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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/10 22:55:39 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 31.6273 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 25.000 \ ATOM 1 N GLY 1 22.666 30.069 4.485 1.00 5.87 N \ ATOM 2 CA GLY 1 23.032 30.207 5.913 1.00 5.87 C \ ATOM 3 C GLY 1 22.201 29.293 6.744 1.00 5.87 C \ ATOM 4 O GLY 1 21.195 29.702 7.324 1.00 5.87 O \ ATOM 5 N GLY 2 22.620 28.016 6.822 1.00 13.90 N \ ATOM 6 CA GLY 2 21.885 27.060 7.589 1.00 13.90 C \ ATOM 7 C GLY 2 20.710 26.640 6.772 1.00 13.90 C \ ATOM 8 O GLY 2 19.736 26.102 7.297 1.00 13.90 O \ ATOM 9 N TRP 3 20.763 26.871 5.447 1.00111.67 N \ ATOM 10 CA TRP 3 19.629 26.517 4.647 1.00111.67 C \ ATOM 11 CB TRP 3 19.268 27.609 3.622 1.00111.67 C \ ATOM 12 CG TRP 3 18.081 27.328 2.730 1.00111.67 C \ ATOM 13 CD2 TRP 3 18.181 26.866 1.373 1.00111.67 C \ ATOM 14 CD1 TRP 3 16.753 27.486 2.987 1.00111.67 C \ ATOM 15 NE1 TRP 3 16.017 27.149 1.878 1.00111.67 N \ ATOM 16 CE2 TRP 3 16.882 26.767 0.875 1.00111.67 C \ ATOM 17 CE3 TRP 3 19.262 26.560 0.601 1.00111.67 C \ ATOM 18 CZ2 TRP 3 16.648 26.353 -0.404 1.00111.67 C \ ATOM 19 CZ3 TRP 3 19.025 26.138 -0.689 1.00111.67 C \ ATOM 20 CH2 TRP 3 17.741 26.038 -1.181 1.00111.67 C \ ATOM 21 C TRP 3 19.948 25.268 3.904 1.00111.67 C \ ATOM 22 O TRP 3 20.632 25.287 2.881 1.00111.67 O \ ATOM 23 N SER 4 19.448 24.136 4.433 1.00122.41 N \ ATOM 24 CA SER 4 19.612 22.861 3.812 1.00122.41 C \ ATOM 25 CB SER 4 21.022 22.599 3.252 1.00122.41 C \ ATOM 26 OG SER 4 21.029 21.405 2.483 1.00122.41 O \ ATOM 27 C SER 4 19.338 21.845 4.870 1.00122.41 C \ ATOM 28 O SER 4 18.887 22.175 5.967 1.00122.41 O \ ATOM 29 N GLY 5 19.600 20.569 4.555 1.00184.57 N \ ATOM 30 CA GLY 5 19.354 19.539 5.511 1.00184.57 C \ ATOM 31 C GLY 5 17.911 19.201 5.383 1.00184.57 C \ ATOM 32 O GLY 5 17.183 19.792 4.594 1.00184.57 O \ ATOM 33 N ARG 6 17.458 18.224 6.180 1.00215.07 N \ ATOM 34 CA ARG 6 16.090 17.822 6.095 1.00215.07 C \ ATOM 35 CB ARG 6 15.761 16.563 6.905 1.00215.07 C \ ATOM 36 CG ARG 6 14.326 16.097 6.672 1.00215.07 C \ ATOM 37 CD ARG 6 13.999 15.915 5.189 1.00215.07 C \ ATOM 38 NE ARG 6 15.265 15.578 4.477 1.00215.07 N \ ATOM 39 CZ ARG 6 15.278 14.531 3.599 1.00215.07 C \ ATOM 40 NH1 ARG 6 14.165 13.756 3.457 1.00215.07 N \ ATOM 41 NH2 ARG 6 16.397 14.255 2.868 1.00215.07 N \ ATOM 42 C ARG 6 15.200 18.927 6.568 1.00215.07 C \ ATOM 43 O ARG 6 14.110 19.114 6.035 1.00215.07 O \ ATOM 44 N MET 7 15.650 19.709 7.568 1.00 91.60 N \ ATOM 45 CA MET 7 14.789 20.711 8.129 1.00 91.60 C \ ATOM 46 CB MET 7 15.458 21.567 9.222 1.00 91.60 C \ ATOM 47 CG MET 7 15.389 20.955 10.622 1.00 91.60 C \ ATOM 48 SD MET 7 13.708 20.984 11.327 1.00 91.60 S \ ATOM 49 CE MET 7 14.226 20.846 13.059 1.00 91.60 C \ ATOM 50 C MET 7 14.333 21.644 7.064 1.00 91.60 C \ ATOM 51 O MET 7 13.149 21.985 7.016 1.00 91.60 O \ ATOM 52 N VAL 8 15.236 22.075 6.169 1.00 69.18 N \ ATOM 53 CA VAL 8 14.810 22.979 5.143 1.00 69.18 C \ ATOM 54 CB VAL 8 15.904 23.373 4.190 1.00 69.18 C \ ATOM 55 CG1 VAL 8 16.389 22.137 3.415 1.00 69.18 C \ ATOM 56 CG2 VAL 8 15.353 24.476 3.273 1.00 69.18 C \ ATOM 57 C VAL 8 13.709 22.280 4.352 1.00 69.18 C \ ATOM 58 O VAL 8 12.637 22.910 4.146 1.00 69.18 O \ ATOM 59 OXT VAL 8 13.914 21.099 3.962 1.00 69.18 O \ TER 60 VAL 8 \ END \ \ ""","model_5") cmd.show_as("cartoon" ,"model_5") cmd.spectrum(expression="count",selection="model_5_aln",byres=2)