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cmd.read_pdbstr(""""\ EXPDTA THEORETICAL MODEL, MODELLER 9v7 2013/07/09 03:46:03 \ REMARK 6 MODELLER OBJECTIVE FUNCTION: 12.6870 \ REMARK 6 MODELLER BEST TEMPLATE % SEQ ID: 0.000 \ ATOM 1 N ARG 1 9.610 -4.379 -11.054 1.00178.99 N \ ATOM 2 CA ARG 1 9.321 -3.331 -12.059 1.00178.99 C \ ATOM 3 CB ARG 1 8.510 -2.188 -11.426 1.00178.99 C \ ATOM 4 CG ARG 1 8.170 -1.064 -12.405 1.00178.99 C \ ATOM 5 CD ARG 1 9.252 0.013 -12.522 1.00178.99 C \ ATOM 6 NE ARG 1 9.210 0.856 -11.293 1.00178.99 N \ ATOM 7 CZ ARG 1 9.906 0.491 -10.177 1.00178.99 C \ ATOM 8 NH1 ARG 1 10.625 -0.669 -10.165 1.00178.99 N \ ATOM 9 NH2 ARG 1 9.883 1.290 -9.071 1.00178.99 N \ ATOM 10 C ARG 1 10.602 -2.769 -12.562 1.00178.99 C \ ATOM 11 O ARG 1 11.633 -2.868 -11.898 1.00178.99 O \ ATOM 12 N LYS 2 10.579 -2.172 -13.765 1.00294.15 N \ ATOM 13 CA LYS 2 11.805 -1.633 -14.260 1.00294.15 C \ ATOM 14 CB LYS 2 12.264 -2.256 -15.588 1.00294.15 C \ ATOM 15 CG LYS 2 12.549 -3.756 -15.486 1.00294.15 C \ ATOM 16 CD LYS 2 13.528 -4.124 -14.369 1.00294.15 C \ ATOM 17 CE LYS 2 14.881 -3.419 -14.471 1.00294.15 C \ ATOM 18 NZ LYS 2 15.618 -3.905 -15.657 1.00294.15 N \ ATOM 19 C LYS 2 11.591 -0.179 -14.494 1.00294.15 C \ ATOM 20 O LYS 2 10.525 0.236 -14.946 1.00294.15 O \ ATOM 21 N TRP 3 12.607 0.635 -14.159 1.00 55.53 N \ ATOM 22 CA TRP 3 12.521 2.044 -14.390 1.00 55.53 C \ ATOM 23 CB TRP 3 13.542 2.851 -13.576 1.00 55.53 C \ ATOM 24 CG TRP 3 13.204 2.929 -12.109 1.00 55.53 C \ ATOM 25 CD2 TRP 3 12.766 4.128 -11.453 1.00 55.53 C \ ATOM 26 CD1 TRP 3 13.254 1.958 -11.152 1.00 55.53 C \ ATOM 27 NE1 TRP 3 12.867 2.474 -9.940 1.00 55.53 N \ ATOM 28 CE2 TRP 3 12.566 3.810 -10.110 1.00 55.53 C \ ATOM 29 CE3 TRP 3 12.551 5.390 -11.931 1.00 55.53 C \ ATOM 30 CZ2 TRP 3 12.146 4.753 -9.218 1.00 55.53 C \ ATOM 31 CZ3 TRP 3 12.124 6.338 -11.028 1.00 55.53 C \ ATOM 32 CH2 TRP 3 11.926 6.025 -9.699 1.00 55.53 C \ ATOM 33 C TRP 3 12.841 2.249 -15.861 1.00 55.53 C \ ATOM 34 O TRP 3 13.987 2.677 -16.162 1.00 55.53 O \ ATOM 35 OXT TRP 3 11.945 1.975 -16.702 1.00 55.53 O \ TER 36 TRP 3 \ END \ \ ""","model_2") cmd.show_as("cartoon" ,"model_2") cmd.spectrum(expression="count",selection="model_2_aln",byres=2)