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cmd.read_pdbstr(""""\
HEADER SCOP/ASTRAL domain d1rutx3 [111941] 02-JUN-09 0000 \
REMARK 99 \
REMARK 99 ASTRAL ASTRAL-version: 1.75 \
REMARK 99 ASTRAL SCOP-sid: d1rutx3 \
REMARK 99 ASTRAL SCOP-sun: 111941 \
REMARK 99 ASTRAL SCOP-sccs: g.39.1.3 \
REMARK 99 ASTRAL Source-PDB: 1rut \
REMARK 99 ASTRAL Source-PDB-REVDAT: 12-OCT-04 \
REMARK 99 ASTRAL Region: x:83-113 \
REMARK 99 ASTRAL ASTRAL-SPACI: 0.89 \
REMARK 99 ASTRAL ASTRAL-AEROSPACI: 0.89 \
REMARK 99 ASTRAL Data-updated-release: 1.71 \
ATOM 517 N ASN X 83 -18.590 14.806 23.988 1.00 24.95 N \
ATOM 518 CA ASN X 83 -19.184 14.355 22.739 1.00 26.24 C \
ATOM 519 C ASN X 83 -18.137 13.751 21.819 1.00 24.51 C \
ATOM 520 O ASN X 83 -17.323 14.457 21.233 1.00 29.77 O \
ATOM 521 CB ASN X 83 -19.897 15.517 22.042 1.00 31.06 C \
ATOM 522 CG ASN X 83 -21.117 16.001 22.808 1.00 36.49 C \
ATOM 523 OD1 ASN X 83 -21.810 15.217 23.461 1.00 39.60 O \
ATOM 524 ND2 ASN X 83 -21.390 17.298 22.726 1.00 43.10 N \
ATOM 525 N SER X 84 -18.131 12.427 21.750 1.00 25.91 N \
ATOM 526 CA SER X 84 -17.350 11.724 20.750 1.00 26.50 C \
ATOM 527 C SER X 84 -18.109 11.800 19.436 1.00 24.26 C \
ATOM 528 O SER X 84 -19.291 12.149 19.397 1.00 28.48 O \
ATOM 529 CB SER X 84 -17.126 10.269 21.165 1.00 28.89 C \
ATOM 530 OG SER X 84 -18.353 9.576 21.283 1.00 34.55 O \
ATOM 531 N GLY X 85 -17.404 11.500 18.357 1.00 24.82 N \
ATOM 532 CA GLY X 85 -17.994 11.507 17.035 1.00 24.28 C \
ATOM 533 C GLY X 85 -17.542 10.311 16.238 1.00 24.70 C \
ATOM 534 O GLY X 85 -17.168 9.284 16.782 1.00 25.34 O \
ATOM 535 N ALA X 86 -17.581 10.456 14.925 1.00 24.50 N \
ATOM 536 CA ALA X 86 -17.193 9.380 14.032 1.00 25.29 C \
ATOM 537 C ALA X 86 -16.700 9.984 12.736 1.00 23.14 C \
ATOM 538 O ALA X 86 -17.207 11.008 12.294 1.00 24.68 O \
ATOM 539 CB ALA X 86 -18.362 8.441 13.783 1.00 28.02 C \
ATOM 540 N CYS X 87 -15.695 9.343 12.158 1.00 22.47 N \
ATOM 541 CA CYS X 87 -15.052 9.807 10.940 1.00 21.06 C \
ATOM 542 C CYS X 87 -15.909 9.473 9.734 1.00 20.74 C \
ATOM 543 O CYS X 87 -16.263 8.320 9.520 1.00 22.79 O \
ATOM 544 CB CYS X 87 -13.700 9.127 10.795 1.00 20.78 C \
ATOM 545 SG CYS X 87 -12.747 9.639 9.374 1.00 21.94 S \
ATOM 546 N SER X 88 -16.237 10.477 8.930 1.00 21.79 N \
ATOM 547 CA SER X 88 -17.050 10.241 7.737 1.00 23.33 C \
ATOM 548 C SER X 88 -16.322 9.441 6.661 1.00 25.08 C \
ATOM 549 O SER X 88 -16.966 8.869 5.783 1.00 26.75 O \
ATOM 550 CB SER X 88 -17.541 11.564 7.152 1.00 22.57 C \
ATOM 551 OG SER X 88 -18.635 12.062 7.899 1.00 25.45 O \
ATOM 552 N ALA X 89 -14.992 9.420 6.708 1.00 22.13 N \
ATOM 553 CA ALA X 89 -14.210 8.669 5.732 1.00 23.43 C \
ATOM 554 C ALA X 89 -14.149 7.192 6.086 1.00 25.49 C \
ATOM 555 O ALA X 89 -14.552 6.363 5.285 1.00 33.01 O \
ATOM 556 CB ALA X 89 -12.812 9.242 5.603 1.00 23.41 C \
ATOM 557 N CYS X 90 -13.673 6.862 7.285 1.00 23.73 N \
ATOM 558 CA CYS X 90 -13.438 5.464 7.653 1.00 24.49 C \
ATOM 559 C CYS X 90 -14.521 4.844 8.537 1.00 25.09 C \
ATOM 560 O CYS X 90 -14.492 3.639 8.775 1.00 26.42 O \
ATOM 561 CB CYS X 90 -12.080 5.300 8.329 1.00 24.92 C \
ATOM 562 SG CYS X 90 -12.005 5.974 10.001 1.00 24.59 S \
ATOM 563 N GLY X 91 -15.451 5.665 9.019 1.00 23.56 N \
ATOM 564 CA GLY X 91 -16.572 5.214 9.829 1.00 24.26 C \
ATOM 565 C GLY X 91 -16.284 4.977 11.300 1.00 26.62 C \
ATOM 566 O GLY X 91 -17.207 4.721 12.076 1.00 29.94 O \
ATOM 567 N GLN X 92 -15.017 5.054 11.693 1.00 24.68 N \
ATOM 568 CA GLN X 92 -14.621 4.666 13.045 1.00 25.21 C \
ATOM 569 C GLN X 92 -14.788 5.815 14.037 1.00 26.64 C \
ATOM 570 O GLN X 92 -14.722 6.992 13.679 1.00 27.18 O \
ATOM 571 CB AGLN X 92 -13.167 4.181 13.060 0.50 27.87 C \
ATOM 572 CB BGLN X 92 -13.183 4.135 13.065 0.50 29.03 C \
ATOM 573 CG AGLN X 92 -12.873 3.031 12.106 0.50 27.80 C \
ATOM 574 CG BGLN X 92 -12.997 2.804 12.330 0.50 30.10 C \
ATOM 575 CD AGLN X 92 -11.464 2.488 12.259 0.50 29.84 C \
ATOM 576 CD BGLN X 92 -13.597 1.619 13.081 0.50 29.25 C \
ATOM 577 OE1AGLN X 92 -11.245 1.510 12.974 0.01 27.04 O \
ATOM 578 OE1BGLN X 92 -12.933 1.011 13.921 0.01 27.86 O \
ATOM 579 NE2AGLN X 92 -10.508 3.121 11.590 0.01 27.54 N \
ATOM 580 NE2BGLN X 92 -14.848 1.293 12.777 0.01 27.69 N \
ATOM 581 N SER X 93 -15.003 5.458 15.298 1.00 30.21 N \
ATOM 582 CA SER X 93 -15.207 6.448 16.353 1.00 28.38 C \
ATOM 583 C SER X 93 -14.009 7.393 16.521 1.00 27.72 C \
ATOM 584 O SER X 93 -12.863 7.027 16.255 1.00 30.60 O \
ATOM 585 CB SER X 93 -15.515 5.745 17.680 1.00 33.21 C \
ATOM 586 OG SER X 93 -14.473 4.854 18.031 1.00 39.44 O \
ATOM 587 N ILE X 94 -14.305 8.620 16.938 1.00 25.93 N \
ATOM 588 CA ILE X 94 -13.293 9.622 17.262 1.00 25.88 C \
ATOM 589 C ILE X 94 -13.558 10.075 18.693 1.00 24.94 C \
ATOM 590 O ILE X 94 -14.630 10.601 18.969 1.00 26.50 O \
ATOM 591 CB ILE X 94 -13.382 10.841 16.326 1.00 24.35 C \
ATOM 592 CG1 ILE X 94 -13.261 10.425 14.855 1.00 25.06 C \
ATOM 593 CG2 ILE X 94 -12.289 11.861 16.684 1.00 25.20 C \
ATOM 594 CD1 ILE X 94 -13.553 11.553 13.886 1.00 26.68 C \
ATOM 595 N PRO X 95 -12.614 9.874 19.608 1.00 25.82 N \
ATOM 596 CA PRO X 95 -12.792 10.356 20.984 1.00 25.09 C \
ATOM 597 C PRO X 95 -12.977 11.870 21.034 1.00 23.76 C \
ATOM 598 O PRO X 95 -12.417 12.577 20.199 1.00 23.51 O \
ATOM 599 CB PRO X 95 -11.479 9.964 21.676 1.00 29.78 C \
ATOM 600 CG PRO X 95 -10.860 8.936 20.825 1.00 28.38 C \
ATOM 601 CD PRO X 95 -11.339 9.164 19.432 1.00 26.64 C \
ATOM 602 N ALA X 96 -13.734 12.350 22.023 1.00 24.18 N \
ATOM 603 CA ALA X 96 -13.903 13.786 22.272 1.00 23.95 C \
ATOM 604 C ALA X 96 -12.574 14.551 22.382 1.00 23.71 C \
ATOM 605 O ALA X 96 -12.507 15.728 22.050 1.00 25.35 O \
ATOM 606 CB ALA X 96 -14.736 14.010 23.544 1.00 24.69 C \
ATOM 607 N SER X 97 -11.527 13.878 22.851 1.00 24.24 N \
ATOM 608 CA SER X 97 -10.219 14.508 23.049 1.00 25.47 C \
ATOM 609 C SER X 97 -9.391 14.698 21.778 1.00 25.68 C \
ATOM 610 O SER X 97 -8.373 15.384 21.804 1.00 27.77 O \
ATOM 611 CB SER X 97 -9.396 13.680 24.033 1.00 25.95 C \
ATOM 612 OG SER X 97 -9.165 12.375 23.528 1.00 28.94 O \
ATOM 613 N GLU X 98 -9.817 14.096 20.671 1.00 24.49 N \
ATOM 614 CA GLU X 98 -8.990 14.059 19.471 1.00 24.35 C \
ATOM 615 C GLU X 98 -9.261 15.255 18.561 1.00 24.25 C \
ATOM 616 O GLU X 98 -10.405 15.650 18.381 1.00 25.41 O \
ATOM 617 CB GLU X 98 -9.214 12.744 18.721 1.00 24.05 C \
ATOM 618 CG GLU X 98 -8.288 12.554 17.531 1.00 25.22 C \
ATOM 619 CD GLU X 98 -8.335 11.161 16.937 1.00 26.94 C \
ATOM 620 OE1 GLU X 98 -8.661 10.198 17.653 1.00 28.41 O \
ATOM 621 OE2 GLU X 98 -8.045 11.030 15.733 1.00 27.30 O \
ATOM 622 N LEU X 99 -8.203 15.828 17.989 1.00 25.54 N \
ATOM 623 CA LEU X 99 -8.347 16.872 16.976 1.00 25.61 C \
ATOM 624 C LEU X 99 -8.888 16.253 15.692 1.00 24.67 C \
ATOM 625 O LEU X 99 -8.514 15.146 15.325 1.00 27.79 O \
ATOM 626 CB LEU X 99 -7.011 17.560 16.687 1.00 26.06 C \
ATOM 627 CG LEU X 99 -6.489 18.497 17.775 1.00 27.61 C \
ATOM 628 CD1 LEU X 99 -5.046 18.880 17.493 1.00 32.35 C \
ATOM 629 CD2 LEU X 99 -7.355 19.730 17.891 1.00 28.32 C \
ATOM 630 N VAL X 100 -9.790 16.970 15.040 1.00 23.98 N \
ATOM 631 CA VAL X 100 -10.396 16.521 13.793 1.00 22.76 C \
ATOM 632 C VAL X 100 -10.372 17.612 12.738 1.00 23.01 C \
ATOM 633 O VAL X 100 -10.251 18.792 13.045 1.00 25.43 O \
ATOM 634 CB VAL X 100 -11.868 16.066 13.998 1.00 25.69 C \
ATOM 635 CG1 VAL X 100 -11.931 14.880 14.918 1.00 25.59 C \
ATOM 636 CG2 VAL X 100 -12.754 17.206 14.517 1.00 24.87 C \
ATOM 637 N MET X 101 -10.477 17.192 11.487 1.00 20.79 N \
ATOM 638 CA MET X 101 -10.675 18.097 10.371 1.00 21.59 C \
ATOM 639 C MET X 101 -12.152 18.106 10.029 1.00 23.42 C \
ATOM 640 O MET X 101 -12.873 17.138 10.300 1.00 22.78 O \
ATOM 641 CB MET X 101 -9.845 17.656 9.170 1.00 23.22 C \
ATOM 642 CG MET X 101 -8.354 17.506 9.452 1.00 23.96 C \
ATOM 643 SD MET X 101 -7.540 19.012 10.005 1.00 28.14 S \
ATOM 644 CE MET X 101 -7.406 19.866 8.511 1.00 31.17 C \
ATOM 645 N ARG X 102 -12.590 19.205 9.429 1.00 26.99 N \
ATOM 646 CA ARG X 102 -13.992 19.418 9.113 1.00 29.86 C \
ATOM 647 C ARG X 102 -14.180 19.746 7.642 1.00 32.62 C \
ATOM 648 O ARG X 102 -13.353 20.413 7.015 1.00 32.27 O \
ATOM 649 CB ARG X 102 -14.556 20.553 9.963 1.00 33.82 C \
ATOM 650 CG ARG X 102 -14.750 20.184 11.418 1.00 32.77 C \
ATOM 651 CD ARG X 102 -15.192 21.337 12.298 1.00 36.46 C \
ATOM 652 NE ARG X 102 -15.843 20.879 13.525 0.01 33.71 N \
ATOM 653 CZ ARG X 102 -16.376 21.680 14.447 0.01 32.31 C \
ATOM 654 NH1 ARG X 102 -16.343 23.002 14.300 0.01 31.85 N \
ATOM 655 NH2 ARG X 102 -16.945 21.156 15.527 0.01 31.95 N \
ATOM 656 N ALA X 103 -15.282 19.257 7.099 1.00 28.52 N \
ATOM 657 CA ALA X 103 -15.735 19.650 5.777 1.00 27.20 C \
ATOM 658 C ALA X 103 -17.204 19.297 5.663 1.00 24.69 C \
ATOM 659 O ALA X 103 -17.612 18.182 5.981 1.00 25.65 O \
ATOM 660 CB ALA X 103 -14.936 18.946 4.694 1.00 31.46 C \
ATOM 661 N GLN X 104 -17.989 20.277 5.245 1.00 25.51 N \
ATOM 662 CA GLN X 104 -19.380 20.086 4.859 1.00 28.45 C \
ATOM 663 C GLN X 104 -20.215 19.351 5.906 1.00 28.90 C \
ATOM 664 O GLN X 104 -21.029 18.488 5.570 1.00 33.49 O \
ATOM 665 CB GLN X 104 -19.442 19.380 3.502 1.00 36.82 C \
ATOM 666 CG GLN X 104 -18.772 20.177 2.385 1.00 38.24 C \
ATOM 667 CD GLN X 104 -19.642 21.298 1.856 1.00 41.50 C \
ATOM 668 OE1 GLN X 104 -20.763 21.060 1.403 1.00 45.26 O \
ATOM 669 NE2 GLN X 104 -19.133 22.522 1.912 1.00 43.75 N \
ATOM 670 N GLY X 105 -19.998 19.702 7.172 1.00 28.05 N \
ATOM 671 CA GLY X 105 -20.782 19.163 8.272 1.00 30.26 C \
ATOM 672 C GLY X 105 -20.315 17.815 8.793 1.00 30.84 C \
ATOM 673 O GLY X 105 -20.928 17.250 9.699 1.00 34.96 O \
ATOM 674 N ASN X 106 -19.228 17.309 8.218 1.00 26.48 N \
ATOM 675 CA ASN X 106 -18.619 16.045 8.598 1.00 27.25 C \
ATOM 676 C ASN X 106 -17.341 16.295 9.376 1.00 24.71 C \
ATOM 677 O ASN X 106 -16.745 17.370 9.279 1.00 26.78 O \
ATOM 678 CB ASN X 106 -18.275 15.235 7.353 1.00 27.59 C \
ATOM 679 CG ASN X 106 -19.486 14.950 6.490 1.00 30.21 C \
ATOM 680 OD1 ASN X 106 -20.605 14.858 6.987 1.00 31.57 O \
ATOM 681 ND2 ASN X 106 -19.264 14.812 5.190 1.00 37.06 N \
ATOM 682 N VAL X 107 -16.927 15.292 10.139 1.00 23.64 N \
ATOM 683 CA VAL X 107 -15.635 15.312 10.815 1.00 23.76 C \
ATOM 684 C VAL X 107 -14.780 14.132 10.345 1.00 21.01 C \
ATOM 685 O VAL X 107 -15.293 13.089 9.945 1.00 21.02 O \
ATOM 686 CB VAL X 107 -15.770 15.349 12.356 1.00 29.38 C \
ATOM 687 CG1 VAL X 107 -16.438 16.649 12.791 1.00 30.49 C \
ATOM 688 CG2 VAL X 107 -16.543 14.153 12.881 1.00 28.43 C \
ATOM 689 N TYR X 108 -13.466 14.326 10.379 1.00 19.74 N \
ATOM 690 CA TYR X 108 -12.505 13.356 9.864 1.00 19.25 C \
ATOM 691 C TYR X 108 -11.305 13.235 10.789 1.00 20.65 C \
ATOM 692 O TYR X 108 -10.829 14.238 11.318 1.00 21.73 O \
ATOM 693 CB TYR X 108 -11.982 13.801 8.500 1.00 19.66 C \
ATOM 694 CG TYR X 108 -13.054 13.953 7.455 1.00 20.68 C \
ATOM 695 CD1 TYR X 108 -13.744 15.153 7.307 1.00 22.37 C \
ATOM 696 CD2 TYR X 108 -13.390 12.892 6.624 1.00 21.38 C \
ATOM 697 CE1 TYR X 108 -14.736 15.294 6.360 1.00 22.80 C \
ATOM 698 CE2 TYR X 108 -14.378 13.023 5.666 1.00 23.75 C \
ATOM 699 CZ TYR X 108 -15.047 14.229 5.545 1.00 22.39 C \
ATOM 700 OH TYR X 108 -16.036 14.379 4.611 1.00 26.04 O \
ATOM 701 N HIS X 109 -10.793 12.018 10.960 1.00 20.87 N \
ATOM 702 CA HIS X 109 -9.423 11.833 11.445 1.00 20.26 C \
ATOM 703 C HIS X 109 -8.496 12.650 10.553 1.00 20.81 C \
ATOM 704 O HIS X 109 -8.702 12.721 9.342 1.00 21.09 O \
ATOM 705 CB HIS X 109 -8.972 10.377 11.362 1.00 21.21 C \
ATOM 706 CG HIS X 109 -9.720 9.441 12.256 1.00 22.19 C \
ATOM 707 ND1 HIS X 109 -10.555 8.459 11.768 1.00 23.11 N \
ATOM 708 CD2 HIS X 109 -9.723 9.304 13.602 1.00 25.56 C \
ATOM 709 CE1 HIS X 109 -11.055 7.771 12.779 1.00 26.02 C \
ATOM 710 NE2 HIS X 109 -10.569 8.266 13.904 1.00 26.34 N \
ATOM 711 N LEU X 110 -7.456 13.242 11.135 1.00 21.67 N \
ATOM 712 CA LEU X 110 -6.500 14.004 10.338 1.00 21.20 C \
ATOM 713 C LEU X 110 -5.951 13.180 9.176 1.00 21.30 C \
ATOM 714 O LEU X 110 -5.860 13.675 8.051 1.00 23.17 O \
ATOM 715 CB LEU X 110 -5.343 14.537 11.192 1.00 23.91 C \
ATOM 716 CG LEU X 110 -5.540 15.965 11.693 1.00 27.54 C \
ATOM 717 CD1 LEU X 110 -6.770 16.066 12.544 1.00 28.34 C \
ATOM 718 CD2 LEU X 110 -4.323 16.443 12.470 1.00 28.36 C \
ATOM 719 N LYS X 111 -5.604 11.924 9.429 1.00 22.76 N \
ATOM 720 CA LYS X 111 -4.970 11.096 8.405 1.00 23.84 C \
ATOM 721 C LYS X 111 -5.978 10.517 7.400 1.00 22.22 C \
ATOM 722 O LYS X 111 -5.577 9.969 6.373 1.00 23.54 O \
ATOM 723 CB LYS X 111 -4.107 10.003 9.046 1.00 25.95 C \
ATOM 724 CG LYS X 111 -2.866 10.565 9.733 1.00 31.14 C \
ATOM 725 CD LYS X 111 -1.950 9.476 10.271 1.00 34.63 C \
ATOM 726 CE LYS X 111 -0.754 10.073 11.002 1.00 35.50 C \
ATOM 727 NZ LYS X 111 0.179 9.024 11.499 0.01 32.72 N \
ATOM 728 N CYS X 112 -7.274 10.659 7.685 1.00 21.18 N \
ATOM 729 CA CYS X 112 -8.342 10.287 6.745 1.00 21.64 C \
ATOM 730 C CYS X 112 -8.779 11.452 5.849 1.00 20.93 C \
ATOM 731 O CYS X 112 -9.556 11.274 4.908 1.00 21.51 O \
ATOM 732 CB CYS X 112 -9.563 9.788 7.509 1.00 21.47 C \
ATOM 733 SG CYS X 112 -9.319 8.213 8.322 1.00 24.50 S \
ATOM 734 N PHE X 113 -8.287 12.645 6.143 1.00 20.12 N \
ATOM 735 CA PHE X 113 -8.690 13.849 5.429 1.00 19.02 C \
ATOM 736 C PHE X 113 -7.757 14.014 4.239 1.00 18.87 C \
ATOM 737 O PHE X 113 -6.828 14.820 4.263 1.00 19.88 O \
ATOM 738 CB PHE X 113 -8.638 15.048 6.387 1.00 19.90 C \
ATOM 739 CG PHE X 113 -9.397 16.253 5.917 1.00 18.89 C \
ATOM 740 CD1 PHE X 113 -10.777 16.227 5.788 1.00 19.36 C \
ATOM 741 CD2 PHE X 113 -8.727 17.423 5.608 1.00 19.87 C \
ATOM 742 CE1 PHE X 113 -11.466 17.349 5.361 1.00 22.37 C \
ATOM 743 CE2 PHE X 113 -9.408 18.541 5.187 1.00 20.15 C \
ATOM 744 CZ PHE X 113 -10.782 18.507 5.061 1.00 20.58 C \
TER 745 PHE X 113 \
END \
\
""","d1rutx3")
cmd.color("white" ,"d1rutx3")
cmd.zoom("d1rutx3", animate=-1)
cmd.orient(selection="d1rutx3", state=0, animate=0)
cmd.select("d1rutx3_aln","resi 85-113")
cmd.spectrum(expression="count",selection="d1rutx3_aln",byres=2)
cmd.disable("d1rutx3_aln")
cmd.show_as("cartoon" ,"d1rutx3")