90 CG PRO 12 2.068 8.685 -4.018 1.00169.60 C \ ATOM 91 C PRO 12 0.342 6.454 -1.917 1.00169.60 C \ ATOM 92 O PRO 12 -0.431 7.389 -1.710 1.00169.60 O \ ATOM 93 N SER 13 0.302 5.287 -1.258 1.00201.64 N \ ATOM 94 CA SER 13 -0.749 5.008 -0.335 1.00201.64 C \ ATOM 95 CB SER 13 -2.139 5.437 -0.830 1.00201.64 C \ ATOM 96 OG SER 13 -3.126 5.130 0.144 1.00201.64 O \ ATOM 97 C SER 13 -0.764 3.528 -0.206 1.00201.64 C \ ATOM 98 O SER 13 0.120 2.932 0.407 1.00201.64 O \ ATOM 99 N GLN 14 -1.802 2.901 -0.789 1.00144.67 N \ ATOM 100 CA GLN 14 -1.922 1.477 -0.737 1.00144.67 C \ ATOM 101 CB GLN 14 -3.218 0.940 -1.363 1.00144.67 C \ ATOM 102 CG GLN 14 -4.466 1.298 -0.556 1.00144.67 C \ ATOM 103 CD GLN 14 -4.494 0.396 0.669 1.00144.67 C \ ATOM 104 OE1 GLN 14 -3.470 0.146 1.304 1.00144.67 O \ ATOM 105 NE2 GLN 14 -5.701 -0.126 1.009 1.00144.67 N \ ATOM 106 C GLN 14 -0.769 0.885 -1.476 1.00144.67 C \ ATOM 107 O GLN 14 -0.307 1.429 -2.476 1.00144.67 O \ ATOM 108 N TRP 15 -0.243 -0.234 -0.942 1.00113.24 N \ ATOM 109 CA TRP 15 0.885 -0.908 -1.511 1.00113.24 C \ ATOM 110 CB TRP 15 1.482 -1.940 -0.535 1.00113.24 C \ ATOM 111 CG TRP 15 2.083 -1.276 0.691 1.00113.24 C \ ATOM 112 CD2 TRP 15 3.470 -0.928 0.840 1.00113.24 C \ ATOM 113 CD1 TRP 15 1.462 -0.872 1.839 1.00113.24 C \ ATOM 114 NE1 TRP 15 2.370 -0.281 2.685 1.00113.24 N \ ATOM 115 CE2 TRP 15 3.612 -0.314 2.087 1.00113.24 C \ ATOM 116 CE3 TRP 15 4.538 -1.106 0.007 1.00113.24 C \ ATOM 117 CZ2 TRP 15 4.829 0.135 2.520 1.00113.24 C \ ATOM 118 CZ3 TRP 15 5.762 -0.658 0.447 1.00113.24 C \ ATOM 119 CH2 TRP 15 5.904 -0.049 1.678 1.00113.24 C \ ATOM 120 C TRP 15 0.520 -1.539 -2.827 1.00113.24 C \ ATOM 121 O TRP 15 1.279 -1.423 -3.788 1.00113.24 O \ ATOM 122 N PRO 16 -0.602 -2.203 -2.927 1.00125.09 N \ ATOM 123 CA PRO 16 -0.960 -2.808 -4.189 1.00125.09 C \ ATOM 124 CD PRO 16 -1.094 -2.975 -1.797 1.00125.09 C \ ATOM 125 CB PRO 16 -2.017 -3.860 -3.864 1.00125.09 C \ ATOM 126 CG PRO 16 -1.722 -4.242 -2.401 1.00125.09 C \ ATOM 127 C PRO 16 -1.448 -1.771 -5.154 1.00125.09 C \ ATOM 128 O PRO 16 -2.017 -0.777 -4.711 1.00125.09 O \ ATOM 129 N GLY 17 -1.275 -1.979 -6.475 1.00 24.40 N \ ATOM 130 CA GLY 17 -1.732 -0.984 -7.402 1.00 24.40 C \ ATOM 131 C GLY 17 -2.727 -1.625 -8.314 1.00 24.40 C \ ATOM 132 O GLY 17 -2.555 -2.764 -8.743 1.00 24.40 O \ ATOM 133 N ASN 18 -3.806 -0.887 -8.639 1.00105.11 N \ ATOM 134 CA ASN 18 -4.824 -1.404 -9.505 1.00105.11 C \ ATOM 135 CB ASN 18 -6.210 -0.774 -9.301 1.00105.11 C \ ATOM 136 CG ASN 18 -6.827 -1.354 -8.038 1.00105.11 C \ ATOM 137 OD1 ASN 18 -6.292 -2.279 -7.428 1.00105.11 O \ ATOM 138 ND2 ASN 18 -8.001 -0.796 -7.640 1.00105.11 N \ ATOM 139 C ASN 18 -4.441 -1.140 -10.921 1.00105.11 C \ ATOM 140 O ASN 18 -3.547 -0.345 -11.209 1.00105.11 O \ ATOM 141 N CYS 19 -5.123 -1.845 -11.842 1.00 72.98 N \ ATOM 142 CA CYS 19 -4.890 -1.704 -13.244 1.00 72.98 C \ ATOM 143 CB CYS 19 -5.484 -2.860 -14.061 1.00 72.98 C \ ATOM 144 SG CYS 19 -4.834 -2.884 -15.745 1.00 72.98 S \ ATOM 145 C CYS 19 -5.586 -0.454 -13.671 1.00 72.98 C \ ATOM 146 O CYS 19 -6.475 0.038 -12.978 1.00 72.98 O \ ATOM 147 N LYS 20 -5.180 0.115 -14.820 1.00 58.87 N \ ATOM 148 CA LYS 20 -5.851 1.289 -15.290 1.00 58.87 C \ ATOM 149 CB LYS 20 -4.896 2.397 -15.761 1.00 58.87 C \ ATOM 150 CG LYS 20 -5.607 3.710 -16.090 1.00 58.87 C \ ATOM 151 CD LYS 20 -4.660 4.895 -16.293 1.00 58.87 C \ ATOM 152 CE LYS 20 -4.481 5.298 -17.758 1.00 58.87 C \ ATOM 153 NZ LYS 20 -3.452 6.354 -17.872 1.00 58.87 N \ ATOM 154 C LYS 20 -6.667 0.849 -16.452 1.00 58.87 C \ ATOM 155 O LYS 20 -6.257 -0.031 -17.207 1.00 58.87 O \ ATOM 156 N ARG 21 -7.864 1.443 -16.608 1.00113.40 N \ ATOM 157 CA ARG 21 -8.749 1.024 -17.653 1.00113.40 C \ ATOM 158 CB ARG 21 -10.208 0.948 -17.172 1.00113.40 C \ ATOM 159 CG ARG 21 -11.115 0.043 -18.007 1.00113.40 C \ ATOM 160 CD ARG 21 -12.454 -0.230 -17.315 1.00113.40 C \ ATOM 161 NE ARG 21 -13.026 -1.472 -17.904 1.00113.40 N \ ATOM 162 CZ ARG 21 -14.067 -1.417 -18.783 1.00113.40 C \ ATOM 163 NH1 ARG 21 -14.611 -0.216 -19.137 1.00113.40 N \ ATOM 164 NH2 ARG 21 -14.571 -2.574 -19.306 1.00113.40 N \ ATOM 165 C ARG 21 -8.678 2.055 -18.774 1.00113.40 C \ ATOM 166 O ARG 21 -7.935 3.060 -18.618 1.00113.40 O \ ATOM 167 OXT ARG 21 -9.374 1.850 -19.803 1.00113.40 O \ TER 168 ARG 21 \ END \ \ ""","model_3") cmd.show_as("cartoon" ,"model_3") cmd.spectrum(expression="count",selection="model_3_aln",byres=2)