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cmd.read_pdbstr(""""\
HEADER SCOP/ASTRAL domain d1jv2b4 [67341] 02-JUN-09 0000 \
REMARK 99 \
REMARK 99 ASTRAL ASTRAL-version: 1.75 \
REMARK 99 ASTRAL SCOP-sid: d1jv2b4 \
REMARK 99 ASTRAL SCOP-sun: 67341 \
REMARK 99 ASTRAL SCOP-sccs: g.3.11.6 \
REMARK 99 ASTRAL Source-PDB: 1jv2 \
REMARK 99 ASTRAL Source-PDB-REVDAT: 01-APR-03 \
REMARK 99 ASTRAL Region: b:532-562 \
REMARK 99 ASTRAL ASTRAL-SPACI: 0.11 \
REMARK 99 ASTRAL ASTRAL-AEROSPACI: 0.11 \
REMARK 99 ASTRAL Data-updated-release: 1.61 \
ATOM 10186 N LYS B 532 -42.175 35.677 7.137 1.00 98.95 N \
ATOM 10187 CA LYS B 532 -41.899 36.452 8.386 1.00100.00 C \
ATOM 10188 C LYS B 532 -40.877 35.865 9.337 1.00100.00 C \
ATOM 10189 O LYS B 532 -39.643 36.113 9.270 1.00100.00 O \
ATOM 10190 CB LYS B 532 -43.201 36.713 9.169 1.00100.00 C \
ATOM 10191 CG LYS B 532 -44.275 37.500 8.290 1.00100.00 C \
ATOM 10192 CD LYS B 532 -44.065 39.000 8.439 1.00100.00 C \
ATOM 10193 CE LYS B 532 -45.245 39.560 7.746 1.00100.00 C \
ATOM 10194 NZ LYS B 532 -45.047 41.008 7.685 1.00100.00 N \
ATOM 10195 N GLY B 533 -41.386 34.826 10.018 1.00100.00 N \
ATOM 10196 CA GLY B 533 -40.640 34.267 11.101 1.00100.00 C \
ATOM 10197 C GLY B 533 -40.576 32.803 11.316 1.00 99.73 C \
ATOM 10198 O GLY B 533 -40.861 32.094 10.383 1.00 94.95 O \
ATOM 10199 N GLU B 534 -40.143 32.437 12.530 1.00 99.11 N \
ATOM 10200 CA GLU B 534 -39.933 31.100 13.053 1.00 96.64 C \
ATOM 10201 C GLU B 534 -40.039 31.230 14.563 1.00 95.95 C \
ATOM 10202 O GLU B 534 -39.013 31.235 15.239 1.00 94.34 O \
ATOM 10203 CB GLU B 534 -38.509 30.641 12.704 1.00 90.72 C \
ATOM 10204 CG GLU B 534 -38.461 29.493 11.703 1.00 96.72 C \
ATOM 10205 CD GLU B 534 -37.239 29.563 10.831 1.00100.00 C \
ATOM 10206 OE1 GLU B 534 -36.304 28.761 11.036 1.00100.00 O \
ATOM 10207 OE2 GLU B 534 -37.194 30.471 9.974 1.00100.00 O \
ATOM 10208 N MET B 535 -41.261 31.315 15.095 1.00 97.89 N \
ATOM 10209 CA MET B 535 -41.469 31.435 16.554 1.00 97.21 C \
ATOM 10210 C MET B 535 -40.827 30.309 17.368 1.00 95.92 C \
ATOM 10211 O MET B 535 -40.931 30.279 18.602 1.00 88.30 O \
ATOM 10212 CB MET B 535 -42.955 31.461 16.911 1.00100.00 C \
ATOM 10213 CG MET B 535 -43.781 32.532 16.225 1.00100.00 C \
ATOM 10214 SD MET B 535 -45.510 32.427 16.738 1.00100.00 S \
ATOM 10215 CE MET B 535 -46.143 31.179 15.568 1.00100.00 C \
ATOM 10216 N CYS B 536 -40.177 29.398 16.646 1.00100.00 N \
ATOM 10217 CA CYS B 536 -39.482 28.213 17.160 1.00100.00 C \
ATOM 10218 C CYS B 536 -38.515 28.468 18.314 1.00 99.90 C \
ATOM 10219 O CYS B 536 -37.749 27.572 18.689 1.00 96.96 O \
ATOM 10220 CB CYS B 536 -38.691 27.565 16.010 1.00100.00 C \
ATOM 10221 SG CYS B 536 -37.224 28.526 15.481 1.00100.00 S \
ATOM 10222 N SER B 537 -38.584 29.650 18.916 1.00 98.63 N \
ATOM 10223 CA SER B 537 -37.652 29.967 19.973 1.00100.00 C \
ATOM 10224 C SER B 537 -38.067 30.983 21.035 1.00100.00 C \
ATOM 10225 O SER B 537 -39.184 30.990 21.564 1.00 99.63 O \
ATOM 10226 CB SER B 537 -36.330 30.428 19.323 1.00100.00 C \
ATOM 10227 OG SER B 537 -36.534 31.528 18.441 1.00 92.09 O \
ATOM 10228 N GLY B 538 -37.059 31.775 21.367 1.00100.00 N \
ATOM 10229 CA GLY B 538 -37.084 32.840 22.343 1.00100.00 C \
ATOM 10230 C GLY B 538 -35.614 33.238 22.316 1.00100.00 C \
ATOM 10231 O GLY B 538 -35.190 34.104 23.082 1.00100.00 O \
ATOM 10232 N HIS B 539 -34.851 32.549 21.447 1.00100.00 N \
ATOM 10233 CA HIS B 539 -33.412 32.723 21.201 1.00100.00 C \
ATOM 10234 C HIS B 539 -32.447 32.173 22.273 1.00 99.78 C \
ATOM 10235 O HIS B 539 -32.694 31.118 22.860 1.00 96.01 O \
ATOM 10236 CB HIS B 539 -33.105 34.194 20.890 1.00100.00 C \
ATOM 10237 CG HIS B 539 -32.363 34.399 19.608 1.00100.00 C \
ATOM 10238 ND1 HIS B 539 -31.921 33.353 18.827 1.00100.00 N \
ATOM 10239 CD2 HIS B 539 -31.998 35.532 18.963 1.00100.00 C \
ATOM 10240 CE1 HIS B 539 -31.318 33.833 17.754 1.00100.00 C \
ATOM 10241 NE2 HIS B 539 -31.352 35.153 17.813 1.00100.00 N \
ATOM 10242 N GLY B 540 -31.333 32.876 22.490 1.00 99.56 N \
ATOM 10243 CA GLY B 540 -30.348 32.461 23.476 1.00 87.56 C \
ATOM 10244 C GLY B 540 -29.776 31.119 23.092 1.00 89.77 C \
ATOM 10245 O GLY B 540 -30.007 30.131 23.784 1.00 88.39 O \
ATOM 10246 N GLN B 541 -29.076 31.082 21.960 1.00 89.02 N \
ATOM 10247 CA GLN B 541 -28.469 29.857 21.432 1.00 89.16 C \
ATOM 10248 C GLN B 541 -29.510 28.837 20.955 1.00 92.76 C \
ATOM 10249 O GLN B 541 -29.185 27.886 20.245 1.00 85.80 O \
ATOM 10250 CB GLN B 541 -27.535 29.223 22.466 1.00 81.71 C \
ATOM 10251 CG GLN B 541 -26.352 30.103 22.856 1.00 78.70 C \
ATOM 10252 CD GLN B 541 -26.256 30.330 24.355 1.00 79.40 C \
ATOM 10253 OE1 GLN B 541 -26.899 29.638 25.140 1.00 82.40 O \
ATOM 10254 NE2 GLN B 541 -25.448 31.303 24.757 1.00 69.31 N \
ATOM 10255 N CYS B 542 -30.769 29.062 21.323 1.00 96.77 N \
ATOM 10256 CA CYS B 542 -31.864 28.178 20.938 1.00 98.46 C \
ATOM 10257 C CYS B 542 -32.152 28.239 19.442 1.00 98.81 C \
ATOM 10258 O CYS B 542 -32.530 29.295 18.922 1.00100.00 O \
ATOM 10259 CB CYS B 542 -33.122 28.549 21.713 1.00100.00 C \
ATOM 10260 SG CYS B 542 -34.644 27.776 21.089 1.00100.00 S \
ATOM 10261 N SER B 543 -31.998 27.091 18.774 1.00100.00 N \
ATOM 10262 CA SER B 543 -32.217 26.948 17.321 1.00100.00 C \
ATOM 10263 C SER B 543 -33.706 26.865 16.925 1.00100.00 C \
ATOM 10264 O SER B 543 -34.565 27.428 17.606 1.00100.00 O \
ATOM 10265 CB SER B 543 -31.464 25.712 16.790 1.00100.00 C \
ATOM 10266 OG SER B 543 -30.070 25.772 17.067 1.00100.00 O \
ATOM 10267 N CYS B 544 -34.006 26.185 15.816 1.00 94.82 N \
ATOM 10268 CA CYS B 544 -35.389 26.047 15.364 1.00 92.81 C \
ATOM 10269 C CYS B 544 -35.979 24.637 15.579 1.00 92.77 C \
ATOM 10270 O CYS B 544 -35.657 23.989 16.575 1.00 93.04 O \
ATOM 10271 CB CYS B 544 -35.520 26.505 13.908 1.00 97.53 C \
ATOM 10272 SG CYS B 544 -36.770 27.819 13.630 1.00100.00 S \
ATOM 10273 N GLY B 545 -36.832 24.170 14.660 1.00 93.74 N \
ATOM 10274 CA GLY B 545 -37.474 22.864 14.794 1.00 88.90 C \
ATOM 10275 C GLY B 545 -38.531 22.974 15.884 1.00 93.83 C \
ATOM 10276 O GLY B 545 -39.748 22.899 15.624 1.00 83.80 O \
ATOM 10277 N ASP B 546 -38.020 23.195 17.101 1.00 97.41 N \
ATOM 10278 CA ASP B 546 -38.772 23.385 18.344 1.00 97.54 C \
ATOM 10279 C ASP B 546 -37.830 23.595 19.543 1.00 97.51 C \
ATOM 10280 O ASP B 546 -38.163 23.235 20.677 1.00 99.28 O \
ATOM 10281 CB ASP B 546 -39.710 22.212 18.609 1.00 97.29 C \
ATOM 10282 CG ASP B 546 -41.131 22.658 18.818 1.00 99.36 C \
ATOM 10283 OD1 ASP B 546 -41.798 22.073 19.696 1.00100.00 O \
ATOM 10284 OD2 ASP B 546 -41.572 23.593 18.105 1.00 92.72 O \
ATOM 10285 N CYS B 547 -36.645 24.148 19.253 1.00 95.37 N \
ATOM 10286 CA CYS B 547 -35.576 24.477 20.218 1.00 92.77 C \
ATOM 10287 C CYS B 547 -34.575 23.381 20.640 1.00 89.27 C \
ATOM 10288 O CYS B 547 -34.678 22.820 21.735 1.00 86.75 O \
ATOM 10289 CB CYS B 547 -36.157 25.182 21.455 1.00 96.62 C \
ATOM 10290 SG CYS B 547 -34.999 26.248 22.381 1.00100.00 S \
ATOM 10291 N LEU B 548 -33.588 23.117 19.776 1.00 85.89 N \
ATOM 10292 CA LEU B 548 -32.532 22.125 20.037 1.00 82.56 C \
ATOM 10293 C LEU B 548 -31.335 22.887 20.609 1.00 82.57 C \
ATOM 10294 O LEU B 548 -30.655 23.613 19.877 1.00 79.48 O \
ATOM 10295 CB LEU B 548 -32.082 21.428 18.744 1.00 76.33 C \
ATOM 10296 CG LEU B 548 -33.041 20.661 17.834 1.00 70.61 C \
ATOM 10297 CD1 LEU B 548 -32.303 20.205 16.580 1.00 63.56 C \
ATOM 10298 CD2 LEU B 548 -33.633 19.475 18.568 1.00 70.99 C \
ATOM 10299 N CYS B 549 -31.064 22.716 21.900 1.00 79.94 N \
ATOM 10300 CA CYS B 549 -29.947 23.417 22.532 1.00 75.55 C \
ATOM 10301 C CYS B 549 -28.592 23.022 21.953 1.00 73.25 C \
ATOM 10302 O CYS B 549 -28.480 22.029 21.234 1.00 70.75 O \
ATOM 10303 CB CYS B 549 -29.980 23.235 24.049 1.00 76.09 C \
ATOM 10304 SG CYS B 549 -31.451 24.000 24.801 1.00 87.54 S \
ATOM 10305 N ASP B 550 -27.577 23.835 22.237 1.00 70.53 N \
ATOM 10306 CA ASP B 550 -26.226 23.604 21.725 1.00 66.12 C \
ATOM 10307 C ASP B 550 -25.347 22.879 22.750 1.00 64.55 C \
ATOM 10308 O ASP B 550 -25.743 22.715 23.904 1.00 67.09 O \
ATOM 10309 CB ASP B 550 -25.575 24.942 21.324 1.00 69.09 C \
ATOM 10310 CG ASP B 550 -26.525 25.864 20.546 1.00 69.68 C \
ATOM 10311 OD1 ASP B 550 -26.186 26.244 19.398 1.00 59.74 O \
ATOM 10312 OD2 ASP B 550 -27.593 26.226 21.097 1.00 60.71 O \
ATOM 10313 N SER B 551 -24.162 22.445 22.323 1.00 60.60 N \
ATOM 10314 CA SER B 551 -23.224 21.734 23.200 1.00 58.89 C \
ATOM 10315 C SER B 551 -22.852 22.582 24.403 1.00 53.09 C \
ATOM 10316 O SER B 551 -22.521 23.754 24.261 1.00 52.01 O \
ATOM 10317 CB SER B 551 -21.943 21.364 22.446 1.00 64.21 C \
ATOM 10318 OG SER B 551 -22.219 20.553 21.320 1.00 81.65 O \
ATOM 10319 N ASP B 552 -22.872 21.974 25.581 1.00 53.73 N \
ATOM 10320 CA ASP B 552 -22.548 22.680 26.813 1.00 51.29 C \
ATOM 10321 C ASP B 552 -23.605 23.743 27.106 1.00 46.03 C \
ATOM 10322 O ASP B 552 -23.307 24.826 27.608 1.00 47.54 O \
ATOM 10323 CB ASP B 552 -21.142 23.284 26.733 1.00 49.87 C \
ATOM 10324 CG ASP B 552 -20.092 22.258 26.349 1.00 56.30 C \
ATOM 10325 OD1 ASP B 552 -19.225 22.587 25.511 1.00 63.85 O \
ATOM 10326 OD2 ASP B 552 -20.146 21.120 26.866 1.00 54.28 O \
ATOM 10327 N TRP B 553 -24.842 23.399 26.761 1.00 49.49 N \
ATOM 10328 CA TRP B 553 -26.028 24.225 26.960 1.00 49.38 C \
ATOM 10329 C TRP B 553 -27.193 23.249 27.047 1.00 48.57 C \
ATOM 10330 O TRP B 553 -27.309 22.327 26.243 1.00 48.81 O \
ATOM 10331 CB TRP B 553 -26.255 25.182 25.784 1.00 51.34 C \
ATOM 10332 CG TRP B 553 -25.384 26.416 25.776 1.00 57.14 C \
ATOM 10333 CD1 TRP B 553 -24.523 26.803 24.789 1.00 60.38 C \
ATOM 10334 CD2 TRP B 553 -25.319 27.443 26.781 1.00 57.13 C \
ATOM 10335 NE1 TRP B 553 -23.931 27.997 25.116 1.00 60.57 N \
ATOM 10336 CE2 TRP B 553 -24.396 28.401 26.333 1.00 52.56 C \
ATOM 10337 CE3 TRP B 553 -25.945 27.622 28.017 1.00 63.01 C \
ATOM 10338 CZ2 TRP B 553 -24.100 29.544 27.074 1.00 44.35 C \
ATOM 10339 CZ3 TRP B 553 -25.648 28.758 28.747 1.00 56.42 C \
ATOM 10340 CH2 TRP B 553 -24.724 29.698 28.277 1.00 53.55 C \
ATOM 10341 N THR B 554 -28.044 23.440 28.041 1.00 52.58 N \
ATOM 10342 CA THR B 554 -29.180 22.559 28.220 1.00 56.35 C \
ATOM 10343 C THR B 554 -30.444 23.349 28.606 1.00 63.30 C \
ATOM 10344 O THR B 554 -30.454 24.581 28.565 1.00 67.36 O \
ATOM 10345 CB THR B 554 -28.827 21.440 29.239 1.00 45.53 C \
ATOM 10346 OG1 THR B 554 -29.947 20.566 29.405 1.00 67.02 O \
ATOM 10347 CG2 THR B 554 -28.426 22.016 30.587 1.00 32.19 C \
ATOM 10348 N GLY B 555 -31.528 22.644 28.915 1.00 67.04 N \
ATOM 10349 CA GLY B 555 -32.756 23.320 29.284 1.00 64.11 C \
ATOM 10350 C GLY B 555 -33.599 23.716 28.089 1.00 61.23 C \
ATOM 10351 O GLY B 555 -33.092 23.899 26.986 1.00 48.27 O \
ATOM 10352 N TYR B 556 -34.894 23.864 28.333 1.00 66.63 N \
ATOM 10353 CA TYR B 556 -35.863 24.227 27.304 1.00 73.54 C \
ATOM 10354 C TYR B 556 -35.459 25.468 26.498 1.00 68.91 C \
ATOM 10355 O TYR B 556 -35.341 25.413 25.274 1.00 64.79 O \
ATOM 10356 CB TYR B 556 -37.249 24.395 27.964 1.00 81.75 C \
ATOM 10357 CG TYR B 556 -38.389 24.945 27.104 1.00 90.37 C \
ATOM 10358 CD1 TYR B 556 -39.497 25.554 27.702 1.00 93.57 C \
ATOM 10359 CD2 TYR B 556 -38.360 24.875 25.710 1.00 96.96 C \
ATOM 10360 CE1 TYR B 556 -40.538 26.086 26.940 1.00 97.84 C \
ATOM 10361 CE2 TYR B 556 -39.402 25.406 24.936 1.00100.00 C \
ATOM 10362 CZ TYR B 556 -40.489 26.010 25.563 1.00100.00 C \
ATOM 10363 OH TYR B 556 -41.528 26.547 24.829 1.00 98.36 O \
ATOM 10364 N TYR B 557 -35.205 26.572 27.182 1.00 65.84 N \
ATOM 10365 CA TYR B 557 -34.841 27.793 26.485 1.00 69.77 C \
ATOM 10366 C TYR B 557 -33.385 27.795 26.044 1.00 71.82 C \
ATOM 10367 O TYR B 557 -32.979 28.631 25.239 1.00 68.73 O \
ATOM 10368 CB TYR B 557 -35.084 29.008 27.387 1.00 73.96 C \
ATOM 10369 CG TYR B 557 -36.506 29.182 27.891 1.00 77.32 C \
ATOM 10370 CD1 TYR B 557 -36.895 28.653 29.122 1.00 81.92 C \
ATOM 10371 CD2 TYR B 557 -37.451 29.916 27.161 1.00 72.55 C \
ATOM 10372 CE1 TYR B 557 -38.190 28.832 29.612 1.00 80.89 C \
ATOM 10373 CE2 TYR B 557 -38.751 30.101 27.642 1.00 74.38 C \
ATOM 10374 CZ TYR B 557 -39.108 29.562 28.876 1.00 81.36 C \
ATOM 10375 OH TYR B 557 -40.379 29.722 29.379 1.00 84.60 O \
ATOM 10376 N CYS B 558 -32.618 26.824 26.544 1.00 73.54 N \
ATOM 10377 CA CYS B 558 -31.175 26.726 26.285 1.00 73.04 C \
ATOM 10378 C CYS B 558 -30.520 27.750 27.202 1.00 71.17 C \
ATOM 10379 O CYS B 558 -29.432 28.292 26.950 1.00 71.19 O \
ATOM 10380 CB CYS B 558 -30.858 26.970 24.813 1.00 76.68 C \
ATOM 10381 SG CYS B 558 -31.673 25.735 23.767 1.00 85.35 S \
ATOM 10382 N ASN B 559 -31.248 27.977 28.287 1.00 68.07 N \
ATOM 10383 CA ASN B 559 -30.979 28.863 29.404 1.00 62.75 C \
ATOM 10384 C ASN B 559 -29.769 28.277 30.151 1.00 57.52 C \
ATOM 10385 O ASN B 559 -28.702 28.891 30.281 1.00 53.06 O \
ATOM 10386 CB ASN B 559 -32.225 28.701 30.297 1.00 71.53 C \
ATOM 10387 CG ASN B 559 -32.597 29.949 31.057 1.00 74.28 C \
ATOM 10388 OD1 ASN B 559 -31.860 30.948 31.134 1.00 88.00 O \
ATOM 10389 ND2 ASN B 559 -33.808 29.861 31.577 1.00 75.34 N \
ATOM 10390 N CYS B 560 -30.000 27.053 30.623 1.00 54.69 N \
ATOM 10391 CA CYS B 560 -29.072 26.268 31.428 1.00 57.81 C \
ATOM 10392 C CYS B 560 -27.727 25.901 30.824 1.00 56.65 C \
ATOM 10393 O CYS B 560 -27.583 25.823 29.613 1.00 62.09 O \
ATOM 10394 CB CYS B 560 -29.790 25.001 31.896 1.00 56.25 C \
ATOM 10395 SG CYS B 560 -28.951 24.170 33.271 1.00 75.97 S \
ATOM 10396 N THR B 561 -26.745 25.655 31.689 1.00 55.14 N \
ATOM 10397 CA THR B 561 -25.404 25.294 31.240 1.00 52.40 C \
ATOM 10398 C THR B 561 -25.041 23.867 31.641 1.00 58.51 C \
ATOM 10399 O THR B 561 -25.865 23.120 32.177 1.00 65.75 O \
ATOM 10400 CB THR B 561 -24.339 26.227 31.837 1.00 46.94 C \
ATOM 10401 OG1 THR B 561 -24.940 27.466 32.228 1.00 52.57 O \
ATOM 10402 CG2 THR B 561 -23.244 26.495 30.812 1.00 44.99 C \
ATOM 10403 N THR B 562 -23.797 23.493 31.361 1.00 57.50 N \
ATOM 10404 CA THR B 562 -23.278 22.174 31.702 1.00 53.90 C \
ATOM 10405 C THR B 562 -21.975 22.381 32.475 1.00 55.02 C \
ATOM 10406 O THR B 562 -21.303 21.422 32.852 1.00 62.37 O \
ATOM 10407 CB THR B 562 -22.970 21.369 30.440 1.00 54.37 C \
ATOM 10408 OG1 THR B 562 -21.946 22.039 29.698 1.00 62.34 O \
ATOM 10409 CG2 THR B 562 -24.210 21.242 29.572 1.00 45.41 C \
TER 10410 THR B 562 \
END \
\
""","d1jv2b4")
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cmd.select("d1jv2b4_aln","resi 534-555")
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