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cmd.read_pdbstr(""""\ ATOM 1 N PRO A 1 3.428 3.102 7.948 1.00 16.95 N \ ATOM 2 CA PRO A 1 4.715 3.664 8.503 1.00 15.29 C \ ATOM 3 C PRO A 1 5.886 2.836 7.969 1.00 14.56 C \ ATOM 4 O PRO A 1 5.795 1.600 7.935 1.00 13.83 O \ ATOM 5 CB PRO A 1 4.652 3.583 10.039 1.00 16.95 C \ ATOM 6 CG PRO A 1 3.594 2.547 10.288 1.00 17.45 C \ ATOM 7 CD PRO A 1 2.613 2.732 9.143 1.00 17.30 C \ HETATM 8 N HYP A 2 6.974 3.502 7.510 1.00 14.00 N \ HETATM 9 CA HYP A 2 8.249 2.952 6.959 1.00 12.62 C \ HETATM 10 C HYP A 2 9.010 2.006 7.895 1.00 10.74 C \ HETATM 11 O HYP A 2 9.102 2.240 9.092 1.00 8.02 O \ HETATM 12 CB HYP A 2 9.123 4.184 6.623 1.00 14.03 C \ HETATM 13 CG HYP A 2 8.265 5.440 6.841 1.00 15.60 C \ HETATM 14 CD HYP A 2 6.933 4.975 7.442 1.00 14.31 C \ HETATM 15 OD1 HYP A 2 8.053 6.085 5.577 1.00 14.55 O \ ATOM 16 N GLY A 3 9.564 0.954 7.322 1.00 10.73 N \ ATOM 17 CA GLY A 3 10.271 -0.010 8.133 1.00 10.54 C \ ATOM 18 C GLY A 3 11.582 0.516 8.692 1.00 11.02 C \ ATOM 19 O GLY A 3 11.982 1.659 8.429 1.00 11.19 O \ ATOM 20 N PRO A 4 12.280 -0.325 9.480 1.00 11.25 N \ ATOM 21 CA PRO A 4 13.552 -0.116 10.171 1.00 9.62 C \ ATOM 22 C PRO A 4 14.676 0.304 9.243 1.00 8.00 C \ ATOM 23 O PRO A 4 14.585 0.106 7.992 1.00 7.96 O \ ATOM 24 CB PRO A 4 13.835 -1.469 10.835 1.00 11.40 C \ ATOM 25 CG PRO A 4 12.513 -2.168 10.903 1.00 10.87 C \ ATOM 26 CD PRO A 4 11.810 -1.716 9.656 1.00 13.38 C \ HETATM 27 N HYP A 5 15.739 0.908 9.828 1.00 7.30 N \ HETATM 28 CA HYP A 5 16.933 1.352 9.091 1.00 6.38 C \ HETATM 29 C HYP A 5 17.547 0.117 8.478 1.00 6.56 C \ HETATM 30 O HYP A 5 17.377 -0.977 9.039 1.00 5.30 O \ HETATM 31 CB HYP A 5 17.835 1.911 10.152 1.00 6.21 C \ HETATM 32 CG HYP A 5 16.916 2.371 11.262 1.00 7.98 C \ HETATM 33 CD HYP A 5 15.852 1.277 11.250 1.00 7.71 C \ HETATM 34 OD1 HYP A 5 16.402 3.665 10.876 1.00 5.17 O \ ATOM 35 N GLY A 6 18.234 0.317 7.354 1.00 5.25 N \ ATOM 36 CA GLY A 6 18.913 -0.751 6.650 1.00 5.03 C \ ATOM 37 C GLY A 6 20.150 -1.222 7.360 1.00 4.13 C \ ATOM 38 O GLY A 6 20.646 -0.519 8.238 1.00 3.87 O \ ATOM 39 N PRO A 7 20.711 -2.382 6.997 1.00 3.51 N \ ATOM 40 CA PRO A 7 21.896 -2.781 7.768 1.00 2.99 C \ ATOM 41 C PRO A 7 23.163 -1.933 7.524 1.00 3.09 C \ ATOM 42 O PRO A 7 23.164 -1.012 6.637 1.00 2.00 O \ ATOM 43 CB PRO A 7 22.040 -4.256 7.431 1.00 2.00 C \ ATOM 44 CG PRO A 7 21.601 -4.267 6.010 1.00 3.84 C \ ATOM 45 CD PRO A 7 20.396 -3.370 5.956 1.00 2.78 C \ HETATM 46 N HYP A 8 24.238 -2.167 8.350 1.00 2.00 N \ HETATM 47 CA HYP A 8 25.478 -1.405 8.199 1.00 2.00 C \ HETATM 48 C HYP A 8 25.977 -1.646 6.824 1.00 2.57 C \ HETATM 49 O HYP A 8 25.766 -2.769 6.319 1.00 2.97 O \ HETATM 50 CB HYP A 8 26.410 -1.977 9.264 1.00 2.00 C \ HETATM 51 CG HYP A 8 25.457 -2.459 10.355 1.00 3.41 C \ HETATM 52 CD HYP A 8 24.329 -3.066 9.517 1.00 2.93 C \ HETATM 53 OD1 HYP A 8 24.950 -1.358 11.145 1.00 2.00 O \ ATOM 54 N GLY A 9 26.610 -0.623 6.232 1.00 2.35 N \ ATOM 55 CA GLY A 9 27.177 -0.755 4.904 1.00 2.57 C \ ATOM 56 C GLY A 9 28.451 -1.608 4.973 1.00 2.27 C \ ATOM 57 O GLY A 9 28.943 -1.945 6.056 1.00 3.92 O \ ATOM 58 N PRO A 10 29.016 -1.986 3.835 1.00 3.65 N \ ATOM 59 CA PRO A 10 30.236 -2.795 3.926 1.00 2.88 C \ ATOM 60 C PRO A 10 31.520 -2.105 4.375 1.00 2.24 C \ ATOM 61 O PRO A 10 31.628 -0.876 4.407 1.00 2.00 O \ ATOM 62 CB PRO A 10 30.379 -3.356 2.527 1.00 3.93 C \ ATOM 63 CG PRO A 10 29.860 -2.220 1.694 1.00 2.00 C \ ATOM 64 CD PRO A 10 28.629 -1.767 2.433 1.00 2.00 C \ HETATM 65 N HYP A 11 32.505 -2.923 4.762 1.00 2.69 N \ HETATM 66 CA HYP A 11 33.836 -2.455 5.125 1.00 3.02 C \ HETATM 67 C HYP A 11 34.320 -1.266 4.266 1.00 3.61 C \ HETATM 68 O HYP A 11 34.039 -1.180 3.072 1.00 2.70 O \ HETATM 69 CB HYP A 11 34.698 -3.680 4.875 1.00 3.23 C \ HETATM 70 CG HYP A 11 33.823 -4.855 5.291 1.00 3.94 C \ HETATM 71 CD HYP A 11 32.398 -4.378 4.970 1.00 2.67 C \ HETATM 72 OD1 HYP A 11 34.036 -5.064 6.712 1.00 4.43 O \ ATOM 73 N GLY A 12 35.059 -0.373 4.881 1.00 3.78 N \ ATOM 74 CA GLY A 12 35.666 0.667 4.102 1.00 3.04 C \ ATOM 75 C GLY A 12 36.817 0.200 3.245 1.00 3.34 C \ ATOM 76 O GLY A 12 37.225 -0.981 3.177 1.00 2.33 O \ ATOM 77 N PRO A 13 37.415 1.171 2.570 1.00 3.87 N \ ATOM 78 CA PRO A 13 38.548 0.929 1.682 1.00 3.59 C \ ATOM 79 C PRO A 13 39.733 0.355 2.444 1.00 3.51 C \ ATOM 80 O PRO A 13 39.941 0.672 3.619 1.00 5.17 O \ ATOM 81 CB PRO A 13 38.845 2.300 1.101 1.00 3.94 C \ ATOM 82 CG PRO A 13 37.638 3.114 1.420 1.00 4.41 C \ ATOM 83 CD PRO A 13 37.103 2.594 2.685 1.00 3.69 C \ HETATM 84 N HYP A 14 40.499 -0.542 1.815 1.00 3.60 N \ HETATM 85 CA HYP A 14 41.696 -1.093 2.499 1.00 3.31 C \ HETATM 86 C HYP A 14 42.601 0.019 3.054 1.00 2.64 C \ HETATM 87 O HYP A 14 42.922 0.998 2.392 1.00 2.59 O \ HETATM 88 CB HYP A 14 42.333 -1.959 1.420 1.00 2.36 C \ HETATM 89 CG HYP A 14 41.139 -2.450 0.601 1.00 3.18 C \ HETATM 90 CD HYP A 14 40.251 -1.234 0.548 1.00 2.16 C \ HETATM 91 OD1 HYP A 14 40.406 -3.516 1.247 1.00 2.00 O \ ATOM 92 N ALA A 15 42.959 -0.146 4.323 1.00 4.45 N \ ATOM 93 CA ALA A 15 43.846 0.766 5.067 1.00 3.96 C \ ATOM 94 C ALA A 15 45.177 0.736 4.288 1.00 4.87 C \ ATOM 95 O ALA A 15 45.732 -0.345 4.003 1.00 5.69 O \ ATOM 96 CB ALA A 15 44.028 0.225 6.439 1.00 3.31 C \ ATOM 97 N PRO A 16 45.742 1.905 3.975 1.00 5.09 N \ ATOM 98 CA PRO A 16 46.952 1.810 3.168 1.00 4.34 C \ ATOM 99 C PRO A 16 48.127 1.127 3.835 1.00 3.31 C \ ATOM 100 O PRO A 16 48.085 0.829 5.008 1.00 4.75 O \ ATOM 101 CB PRO A 16 47.215 3.283 2.763 1.00 2.98 C \ ATOM 102 CG PRO A 16 46.705 4.037 3.924 1.00 3.99 C \ ATOM 103 CD PRO A 16 45.466 3.299 4.382 1.00 4.07 C \ HETATM 104 N HYP A 17 49.179 0.815 3.068 1.00 2.00 N \ HETATM 105 CA HYP A 17 50.392 0.205 3.635 1.00 2.32 C \ HETATM 106 C HYP A 17 51.099 1.270 4.448 1.00 2.40 C \ HETATM 107 O HYP A 17 50.872 2.475 4.220 1.00 3.81 O \ HETATM 108 CB HYP A 17 51.210 -0.220 2.438 1.00 2.45 C \ HETATM 109 CG HYP A 17 50.309 -0.040 1.213 1.00 3.90 C \ HETATM 110 CD HYP A 17 49.246 0.964 1.615 1.00 2.11 C \ HETATM 111 OD1 HYP A 17 49.678 -1.284 0.863 1.00 3.97 O \ ATOM 112 N GLY A 18 51.942 0.875 5.392 1.00 2.00 N \ ATOM 113 CA GLY A 18 52.609 1.900 6.166 1.00 3.72 C \ ATOM 114 C GLY A 18 53.699 2.759 5.522 1.00 2.95 C \ ATOM 115 O GLY A 18 54.052 2.619 4.311 1.00 2.00 O \ ATOM 116 N PRO A 19 54.241 3.694 6.334 1.00 2.40 N \ ATOM 117 CA PRO A 19 55.322 4.546 5.856 1.00 2.22 C \ ATOM 118 C PRO A 19 56.592 3.649 5.716 1.00 2.48 C \ ATOM 119 O PRO A 19 56.681 2.554 6.315 1.00 2.00 O \ ATOM 120 CB PRO A 19 55.460 5.627 6.918 1.00 2.00 C \ ATOM 121 CG PRO A 19 54.381 5.393 7.939 1.00 3.19 C \ ATOM 122 CD PRO A 19 53.851 4.002 7.725 1.00 2.95 C \ HETATM 123 N HYP A 20 57.567 4.073 4.884 1.00 3.22 N \ HETATM 124 CA HYP A 20 58.779 3.269 4.704 1.00 2.27 C \ HETATM 125 C HYP A 20 59.443 3.027 6.090 1.00 4.26 C \ HETATM 126 O HYP A 20 59.217 3.797 7.032 1.00 2.00 O \ HETATM 127 CB HYP A 20 59.645 4.132 3.832 1.00 3.64 C \ HETATM 128 CG HYP A 20 58.678 5.056 3.111 1.00 2.00 C \ HETATM 129 CD HYP A 20 57.653 5.355 4.167 1.00 2.40 C \ HETATM 130 OD1 HYP A 20 58.034 4.386 2.068 1.00 4.54 O \ ATOM 131 N GLY A 21 60.250 1.970 6.184 1.00 4.75 N \ ATOM 132 CA GLY A 21 60.989 1.757 7.390 1.00 4.78 C \ ATOM 133 C GLY A 21 62.102 2.778 7.516 1.00 5.37 C \ ATOM 134 O GLY A 21 62.267 3.675 6.681 1.00 6.31 O \ ATOM 135 N PRO A 22 62.937 2.626 8.547 1.00 6.25 N \ ATOM 136 CA PRO A 22 64.051 3.535 8.788 1.00 5.54 C \ ATOM 137 C PRO A 22 65.268 3.105 7.981 1.00 5.56 C \ ATOM 138 O PRO A 22 65.297 2.016 7.394 1.00 4.59 O \ ATOM 139 CB PRO A 22 64.271 3.438 10.294 1.00 6.12 C \ ATOM 140 CG PRO A 22 63.783 2.059 10.660 1.00 7.25 C \ ATOM 141 CD PRO A 22 62.941 1.507 9.517 1.00 7.47 C \ HETATM 142 N HYP A 23 66.285 3.961 7.952 1.00 5.60 N \ HETATM 143 CA HYP A 23 67.545 3.695 7.254 1.00 6.94 C \ HETATM 144 C HYP A 23 68.102 2.422 7.889 1.00 8.06 C \ HETATM 145 O HYP A 23 67.759 2.092 9.048 1.00 6.82 O \ HETATM 146 CB HYP A 23 68.399 4.907 7.578 1.00 7.27 C \ HETATM 147 CG HYP A 23 67.364 5.971 7.922 1.00 7.23 C \ HETATM 148 CD HYP A 23 66.356 5.205 8.729 1.00 6.24 C \ HETATM 149 OD1 HYP A 23 66.724 6.370 6.785 1.00 9.90 O \ ATOM 150 N GLY A 24 68.929 1.714 7.139 1.00 7.06 N \ ATOM 151 CA GLY A 24 69.580 0.551 7.697 1.00 7.18 C \ ATOM 152 C GLY A 24 70.751 0.885 8.610 1.00 7.44 C \ ATOM 153 O GLY A 24 71.064 2.076 8.927 1.00 6.73 O \ ATOM 154 N PRO A 25 71.425 -0.156 9.078 1.00 7.67 N \ ATOM 155 CA PRO A 25 72.591 0.025 9.960 1.00 9.30 C \ ATOM 156 C PRO A 25 73.862 0.332 9.135 1.00 11.31 C \ ATOM 157 O PRO A 25 73.897 -0.045 7.950 1.00 12.50 O \ ATOM 158 CB PRO A 25 72.676 -1.306 10.686 1.00 8.27 C \ ATOM 159 CG PRO A 25 72.145 -2.275 9.699 1.00 7.90 C \ ATOM 160 CD PRO A 25 71.093 -1.576 8.885 1.00 6.59 C \ HETATM 161 N HYP A 26 74.886 1.041 9.713 1.00 12.18 N \ HETATM 162 CA HYP A 26 76.141 1.316 8.982 1.00 12.42 C \ HETATM 163 C HYP A 26 76.760 0.119 8.292 1.00 14.39 C \ HETATM 164 O HYP A 26 76.560 -1.055 8.699 1.00 14.31 O \ HETATM 165 CB HYP A 26 77.071 1.873 10.036 1.00 12.80 C \ HETATM 166 CG HYP A 26 76.140 2.629 10.965 1.00 12.42 C \ HETATM 167 CD HYP A 26 74.863 1.785 10.987 1.00 12.42 C \ HETATM 168 OD1 HYP A 26 75.942 3.910 10.369 1.00 12.38 O \ ATOM 169 N GLY A 27 77.522 0.422 7.251 1.00 14.68 N \ ATOM 170 CA GLY A 27 78.152 -0.626 6.480 1.00 17.05 C \ ATOM 171 C GLY A 27 79.437 -1.084 7.111 1.00 18.57 C \ ATOM 172 O GLY A 27 79.890 -0.497 8.081 1.00 18.92 O \ ATOM 173 N PRO A 28 80.055 -2.138 6.572 1.00 20.36 N \ ATOM 174 CA PRO A 28 81.320 -2.685 7.066 1.00 21.33 C \ ATOM 175 C PRO A 28 82.304 -1.527 7.250 1.00 22.01 C \ ATOM 176 O PRO A 28 82.261 -0.579 6.476 1.00 21.87 O \ ATOM 177 CB PRO A 28 81.750 -3.622 5.956 1.00 21.94 C \ ATOM 178 CG PRO A 28 80.471 -4.071 5.336 1.00 22.10 C \ ATOM 179 CD PRO A 28 79.581 -2.861 5.373 1.00 21.01 C \ HETATM 180 N HYP A 29 83.194 -1.595 8.262 1.00 23.32 N \ HETATM 181 CA HYP A 29 84.230 -0.593 8.609 1.00 23.67 C \ HETATM 182 C HYP A 29 85.231 -0.304 7.467 1.00 24.36 C \ HETATM 183 O HYP A 29 86.096 -1.132 7.111 1.00 23.90 O \ HETATM 184 CB HYP A 29 84.901 -1.202 9.829 1.00 24.64 C \ HETATM 185 CG HYP A 29 84.762 -2.691 9.532 1.00 25.14 C \ HETATM 186 CD HYP A 29 83.291 -2.763 9.154 1.00 23.78 C \ HETATM 187 OD1 HYP A 29 85.020 -3.479 10.709 1.00 26.86 O \ HETATM 569 C ACY A 206 14.996 3.326 13.936 1.00 8.42 C \ HETATM 570 O ACY A 206 15.499 4.417 13.672 1.00 6.68 O \ HETATM 571 OXT ACY A 206 15.584 2.452 14.704 1.00 7.85 O \ HETATM 572 CH3 ACY A 206 13.667 2.862 13.421 1.00 9.32 C \ HETATM 593 O HOH A 106 80.144 0.545 10.395 1.00 16.01 O \ HETATM 594 O HOH A 107 12.569 2.820 10.988 1.00 13.08 O \ HETATM 595 O HOH A 112 41.677 3.638 1.531 1.00 6.99 O \ HETATM 596 O HOH A 113 26.066 -4.825 4.580 1.00 5.00 O \ HETATM 597 O HOH A 115 31.932 -6.379 7.990 1.00 5.96 O \ HETATM 598 O HOH A 118 28.365 -4.409 10.031 1.00 8.24 O \ HETATM 599 O HOH A 119 41.400 -5.165 3.994 1.00 7.16 O \ HETATM 600 O HOH A 128 59.702 1.903 -1.699 1.00 4.75 O \ HETATM 601 O HOH A 129 69.637 7.421 2.670 1.00 7.74 O \ HETATM 602 O HOH A 131 20.593 3.079 11.301 1.00 5.69 O \ HETATM 603 O HOH A 134 29.551 -4.465 7.410 1.00 5.29 O \ HETATM 604 O HOH A 136 36.031 -4.309 8.251 1.00 5.73 O \ HETATM 605 O HOH A 137 71.533 3.341 11.377 1.00 7.70 O \ HETATM 606 O HOH A 148 76.637 -1.878 11.688 1.00 13.46 O \ HETATM 607 O HOH A 153 17.948 -3.687 8.801 1.00 8.77 O \ HETATM 608 O HOH A 154 61.657 6.177 6.131 1.00 7.73 O \ HETATM 609 O HOH A 156 20.690 -1.093 10.888 1.00 3.12 O \ HETATM 610 O HOH A 161 45.437 -4.043 2.127 1.00 5.04 O \ HETATM 611 O HOH A 162 26.400 -5.850 10.171 1.00 8.01 O \ HETATM 612 O HOH A 165 28.771 -1.494 10.907 1.00 10.46 O \ HETATM 613 O HOH A 173 38.472 1.434 5.644 1.00 6.53 O \ HETATM 614 O HOH A 174 47.176 -2.174 1.679 1.00 5.00 O \ HETATM 615 O HOH A 176 70.536 -0.007 14.816 1.00 9.46 O \ HETATM 616 O HOH A 177 68.961 5.662 11.270 1.00 11.66 O \ HETATM 617 O HOH A 179 59.915 4.081 0.142 1.00 4.63 O \ HETATM 618 O HOH A 181 69.000 6.970 5.323 1.00 9.38 O \ HETATM 619 O HOH A 184 71.439 0.935 12.467 1.00 12.10 O \ HETATM 620 O HOH A 185 68.589 0.914 11.291 1.00 9.10 O \ \ ""","1cag") cmd.hide("everything") cmd.select("1cag_A","/1cag//A") cmd.show_as("cartoon" ,"1cag_A") cmd.color("white" ,"1cag_A") cmd.zoom("1cag_A", animate=-1) cmd.orient(selection="1cag_A", state=0, animate=0) cmd.select("1cag_A_aln","resi 1-29") cmd.spectrum(expression="count",selection="1cag_A_aln",byres=2) cmd.disable("1cag_A_aln")