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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/12 17:44:10 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 13.5626 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 42.857 \ ATOM 1 N LEU 1 -0.124 34.131 -5.038 1.00 24.96 N \ ATOM 2 CA LEU 1 1.104 34.869 -5.410 1.00 24.96 C \ ATOM 3 CB LEU 1 2.032 33.982 -6.254 1.00 24.96 C \ ATOM 4 CG LEU 1 3.347 34.667 -6.655 1.00 24.96 C \ ATOM 5 CD1 LEU 1 4.251 34.871 -5.434 1.00 24.96 C \ ATOM 6 CD2 LEU 1 4.043 33.926 -7.811 1.00 24.96 C \ ATOM 7 C LEU 1 0.722 36.051 -6.224 1.00 24.96 C \ ATOM 8 O LEU 1 -0.427 36.174 -6.637 1.00 24.96 O \ ATOM 9 N PHE 2 1.693 36.947 -6.483 1.00 36.31 N \ ATOM 10 CA PHE 2 1.446 38.162 -7.207 1.00 36.31 C \ ATOM 11 CB PHE 2 2.722 39.002 -7.328 1.00 36.31 C \ ATOM 12 CG PHE 2 3.075 39.474 -5.958 1.00 36.31 C \ ATOM 13 CD1 PHE 2 3.599 38.599 -5.036 1.00 36.31 C \ ATOM 14 CD2 PHE 2 2.847 40.777 -5.577 1.00 36.31 C \ ATOM 15 CE1 PHE 2 3.915 39.032 -3.765 1.00 36.31 C \ ATOM 16 CE2 PHE 2 3.163 41.218 -4.310 1.00 36.31 C \ ATOM 17 CZ PHE 2 3.701 40.340 -3.397 1.00 36.31 C \ ATOM 18 C PHE 2 0.996 37.839 -8.594 1.00 36.31 C \ ATOM 19 O PHE 2 0.003 38.380 -9.080 1.00 36.31 O \ ATOM 20 N ARG 3 1.705 36.921 -9.268 1.00 60.35 N \ ATOM 21 CA ARG 3 1.331 36.614 -10.613 1.00 60.35 C \ ATOM 22 CB ARG 3 2.263 35.597 -11.303 1.00 60.35 C \ ATOM 23 CG ARG 3 1.814 35.272 -12.734 1.00 60.35 C \ ATOM 24 CD ARG 3 1.991 36.428 -13.722 1.00 60.35 C \ ATOM 25 NE ARG 3 1.134 36.138 -14.906 1.00 60.35 N \ ATOM 26 CZ ARG 3 1.595 35.394 -15.954 1.00 60.35 C \ ATOM 27 NH1 ARG 3 2.849 34.856 -15.936 1.00 60.35 N \ ATOM 28 NH2 ARG 3 0.788 35.171 -17.032 1.00 60.35 N \ ATOM 29 C ARG 3 -0.044 36.037 -10.591 1.00 60.35 C \ ATOM 30 O ARG 3 -0.863 36.331 -11.459 1.00 60.35 O \ ATOM 31 N ARG 4 -0.333 35.196 -9.581 1.00 43.19 N \ ATOM 32 CA ARG 4 -1.605 34.543 -9.510 1.00 43.19 C \ ATOM 33 CB ARG 4 -1.773 33.685 -8.240 1.00 43.19 C \ ATOM 34 CG ARG 4 -1.058 32.334 -8.202 1.00 43.19 C \ ATOM 35 CD ARG 4 -1.375 31.578 -6.907 1.00 43.19 C \ ATOM 36 NE ARG 4 -0.778 30.214 -6.968 1.00 43.19 N \ ATOM 37 CZ ARG 4 -1.471 29.185 -7.537 1.00 43.19 C \ ATOM 38 NH1 ARG 4 -2.665 29.415 -8.155 1.00 43.19 N \ ATOM 39 NH2 ARG 4 -0.970 27.919 -7.467 1.00 43.19 N \ ATOM 40 C ARG 4 -2.692 35.566 -9.419 1.00 43.19 C \ ATOM 41 O ARG 4 -3.663 35.522 -10.174 1.00 43.19 O \ ATOM 42 N GLN 5 -2.553 36.529 -8.493 1.00 50.87 N \ ATOM 43 CA GLN 5 -3.622 37.448 -8.240 1.00 50.87 C \ ATOM 44 CB GLN 5 -3.383 38.314 -6.995 1.00 50.87 C \ ATOM 45 CG GLN 5 -3.361 37.476 -5.710 1.00 50.87 C \ ATOM 46 CD GLN 5 -3.446 38.419 -4.514 1.00 50.87 C \ ATOM 47 OE1 GLN 5 -4.507 38.562 -3.913 1.00 50.87 O \ ATOM 48 NE2 GLN 5 -2.314 39.088 -4.167 1.00 50.87 N \ ATOM 49 C GLN 5 -3.885 38.337 -9.410 1.00 50.87 C \ ATOM 50 O GLN 5 -5.038 38.571 -9.767 1.00 50.87 O \ ATOM 51 N GLY 6 -2.824 38.840 -10.065 1.00 14.99 N \ ATOM 52 CA GLY 6 -3.057 39.750 -11.148 1.00 14.99 C \ ATOM 53 C GLY 6 -3.199 41.098 -10.528 1.00 14.99 C \ ATOM 54 O GLY 6 -3.581 42.073 -11.175 1.00 14.99 O \ ATOM 55 N ILE 7 -2.904 41.162 -9.223 1.00 78.88 N \ ATOM 56 CA ILE 7 -2.988 42.367 -8.464 1.00 78.88 C \ ATOM 57 CB ILE 7 -3.607 42.119 -7.128 1.00 78.88 C \ ATOM 58 CG2 ILE 7 -2.687 41.132 -6.392 1.00 78.88 C \ ATOM 59 CG1 ILE 7 -3.890 43.426 -6.378 1.00 78.88 C \ ATOM 60 CD1 ILE 7 -4.740 43.205 -5.130 1.00 78.88 C \ ATOM 61 C ILE 7 -1.551 42.804 -8.211 1.00 78.88 C \ ATOM 62 O ILE 7 -0.670 41.904 -8.167 1.00 78.88 O \ ATOM 63 OXT ILE 7 -1.318 44.029 -8.036 1.00 78.88 O \ TER 64 ILE 7 \ END \ \ ""","model_3") cmd.show_as("cartoon" ,"model_3") cmd.spectrum(expression="count",selection="model_3_aln",byres=2)