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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/09 12:18:05 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 108.6174 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 9.524 \ ATOM 1 N PHE 1 -13.271 -2.546 -11.169 1.00143.02 N \ ATOM 2 CA PHE 1 -11.819 -2.748 -11.375 1.00143.02 C \ ATOM 3 CB PHE 1 -11.120 -1.397 -11.599 1.00143.02 C \ ATOM 4 CG PHE 1 -11.728 -0.774 -12.807 1.00143.02 C \ ATOM 5 CD1 PHE 1 -11.246 -1.049 -14.066 1.00143.02 C \ ATOM 6 CD2 PHE 1 -12.794 0.085 -12.675 1.00143.02 C \ ATOM 7 CE1 PHE 1 -11.817 -0.470 -15.175 1.00143.02 C \ ATOM 8 CE2 PHE 1 -13.368 0.668 -13.779 1.00143.02 C \ ATOM 9 CZ PHE 1 -12.880 0.390 -15.032 1.00143.02 C \ ATOM 10 C PHE 1 -11.236 -3.365 -10.150 1.00143.02 C \ ATOM 11 O PHE 1 -10.984 -4.568 -10.096 1.00143.02 O \ ATOM 12 N ASN 2 -11.045 -2.533 -9.113 1.00112.19 N \ ATOM 13 CA ASN 2 -10.477 -2.992 -7.884 1.00112.19 C \ ATOM 14 CB ASN 2 -9.706 -1.905 -7.115 1.00112.19 C \ ATOM 15 CG ASN 2 -8.423 -1.610 -7.881 1.00112.19 C \ ATOM 16 OD1 ASN 2 -7.842 -2.501 -8.498 1.00112.19 O \ ATOM 17 ND2 ASN 2 -7.966 -0.330 -7.849 1.00112.19 N \ ATOM 18 C ASN 2 -11.626 -3.429 -7.049 1.00112.19 C \ ATOM 19 O ASN 2 -12.599 -3.960 -7.587 1.00112.19 O \ ATOM 20 N GLU 3 -11.530 -3.248 -5.715 1.00 93.96 N \ ATOM 21 CA GLU 3 -12.597 -3.679 -4.860 1.00 93.96 C \ ATOM 22 CB GLU 3 -12.461 -3.262 -3.384 1.00 93.96 C \ ATOM 23 CG GLU 3 -11.306 -3.915 -2.626 1.00 93.96 C \ ATOM 24 CD GLU 3 -10.102 -2.989 -2.703 1.00 93.96 C \ ATOM 25 OE1 GLU 3 -9.911 -2.329 -3.758 1.00 93.96 O \ ATOM 26 OE2 GLU 3 -9.352 -2.933 -1.692 1.00 93.96 O \ ATOM 27 C GLU 3 -13.849 -3.037 -5.348 1.00 93.96 C \ ATOM 28 O GLU 3 -14.009 -1.820 -5.300 1.00 93.96 O \ ATOM 29 N LEU 4 -14.763 -3.882 -5.855 1.00 77.71 N \ ATOM 30 CA LEU 4 -16.014 -3.425 -6.368 1.00 77.71 C \ ATOM 31 CB LEU 4 -16.851 -4.556 -6.982 1.00 77.71 C \ ATOM 32 CG LEU 4 -16.194 -5.217 -8.206 1.00 77.71 C \ ATOM 33 CD1 LEU 4 -16.074 -4.223 -9.370 1.00 77.71 C \ ATOM 34 CD2 LEU 4 -14.861 -5.895 -7.844 1.00 77.71 C \ ATOM 35 C LEU 4 -16.792 -2.878 -5.224 1.00 77.71 C \ ATOM 36 O LEU 4 -17.479 -1.866 -5.351 1.00 77.71 O \ ATOM 37 N ILE 5 -16.687 -3.543 -4.061 1.00115.36 N \ ATOM 38 CA ILE 5 -17.468 -3.159 -2.925 1.00115.36 C \ ATOM 39 CB ILE 5 -17.252 -4.067 -1.746 1.00115.36 C \ ATOM 40 CG2 ILE 5 -17.696 -5.475 -2.172 1.00115.36 C \ ATOM 41 CG1 ILE 5 -15.795 -4.016 -1.253 1.00115.36 C \ ATOM 42 CD1 ILE 5 -15.585 -4.638 0.128 1.00115.36 C \ ATOM 43 C ILE 5 -17.108 -1.767 -2.528 1.00115.36 C \ ATOM 44 O ILE 5 -17.989 -0.935 -2.317 1.00115.36 O \ ATOM 45 N CYS 6 -15.802 -1.458 -2.438 1.00178.71 N \ ATOM 46 CA CYS 6 -15.466 -0.114 -2.093 1.00178.71 C \ ATOM 47 CB CYS 6 -14.016 0.064 -1.613 1.00178.71 C \ ATOM 48 SG CYS 6 -13.630 1.792 -1.207 1.00178.71 S \ ATOM 49 C CYS 6 -15.608 0.651 -3.353 1.00178.71 C \ ATOM 50 O CYS 6 -14.628 0.963 -4.028 1.00178.71 O \ ATOM 51 N SER 7 -16.861 0.989 -3.689 1.00161.80 N \ ATOM 52 CA SER 7 -17.095 1.697 -4.899 1.00161.80 C \ ATOM 53 CB SER 7 -18.585 1.852 -5.243 1.00161.80 C \ ATOM 54 OG SER 7 -19.177 0.580 -5.462 1.00161.80 O \ ATOM 55 C SER 7 -16.537 3.051 -4.691 1.00161.80 C \ ATOM 56 O SER 7 -16.339 3.494 -3.560 1.00161.80 O \ ATOM 57 N SER 8 -16.234 3.735 -5.802 1.00 82.53 N \ ATOM 58 CA SER 8 -15.721 5.054 -5.657 1.00 82.53 C \ ATOM 59 CB SER 8 -15.472 5.760 -6.999 1.00 82.53 C \ ATOM 60 OG SER 8 -14.964 7.067 -6.771 1.00 82.53 O \ ATOM 61 C SER 8 -16.790 5.813 -4.959 1.00 82.53 C \ ATOM 62 O SER 8 -16.519 6.654 -4.105 1.00 82.53 O \ ATOM 63 N ALA 9 -18.052 5.508 -5.307 1.00 40.59 N \ ATOM 64 CA ALA 9 -19.139 6.221 -4.719 1.00 40.59 C \ ATOM 65 CB ALA 9 -20.506 5.805 -5.292 1.00 40.59 C \ ATOM 66 C ALA 9 -19.156 5.957 -3.250 1.00 40.59 C \ ATOM 67 O ALA 9 -19.263 6.888 -2.455 1.00 40.59 O \ ATOM 68 N THR 10 -19.023 4.682 -2.842 1.00117.17 N \ ATOM 69 CA THR 10 -19.074 4.419 -1.436 1.00117.17 C \ ATOM 70 CB THR 10 -19.000 2.954 -1.109 1.00117.17 C \ ATOM 71 OG1 THR 10 -17.794 2.395 -1.610 1.00117.17 O \ ATOM 72 CG2 THR 10 -20.215 2.249 -1.735 1.00117.17 C \ ATOM 73 C THR 10 -17.911 5.091 -0.792 1.00117.17 C \ ATOM 74 O THR 10 -18.069 5.854 0.160 1.00117.17 O \ ATOM 75 N CYS 11 -16.702 4.845 -1.326 1.00261.20 N \ ATOM 76 CA CYS 11 -15.539 5.442 -0.746 1.00261.20 C \ ATOM 77 CB CYS 11 -14.669 4.445 0.044 1.00261.20 C \ ATOM 78 SG CYS 11 -15.532 3.726 1.478 1.00261.20 S \ ATOM 79 C CYS 11 -14.708 5.943 -1.877 1.00261.20 C \ ATOM 80 O CYS 11 -14.674 5.342 -2.949 1.00261.20 O \ ATOM 81 N LEU 12 -14.021 7.080 -1.668 1.00185.74 N \ ATOM 82 CA LEU 12 -13.202 7.606 -2.713 1.00185.74 C \ ATOM 83 CB LEU 12 -12.640 9.011 -2.394 1.00185.74 C \ ATOM 84 CG LEU 12 -11.589 9.105 -1.267 1.00185.74 C \ ATOM 85 CD1 LEU 12 -10.218 8.585 -1.725 1.00185.74 C \ ATOM 86 CD2 LEU 12 -11.512 10.532 -0.697 1.00185.74 C \ ATOM 87 C LEU 12 -12.095 6.632 -2.951 1.00185.74 C \ ATOM 88 O LEU 12 -11.763 6.323 -4.094 1.00185.74 O \ ATOM 89 N VAL 13 -11.510 6.089 -1.867 1.00134.67 N \ ATOM 90 CA VAL 13 -10.437 5.163 -2.055 1.00134.67 C \ ATOM 91 CB VAL 13 -9.075 5.791 -1.984 1.00134.67 C \ ATOM 92 CG1 VAL 13 -8.823 6.248 -0.540 1.00134.67 C \ ATOM 93 CG2 VAL 13 -8.036 4.787 -2.509 1.00134.67 C \ ATOM 94 C VAL 13 -10.532 4.152 -0.962 1.00134.67 C \ ATOM 95 O VAL 13 -11.287 4.322 -0.007 1.00134.67 O \ ATOM 96 N MET 14 -9.763 3.056 -1.089 1.00274.15 N \ ATOM 97 CA MET 14 -9.822 2.008 -0.116 1.00274.15 C \ ATOM 98 CB MET 14 -9.281 0.656 -0.612 1.00274.15 C \ ATOM 99 CG MET 14 -7.768 0.645 -0.848 1.00274.15 C \ ATOM 100 SD MET 14 -7.219 1.450 -2.384 1.00274.15 S \ ATOM 101 CE MET 14 -7.521 -0.001 -3.437 1.00274.15 C \ ATOM 102 C MET 14 -9.016 2.392 1.081 1.00274.15 C \ ATOM 103 O MET 14 -8.247 3.353 1.058 1.00274.15 O \ ATOM 104 N ILE 15 -9.219 1.635 2.178 1.00319.32 N \ ATOM 105 CA ILE 15 -8.512 1.816 3.411 1.00319.32 C \ ATOM 106 CB ILE 15 -9.422 1.858 4.602 1.00319.32 C \ ATOM 107 CG2 ILE 15 -8.550 1.982 5.861 1.00319.32 C \ ATOM 108 CG1 ILE 15 -10.450 2.992 4.444 1.00319.32 C \ ATOM 109 CD1 ILE 15 -9.828 4.381 4.302 1.00319.32 C \ ATOM 110 C ILE 15 -7.640 0.603 3.536 1.00319.32 C \ ATOM 111 O ILE 15 -8.094 -0.518 3.309 1.00319.32 O \ ATOM 112 N LEU 16 -6.351 0.801 3.884 1.00238.56 N \ ATOM 113 CA LEU 16 -5.395 -0.273 3.866 1.00238.56 C \ ATOM 114 CB LEU 16 -3.940 0.217 3.767 1.00238.56 C \ ATOM 115 CG LEU 16 -3.673 1.009 2.473 1.00238.56 C \ ATOM 116 CD1 LEU 16 -2.185 1.359 2.325 1.00238.56 C \ ATOM 117 CD2 LEU 16 -4.246 0.283 1.245 1.00238.56 C \ ATOM 118 C LEU 16 -5.508 -1.186 5.050 1.00238.56 C \ ATOM 119 O LEU 16 -5.777 -0.766 6.175 1.00238.56 O \ ATOM 120 N PHE 17 -5.316 -2.493 4.767 1.00127.40 N \ ATOM 121 CA PHE 17 -5.301 -3.606 5.678 1.00127.40 C \ ATOM 122 CB PHE 17 -5.285 -4.953 4.932 1.00127.40 C \ ATOM 123 CG PHE 17 -5.255 -6.065 5.924 1.00127.40 C \ ATOM 124 CD1 PHE 17 -6.391 -6.410 6.619 1.00127.40 C \ ATOM 125 CD2 PHE 17 -4.098 -6.779 6.142 1.00127.40 C \ ATOM 126 CE1 PHE 17 -6.370 -7.439 7.531 1.00127.40 C \ ATOM 127 CE2 PHE 17 -4.071 -7.810 7.053 1.00127.40 C \ ATOM 128 CZ PHE 17 -5.208 -8.140 7.750 1.00127.40 C \ ATOM 129 C PHE 17 -4.068 -3.554 6.525 1.00127.40 C \ ATOM 130 O PHE 17 -4.096 -3.898 7.706 1.00127.40 O \ ATOM 131 N SER 18 -2.944 -3.131 5.921 1.00 91.73 N \ ATOM 132 CA SER 18 -1.657 -3.117 6.552 1.00 91.73 C \ ATOM 133 CB SER 18 -0.516 -2.778 5.578 1.00 91.73 C \ ATOM 134 OG SER 18 -0.408 -3.783 4.581 1.00 91.73 O \ ATOM 135 C SER 18 -1.633 -2.096 7.641 1.00 91.73 C \ ATOM 136 O SER 18 -0.623 -1.962 8.330 1.00 91.73 O \ ATOM 137 N TRP 19 -2.742 -1.359 7.836 1.00144.50 N \ ATOM 138 CA TRP 19 -2.739 -0.323 8.829 1.00144.50 C \ ATOM 139 CB TRP 19 -4.103 0.378 8.980 1.00144.50 C \ ATOM 140 CG TRP 19 -5.278 -0.539 9.248 1.00144.50 C \ ATOM 141 CD2 TRP 19 -6.514 -0.119 9.848 1.00144.50 C \ ATOM 142 CD1 TRP 19 -5.408 -1.871 8.997 1.00144.50 C \ ATOM 143 NE1 TRP 19 -6.645 -2.311 9.402 1.00144.50 N \ ATOM 144 CE2 TRP 19 -7.336 -1.241 9.930 1.00144.50 C \ ATOM 145 CE3 TRP 19 -6.930 1.103 10.297 1.00144.50 C \ ATOM 146 CZ2 TRP 19 -8.593 -1.163 10.461 1.00144.50 C \ ATOM 147 CZ3 TRP 19 -8.197 1.179 10.833 1.00144.50 C \ ATOM 148 CH2 TRP 19 -9.011 0.069 10.915 1.00144.50 C \ ATOM 149 C TRP 19 -2.380 -0.922 10.149 1.00144.50 C \ ATOM 150 O TRP 19 -1.509 -0.401 10.846 1.00144.50 O \ ATOM 151 N GLN 20 -3.038 -2.036 10.516 1.00250.94 N \ ATOM 152 CA GLN 20 -2.781 -2.719 11.750 1.00250.94 C \ ATOM 153 CB GLN 20 -1.430 -3.469 11.807 1.00250.94 C \ ATOM 154 CG GLN 20 -0.175 -2.593 11.803 1.00250.94 C \ ATOM 155 CD GLN 20 1.042 -3.512 11.864 1.00250.94 C \ ATOM 156 OE1 GLN 20 0.964 -4.705 11.571 1.00250.94 O \ ATOM 157 NE2 GLN 20 2.210 -2.934 12.254 1.00250.94 N \ ATOM 158 C GLN 20 -2.849 -1.712 12.846 1.00250.94 C \ ATOM 159 O GLN 20 -2.098 -1.781 13.820 1.00250.94 O \ ATOM 160 N LYS 21 -3.767 -0.742 12.714 1.00 67.11 N \ ATOM 161 CA LYS 21 -3.929 0.245 13.737 1.00 67.11 C \ ATOM 162 CB LYS 21 -4.008 1.686 13.199 1.00 67.11 C \ ATOM 163 CG LYS 21 -2.667 2.235 12.699 1.00 67.11 C \ ATOM 164 CD LYS 21 -2.794 3.539 11.906 1.00 67.11 C \ ATOM 165 CE LYS 21 -1.454 4.194 11.555 1.00 67.11 C \ ATOM 166 NZ LYS 21 -0.838 4.772 12.772 1.00 67.11 N \ ATOM 167 C LYS 21 -5.259 -0.066 14.409 1.00 67.11 C \ ATOM 168 O LYS 21 -5.940 -1.023 13.954 1.00 67.11 O \ ATOM 169 OXT LYS 21 -5.610 0.651 15.384 1.00 67.11 O \ TER 170 LYS 21 \ END \ \ ""","model_1") cmd.show_as("cartoon" ,"model_1") cmd.spectrum(expression="count",selection="model_1_aln",byres=2)