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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/11 06:46:58 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 7.9649 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 25.000 \ ATOM 1 N ILE 1 -1.869 10.281 -17.928 1.00 61.63 N \ ATOM 2 CA ILE 1 -0.629 9.885 -18.628 1.00 61.63 C \ ATOM 3 CB ILE 1 0.068 11.109 -19.202 1.00 61.63 C \ ATOM 4 CG2 ILE 1 1.313 10.649 -19.979 1.00 61.63 C \ ATOM 5 CG1 ILE 1 -0.859 11.929 -20.122 1.00 61.63 C \ ATOM 6 CD1 ILE 1 -1.911 12.775 -19.403 1.00 61.63 C \ ATOM 7 C ILE 1 0.237 9.261 -17.581 1.00 61.63 C \ ATOM 8 O ILE 1 -0.113 9.256 -16.401 1.00 61.63 O \ ATOM 9 N ARG 2 1.374 8.674 -17.986 1.00103.12 N \ ATOM 10 CA ARG 2 2.269 8.155 -17.004 1.00103.12 C \ ATOM 11 CB ARG 2 3.513 7.495 -17.623 1.00103.12 C \ ATOM 12 CG ARG 2 3.193 6.222 -18.409 1.00103.12 C \ ATOM 13 CD ARG 2 4.434 5.514 -18.959 1.00103.12 C \ ATOM 14 NE ARG 2 5.337 5.258 -17.801 1.00103.12 N \ ATOM 15 CZ ARG 2 5.168 4.149 -17.023 1.00103.12 C \ ATOM 16 NH1 ARG 2 4.227 3.214 -17.350 1.00103.12 N \ ATOM 17 NH2 ARG 2 5.949 3.973 -15.918 1.00103.12 N \ ATOM 18 C ARG 2 2.709 9.352 -16.233 1.00103.12 C \ ATOM 19 O ARG 2 2.857 9.310 -15.014 1.00103.12 O \ ATOM 20 N ALA 3 2.895 10.477 -16.946 1.00 15.83 N \ ATOM 21 CA ALA 3 3.331 11.681 -16.315 1.00 15.83 C \ ATOM 22 CB ALA 3 3.425 12.864 -17.295 1.00 15.83 C \ ATOM 23 C ALA 3 2.310 12.045 -15.290 1.00 15.83 C \ ATOM 24 O ALA 3 2.657 12.416 -14.170 1.00 15.83 O \ ATOM 25 N ARG 4 1.013 11.932 -15.635 1.00117.83 N \ ATOM 26 CA ARG 4 0.022 12.308 -14.669 1.00117.83 C \ ATOM 27 CB ARG 4 -1.421 12.306 -15.198 1.00117.83 C \ ATOM 28 CG ARG 4 -2.369 13.032 -14.246 1.00117.83 C \ ATOM 29 CD ARG 4 -3.854 12.794 -14.511 1.00117.83 C \ ATOM 30 NE ARG 4 -4.271 11.687 -13.606 1.00117.83 N \ ATOM 31 CZ ARG 4 -4.529 11.950 -12.292 1.00117.83 C \ ATOM 32 NH1 ARG 4 -4.324 13.205 -11.796 1.00117.83 N \ ATOM 33 NH2 ARG 4 -4.975 10.959 -11.466 1.00117.83 N \ ATOM 34 C ARG 4 0.070 11.303 -13.528 1.00117.83 C \ ATOM 35 O ARG 4 -0.091 11.727 -12.352 1.00117.83 O \ ATOM 36 OXT ARG 4 0.261 10.092 -13.819 1.00117.83 O \ TER 37 ARG 4 \ END \ \ ""","model_3") cmd.show_as("cartoon" ,"model_3") cmd.spectrum(expression="count",selection="model_3_aln",byres=2)