psy2008 311 Q5TRE7::ATPase ASNA1 homolog ::ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting.::Anopheles gambiae (taxid: 7165) very confident COG0003::ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] 100.00::4-303 PF02374::ArsA_ATPase 100.00::2-297 GO:0044297::cell body very confident hh_2woo_A_1::3-62,69-73,76-76,78-83,85-165,167-238,240-240,243-267,269-301 very confident psy9643 412 P55859::Purine nucleoside phosphorylase ::::Bos taurus (taxid: 9913) confident COG0005::Pnp Purine nucleoside phosphorylase [Nucleotide transport and metabolism] 100.00::133-403 PF01048::PNP_UDP_1 99.85::187-401 GO:0005829::cytosol confident hh_2p4s_A_1::127-405 very confident psy17033 148 Q9V813::S-methyl-5'-thioadenosine phosphorylase ::Catalyzes the reversible phosphorylation of S-methyl-5'-thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.::Drosophila melanogaster (taxid: 7227) confident COG0005::Pnp Purine nucleoside phosphorylase [Nucleotide transport and metabolism] 100.00::1-119 PF01048::PNP_UDP_1 99.49::4-117 GO:0005829::cytosol confident hh_1cb0_A_1::1-143 very confident psy17032 283 Q9V813::S-methyl-5'-thioadenosine phosphorylase ::Catalyzes the reversible phosphorylation of S-methyl-5'-thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.::Drosophila melanogaster (taxid: 7227) very confident COG0005::Pnp Purine nucleoside phosphorylase [Nucleotide transport and metabolism] 100.00::4-254 PF01048::PNP_UDP_1 99.98::7-252 GO:0006738::nicotinamide riboside catabolic process very confident hh_1wta_A_1::5-124,130-221,224-260,265-275 very confident psy3139 708 Q6P1B1::Xaa-Pro aminopeptidase 1 ::Contributes to the degradation of bradykinin. Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro.::Mus musculus (taxid: 10090) confident COG0006::PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] 100.00::256-659 PF00557::Peptidase_M24 99.97::434-638 GO:0005737::cytoplasm confident hh_3ctz_A_1::39-69,79-82,90-132,134-141,181-373,409-461,464-707 very confident psy247 413 B7ZMP1::Probable Xaa-Pro aminopeptidase 3 ::::Mus musculus (taxid: 10090) confident COG0006::PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] 100.00::3-413 PF00557::Peptidase_M24 100.00::96-394 GO:0005829::cytosol confident hh_2v3z_A_1::2-142,205-282,284-323,348-372,374-397,399-413 very confident psy2561 134 Q1JPJ2::Xaa-Pro aminopeptidase 1 ::Contributes to the degradation of bradykinin. Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro.::Bos taurus (taxid: 9913) confident COG0006::PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] 99.93::3-112 PF00557::Peptidase_M24 99.70::2-84 GO:0005829::cytosol confident hh_3ctz_A_1::2-46,48-131 very confident psy6861 559 Q6P1B1::Xaa-Pro aminopeptidase 1 ::Contributes to the degradation of bradykinin. Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro.::Mus musculus (taxid: 10090) confident COG0006::PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] 99.97::2-162 PF00557::Peptidase_M24 99.88::2-140 GO:0005829::cytosol confident hh_3ctz_A_1::161-289,291-423,430-490,493-558 very confident psy16135 332 Q11136::Xaa-Pro dipeptidase ::Splits dipeptides with a prolyl or hydroxyprolyl residue in the C-terminal position. Plays an important role in collagen metabolism because of the high level of iminoacids in collagen.::Mus musculus (taxid: 10090) confident COG0006::PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] 100.00::8-290 PF00557::Peptidase_M24 99.98::51-200 GO:0008239::dipeptidyl-peptidase activity confident hh_2iw2_A_1::32-220,222-247,251-260,262-291 very confident psy16136 332 Q11136::Xaa-Pro dipeptidase ::Splits dipeptides with a prolyl or hydroxyprolyl residue in the C-terminal position. Plays an important role in collagen metabolism because of the high level of iminoacids in collagen.::Mus musculus (taxid: 10090) confident COG0006::PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] 100.00::8-290 PF00557::Peptidase_M24 99.98::51-200 GO:0008239::dipeptidyl-peptidase activity confident hh_2iw2_A_1::32-220,222-247,251-260,262-291 very confident psy7579 289 Q1JPJ2::Xaa-Pro aminopeptidase 1 ::Contributes to the degradation of bradykinin. Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides, such as Arg-Pro-Pro.::Bos taurus (taxid: 9913) confident COG0006::PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] 98.59::19-170 PF01321::Creatinase_N 99.71::24-169 GO:0010815::bradykinin catabolic process confident hh_3ctz_A_1::19-160,229-289 very confident psy9410 736 B4EV71::Glutamine--tRNA ligase ::::Proteus mirabilis (strain HI4320) (taxid: 529507) confident COG0008::GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::20-537 PF00749::tRNA-synt_1c 100.00::19-353 GO:0005829::cytosol confident hh_2hz7_A_1::19-86,90-244,251-360,363-368,373-409,416-449,457-459,462-540 very confident psy17575 832 Q9Y105::Probable glutamine--tRNA ligase ::::Drosophila melanogaster (taxid: 7227) very confident COG0008::GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::320-808 PF00749::tRNA-synt_1c 100.00::319-635 GO:0005829::cytosol very confident hh_4g6z_A_1::317-438,448-481,484-535,539-556,573-621,626-640 very confident psy2377 340 A6SX06::Glutamate--tRNA ligase ::Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0008::GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::4-338 PF00749::tRNA-synt_1c 100.00::3-311 GO:0008270::zinc ion binding confident hh_4g6z_A_1::2-129,131-292,294-338 very confident psy2381 350 A6SX06::Glutamate--tRNA ligase ::Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0008::GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::4-336 PF00749::tRNA-synt_1c 100.00::3-311 GO:0008270::zinc ion binding confident hh_4g6z_A_1::2-129,131-292,294-337 very confident psy16872 605 P48525::Glutamate--tRNA ligase, mitochondrial ::Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0008::GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::80-592 PF00749::tRNA-synt_1c 100.00::80-419 GO:0050561::glutamate-tRNA(Gln) ligase activity confident hh_4g6z_A_1::80-138,147-208,210-244,246-351,358-370,399-431,439-484,486-500,507-529,531-592 very confident psy9414 582 Q7VU94::Glutamine--tRNA ligase ::::Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) (taxid: 257313) confident COG0008::GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::8-381 PF03950::tRNA-synt_1c_C 100.00::185-381 GO:0005737::cytoplasm confident hh_2hz7_A_1::1-90,97-206,209-214,219-255,262-295,303-305,308-383 very confident psy198 245 B0TLD6::tRNA threonylcarbamoyladenosine biosynthesis protein RimN ::Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.::Shewanella halifaxensis (strain HAW-EB4) (taxid: 458817) confident COG0009::SUA5 Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis] 100.00::34-229 PF01300::Sua5_yciO_yrdC 100.00::42-219 GO:0051051::negative regulation of transport confident hh_1jcu_A_1::30-155,158-195,198-208,210-224 very confident psy17315 561 Q2HJ33::Obg-like ATPase 1 ::Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.::Bos taurus (taxid: 9913) confident COG0012::Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] 100.00::96-551 PF06071::YchF-GTPase_C 100.00::467-550 GO:0005829::cytosol confident hh_2ohf_A_1::88-182,270-323,345-357,360-555 very confident psy17313 197 Q8SWU7::GTP-binding protein CG1354 ::::Drosophila melanogaster (taxid: 7227) confident COG0012::Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] 100.00::6-187 PF06071::YchF-GTPase_C 100.00::103-186 GO:0005829::cytosol confident hh_2ohf_A_1::6-191 very confident psy2401 363 P0ABU4::GTP-dependent nucleic acid-binding protein EngD ::GTP-dependent nucleic acid-binding protein which may act as a translation factor.::Shigella flexneri (taxid: 623) very confident COG0012::Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis] 100.00::1-363 PF06071::YchF-GTPase_C 100.00::279-362 GO:0016887::ATPase activity very confident hh_2dby_A_1::3-152,154-363 very confident psy16314 854 Q7MV54::Alanine--tRNA ligase ::Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.::Porphyromonas gingivalis (strain ATCC BAA-308 / W83) (taxid: 242619) portable COG0013::AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-803 PF01411::tRNA-synt_2c 100.00::1-780 GO:0005737::cytoplasm confident hh_2zze_A_1::1-5,7-47,53-65,70-102,112-115,119-123,159-160,172-178,234-234,239-239,253-253,313-319,322-333,338-338,353-365,367-401,403-418,420-422,430-430,437-444,503-536,552-598,600-607,609-686,700-732,741-746,749-761,766-803 very confident psy6338 135 P36428::Alanine--tRNA ligase ::Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.::Arabidopsis thaliana (taxid: 3702) confident COG0013::AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-135 PF01411::tRNA-synt_2c 100.00::1-135 GO:0005829::cytosol confident hh_1yfs_A_1::1-26,28-41,50-101,110-135 very confident psy13352 451 Q2KY72::Alanine--tRNA ligase ::Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.::Bordetella avium (strain 197N) (taxid: 360910) confident COG0013::AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-440 PF01411::tRNA-synt_2c 100.00::5-443 GO:0005829::cytosol confident hh_2zze_A_1::1-69,74-126,156-156,165-171,174-185,193-193,206-218,220-221,225-225,228-259,261-331,333-441 very confident psy6230 699 Q9VLM8::Alanine--tRNA ligase, cytoplasmic ::Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain.::Drosophila melanogaster (taxid: 7227) confident COG0013::AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::242-697 PF07973::tRNA_SAD 99.54::103-162 GO:0005829::cytosol confident hh_2ztg_A_1::248-261,268-281,286-294,300-310,313-434,452-491 very confident psy6340 158 Q9RS27::Alanine--tRNA ligase ::Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.::Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) (taxid: 243230) portable COG0013::AlaS Alanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-156 PF07973::tRNA_SAD 99.73::86-133 GO:0044444::cytoplasmic part confident hh_2zze_A_1::1-47,49-93,98-138 very confident psy11678 165 Q9HX20::Gamma-glutamyl phosphate reductase ::Catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.::Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) portable COG0014::ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] 99.97::13-154 PF00171::Aldedh 93.75::98-152 GO:0005739::mitochondrion confident hh_1o20_A_1::12-23,28-47,51-53,71-73,93-152 very confident psy11680 135 Q5R4M8::Delta-1-pyrroline-5-carboxylate synthase ::::Pongo abelii (taxid: 9601) confident COG0014::ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] 100.00::35-117 PF00171::Aldedh 95.16::36-108 GO:0005829::cytosol confident hh_2h5g_A_1::36-134 very confident psy11679 78 Q7W9M7::Gamma-glutamyl phosphate reductase ::Catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.::Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) (taxid: 257311) confident COG0014::ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] 99.95::2-60 no hit no match GO:0005829::cytosol confident hh_1vlu_A_1::2-77 very confident psy6016 137 P21265::Adenylosuccinate lyase ::::Gallus gallus (taxid: 9031) confident COG0015::PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] 100.00::6-137 PF00206::Lyase_1 99.96::7-137 GO:0005829::cytosol confident hh_2j91_A_1::6-137 very confident psy14321 124 P21265::Adenylosuccinate lyase ::::Gallus gallus (taxid: 9031) confident COG0015::PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] 99.82::1-109 PF10397::ADSL_C 99.40::42-94 GO:0005829::cytosol confident hh_2j91_A_1::2-77 very confident psy14322 97 P21265::Adenylosuccinate lyase ::::Gallus gallus (taxid: 9031) confident COG0015::PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] 94.56::17-95 PF10397::ADSL_C 98.07::56-96 GO:0005829::cytosol confident hh_2j91_A_1::44-96 very confident psy7414 320 O16129::Probable phenylalanine--tRNA ligase, mitochondrial ::Catalyzes direct attachment of p-Tyr (Tyr) to tRNAPhe. Permits also, with a lower efficiency, the attachment of m-Tyr to tRNAPhe, thereby opening the way for delivery of the misacylated tRNA to the ribosome and incorporation of ROS-damaged amino acid into proteins.::Drosophila melanogaster (taxid: 7227) confident COG0016::PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] 100.00::59-320 PF01409::tRNA-synt_2d 100.00::58-320 GO:0000049::tRNA binding confident hh_3cmq_A_1::35-198,216-216,231-240,242-319 very confident psy7420 59 Q6AYQ3::Phenylalanine--tRNA ligase, mitochondrial ::Catalyzes direct attachment of p-Tyr (Tyr) to tRNAPhe. Permits also, with a lower efficiency, the attachment of m-Tyr to tRNAPhe, thereby opening the way for delivery of the misacylated tRNA to the ribosome and incorporation of ROS-damaged amino acid into proteins.::Rattus norvegicus (taxid: 10116) confident COG0016::PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] 98.57::1-22 PF01409::tRNA-synt_2d 98.86::1-23 GO:0000049::tRNA binding confident hh_3cmq_A_1::1-54 very confident psy10346 292 Q5ZJQ2::Phenylalanine--tRNA ligase alpha subunit ::::Gallus gallus (taxid: 9031) confident COG0016::PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] 100.00::99-278 PF01409::tRNA-synt_2d 99.86::205-280 GO:0005829::cytosol confident hh_3l4g_A_1::1-45,47-94,96-281 very confident psy9576 338 Q1GZS1::Phenylalanine--tRNA ligase alpha subunit ::::Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) (taxid: 265072) very confident COG0016::PheS Phenylalanyl-tRNA synthetase alpha subunit [Translation, ribosomal structure and biogenesis] 100.00::2-336 PF01409::tRNA-synt_2d 100.00::91-337 GO:0005886::plasma membrane confident hh_2rhq_A_1::83-162,169-243,245-272,274-338 very confident psy8087 658 Q8BP47::Asparagine--tRNA ligase, cytoplasmic ::::Mus musculus (taxid: 10090) confident COG0017::AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::55-448 PF00152::tRNA-synt_2 100.00::139-447 GO:0005739::mitochondrion confident hh_3m4p_A_1::68-314,316-447 very confident psy4384 661 Q9UBL3::Set1/Ash2 histone methyltransferase complex subunit ASH2 ::Component of the Set1/Ash2 histone methyltransferase (HMT) complex, a complex that specifically methylates 'Lys-4' of histone H3, but not if the neighboring 'Lys-9' residue is already methylated. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. May function as a transcriptional regulator. May play a role in hematopoiesis.::Homo sapiens (taxid: 9606) confident COG0017::AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 100.00::507-661 PF00152::tRNA-synt_2 99.92::504-660 GO:0048188::Set1C/COMPASS complex confident hh_3toj_A_1::253-378,414-473,477-502 very confident psy13182 194 P15178::Aspartate--tRNA ligase, cytoplasmic ::Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA.::Rattus norvegicus (taxid: 10116) portable COG0017::AsnS Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] 99.60::66-177 PF01336::tRNA_anti-codon 98.79::81-146 GO:0043229::intracellular organelle confident hh_3i7f_A_1::42-187 very confident psy15414 1458 Q19825::Probable arginine--tRNA ligase, cytoplasmic ::Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis.::Caenorhabditis elegans (taxid: 6239) confident COG0018::ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::476-1072 PF00750::tRNA-synt_1d 100.00::587-933 GO:0000049::tRNA binding confident hh_1iq0_A_1::478-495,499-509,513-520,522-530,536-548,553-556,561-570,572-598,605-695,697-713,716-716,721-841,844-859,861-895,898-903,906-965,968-969,976-1034,1040-1072 very confident psy6783 1119 Q6P1S4::Arginine--tRNA ligase, cytoplasmic ::Forms part of a macromolecular complex that catalyzes the attachment of specific amino acids to cognate tRNAs during protein synthesis.::Xenopus tropicalis (taxid: 8364) confident COG0018::ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::205-1119 PF00750::tRNA-synt_1d 100.00::317-830 GO:0000049::tRNA binding confident hh_2zue_A_1::204-226,228-239,243-260,266-278,283-286,291-300,302-443,448-562,730-740,742-757,759-792,945-1082,1088-1119 very confident psy6240 233 Q02W95::Arginine--tRNA ligase ::::Lactococcus lactis subsp. cremoris (strain SK11) (taxid: 272622) portable COG0018::ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-232 PF00750::tRNA-synt_1d 100.00::45-232 GO:0005739::mitochondrion confident hh_1iq0_A_1::1-13,15-57,65-130,132-151,178-182,184-200,203-203,209-232 very confident psy5226 582 A4G1E2::Arginine--tRNA ligase ::::Herminiimonas arsenicoxydans (taxid: 204773) very confident COG0018::ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::4-582 PF00750::tRNA-synt_1d 100.00::104-449 GO:0005829::cytosol confident hh_2zue_A_1::1-23,26-74,79-87,89-184,186-216,218-234,236-242,247-364,367-388,391-454,456-491,493-582 very confident psy695 214 Q57N89::Arginine--tRNA ligase ::::Salmonella choleraesuis (strain SC-B67) (taxid: 321314) portable COG0018::ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.97::9-167 PF03485::Arg_tRNA_synt_N 99.74::13-112 GO:0005737::cytoplasm confident no hit no match psy6239 151 Q8PX74::Arginine--tRNA ligase ::::Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (taxid: 192952) portable COG0018::ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-151 PF05746::DALR_1 100.00::35-151 GO:0005739::mitochondrion confident hh_2zue_A_1::1-60,62-151 very confident psy9378 522 P00860::Ornithine decarboxylase ::::Mus musculus (taxid: 10090) confident COG0019::LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism] 100.00::189-522 PF02784::Orn_Arg_deC_N 100.00::217-431 GO:0005829::cytosol confident hh_7odc_A_1::209-325,327-522 very confident psy16152 295 Q99KU1::Dehydrodolichyl diphosphate synthase ::Catalyzes cis-prenyl chain elongation to produce the polyprenyl backbone of dolichol, a glycosyl carrier-lipid required for the biosynthesis of several classes of glycoprotein.::Mus musculus (taxid: 10090) confident COG0020::UppS Undecaprenyl pyrophosphate synthase [Lipid metabolism] 100.00::24-257 PF01255::Prenyltransf 100.00::32-256 GO:0019408::dolichol biosynthetic process confident hh_3ugs_B_1::23-104,108-169,173-176,181-195,198-256 very confident psy10436 208 P29401::Transketolase ::::Homo sapiens (taxid: 9606) portable COG0021::TktA Transketolase [Carbohydrate transport and metabolism] 100.00::26-208 PF02779::Transket_pyr 99.83::43-208 GO:0042803::protein homodimerization activity confident hh_3mos_A_1::27-71,77-86,90-208 very confident psy8699 325 P21953::2-oxoisovalerate dehydrogenase subunit beta, mitochondrial ::The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).::Homo sapiens (taxid: 9606) very confident COG0022::AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] 100.00::8-325 PF02779::Transket_pyr 100.00::6-179 GO:0003826::alpha-ketoacid dehydrogenase activity very confident hh_2bfd_B_1::9-111,113-293,295-309,311-325 very confident psy10429 207 Q9D051::Pyruvate dehydrogenase E1 component subunit beta, mitochondrial ::The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).::Mus musculus (taxid: 10090) confident COG0022::AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion] 100.00::1-207 PF02779::Transket_pyr 100.00::1-176 GO:0005774::vacuolar membrane confident hh_2ozl_B_1::1-207 very confident psy14509 243 Q2HJ47::Density-regulated protein ::May be involved in the translation of target mRNAs by scanning and recognition of the initiation codon.::Bos taurus (taxid: 9913) confident COG0023::SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis] 99.90::135-216 PF01253::SUI1 99.88::135-211 GO:0003743::translation initiation factor activity confident hh_2if1_A_1::134-160,162-205,208-218 confident psy14758 134 P42678::Protein translation factor SUI1 homolog ::Probably involved in translation.::Anopheles gambiae (taxid: 7165) confident COG0023::SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis] 99.89::5-131 PF01253::SUI1 99.74::28-131 GO:0005829::cytosol confident hh_2if1_A_1::5-68,79-81,94-101,106-112,115-122,125-131 very confident psy4461 95 P42678::Protein translation factor SUI1 homolog ::Probably involved in translation.::Anopheles gambiae (taxid: 7165) very confident COG0023::SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis] 99.96::11-93 PF01253::SUI1 99.93::11-87 GO:0071456::cellular response to hypoxia very confident hh_2if1_A_1::12-95 very confident psy14757 90 P42678::Protein translation factor SUI1 homolog ::Probably involved in translation.::Anopheles gambiae (taxid: 7165) very confident COG0023::SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis] 99.80::12-76 PF01253::SUI1 99.67::13-76 GO:0071456::cellular response to hypoxia confident hh_2if1_A_1::1-77 very confident psy9913 309 P0A5J2::Methionine aminopeptidase 2 ::Removes the N-terminal methionine from nascent proteins, when the penultimate amino acid is alanine or proline, but enzyme activity is remarkably low when the second residue is phenylalanine or leucine. With glycine at the second position, Map is more active with a tetrapeptide than with a tripeptide.::Mycobacterium tuberculosis (taxid: 1773) confident COG0024::Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] 100.00::19-309 PF00557::Peptidase_M24 100.00::27-301 GO:0005829::cytosol confident hh_3pka_A_1::16-179,227-309 very confident psy11713 769 P53582::Methionine aminopeptidase 1 ::Removes the N-terminal methionine from nascent proteins. Required for normal progression through the cell cycle.::Homo sapiens (taxid: 9606) confident COG0024::Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] 100.00::479-745 PF00557::Peptidase_M24 99.98::482-730 GO:0006508::proteolysis confident rp_2b3h_A_1::248-411 very confident psy3761 256 Q9ZCD3::Methionine aminopeptidase ::Removes the N-terminal methionine from nascent proteins.::Rickettsia prowazekii (strain Madrid E) (taxid: 272947) very confident COG0024::Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] 100.00::1-245 PF00557::Peptidase_M24 100.00::1-234 GO:0008198::ferrous iron binding very confident hh_3pka_A_1::1-38,40-51,58-242 very confident psy15498 635 P50579::Methionine aminopeptidase 2 ::Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis.::Homo sapiens (taxid: 9606) confident COG0024::Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] 100.00::316-635 PF00557::Peptidase_M24 99.97::324-525 GO:0008235::metalloexopeptidase activity confident hh_1b6a_A_1::85-92,97-97,100-245,274-276,426-635 very confident psy15502 99 P50579::Methionine aminopeptidase 2 ::Protects eukaryotic initiation factor EIF2S1 from translation-inhibiting phosphorylation by inhibitory kinases such as EIF2AK2/PKR and EIF2AK1/HCR. Plays a critical role in the regulation of protein synthesis.::Homo sapiens (taxid: 9606) confident COG0024::Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] 99.60::27-83 PF00557::Peptidase_M24 97.03::39-79 GO:0008235::metalloexopeptidase activity confident rp_1b6a_A_1::42-99 very confident psy18115 365 P50580::Proliferation-associated protein 2G4 ::May play a role in a ERBB3-regulated signal transduction pathway. Seems be involved in growth regulation. Acts a corepressor of the androgen receptor (AR) and is regulated by the ERBB3 ligand neuregulin-1/heregulin (HRG). Inhibits transcription of some E2F1-regulated promoters, probably by recruiting histone acetylase (HAT) activity. Binds RNA. Associates with 28S, 18S and 5.8S mature rRNAs, several rRNA precursors and probably U3 small nucleolar RNA. May be involved in regulation of intermediate and late steps of rRNA processing. May be involved in ribosome assembly (By similarity). Mediates cap-independent translation of specific viral IRESs (internal ribosomal entry site). Together with PTBP1 is required for the translation initiation on the foot-and-mouth disease virus (FMDV) IRES.::Mus musculus (taxid: 10090) very confident COG0024::Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis] 100.00::13-338 PF00557::Peptidase_M24 100.00::21-232 GO:0045892::negative regulation of transcription, DNA-dependent very confident hh_2q8k_A_1::9-365 very confident psy16350 469 Q552S0::Sodium/hydrogen exchanger 1 ::Regulation of intracellular pH homeostasis in response to cAMP, which is essential for chemotaxis. Necessary for F-actin localization and the kinetics of actin polymerization during chemotaxis and cell polarity but not for directional sensing.::Dictyostelium discoideum (taxid: 44689) portable COG0025::NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] 99.96::240-466 PF00999::Na_H_Exchanger 99.56::242-445 GO:0005773::vacuole confident hh_1y4e_A_1::78-104 confident psy14648 154 Q8R4D1::Sodium/hydrogen exchanger 8 ::Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.::Mus musculus (taxid: 10090) confident COG0025::NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] 99.83::2-138 PF00999::Na_H_Exchanger 98.45::6-124 GO:0015386::potassium:hydrogen antiporter activity confident hh_2kbv_A_1::67-91 portable psy5406 523 Q8R4D1::Sodium/hydrogen exchanger 8 ::Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.::Mus musculus (taxid: 10090) confident COG0025::NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] 100.00::118-505 PF00999::Na_H_Exchanger 99.96::129-494 GO:0031090::organelle membrane confident hh_1zcd_A_1::183-227,233-235,242-301,305-306,308-311,315-317,322-322,329-331,335-349,353-359,362-460 portable psy14417 120 Q9Y7M1::Putative 2-hydroxyacyl-CoA lyase ::Catalyzes a carbon-carbon cleavage reaction; cleaves a 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0028::IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism] 99.79::1-114 PF00205::TPP_enzyme_M 99.84::1-84 GO:0044444::cytoplasmic part confident hh_1ybh_A_1::1-38,40-94,96-114 very confident psy15089 661 Q94523::Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial ::Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). Maintaining electron transport chain function is required to prevent neurodegenerative changes seen in both early- and late-onset disorders.::Drosophila melanogaster (taxid: 7227) very confident COG0029::NadB Aspartate oxidase [Coenzyme metabolism] 100.00::60-628 PF00890::FAD_binding_2 100.00::60-454 GO:0005749::mitochondrial respiratory chain complex II very confident hh_2h88_A_1::50-661 very confident psy9575 786 Q9UTJ7::Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial ::Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0029::NadB Aspartate oxidase [Coenzyme metabolism] 100.00::1-541 PF00890::FAD_binding_2 100.00::1-384 GO:0005829::cytosol confident hh_1kf6_A_1::1-40,43-103,111-154,156-347,357-406,410-551,557-567 very confident psy13718 165 Q9VTM5::Dimethyladenosine transferase 1, mitochondrial ::Probable S-adenosyl-L-methionine-dependent methyltransferase which specifically dimethylates mitochondrial 12S rRNA at the conserved stem loop. In contrast to mtTFB2, it does not have a critical role in either transcription or regulation of the copy number of mitochondrial DNA.::Drosophila melanogaster (taxid: 7227) portable COG0030::KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] 100.00::1-126 PF00398::RrnaAD 99.96::1-125 GO:0005739::mitochondrion confident hh_3uzu_A_1::1-87,95-125 very confident psy17126 240 Q1RK29::Ribosomal RNA small subunit methyltransferase A ::Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.::Rickettsia bellii (strain RML369-C) (taxid: 336407) confident COG0030::KsgA Dimethyladenosine transferase (rRNA methylation) [Translation, ribosomal structure and biogenesis] 100.00::23-200 PF00398::RrnaAD 99.95::23-152 GO:0042645::mitochondrial nucleoid confident hh_3fut_A_1::8-52,54-73,75-95,98-117,130-153,155-200 very confident psy14801 404 P46794::Cystathionine beta-synthase ::::Dictyostelium discoideum (taxid: 44689) confident COG0031::CysK Cysteine synthase [Amino acid transport and metabolism] 100.00::17-321 PF00291::PALP 100.00::17-314 GO:0009570::chloroplast stroma confident hh_1jbq_A_1::17-230,234-297,357-397 very confident psy240 376 Q06203::Amidophosphoribosyltransferase ::::Homo sapiens (taxid: 9606) confident COG0034::PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism] 100.00::18-358 PF00310::GATase_2 99.94::70-220 GO:0005829::cytosol confident hh_1ecf_A_1::22-32,39-66,69-122,124-222,236-246,258-262,274-302,306-333 very confident psy4430 84 Q6NYU7::Uracil phosphoribosyltransferase homolog ::::Danio rerio (taxid: 7955) confident COG0035::Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] 99.91::11-83 PF14681::UPRTase 99.89::4-84 GO:0005829::cytosol confident hh_1bd3_D_1::4-83 very confident psy4429 186 Q6NYU7::Uracil phosphoribosyltransferase homolog ::::Danio rerio (taxid: 7955) confident COG0035::Upp Uracil phosphoribosyltransferase [Nucleotide transport and metabolism] 100.00::26-186 PF14681::UPRTase 100.00::32-186 GO:0005829::cytosol confident hh_1bd3_D_1::18-125,153-186 very confident psy11600 277 Q96AT9::Ribulose-phosphate 3-epimerase ::Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.::Homo sapiens (taxid: 9606) confident COG0036::Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism] 100.00::5-255 PF00834::Ribul_P_3_epim 100.00::7-243 GO:0005829::cytosol confident hh_1h1y_A_1::4-61,63-99,143-254 very confident psy11601 82 Q9SE42::Ribulose-phosphate 3-epimerase, cytoplasmic isoform ::Catalyzes the reversible epimerization of D-ribulose 5-phosphate to D-xylulose 5-phosphate.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0036::Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism] 99.93::1-79 PF00834::Ribul_P_3_epim 99.86::1-64 GO:0005829::cytosol confident hh_1rpx_A_1::1-78 very confident psy16399 165 Q6FMB5::Cytoplasmic tRNA 2-thiolation protein 1 ::Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident COG0037::MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] 99.33::104-165 PF01171::ATP_bind_3 98.46::16-60 GO:0002144::cytosolic tRNA wobble base thiouridylase complex confident hh_1wy5_A_1::103-152,155-165 confident psy16535 333 Q6FMB5::Cytoplasmic tRNA 2-thiolation protein 1 ::Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident COG0037::MesJ tRNA(Ile)-lysidine synthase MesJ [Cell cycle control, cell division, chromosome partitioning] 99.95::36-233 PF01171::ATP_bind_3 99.96::17-176 GO:0002144::cytosolic tRNA wobble base thiouridylase complex confident hh_1wy5_A_1::29-218,223-223,228-242,245-256,264-277,280-296 very confident psy6631 704 P35523::Chloride channel protein 1 ::Voltage-gated chloride channel. Chloride channels have several functions including the regulation of cell volume; membrane potential stabilization, signal transduction and transepithelial transport.::Homo sapiens (taxid: 9606) confident COG0038::EriC Chloride channel protein EriC [Inorganic ion transport and metabolism] 100.00::52-406 PF00654::Voltage_CLC 100.00::52-389 GO:0005254::chloride channel activity confident hh_3org_A_1::33-66,70-72,74-83,86-139,144-166,168-193,195-195,200-231,237-255,272-327,337-414,417-450,452-462,475-524,526-549 very confident psy15907 260 P51798::H(+)/Cl(-) exchange transporter 7 ::Mediates the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the lysosome lumen.::Homo sapiens (taxid: 9606) confident COG0038::EriC Chloride channel protein EriC [Inorganic ion transport and metabolism] 100.00::2-227 PF00654::Voltage_CLC 100.00::3-229 GO:0005622::intracellular confident hh_1ots_A_1::4-47,59-61,63-106,109-138,145-146,149-210,215-229 very confident psy6634 90 Q9VGH7::Chloride channel protein 2 ::Voltage-gated chloride channel. Chloride channels have several functions including the regulation of cell volume; membrane potential stabilization, signal transduction and transepithelial transport.::Drosophila melanogaster (taxid: 7227) very confident COG0038::EriC Chloride channel protein EriC [Inorganic ion transport and metabolism] 99.38::14-79 PF00654::Voltage_CLC 99.46::15-84 GO:0006821::chloride transport confident hh_3org_A_1::14-78 very confident psy15906 352 P51798::H(+)/Cl(-) exchange transporter 7 ::Mediates the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the lysosome lumen.::Homo sapiens (taxid: 9606) portable COG0038::EriC Chloride channel protein EriC [Inorganic ion transport and metabolism] 99.90::38-185 PF00654::Voltage_CLC 99.91::36-166 GO:0031090::organelle membrane confident hh_3org_A_1::40-109,112-137,139-296 very confident psy4183 898 Q9R279::H(+)/Cl(-) exchange transporter 3 ::Mediates the exchange of chloride ions against protons. Functions as antiporter and contributes to the acidification of the endosome and synaptic vesicle lumen, and may thereby affect vesicle trafficking and exocytosis. May play an important role in neuronal cell function through regulation of membrane excitability by protein kinase C. It could help neuronal cells to establish short-term memory.::Cavia porcellus (taxid: 10141) confident COG0038::EriC Chloride channel protein EriC [Inorganic ion transport and metabolism] 100.00::264-649 PF00654::Voltage_CLC 100.00::267-637 GO:0045177::apical part of cell confident hh_1ots_A_1::259-292,294-299,302-308,310-317,319-331,333-352,355-416,419-424,427-508,510-561,565-566,578-614,619-647 very confident psy14621 248 P00346::Malate dehydrogenase, mitochondrial ::::Sus scrofa (taxid: 9823) confident COG0039::Mdh Malate/lactate dehydrogenases [Energy production and conversion] 100.00::34-246 PF02866::Ldh_1_C 100.00::94-245 GO:0005730::nucleolus confident hh_1mld_A_1::34-248 very confident psy9582 329 Q2L068::Malate dehydrogenase ::Catalyzes the reversible oxidation of malate to oxaloacetate.::Bordetella avium (strain 197N) (taxid: 360910) very confident COG0039::Mdh Malate/lactate dehydrogenases [Energy production and conversion] 100.00::6-328 PF02866::Ldh_1_C 100.00::159-327 GO:0005829::cytosol very confident hh_1b8p_A_1::1-215,217-251,253-328 very confident psy9933 208 Q5NVR2::Malate dehydrogenase, mitochondrial ::::Pongo abelii (taxid: 9601) confident COG0039::Mdh Malate/lactate dehydrogenases [Energy production and conversion] 100.00::1-205 PF02866::Ldh_1_C 99.98::63-205 GO:0006475::internal protein amino acid acetylation confident hh_1mld_A_1::1-133,138-207 very confident psy17689 216 P06151::L-lactate dehydrogenase A chain ::::Mus musculus (taxid: 10090) confident COG0039::Mdh Malate/lactate dehydrogenases [Energy production and conversion] 100.00::2-216 PF02866::Ldh_1_C 99.97::101-216 GO:0031668::cellular response to extracellular stimulus confident hh_4aj2_A_1::3-216 very confident psy12825 488 Q95028::L-lactate dehydrogenase ::::Drosophila melanogaster (taxid: 7227) confident COG0039::Mdh Malate/lactate dehydrogenases [Energy production and conversion] 100.00::178-487 PF02866::Ldh_1_C 100.00::320-487 GO:0031668::cellular response to extracellular stimulus confident hh_3ldh_A_1::163-361,371-372,385-453,455-487 very confident psy18231 540 Q5XGI5::WD repeat domain-containing protein 83 ::Molecular scaffold protein for various multimeric protein complexes. Acts as a module in the assembly of a multicomponent scaffold for the ERK pathway, linking ERK responses to specific agonists. Also involved in response to hypoxia by acting as a negative regulator of HIF1A/HIF-1-alpha.::Xenopus tropicalis (taxid: 8364) portable COG0042::tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] 99.94::10-123 PF01207::Dus 99.92::19-123 GO:0000375::RNA splicing, via transesterification reactions confident no hit no match psy4403 101 Q9NX74::tRNA-dihydrouridine(20) synthase [NAD(P)+]-like ::Dihydrouridine synthase. Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.::Homo sapiens (taxid: 9606) portable COG0042::tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] 99.85::1-100 PF01207::Dus 99.80::1-100 GO:0005737::cytoplasm confident hh_3b0p_A_1::1-5,9-21,24-100 confident psy2386 311 Q87L85::tRNA-dihydrouridine synthase A ::Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.::Vibrio parahaemolyticus (taxid: 670) very confident COG0042::tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] 100.00::1-308 PF01207::Dus 100.00::1-307 GO:0008152::metabolic process confident hh_1vhn_A_1::1-17,19-39,41-70,72-130,135-156,158-162,170-182,186-236,239-297,299-308 very confident psy4398 306 O52536::tRNA-dihydrouridine synthase B ::Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.::Klebsiella pneumoniae (taxid: 573) confident COG0042::tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] 100.00::22-263 PF01207::Dus 100.00::34-263 GO:0050660::flavin adenine dinucleotide binding confident hh_3b0p_A_1::28-74,92-95,97-265 very confident psy7343 487 Q8K582::tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like ::Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.::Rattus norvegicus (taxid: 10116) confident COG0042::tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] 100.00::78-443 PF01207::Dus 100.00::152-438 GO:0055114::oxidation-reduction process confident hh_1vhn_A_1::148-197,199-312,315-329,332-409,413-443 very confident psy6858 592 Q9EQF5::Dihydropyrimidinase ::Catalyzes the second step of the reductive pyrimidine degradation, the reversible hydrolytic ring opening of dihydropyrimidines. Can catalyzes the ring opening of 5,6-dihydrouracil to N-carbamyl-alanine and of 5,6-dihydrothymine to N-carbamyl-amino isobutyrate.::Mus musculus (taxid: 10090) confident COG0044::PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] 100.00::19-471 PF13147::Amidohydro_4 99.84::63-419 GO:0005829::cytosol very confident hh_3dc8_A_1::19-54,58-132,134-274,279-280,283-318,320-485,487-498,502-511,513-517 very confident psy10113 596 Q9EQF5::Dihydropyrimidinase ::Catalyzes the second step of the reductive pyrimidine degradation, the reversible hydrolytic ring opening of dihydropyrimidines. Can catalyzes the ring opening of 5,6-dihydrouracil to N-carbamyl-alanine and of 5,6-dihydrothymine to N-carbamyl-amino isobutyrate.::Mus musculus (taxid: 10090) confident COG0044::PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] 100.00::19-471 PF13147::Amidohydro_4 99.85::63-419 GO:0005829::cytosol very confident hh_3dc8_A_1::19-54,58-132,134-274,279-280,283-318,320-485,487-498,502-509 very confident psy16949 232 P53396::ATP-citrate synthase ::ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues. Has a central role in de novo lipid synthesis. In nervous tissue it may be involved in the biosynthesis of acetylcholine.::Homo sapiens (taxid: 9606) confident COG0045::SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] 100.00::10-231 PF08442::ATP-grasp_2 99.92::3-103 GO:0006101::citrate metabolic process confident hh_3mwd_A_1::2-53,55-231 very confident psy3769 974 A4G230::Succinyl-CoA ligase [ADP-forming] subunit beta ::::Herminiimonas arsenicoxydans (taxid: 204773) confident COG0045::SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] 100.00::1-345 PF08442::ATP-grasp_2 100.00::2-203 GO:0006104::succinyl-CoA metabolic process confident hh_1oi7_A_1::312-319,323-344,348-426,429-586 very confident psy7785 525 Q3MHX5::Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial ::Catalyzes the GTP-dependent ligation of succinate and CoA to form succinyl-CoA.::Bos taurus (taxid: 9913) confident COG0045::SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] 100.00::11-430 PF08442::ATP-grasp_2 100.00::11-248 GO:0006104::succinyl-CoA metabolic process confident hh_2fp4_B_1::11-181,215-430 very confident psy12143 443 P53588::Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) very confident COG0045::SucC Succinyl-CoA synthetase, beta subunit [Energy production and conversion] 100.00::34-425 PF13549::ATP-grasp_5 100.00::31-257 GO:0005813::centrosome very confident hh_3ufx_B_1::34-73,75-90,98-121,129-211,213-407,410-425 very confident psy5570 875 Q5SUR0::Phosphoribosylformylglycinamidine synthase ::::Mus musculus (taxid: 10090) portable COG0046::PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] 100.00::1-596 PF13507::GATase_5 100.00::670-834 GO:0003735::structural constituent of ribosome confident hh_3ugj_A_1::1-15,20-68,70-181,192-205,208-249,279-279,282-285,369-378,393-410,412-412,417-428,433-469,471-478,485-491,516-545,552-565,572-632,634-637,659-662,666-834 very confident psy2262 137 Q29RU1::28S ribosomal protein S12, mitochondrial ::::Bos taurus (taxid: 9913) very confident COG0048::RpsL Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] 100.00::16-133 PF00164::Ribosom_S12_S23 100.00::23-133 GO:0001666::response to hypoxia very confident hh_2xzm_L_1::42-120 very confident psy4801 143 Q8T3U2::40S ribosomal protein S23 ::::Drosophila melanogaster (taxid: 7227) very confident COG0048::RpsL Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] 100.00::7-142 PF00164::Ribosom_S12_S23 100.00::29-142 GO:0022627::cytosolic small ribosomal subunit very confident hh_2xzm_L_1::1-37,39-140 very confident psy7476 143 Q8T3U2::40S ribosomal protein S23 ::::Drosophila melanogaster (taxid: 7227) very confident COG0048::RpsL Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] 100.00::7-142 PF00164::Ribosom_S12_S23 100.00::29-142 GO:0022627::cytosolic small ribosomal subunit very confident hh_2xzm_L_1::1-37,39-140 very confident psy16455 82 B4U739::30S ribosomal protein S12 ::Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.::Hydrogenobaculum sp. (strain Y04AAS1) (taxid: 380749) confident COG0048::RpsL Ribosomal protein S12 [Translation, ribosomal structure and biogenesis] 99.98::3-79 PF00164::Ribosom_S12_S23 100.00::9-79 GO:0034337::RNA folding confident hh_2vqe_L_1::2-79 very confident psy4237 225 Q95Q11::28S ribosomal protein S7, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG0049::RpsG Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] 100.00::63-217 PF00177::Ribosomal_S7 100.00::65-217 GO:0003723::RNA binding confident hh_1rss_A_1::64-104,121-179,181-224 very confident psy10065 215 Q5E988::40S ribosomal protein S5 ::::Bos taurus (taxid: 9913) very confident COG0049::RpsG Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] 100.00::77-215 PF00177::Ribosomal_S7 100.00::77-214 GO:0005576::extracellular region very confident hh_2zkq_g_1::41-214 very confident psy10067 124 Q9ZUT9::40S ribosomal protein S5-1 ::::Arabidopsis thaliana (taxid: 3702) confident COG0049::RpsG Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] 99.74::66-123 PF00177::Ribosomal_S7 99.14::66-123 GO:0005618::cell wall confident hh_2zkq_g_1::30-123 very confident psy4243 104 Q57CQ4::30S ribosomal protein S7 ::One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA.::Brucella abortus biovar 1 (strain 9-941) (taxid: 262698) portable COG0049::RpsG Ribosomal protein S7 [Translation, ribosomal structure and biogenesis] 100.00::2-96 PF00177::Ribosomal_S7 99.97::2-96 GO:0043229::intracellular organelle confident hh_1hus_A_1::2-58,60-103 very confident psy3124 463 Q2YAZ9::Elongation factor Tu ::This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.::Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) (taxid: 323848) very confident COG0050::TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] 100.00::35-428 PF00009::GTP_EFTU 100.00::43-236 GO:0003746::translation elongation factor activity very confident hh_2c78_A_1::37-218,221-381,383-429 very confident psy8869 593 A6T3K6::Elongation factor Tu ::This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) very confident COG0050::TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] 100.00::1-391 PF00009::GTP_EFTU 99.97::10-204 GO:0005829::cytosol confident hh_2c78_A_1::4-187,190-393 very confident psy15217 396 A6T3K6::Elongation factor Tu ::This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) very confident COG0050::TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] 100.00::1-396 PF00009::GTP_EFTU 100.00::10-204 GO:0005829::cytosol very confident hh_2c78_A_1::4-186,189-396 very confident psy9631 90 Q8BFR5::Elongation factor Tu, mitochondrial ::This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.::Mus musculus (taxid: 10090) confident COG0050::TufB GTPases - translation elongation factors [Translation, ribosomal structure and biogenesis] 99.97::1-75 PF03143::GTP_EFTU_D3 99.42::2-72 GO:0003746::translation elongation factor activity confident hh_1d2e_A_1::2-42,44-72 very confident psy13427 268 P82923::28S ribosomal protein S2, mitochondrial ::::Bos taurus (taxid: 9913) confident COG0052::RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] 100.00::67-253 PF00318::Ribosomal_S2 100.00::72-249 GO:0002119::nematode larval development confident hh_3bbn_B_1::66-186,191-251 very confident psy3759 844 A6SZQ1::30S ribosomal protein S2 ::::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0052::RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] 100.00::2-226 PF00318::Ribosomal_S2 100.00::8-224 GO:0005618::cell wall confident no hit no match psy13351 837 A6SZQ1::30S ribosomal protein S2 ::::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0052::RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] 100.00::1-219 PF00318::Ribosomal_S2 100.00::1-217 GO:0005618::cell wall confident hh_1ybd_A_1::415-421,424-648 very confident psy3752 1012 Q21WY9::30S ribosomal protein S2 ::::Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) (taxid: 338969) confident COG0052::RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] 100.00::169-394 PF00318::Ribosomal_S2 100.00::176-392 GO:0005618::cell wall confident no hit no match psy16263 112 Q0PXX8::40S ribosomal protein SA ::Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.::Diaphorina citri (taxid: 121845) confident COG0052::RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] 99.72::13-100 PF00318::Ribosomal_S2 99.48::18-95 GO:0005875::microtubule associated complex confident hh_2zkq_b_1::1-84,89-94 very confident psy16262 222 P14206::40S ribosomal protein SA ::Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteria. Enables malignant tumor cells to penetrate laminin tissue and vessel barriers. Activates precursor thymic anti-OFA/iLRP specific cytotoxic T-cell. May induce CD8 T-suppressor cells secreting IL-10. Acts as a PPP1R16B-dependent substrate of PPP1CA.::Mus musculus (taxid: 10090) very confident COG0052::RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] 100.00::11-190 PF00318::Ribosomal_S2 100.00::18-186 GO:0043025::neuronal cell body very confident hh_2zkq_b_1::1-200 very confident psy9845 261 Q803F6::40S ribosomal protein SA ::Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis.::Danio rerio (taxid: 7955) confident COG0052::RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis] 99.95::19-95 PF00318::Ribosomal_S2 99.87::20-92 GO:0045335::phagocytic vesicle confident hh_2zkq_b_1::4-131 very confident psy14658 306 Q62941::Zinc transporter 2 ::Involved in accumulation of zinc in endosomal/lysosomal vesicles.::Rattus norvegicus (taxid: 10116) very confident COG0053::MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] 100.00::13-296 PF01545::Cation_efflux 100.00::23-293 GO:0005385::zinc ion transmembrane transporter activity confident hh_3h90_A_1::19-136,143-175,177-177,179-246,248-293 very confident psy1891 158 Q6PML9::Zinc transporter 9 ::Plays a role in the p160 coactivator signaling pathway that mediates transcriptional activation by nuclear receptors (By similarity). Plays a role in transcriptional activation of Wnt-responsive genes.::Homo sapiens (taxid: 9606) confident COG0053::MMT1 Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism] 99.94::4-158 PF01545::Cation_efflux 99.84::4-157 GO:0005856::cytoskeleton confident hh_3h90_A_1::5-76,78-92,130-158 confident psy6460 198 Q01859::ATP synthase subunit beta, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0055::AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] 100.00::5-197 PF00006::ATP-synt_ab 99.92::4-77 GO:0005811::lipid particle very confident hh_2ck3_D_1::5-25,27-196 very confident psy17544 266 Q01859::ATP synthase subunit beta, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0055::AtpD F0F1-type ATP synthase, beta subunit [Energy production and conversion] 100.00::52-265 PF00006::ATP-synt_ab 99.86::178-265 GO:0005929::cilium confident hh_2ck3_D_1::50-265 very confident psy2894 515 A1WF56::ATP synthase subunit alpha ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.::Verminephrobacter eiseniae (strain EF01-2) (taxid: 391735) very confident COG0056::AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] 100.00::1-513 PF00006::ATP-synt_ab 100.00::148-375 GO:0005618::cell wall very confident hh_3oaa_A_1::1-511 very confident psy5595 293 P31409::V-type proton ATPase subunit B ::Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) very confident COG0056::AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] 100.00::3-285 PF00006::ATP-synt_ab 100.00::47-262 GO:0005794::Golgi apparatus very confident rp_3gqb_B_1::38-43,46-88,91-237 very confident psy210 915 A4Y187::ATP synthase subunit beta ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.::Pseudomonas mendocina (strain ymp) (taxid: 399739) confident COG0056::AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] 100.00::113-588 PF00006::ATP-synt_ab 100.00::668-881 GO:0006933::negative regulation of cell adhesion involved in substrate-bound cell migration confident hh_1fx0_B_1::577-914 very confident psy2893 515 A1WF56::ATP synthase subunit alpha ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.::Verminephrobacter eiseniae (strain EF01-2) (taxid: 391735) very confident COG0056::AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] 100.00::1-513 PF00006::ATP-synt_ab 100.00::148-375 GO:0040007::growth very confident hh_3oaa_A_1::1-511 very confident psy13776 539 P25705::ATP synthase subunit alpha, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits. Subunit alpha does not bear the catalytic high-affinity ATP-binding sites.::Homo sapiens (taxid: 9606) confident COG0056::AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] 100.00::39-536 PF00006::ATP-synt_ab 100.00::192-443 GO:0046034::ATP metabolic process confident hh_1fx0_A_1::40-63,73-90,94-114,118-233,281-443,495-525,529-537 very confident psy13775 119 P25705::ATP synthase subunit alpha, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits. Subunit alpha does not bear the catalytic high-affinity ATP-binding sites.::Homo sapiens (taxid: 9606) confident COG0056::AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] 99.95::13-119 PF00306::ATP-synt_ab_C 99.22::13-80 GO:0016887::ATPase activity confident rp_2ck3_A_1::33-118 very confident psy13777 121 P25705::ATP synthase subunit alpha, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits. Subunit alpha does not bear the catalytic high-affinity ATP-binding sites.::Homo sapiens (taxid: 9606) confident COG0056::AtpA F0F1-type ATP synthase, alpha subunit [Energy production and conversion] 100.00::1-121 PF00306::ATP-synt_ab_C 99.85::1-82 GO:0042288::MHC class I protein binding confident rp_2ck3_A_1::1-120 very confident psy6888 69 P07487::Glyceraldehyde-3-phosphate dehydrogenase 2 ::::Drosophila melanogaster (taxid: 7227) confident COG0057::GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] 99.67::7-67 PF00044::Gp_dh_N 99.86::7-68 GO:0004365::glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity very confident hh_3e5r_O_1::7-65 very confident psy6887 70 P07487::Glyceraldehyde-3-phosphate dehydrogenase 2 ::::Drosophila melanogaster (taxid: 7227) confident COG0057::GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] 99.07::23-69 PF00044::Gp_dh_N 99.38::21-69 GO:0005829::cytosol confident hh_2b4r_O_1::22-69 very confident psy6886 146 P07487::Glyceraldehyde-3-phosphate dehydrogenase 2 ::::Drosophila melanogaster (taxid: 7227) very confident COG0057::GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] 100.00::1-146 PF02800::Gp_dh_C 100.00::55-146 GO:0005829::cytosol confident hh_1u8f_O_1::1-27,29-146 very confident psy6885 301 P07487::Glyceraldehyde-3-phosphate dehydrogenase 2 ::::Drosophila melanogaster (taxid: 7227) very confident COG0057::GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] 100.00::11-299 PF02800::Gp_dh_C 100.00::123-280 GO:0005829::cytosol very confident hh_3cps_A_1::11-300 very confident psy8544 364 P07487::Glyceraldehyde-3-phosphate dehydrogenase 2 ::::Drosophila melanogaster (taxid: 7227) very confident COG0057::GapA Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism] 100.00::2-332 PF02800::Gp_dh_C 100.00::155-312 GO:0005829::cytosol very confident hh_1u8f_O_1::1-332 very confident psy17283 635 Q0VCM4::Glycogen phosphorylase, liver form ::Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.::Bos taurus (taxid: 9913) portable COG0058::GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] 100.00::2-368 PF00343::Phosphorylase 100.00::2-373 GO:0005737::cytoplasm confident hh_2gj4_A_1::2-376 very confident psy17286 300 P79334::Glycogen phosphorylase, muscle form ::Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.::Bos taurus (taxid: 9913) confident COG0058::GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] 100.00::83-300 PF00343::Phosphorylase 100.00::175-300 GO:0008144::drug binding confident hh_2gj4_A_1::72-238,240-300 very confident psy17284 286 P79334::Glycogen phosphorylase, muscle form ::Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.::Bos taurus (taxid: 9913) confident COG0058::GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] 100.00::59-285 PF00343::Phosphorylase 100.00::75-285 GO:0043234::protein complex confident hh_2gj4_A_1::74-100,103-110,115-117,126-142,148-285 very confident psy17125 1281 B7HLM9::Isoleucine--tRNA ligase ::Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).::Bacillus cereus (strain AH187) (taxid: 405534) portable COG0060::IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::6-1038 PF00133::tRNA-synt_1 100.00::5-883 GO:0005739::mitochondrion confident hh_1wz2_A_1::19-119,121-187,195-247,505-506,508-534,537-586,589-589,591-599,601-720,726-744,746-809,811-830,860-908,912-913,915-960,962-972,982-1019,1025-1037 very confident psy15223 2492 A1K4R7::Isoleucine--tRNA ligase ::Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).::Azoarcus sp. (strain BH72) (taxid: 62928) confident COG0060::IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::438-1339 PF00133::tRNA-synt_1 100.00::437-1057 GO:0005829::cytosol confident rp_2b3j_A_1::57-114,116-193,196-201 very confident psy1869 205 O13651::Isoleucine--tRNA ligase, cytoplasmic ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0060::IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::3-205 PF00133::tRNA-synt_1 100.00::17-205 GO:0006428::isoleucyl-tRNA aminoacylation confident hh_1wz2_A_1::8-99,101-195 very confident psy944 689 A4G1V2::Valine--tRNA ligase ::Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.::Herminiimonas arsenicoxydans (taxid: 204773) portable COG0060::IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::205-670 PF00133::tRNA-synt_1 100.00::214-672 GO:0009987::cellular process confident hh_1wka_A_1::419-422,424-452,521-587,590-611,616-624 very confident psy961 118 P26640::Valine--tRNA ligase ::::Homo sapiens (taxid: 9606) confident COG0060::IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.88::14-117 PF08264::Anticodon_1 99.67::47-117 GO:0005829::cytosol confident hh_1gax_A_1::15-27,30-34,40-100,105-117 very confident psy5950 511 O95544::NAD kinase ::::Homo sapiens (taxid: 9606) confident COG0061::nadF NAD kinase [Coenzyme metabolism] 100.00::172-478 PF01513::NAD_kinase 100.00::173-459 GO:0005829::cytosol confident hh_3pfn_A_1::135-199,201-477 very confident psy16096 154 Q9W2Y3::NAD(P)H-hydrate epimerase ::Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.::Drosophila melanogaster (taxid: 7227) confident COG0062::Uncharacterized conserved protein [Function unknown] 100.00::2-126 PF03853::YjeF_N 99.97::2-112 GO:0005829::cytosol confident hh_2o8n_A_1::2-95,97-153 very confident psy3805 139 Q98ND3::Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B ::Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln).::Rhizobium loti (strain MAFF303099) (taxid: 266835) confident COG0064::GatB Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) [Translation, ribosomal structure and biogenesis] 100.00::1-136 PF02934::GatB_N 100.00::1-135 GO:0050567::glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity confident hh_3kfu_F_1::1-54,56-136 very confident psy12797 66 Q9C102::Putative glutamate synthase [NADPH] ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0067::GltB Glutamate synthase domain 1 [Amino acid transport and metabolism] 99.82::1-66 PF00310::GATase_2 99.85::1-66 GO:0005829::cytosol confident hh_1ea0_A_1::1-65 very confident psy12804 182 Q0JKD0::Glutamate synthase 1 [NADH], chloroplastic ::Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.::Oryza sativa subsp. japonica (taxid: 39947) portable COG0067::GltB Glutamate synthase domain 1 [Amino acid transport and metabolism] 100.00::31-175 PF00310::GATase_2 100.00::60-175 GO:0009536::plastid confident hh_1ea0_A_1::60-147,150-175 very confident psy12805 1429 Q0JKD0::Glutamate synthase 1 [NADH], chloroplastic ::Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0069::GltB Glutamate synthase domain 2 [Amino acid transport and metabolism] 100.00::222-700 PF01645::Glu_synthase 100.00::318-686 GO:0005829::cytosol confident hh_1ea0_A_1::10-296,300-349,351-705,708-723,725-727,730-761,763-820,846-1020 very confident psy12798 170 Q0JKD0::Glutamate synthase 1 [NADH], chloroplastic ::Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0069::GltB Glutamate synthase domain 2 [Amino acid transport and metabolism] 100.00::1-169 PF01645::Glu_synthase 100.00::1-169 GO:0009570::chloroplast stroma confident hh_1ea0_A_1::1-61,96-168 very confident psy10999 447 Q0JKD0::Glutamate synthase 1 [NADH], chloroplastic ::Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0069::GltB Glutamate synthase domain 2 [Amino acid transport and metabolism] 100.00::1-421 PF01645::Glu_synthase 100.00::16-410 GO:0009570::chloroplast stroma confident hh_1ea0_A_1::1-46,48-136,162-404,407-424,426-429,431-439 very confident psy14967 168 P82147::Protein lethal(2)essential for life ::Vital role in embryonic development.::Drosophila melanogaster (taxid: 7227) confident COG0071::IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.93::65-162 PF00011::HSP20 99.91::69-163 GO:0005634::nucleus confident hh_2wj5_A_1::67-164 very confident psy16256 74 P41316::Alpha-crystallin B chain ::May contribute to the transparency and refractive index of the lens.::Oryctolagus cuniculus (taxid: 9986) portable COG0071::IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.74::2-73 PF00011::HSP20 99.77::1-73 GO:0030018::Z disc confident hh_2klr_A_1::2-74 very confident psy6564 150 P41316::Alpha-crystallin B chain ::May contribute to the transparency and refractive index of the lens.::Oryctolagus cuniculus (taxid: 9986) confident COG0071::IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.88::2-99 PF00011::HSP20 99.90::3-100 GO:0032387::negative regulation of intracellular transport confident hh_2wj5_A_1::1-89 very confident psy8216 189 P82147::Protein lethal(2)essential for life ::Vital role in embryonic development.::Drosophila melanogaster (taxid: 7227) confident COG0071::IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.89::63-164 PF00011::HSP20 99.90::67-164 GO:0032387::negative regulation of intracellular transport confident hh_2klr_A_1::5-39,48-153,156-171 very confident psy4756 125 P82147::Protein lethal(2)essential for life ::Vital role in embryonic development.::Drosophila melanogaster (taxid: 7227) confident COG0071::IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.82::2-94 PF00011::HSP20 99.84::3-94 GO:0048523::negative regulation of cellular process confident hh_3q9p_A_1::3-80 very confident psy4755 147 Q7M2W6::Alpha-crystallin B chain ::May contribute to the transparency and refractive index of the lens.::Sus scrofa (taxid: 9823) confident COG0071::IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.88::16-114 PF00011::HSP20 99.87::17-114 GO:0048523::negative regulation of cellular process confident hh_2y1y_A_1::18-29,33-103 very confident psy11204 161 Q9CQ48::NudC domain-containing protein 2 ::::Mus musculus (taxid: 10090) confident COG0071::IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones] 97.54::16-97 PF04969::CS 99.74::19-94 GO:0005856::cytoskeleton confident hh_2rh0_A_1::6-85,87-98,100-109,113-157 very confident psy9573 809 Q8ZDX1::Phenylalanine--tRNA ligase beta subunit ::::Yersinia pestis (taxid: 632) confident COG0072::PheT Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis] 100.00::147-808 PF03483::B3_4 100.00::216-389 GO:0016020::membrane confident hh_2rhq_B_1::1-56,61-100,106-230,232-391,394-532,535-589,596-598,600-687,689-742,748-802,804-807 very confident psy18006 180 Q19713::Phenylalanine--tRNA ligase beta subunit ::::Caenorhabditis elegans (taxid: 6239) confident COG0072::PheT Phenylalanyl-tRNA synthetase beta subunit [Translation, ribosomal structure and biogenesis] 100.00::2-173 PF03484::B5 99.60::2-41 GO:0005829::cytosol confident hh_3l4g_B_1::2-165 very confident psy15305 153 P31230::Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 ::Non-catalytic component of the multisynthase complex. Stimulates the catalytic activity of cytoplasmic arginyl-tRNA synthase. Binds tRNA. Possesses inflammatory cytokine activity. Negatively regulates TGF-beta signaling through stabilization of SMURF2 by binding to SMURF2 and inhibiting its SMAD7-mediated degradation. Involved in glucose homeostasis through induction of glucagon secretion at low glucose levels. Promotes dermal fibroblast proliferation and wound repair. Regulates KDELR1-mediated retention of HSP90B1/gp96 in the endoplasmic reticulum. Plays a role in angiogenesis by inducing endothelial cell migration at low concentrations and endothelian cell apoptosis at high concentrations. Induces maturation of dendritic cells and monocyte cell adhesion. Modulates endothelial cell responses by degrading HIF-1A through interaction with PSMA7.::Mus musculus (taxid: 10090) confident COG0073::ARC1 EMAP domain [General function prediction only] 99.93::37-136 PF01588::tRNA_bind 99.92::49-134 GO:0000049::tRNA binding confident hh_1fl0_A_1::43-145 very confident psy15304 96 P31230::Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 ::Non-catalytic component of the multisynthase complex. Stimulates the catalytic activity of cytoplasmic arginyl-tRNA synthase. Binds tRNA. Possesses inflammatory cytokine activity. Negatively regulates TGF-beta signaling through stabilization of SMURF2 by binding to SMURF2 and inhibiting its SMAD7-mediated degradation. Involved in glucose homeostasis through induction of glucagon secretion at low glucose levels. Promotes dermal fibroblast proliferation and wound repair. Regulates KDELR1-mediated retention of HSP90B1/gp96 in the endoplasmic reticulum. Plays a role in angiogenesis by inducing endothelial cell migration at low concentrations and endothelian cell apoptosis at high concentrations. Induces maturation of dendritic cells and monocyte cell adhesion. Modulates endothelial cell responses by degrading HIF-1A through interaction with PSMA7.::Mus musculus (taxid: 10090) confident COG0073::ARC1 EMAP domain [General function prediction only] 97.92::1-34 PF01588::tRNA_bind 98.43::1-33 GO:0000049::tRNA binding confident hh_1fl0_A_1::1-81,83-96 very confident psy2025 213 Q44951::Methionine--tRNA ligase ::Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.::Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) (taxid: 224326) portable COG0073::ARC1 EMAP domain [General function prediction only] 99.88::23-126 PF01588::tRNA_bind 99.91::27-125 GO:0005737::cytoplasm confident hh_1ntg_A_1::26-33,36-107,109-181,185-190 very confident psy8894 306 Q94522::Succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial ::Catalyzes the ATP- or GTP-dependent ligation of succinate and CoA to form succinyl-CoA. The nature of the beta subunit determines the nucleotide specificity.::Drosophila melanogaster (taxid: 7227) very confident COG0074::SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion] 100.00::23-303 PF13607::Succ_CoA_lig 100.00::168-298 GO:0006104::succinyl-CoA metabolic process very confident hh_2nu8_A_1::25-131,133-300 very confident psy8011 102 A6QM00::Glutamate decarboxylase-like protein 1 ::::Bos taurus (taxid: 9913) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 99.54::22-101 PF00282::Pyridoxal_deC 99.91::13-101 GO:0004351::glutamate decarboxylase activity confident rp_2jis_A_1::26-102 very confident psy12303 480 P20228::Glutamate decarboxylase ::Catalyzes the production of GABA.::Drosophila melanogaster (taxid: 7227) very confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::14-474 PF00282::Pyridoxal_deC 100.00::35-404 GO:0004351::glutamate decarboxylase activity very confident hh_2jis_A_1::3-166,168-275,277-384,386-480 very confident psy14299 448 Q5IS68::Glutamate decarboxylase 1 ::Catalyzes the production of GABA.::Pan troglodytes (taxid: 9598) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::2-436 PF00282::Pyridoxal_deC 100.00::3-356 GO:0004351::glutamate decarboxylase activity confident hh_2jis_A_1::3-237,319-343,345-401,404-412,414-435 very confident psy14030 63 Q5IS68::Glutamate decarboxylase 1 ::Catalyzes the production of GABA.::Pan troglodytes (taxid: 9598) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 99.84::1-62 PF00282::Pyridoxal_deC 99.88::1-62 GO:0004351::glutamate decarboxylase activity confident hh_2okj_A_1::2-62 very confident psy1785 629 Q9Y600::Cysteine sulfinic acid decarboxylase ::::Homo sapiens (taxid: 9606) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::188-624 PF00282::Pyridoxal_deC 100.00::180-553 GO:0004351::glutamate decarboxylase activity confident hh_2jis_A_1::78-105,107-133,189-413,422-430,432-540,542-629 very confident psy3048 367 P14173::Aromatic-L-amino-acid decarboxylase ::Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.::Rattus norvegicus (taxid: 10116) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::1-310 PF00282::Pyridoxal_deC 100.00::1-291 GO:0005829::cytosol confident hh_1js3_A_1::2-187,189-195,224-355 very confident psy13453 764 P18486::Alpha-methyldopa hypersensitive protein ::Participates in catecholamine metabolism. It plays a vital role in cuticle development.::Drosophila melanogaster (taxid: 7227) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::466-764 PF00282::Pyridoxal_deC 100.00::484-764 GO:0005829::cytosol confident hh_1js3_A_1::450-764 very confident psy9815 119 P23738::Histidine decarboxylase ::::Mus musculus (taxid: 10090) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 98.89::14-81 PF00282::Pyridoxal_deC 99.59::11-82 GO:0005829::cytosol confident hh_4e1o_A_1::3-80 very confident psy1678 297 P05031::Aromatic-L-amino-acid decarboxylase ::Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine. Variation in the synthesis of bioamines may be a factor contributing to natural variation in life span.::Drosophila melanogaster (taxid: 7227) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 99.97::76-291 PF00282::Pyridoxal_deC 100.00::93-297 GO:0043025::neuronal cell body confident hh_3k40_A_1::17-52,95-273,275-297 very confident psy9810 154 P14173::Aromatic-L-amino-acid decarboxylase ::Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.::Rattus norvegicus (taxid: 10116) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 99.41::2-69 PF00282::Pyridoxal_deC 99.77::1-67 GO:0043025::neuronal cell body confident hh_1js3_A_1::2-68 very confident psy9807 561 P14173::Aromatic-L-amino-acid decarboxylase ::Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.::Rattus norvegicus (taxid: 10116) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::33-553 PF00282::Pyridoxal_deC 100.00::51-426 GO:0043025::neuronal cell body confident hh_3k40_A_1::17-227,229-240,243-426,494-556 very confident psy1596 375 Q05733::Histidine decarboxylase ::Required in photoreceptor transmitter synthesis.::Drosophila melanogaster (taxid: 7227) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::5-375 PF00282::Pyridoxal_deC 100.00::2-375 GO:0043025::neuronal cell body confident hh_1js3_A_1::3-17,20-20,23-26,31-78,103-109,164-178,188-194,198-375 very confident psy3051 111 P18486::Alpha-methyldopa hypersensitive protein ::Participates in catecholamine metabolism. It plays a vital role in cuticle development.::Drosophila melanogaster (taxid: 7227) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 98.75::17-111 PF00282::Pyridoxal_deC 99.70::35-110 GO:0050896::response to stimulus confident hh_1js3_A_1::1-110 very confident psy10210 435 Q9V7Y2::Sphingosine-1-phosphate lyase ::Cleaves phosphorylated sphingoid bases (PSBs), such as sphingosine-1-phosphate, into fatty aldehydes and phosphoethanolamine. Sphingolipid catabolism is required for normal development including viability, reproduction and muscle development.::Drosophila melanogaster (taxid: 7227) confident COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::102-429 PF00282::Pyridoxal_deC 100.00::103-428 GO:0050896::response to stimulus confident hh_3mc6_A_1::71-432 very confident psy11047 943 P20711::Aromatic-L-amino-acid decarboxylase ::Catalyzes the decarboxylation of L-3,4-dihydroxyphenylalanine (DOPA) to dopamine, L-5-hydroxytryptophan to serotonin and L-tryptophan to tryptamine.::Homo sapiens (taxid: 9606) portable COG0076::GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism] 100.00::134-695 PF00282::Pyridoxal_deC 100.00::153-636 GO:1901605::alpha-amino acid metabolic process confident hh_1js3_A_1::119-252,254-322,324-378,399-405,413-423,425-426,462-551,603-698 very confident psy4411 99 A0KQG0::Aspartate carbamoyltransferase ::::Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) (taxid: 380703) portable COG0078::ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism] 99.97::1-98 PF00185::OTCace 99.46::39-98 GO:0006541::glutamine metabolic process confident hh_1ml4_A_1::1-98 very confident psy39 195 Q9Y3B7::39S ribosomal protein L11, mitochondrial ::::Homo sapiens (taxid: 9606) very confident COG0080::RplK Ribosomal protein L11 [Translation, ribosomal structure and biogenesis] 100.00::20-157 PF00298::Ribosomal_L11 99.95::85-155 GO:0005762::mitochondrial large ribosomal subunit confident hh_3egv_B_1::18-62,64-129,132-157 very confident psy15220 289 A4JAM8::50S ribosomal protein L11 ::This protein binds directly to 23S ribosomal RNA.::Burkholderia vietnamiensis (strain G4 / LMG 22486) (taxid: 269482) confident COG0080::RplK Ribosomal protein L11 [Translation, ribosomal structure and biogenesis] 100.00::2-143 PF00298::Ribosomal_L11 99.94::72-140 GO:0009570::chloroplast stroma confident hh_3egv_B_1::3-50,52-146 very confident psy13547 165 P35979::60S ribosomal protein L12 ::Binds directly to 26S ribosomal RNA.::Mus musculus (taxid: 10090) very confident COG0080::RplK Ribosomal protein L11 [Translation, ribosomal structure and biogenesis] 100.00::9-146 PF03946::Ribosomal_L11_N 99.94::12-69 GO:0005811::lipid particle very confident no hit no match psy16349 351 Q9BYD6::39S ribosomal protein L1, mitochondrial ::::Homo sapiens (taxid: 9606) portable COG0081::RplA Ribosomal protein L1 [Translation, ribosomal structure and biogenesis] 100.00::91-321 PF00687::Ribosomal_L1 99.97::118-314 GO:0005739::mitochondrion confident hh_2ftc_A_1::124-133,136-152,155-195,199-253,260-296,300-314,316-325 very confident psy8483 161 P53027::60S ribosomal protein L10a (Fragment) ::::Sus scrofa (taxid: 9823) very confident COG0081::RplA Ribosomal protein L1 [Translation, ribosomal structure and biogenesis] 100.00::5-161 PF00687::Ribosomal_L1 99.96::23-160 GO:0022625::cytosolic large ribosomal subunit very confident hh_3iz5_A_1::2-161 very confident psy4674 173 Q91YE3::Egl nine homolog 1 ::Cellular oxygen sensor that catalyzes, under normoxic conditions, the post-translational formation of 4-hydroxyproline in hypoxia-inducible factor (HIF) alpha proteins. Hydroxylates a specific proline found in each of the oxygen-dependent degradation (ODD) domains (N-terminal, NODD, and C-terminal, CODD) of HIF1A. Also hydroxylates HIF2A. Has a preference for the CODD site for both HIF1A and HIF2A. Hydroxylated HIFs are then targeted for proteasomal degradation via the von Hippel-Lindau ubiquitination complex. Under hypoxic conditions, the hydroxylation reaction is attenuated allowing HIFs to escape degradation resulting in their translocation to the nucleus, heterodimerization with HIF1B, and increased expression of hypoxy-inducible genes. EGLN1 is the most important isozyme under normoxia and, through regulating the stability of HIF1, involved in various hypoxia-influenced processes such as angiogenesis in retinal and cardiac functionality.::Mus musculus (taxid: 10090) portable COG0084::TatD Mg-dependent DNase [DNA replication, recombination, and repair] 99.83::46-173 PF01026::TatD_DNase 99.54::42-173 GO:0005829::cytosol confident hh_1xwy_A_1::79-96,99-115,122-148,151-173 confident psy7584 67 P08266::DNA-directed RNA polymerase II subunit RPB2 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template.::Drosophila melanogaster (taxid: 7227) very confident COG0085::RpoB DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] 99.83::12-67 PF00562::RNA_pol_Rpb2_6 99.81::11-67 GO:0005665::DNA-directed RNA polymerase II, core complex very confident hh_3h0g_B_1::8-67 very confident psy7583 451 P08266::DNA-directed RNA polymerase II subunit RPB2 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template.::Drosophila melanogaster (taxid: 7227) confident COG0085::RpoB DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] 100.00::1-450 PF00562::RNA_pol_Rpb2_6 100.00::1-357 GO:0005730::nucleolus very confident hh_3h0g_B_1::1-50,96-282,284-450 very confident psy8410 951 Q9P7X8::Probable DNA-directed RNA polymerase I subunit RPA2 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest core component of RNA polymerase I which synthesizes ribosomal RNA precursors. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol I is composed of mobile elements and RPA2 is part of the core element with the central large cleft and probably a clamp element that moves to open and close the cleft.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0085::RpoB DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] 100.00::47-951 PF00562::RNA_pol_Rpb2_6 100.00::652-951 GO:0005737::cytoplasm confident hh_3h0g_B_1::63-122,125-223,229-307,310-310,312-424,428-455,457-508,512-551,554-570,572-584,592-767,772-775,804-879,881-881,886-951 very confident psy8847 3080 A9IJ22::DNA-directed RNA polymerase subunit beta' ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.::Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) (taxid: 340100) confident COG0085::RpoB DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] 100.00::401-1707 PF00562::RNA_pol_Rpb2_6 100.00::1060-1678 GO:0005829::cytosol confident hh_3lu0_C_1::397-436,441-630,632-654,656-1379,1388-1389,1392-1606,1616-1620,1622-1708 very confident psy4067 1384 O28392::DNA-directed RNA polymerase subunit B' ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. The B (B''+B' and beta) subunits have been implicated in DNA promoter recognition and also in nucleotide binding.::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) portable COG0085::RpoB DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] 100.00::52-1377 PF00562::RNA_pol_Rpb2_6 100.00::909-1372 GO:0006351::transcription, DNA-dependent confident hh_3lu0_C_1::477-591,610-620,650-655,688-742,757-781,798-808,830-872,914-923,955-1031,1041-1080,1085-1108,1136-1144,1162-1377 very confident psy7582 661 P08266::DNA-directed RNA polymerase II subunit RPB2 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template.::Drosophila melanogaster (taxid: 7227) very confident COG0085::RpoB DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription] 100.00::3-648 PF04563::RNA_pol_Rpb2_1 100.00::18-180 GO:0005730::nucleolus very confident hh_3h0g_B_1::1-225,231-547,549-603,606-606,621-625,628-660 very confident psy1131 353 P04052::DNA-directed RNA polymerase II subunit RPB1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB1 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template. At the start of transcription, a single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol II. A bridging helix emanates from RPB1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol II by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition. During transcription elongation, Pol II moves on the template as the transcript elongates. Elongation is influenced by the phosphorylation status of the C-terminal domain (CTD) of Pol II largest subunit (RPB1), which serves as a platform for assembly of factors that regulate transcription initiation, elongation, termination and mRNA processing.::Drosophila melanogaster (taxid: 7227) very confident COG0086::RpoC DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] 100.00::44-245 PF00623::RNA_pol_Rpb1_2 100.00::82-206 GO:0005703::polytene chromosome puff very confident hh_3h0g_A_2::142-173,175-176,184-208,215-226,228-353 very confident psy3023 392 P04052::DNA-directed RNA polymerase II subunit RPB1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB1 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template. At the start of transcription, a single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol II. A bridging helix emanates from RPB1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol II by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition. During transcription elongation, Pol II moves on the template as the transcript elongates. Elongation is influenced by the phosphorylation status of the C-terminal domain (CTD) of Pol II largest subunit (RPB1), which serves as a platform for assembly of factors that regulate transcription initiation, elongation, termination and mRNA processing.::Drosophila melanogaster (taxid: 7227) confident COG0086::RpoC DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] 100.00::12-392 PF04997::RNA_pol_Rpb1_1 100.00::11-346 GO:0005703::polytene chromosome puff confident hh_3h0g_A_1::3-33,36-127,130-160,165-235,242-392 very confident psy16766 621 O95602::DNA-directed RNA polymerase I subunit RPA1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic core component of RNA polymerase I which synthesizes ribosomal RNA precursors. Forms the polymerase active center together with the second largest subunit. A single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol I. A bridging helix emanates from RPA1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol I by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition.::Homo sapiens (taxid: 9606) portable COG0086::RpoC DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] 100.00::119-596 PF04997::RNA_pol_Rpb1_1 100.00::119-524 GO:0044424::intracellular part confident hh_3h0g_A_1::113-166,168-228,230-263,284-289,305-338,344-345,354-354,356-356,359-388,396-450,454-455,472-494,497-602 very confident psy16767 1020 Q980R2::DNA-directed RNA polymerase subunit A' ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.::Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (taxid: 273057) portable COG0086::RpoC DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] 100.00::1-435 PF04998::RNA_pol_Rpb1_5 100.00::361-963 GO:0005634::nucleus confident hh_3h0g_A_1::1-67,69-74,77-100,105-107,111-113,117-121,123-125,135-235,252-286,291-433,437-452,458-501,514-619,621-693,696-711,731-731,741-747,765-770,774-781,784-795,798-798,806-806,808-810,823-846,852-853,858-882,884-1014 very confident psy3022 258 P04052::DNA-directed RNA polymerase II subunit RPB1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB1 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template. At the start of transcription, a single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol II. A bridging helix emanates from RPB1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol II by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition. During transcription elongation, Pol II moves on the template as the transcript elongates. Elongation is influenced by the phosphorylation status of the C-terminal domain (CTD) of Pol II largest subunit (RPB1), which serves as a platform for assembly of factors that regulate transcription initiation, elongation, termination and mRNA processing.::Drosophila melanogaster (taxid: 7227) very confident COG0086::RpoC DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] 99.84::2-131 PF04998::RNA_pol_Rpb1_5 100.00::101-211 GO:0005703::polytene chromosome puff very confident hh_3h0g_A_1::2-234 very confident psy16768 154 O95602::DNA-directed RNA polymerase I subunit RPA1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic core component of RNA polymerase I which synthesizes ribosomal RNA precursors. Forms the polymerase active center together with the second largest subunit. A single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol I. A bridging helix emanates from RPA1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol I by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition.::Homo sapiens (taxid: 9606) confident COG0086::RpoC DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] 98.38::5-122 PF04998::RNA_pol_Rpb1_5 99.88::3-92 GO:0005829::cytosol confident hh_3h0g_A_1::5-22,24-126 very confident psy6965 1764 Q976A6::DNA-directed RNA polymerase subunit A'' ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.::Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) (taxid: 273063) portable COG0086::RpoC DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription] 99.29::1531-1679 PF04998::RNA_pol_Rpb1_5 99.87::1531-1629 GO:0044446::intracellular organelle part confident hh_3h0g_A_1::1386-1398,1401-1408,1419-1441,1444-1472,1474-1474,1477-1512,1518-1682 very confident psy16477 172 P39023::60S ribosomal protein L3 ::The L3 protein is a component of the large subunit of cytoplasmic ribosomes.::Homo sapiens (taxid: 9606) confident COG0087::RplC Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] 99.88::28-151 PF00297::Ribosomal_L3 99.95::15-151 GO:0005618::cell wall confident hh_2zkr_b_1::4-11,14-39,46-118 very confident psy451 296 P18665::39S ribosomal protein L3, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident COG0087::RplC Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] 100.00::117-296 PF00297::Ribosomal_L3 100.00::124-296 GO:0005739::mitochondrion confident hh_2ftc_C_1::117-159,171-278,280-296 very confident psy16472 630 Q759R7::60S ribosomal protein L3 ::::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG0087::RplC Ribosomal protein L3 [Translation, ribosomal structure and biogenesis] 100.00::80-556 PF00297::Ribosomal_L3 100.00::87-550 GO:0071353::cellular response to interleukin-4 confident hh_2zkr_b_1::38-205,242-244,312-438,501-556,559-594 very confident psy5946 63 Q32PI6::39S ribosomal protein L4, mitochondrial ::::Bos taurus (taxid: 9913) confident COG0088::RplD Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] 99.01::2-58 PF00573::Ribosomal_L4 99.39::2-55 GO:0005739::mitochondrion confident hh_2ftc_D_1::2-55 very confident psy13118 286 Q58DW0::60S ribosomal protein L4 ::::Bos taurus (taxid: 9913) confident COG0088::RplD Ribosomal protein L4 [Translation, ribosomal structure and biogenesis] 100.00::20-283 PF00573::Ribosomal_L4 99.97::37-273 GO:0005774::vacuolar membrane confident hh_2zkr_c_1::16-107,172-172,191-286 very confident psy6375 86 A9A9B6::50S ribosomal protein L23P ::Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome.::Methanococcus maripaludis (strain C6 / ATCC BAA-1332) (taxid: 444158) very confident COG0089::RplW Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] 99.97::3-81 PF00276::Ribosomal_L23 99.97::4-82 GO:0005618::cell wall confident hh_2zkr_s_1::1-86 very confident psy6374 305 P62751::60S ribosomal protein L23a ::This protein binds to a specific region on the 26S rRNA.::Mus musculus (taxid: 10090) confident COG0089::RplW Ribosomal protein L23 [Translation, ribosomal structure and biogenesis] 99.91::222-304 PF00276::Ribosomal_L23 99.89::223-301 GO:0016020::membrane confident hh_2zkr_s_1::161-305 very confident psy13959 248 P62918::60S ribosomal protein L8 ::::Mus musculus (taxid: 10090) very confident COG0090::RplB Ribosomal protein L2 [Translation, ribosomal structure and biogenesis] 100.00::1-245 PF03947::Ribosomal_L2_C 100.00::96-231 GO:0022625::cytosolic large ribosomal subunit very confident hh_3jyw_B_1::2-244 very confident psy7141 215 Q9VXB5::39S ribosomal protein L22, mitochondrial ::::Drosophila melanogaster (taxid: 7227) very confident COG0091::RplV Ribosomal protein L22 [Translation, ribosomal structure and biogenesis] 100.00::65-182 PF00237::Ribosomal_L22 100.00::76-180 GO:0005762::mitochondrial large ribosomal subunit confident hh_2ftc_M_1::75-184 very confident psy11361 200 Q29IM3::60S ribosomal protein L17 ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG0091::RplV Ribosomal protein L22 [Translation, ribosomal structure and biogenesis] 100.00::4-169 PF00237::Ribosomal_L22 100.00::17-167 GO:0022625::cytosolic large ribosomal subunit very confident hh_2zkr_r_1::1-134,150-195 very confident psy17945 214 P23396::40S ribosomal protein S3 ::::Homo sapiens (taxid: 9606) confident COG0092::RpsC Ribosomal protein S3 [Translation, ribosomal structure and biogenesis] 99.94::1-94 PF00189::Ribosomal_S3_C 99.81::1-62 GO:0016363::nuclear matrix confident hh_2zkq_c_1::1-101 very confident psy8115 218 P23396::40S ribosomal protein S3 ::::Homo sapiens (taxid: 9606) confident COG0092::RpsC Ribosomal protein S3 [Translation, ribosomal structure and biogenesis] 100.00::81-207 PF07650::KH_2 99.60::95-171 GO:0009506::plasmodesma very confident hh_2zkq_c_1::76-207 very confident psy17938 307 P23396::40S ribosomal protein S3 ::::Homo sapiens (taxid: 9606) confident COG0092::RpsC Ribosomal protein S3 [Translation, ribosomal structure and biogenesis] 100.00::2-154 PF14910::MMS22L_N 100.00::141-290 GO:0009506::plasmodesma very confident hh_2zkq_c_1::2-123,136-151,153-155 very confident psy6163 137 P62830::60S ribosomal protein L23 ::::Mus musculus (taxid: 10090) very confident COG0093::RplN Ribosomal protein L14 [Translation, ribosomal structure and biogenesis] 100.00::19-133 PF00238::Ribosomal_L14 100.00::19-133 GO:0022625::cytosolic large ribosomal subunit very confident hh_3u5e_V_1::5-133 very confident psy6164 64 P62830::60S ribosomal protein L23 ::::Mus musculus (taxid: 10090) confident COG0093::RplN Ribosomal protein L14 [Translation, ribosomal structure and biogenesis] 99.26::19-48 PF00238::Ribosomal_L14 99.03::19-46 GO:0022625::cytosolic large ribosomal subunit very confident hh_3u5e_V_1::6-56 very confident psy2667 261 Q8FA49::Lipoate-protein ligase A ::Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) portable COG0095::LplA Lipoate-protein ligase A [Coenzyme metabolism] 100.00::53-260 PF03099::BPL_LplA_LipB 99.81::96-249 GO:0005737::cytoplasm confident hh_2e5a_A_1::52-159,161-165,207-223,225-260 very confident psy13246 81 P42798::40S ribosomal protein S15a-1 ::::Arabidopsis thaliana (taxid: 3702) confident COG0096::RpsH Ribosomal protein S8 [Translation, ribosomal structure and biogenesis] 99.95::1-75 PF00410::Ribosomal_S8 99.80::5-75 GO:0005618::cell wall confident hh_2xzm_H_1::1-75 very confident psy13245 130 P48149::40S ribosomal protein S15Aa ::::Drosophila melanogaster (taxid: 7227) very confident COG0096::RpsH Ribosomal protein S8 [Translation, ribosomal structure and biogenesis] 100.00::1-130 PF00410::Ribosomal_S8 100.00::5-130 GO:0022627::cytosolic small ribosomal subunit very confident hh_2xzm_H_1::1-24,26-130 very confident psy7622 179 P50882::60S ribosomal protein L9 ::::Drosophila melanogaster (taxid: 7227) very confident COG0097::RplF Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis] 100.00::5-161 PF00347::Ribosomal_L6 99.38::5-59 GO:0005730::nucleolus very confident hh_2zkr_e_1::4-109,111-149,155-167 very confident psy7621 247 P50882::60S ribosomal protein L9 ::::Drosophila melanogaster (taxid: 7227) confident COG0097::RplF Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis] 100.00::7-242 PF00347::Ribosomal_L6 99.17::21-73 GO:0005730::nucleolus very confident hh_2zkr_e_1::8-72,143-247 very confident psy7620 189 P50882::60S ribosomal protein L9 ::::Drosophila melanogaster (taxid: 7227) very confident COG0097::RplF Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis] 100.00::1-184 PF00347::Ribosomal_L6 99.79::12-85 GO:0022625::cytosolic large ribosomal subunit very confident hh_2zkr_e_1::1-49,51-188 very confident psy8860 374 A9IHT3::50S ribosomal protein L6 ::This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.::Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) (taxid: 340100) confident COG0097::RplF Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis] 100.00::118-284 PF00410::Ribosomal_S8 100.00::5-126 GO:0005634::nucleus confident hh_3bbo_Q_1::270-315,317-318,320-374 very confident psy4335 152 P46791::40S ribosomal protein S2 (Fragment) ::::Cricetulus griseus (taxid: 10029) very confident COG0098::RpsE Ribosomal protein S5 [Translation, ribosomal structure and biogenesis] 100.00::8-151 PF00333::Ribosomal_S5 99.94::38-104 GO:0005618::cell wall very confident hh_3iz6_E_1::4-35,37-151 very confident psy12294 123 O74892::40S ribosomal protein S2 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0098::RpsE Ribosomal protein S5 [Translation, ribosomal structure and biogenesis] 99.96::17-108 PF03719::Ribosomal_S5_C 99.91::29-92 GO:0005618::cell wall very confident hh_3iz6_E_1::15-119 very confident psy10165 337 Q5REJ1::28S ribosomal protein S5, mitochondrial ::::Pongo abelii (taxid: 9601) confident COG0098::RpsE Ribosomal protein S5 [Translation, ribosomal structure and biogenesis] 100.00::133-292 PF03719::Ribosomal_S5_C 99.94::212-285 GO:0043229::intracellular organelle confident hh_1pkp_A_1::134-151,153-204,206-277 very confident psy1365 140 P62272::40S ribosomal protein S18 ::Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA.::Sus scrofa (taxid: 9823) very confident COG0099::RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis] 100.00::1-140 PF00416::Ribosomal_S13 100.00::1-130 GO:0005618::cell wall very confident hh_3iz6_M_1::1-85,89-140 very confident psy8858 121 A6T3I1::30S ribosomal protein S13 ::Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) very confident COG0099::RpsM Ribosomal protein S13 [Translation, ribosomal structure and biogenesis] 100.00::1-120 PF00416::Ribosomal_S13 100.00::3-108 GO:0022627::cytosolic small ribosomal subunit very confident hh_3bbn_M_1::1-39,41-59,70-111 very confident psy3230 151 Q7QEH1::40S ribosomal protein S14a ::::Anopheles gambiae (taxid: 7165) very confident COG0100::RpsK Ribosomal protein S11 [Translation, ribosomal structure and biogenesis] 100.00::21-148 PF00411::Ribosomal_S11 100.00::29-147 GO:0005811::lipid particle very confident hh_2xzm_K_1::1-8,10-151 very confident psy13610 123 Q2FW31::30S ribosomal protein S11 ::Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.::Staphylococcus aureus (strain NCTC 8325) (taxid: 93061) confident COG0100::RpsK Ribosomal protein S11 [Translation, ribosomal structure and biogenesis] 100.00::23-114 PF00411::Ribosomal_S11 100.00::26-114 GO:0022627::cytosolic small ribosomal subunit confident hh_3bbn_K_1::23-114 very confident psy8857 133 Q46WG7::30S ribosomal protein S11 ::Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome.::Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) (taxid: 264198) very confident COG0100::RpsK Ribosomal protein S11 [Translation, ribosomal structure and biogenesis] 100.00::13-133 PF00411::Ribosomal_S11 100.00::23-132 GO:0022627::cytosolic small ribosomal subunit very confident hh_3bbn_K_1::17-133 very confident psy12402 375 Q4KM92::tRNA pseudouridine synthase A, mitochondrial ::Converts specific uridines to PSI in a number of tRNA substrates. Acts on positions 27/28 in the anticodon stem and also positions 34 and 36 in the anticodon of an intron containing tRNA. Involved in regulation of nuclear receptor activity possibly through pseudouridylation of SRA1 RNA.::Rattus norvegicus (taxid: 10116) confident COG0101::TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis] 100.00::1-265 PF01416::PseudoU_synth_1 99.84::154-260 GO:0005737::cytoplasm confident no hit no match psy13081 335 Q12VJ7::tRNA pseudouridine synthase A ::Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.::Methanococcoides burtonii (strain DSM 6242) (taxid: 259564) confident COG0101::TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis] 100.00::1-262 PF01416::PseudoU_synth_1 99.89::141-257 GO:0005829::cytosol confident hh_1dj0_A_1::1-23,25-40,45-76,86-159,162-178,189-235,238-257,259-263 very confident psy9430 255 O42848::60S ribosomal protein L16-A ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0102::RplM Ribosomal protein L13 [Translation, ribosomal structure and biogenesis] 100.00::72-206 PF00572::Ribosomal_L13 100.00::86-201 GO:0005615::extracellular space confident hh_4a17_I_1::83-252 very confident psy6291 79 Q3SYS1::39S ribosomal protein L13, mitochondrial ::::Bos taurus (taxid: 9913) portable COG0102::RplM Ribosomal protein L13 [Translation, ribosomal structure and biogenesis] 99.33::2-36 PF00572::Ribosomal_L13 99.35::2-36 GO:0005739::mitochondrion confident hh_2ftc_H_1::2-48 very confident psy6284 270 Q9VJ38::39S ribosomal protein L13, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0102::RplM Ribosomal protein L13 [Translation, ribosomal structure and biogenesis] 99.95::9-107 PF00572::Ribosomal_L13 99.93::17-107 GO:0005761::mitochondrial ribosome confident hh_2ftc_H_1::1-107 very confident psy6264 120 Q9VJ38::39S ribosomal protein L13, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0102::RplM Ribosomal protein L13 [Translation, ribosomal structure and biogenesis] 99.98::1-87 PF00572::Ribosomal_L13 99.97::1-84 GO:0005761::mitochondrial ribosome confident hh_2ftc_H_1::1-89 very confident psy8077 223 P14131::40S ribosomal protein S16 ::::Mus musculus (taxid: 10090) confident COG0103::RpsI Ribosomal protein S9 [Translation, ribosomal structure and biogenesis] 100.00::28-202 PF00380::Ribosomal_S9 100.00::33-202 GO:0005618::cell wall confident hh_3iz6_I_1::25-65,110-202 very confident psy6189 539 Q9D7N3::28S ribosomal protein S9, mitochondrial ::::Mus musculus (taxid: 10090) confident COG0103::RpsI Ribosomal protein S9 [Translation, ribosomal structure and biogenesis] 100.00::414-539 PF00380::Ribosomal_S9 100.00::417-539 GO:0005739::mitochondrion confident hh_3bbn_I_1::415-429,431-498,500-539 very confident psy9398 154 A6SUN8::30S ribosomal protein S9 ::::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0103::RpsI Ribosomal protein S9 [Translation, ribosomal structure and biogenesis] 99.97::71-154 PF00572::Ribosomal_L13 99.97::2-92 GO:0005840::ribosome confident hh_3iz6_I_1::71-104,106-154 very confident psy3917 295 Q9Y0Y2::Adenylosuccinate synthetase ::Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP.::Drosophila melanogaster (taxid: 7227) confident COG0104::PurA Adenylosuccinate synthase [Nucleotide transport and metabolism] 100.00::41-292 PF00709::Adenylsucc_synt 100.00::43-292 GO:0005829::cytosol confident hh_2v40_A_1::36-292 very confident psy6076 188 Q39839::Nucleoside diphosphate kinase 1 ::Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.::Glycine max (taxid: 3847) confident COG0105::Ndk Nucleoside diphosphate kinase [Nucleotide transport and metabolism] 100.00::23-147 PF00334::NDK 100.00::24-139 GO:0004550::nucleoside diphosphate kinase activity very confident hh_3l7u_A_1::19-140 very confident psy8252 129 A4Y7C9::Nucleoside diphosphate kinase ::Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.::Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) (taxid: 319224) confident COG0105::Ndk Nucleoside diphosphate kinase [Nucleotide transport and metabolism] 100.00::3-124 PF00334::NDK 100.00::3-127 GO:0005856::cytoskeleton confident hh_1pku_A_1::3-9,11-84,88-122,124-127 very confident psy10009 235 Q05982::Nucleoside diphosphate kinase A ::Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. Possesses nucleoside-diphosphate kinase, serine/threonine-specific protein kinase, geranyl and farnesyl pyrophosphate kinase, histidine protein kinase and 3'-5' exonuclease activities. Involved in cell proliferation, differentiation and development, signal transduction, G protein-coupled receptor endocytosis, and gene expression. Required for neural development including neural patterning and cell fate determination.::Rattus norvegicus (taxid: 10116) confident COG0105::Ndk Nucleoside diphosphate kinase [Nucleotide transport and metabolism] 100.00::100-219 PF00334::NDK 99.97::100-222 GO:0005882::intermediate filament confident hh_4fkx_A_1::99-113,121-235 very confident psy5168 113 Q2EN76::Nucleoside diphosphate kinase B ::Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. Negatively regulates Rho activity by interacting with AKAP13/LBC. Exhibits histidine protein kinase activity.::Sus scrofa (taxid: 9823) confident COG0105::Ndk Nucleoside diphosphate kinase [Nucleotide transport and metabolism] 100.00::5-112 PF00334::NDK 100.00::6-112 GO:0005882::intermediate filament confident hh_4fkx_A_1::4-112 very confident psy1618 178 B3Q9R4::Nucleoside diphosphate kinase ::Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.::Rhodopseudomonas palustris (strain TIE-1) (taxid: 395960) confident COG0105::Ndk Nucleoside diphosphate kinase [Nucleotide transport and metabolism] 100.00::48-178 PF00334::NDK 100.00::49-178 GO:0045839::negative regulation of mitosis confident hh_4fkx_A_1::47-95,98-143,147-178 very confident psy2382 527 Q882G0::3,4-dihydroxy-2-butanone 4-phosphate synthase ::Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.::Pseudomonas syringae pv. tomato (strain DC3000) (taxid: 223283) confident COG0108::RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] 100.00::5-206 PF00926::DHBP_synthase 100.00::9-202 GO:0044446::intracellular organelle part confident hh_1g57_A_1::6-208 very confident psy1910 153 Q298G6::4-hydroxybenzoate polyprenyltransferase, mitochondrial ::Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0109::CyoE Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones] 100.00::2-153 PF01040::UbiA 99.88::10-152 GO:0004659::prenyltransferase activity confident no hit no match psy13659 306 Q13CY5::Protoheme IX farnesyltransferase ::Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.::Rhodopseudomonas palustris (strain BisB5) (taxid: 316057) confident COG0109::CyoE Polyprenyltransferase (cytochrome oxidase assembly factor) [Posttranslational modification, protein turnover, chaperones] 100.00::2-261 PF01040::UbiA 99.96::9-185 GO:0006784::heme a biosynthetic process confident rp_1vt4_I_1::94-124,129-229,231-249 portable psy6348 333 B1L765::Glyoxylate reductase ::::Korarchaeum cryptofilum (strain OPF8) (taxid: 374847) confident COG0111::SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] 100.00::1-283 PF02826::2-Hacid_dh_C 100.00::64-241 GO:0005829::cytosol confident hh_2g76_A_1::1-222,226-266 very confident psy13054 1128 B1L765::Glyoxylate reductase ::::Korarchaeum cryptofilum (strain OPF8) (taxid: 374847) portable COG0111::SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] 100.00::844-1124 PF02826::2-Hacid_dh_C 100.00::917-1097 GO:0005829::cytosol confident hh_2gcg_A_1::845-943,946-1128 very confident psy7383 501 Q9Z2F5::C-terminal-binding protein 1 ::Involved in controlling the equilibrium between tubular and stacked structures in the Golgi complex. Corepressor targeting diverse transcription regulators such as GLIS2. Has dehydrogenase activity. Functions in brown adipose tissue (BAT) differentiation.::Rattus norvegicus (taxid: 10116) very confident COG0111::SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] 100.00::60-353 PF02826::2-Hacid_dh_C 100.00::134-318 GO:0042803::protein homodimerization activity very confident no hit no match psy3240 274 B1L765::Glyoxylate reductase ::::Korarchaeum cryptofilum (strain OPF8) (taxid: 374847) portable COG0111::SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] 100.00::9-273 PF02826::2-Hacid_dh_C 100.00::9-241 GO:0055114::oxidation-reduction process confident hh_2gcg_A_1::9-144,203-274 very confident psy5266 180 Q9UBQ7::Glyoxylate reductase/hydroxypyruvate reductase ::Enzyme with hydroxy-pyruvate reductase, glyoxylate reductase and D-glycerate dehydrogenase enzymatic activities. Reduces hydroxypyruvate to D-glycerate, glyoxylate to glycolate oxidizes D-glycerate to hydroxypyruvate.::Homo sapiens (taxid: 9606) confident COG0111::SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] 99.98::11-133 PF02826::2-Hacid_dh_C 99.97::11-135 GO:0055114::oxidation-reduction process confident hh_4g2n_A_1::11-117,119-133 very confident psy5259 294 Q9UBQ7::Glyoxylate reductase/hydroxypyruvate reductase ::Enzyme with hydroxy-pyruvate reductase, glyoxylate reductase and D-glycerate dehydrogenase enzymatic activities. Reduces hydroxypyruvate to D-glycerate, glyoxylate to glycolate oxidizes D-glycerate to hydroxypyruvate.::Homo sapiens (taxid: 9606) confident COG0111::SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] 100.00::1-294 PF02826::2-Hacid_dh_C 99.97::165-294 GO:0055114::oxidation-reduction process confident hh_2gcg_A_1::1-10,12-14,17-36,38-102,153-197,200-294 very confident psy10669 337 A4XL61::Serine hydroxymethyltransferase ::Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.::Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) (taxid: 351627) confident COG0112::GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism] 100.00::9-333 PF00464::SHMT 100.00::11-304 GO:0015630::microtubule cytoskeleton confident hh_3ecd_A_1::4-93,98-332 very confident psy15126 300 Q9ZMR8::Delta-aminolevulinic acid dehydratase ::Catalyzes an early step in the biosynthesis of tetrapyrroles. Binds two molecules of 5-aminolevulinate per subunit, each at a distinct site, and catalyzes their condensation to form porphobilinogen.::Helicobacter pylori (strain J99) (taxid: 85963) confident COG0113::HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism] 100.00::2-299 PF00490::ALAD 100.00::2-296 GO:0005829::cytosol confident hh_1w1z_A_1::2-53,55-104,106-155,208-237,239-297 very confident psy7883 607 O17214::Probable fumarate hydratase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) very confident COG0114::FumC Fumarase [Energy production and conversion] 100.00::5-466 PF00206::Lyase_1 100.00::14-346 GO:0006108::malate metabolic process very confident hh_3gtd_A_1::3-41,44-88,90-465 very confident psy13008 638 O17214::Probable fumarate hydratase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) very confident COG0114::FumC Fumarase [Energy production and conversion] 100.00::5-466 PF00206::Lyase_1 100.00::14-346 GO:0006108::malate metabolic process very confident hh_3gtd_A_1::2-41,44-88,90-465 very confident psy16748 291 P14408::Fumarate hydratase, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident COG0114::FumC Fumarase [Energy production and conversion] 100.00::69-246 PF00206::Lyase_1 99.46::78-245 GO:0006108::malate metabolic process confident rp_1vdk_A_1::70-153,155-188 very confident psy10160 558 O17214::Probable fumarate hydratase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG0114::FumC Fumarase [Energy production and conversion] 100.00::261-558 PF00206::Lyase_1 100.00::240-437 GO:0045335::phagocytic vesicle confident bp_1yfm_A_1::337-558 very confident psy16306 302 P54687::Branched-chain-amino-acid aminotransferase, cytosolic ::Catalyzes the first reaction in the catabolism of the essential branched chain amino acids leucine, isoleucine, and valine.::Homo sapiens (taxid: 9606) confident COG0115::IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] 99.77::44-155 PF01063::Aminotran_4 97.86::89-154 GO:0005829::cytosol confident hh_3dth_A_1::19-42,44-156 very confident psy10038 51 P54687::Branched-chain-amino-acid aminotransferase, cytosolic ::Catalyzes the first reaction in the catabolism of the essential branched chain amino acids leucine, isoleucine, and valine.::Homo sapiens (taxid: 9606) confident COG0115::IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] 99.46::2-48 PF01063::Aminotran_4 99.50::2-49 GO:0005829::cytosol confident hh_2a1h_A_1::2-28,30-51 very confident psy19 494 Q2T9W2::THUMP domain-containing protein 3 ::::Bos taurus (taxid: 9913) confident COG0116::Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair] 100.00::16-469 PF01170::UPF0020 100.00::285-464 GO:0003723::RNA binding confident hh_3tma_A_1::17-42,44-59,61-83,85-87,106-109,113-125,127-129,218-360,365-365,367-422,424-441,443-444,447-470 very confident psy8195 192 Q8K9A4::Diaminohydroxyphosphoribosylamino-pyrimidine deaminase ::::Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804) confident COG0117::RibD Pyrimidine deaminase [Coenzyme metabolism] 100.00::1-138 PF00383::dCMP_cyt_deam_1 99.92::1-96 GO:0008251::tRNA-specific adenosine deaminase activity confident hh_2g6v_A_1::1-52,56-191 very confident psy14502 352 O84735::Riboflavin biosynthesis protein RibD ::Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.::Chlamydia trachomatis (strain D/UW-3/Cx) (taxid: 272561) confident COG0117::RibD Pyrimidine deaminase [Coenzyme metabolism] 100.00::1-138 PF01872::RibD_C 100.00::143-348 GO:0005829::cytosol confident hh_2g6v_A_1::1-52,56-244,248-249,251-352 very confident psy14501 352 O84735::Riboflavin biosynthesis protein RibD ::Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'-phosphate.::Chlamydia trachomatis (strain D/UW-3/Cx) (taxid: 272561) confident COG0117::RibD Pyrimidine deaminase [Coenzyme metabolism] 100.00::1-138 PF01872::RibD_C 100.00::143-348 GO:0005829::cytosol confident hh_2g6v_A_1::1-52,56-244,248-249,251-352 very confident psy12516 327 Q5R9E1::Hydroxymethylglutaryl-CoA lyase, mitochondrial ::Key enzyme in ketogenesis (ketone body formation). Terminal step in leucine catabolism.::Pongo abelii (taxid: 9601) confident COG0119::LeuA Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism] 100.00::103-326 PF00682::HMGL-like 100.00::103-277 GO:0005743::mitochondrial inner membrane confident hh_1ydo_A_1::103-309 very confident psy10180 2211 Q5RFJ3::UDP-glucuronosyltransferase 2A3 ::UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Pongo abelii (taxid: 9601) portable COG0120::RpiA Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism] 99.97::17-160 PF00201::UDPGT 100.00::808-1274 GO:0052696::flavonoid glucuronidation confident hh_1xtz_A_1::17-152 very confident psy481 166 Q551C2::Ribose-5-phosphate isomerase ::::Dictyostelium discoideum (taxid: 44689) confident COG0120::RpiA Ribose 5-phosphate isomerase [Carbohydrate transport and metabolism] 100.00::4-166 PF00455::DeoRC 99.96::5-132 GO:0005829::cytosol confident hh_1xtz_A_1::5-135,138-156 very confident psy4725 457 O70249::N-glycosylase/DNA lyase ::DNA repair enzyme that incises DNA at 8-oxoG residues. Excises 7,8-dihydro-8-oxoguanine and 2,6-diamino-4-hydroxy-5-N-methylformamidopyrimidine (FAPY) from damaged DNA. Has a beta-lyase activity that nicks DNA 3' to the lesion.::Rattus norvegicus (taxid: 10116) confident COG0122::AlkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair] 100.00::78-404 PF07934::OGG_N 99.96::13-131 GO:0050896::response to stimulus confident hh_2xhi_A_1::4-39,46-165,187-259,330-408,410-419 very confident psy8529 436 Q91WA3::Histone deacetylase 11 ::Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.::Mus musculus (taxid: 10090) confident COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::110-421 PF00850::Hist_deacetyl 100.00::116-415 GO:0000118::histone deacetylase complex confident hh_1c3p_A_1::109-125,128-141,150-271,273-385,390-425 very confident psy8530 68 Q96DB2::Histone deacetylase 11 ::Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.::Homo sapiens (taxid: 9606) confident COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 98.89::2-48 PF00850::Hist_deacetyl 99.00::2-50 GO:0000118::histone deacetylase complex confident hh_1zz1_A_1::2-61 confident psy15137 774 Q9JI44::DNA methyltransferase 1-associated protein 1 ::Involved in transcription repression and activation. Its interaction with HDAC2 may provide a mechanism for histone deacetylation in heterochromatin following replication of DNA at late firing origins. Can also repress transcription independently of histone deacetylase activity. May specifically potentiate DAXX-mediated repression of glucocorticoid receptor-dependent transcription. Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage. Participates in the nuclear localization of URI1 and increases its transcriptional corepressor activity.::Mus musculus (taxid: 10090) confident COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::460-691 PF00850::Hist_deacetyl 100.00::482-687 GO:0003714::transcription corepressor activity confident rp_2pqp_A_1::533-729 very confident psy1924 265 Q94517::Histone deacetylase Rpd3 ::Catalyzes the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation may constitute a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. For instance, deacetylation of histone H3 may be a prerequisite for the subsequent recruitment of the histone methyltransferase Su(var)3-9 to histones. Involved in position-effect variegation (PEV).::Drosophila melanogaster (taxid: 7227) very confident COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::3-229 PF00850::Hist_deacetyl 100.00::3-230 GO:0005705::polytene chromosome interband very confident rp_3max_A_1::25-143 very confident psy10341 213 Q6P6W3::Histone deacetylase 3 ::Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Required to repress transcription of the POU1F1 transcription factor. Acts as a molecular chaperone for shuttling phosphorylated NR2C1 to PML bodies for sumoylation.::Rattus norvegicus (taxid: 10116) confident COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 99.27::11-111 PF00850::Hist_deacetyl 99.12::11-89 GO:0017053::transcriptional repressor complex confident hh_4a69_A_1::11-151 very confident psy8693 282 Q94517::Histone deacetylase Rpd3 ::Catalyzes the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation may constitute a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. For instance, deacetylation of histone H3 may be a prerequisite for the subsequent recruitment of the histone methyltransferase Su(var)3-9 to histones. Involved in position-effect variegation (PEV).::Drosophila melanogaster (taxid: 7227) very confident COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-137 PF00850::Hist_deacetyl 100.00::1-133 GO:0031523::Myb complex very confident rp_3max_A_1::24-187 very confident psy10342 285 Q6P6W3::Histone deacetylase 3 ::Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4), and some other non-histone substrates. Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. Required to repress transcription of the POU1F1 transcription factor. Acts as a molecular chaperone for shuttling phosphorylated NR2C1 to PML bodies for sumoylation.::Rattus norvegicus (taxid: 10116) confident COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::4-281 PF00850::Hist_deacetyl 100.00::11-280 GO:0042826::histone deacetylase binding confident hh_4a69_A_1::3-258,260-283 very confident psy8282 632 Q20296::Histone deacetylase 6 ::Probable histone deacetylase. Histone deacetylases are responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.::Caenorhabditis elegans (taxid: 6239) portable COG0123::AcuC Deacetylases, including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::334-582 PF00850::Hist_deacetyl 100.00::355-577 GO:0070210::Rpd3L-Expanded complex confident hh_3men_A_1::356-376,378-415,418-453,455-461,464-484,486-500,502-548,550-578 very confident psy14271 65 P34183::Histidine--tRNA ligase ::::Caenorhabditis elegans (taxid: 6239) confident COG0124::HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.51::6-63 PF03129::HGTP_anticodon 99.66::5-61 GO:0005737::cytoplasm confident hh_4g84_A_1::2-65 very confident psy1221 690 A8MPP1::Putative ATP-dependent RNA helicase DDX11-like protein 8 ::Putative DNA helicase.::Homo sapiens (taxid: 9606) portable COG0124::HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.94::8-218 PF13307::Helicase_C_2 99.84::581-689 GO:0005737::cytoplasm confident hh_3net_A_1::4-34,36-54,57-60,62-111,114-114,116-118,138-158,161-218 very confident psy17090 373 B2JIV0::Histidine--tRNA ligase ::::Burkholderia phymatum (strain DSM 17167 / STM815) (taxid: 391038) very confident COG0124::HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-366 PF13393::tRNA-synt_His 100.00::1-248 GO:0005618::cell wall confident hh_4e51_A_1::1-7,9-125,128-260,262-300,305-367 very confident psy1231 151 Q2KI84::Histidine--tRNA ligase, cytoplasmic ::::Bos taurus (taxid: 9913) confident COG0124::HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.72::63-149 PF13393::tRNA-synt_His 99.31::70-146 GO:0005829::cytosol confident hh_4g84_A_1::60-145 very confident psy16874 227 P23919::Thymidylate kinase ::Catalyzes the conversion of dTMP to dTDP.::Homo sapiens (taxid: 9606) confident COG0125::Tmk Thymidylate kinase [Nucleotide transport and metabolism] 100.00::7-216 PF02223::Thymidylate_kin 99.97::13-207 GO:0009165::nucleotide biosynthetic process confident hh_3tmk_A_1::6-34,38-97,115-224 very confident psy8371 528 P50310::Phosphoglycerate kinase 1 ::::Cricetulus griseus (taxid: 10029) very confident COG0126::Pgk 3-phosphoglycerate kinase [Carbohydrate transport and metabolism] 100.00::4-401 PF00162::PGK 100.00::7-394 GO:0007268::synaptic transmission very confident hh_2wzb_A_1::4-171,173-235,237-291,293-401 very confident psy14448 280 A5WVX0::Inosine triphosphate pyrophosphatase ::Pyrophosphatase that hydrolyzes the non-canonical purine nucleotides inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) as well as 2'-deoxy-N-6-hydroxylaminopurine triposphate (dHAPTP) and xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions.::Danio rerio (taxid: 7955) confident COG0127::Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism] 100.00::86-268 PF01725::Ham1p_like 100.00::88-265 GO:0005829::cytosol confident hh_2car_A_1::86-268 very confident psy14444 441 Q4WTN9::Inosine triphosphate pyrophosphatase ::Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) confident COG0127::Xanthosine triphosphate pyrophosphatase [Nucleotide transport and metabolism] 100.00::123-317 PF01725::Ham1p_like 100.00::124-314 GO:0047840::dCTP diphosphatase activity confident rp_2car_A_1::182-319 very confident psy1178 144 O44081::H/ACA ribonucleoprotein complex subunit 4 ::Plays a central role in ribosomal RNA processing. Probable catalytic subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs. Required for maintenance of the germline stem cell lineage during spermatogenesis.::Drosophila melanogaster (taxid: 7227) confident COG0130::TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] 99.65::1-129 PF01472::PUA 99.56::55-128 GO:0015030::Cajal body confident hh_3u28_A_1::1-144 very confident psy1176 232 O44081::H/ACA ribonucleoprotein complex subunit 4 ::Plays a central role in ribosomal RNA processing. Probable catalytic subunit of H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ('psi') residues may serve to stabilize the conformation of rRNAs. Required for maintenance of the germline stem cell lineage during spermatogenesis.::Drosophila melanogaster (taxid: 7227) confident COG0130::TruB Pseudouridine synthase [Translation, ribosomal structure and biogenesis] 100.00::19-223 PF01509::TruB_N 100.00::53-179 GO:0005730::nucleolus confident hh_3u28_A_1::1-107,115-136,139-145,147-222 very confident psy11239 410 Q72U05::Tryptophan synthase beta chain ::The beta subunit is responsible for the synthesis of L-tryptophan from indole and L-serine.::Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) (taxid: 267671) confident COG0133::TrpB Tryptophan synthase beta chain [Amino acid transport and metabolism] 100.00::195-407 PF00291::PALP 99.97::197-402 GO:0004834::tryptophan synthase activity confident hh_1v8z_A_1::196-401 very confident psy2261 857 P31335::Bifunctional purine biosynthesis protein PURH ::Bifunctional enzyme that catalyzes 2 steps in purine biosynthesis.::Gallus gallus (taxid: 9031) confident COG0138::PurH AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) [Nucleotide transport and metabolism] 100.00::6-857 PF01808::AICARFT_IMPCHas 100.00::137-726 GO:0005829::cytosol confident hh_1g8m_A_2::325-473,475-491 very confident psy11203 438 Q5U2R1::Decaprenyl-diphosphate synthase subunit 2 ::Supplies decaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinones ubiquinone-10.::Rattus norvegicus (taxid: 10116) confident COG0142::IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] 100.00::86-437 PF00348::polyprenyl_synt 100.00::111-405 GO:0000010::trans-hexaprenyltranstransferase activity confident hh_3apz_A_1::89-125,127-185,187-191,193-252,281-365,368-378,381-437 very confident psy3877 145 Q9WTN0::Geranylgeranyl pyrophosphate synthase ::Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate, an important precursor of carotenoids and geranylated proteins.::Mus musculus (taxid: 10090) confident COG0142::IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] 99.95::3-142 PF00348::polyprenyl_synt 99.83::2-108 GO:0004311::farnesyltranstransferase activity confident hh_2q80_A_1::2-143 very confident psy3879 247 Q9WTN0::Geranylgeranyl pyrophosphate synthase ::Catalyzes the trans-addition of the three molecules of IPP onto DMAPP to form geranylgeranyl pyrophosphate, an important precursor of carotenoids and geranylated proteins.::Mus musculus (taxid: 10090) confident COG0142::IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] 100.00::9-185 PF00348::polyprenyl_synt 100.00::15-201 GO:0004311::farnesyltranstransferase activity confident hh_2q80_A_1::8-173,183-201 very confident psy5532 168 Q53479::Short chain isoprenyl diphosphate synthase ::::Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) (taxid: 79929) portable COG0142::IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] 99.97::2-123 PF00348::polyprenyl_synt 99.95::2-167 GO:0004659::prenyltransferase activity confident hh_3pko_A_1::2-122 very confident psy9101 255 P08524::Farnesyl pyrophosphate synthase ::Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0142::IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] 100.00::68-249 PF00348::polyprenyl_synt 100.00::88-254 GO:0005829::cytosol confident hh_2qis_A_1::30-66,88-185,187-254 very confident psy17022 287 P18900::Hexaprenyl pyrophosphate synthase, mitochondrial ::Assembly of polyisoprenoid side chains. The polyprenyl synthase of coenzyme Q biosynthesis catalyzes the formation from isopentenyl diphosphate of all trans-polyprenyl pyrophosphates generally ranging in length of between 6 and 10 isoprene units depending on the species.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0142::IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] 100.00::1-287 PF00348::polyprenyl_synt 99.96::1-285 GO:0046982::protein heterodimerization activity confident hh_3apz_A_1::1-46,91-154,220-287 very confident psy5533 136 Q5T2R2::Decaprenyl-diphosphate synthase subunit 1 ::Supplies decaprenyl diphosphate, the precursor for the side chain of the isoprenoid quinones ubiquinone-10.::Homo sapiens (taxid: 9606) confident COG0142::IspA Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism] 99.97::1-136 PF00348::polyprenyl_synt 99.86::1-101 GO:0046982::protein heterodimerization activity confident hh_3pko_A_1::1-136 very confident psy4049 528 Q9ZCP0::Methionine--tRNA ligase ::Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.::Rickettsia prowazekii (strain Madrid E) (taxid: 272947) confident COG0143::MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::3-506 PF09334::tRNA-synt_1g 100.00::6-383 GO:0004825::methionine-tRNA ligase activity confident hh_2csx_A_1::3-40,43-145,169-234,237-268,270-394,408-506,509-513 very confident psy14678 129 A1K4R7::Isoleucine--tRNA ligase ::Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).::Azoarcus sp. (strain BH72) (taxid: 62928) confident COG0143::MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.93::37-127 PF09334::tRNA-synt_1g 99.92::41-127 GO:0005739::mitochondrion confident hh_1rqg_A_1::39-99,103-127 very confident psy2393 576 B1XWM2::Methionine--tRNA ligase ::Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.::Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (taxid: 395495) very confident COG0143::MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::10-575 PF09334::tRNA-synt_1g 100.00::14-421 GO:0005829::cytosol confident hh_3h99_A_1::8-49,55-126,128-207,210-219,221-239,242-292,299-372,374-435,437-439,441-535,537-546,548-575 very confident psy7269 235 no hit no match COG0143::MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-213 PF09334::tRNA-synt_1g 100.00::1-197 GO:0005829::cytosol confident hh_3h99_A_1::1-12,15-50,53-84,87-117,120-154,163-209 very confident psy7266 1175 no hit no match COG0143::MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::280-823 PF09334::tRNA-synt_1g 100.00::283-662 GO:0005875::microtubule associated complex confident hh_3h99_A_1::276-306,308-485,488-523,526-544,548-576,579-614,616-675,679-735,737-778,780-782,788-794,796-821 very confident psy7914 365 B7KCI7::Leucine--tRNA ligase ::::Cyanothece sp. (strain PCC 7424) (taxid: 65393) confident COG0143::MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::185-363 PF09334::tRNA-synt_1g 100.00::188-362 GO:0016070::RNA metabolic process confident hh_2v0c_A_1::184-325,327-360 very confident psy17365 646 O13935::Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b ::Methylates cytosine to m5C at several positions in different tRNAs and pre-tRNAs containing intron.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0144::Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] 100.00::48-427 PF01189::Nol1_Nop2_Fmu 100.00::65-427 GO:0000003::reproduction confident hh_1ixk_A_1::60-83,85-99,115-127,130-143,155-200,208-250,261-342,345-351,358-369,395-398,404-409,412-427 very confident psy11559 189 P40991::Putative ribosomal RNA methyltransferase Nop2 ::Required for 60S ribosomal subunit synthesis. May act as ribosomal RNA methyltransferase.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0144::Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] 100.00::2-182 PF01189::Nol1_Nop2_Fmu 100.00::3-184 GO:0005829::cytosol confident hh_1ixk_A_1::2-41,43-159,162-183 very confident psy7376 180 P40991::Putative ribosomal RNA methyltransferase Nop2 ::Required for 60S ribosomal subunit synthesis. May act as ribosomal RNA methyltransferase.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0144::Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] 99.89::13-180 PF01189::Nol1_Nop2_Fmu 99.56::87-180 GO:0005829::cytosol confident hh_1ixk_A_1::56-80,82-125,127-179 very confident psy7378 90 P40991::Putative ribosomal RNA methyltransferase Nop2 ::Required for 60S ribosomal subunit synthesis. May act as ribosomal RNA methyltransferase.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0144::Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] 99.77::12-74 PF01189::Nol1_Nop2_Fmu 99.70::13-75 GO:0005829::cytosol confident hh_3m6w_A_1::13-30,35-75 very confident psy17793 397 B7USL2::Ribosomal RNA small subunit methyltransferase F ::Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.::Escherichia coli O127:H6 (strain E2348/69 / EPEC) (taxid: 574521) portable COG0144::Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] 100.00::44-312 PF01189::Nol1_Nop2_Fmu 100.00::62-310 GO:0030488::tRNA methylation confident hh_3m6w_A_1::62-136,138-149,160-189,194-210,222-291,298-314 very confident psy2548 207 Q54NW6::5-oxoprolinase ::Catalyzes the cleavage of 5-oxo-L-proline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.::Dictyostelium discoideum (taxid: 44689) confident COG0146::HyuB N-methylhydantoinase B/acetone carboxylase, alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-203 PF02538::Hydantoinase_B 100.00::2-204 GO:0005829::cytosol confident rp_1vt4_I_1::1-20,25-64,70-76,82-92,95-141,143-183,190-192 portable psy2555 90 Q8K010::5-oxoprolinase ::Catalyzes the cleavage of 5-oxo-L-proline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.::Mus musculus (taxid: 10090) confident COG0146::HyuB N-methylhydantoinase B/acetone carboxylase, alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.97::3-90 PF02538::Hydantoinase_B 99.97::2-90 GO:0005829::cytosol confident no hit no match psy12655 299 P06733::Alpha-enolase ::MBP1 binds to the myc promoter and acts as a transcriptional repressor. May be a tumor suppressor.::Homo sapiens (taxid: 9606) very confident COG0148::Eno Enolase [Carbohydrate transport and metabolism] 100.00::2-299 PF00113::Enolase_C 100.00::143-299 GO:0046982::protein heterodimerization activity very confident hh_3qtp_A_1::1-78,81-299 very confident psy12654 133 P17183::Gamma-enolase ::Has neurotrophic and neuroprotective properties on a broad spectrum of central nervous system (CNS) neurons. Binds, in a calcium-dependent manner, to cultured neocortical neurons and promotes cell survival.::Mus musculus (taxid: 10090) confident COG0148::Eno Enolase [Carbohydrate transport and metabolism] 100.00::4-128 PF00113::Enolase_C 100.00::3-132 GO:0046982::protein heterodimerization activity very confident hh_3otr_A_1::3-133 very confident psy5700 315 P06733::Alpha-enolase ::MBP1 binds to the myc promoter and acts as a transcriptional repressor. May be a tumor suppressor.::Homo sapiens (taxid: 9606) confident COG0148::Eno Enolase [Carbohydrate transport and metabolism] 100.00::2-222 PF03952::Enolase_N 100.00::2-134 GO:0046982::protein heterodimerization activity confident hh_2al1_A_1::2-174,180-183,186-210 very confident psy15211 68 Q39EV9::Enolase ::Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.::Burkholderia sp. (strain 383) (taxid: 269483) confident COG0148::Eno Enolase [Carbohydrate transport and metabolism] 99.93::2-68 PF03952::Enolase_N 99.96::2-68 GO:0046982::protein heterodimerization activity confident hh_3otr_A_1::2-68 very confident psy9117 61 no hit no match COG0148::Eno Enolase [Carbohydrate transport and metabolism] 99.91::2-61 PF03952::Enolase_N 99.94::2-61 GO:0046982::protein heterodimerization activity confident no hit no match psy7461 149 Q6FRI3::Triosephosphate isomerase ::::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident COG0149::TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism] 100.00::2-148 PF00121::TIM 100.00::5-148 GO:0005739::mitochondrion confident hh_1mo0_A_1::2-148 very confident psy9976 349 P51570::Galactokinase ::Major enzyme for galactose metabolism.::Homo sapiens (taxid: 9606) confident COG0153::GalK Galactokinase [Carbohydrate transport and metabolism] 100.00::10-346 PF00288::GHMP_kinases_N 99.66::99-168 GO:0004335::galactokinase activity confident hh_1wuu_A_1::8-16,18-26,28-88,91-134,136-189,191-241,244-345 very confident psy7887 315 Q5R6J8::N-acetylgalactosamine kinase ::Acts on GalNAc. Also acts as a galactokinase when galactose is present at high concentrations.::Pongo abelii (taxid: 9601) portable COG0153::GalK Galactokinase [Carbohydrate transport and metabolism] 100.00::138-301 PF08544::GHMP_kinases_C 99.50::201-277 GO:0044424::intracellular part confident hh_2a2c_A_1::21-43,45-100,163-195,201-302 very confident psy7885 79 Q5R6J8::N-acetylgalactosamine kinase ::Acts on GalNAc. Also acts as a galactokinase when galactose is present at high concentrations.::Pongo abelii (taxid: 9601) confident COG0153::GalK Galactokinase [Carbohydrate transport and metabolism] 99.86::15-69 PF10509::GalKase_gal_bdg 99.90::15-53 GO:0005634::nucleus confident hh_2a2c_A_1::3-65,67-76 very confident psy7886 115 Q5R6J8::N-acetylgalactosamine kinase ::Acts on GalNAc. Also acts as a galactokinase when galactose is present at high concentrations.::Pongo abelii (taxid: 9601) confident COG0153::GalK Galactokinase [Carbohydrate transport and metabolism] 99.93::1-76 no hit no match GO:0005829::cytosol confident rp_2a2c_A_1::3-74 very confident psy15609 567 Q6DH69::Fatty-acid amide hydrolase 2-A ::::Danio rerio (taxid: 7955) confident COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::68-563 PF01425::Amidase 100.00::90-544 GO:0005811::lipid particle confident hh_3kfu_E_1::72-99,122-135,137-149,160-298,303-353,357-357,359-379,381-387,389-435,439-522,524-553,555-564 very confident psy7558 508 Q6DH69::Fatty-acid amide hydrolase 2-A ::::Danio rerio (taxid: 7955) confident COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::64-508 PF01425::Amidase 100.00::86-508 GO:0005811::lipid particle confident hh_3kfu_E_1::68-109,111-123,133-271,276-325,329-329,331-351,353-358,360-407,410-410,412-494,496-508 very confident psy178 84 P97612::Fatty-acid amide hydrolase 1 ::Degrades bioactive fatty acid amides like oleamide, the endogenous cannabinoid, anandamide and myristic amide to their corresponding acids, thereby serving to terminate the signaling functions of these molecules. Hydrolyzes polyunsaturated substrate anandamide preferentially as compared to monounsaturated substrates.::Rattus norvegicus (taxid: 10116) portable COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::1-84 PF01425::Amidase 100.00::1-84 GO:0005829::cytosol confident hh_2dc0_A_1::1-19,22-84 very confident psy5206 407 Q6DH69::Fatty-acid amide hydrolase 2-A ::::Danio rerio (taxid: 7955) confident COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::64-390 PF01425::Amidase 100.00::86-395 GO:0005829::cytosol confident hh_3kfu_E_1::68-109,111-123,133-265,270-307,322-322,324-343,347-347,349-369,371-377,379-395 very confident psy15831 304 O28325::Putative amidase AF_1954 ::::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) portable COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::2-295 PF01425::Amidase 100.00::2-279 GO:0044444::cytoplasmic part confident hh_3kfu_E_1::2-9,11-23,38-177,183-208,210-233,239-259,261-279 very confident psy7560 507 Q6DH69::Fatty-acid amide hydrolase 2-A ::::Danio rerio (taxid: 7955) confident COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::183-486 PF01425::Amidase 100.00::205-502 GO:0044444::cytoplasmic part confident hh_3kfu_E_1::187-228,230-242,252-390,395-444,448-448,450-470,472-477,479-498 very confident psy10133 342 Q29BT3::Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial ::Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::11-338 PF01425::Amidase 100.00::12-322 GO:0050567::glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity confident hh_3kfu_E_1::12-96,98-119,121-185,188-201,203-245,247-269,272-272,274-300,302-339 very confident psy10129 135 B6IZ25::Glutamyl-tRNA(Gln) amidotransferase subunit A ::Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln).::Coxiella burnetii (strain CbuG_Q212) (taxid: 434923) confident COG0154::GatA Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases [Translation, ribosomal structure and biogenesis] 100.00::1-133 PF01425::Amidase 100.00::14-133 GO:1901564::organonitrogen compound metabolic process confident hh_3h0l_A_1::1-50,52-133 very confident psy3753 928 Q9JUD5::Phosphoadenosine phosphosulfate reductase ::Reduction of activated sulfate into sulfite.::Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) (taxid: 122587) confident COG0155::CysI Sulfite reductase, beta subunit (hemoprotein) [Inorganic ion transport and metabolism] 100.00::1-540 PF01507::PAPS_reduct 100.00::712-888 GO:0009570::chloroplast stroma confident hh_1zj8_A_1::7-23,28-177,180-277,295-302,319-330,332-343,349-530,533-544 very confident psy16848 514 Q63147::5-aminolevulinate synthase, erythroid-specific, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident COG0156::BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] 100.00::16-477 PF00155::Aminotran_1_2 99.96::19-474 GO:0005829::cytosol confident hh_2bwn_A_1::16-142,255-481 very confident psy16850 174 P38092::5-aminolevulinate synthase, mitochondrial ::::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) confident COG0156::BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] 100.00::9-164 PF00155::Aminotran_1_2 98.82::53-166 GO:0006783::heme biosynthetic process confident rp_2bwn_A_1::11-137 very confident psy15447 457 O54695::Serine palmitoyltransferase 1 ::Serine palmitoyltransferase (SPT). The heterodimer formed with SPTLC2 or SPTLC3 constitutes the catalytic core. The composition of the serine palmitoyltransferase (SPT) complex determines the substrate preference. The SPTLC1-SPTLC2-SPTSSA complex shows a strong preference for C16-CoA substrate, while the SPTLC1-SPTLC3-SPTSSA isozyme uses both C14-CoA and C16-CoA as substrates. The SPTLC1-SPTLC2-SPTSSB complex displays a strong preference for C18-CoA substrate, while the SPTLC1-SPTLC3-SPTSSB isozyme has the ability to use a broader range of acyl-CoAs.::Cricetulus griseus (taxid: 10029) confident COG0156::BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] 100.00::67-447 PF00202::Aminotran_3 100.00::66-381 GO:0035339::SPOTS complex confident hh_2w8t_A_1::36-53,63-207,215-276,278-358,363-384,392-415,418-454 very confident psy2211 100 Q9XVI6::Serine palmitoyltransferase 3 ::Component of the serine palmitoyltransferase (SPT) that catalyzes the first committed step in sphingolipid biosynthesis, which is the condensation of an acyl-CoA species and L-serine. The catalytic core is composed of a heterodimer of sptl-1 and sptl-2 or sptl-1 and sptl-3 (By similarity). Required for the specification of abicobasal polarity and development of the gut lumen.::Caenorhabditis elegans (taxid: 6239) confident COG0156::BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism] 99.56::8-98 no hit no match GO:0017059::serine C-palmitoyltransferase complex confident hh_2w8t_A_1::23-39,41-41,55-55,58-76,78-98 confident psy7455 400 Q9Z1N1::Fructose-1,6-bisphosphatase isozyme 2 ::::Rattus norvegicus (taxid: 10116) confident COG0158::Fbp Fructose-1,6-bisphosphatase [Carbohydrate transport and metabolism] 100.00::11-356 PF00316::FBPase 100.00::12-355 GO:0015976::carbon utilization confident hh_2gq1_A_1::12-153,156-165,212-356 very confident psy13322 195 Q3UEG6::Alanine--glyoxylate aminotransferase 2, mitochondrial ::::Mus musculus (taxid: 10090) confident COG0160::GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] 100.00::1-195 PF00202::Aminotran_3 100.00::37-195 GO:0005829::cytosol confident hh_3i5t_A_1::34-52,54-106,108-195 very confident psy1628 114 Q7SY54::Ethanolamine-phosphate phospho-lyase ::::Danio rerio (taxid: 7955) confident COG0160::GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] 99.97::17-114 PF00202::Aminotran_3 99.94::40-114 GO:0005829::cytosol confident hh_4ffc_A_1::40-92,94-101,104-114 very confident psy6205 224 Q8TBG4::Ethanolamine-phosphate phospho-lyase ::::Homo sapiens (taxid: 9606) confident COG0160::GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] 100.00::38-223 PF00202::Aminotran_3 100.00::70-223 GO:0005829::cytosol confident hh_3ruy_A_1::90-130,132-139,142-175,178-223 very confident psy237 236 Q21217::Probable 4-aminobutyrate aminotransferase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG0160::GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] 99.89::50-204 PF00202::Aminotran_3 99.62::85-186 GO:0044444::cytoplasmic part confident bp_1ohv_A_1::53-157 very confident psy4805 159 P17649::4-aminobutyrate aminotransferase ::Required for the degradation of gamma-aminobutyric acid (GABA), which is important for utilization of GABA as nitrogen source and for oxidative stress tolerance. Deaminates GABA to succinate semialdehyde, which in turn is converted to succinate by the succinate-semialdehyde dehydrogenase UGA2. Cannot transaminate beta-alanine (BAL).::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0160::GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] 100.00::1-159 PF00202::Aminotran_3 99.95::1-159 GO:0045471::response to ethanol confident bp_1ohv_A_1::1-25,27-159 very confident psy11784 284 B7NJT8::Putrescine aminotransferase ::Catalyzes the aminotransferase reaction from putrescine to 2-oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. Is also able to transaminate cadaverine and, in lower extent, spermidine, but not ornithine.::Escherichia coli O7:K1 (strain IAI39 / ExPEC) (taxid: 585057) portable COG0160::GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism] 100.00::1-268 PF00202::Aminotran_3 100.00::1-211 GO:1901606::alpha-amino acid catabolic process confident hh_3ruy_A_1::1-55,64-67,77-85,89-141,143-211,213-213,216-235,238-265 very confident psy8199 965 A1VUJ4::Biotin synthase ::Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.::Polaromonas naphthalenivorans (strain CJ2) (taxid: 365044) confident COG0161::BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism] 100.00::221-647 PF00202::Aminotran_3 100.00::246-589 GO:0044464::cell part confident hh_1v9f_A_1::2-17,20-148,151-165,170-237 very confident psy938 241 Q9W107::Probable tyrosine--tRNA ligase, mitochondrial ::Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).::Drosophila melanogaster (taxid: 7227) confident COG0162::TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-215 PF00579::tRNA-synt_1b 99.52::4-115 GO:0044444::cytoplasmic part confident hh_2jan_A_1::3-117,120-142,145-191,193-216 very confident psy12553 401 Q9VPP5::Ribonuclease H2 subunit A ::Catalytic subunit of RNase HII, an endonuclease that specifically degrades the RNA of RNA:DNA hybrids. Participates in DNA replication, possibly by mediating the removal of lagging-strand Okazaki fragment RNA primers during DNA replication. Mediates the excision of single ribonucleotides from DNA:RNA duplexes.::Drosophila melanogaster (taxid: 7227) confident COG0164::RnhB Ribonuclease HII [DNA replication, recombination, and repair] 100.00::41-276 PF01351::RNase_HII 100.00::43-270 GO:0006401::RNA catabolic process confident hh_3kio_A_1::11-16,19-69,71-185,201-291,295-309,311-312,316-335 very confident psy16111 137 A6TL09::Argininosuccinate lyase ::::Alkaliphilus metalliredigens (strain QYMF) (taxid: 293826) confident COG0165::ArgH Argininosuccinate lyase [Amino acid transport and metabolism] 100.00::24-137 PF00206::Lyase_1 99.69::29-137 GO:0004056::argininosuccinate lyase activity confident hh_1tj7_A_1::25-137 very confident psy17729 127 A6TL09::Argininosuccinate lyase ::::Alkaliphilus metalliredigens (strain QYMF) (taxid: 293826) confident COG0165::ArgH Argininosuccinate lyase [Amino acid transport and metabolism] 99.98::24-127 PF00206::Lyase_1 99.33::29-127 GO:0004056::argininosuccinate lyase activity confident hh_1tj7_A_1::25-127 very confident psy15027 314 B1J1V0::Argininosuccinate lyase ::::Pseudomonas putida (strain W619) (taxid: 390235) confident COG0165::ArgH Argininosuccinate lyase [Amino acid transport and metabolism] 100.00::45-305 PF00206::Lyase_1 99.92::50-149 GO:0004056::argininosuccinate lyase activity confident no hit no match psy17727 261 B1J1V0::Argininosuccinate lyase ::::Pseudomonas putida (strain W619) (taxid: 390235) portable COG0165::ArgH Argininosuccinate lyase [Amino acid transport and metabolism] 100.00::24-260 PF00206::Lyase_1 100.00::29-260 GO:0004056::argininosuccinate lyase activity confident hh_2e9f_A_1::25-260 very confident psy17728 231 Q2LT96::Argininosuccinate lyase ::::Syntrophus aciditrophicus (strain SB) (taxid: 56780) confident COG0165::ArgH Argininosuccinate lyase [Amino acid transport and metabolism] 100.00::25-229 PF00206::Lyase_1 100.00::29-229 GO:0004056::argininosuccinate lyase activity confident hh_2e9f_A_1::25-229 very confident psy3416 455 B1J1V0::Argininosuccinate lyase ::::Pseudomonas putida (strain W619) (taxid: 390235) confident COG0165::ArgH Argininosuccinate lyase [Amino acid transport and metabolism] 100.00::1-443 PF00206::Lyase_1 100.00::1-185 GO:0044237::cellular metabolic process confident hh_2e9f_A_1::1-151,249-443 very confident psy4522 560 Q3ZBD7::Glucose-6-phosphate isomerase ::Besides it's role as a glycolytic enzyme, mammalian GPI can function as a tumor-secreted cytokine and an angiogenic factor (AMF) that stimulates endothelial cell motility. GPI is also a neurotrophic factor (Neuroleukin) for spinal and sensory neurons.::Bos taurus (taxid: 9913) very confident COG0166::Pgi Glucose-6-phosphate isomerase [Carbohydrate transport and metabolism] 100.00::58-550 PF00342::PGI 100.00::62-553 GO:0005811::lipid particle very confident hh_3hjb_A_1::8-26,28-50,57-423,426-559 very confident psy5880 328 O35435::Dihydroorotate dehydrogenase (quinone), mitochondrial ::Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor.::Mus musculus (taxid: 10090) confident COG0167::PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] 100.00::57-328 PF01180::DHO_dh 100.00::119-310 GO:0005758::mitochondrial intermembrane space confident hh_1tv5_A_1::108-202,205-224,227-327 very confident psy16199 842 Q6NYG8::Dihydropyrimidine dehydrogenase [NADP(+)] ::Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine.::Danio rerio (taxid: 7955) confident COG0167::PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] 100.00::463-780 PF01180::DHO_dh 100.00::348-767 GO:0050661::NADP binding confident hh_1gte_A_1::25-135,137-140,142-437,441-442,457-461,479-479,520-520,544-546,564-823 very confident psy13136 695 G5EFC3::Potassium voltage-gated channel protein egl-36 ::Voltage-dependent potassium channel involved in the excitation of muscles operating egg-laying and defecation.::Caenorhabditis elegans (taxid: 6239) confident COG0168::TrkG Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] 90.84::542-590 PF00520::Ion_trans 99.81::412-591 GO:0030673::axolemma confident no hit no match psy8844 353 O17185::Two pore potassium channel protein sup-9 ::Potassium channel involved in coordination of muscle contraction.::Caenorhabditis elegans (taxid: 6239) very confident COG0168::TrkG Trk-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] 91.07::85-238 PF07885::Ion_trans_2 99.51::169-247 GO:0036195::muscle cell projection membrane very confident hh_3ukm_A_1::3-213,215-251 very confident psy10034 399 Q2FS27::Serine--tRNA ligase ::Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).::Methanospirillum hungatei (strain JF-1 / DSM 864) (taxid: 323259) confident COG0172::SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::2-375 PF00587::tRNA-synt_2b 99.95::148-288 GO:0005524::ATP binding confident hh_3vbb_A_1::1-203,208-368,372-399 very confident psy11602 1083 Q39230::Serine--tRNA ligase ::Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).::Arabidopsis thaliana (taxid: 3702) confident COG0172::SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::191-454 PF00587::tRNA-synt_2b 99.89::14-141 GO:0005524::ATP binding confident hh_3vbb_A_2::17-211,215-243 very confident psy10664 75 P26638::Serine--tRNA ligase, cytoplasmic ::Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).::Mus musculus (taxid: 10090) confident COG0172::SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.93::1-75 PF00587::tRNA-synt_2b 99.09::28-75 GO:0005739::mitochondrion confident hh_3vbb_A_1::1-75 very confident psy1870 264 B7J1F4::Serine--tRNA ligase ::Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).::Borrelia burgdorferi (strain ZS7) (taxid: 445985) portable COG0172::SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::10-230 PF00587::tRNA-synt_2b 100.00::7-153 GO:0043167::ion binding confident hh_1wle_A_1::6-31,33-222,224-234 very confident psy10035 102 Q9GMB8::Serine--tRNA ligase, cytoplasmic ::Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).::Bos taurus (taxid: 9913) confident COG0172::SerS Seryl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.44::2-73 PF02403::Seryl_tRNA_N 99.81::2-86 GO:0005524::ATP binding confident hh_3vbb_A_1::1-74 very confident psy3763 595 B1JYI9::Aspartate--tRNA ligase ::::Burkholderia cenocepacia (strain MC0-3) (taxid: 406425) very confident COG0173::AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-592 PF00152::tRNA-synt_2 100.00::118-566 GO:0005829::cytosol confident hh_1c0a_A_1::1-114,116-267,269-417,423-443,445-469,471-590 very confident psy3762 595 B1JYI9::Aspartate--tRNA ligase ::::Burkholderia cenocepacia (strain MC0-3) (taxid: 406425) very confident COG0173::AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-592 PF00152::tRNA-synt_2 100.00::118-566 GO:0005829::cytosol confident hh_1c0a_A_1::1-114,116-267,269-417,423-443,445-469,471-590 very confident psy8372 883 A8LXY1::Aspartate--tRNA ligase ::::Salinispora arenicola (strain CNS-205) (taxid: 391037) portable COG0173::AspS Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::295-883 PF00152::tRNA-synt_2 100.00::327-860 GO:0006480::N-terminal protein amino acid methylation confident hh_3a5y_A_1::340-342,344-362,364-468,471-492,500-500,502-505,639-645,647-647,651-652,662-662,684-688,695-705,718-725,729-741,753-766,776-859 very confident psy10062 405 P20477::Glutamine synthetase 1, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0174::GlnA Glutamine synthetase [Amino acid transport and metabolism] 100.00::3-403 PF00120::Gln-synt_C 99.97::180-401 GO:0043234::protein complex confident hh_2d3a_A_1::58-61,63-109,118-127,129-135,137-139,146-182,188-192,195-304,309-344,371-405 very confident psy6604 85 A5UCY0::Transaldolase ::Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.::Haemophilus influenzae (strain PittEE) (taxid: 374930) confident COG0176::MipB Transaldolase [Carbohydrate transport and metabolism] 98.88::27-67 PF00923::Transaldolase 97.71::36-77 GO:0005634::nucleus confident hh_3hjz_A_1::23-84 very confident psy10958 321 A6WKC4::Transaldolase ::Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.::Shewanella baltica (strain OS185) (taxid: 402882) confident COG0176::MipB Transaldolase [Carbohydrate transport and metabolism] 100.00::3-220 PF00923::Transaldolase 100.00::1-227 GO:0005829::cytosol confident hh_3m16_A_1::1-76,78-181,233-234,237-283 very confident psy10967 199 Q602L8::Transaldolase ::Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.::Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) (taxid: 243233) confident COG0176::MipB Transaldolase [Carbohydrate transport and metabolism] 99.94::68-186 PF00923::Transaldolase 99.95::68-185 GO:0005829::cytosol confident hh_2e1d_A_1::68-195 very confident psy4002 378 O35980::Endonuclease III-like protein 1 ::Has both an apurinic and/or apyrimidinic endonuclease activity and a DNA N-glycosylase activity. Incises damaged DNA at cytosines, thymines and guanines. Acts on a damaged strand, 5' from the damaged site. Required for the repair of both oxidative DNA damage and spontaneous mutagenic lesions.::Mus musculus (taxid: 10090) confident COG0177::Nth Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair] 100.00::108-364 PF00730::HhH-GPD 99.73::152-324 GO:0006285::base-excision repair, AP site formation confident hh_2abk_A_1::144-251,288-306,308-362 very confident psy5683 264 Q3TC72::Fumarylacetoacetate hydrolase domain-containing protein 2A ::May have hydrolase activity.::Mus musculus (taxid: 10090) confident COG0179::MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::70-259 PF01557::FAA_hydrolase 100.00::84-263 GO:0005829::cytosol confident hh_3rr6_A_1::1-10,16-36,47-50,62-80,82-129,131-167,171-194,197-197,199-260 very confident psy538 97 Q6AYQ8::Acylpyruvase FAHD1, mitochondrial ::Probable mitochondrial acylpyruvase which is able to hydrolyze acetylpyruvate and fumarylpyruvate in vitro.::Rattus norvegicus (taxid: 10116) confident COG0179::MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-96 PF01557::FAA_hydrolase 99.92::7-96 GO:0005829::cytosol confident hh_3rr6_A_1::1-28,30-31,33-96 very confident psy9188 104 Q6P587::Acylpyruvase FAHD1, mitochondrial ::Probable mitochondrial acylpyruvase which is able to hydrolyze acetylpyruvate and fumarylpyruvate in vitro.::Homo sapiens (taxid: 9606) confident COG0179::MhpD 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-103 PF01557::FAA_hydrolase 99.93::1-103 GO:0005829::cytosol confident hh_1saw_A_1::1-103 very confident psy3680 422 Q9UGM6::Tryptophan--tRNA ligase, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG0180::TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::32-343 PF00579::tRNA-synt_1b 100.00::32-317 GO:0001570::vasculogenesis confident hh_2g36_A_1::33-211,214-223,225-225,227-235,239-268,270-362 very confident psy5948 549 Q6TGS6::Tyrosine--tRNA ligase, cytoplasmic ::Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr).::Danio rerio (taxid: 7955) very confident COG0180::TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::46-345 PF00579::tRNA-synt_1b 100.00::45-337 GO:0005634::nucleus very confident hh_1ntg_A_1::366-453,455-518 very confident psy13709 405 P23381::Tryptophan--tRNA ligase, cytoplasmic ::Isoform 1, isoform 2 and T1-TrpRS have aminoacylation activity while T2-TrpRS lacks it. Isoform 2, T1-TrpRS and T2-TrpRS possess angiostatic activity whereas isoform 1 lacks it. T2-TrpRS inhibits fluid shear stress-activated responses of endothelial cells. Regulates ERK, Akt, and eNOS activation pathways that are associated with angiogenesis, cytoskeletal reorganization and shear stress-responsive gene expression.::Homo sapiens (taxid: 9606) very confident COG0180::TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::90-391 PF00579::tRNA-synt_1b 100.00::89-378 GO:0005829::cytosol very confident hh_1r6u_A_1::16-405 very confident psy11425 672 B2JEN9::Porphobilinogen deaminase ::Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.::Burkholderia phymatum (strain DSM 17167 / STM815) (taxid: 391038) confident COG0181::HemC Porphobilinogen deaminase [Coenzyme metabolism] 100.00::371-670 PF01379::Porphobil_deam 100.00::369-577 GO:0006461::protein complex assembly confident rp_3tr0_A_1::127-314 very confident psy11426 672 B2JEN9::Porphobilinogen deaminase ::Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.::Burkholderia phymatum (strain DSM 17167 / STM815) (taxid: 391038) confident COG0181::HemC Porphobilinogen deaminase [Coenzyme metabolism] 100.00::371-670 PF01379::Porphobil_deam 100.00::369-577 GO:0006461::protein complex assembly confident hh_1gtk_A_1::371-612,616-670 very confident psy11424 245 B2JEN9::Porphobilinogen deaminase ::Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.::Burkholderia phymatum (strain DSM 17167 / STM815) (taxid: 391038) confident COG0181::HemC Porphobilinogen deaminase [Coenzyme metabolism] 100.00::1-243 PF01379::Porphobil_deam 100.00::1-150 GO:0009570::chloroplast stroma confident hh_1gtk_A_1::1-185,189-243 very confident psy2576 80 Q62818::Translation initiation factor eIF-2B subunit beta ::Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.::Rattus norvegicus (taxid: 10116) confident COG0182::Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] 99.87::4-80 PF01008::IF-2B 99.88::3-80 GO:0009408::response to heat confident hh_1vb5_A_1::3-27,29-30,33-45,56-80 very confident psy6709 288 Q5HZE4::Methylthioribose-1-phosphate isomerase ::Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).::Rattus norvegicus (taxid: 10116) confident COG0182::Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] 100.00::2-288 PF01008::IF-2B 99.73::152-286 GO:0009506::plasmodesma confident hh_1w2w_A_1::2-70,109-116,149-191,195-273 very confident psy1213 472 O46629::Trifunctional enzyme subunit beta, mitochondrial ::::Bos taurus (taxid: 9913) very confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 100.00::46-466 PF00108::Thiolase_N 100.00::46-318 GO:0003857::3-hydroxyacyl-CoA dehydrogenase activity very confident hh_1afw_A_1::39-173,181-181,183-183,186-188,195-202,211-291,293-343,345-388,392-394,409-444,447-465 very confident psy16700 372 Q5RES5::3-ketoacyl-CoA thiolase, mitochondrial ::Abolishes BNIP3-mediated apoptosis and mitochondrial damage.::Pongo abelii (taxid: 9601) very confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 100.00::6-372 PF00108::Thiolase_N 100.00::5-268 GO:0005743::mitochondrial inner membrane very confident hh_1ulq_A_1::6-60,63-142,144-372 very confident psy12877 814 Q8QZT1::Acetyl-CoA acetyltransferase, mitochondrial ::Plays a major role in ketone body metabolism.::Mus musculus (taxid: 10090) confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 100.00::1-353 PF00108::Thiolase_N 100.00::377-638 GO:0005777::peroxisome confident hh_4e1l_A_2::377-585,587-612,614-689 very confident psy4156 160 Q8NY95::Probable acetyl-CoA acyltransferase ::::Staphylococcus aureus (strain MW2) (taxid: 196620) confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 99.91::37-159 PF00108::Thiolase_N 100.00::37-158 GO:0005829::cytosol confident rp_1wl4_A_1::33-133 very confident psy4157 441 Q2YVF5::Probable acetyl-CoA acyltransferase ::::Staphylococcus aureus (strain bovine RF122 / ET3-1) (taxid: 273036) confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 99.96::209-438 PF00108::Thiolase_N 100.00::1-141 GO:0031090::organelle membrane confident hh_1wl4_A_1::209-248,250-440 very confident psy13266 280 P32020::Non-specific lipid-transfer protein ::Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.::Mus musculus (taxid: 10090) confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 99.83::3-126 PF02803::Thiolase_C 99.93::2-126 GO:0005730::nucleolus confident hh_1c44_A_1::154-269 very confident psy13256 216 P32020::Non-specific lipid-transfer protein ::Mediates in vitro the transfer of all common phospholipids, cholesterol and gangliosides between membranes. May play a role in regulating steroidogenesis.::Mus musculus (taxid: 10090) confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 100.00::10-216 PF02803::Thiolase_C 99.87::102-216 GO:0005730::nucleolus confident hh_1afw_A_1::15-105,107-121,131-131,133-178,197-216 very confident psy10774 207 P45369::Acetyl-CoA acetyltransferase ::::Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (taxid: 572477) confident COG0183::PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] 99.77::51-205 PF02803::Thiolase_C 99.96::105-205 GO:0005777::peroxisome confident hh_1wl4_A_1::49-77,86-205 very confident psy7749 319 P59224::40S ribosomal protein S13-2 ::::Arabidopsis thaliana (taxid: 3702) confident COG0184::RpsO Ribosomal protein S15P/S13E [Translation, ribosomal structure and biogenesis] 99.91::212-315 PF08069::Ribosomal_S13_N 99.98::169-228 GO:0005730::nucleolus very confident hh_2xzm_O_1::169-319 very confident psy2143 149 P62846::40S ribosomal protein S15 ::::Gallus gallus (taxid: 9031) very confident COG0185::RpsS Ribosomal protein S19 [Translation, ribosomal structure and biogenesis] 99.92::82-149 PF00203::Ribosomal_S19 99.78::84-149 GO:0000056::ribosomal small subunit export from nucleus confident hh_3iz6_R_1::39-149 very confident psy10000 193 Q3T0V4::40S ribosomal protein S11 ::::Bos taurus (taxid: 9913) very confident COG0186::RpsQ Ribosomal protein S17 [Translation, ribosomal structure and biogenesis] 100.00::98-185 PF00366::Ribosomal_S17 99.97::110-180 GO:0022627::cytosolic small ribosomal subunit very confident hh_3iz6_P_1::1-25,62-152,154-192 very confident psy13356 833 P22118::DNA gyrase subunit B ::DNA gyrase negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings.::Neisseria gonorrhoeae (taxid: 485) very confident COG0187::GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] 100.00::16-833 PF00204::DNA_gyraseB 100.00::250-425 GO:0009330::DNA topoisomerase complex (ATP-hydrolyzing) confident hh_2xcs_B_1::433-513,515-568,767-827,829-833 very confident psy13357 833 P22118::DNA gyrase subunit B ::DNA gyrase negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings.::Neisseria gonorrhoeae (taxid: 485) very confident COG0187::GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] 100.00::16-833 PF00204::DNA_gyraseB 100.00::250-425 GO:0009330::DNA topoisomerase complex (ATP-hydrolyzing) confident hh_2xcs_B_1::433-513,515-568,767-827,829-833 very confident psy13360 1161 Q89B37::DNA gyrase subunit B ::DNA gyrase negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings.::Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) (taxid: 224915) confident COG0187::GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] 100.00::344-1161 PF00204::DNA_gyraseB 100.00::578-753 GO:0009330::DNA topoisomerase complex (ATP-hydrolyzing) confident hh_2xcs_B_1::761-841,843-896,1095-1155,1157-1161 very confident psy14505 1619 P48369::DNA gyrase subunit A ::DNA gyrase negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings.::Aeromonas salmonicida (taxid: 645) confident COG0188::GyrA Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] 100.00::1-850 PF00521::DNA_topoisoIV 100.00::32-508 GO:0005618::cell wall confident hh_1zi0_A_1::540-642,647-749,751-850 very confident psy11240 363 P41516::DNA topoisomerase 2-alpha ::Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks.::Rattus norvegicus (taxid: 10116) confident COG0188::GyrA Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit [DNA replication, recombination, and repair] 100.00::86-353 PF00521::DNA_topoisoIV 100.00::109-345 GO:0042826::histone deacetylase binding confident hh_3qx3_A_1::2-358 very confident psy10837 316 O88935::Synapsin-1 ::Neuronal phosphoprotein that coats synaptic vesicles, binds to the cytoskeleton, and is believed to function in the regulation of neurotransmitter release. Regulation of neurotransmitter release. The complex formed with NOS1 and CAPON proteins is necessary for specific nitric-oxide functions at a presynaptic level.::Mus musculus (taxid: 10090) confident COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 95.25::168-314 PF02078::Synapsin 100.00::101-202 GO:0005829::cytosol confident hh_2p0a_A_1::103-213,220-254,258-315 very confident psy10366 340 O88935::Synapsin-1 ::Neuronal phosphoprotein that coats synaptic vesicles, binds to the cytoskeleton, and is believed to function in the regulation of neurotransmitter release. Regulation of neurotransmitter release. The complex formed with NOS1 and CAPON proteins is necessary for specific nitric-oxide functions at a presynaptic level.::Mus musculus (taxid: 10090) confident COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 100.00::10-225 PF02750::Synapsin_C 100.00::25-222 GO:0005829::cytosol confident hh_1pk8_A_1::5-225 very confident psy9333 308 Q5PPI9::Probable tubulin polyglutamylase TTLL1 ::Catalytic subunit of the neuronal tubulin polyglutamylase complex. Modifies alpha- and beta-tubulin, generating side chains of glutamate on the gamma-carboxyl groups of specific glutamate residues within the C-terminal tail of alpha- and beta-tubulin.::Rattus norvegicus (taxid: 10116) very confident COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 97.35::81-192 PF03133::TTL 100.00::25-302 GO:0004835::tubulin-tyrosine ligase activity confident hh_3tig_A_1::26-54,56-58,73-74,78-134,144-175,178-197,200-295 very confident psy11344 586 A4Q9E4::Probable tubulin polyglutamylase TTLL2 ::Probable tubulin polyglutamylase that forms polyglutamate side chains on tubulin. Probably acts when complexed with other proteins.::Mus musculus (taxid: 10090) portable COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 98.81::75-296 PF03133::TTL 100.00::39-321 GO:0018095::protein polyglutamylation confident hh_3tig_A_1::1-14,19-66,68-99,104-165,168-213,218-296 very confident psy9480 395 A8CVX7::Tubulin polyglutamylase ttll6 ::Polyglutamylase which preferentially modifies alpha-tubulin. Mediates tubulin polyglutamylation in cilia. Involved in the side-chain elongation step of the polyglutamylation reaction rather than in the initiation step. Required for formation of olfactory cilia.::Danio rerio (taxid: 7955) portable COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 99.09::82-341 PF03133::TTL 100.00::77-363 GO:0018095::protein polyglutamylation confident hh_3tig_A_1::34-106,108-197,200-220,224-249,251-296,307-341,348-363,370-384 very confident psy3860 119 A8CVX7::Tubulin polyglutamylase ttll6 ::Polyglutamylase which preferentially modifies alpha-tubulin. Mediates tubulin polyglutamylation in cilia. Involved in the side-chain elongation step of the polyglutamylation reaction rather than in the initiation step. Required for formation of olfactory cilia.::Danio rerio (taxid: 7955) portable COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 98.28::26-91 PF03133::TTL 99.98::1-118 GO:0018095::protein polyglutamylation confident hh_3tig_A_1::1-18,20-73,75-109 very confident psy3858 180 A8CVX7::Tubulin polyglutamylase ttll6 ::Polyglutamylase which preferentially modifies alpha-tubulin. Mediates tubulin polyglutamylation in cilia. Involved in the side-chain elongation step of the polyglutamylation reaction rather than in the initiation step. Required for formation of olfactory cilia.::Danio rerio (taxid: 7955) portable COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 97.70::93-173 PF03133::TTL 100.00::56-180 GO:0018095::protein polyglutamylation confident hh_3tig_A_1::14-84,86-175,178-180 very confident psy2625 396 A8CVX7::Tubulin polyglutamylase ttll6 ::Polyglutamylase which preferentially modifies alpha-tubulin. Mediates tubulin polyglutamylation in cilia. Involved in the side-chain elongation step of the polyglutamylation reaction rather than in the initiation step. Required for formation of olfactory cilia.::Danio rerio (taxid: 7955) portable COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 98.91::123-323 PF03133::TTL 100.00::65-346 GO:0043229::intracellular organelle confident hh_3tig_A_1::119-183,186-205,209-280,289-324,331-344 very confident psy10924 322 A4Q9F1::Protein monoglycylase TTLL8 ::Monoglycylase which modifies both tubulin and non-tubulin proteins, generating side chains of glycine on the gamma-carboxyl groups of specific glutamate residues of target proteins. Monoglycylates tubulin, with a preference for alpha-tubulin toward beta-tubulin. Has the ability to modify non-tubulin proteins such as ANP32A, ANP32B, SET and NCL. Involved in the side-chain initiation step of the glycylation reaction by adding a single glycine chain to generate monoglycine side chains. Not involved in elongation step of the polyglycylation reaction.::Mus musculus (taxid: 10090) portable COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 99.11::29-229 PF03133::TTL 100.00::4-254 GO:0044441::cilium part confident hh_3tig_A_1::8-17,22-60,65-95,98-140,144-166,169-190,193-229,236-259 very confident psy6987 204 Q8CHB8::Tubulin polyglutamylase TTLL5 ::Polyglutamylase which preferentially modifies alpha-tubulin. Involved in the side-chain initiation step of the polyglutamylation reaction rather than in the elongation step. Increases the effects of NCOA2 in glucocorticoid receptor-mediated repression and induction and in androgen receptor-mediated induction.::Mus musculus (taxid: 10090) confident COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 97.42::35-168 PF03133::TTL 100.00::33-196 GO:0044441::cilium part confident hh_3tig_A_1::2-62,65-151,154-175,178-201 very confident psy13386 714 A8CVX7::Tubulin polyglutamylase ttll6 ::Polyglutamylase which preferentially modifies alpha-tubulin. Mediates tubulin polyglutamylation in cilia. Involved in the side-chain elongation step of the polyglutamylation reaction rather than in the initiation step. Required for formation of olfactory cilia.::Danio rerio (taxid: 7955) portable COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 98.50::93-354 PF03133::TTL 100.00::91-375 GO:0070740::tubulin-glutamic acid ligase activity confident hh_3tig_A_1::50-121,123-212,215-235,239-263,265-312,321-355,362-375 very confident psy16684 429 Q641W7::Probable tubulin polyglutamylase TTLL9 ::Probable tubulin polyglutamylase that forms polyglutamate side chains on tubulin. Probably acts when complexed with other proteins.::Rattus norvegicus (taxid: 10116) confident COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 99.23::103-335 PF03133::TTL 100.00::58-358 GO:0070740::tubulin-glutamic acid ligase activity confident hh_3tig_A_1::18-27,29-87,89-91,100-158,178-209,212-335,342-357 very confident psy10158 1266 Q5REW0::Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 ::Bifunctional inositol kinase that catalyzes the formation of diphosphoinositol pentakisphosphate (InsP7 or PP-InsP5) and bi-diphosphoinositol tetrakisphosphate (InsP8 or PP2-InsP4). Converts inositolitol hexakisphosphate (InsP6) to InsP7. Also able to convert InsP7 to InsP8. Probably specifically mediates the formation of 4PP-InsP5 and 6PP-InsP5 InsP7 isomers but not of 5PP-IP5 InsP7 isomer.::Pongo abelii (taxid: 9601) very confident COG0189::RimK Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis] 99.94::52-330 PF08443::RimK 99.92::137-337 GO:0005829::cytosol confident hh_3t7a_A_1::46-372 very confident psy4615 477 Q99V34::Bifunctional protein FolD ::Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10-formyltetrahydrofolate.::Staphylococcus aureus (strain Mu50 / ATCC 700699) (taxid: 158878) portable COG0190::FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] 100.00::72-290 PF00763::THF_DHG_CYH 99.97::72-190 GO:0004488::methylenetetrahydrofolate dehydrogenase (NADP+) activity confident hh_4a26_A_1::70-134,136-143,145-153,156-289 very confident psy7981 216 O96553::C-1-tetrahydrofolate synthase, cytoplasmic ::::Drosophila melanogaster (taxid: 7227) confident COG0190::FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism] 100.00::11-214 PF00763::THF_DHG_CYH 100.00::11-131 GO:0005829::cytosol confident hh_3p2o_A_1::9-36,39-109,112-145,147-214 very confident psy10894 364 P31153::S-adenosylmethionine synthase isoform type-2 ::Catalyzes the formation of S-adenosylmethionine from methionine and ATP.::Homo sapiens (taxid: 9606) very confident COG0192::MetK S-adenosylmethionine synthetase [Coenzyme metabolism] 100.00::1-362 PF02773::S-AdoMet_synt_C 100.00::220-357 GO:0005829::cytosol very confident hh_2p02_A_1::1-363 very confident psy15208 1027 A3NER1::Adenosylhomocysteinase ::May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.::Burkholderia pseudomallei (strain 668) (taxid: 320373) confident COG0192::MetK S-adenosylmethionine synthetase [Coenzyme metabolism] 100.00::182-564 PF05221::AdoHcyase 100.00::564-1026 GO:0005829::cytosol confident hh_3iml_A_1::181-563 very confident psy18088 166 Q4FQY7::Guanylate kinase ::Essential for recycling GMP and indirectly, cGMP.::Psychrobacter arcticus (strain DSM 17307 / 273-4) (taxid: 259536) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 99.96::59-164 PF00625::Guanylate_kin 99.95::59-163 GO:0004385::guanylate kinase activity confident hh_1lvg_A_1::59-159 very confident psy10228 225 Q63622::Disks large homolog 2 ::Required for perception of chronic pain through NMDA receptor signaling. Regulates surface expression of NMDA receptors in dorsal horn neurons of the spinal cord. Interacts with the cytoplasmic tail of NMDA receptor subunits as well as inward rectifying potassium channels. Involved in regulation of synaptic stability at cholinergic synapses. Part of the postsynaptic protein scaffold of excitatory synapses.::Rattus norvegicus (taxid: 10116) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 100.00::49-212 PF00625::Guanylate_kin 100.00::50-212 GO:0004385::guanylate kinase activity confident rp_3tvt_A_1::66-225 very confident psy16887 160 Q95168::Tight junction protein ZO-2 ::Plays a role in tight junctions and adherens junctions.::Canis familiaris (taxid: 9615) portable COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 99.89::29-158 PF00625::Guanylate_kin 99.91::29-158 GO:0005737::cytoplasm confident hh_3tvt_A_1::13-116,120-159 very confident psy16959 366 Q9JLB2::MAGUK p55 subfamily member 5 ::May play a role in tight junctions biogenesis and in the establishment of cell polarity in epithelial cells. May modulate SC6A1/GAT1-mediated GABA uptake by stabilizing the transporter. Required for localization of EZR to the apical membrane of parietal cells and may play a role in the dynamic remodeling of the apical cytoskeleton.::Mus musculus (taxid: 10090) portable COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 99.96::103-359 PF00625::Guanylate_kin 99.96::104-355 GO:0005737::cytoplasm confident hh_2xkx_A_1::1-97,100-113,117-181,299-348,350-355 very confident psy9156 177 Q64520::Guanylate kinase ::Essential for recycling GMP and indirectly, cGMP.::Mus musculus (taxid: 10090) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 100.00::2-161 PF00625::Guanylate_kin 100.00::2-159 GO:0005829::cytosol confident hh_1kjw_A_1::2-96,100-117,119-124,127-160 very confident psy10229 231 Q28C55::Disks large homolog 1 ::Essential multidomain scaffolding protein required for normal development. Recruits channels, receptors and signaling molecules to discrete plasma membrane domains in polarized cells. May play a role in adherens junction assembly, signal transduction and cell proliferation.::Xenopus tropicalis (taxid: 8364) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 99.93::111-230 PF00625::Guanylate_kin 99.95::111-230 GO:0005923::tight junction confident hh_1kjw_A_1::11-28,32-76,82-83,85-86,88-162,165-184,192-231 very confident psy9827 627 O97758::Tight junction protein ZO-1 ::The N-terminal may be involved in transducing a signal required for tight junction assembly, while the C-terminal may have specific properties of tight junctions. The alpha domain might be involved in stabilizing junctions. Plays a role in the regulation of cell migration by targeting CDC42BPB to the leading edge of migrating cells.::Canis familiaris (taxid: 9615) portable COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 99.92::453-602 PF00625::Guanylate_kin 99.90::453-601 GO:0043231::intracellular membrane-bounded organelle confident hh_3kfv_A_1::312-324,328-328,334-348,350-417,419-484,488-491,497-503,507-538,541-613 very confident psy14166 264 Q5RDQ2::MAGUK p55 subfamily member 5 ::May play a role in tight junctions biogenesis and in the establishment of cell polarity in epithelial cells. May modulate SC6A1/GAT1-mediated GABA uptake by stabilizing the transporter. Required for localization of EZR to the apical membrane of parietal cells and may play a role in the dynamic remodeling of the apical cytoskeleton.::Pongo abelii (taxid: 9601) portable COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 100.00::109-245 PF00625::Guanylate_kin 100.00::110-241 GO:0043234::protein complex confident hh_3ney_A_1::109-234 very confident psy6910 1145 Q86UL8::Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 ::Seems to act as scaffold molecule at synaptic junctions by assembling neurotransmitter receptors and cell adhesion proteins. May play a role in regulating activin-mediated signaling in neuronal cells. Enhances the ability of PTEN to suppress AKT1 activation.::Homo sapiens (taxid: 9606) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 100.00::99-265 PF00625::Guanylate_kin 99.93::100-264 GO:0044464::cell part confident hh_2kpk_A_1::422-458,460-543 very confident psy4417 440 Q9NZW5::MAGUK p55 subfamily member 6 ::::Homo sapiens (taxid: 9606) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 100.00::163-420 PF00625::Guanylate_kin 99.97::163-419 GO:0044464::cell part confident hh_1kjw_A_1::97-115,118-192,200-276,285-294,304-309,313-318,334-334,349-352,375-430 very confident psy933 330 O14936::Peripheral plasma membrane protein CASK ::Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoring and ion channel trafficking. Contributes to neural development and regulation of gene expression via interaction with the transcription factor TRB1. Binds to cell-surface proteins, including amyloid precursor protein, neurexins and syndecans. May mediate a link between the extracellular matrix and the actin cytoskeleton via its interaction with syndecan and with the actin/spectrin-binding protein 4.1.::Homo sapiens (taxid: 9606) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 100.00::92-267 PF00625::Guanylate_kin 100.00::93-267 GO:0046928::regulation of neurotransmitter secretion confident hh_1kgd_A_1::90-267 very confident psy12793 352 Q24210::Peripheral plasma membrane protein CASK ::May regulate transmembrane proteins that bind calcium, calmodulin, or nucleotides. Functionally modulates eag potassium channels; increases eag current and whole-cell conductance. Also regulates autophosphorylation of CaMKII.::Drosophila melanogaster (taxid: 7227) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 99.81::187-350 PF00625::Guanylate_kin 99.80::188-350 GO:0046928::regulation of neurotransmitter secretion confident hh_1kjw_A_1::66-84,87-138,148-151,163-196,200-222,295-350 very confident psy6613 510 P54287::Voltage-dependent L-type calcium channel subunit beta-3 ::The beta subunit of voltage-dependent calcium channels contributes to the function of the calcium channel by increasing peak calcium current, shifting the voltage dependencies of activation and inactivation, modulating G protein inhibition and controlling the alpha-1 subunit membrane targeting.::Rattus norvegicus (taxid: 10116) confident COG0194::Gmk Guanylate kinase [Nucleotide transport and metabolism] 99.97::146-293 PF00625::Guanylate_kin 99.95::147-294 GO:0050852::T cell receptor signaling pathway confident hh_4dey_A_2::338-484,486-507 very confident psy7973 132 O76206::Putative riboflavin kinase ::Catalyzes the phosphorylation of riboflavin (vitamin B2) to form flavin-mononucleotide (FMN).::Drosophila melanogaster (taxid: 7227) confident COG0196::RibF FAD synthase [Coenzyme metabolism] 100.00::2-132 PF01687::Flavokinase 100.00::21-132 GO:0005739::mitochondrion confident hh_1nb0_A_1::21-74,76-132 very confident psy6080 240 Q5M818::39S ribosomal protein L16, mitochondrial ::Component of the large subunit of mitochondrial ribosome.::Rattus norvegicus (taxid: 10116) confident COG0197::RplP Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis] 100.00::52-191 PF00252::Ribosomal_L16 100.00::53-187 GO:0005762::mitochondrial large ribosomal subunit confident hh_2ftc_I_1::67-184 very confident psy1114 480 Q2TBW8::60S ribosomal protein L10-like ::::Bos taurus (taxid: 9913) confident COG0197::RplP Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis] 100.00::79-241 PF00252::Ribosomal_L16 99.97::72-234 GO:0043025::neuronal cell body confident hh_2zkr_h_2::341-452 very confident psy1816 122 Q2TBW8::60S ribosomal protein L10-like ::::Bos taurus (taxid: 9913) confident COG0197::RplP Ribosomal protein L16/L10E [Translation, ribosomal structure and biogenesis] 99.67::5-54 PF00252::Ribosomal_L16 99.37::1-53 GO:0043025::neuronal cell body confident hh_3j0l_J_1::1-77,82-98 very confident psy10530 141 P51414::60S ribosomal protein L26-1 ::::Arabidopsis thaliana (taxid: 3702) very confident COG0198::RplX Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] 99.86::58-132 PF00467::KOW 98.75::64-96 GO:0003723::RNA binding very confident bp_2zkr_t_1::14-139 very confident psy5495 273 Q9VMY1::Probable 39S ribosomal protein L24, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0198::RplX Ribosomal protein L24 [Translation, ribosomal structure and biogenesis] 99.96::152-251 PF00467::KOW 98.56::157-188 GO:0044464::cell part confident hh_3v2d_Y_1::152-212,214-254 very confident psy9697 128 A5EX86::30S ribosomal protein S14 ::Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.::Dichelobacter nodosus (strain VCS1703A) (taxid: 246195) confident COG0199::RpsN Ribosomal protein S14 [Translation, ribosomal structure and biogenesis] 99.91::75-128 PF00253::Ribosomal_S14 99.87::74-127 GO:0031965::nuclear membrane confident hh_2eo6_A_1::1-69,75-95 very confident psy6392 198 Q0VC21::39S ribosomal protein L15, mitochondrial ::::Bos taurus (taxid: 9913) confident COG0200::RplO Ribosomal protein L15 [Translation, ribosomal structure and biogenesis] 99.65::4-102 PF00828::Ribosomal_L18e 99.70::5-101 GO:0005739::mitochondrion confident hh_3v2d_P_1::4-31,33-34,36-36,43-57,63-72,75-77,79-102 confident psy5830 503 Q90YL4::Protein transport protein Sec61 subunit alpha-like 2 ::Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adaptor proteins.::Danio rerio (taxid: 7955) very confident COG0201::SecY Preprotein translocase subunit SecY [Intracellular trafficking and secretion] 100.00::12-494 PF00344::SecY 100.00::76-486 GO:0016020::membrane confident hh_2wwb_A_1::1-23,25-289,333-503 very confident psy5829 147 Q90YL4::Protein transport protein Sec61 subunit alpha-like 2 ::Appears to play a crucial role in the insertion of secretory and membrane polypeptides into the ER. It is required for assembly of membrane and secretory proteins. Found to be tightly associated with membrane-bound ribosomes, either directly or through adaptor proteins.::Danio rerio (taxid: 7955) confident COG0201::SecY Preprotein translocase subunit SecY [Intracellular trafficking and secretion] 99.50::20-88 PF00344::SecY 99.18::21-91 GO:0030176::integral to endoplasmic reticulum membrane confident hh_2wwb_A_1::16-130 very confident psy8862 265 P0AGA3::Protein translocase subunit SecY ::The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) confident COG0201::SecY Preprotein translocase subunit SecY [Intracellular trafficking and secretion] 100.00::4-257 PF00344::SecY 100.00::68-257 GO:0043022::ribosome binding confident hh_3j01_A_1::12-257 very confident psy5332 287 P19387::DNA-directed RNA polymerase II subunit RPB3 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB3 is part of the core element with the central large cleft and the clamp element that moves to open and close the cleft.::Homo sapiens (taxid: 9606) very confident COG0202::RpoA DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] 99.94::1-261 PF01000::RNA_pol_A_bac 99.97::6-133 GO:0005665::DNA-directed RNA polymerase II, core complex very confident hh_2pa8_D_1::1-63,65-86,101-221 very confident psy12829 181 P97760::DNA-directed RNA polymerase II subunit RPB3 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB3 is part of the core element with the central large cleft and the clamp element that moves to open and close the cleft.::Mus musculus (taxid: 10090) very confident COG0202::RpoA DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] 100.00::9-180 PF01000::RNA_pol_A_bac 100.00::50-177 GO:0005665::DNA-directed RNA polymerase II, core complex very confident hh_3h0g_C_1::5-132,142-181 very confident psy1865 152 O15160::DNA-directed RNA polymerases I and III subunit RPAC1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I and III which synthesize ribosomal RNA precursors and small RNAs, such as 5S rRNA and tRNAs, respectively. RPAC1 is part of the Pol core element with the central large cleft and probably a clamp element that moves to open and close the cleft.::Homo sapiens (taxid: 9606) confident COG0202::RpoA DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] 99.67::8-138 PF01000::RNA_pol_A_bac 99.75::8-104 GO:0005875::microtubule associated complex confident hh_1twf_C_1::7-29,43-55,57-121 very confident psy8861 550 A6T3H9::30S ribosomal protein S4 ::With S5 and S12 plays an important role in translational accuracy.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0202::RpoA DNA-directed RNA polymerase, alpha subunit/40 kD subunit [Transcription] 100.00::199-437 PF01196::Ribosomal_L17 100.00::449-545 GO:0045947::negative regulation of translational initiation confident hh_3r8s_N_1::430-548 very confident psy14597 191 Q5RCA3::39S ribosomal protein L17, mitochondrial ::::Pongo abelii (taxid: 9601) confident COG0203::RplQ Ribosomal protein L17 [Translation, ribosomal structure and biogenesis] 100.00::17-126 PF01196::Ribosomal_L17 100.00::36-126 GO:0005743::mitochondrial inner membrane confident hh_2cqm_A_1::29-109,115-140 very confident psy8441 234 Q6IV84::Tafazzin ::Some isoforms may be involved in cardiolipin metabolism.::Pan troglodytes (taxid: 9598) portable COG0204::PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] 99.37::124-228 PF01553::Acyltransferase 99.02::143-225 GO:0032577::phosphatidylcholine:cardiolipin O-linoleoyltransferase activity confident hh_1iuq_A_1::126-141,143-195,198-214,216-223 portable psy12561 139 O25903::1-acyl-sn-glycerol-3-phosphate acyltransferase ::Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position.::Helicobacter pylori (strain ATCC 700392 / 26695) (taxid: 85962) portable COG0204::PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] 99.92::2-138 PF01553::Acyltransferase 99.85::2-112 GO:0043231::intracellular membrane-bounded organelle confident hh_1iuq_A_1::2-48,50-82,84-139 confident psy12284 183 Q08650::Diacylglycerol O-acyltransferase 1 ::Catalyzes the terminal and only committed step in triacylglycerol synthesis by using diacylglycerol and fatty acyl CoA as substrates. Required for storage lipid synthesis. May be involved in lipid particle synthesis from the endoplasmic reticulum and ergosterol biosynthesis. Also has monoacylglycerol acyltransferase (MGAT) activity, catalyzing the acyl-CoA-dependent esterification of monoacylglycerol to diacylglycerol.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0204::PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] 99.47::3-80 PF03982::DAGAT 100.00::2-183 GO:0004144::diacylglycerol O-acyltransferase activity confident hh_1iuq_A_1::17-36,41-48,50-74,76-81,87-91,99-104,120-172 confident psy3418 119 Q95JH2::1-acyl-sn-glycerol-3-phosphate acyltransferase alpha ::Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating an acyl moiety at the sn-2 position of the glycerol backbone.::Bos taurus (taxid: 9913) portable COG0204::PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] 97.96::19-106 PF03982::DAGAT 95.24::65-110 GO:0044424::intracellular part confident hh_1iuq_A_1::30-32,39-51,53-109 confident psy8442 130 Q6IV77::Tafazzin ::Some isoforms may be involved in cardiolipin metabolism.::Macaca mulatta (taxid: 9544) confident COG0204::PlsC 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism] 97.95::9-82 PF03982::DAGAT 95.86::30-109 GO:0044464::cell part confident hh_1iuq_A_1::12-49,51-58,60-64,66-84,89-125 portable psy5987 197 Q9WUA3::6-phosphofructokinase type C ::::Mus musculus (taxid: 10090) confident COG0205::PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] 100.00::2-196 PF00365::PFK 100.00::2-196 GO:0003872::6-phosphofructokinase activity very confident hh_3o8l_A_1::2-196 very confident psy5985 153 P17858::6-phosphofructokinase, liver type ::::Homo sapiens (taxid: 9606) confident COG0205::PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] 100.00::1-141 PF00365::PFK 100.00::1-142 GO:0030388::fructose 1,6-bisphosphate metabolic process confident hh_3o8l_A_1::1-142 very confident psy5988 68 Q9WUA3::6-phosphofructokinase type C ::::Mus musculus (taxid: 10090) confident COG0205::PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] 99.69::14-67 PF00365::PFK 99.62::14-67 GO:0046835::carbohydrate phosphorylation confident hh_3o8o_A_1::9-68 very confident psy5984 512 P00511::6-phosphofructokinase, muscle type ::::Oryctolagus cuniculus (taxid: 9986) confident COG0205::PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] 99.97::323-493 PF00365::PFK 99.97::323-492 GO:0070061::fructose binding confident hh_3o8l_A_1::1-16,27-157,164-184,192-345,351-360,371-412,419-460,462-511 very confident psy2355 452 P45352::Thymidylate synthase ::Contributes to the de novo mitochondrial thymidylate biosynthesis pathway.::Rattus norvegicus (taxid: 10116) confident COG0207::ThyA Thymidylate synthase [Nucleotide transport and metabolism] 100.00::74-314 PF00303::Thymidylat_synt 100.00::74-333 GO:0006231::dTMP biosynthetic process confident hh_2zkr_q_1::294-452 very confident psy2405 264 Q8ZHV1::Thymidylate synthase ::Provides the sole de novo source of dTMP for DNA biosynthesis.::Yersinia pestis (taxid: 632) very confident COG0207::ThyA Thymidylate synthase [Nucleotide transport and metabolism] 100.00::1-264 PF00303::Thymidylat_synt 100.00::1-264 GO:0006231::dTMP biosynthetic process very confident rp_3ix6_A_1::1-264 very confident psy8868 355 Q9PL92::Ribonucleoside-diphosphate reductase subunit beta ::Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.::Chlamydia muridarum (strain MoPn / Nigg) (taxid: 243161) very confident COG0208::NrdF Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism] 100.00::15-352 PF00268::Ribonuc_red_sm 100.00::34-327 GO:0004748::ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor confident hh_1syy_A_1::16-73,75-316,318-354 very confident psy8867 355 Q9PL92::Ribonucleoside-diphosphate reductase subunit beta ::Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.::Chlamydia muridarum (strain MoPn / Nigg) (taxid: 243161) very confident COG0208::NrdF Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism] 100.00::15-352 PF00268::Ribonuc_red_sm 100.00::34-327 GO:0009265::2'-deoxyribonucleotide biosynthetic process confident hh_1syy_A_1::16-73,75-316,318-354 very confident psy7988 73 Q5R9G0::Ribonucleoside-diphosphate reductase subunit M2 B ::Plays a pivotal role in cell survival by repairing damaged DNA in a p53/TP53-dependent manner. Supplies deoxyribonucleotides for DNA repair in cells arrested at G1 or G2. Contains an iron-tyrosyl free radical center required for catalysis. Forms an active ribonucleotide reductase (RNR) complex with RRM1 which is expressed both in resting and proliferating cells in response to DNA damage.::Pongo abelii (taxid: 9601) confident COG0208::NrdF Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism] 99.11::14-60 PF00268::Ribonuc_red_sm 96.46::14-35 GO:0055114::oxidation-reduction process confident hh_1jk0_A_1::14-73 very confident psy4803 235 Q9LSD0::Ribonucleoside-diphosphate reductase small chain C ::Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.::Arabidopsis thaliana (taxid: 3702) confident COG0208::NrdF Ribonucleotide reductase, beta subunit [Nucleotide transport and metabolism] 100.00::82-230 PF00268::Ribonuc_red_sm 99.94::3-197 GO:0055114::oxidation-reduction process confident hh_1jk0_A_1::3-33,35-56,62-66,82-95,99-235 very confident psy15804 193 P21524::Ribonucleoside-diphosphate reductase large chain 1 ::Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0209::NrdA Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism] 99.96::5-191 PF00317::Ribonuc_red_lgN 99.91::108-181 GO:0009263::deoxyribonucleotide biosynthetic process confident hh_3hnc_A_1::2-31,33-43,45-173,176-191 very confident psy1689 998 P07742::Ribonucleoside-diphosphate reductase large subunit ::Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.::Mus musculus (taxid: 10090) confident COG0209::NrdA Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism] 100.00::71-552 PF02867::Ribonuc_red_lgC 100.00::69-538 GO:0005635::nuclear envelope confident hh_3hnc_A_2::586-665,779-963,965-969,973-975,978-998 very confident psy8865 749 Q9SJ20::Ribonucleoside-diphosphate reductase large subunit ::Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. R1 contains the binding sites for both substrates and allosteric effectors and carries out the actual reduction of the ribonucleotide.::Arabidopsis thaliana (taxid: 3702) confident COG0209::NrdA Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism] 100.00::2-703 PF02867::Ribonuc_red_lgC 100.00::153-690 GO:0005829::cytosol confident hh_2wgh_A_1::8-28,31-35,41-117,121-313,317-318,321-512,525-696 very confident psy8864 749 Q9SJ20::Ribonucleoside-diphosphate reductase large subunit ::Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. R1 contains the binding sites for both substrates and allosteric effectors and carries out the actual reduction of the ribonucleotide.::Arabidopsis thaliana (taxid: 3702) confident COG0209::NrdA Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism] 100.00::2-703 PF02867::Ribonuc_red_lgC 100.00::153-690 GO:0005829::cytosol confident hh_2wgh_A_1::8-28,31-35,41-117,121-313,317-318,321-512,525-696 very confident psy12659 1051 Q8CFQ3::Intron-binding protein aquarius ::Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre-mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.::Mus musculus (taxid: 10090) portable COG0210::UvrD Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair] 97.76::177-246 PF13086::AAA_11 99.85::177-270 GO:0005618::cell wall confident hh_4b3f_X_1::114-167,171-219,222-247,251-270 very confident psy7634 206 Q9P0M9::39S ribosomal protein L27, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG0211::RpmA Ribosomal protein L27 [Translation, ribosomal structure and biogenesis] 100.00::25-137 PF01016::Ribosomal_L27 100.00::26-133 GO:0005739::mitochondrion confident hh_2ftc_O_1::26-45,49-68,71-99 very confident psy1330 221 C3MBH0::Thymidine phosphorylase ::The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.::Rhizobium sp. (strain NGR234) (taxid: 394) confident COG0213::DeoA Thymidine phosphorylase [Nucleotide transport and metabolism] 100.00::1-221 PF00591::Glycos_transf_3 100.00::78-210 GO:0016763::transferase activity, transferring pentosyl groups confident hh_2dsj_A_1::3-221 very confident psy11866 255 Q5F408::Cysteine--tRNA ligase, cytoplasmic ::::Gallus gallus (taxid: 9031) confident COG0215::CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::2-255 PF01406::tRNA-synt_1e 99.94::2-78 GO:0005524::ATP binding confident hh_1li5_A_1::2-11,13-79,83-90,95-98,102-105,112-112,114-114,120-158,160-160,162-191,193-194,197-202,206-214,219-229,233-242,244-255 very confident psy14486 472 Q60BG8::Cysteine--tRNA ligase ::::Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) (taxid: 243233) very confident COG0215::CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::3-472 PF01406::tRNA-synt_1e 100.00::17-322 GO:0005829::cytosol confident hh_3tqo_A_1::1-2,4-140,145-198,202-339,344-409,411-412,419-465,467-472 very confident psy14487 472 Q60BG8::Cysteine--tRNA ligase ::::Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) (taxid: 243233) very confident COG0215::CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::3-472 PF01406::tRNA-synt_1e 100.00::17-322 GO:0005829::cytosol confident hh_1li5_A_1::4-140,145-198,202-340,344-412,418-465,467-472 very confident psy4479 135 Q9H3J6::Probable peptide chain release factor C12orf65, mitochondrial ::May act as a codon-independent translation release factor that has lost all stop codon specificity and directs the termination of translation in mitochondrion.::Homo sapiens (taxid: 9606) confident COG0216::PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis] 100.00::5-94 PF00472::RF-1 99.97::21-93 GO:0003747::translation release factor activity confident hh_2rsm_A_1::7-16,18-98 very confident psy2492 162 Q9H3J6::Probable peptide chain release factor C12orf65, mitochondrial ::May act as a codon-independent translation release factor that has lost all stop codon specificity and directs the termination of translation in mitochondrion.::Homo sapiens (taxid: 9606) confident COG0216::PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis] 100.00::2-119 PF00472::RF-1 99.96::47-118 GO:0003747::translation release factor activity confident hh_2rsm_A_1::28-123 very confident psy8866 278 A6SXF4::Peptide chain release factor 2 ::Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) very confident COG0216::PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis] 100.00::1-275 PF00472::RF-1 100.00::135-243 GO:0005618::cell wall confident hh_1gqe_A_1::1-270 very confident psy15210 278 A6SXF4::Peptide chain release factor 2 ::Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) very confident COG0216::PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis] 100.00::1-275 PF00472::RF-1 100.00::135-243 GO:0005618::cell wall confident hh_1gqe_A_1::1-270 very confident psy1690 218 Q0BUJ8::Peptide chain release factor 1 ::Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.::Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) (taxid: 391165) confident COG0216::PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis] 100.00::1-217 PF00472::RF-1 99.98::28-179 GO:0005739::mitochondrion confident hh_2b3t_B_1::1-106,110-124,152-156,167-167,170-194,197-217 very confident psy2394 570 Q62DF3::Peptide chain release factor 1 ::Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.::Burkholderia mallei (strain ATCC 23344) (taxid: 243160) confident COG0216::PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis] 100.00::1-314 PF03462::PCRF 99.97::70-178 GO:0005739::mitochondrion confident hh_2b3t_B_1::1-314 very confident psy2395 570 Q62DF3::Peptide chain release factor 1 ::Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.::Burkholderia mallei (strain ATCC 23344) (taxid: 243160) confident COG0216::PrfA Protein chain release factor A [Translation, ribosomal structure and biogenesis] 100.00::1-314 PF03462::PCRF 99.97::70-178 GO:0005739::mitochondrion confident hh_1rq0_A_1::13-28,31-56,61-74,79-102,106-213,215-314 very confident psy8853 242 B2U8Z2::Probable transcriptional regulatory protein Rpic_2388 ::::Ralstonia pickettii (strain 12J) (taxid: 402626) very confident COG0217::Uncharacterized conserved protein [Function unknown] 100.00::1-241 PF01709::Transcrip_reg 100.00::5-239 GO:0005739::mitochondrion confident hh_1lfp_A_1::1-75,78-166,168-242 very confident psy13086 169 Q9Z120::tRNA (guanine-N(7)-)-methyltransferase ::Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.::Mus musculus (taxid: 10090) confident COG0220::Predicted S-adenosylmethionine-dependent methyltransferase [General function prediction only] 100.00::2-167 PF02390::Methyltransf_4 100.00::1-166 GO:0043527::tRNA methyltransferase complex confident hh_3ckk_A_1::1-132,134-168 very confident psy300 451 O77460::Inorganic pyrophosphatase ::Component of NURF (nucleosome remodeling factor), a complex which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. NURF is required for homeotic gene expression, proper larval blood cell development, normal male X chromosome morphology, ecdysteroid signaling and metamorphosis. Nurf-38 may have adapted to deliver pyrophosphatase to chromatin to assist in replication or transcription by efficient removal of the inhibitory metabolite.::Drosophila melanogaster (taxid: 7227) confident COG0221::Ppa Inorganic pyrophosphatase [Energy production and conversion] 100.00::165-363 PF00719::Pyrophosphatase 100.00::182-363 GO:0005773::vacuole confident hh_3q46_A_1::164-174,176-199,211-238,251-315,319-346,348-366 very confident psy4492 96 Q7YR75::39S ribosomal protein L12, mitochondrial ::::Bos taurus (taxid: 9913) confident COG0222::RplL Ribosomal protein L7/L12 [Translation, ribosomal structure and biogenesis] 99.97::22-96 PF00542::Ribosomal_L12 99.93::27-96 GO:0044699::single-organism process confident hh_2ftc_E_1::20-96 very confident psy16774 124 Q8K009::Mitochondrial 10-formyltetrahydrofolate dehydrogenase ::::Mus musculus (taxid: 10090) confident COG0223::Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] 99.34::62-113 PF00551::Formyl_trans_N 97.89::62-99 GO:0005739::mitochondrion confident hh_2bw0_A_1::41-52,57-58,60-112 very confident psy16773 124 Q8K009::Mitochondrial 10-formyltetrahydrofolate dehydrogenase ::::Mus musculus (taxid: 10090) confident COG0223::Fmt Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis] 99.34::62-113 PF00551::Formyl_trans_N 97.89::62-99 GO:0005739::mitochondrion confident hh_2bw0_A_1::41-52,57-58,60-112 very confident psy9628 112 O01666::ATP synthase subunit gamma, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and the central stalk which is part of the complex rotary element. The gamma subunit protrudes into the catalytic domain formed of alpha(3)beta(3). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.::Drosophila melanogaster (taxid: 7227) confident COG0224::AtpG F0F1-type ATP synthase, gamma subunit [Energy production and conversion] 99.78::8-93 PF00231::ATP-synt 99.62::8-90 GO:0005811::lipid particle confident hh_2xok_G_1::16-61,63-92 very confident psy2901 265 Q5P4E3::ATP synthase gamma chain ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.::Aromatoleum aromaticum (strain EbN1) (taxid: 76114) confident COG0224::AtpG F0F1-type ATP synthase, gamma subunit [Energy production and conversion] 100.00::1-265 PF00231::ATP-synt 100.00::1-265 GO:0015986::ATP synthesis coupled proton transport confident hh_2xok_G_1::1-42,48-81,84-88,91-170,175-178,180-188,190-265 very confident psy2900 265 Q5P4E3::ATP synthase gamma chain ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.::Aromatoleum aromaticum (strain EbN1) (taxid: 76114) confident COG0224::AtpG F0F1-type ATP synthase, gamma subunit [Energy production and conversion] 100.00::1-265 PF00231::ATP-synt 100.00::1-265 GO:0015986::ATP synthesis coupled proton transport confident hh_2xok_G_1::1-42,48-81,84-88,91-170,175-178,180-188,190-265 very confident psy9619 407 Q5RBS9::ATP synthase subunit gamma, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and the central stalk which is part of the complex rotary element. The gamma subunit protrudes into the catalytic domain formed of alpha(3)beta(3). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.::Pongo abelii (taxid: 9601) confident COG0224::AtpG F0F1-type ATP synthase, gamma subunit [Energy production and conversion] 100.00::24-407 PF00231::ATP-synt 100.00::21-407 GO:0070013::intracellular organelle lumen confident hh_2xok_G_1::13-81,84-121,124-170,172-172,286-330,332-407 very confident psy9119 250 A4TRL2::Peptide methionine sulfoxide reductase MsrA ::Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.::Yersinia pestis (strain Pestoides F) (taxid: 386656) portable COG0225::MsrA Peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones] 100.00::3-122 PF01625::PMSR 100.00::2-119 GO:0005737::cytoplasm confident hh_3pim_A_1::4-16,18-107,112-118 very confident psy3482 279 Q9VMX0::39S ribosomal protein L28, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0227::RpmB Ribosomal protein L28 [Translation, ribosomal structure and biogenesis] 99.87::81-155 PF00830::Ribosomal_L28 99.81::83-145 GO:0005761::mitochondrial ribosome confident hh_3bbo_Y_1::76-102,105-144,146-154 confident psy14541 103 Q9V6Y3::Probable 28S ribosomal protein S16, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0228::RpsP Ribosomal protein S16 [Translation, ribosomal structure and biogenesis] 99.89::1-56 PF00886::Ribosomal_S16 99.81::1-45 GO:0043231::intracellular membrane-bounded organelle confident hh_3bbn_P_1::1-20,26-40,42-64 very confident psy12346 107 Q3Z2B6::Peptide methionine sulfoxide reductase MsrB ::::Shigella sonnei (strain Ss046) (taxid: 300269) confident COG0229::Conserved domain frequently associated with peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones] 100.00::10-106 PF01641::SelR 100.00::14-106 GO:0005829::cytosol confident hh_2l1u_A_1::15-106 very confident psy4120 95 Q48FR2::Peptide methionine sulfoxide reductase MsrB ::::Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) (taxid: 264730) confident COG0229::Conserved domain frequently associated with peptide methionine sulfoxide reductase [Posttranslational modification, protein turnover, chaperones] 100.00::10-93 PF01641::SelR 100.00::14-92 GO:0005829::cytosol confident hh_3hcg_A_1::10-93 very confident psy17065 150 Q09121::Eukaryotic translation initiation factor 5A-1 ::mRNA-binding protein involved in translation elongation. Has an important function at the level of mRNA turnover, probably acting downstream of decapping. Involved in actin dynamics and cell cycle progression, mRNA decay and probably in a pathway involved in stress response and maintenance of cell wall integrity. Functions as a regulator of apoptosis. Mediates effects of polyamines on neuronal process extension and survival. May play an important role in brain development and function, and in skeletal muscle stem cell differentiation.::Gallus gallus (taxid: 9031) very confident COG0231::Efp Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) [Translation, ribosomal structure and biogenesis] 100.00::20-147 PF08207::EFP_N 99.86::23-81 GO:0008284::positive regulation of cell proliferation very confident hh_3cpf_A_1::16-97,99-112,114-150 very confident psy12951 111 A5G9I1::10 kDa chaperonin ::Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.::Geobacter uraniireducens (strain Rf4) (taxid: 351605) very confident COG0234::GroS Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones] 100.00::14-109 PF00166::Cpn10 100.00::15-107 GO:0005829::cytosol confident hh_1we3_O_1::13-108 very confident psy12488 91 Q4FPA6::10 kDa chaperonin ::Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.::Pelagibacter ubique (strain HTCC1062) (taxid: 335992) confident COG0234::GroS Co-chaperonin GroES (HSP10) [Posttranslational modification, protein turnover, chaperones] 100.00::6-89 PF00166::Cpn10 99.96::7-87 GO:0005829::cytosol confident hh_1we3_O_1::6-88 very confident psy13497 262 Q9WVQ5::Probable methylthioribulose-1-phosphate dehydratase ::Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Has an anti-apoptotic function and prevents muscle ischemic damage. Inhibits the cytochrome c-dependent and APAF1-mediated cell death.::Mus musculus (taxid: 10090) very confident COG0235::AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] 100.00::12-259 PF00596::Aldolase_II 100.00::19-249 GO:0005829::cytosol confident hh_2irp_A_1::15-76,78-79,84-123,125-127,162-175,179-180,183-255 very confident psy14071 414 Q63028::Alpha-adducin ::Membrane-cytoskeleton-associated protein that promotes the assembly of the spectrin-actin network. Binds to calmodulin.::Rattus norvegicus (taxid: 10116) confident COG0235::AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism] 100.00::80-290 PF00596::Aldolase_II 100.00::87-269 GO:0042221::response to chemical stimulus confident hh_3ocr_A_1::77-150,152-232,234-299,322-339,342-344 very confident psy11967 539 P47967::Galectin-5 ::May function in erythrocyte differentiation.::Rattus norvegicus (taxid: 10116) portable COG0236::AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 97.96::352-419 PF00337::Gal-bind_lectin 99.98::104-235 GO:0005737::cytoplasm confident hh_2wsu_A_1::100-139,143-175,178-214,217-239,241-243,257-257,285-285,287-291,332-332,380-380,417-417,421-421,432-437,439-510,513-536 very confident psy17138 212 O34932::Dephospho-CoA kinase ::Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A.::Bacillus subtilis (strain 168) (taxid: 224308) confident COG0237::CoaE Dephospho-CoA kinase [Coenzyme metabolism] 99.95::76-211 PF01121::CoaE 99.97::77-211 GO:0004140::dephospho-CoA kinase activity confident hh_2f6r_A_1::13-36,38-211 very confident psy1551 190 Q767K8::28S ribosomal protein S18b, mitochondrial ::::Sus scrofa (taxid: 9823) confident COG0238::RpsR Ribosomal protein S18 [Translation, ribosomal structure and biogenesis] 99.92::107-171 PF01084::Ribosomal_S18 99.88::119-171 GO:0005739::mitochondrion confident hh_2vqe_R_1::108-137,139-178 confident psy6417 194 P57741::Probable prefoldin subunit 3 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.::Arabidopsis thaliana (taxid: 3702) confident COG0238::RpsR Ribosomal protein S18 [Translation, ribosomal structure and biogenesis] 99.03::152-192 PF02996::Prefoldin 99.42::18-91 GO:0005829::cytosol confident hh_3i1m_R_1::153-185,187-192 confident psy14065 492 Q27928::Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG0240::GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] 100.00::1-310 PF07479::NAD_Gly3P_dh_C 100.00::156-305 GO:0030018::Z disc very confident hh_1x0v_A_1::1-88,90-206,209-311 very confident psy4598 369 O13911::Bifunctional polynucleotide phosphatase/kinase ::Catalyzes the phosphorylation of DNA at 5'-hydroxyl termini and can dephosphorylate its 3'-phosphate termini. Has a role in the repair of breaks in single stranded DNA.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0241::HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] 99.97::25-180 PF08645::PNK3P 100.00::26-187 GO:0003690::double-stranded DNA binding confident hh_3zvl_A_1::3-9,12-195,197-214,232-235,266-368 very confident psy2880 166 Q1QET1::Peptide deformylase ::Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.::Psychrobacter cryohalolentis (strain K5) (taxid: 335284) very confident COG0242::Def N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis] 100.00::1-164 PF01327::Pep_deformylase 100.00::3-153 GO:0035601::protein deacylation confident hh_3u04_A_1::1-165 very confident psy14392 164 Q7W0Q0::Peptide deformylase 1 ::Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.::Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) (taxid: 257313) confident COG0242::Def N-formylmethionyl-tRNA deformylase [Translation, ribosomal structure and biogenesis] 100.00::1-150 PF01327::Pep_deformylase 100.00::1-141 GO:0035601::protein deacylation confident hh_3svj_P_1::1-45,49-49,52-72,74-142 very confident psy17475 346 P19889::60S acidic ribosomal protein P0 ::Ribosomal protein P0 is the functional equivalent of E.coli protein L10.::Drosophila melanogaster (taxid: 7227) very confident COG0244::RplJ Ribosomal protein L10 [Translation, ribosomal structure and biogenesis] 99.92::1-177 PF00466::Ribosomal_L10 99.72::2-88 GO:0005811::lipid particle very confident no hit no match psy15723 243 A4FV84::mRNA turnover protein 4 homolog ::Involved in mRNA turnover and ribosome assembly.::Bos taurus (taxid: 9913) very confident COG0244::RplJ Ribosomal protein L10 [Translation, ribosomal structure and biogenesis] 99.97::19-211 PF00466::Ribosomal_L10 99.89::18-120 GO:0031965::nuclear membrane very confident no hit no match psy5289 813 O24617::DNA mismatch repair protein MSH2 ::Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair.::Arabidopsis thaliana (taxid: 3702) confident COG0249::MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] 100.00::4-746 PF00488::MutS_V 100.00::509-743 GO:0000217::DNA secondary structure binding confident hh_1wb9_A_1::4-42,46-60,66-108,112-132,134-136,139-141,146-175,181-247,250-250,252-297,301-307,309-398,402-504,507-516,519-548,550-744 very confident psy13255 156 A6W1Q6::DNA mismatch repair protein MutS ::This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.::Marinomonas sp. (strain MWYL1) (taxid: 400668) confident COG0249::MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] 100.00::22-156 PF00488::MutS_V 99.95::44-156 GO:0016887::ATPase activity confident hh_1wb9_A_1::22-29,31-156 very confident psy13254 132 Q9VUM0::Probable DNA mismatch repair protein Msh6 ::Involved in post-replicative DNA-mismatch repair.::Drosophila melanogaster (taxid: 7227) confident COG0249::MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] 99.97::2-132 PF01624::MutS_I 99.82::3-71 GO:0044428::nuclear part confident hh_2o8b_B_1::2-132 very confident psy13391 146 P43246::DNA mismatch repair protein Msh2 ::Component of the post-replicative DNA mismatch repair system (MMR). Forms two different heterodimers: MutS alpha (MSH2-MSH6 heterodimer) and MutS beta (MSH2-MSH3 heterodimer) which binds to DNA mismatches thereby initiating DNA repair. When bound, heterodimers bend the DNA helix and shields approximately 20 base pairs. MutS alpha recognizes single base mismatches and dinucleotide insertion-deletion loops (IDL) in the DNA. MutS beta recognizes larger insertion-deletion loops up to 13 nucleotides long. After mismatch binding, MutS alpha or beta forms a ternary complex with the MutL alpha heterodimer, which is thought to be responsible for directing the downstream MMR events, including strand discrimination, excision, and resynthesis. ATP binding and hydrolysis play a pivotal role in mismatch repair functions. The ATPase activity associated with MutS alpha regulates binding similar to a molecular switch: mismatched DNA provokes ADP-->ATP exchange, resulting in a discernible conformational transition that converts MutS alpha into a sliding clamp capable of hydrolysis-independent diffusion along the DNA backbone. This transition is crucial for mismatch repair. MutS alpha may also play a role in DNA homologous recombination repair. In melanocytes may modulate both UV-B-induced cell cycle regulation and apoptosis.::Homo sapiens (taxid: 9606) portable COG0249::MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] 99.83::1-143 PF05192::MutS_III 99.62::1-117 GO:0005634::nucleus confident hh_3thx_A_1::1-120,122-142 very confident psy13262 229 A7HZ64::DNA mismatch repair protein MutS ::This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.::Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) (taxid: 402881) portable COG0249::MutS Mismatch repair ATPase (MutS family) [DNA replication, recombination, and repair] 99.85::116-228 PF10240::DUF2464 99.86::14-129 GO:0044446::intracellular organelle part confident hh_1wb9_A_1::58-90,92-147,152-179,186-187,195-228 very confident psy15370 393 Q8K339::DNA/RNA-binding protein KIN17 ::Involved in DNA replication and the cellular response to DNA damage. May participate in DNA replication factories and create a bridge between DNA replication and repair mediated by high molecular weight complexes. May play a role in illegitimate recombination and regulation of gene expression. May participate in mRNA processing. Binds, in vitro, to double-stranded DNA. Also shown to bind preferentially to curved DNA in vitro and in vivo. Binds via its C-terminal domain to RNA in vitro.::Mus musculus (taxid: 10090) confident COG0250::NusG Transcription antiterminator [Transcription] 92.61::336-392 PF10357::Kin17_mid 100.00::52-178 GO:0016363::nuclear matrix confident hh_2v1n_A_1::51-160 very confident psy15371 393 Q8K339::DNA/RNA-binding protein KIN17 ::Involved in DNA replication and the cellular response to DNA damage. May participate in DNA replication factories and create a bridge between DNA replication and repair mediated by high molecular weight complexes. May play a role in illegitimate recombination and regulation of gene expression. May participate in mRNA processing. Binds, in vitro, to double-stranded DNA. Also shown to bind preferentially to curved DNA in vitro and in vivo. Binds via its C-terminal domain to RNA in vitro.::Mus musculus (taxid: 10090) confident COG0250::NusG Transcription antiterminator [Transcription] 92.61::336-392 PF10357::Kin17_mid 100.00::52-178 GO:0016363::nuclear matrix confident hh_2v1n_A_1::51-160 very confident psy1836 127 O25598::RutC family protein HP_0944 ::::Helicobacter pylori (strain ATCC 700392 / 26695) (taxid: 85962) confident COG0251::TdcF Putative translation initiation inhibitor, yjgF family [Translation, ribosomal structure and biogenesis] 100.00::10-123 PF01042::Ribonuc_L-PSP 100.00::11-123 GO:0019239::deaminase activity confident hh_1qah_A_1::12-113,115-123 very confident psy9757 659 O88202::60 kDa lysophospholipase ::Exhibits lysophospholipase, transacylase, PAF acetylhydrolase and asparaginase activities.::Rattus norvegicus (taxid: 10116) confident COG0252::AnsB L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis] 100.00::71-425 PF00710::Asparaginase 100.00::76-418 GO:0006644::phospholipid metabolic process confident hh_2him_A_1::72-94,96-117,139-289,291-343,345-409,411-431 very confident psy12401 255 O88202::60 kDa lysophospholipase ::Exhibits lysophospholipase, transacylase, PAF acetylhydrolase and asparaginase activities.::Rattus norvegicus (taxid: 10116) portable COG0252::AnsB L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D [Amino acid transport and metabolism / Translation, ribosomal structure and biogenesis] 100.00::45-252 PF00710::Asparaginase 100.00::50-253 GO:0042802::identical protein binding confident hh_2him_A_1::46-67,69-91,108-108,114-254 very confident psy8363 536 Q9SF53::60S ribosomal protein L35-1 ::::Arabidopsis thaliana (taxid: 3702) confident COG0255::RpmC Ribosomal protein L29 [Translation, ribosomal structure and biogenesis] 99.77::312-374 PF09606::Med15 100.00::1-305 GO:0005634::nucleus confident hh_2zkr_v_1::306-379,382-429 very confident psy5246 119 Q3ZBR7::39S ribosomal protein L18, mitochondrial ::Together with thiosulfate sulfurtransferase (TST), acts as a mitochondrial import factor for the cytosolic 5S rRNA. The precursor form shows RNA chaperone activity; is able to fold the 5S rRNA into an import-competent conformation that is recognized by rhodanese (TST). Both the cytoplasmic and mitochondrial forms are able to bind to the helix IV-loop D in the gamma domain of the 5S rRNA.::Bos taurus (taxid: 9913) confident COG0256::RplR Ribosomal protein L18 [Translation, ribosomal structure and biogenesis] 99.95::27-119 PF00861::Ribosomal_L18p 99.93::29-118 GO:0008097::5S rRNA binding confident hh_1vq8_N_1::47-49,53-85,87-119 very confident psy5756 360 Q58DW5::60S ribosomal protein L5 ::Required for rRNA maturation and formation of the 60S ribosomal subunits (By similarity). This protein binds 5S RNA.::Bos taurus (taxid: 9913) very confident COG0256::RplR Ribosomal protein L18 [Translation, ribosomal structure and biogenesis] 100.00::58-217 PF00861::Ribosomal_L18p 99.96::70-217 GO:0022625::cytosolic large ribosomal subunit very confident hh_2zkr_n_1::45-289 very confident psy12967 222 P28706::DNA repair protein rad13 ::Single-stranded DNA endonuclease involved in excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents. Essential for the incision step of excision-repair.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 99.40::72-222 PF00752::XPG_N 99.95::56-150 GO:0000738::DNA catabolic process, exonucleolytic confident hh_2izo_A_1::63-176,178-186,196-221 very confident psy14294 314 Q7K734::Flap endonuclease 1 ::Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.::Plasmodium falciparum (isolate 3D7) (taxid: 36329) portable COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 99.67::145-313 PF00752::XPG_N 99.87::125-220 GO:0003677::DNA binding confident hh_1b43_A_1::125-127,129-144,146-173,176-313 very confident psy1209 61 C3ZBT0::Flap endonuclease 1 ::Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.::Branchiostoma floridae (taxid: 7739) confident COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 96.81::20-58 PF00752::XPG_N 99.47::1-40 GO:0005634::nucleus confident hh_3q8k_A_1::2-59 very confident psy1207 113 C3ZBT0::Flap endonuclease 1 ::Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.::Branchiostoma floridae (taxid: 7739) confident COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 98.69::8-100 PF00867::XPG_I 99.88::38-102 GO:0005634::nucleus confident hh_3q8k_A_1::3-46,62-103 very confident psy1206 531 C3ZBT0::Flap endonuclease 1 ::Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.::Branchiostoma floridae (taxid: 7739) portable COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 99.91::7-196 PF00867::XPG_I 99.89::52-139 GO:0005634::nucleus confident bp_3q8k_A_1::61-202 very confident psy14291 538 P28706::DNA repair protein rad13 ::Single-stranded DNA endonuclease involved in excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents. Essential for the incision step of excision-repair.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 99.97::124-520 PF00867::XPG_I 99.85::328-412 GO:0005634::nucleus confident hh_3qe9_Y_1::110-154,168-168,172-180,201-207,211-221,235-266,282-286,295-303,311-379,381-435,441-450 very confident psy11827 336 Q54ED2::Exonuclease 1 ::5'->3' double-stranded DNA exonuclease which may also possess a cryptic 3'->5' double-stranded DNA exonuclease activity. Functions in DNA mismatch repair (MMR) to excise mismatch-containing DNA tracts directed by strand breaks located either 5' or 3' to the mismatch. Also exhibits endonuclease activity against 5'-overhanging flap structures similar to those generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.::Dictyostelium discoideum (taxid: 44689) portable COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 99.93::12-233 PF00867::XPG_I 99.93::79-167 GO:0016893::endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters confident hh_3qe9_Y_1::1-143,147-204,207-256,259-262,264-297 very confident psy14489 284 Q49406::5'-3' exonuclease ::5'-3' exonuclease acting preferentially on double-stranded DNA.::Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) (taxid: 243273) confident COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 100.00::4-283 PF02739::5_3_exonuc_N 100.00::3-164 GO:0044464::cell part confident hh_1bgx_T_1::2-50,52-123,125-249,254-255,258-283 very confident psy1208 98 C3ZBT0::Flap endonuclease 1 ::Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a genome stabilization factor that prevents flaps from equilibrating into structurs that lead to duplications and deletions. Also possesses 5'-3' exonuclease activity on nicked or gapped double-stranded DNA, and exhibits RNase H activity. Also involved in replication and repair of rDNA and in repairing mitochondrial DNA.::Branchiostoma floridae (taxid: 7739) confident COG0258::Exo 5'-3' exonuclease (including N-terminal domain of PolI) [DNA replication, recombination, and repair] 95.37::2-61 no hit no match GO:0005634::nucleus confident hh_1b43_A_1::3-61 very confident psy2497 331 Q5E9K3::Pyridoxine-5'-phosphate oxidase ::Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).::Bos taurus (taxid: 9913) confident COG0259::PdxH Pyridoxamine-phosphate oxidase [Coenzyme metabolism] 100.00::8-234 PF12766::Pyridox_oxase_2 99.79::35-124 GO:0004733::pyridoxamine-phosphate oxidase activity confident hh_1nrg_A_1::6-45,47-173,175-234 very confident psy14695 241 A4JHA1::Pyridoxine/pyridoxamine 5'-phosphate oxidase ::Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).::Burkholderia vietnamiensis (strain G4 / LMG 22486) (taxid: 269482) confident COG0259::PdxH Pyridoxamine-phosphate oxidase [Coenzyme metabolism] 100.00::4-241 PF12766::Pyridox_oxase_2 99.80::45-141 GO:0005758::mitochondrial intermembrane space confident hh_1ci0_A_1::32-57,61-120,127-189,191-229,232-241 very confident psy3774 963 A4G7P5::Probable cytosol aminopeptidase ::Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides.::Herminiimonas arsenicoxydans (taxid: 204773) confident COG0260::PepB Leucyl aminopeptidase [Amino acid transport and metabolism] 100.00::475-957 PF00883::Peptidase_M17 100.00::643-951 GO:0005829::cytosol confident hh_1gyt_A_1::458-463,468-539,541-856,861-959 very confident psy6043 282 Q27245::Putative aminopeptidase W07G4.4 ::::Caenorhabditis elegans (taxid: 6239) portable COG0260::PepB Leucyl aminopeptidase [Amino acid transport and metabolism] 100.00::1-280 PF00883::Peptidase_M17 100.00::1-280 GO:0008240::tripeptidyl-peptidase activity confident hh_4efd_A_1::1-18,20-46,51-64,66-175,178-210,215-237,239-259,263-280 very confident psy1579 258 Q920D2::Dihydrofolate reductase ::Key enzyme in folate metabolism. Contributes to the de novo mitochondrial thymidylate biosynthesis pathway. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. Binds its own mRNA and that of DHFRL1.::Rattus norvegicus (taxid: 10116) confident COG0262::FolA Dihydrofolate reductase [Coenzyme metabolism] 100.00::2-219 PF00186::DHFR_1 100.00::2-219 GO:0003729::mRNA binding confident hh_3ia4_A_1::2-36,44-57,61-77,82-101,108-121,160-162,165-202,205-220 very confident psy11676 131 P54889::Probable delta-1-pyrroline-5-carboxylate synthase ::::Caenorhabditis elegans (taxid: 6239) confident COG0263::ProB Glutamate 5-kinase [Amino acid transport and metabolism] 99.97::25-128 PF00696::AA_kinase 98.00::29-81 GO:0005739::mitochondrion confident hh_2j5v_A_1::26-44,46-128 very confident psy17364 312 A8GM33::Elongation factor Ts ::Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome.::Rickettsia akari (strain Hartford) (taxid: 293614) confident COG0264::Tsf Translation elongation factor Ts [Translation, ribosomal structure and biogenesis] 100.00::20-308 PF00889::EF_TS 100.00::79-296 GO:0005634::nucleus confident rp_1xb2_B_1::23-213,217-254,257-303 very confident psy9257 530 Q9JI92::Syntenin-1 ::Seems to function as an adapter protein. In adherens junctions may function to couple syndecans to cytoskeletal proteins or signaling components. Seems to couple transcription factor SOX4 to the IL-5 receptor (IL5RA). May also play a role in vesicular trafficking. Seems to be required for the targeting of TGFA to the cell surface in the early secretory pathway.::Rattus norvegicus (taxid: 10116) portable COG0265::DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] 99.19::291-439 PF13180::PDZ_2 99.31::358-437 GO:0005515::protein binding confident hh_1w9e_A_1::346-507 very confident psy18070 169 Q297U2::Serine protease HTRA2, mitochondrial ::Serine protease that shows proteolytic activity against a non-specific substrate beta-casein. Promotes or induces cell death either by direct binding to and inhibition of BIRC proteins (also called inhibitor of apoptosis proteins, IAPs), leading to an increase in caspase activity, or by a BIRC inhibition-independent, caspase-independent and serine protease activity-dependent mechanism. Can antagonize antiapoptotic activity of th by directly inducing the degradation of th.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0265::DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] 99.90::1-156 PF13180::PDZ_2 99.20::65-162 GO:0030512::negative regulation of transforming growth factor beta receptor signaling pathway confident bp_1lcy_A_1::4-89,91-108,115-132 very confident psy18066 375 Q9JIY5::Serine protease HTRA2, mitochondrial ::Serine protease that shows proteolytic activity against a non-specific substrate beta-casein. Promotes or induces cell death either by direct binding to and inhibition of BIRC proteins (also called inhibitor of apoptosis proteins, IAPs), leading to an increase in caspase activity, or by a BIRC inhibition-independent, caspase-independent and serine protease activity-dependent mechanism. Cleaves THAP5 and promotes its degradation during apoptosis.::Mus musculus (taxid: 10090) confident COG0265::DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] 100.00::73-374 PF13365::Trypsin_2 99.73::103-242 GO:0005758::mitochondrial intermembrane space confident hh_1lcy_A_1::67-124,127-304,306-374 very confident psy2771 174 Q9JIY5::Serine protease HTRA2, mitochondrial ::Serine protease that shows proteolytic activity against a non-specific substrate beta-casein. Promotes or induces cell death either by direct binding to and inhibition of BIRC proteins (also called inhibitor of apoptosis proteins, IAPs), leading to an increase in caspase activity, or by a BIRC inhibition-independent, caspase-independent and serine protease activity-dependent mechanism. Cleaves THAP5 and promotes its degradation during apoptosis.::Mus musculus (taxid: 10090) confident COG0265::DegQ Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] 99.92::4-166 PF13365::Trypsin_2 99.11::11-124 GO:0006508::proteolysis confident hh_1lcy_A_1::10-13,15-166 very confident psy16462 1522 Q24K09::DNA (cytosine-5)-methyltransferase 1 ::Methylates CpG residues. Preferentially methylates hemimethylated DNA. Associates with DNA replication sites in S phase maintaining the methylation pattern in the newly synthesized strand, that is essential for epigenetic inheritance. Associates with chromatin during G2 and M phases to maintain DNA methylation independently of replication. It is responsible for maintaining methylation patterns established in development. DNA methylation is coordinated with methylation of histones. Mediates transcriptional repression by direct binding to HDAC2. In association with DNMT3B and via the recruitment of CTCFL/BORIS, involved in activation of BAG1 gene expression by modulating dimethylation of promoter histone H3 at H3K4 and H3K9.::Bos taurus (taxid: 9913) portable COG0270::Dcm Site-specific DNA methylase [DNA replication, recombination, and repair] 100.00::885-1427 PF00145::DNA_methylase 100.00::887-1152 GO:0003676::nucleic acid binding confident hh_3av4_A_1::4-26,28-222,224-254,258-259,261-265,267-362,364-364,369-442,444-446,448-781,784-794,886-1025,1105-1233,1235-1308,1311-1436 very confident psy13720 487 Q24K09::DNA (cytosine-5)-methyltransferase 1 ::Methylates CpG residues. Preferentially methylates hemimethylated DNA. Associates with DNA replication sites in S phase maintaining the methylation pattern in the newly synthesized strand, that is essential for epigenetic inheritance. Associates with chromatin during G2 and M phases to maintain DNA methylation independently of replication. It is responsible for maintaining methylation patterns established in development. DNA methylation is coordinated with methylation of histones. Mediates transcriptional repression by direct binding to HDAC2. In association with DNMT3B and via the recruitment of CTCFL/BORIS, involved in activation of BAG1 gene expression by modulating dimethylation of promoter histone H3 at H3K4 and H3K9.::Bos taurus (taxid: 9913) confident COG0270::Dcm Site-specific DNA methylase [DNA replication, recombination, and repair] 100.00::216-400 PF00145::DNA_methylase 100.00::218-404 GO:0051573::negative regulation of histone H3-K9 methylation confident hh_3av4_A_1::1-214,216-484 very confident psy3043 731 Q5NVS8::Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase ::Adds the first glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Man(9)GlcNAc(2)-PP-Dol.::Pongo abelii (taxid: 9601) confident COG0271::BolA Stress-induced morphogen (activity unknown) [Signal transduction mechanisms] 99.83::591-682 PF03155::Alg6_Alg8 100.00::26-479 GO:0005794::Golgi apparatus confident hh_1v60_A_1::562-579,584-601,603-607,615-627,631-684 very confident psy11422 687 A4G4R4::DNA ligase ::DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.::Herminiimonas arsenicoxydans (taxid: 204773) very confident COG0272::Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] 100.00::10-679 PF01653::DNA_ligase_aden 100.00::13-328 GO:0005829::cytosol confident hh_2owo_A_1::13-244,246-441,443-679 very confident psy11421 687 A4G4R4::DNA ligase ::DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.::Herminiimonas arsenicoxydans (taxid: 204773) very confident COG0272::Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] 100.00::10-679 PF01653::DNA_ligase_aden 100.00::13-328 GO:0005829::cytosol confident hh_3uq8_A_1::14-333 very confident psy11423 655 Q1LNG5::DNA ligase ::DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.::Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) (taxid: 266264) confident COG0272::Lig NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair] 100.00::10-647 PF01653::DNA_ligase_aden 100.00::13-328 GO:0005829::cytosol confident hh_3uq8_A_1::14-333 very confident psy965 214 B8F671::Deoxyribose-phosphate aldolase ::Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.::Haemophilus parasuis serovar 5 (strain SH0165) (taxid: 557723) confident COG0274::DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism] 100.00::47-213 PF01791::DeoC 100.00::49-212 GO:0004139::deoxyribose-phosphate aldolase activity confident hh_3ngj_A_1::48-79,86-102,105-113,115-172,174-185,187-213 very confident psy10250 387 Q9Y315::Putative deoxyribose-phosphate aldolase ::Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.::Homo sapiens (taxid: 9606) confident COG0274::DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism] 100.00::128-383 PF01791::DeoC 100.00::130-381 GO:0004139::deoxyribose-phosphate aldolase activity confident hh_1mzh_A_1::129-156,173-194,201-207,209-265,267-279,281-314,322-352,358-361,369-382 very confident psy2376 896 B1XC59::Ribosomal RNA small subunit methyltransferase H ::Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.::Escherichia coli (strain K12 / DH10B) (taxid: 316385) confident COG0275::Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] 100.00::390-667 PF01795::Methyltransf_5 100.00::390-667 GO:0071424::rRNA (cytosine-N4-)-methyltransferase activity confident hh_1nmo_A_1::665-730,732-782,785-791,800-894 very confident psy2380 733 B1XC59::Ribosomal RNA small subunit methyltransferase H ::Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.::Escherichia coli (strain K12 / DH10B) (taxid: 316385) confident COG0275::Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane] 100.00::225-506 PF01795::Methyltransf_5 100.00::225-506 GO:0071424::rRNA (cytosine-N4-)-methyltransferase activity confident hh_1nmo_A_1::508-567,569-619,622-628,637-732 very confident psy5712 386 P22315::Ferrochelatase, mitochondrial ::Catalyzes the ferrous insertion into protoporphyrin IX.::Mus musculus (taxid: 10090) confident COG0276::HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] 100.00::32-311 PF00762::Ferrochelatase 100.00::34-310 GO:0005875::microtubule associated complex confident hh_2h1v_A_1::32-63,67-70,72-72,76-107,109-201,203-259,261-269,271-277,292-311 very confident psy45 69 Q9V9S8::Ferrochelatase, mitochondrial ::Catalyzes the ferrous insertion into protoporphyrin IX.::Drosophila melanogaster (taxid: 7227) confident COG0276::HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] 98.69::2-36 PF00762::Ferrochelatase 98.80::2-35 GO:0005875::microtubule associated complex confident hh_3hcn_A_1::2-69 very confident psy15564 1041 Q5ZLT0::Exportin-7 ::Mediates the nuclear export of proteins (cargos) with broad substrate specificity.::Gallus gallus (taxid: 9031) confident COG0276::HemH Protoheme ferro-lyase (ferrochelatase) [Coenzyme metabolism] 100.00::31-323 PF00762::Ferrochelatase 100.00::34-322 GO:0050896::response to stimulus confident rp_3hcn_A_1::74-187,202-290 very confident psy6765 246 O23240::D-2-hydroxyglutarate dehydrogenase, mitochondrial ::Catalyzes the oxidation of D-2-hydroxyglutarate to alpha-ketoglutarate. May be involved in the catabolism of propionyl-CoA derived from beta-oxidation.::Arabidopsis thaliana (taxid: 3702) portable COG0277::GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] 99.87::33-175 PF01565::FAD_binding_4 99.82::66-174 GO:0016614::oxidoreductase activity, acting on CH-OH group of donors confident hh_3pm9_A_1::23-38,41-170 very confident psy4131 241 Q9V778::Alkyldihydroxyacetonephosphate synthase ::::Drosophila melanogaster (taxid: 7227) confident COG0277::GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] 100.00::53-241 PF01565::FAD_binding_4 99.93::99-220 GO:0044444::cytoplasmic part confident hh_4bby_A_1::43-105,111-241 very confident psy4717 90 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG0277::GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] 99.34::25-89 PF01565::FAD_binding_4 99.41::30-89 GO:0071949::FAD binding confident hh_4bby_A_1::3-12,14-89 very confident psy4699 500 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG0277::GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] 99.95::69-404 PF02913::FAD-oxidase_C 99.95::131-402 GO:0005778::peroxisomal membrane confident hh_4bby_A_1::69-403 very confident psy3496 223 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG0277::GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] 98.82::25-105 PF02913::FAD-oxidase_C 98.72::65-204 GO:0071949::FAD binding confident hh_4bby_A_1::40-127,157-222 very confident psy4129 355 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG0277::GlcD FAD/FMN-containing dehydrogenases [Energy production and conversion] 99.63::6-308 PF02913::FAD-oxidase_C 100.00::3-305 GO:0071949::FAD binding confident hh_2uuu_A_1::4-152,154-179,236-306 very confident psy1118 3374 P55142::Glutaredoxin-C6 ::Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins. Possesses thioltransferase, dehydroascorbate reductase and GSH-dependent peroxidase activities in vitro.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0278::Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones] 100.00::423-521 PF00462::Glutaredoxin 99.22::3044-3107 GO:0005829::cytosol confident hh_3c1r_A_1::3245-3291,3293-3345 very confident psy221 205 Q851Y7::Monothiol glutaredoxin-S7, chloroplastic ::May only reduce GSH-thiol disulfides, but not protein disulfides.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0278::Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones] 99.93::29-130 PF00462::Glutaredoxin 99.70::44-108 GO:0009570::chloroplast stroma confident hh_3gx8_A_1::28-133 very confident psy15946 251 Q9VNL4::Glutaredoxin domain-containing cysteine-rich protein CG31559 ::::Drosophila melanogaster (taxid: 7227) confident COG0278::Glutaredoxin-related protein [Posttranslational modification, protein turnover, chaperones] 99.76::98-193 PF04908::SH3BGR 99.61::104-191 GO:0044464::cell part confident hh_2khp_A_1::101-111,118-155,158-191 very confident psy1675 179 Q29558::NADP-dependent malic enzyme (Fragment) ::::Sus scrofa (taxid: 9823) confident COG0281::SfcA Malic enzyme [Energy production and conversion] 99.40::23-157 PF00390::malic 100.00::11-125 GO:0005829::cytosol confident hh_1gq2_A_1::11-160 very confident psy14495 766 P43837::NADP-dependent malic enzyme ::::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) very confident COG0281::SfcA Malic enzyme [Energy production and conversion] 100.00::10-437 PF01515::PTA_PTB 100.00::436-760 GO:0055114::oxidation-reduction process confident hh_2dvm_A_1::13-235,238-307,309-364,381-422,424-443 very confident psy14377 848 A8FZ49::NAD-dependent malic enzyme ::::Shewanella sediminis (strain HAW-EB3) (taxid: 425104) confident COG0281::SfcA Malic enzyme [Energy production and conversion] 100.00::502-787 PF03949::Malic_M 100.00::215-553 GO:0006108::malate metabolic process confident bp_1gq2_A_1::507-718 very confident psy15432 1255 Q05932::Folylpolyglutamate synthase, mitochondrial ::Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Unsubstitued reduced folates are the preferred substrates. Metabolizes methotrexate (MTX) to polyglutamates.::Homo sapiens (taxid: 9606) portable COG0285::FolC Folylpolyglutamate synthase [Coenzyme metabolism] 100.00::52-652 PF08245::Mur_ligase_M 99.86::113-325 GO:0005829::cytosol confident hh_1w78_A_2::664-678,689-691,697-714,718-787,794-836,838-880,883-885,887-922,924-940,1012-1039,1041-1064,1077-1100,1102-1103,1105-1123,1126-1132,1135-1167 very confident psy1839 304 Q8W035::Folylpolyglutamate synthase ::Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis. Essential for organellar and whole-plant folate homeostasis.::Arabidopsis thaliana (taxid: 3702) confident COG0285::FolC Folylpolyglutamate synthase [Coenzyme metabolism] 100.00::2-296 PF08245::Mur_ligase_M 99.38::59-161 GO:0005829::cytosol confident hh_2vos_A_1::2-90,92-133,135-230,232-272,274-296 very confident psy9580 71 Q2YBS4::50S ribosomal protein L35 ::::Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) (taxid: 323848) very confident COG0291::RpmI Ribosomal protein L35 [Translation, ribosomal structure and biogenesis] 99.97::7-71 PF01632::Ribosomal_L35p 99.93::8-68 GO:0022625::cytosolic large ribosomal subunit very confident hh_3r8s_3_1::8-71 very confident psy9578 122 Q8XZ26::50S ribosomal protein L20 ::Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.::Ralstonia solanacearum (strain GMI1000) (taxid: 267608) very confident COG0292::RplT Ribosomal protein L20 [Translation, ribosomal structure and biogenesis] 100.00::1-118 PF00453::Ribosomal_L20 100.00::2-109 GO:0000900::translation repressor activity, nucleic acid binding very confident hh_2ghj_A_1::2-5,7-118 very confident psy1489 229 Q9VDT6::Putative ribosomal RNA methyltransferase CG11447 ::Probable methyltransferase.::Drosophila melanogaster (taxid: 7227) very confident COG0293::FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] 100.00::18-229 PF01728::FtsJ 100.00::41-226 GO:0005739::mitochondrion confident hh_3dou_A_1::38-82,84-84,95-114,116-228 very confident psy11646 433 Q9UET6::Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase ::::Homo sapiens (taxid: 9606) confident COG0293::FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] 99.96::124-295 PF01728::FtsJ 99.91::200-291 GO:0005829::cytosol confident hh_3ccf_A_1::24-53,57-57,59-59,61-80,83-97,102-144 very confident psy3133 547 A0B8A1::Ribosomal RNA large subunit methyltransferase E ::Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.::Methanosaeta thermophila (strain DSM 6194 / PT) (taxid: 349307) portable COG0293::FtsJ 23S rRNA methylase [Translation, ribosomal structure and biogenesis] 99.97::1-114 PF11861::DUF3381 99.96::141-357 GO:0043231::intracellular membrane-bounded organelle confident hh_3dou_A_1::1-19,21-114 very confident psy2494 166 P56389::Cytidine deaminase ::This enzyme scavenge exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.::Mus musculus (taxid: 10090) confident COG0295::Cdd Cytidine deaminase [Nucleotide transport and metabolism] 100.00::17-155 PF08211::dCMP_cyt_deam_2 99.84::16-90 GO:0005829::cytosol confident hh_2d30_A_1::16-90,94-114,117-129,131-143,149-155 very confident psy14038 131 Q96VA4::1,4-alpha-glucan-branching enzyme ::::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) confident COG0296::GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] 100.00::7-131 PF00128::Alpha-amylase 99.30::83-131 GO:0009570::chloroplast stroma confident hh_3aml_A_1::6-131 very confident psy9004 237 Q6EAS5::1,4-alpha-glucan-branching enzyme ::Required for sufficient glycogen accumulation. The alpha 1-6 branches of glycogen play an important role in increasing the solubility of the molecule and, consequently, in reducing the osmotic pressure within cells.::Equus caballus (taxid: 9796) confident COG0296::GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] 100.00::3-219 PF00128::Alpha-amylase 100.00::3-200 GO:0030246::carbohydrate binding confident rp_3aml_A_1::44-217 very confident psy9007 132 Q96VA4::1,4-alpha-glucan-branching enzyme ::::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) portable COG0296::GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] 98.81::65-132 PF02922::CBM_48 98.90::82-131 GO:0009536::plastid confident hh_3aml_A_1::12-107 very confident psy9005 99 Q96VA4::1,4-alpha-glucan-branching enzyme ::::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) portable COG0296::GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] 99.04::4-91 no hit no match GO:0005737::cytoplasm confident hh_3aml_A_1::4-93 very confident psy12587 390 Q9DBE8::Alpha-1,3/1,6-mannosyltransferase ALG2 ::Mannosylates Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate.::Mus musculus (taxid: 10090) confident COG0297::GlgA Glycogen synthase [Carbohydrate transport and metabolism] 99.96::76-388 PF00534::Glycos_transf_1 99.95::190-363 GO:0046982::protein heterodimerization activity confident hh_3c48_A_1::2-49,51-53,55-155,157-187,190-225,229-242,251-350,352-366,368-388 very confident psy4649 755 P13834::Glycogen [starch] synthase, muscle ::Transfers the glycosyl residue from UDP-Glc to the non-reducing end of alpha-1,4-glucan.::Oryctolagus cuniculus (taxid: 9986) very confident COG0297::GlgA Glycogen synthase [Carbohydrate transport and metabolism] 100.00::16-607 PF05693::Glycogen_syn 100.00::19-719 GO:0005829::cytosol confident hh_3nb0_A_1::7-69,71-156,158-160,164-392,396-592,637-664,670-679,681-705 very confident psy8013 252 Q64323::N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein ::Necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, the very early intermediate in GPI-anchor biosynthesis.::Mus musculus (taxid: 10090) confident COG0297::GlgA Glycogen synthase [Carbohydrate transport and metabolism] 99.45::2-185 PF13439::Glyco_transf_4 99.94::1-180 GO:0006506::GPI anchor biosynthetic process confident hh_2iuy_A_1::6-42,48-57,73-99,105-112,114-125,141-158,164-184 very confident psy14908 61 Q05A13::Short-chain dehydrogenase/reductase family 16C member 6 ::::Mus musculus (taxid: 10090) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.74::1-61 PF00106::adh_short 99.55::1-61 GO:0005811::lipid particle confident hh_3f1l_A_1::1-59 very confident psy6114 66 Q6P5L8::Hydroxysteroid dehydrogenase-like protein 2 ::Has apparently no steroid dehydrogenase activity.::Danio rerio (taxid: 7955) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.35::5-49 PF00106::adh_short 98.71::10-42 GO:0005829::cytosol confident hh_3kvo_A_1::3-63 very confident psy13141 84 Q08651::Probable oxidoreductase ENV9 ::Probable dehydrogenase required for replication of Brome mosaic virus. Involved in vacuolar processing and morphology.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.73::1-83 PF00106::adh_short 99.55::2-83 GO:0006629::lipid metabolic process confident hh_3rd5_A_1::2-16,22-45,50-83 very confident psy10632 273 Q09517::Very-long-chain 3-oxooacyl-coA reductase let-767 ::May be required for synthesis of a sterol hormone.::Caenorhabditis elegans (taxid: 6239) portable COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 100.00::112-272 PF00106::adh_short 99.95::115-272 GO:0044281::small molecule metabolic process confident hh_4fgs_A_1::112-158,163-204,207-241,244-272 very confident psy2040 159 Q8N3Y7::Epidermal retinol dehydrogenase 2 ::Oxidoreductase with strong preference for NAD. Active in both the oxidative and reductive directions. Oxidizes all-trans-retinol in all-trans-retinaldehyde. No activity was detected with 11-cis-retinol or 11-cis-retinaldehyde as substrates with either NAD(+)/NADH or NADP(+)/NADPH.::Homo sapiens (taxid: 9606) portable COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.30::97-159 PF00106::adh_short 98.78::102-159 GO:0044444::cytoplasmic part confident hh_3n74_A_1::96-145,149-151,153-159 very confident psy7029 125 P42317::Uncharacterized oxidoreductase YxjF ::::Bacillus subtilis (strain 168) (taxid: 224308) portable COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.88::2-124 PF00106::adh_short 99.75::3-124 GO:0044710::single-organism metabolic process confident hh_3ucx_A_1::2-40,68-76,79-119 very confident psy9143 100 Q9VXJ0::Peroxisomal multifunctional enzyme type 2 ::Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids.::Drosophila melanogaster (taxid: 7227) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.87::6-100 PF00106::adh_short 99.70::10-100 GO:0051704::multi-organism process confident hh_1gz6_A_1::1-100 very confident psy5437 250 O70503::Estradiol 17-beta-dehydrogenase 12 ::Catalyzes the transformation of estrone (E1) into estradiol (E2), suggesting a central role in estrogen formation. Its strong expression in ovary and mammary gland suggest that it may constitute the major enzyme responsible for the conversion of E1 to E2 in females. Also has 3-ketoacyl-CoA reductase activity, reducing both long chain 3-ketoacyl-CoAs and long chain fatty acyl-CoAs, suggesting a role in long fatty acid elongation.::Mus musculus (taxid: 10090) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 100.00::1-234 PF13561::adh_short_C2 100.00::3-231 GO:0005783::endoplasmic reticulum confident hh_3pgx_A_1::1-34,42-63,65-105,108-114,117-231 very confident psy11191 81 P36086::Uncharacterized oxidoreductase YKL071W ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.47::2-66 PF13561::adh_short_C2 99.72::2-77 GO:0005829::cytosol confident hh_1sny_A_1::2-81 very confident psy3252 475 Q06136::3-ketodihydrosphingosine reductase ::Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).::Homo sapiens (taxid: 9606) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 100.00::95-436 PF13561::adh_short_C2 100.00::105-377 GO:0006629::lipid metabolic process confident hh_3pgx_A_1::92-146,171-181,183-227,249-348,350-361,364-376 very confident psy4251 292 Q91WL8::WW domain-containing oxidoreductase ::Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.::Mus musculus (taxid: 10090) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 100.00::22-271 PF13561::adh_short_C2 99.96::39-283 GO:0006917::induction of apoptosis confident hh_3rd5_A_1::20-29,31-35,42-48,52-77,83-106,111-157,164-180,186-191,193-246,248-256,259-284 very confident psy7936 222 Q8BYK4::Retinol dehydrogenase 12 ::Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.::Mus musculus (taxid: 10090) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 99.97::11-195 PF13561::adh_short_C2 99.95::21-202 GO:0042572::retinol metabolic process confident hh_3lf2_A_1::8-62,71-168,171-185,187-203 very confident psy2854 384 Q9ERI6::Retinol dehydrogenase 14 ::Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. No steroid dehydrogenase activity detected.::Mus musculus (taxid: 10090) portable COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 100.00::52-257 PF13561::adh_short_C2 100.00::63-292 GO:0045335::phagocytic vesicle confident hh_1ja9_A_1::52-103,106-197,214-257 very confident psy10631 424 Q8BTX9::Inactive hydroxysteroid dehydrogenase-like protein 1 ::::Mus musculus (taxid: 10090) confident COG0300::DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] 100.00::82-331 PF13561::adh_short_C2 99.98::86-297 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_3pgx_A_1::80-126,128-169,172-297 very confident psy417 240 Q05915::GTP cyclohydrolase 1 ::May positively regulate nitric oxide synthesis in endothelial cells. May be involved in dopamine synthesis. May modify pain sensitivity and persistence.::Mus musculus (taxid: 10090) very confident COG0302::FolE GTP cyclohydrolase I [Coenzyme metabolism] 100.00::57-240 PF01227::GTP_cyclohydroI 100.00::60-238 GO:0005509::calcium ion binding very confident hh_1is8_A_1::54-238 very confident psy8242 248 Q39054::Molybdopterin biosynthesis protein CNX1 ::Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.::Arabidopsis thaliana (taxid: 3702) portable COG0303::MoeA Molybdopterin biosynthesis enzyme [Coenzyme metabolism] 100.00::1-245 PF00994::MoCF_biosynth 99.94::41-156 GO:0005622::intracellular confident hh_2fts_A_1::1-54,56-180,182-228,231-247 very confident psy8230 251 Q39054::Molybdopterin biosynthesis protein CNX1 ::Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.::Arabidopsis thaliana (taxid: 3702) portable COG0303::MoeA Molybdopterin biosynthesis enzyme [Coenzyme metabolism] 100.00::1-250 PF03453::MoeA_N 100.00::1-207 GO:0005737::cytoplasm confident no hit no match psy5222 415 P57193::3-oxoacyl-[acyl-carrier-protein] synthase 1 ::Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.::Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (taxid: 107806) confident COG0304::FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-415 PF00109::ketoacyl-synt 100.00::1-253 GO:0005829::cytosol confident hh_3o04_A_1::1-34,39-46,55-64,66-98,101-217,221-376,378-415 very confident psy11966 99 Q71SP7::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Bos taurus (taxid: 9913) confident COG0304::FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.91::1-99 PF00109::ketoacyl-synt 99.92::6-99 GO:0005829::cytosol confident hh_2vz8_A_1::1-99 very confident psy5298 109 Q83E37::3-oxoacyl-[acyl-carrier-protein] synthase 2 ::Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.::Coxiella burnetii (strain RSA 493 / Nine Mile phase I) (taxid: 227377) portable COG0304::FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.87::1-109 PF00109::ketoacyl-synt 99.90::1-109 GO:0044444::cytoplasmic part confident hh_1tqy_B_1::2-91,93-108 very confident psy5293 359 Q9D404::3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial ::May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function.::Mus musculus (taxid: 10090) confident COG0304::FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::3-358 PF02801::Ketoacyl-synt_C 99.85::212-312 GO:0005829::cytosol confident hh_3o04_A_1::5-6,8-22,24-91,94-143,207-331,335-358 very confident psy2892 452 Q8FB22::Replicative DNA helicase ::Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with dnaC protein, primase, and other prepriming proteins.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) very confident COG0305::DnaB Replicative DNA helicase [DNA replication, recombination, and repair] 100.00::13-452 PF03796::DnaB_C 100.00::196-452 GO:0006268::DNA unwinding involved in replication very confident hh_2r6a_A_1::13-137,139-160,163-188,192-324,326-452 very confident psy2891 452 Q8FB22::Replicative DNA helicase ::Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with dnaC protein, primase, and other prepriming proteins.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) very confident COG0305::DnaB Replicative DNA helicase [DNA replication, recombination, and repair] 100.00::13-452 PF03796::DnaB_C 100.00::196-452 GO:0006268::DNA unwinding involved in replication very confident hh_2r6a_A_1::13-137,139-160,163-188,192-324,326-452 very confident psy4520 291 Q8CIW5::Twinkle protein, mitochondrial ::Involved in mitochondrial DNA (mtDNA) metabolism. Could function as an adenine nucleotide-dependent DNA helicase. Function infered to be critical for lifetime maintenance of mtDNA integrity. May be a key regulator of mtDNA copy number in mammals.::Mus musculus (taxid: 10090) portable COG0305::DnaB Replicative DNA helicase [DNA replication, recombination, and repair] 100.00::3-250 PF03796::DnaB_C 100.00::2-251 GO:0051260::protein homooligomerization confident hh_1q57_A_1::2-50,86-92,95-142,144-224,229-229,231-252 very confident psy4641 229 Q9Z820::Riboflavin synthase ::Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2-butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The alpha subunit catalyzes the dismutation of 6,7-dimethyl-8-lumazine to riboflavin and 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione.::Chlamydia pneumoniae (taxid: 83558) confident COG0307::RibC Riboflavin synthase alpha chain [Coenzyme metabolism] 100.00::1-206 PF00677::Lum_binding 99.96::3-87 GO:0004746::riboflavin synthase activity confident hh_1i8d_A_1::1-126,128-186,191-200 very confident psy6925 131 Q11011::Puromycin-sensitive aminopeptidase ::Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins.::Mus musculus (taxid: 10090) confident COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 100.00::1-131 PF01433::Peptidase_M1 100.00::1-131 GO:0005829::cytosol confident hh_3se6_A_1::1-131 very confident psy3708 240 Q8SRG3::Probable M1 family aminopeptidase 2 ::::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 100.00::1-199 PF01433::Peptidase_M1 100.00::1-216 GO:0005829::cytosol confident no hit no match psy1463 947 P15144::Aminopeptidase N ::Broad specificity aminopeptidase. Plays a role in the final digestion of peptides generated from hydrolysis of proteins by gastric and pancreatic proteases. May play a critical role in the pathogenesis of cholesterol gallstone disease. May be involved in the metabolism of regulatory peptides of diverse cell types including small intestinal and tubular epithelial cells, macrophages, granulocytes and synaptic membranes from the CNS. Found to cleave antigen peptides bound to major histocompatibility complex class II molecules of presenting cells and to degrade neurotransmitters at synaptic junctions. Is also implicated as a regulator of IL-8 bioavailability in the endometrium, and therefore may contribute to the regulation of angiogenesis. Is used as a marker for acute myeloid leukemia and plays a role in tumor invasion. In case of human coronavirus 229E (HCoV-229E) infection, serves as receptor for HCoV-229E spike glycoprotein. Mediates as well human cytomegalovirus (HCMV) infection.::Homo sapiens (taxid: 9606) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 100.00::236-816 PF01433::Peptidase_M1 100.00::233-533 GO:0008233::peptidase activity confident hh_3se6_A_2::826-930 very confident psy5250 1102 Q10736::Aminopeptidase N (Fragment) ::Aminopeptidase N is involved in the degradation of intracellular peptides generated by protein breakdown during normal growth as well as in response to nutrient starvation.::Acetobacter pasteurianus (taxid: 438) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 100.00::685-799 PF01433::Peptidase_M1 100.00::3-290 GO:0008270::zinc ion binding confident hh_3se6_A_2::419-459,468-469,473-473,480-488,503-509,520-610,612-613,685-689,696-778,780-799 very confident psy7253 119 Q95334::Glutamyl aminopeptidase ::::Sus scrofa (taxid: 9823) confident COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 99.95::11-118 PF01433::Peptidase_M1 99.97::10-118 GO:0016477::cell migration confident hh_3se6_A_1::9-118 very confident psy13169 129 Q24325::Transcription initiation factor TFIID subunit 2 ::TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. An essential subunit binds to core promoter DNA.::Drosophila melanogaster (taxid: 7227) confident COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 99.81::23-128 PF01433::Peptidase_M1 99.94::7-128 GO:0033276::transcription factor TFTC complex confident hh_3cia_A_1::7-15,20-45,48-102,105-107,110-128 confident psy5111 132 Q8SRG3::Probable M1 family aminopeptidase 2 ::::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 99.83::2-100 PF01433::Peptidase_M1 99.88::1-98 GO:0043233::organelle lumen confident hh_3cia_A_1::47-58,60-65,67-131 very confident psy2264 148 Q978U3::Tricorn protease-interacting factor F2 ::Proteases F1, F2 and F3 degrade oligopeptides produced by Tricorn (themselves probably produced by the proteasome), yielding free amino acids.::Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) (taxid: 273116) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 100.00::1-146 PF01433::Peptidase_M1 100.00::1-146 GO:0043233::organelle lumen confident hh_3se6_A_1::1-9,11-55,57-82,85-146 very confident psy16137 448 Q978U3::Tricorn protease-interacting factor F2 ::Proteases F1, F2 and F3 degrade oligopeptides produced by Tricorn (themselves probably produced by the proteasome), yielding free amino acids.::Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) (taxid: 273116) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 100.00::102-448 PF01433::Peptidase_M1 100.00::101-358 GO:0043233::organelle lumen confident bp_3se6_A_1::187-305,313-436 very confident psy7198 128 Q8SRG3::Probable M1 family aminopeptidase 2 ::::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 99.72::35-126 PF01433::Peptidase_M1 99.93::2-125 GO:0071944::cell periphery confident hh_3se6_A_1::1-126 very confident psy13041 81 Q32LQ0::Glutamyl aminopeptidase ::Appears to have a role in the catabolic pathway of the renin-angiotensin system. Probably plays a role in regulating growth and differentiation of early B-lineage cells.::Bos taurus (taxid: 9913) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 90.41::8-79 PF11838::ERAP1_C 99.58::3-79 GO:0004177::aminopeptidase activity confident hh_3rjo_A_1::3-80 very confident psy14860 711 Q97AJ6::Tricorn protease-interacting factor F3 ::Proteases F1, F2 and F3 degrade oligopeptides produced by Tricorn (themselves probably produced by the proteasome), yielding free amino acids.::Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) (taxid: 273116) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 100.00::17-642 PF11838::ERAP1_C 100.00::378-648 GO:0005576::extracellular region confident hh_3se6_A_2::573-630,635-711 very confident psy13042 127 Q32LQ0::Glutamyl aminopeptidase ::Appears to have a role in the catabolic pathway of the renin-angiotensin system. Probably plays a role in regulating growth and differentiation of early B-lineage cells.::Bos taurus (taxid: 9913) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 95.25::22-108 PF11838::ERAP1_C 99.85::6-108 GO:0008233::peptidase activity confident hh_3se6_A_1::7-16,18-24,27-108 very confident psy5127 128 P15144::Aminopeptidase N ::Broad specificity aminopeptidase. Plays a role in the final digestion of peptides generated from hydrolysis of proteins by gastric and pancreatic proteases. May play a critical role in the pathogenesis of cholesterol gallstone disease. May be involved in the metabolism of regulatory peptides of diverse cell types including small intestinal and tubular epithelial cells, macrophages, granulocytes and synaptic membranes from the CNS. Found to cleave antigen peptides bound to major histocompatibility complex class II molecules of presenting cells and to degrade neurotransmitters at synaptic junctions. Is also implicated as a regulator of IL-8 bioavailability in the endometrium, and therefore may contribute to the regulation of angiogenesis. Is used as a marker for acute myeloid leukemia and plays a role in tumor invasion. In case of human coronavirus 229E (HCoV-229E) infection, serves as receptor for HCoV-229E spike glycoprotein. Mediates as well human cytomegalovirus (HCMV) infection.::Homo sapiens (taxid: 9606) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 96.94::4-115 PF11838::ERAP1_C 99.75::2-106 GO:0043233::organelle lumen confident hh_3rjo_A_1::2-127 very confident psy1464 107 P15144::Aminopeptidase N ::Broad specificity aminopeptidase. Plays a role in the final digestion of peptides generated from hydrolysis of proteins by gastric and pancreatic proteases. May play a critical role in the pathogenesis of cholesterol gallstone disease. May be involved in the metabolism of regulatory peptides of diverse cell types including small intestinal and tubular epithelial cells, macrophages, granulocytes and synaptic membranes from the CNS. Found to cleave antigen peptides bound to major histocompatibility complex class II molecules of presenting cells and to degrade neurotransmitters at synaptic junctions. Is also implicated as a regulator of IL-8 bioavailability in the endometrium, and therefore may contribute to the regulation of angiogenesis. Is used as a marker for acute myeloid leukemia and plays a role in tumor invasion. In case of human coronavirus 229E (HCoV-229E) infection, serves as receptor for HCoV-229E spike glycoprotein. Mediates as well human cytomegalovirus (HCMV) infection.::Homo sapiens (taxid: 9606) portable COG0308::PepN Aminopeptidase N [Amino acid transport and metabolism] 95.95::5-105 PF11838::ERAP1_C 99.87::3-105 GO:0044464::cell part confident rp_3rjo_A_1::20-101 very confident psy4307 412 Q8BH69::Selenide, water dikinase 1 ::Synthesizes selenophosphate from selenide and ATP.::Mus musculus (taxid: 10090) very confident COG0309::HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] 100.00::53-409 PF00586::AIRS 99.83::97-194 GO:0008284::positive regulation of cell proliferation very confident hh_3fd5_A_1::29-78,80-82,85-412 very confident psy9403 737 P45297::Protein TldD homolog ::::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) confident COG0312::TldD Predicted Zn-dependent proteases and their inactivated homologs [General function prediction only] 100.00::278-736 PF00591::Glycos_transf_3 100.00::31-260 GO:0006355::regulation of transcription, DNA-dependent confident hh_1vpb_A_1::277-468,470-474,478-517,519-605,618-664,666-705,720-736 very confident psy11503 172 Q7QAD7::Molybdopterin synthase catalytic subunit ::Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group.::Anopheles gambiae (taxid: 7165) confident COG0314::MoaE Molybdopterin converting factor, large subunit [Coenzyme metabolism] 100.00::28-167 PF02391::MoaE 99.97::50-142 GO:0006777::Mo-molybdopterin cofactor biosynthetic process confident hh_2wp4_A_1::50-94,96-154,159-164 very confident psy7477 237 Q5R788::Iron-sulfur cluster assembly 2 homolog, mitochondrial ::Involved in the assembly of mitochondrial iron-sulfur proteins. Probably involved in the binding of an intermediate of Fe/S cluster assembly.::Pongo abelii (taxid: 9601) confident COG0316::sufA Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones] 100.00::105-210 PF01521::Fe-S_biosyn 99.84::106-206 GO:0005739::mitochondrion confident hh_1r94_A_1::106-192,194-214 very confident psy10002 145 Q80W96::Iron-sulfur cluster assembly 1 homolog, mitochondrial ::Involved in the assembly of mitochondrial iron-sulfur proteins. Probably involved in the binding of an intermediate of Fe/S cluster assembly.::Rattus norvegicus (taxid: 10116) confident COG0316::sufA Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones] 100.00::16-145 PF01521::Fe-S_biosyn 99.88::17-141 GO:0005739::mitochondrion confident hh_2d2a_A_1::15-35,44-81,97-145 very confident psy9412 118 A9AH79::Putative iron--sulfur cluster insertion protein ErpA ::Required for insertion of 4Fe-4S clusters.::Burkholderia multivorans (strain ATCC 17616 / 249) (taxid: 395019) very confident COG0316::sufA Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones] 100.00::8-116 PF01521::Fe-S_biosyn 99.94::9-112 GO:0051537::2 iron, 2 sulfur cluster binding very confident hh_2apn_A_1::7-116 very confident psy9411 118 A9AH79::Putative iron--sulfur cluster insertion protein ErpA ::Required for insertion of 4Fe-4S clusters.::Burkholderia multivorans (strain ATCC 17616 / 249) (taxid: 395019) very confident COG0316::sufA Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones] 100.00::8-116 PF01521::Fe-S_biosyn 99.94::9-112 GO:0051537::2 iron, 2 sulfur cluster binding very confident hh_2apn_A_1::7-116 very confident psy8855 200 Q8SSM2::Iron sulfur cluster assembly protein 1 ::Involved in iron homeostasis within the mitosome where it is involved in the assembly of iron-sulfur proteins. Essential for de novo biosynthesis of mitosomal iron sulfur proteins.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG0316::sufA Fe-S cluster assembly scaffold protein [Posttranslational modification, protein turnover, chaperones] 100.00::96-200 PF01592::NifU_N 99.96::2-103 GO:0005829::cytosol confident hh_3lvl_A_1::2-103 very confident psy8734 264 Q8N4P3::Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 ::ppGpp hydrolyzing enzyme involved in starvation response.::Homo sapiens (taxid: 9606) confident COG0317::SpoT Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription] 100.00::77-262 PF13328::HD_4 99.98::90-239 GO:0046872::metal ion binding confident hh_3nr1_A_1::82-255 very confident psy4969 66 O88813::Long-chain-fatty-acid--CoA ligase 5 ::Acyl-CoA synthetases (ACSL) activates long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. ACSL5 may sensitize epithelial cells to apoptosis specifically triggered by the death ligand TRAIL at the villus tip of the crypt-villus axis of the small intestine (By similarity). May have a role in the survival of glioma cells (By similarity). May activate fatty acids from exogenous sources for the synthesis of triacylglycerol destined for intracellular storage. It was suggested that it may also stimulate fatty acid oxidation. Utilizes a wide range of saturated fatty acids with a preference for C16-C18 unsaturated fatty acids.::Rattus norvegicus (taxid: 10116) confident COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.79::1-66 PF00501::AMP-binding 99.79::1-66 GO:0001676::long-chain fatty acid metabolic process confident hh_3tsy_A_1::1-66 very confident psy12852 1102 Q5RDY4::Long-chain fatty acid transport protein 4 ::Involved in translocation of long-chain fatty acids (LFCA) across the plasma membrane. Appears to be the principal fatty acid transporter in small intestinal enterocytes. Plays a role in the formation of the epidermal barrier. Required for fat absorption in early embryogenesis. Has acyl-CoA ligase activity for long-chain and very-long-chain fatty acids.::Pongo abelii (taxid: 9601) portable COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::482-1008 PF00501::AMP-binding 100.00::492-913 GO:0001676::long-chain fatty acid metabolic process confident hh_3r44_A_1::469-489,492-608,613-627,630-692,694-773,776-806,814-824,826-828,840-843,845-845,850-857,859-875,883-944,946-1007 very confident psy4547 92 O68008::Bacitracin synthase 3 ::Induces peptide synthesis, activates and incorporates five amino acids, forms a thiazoline ring between the first two amino acids and incoporates a D-glutamine in the fourth position.::Bacillus licheniformis (taxid: 1402) confident COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.92::2-92 PF00501::AMP-binding 99.71::1-72 GO:0005829::cytosol confident hh_2vsq_A_1::1-35,40-92 very confident psy5015 94 Q8VCW8::Acyl-CoA synthetase family member 2, mitochondrial ::Acyl-CoA synthases catalyze the initial reaction in fatty acid metabolism, by forming a thioester with CoA. Has some preference toward medium-chain substrates. Plays a role in adipodyte differentiation.::Mus musculus (taxid: 10090) confident COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.94::3-93 PF00501::AMP-binding 99.15::4-34 GO:0005829::cytosol confident hh_3r44_A_1::4-74,76-93 very confident psy8225 479 Q5RDY4::Long-chain fatty acid transport protein 4 ::Involved in translocation of long-chain fatty acids (LFCA) across the plasma membrane. Appears to be the principal fatty acid transporter in small intestinal enterocytes. Plays a role in the formation of the epidermal barrier. Required for fat absorption in early embryogenesis. Has acyl-CoA ligase activity for long-chain and very-long-chain fatty acids.::Pongo abelii (taxid: 9601) confident COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::45-479 PF00501::AMP-binding 100.00::53-479 GO:0006646::phosphatidylethanolamine biosynthetic process confident hh_3r44_A_1::43-170,182-198,202-272,274-344,346-347,349-378,385-394,396-397,408-412,414-420,425-426,428-445,452-479 very confident psy4966 149 B7NHE1::Probable crotonobetaine/carnitine-CoA ligase ::Could catalyze the transfer of CoA to carnitine, generating the initial carnitinyl-CoA needed for the CaiB reaction cycle.::Escherichia coli O7:K1 (strain IAI39 / ExPEC) (taxid: 585057) portable COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.97::1-146 PF00501::AMP-binding 99.77::1-91 GO:0031090::organelle membrane confident hh_3r44_A_1::1-20,22-32,34-42,44-68,70-127,129-147 very confident psy2835 305 Q5ZKR7::Long-chain-fatty-acid--CoA ligase ACSBG2 ::Mediates activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation.::Gallus gallus (taxid: 9031) portable COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::3-292 PF00501::AMP-binding 100.00::5-289 GO:0044444::cytoplasmic part confident hh_4fuq_A_1::3-33,35-107,109-121,124-132,137-153,160-203,205-243,245-253,256-303 very confident psy4550 251 O31782::Polyketide synthase PksN ::Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::9-249 PF00501::AMP-binding 100.00::19-249 GO:0044550::secondary metabolite biosynthetic process confident hh_3rg2_A_1::11-24,27-34,36-230,234-250 very confident psy9665 207 Q54P79::Probable 4-coumarate--CoA ligase 3 ::::Dictyostelium discoideum (taxid: 44689) portable COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-204 PF00501::AMP-binding 99.97::1-195 GO:0044711::single-organism biosynthetic process confident hh_2d1s_A_1::2-19,21-97,100-157,159-195,198-205 very confident psy7295 165 no hit no match COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.97::1-164 PF00501::AMP-binding 99.79::1-79 GO:0047760::butyrate-CoA ligase activity confident no hit no match psy9226 548 B5BL55::Probable crotonobetaine/carnitine-CoA ligase ::Could catalyze the transfer of CoA to carnitine, generating the initial carnitinyl-CoA needed for the CaiB reaction cycle.::Salmonella paratyphi A (strain AKU_12601) (taxid: 554290) confident COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 100.00::15-548 PF00501::AMP-binding 100.00::26-521 GO:0070328::triglyceride homeostasis confident hh_3r44_A_1::9-148,160-174,177-246,248-321,323-324,326-355,362-371,373-374,385-389,391-397,402-403,405-415,477-482,490-548 very confident psy4975 126 B7HTW3::2-succinylbenzoate--CoA ligase ::Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA).::Bacillus cereus (strain AH187) (taxid: 405534) portable COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.93::2-119 PF13193::AMP-binding_C 99.68::29-107 GO:0001676::long-chain fatty acid metabolic process confident hh_3tsy_A_1::2-90,92-94,97-123 very confident psy8157 191 Q5RDY4::Long-chain fatty acid transport protein 4 ::Involved in translocation of long-chain fatty acids (LFCA) across the plasma membrane. Appears to be the principal fatty acid transporter in small intestinal enterocytes. Plays a role in the formation of the epidermal barrier. Required for fat absorption in early embryogenesis. Has acyl-CoA ligase activity for long-chain and very-long-chain fatty acids.::Pongo abelii (taxid: 9601) portable COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 99.83::9-155 PF13193::AMP-binding_C 99.57::64-143 GO:0005789::endoplasmic reticulum membrane confident hh_1pg4_A_1::12-57,60-61,66-73,79-90,92-155 confident psy77 75 Q8VCW8::Acyl-CoA synthetase family member 2, mitochondrial ::Acyl-CoA synthases catalyze the initial reaction in fatty acid metabolism, by forming a thioester with CoA. Has some preference toward medium-chain substrates. Plays a role in adipodyte differentiation.::Mus musculus (taxid: 10090) confident COG0318::CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] 98.70::3-51 PF13193::AMP-binding_C 98.40::4-39 GO:0005875::microtubule associated complex confident hh_2v7b_A_1::4-14,17-47 very confident psy2895 293 A2S5Y9::Lipoyl synthase ::Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.::Burkholderia mallei (strain NCTC 10229) (taxid: 412022) very confident COG0320::LipA Lipoate synthase [Coenzyme metabolism] 100.00::9-292 PF04055::Radical_SAM 99.83::66-229 GO:0009249::protein lipoylation very confident hh_3t7v_A_1::27-49,52-119,121-137,139-144,146-151,154-201,204-244 very confident psy6794 165 Q99M04::Lipoyl synthase, mitochondrial ::Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.::Mus musculus (taxid: 10090) confident COG0320::LipA Lipoate synthase [Coenzyme metabolism] 99.97::1-101 no hit no match GO:0005739::mitochondrion confident hh_1olt_A_1::4-38 portable psy6796 123 Q2LYK1::Lipoyl synthase, mitochondrial ::Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0320::LipA Lipoate synthase [Coenzyme metabolism] 99.95::46-108 no hit no match GO:0044237::cellular metabolic process confident no hit no match psy3135 229 Q0VFH3::Putative lipoyltransferase 2, mitochondrial ::Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.::Xenopus tropicalis (taxid: 8364) confident COG0321::LipB Lipoate-protein ligase B [Coenzyme metabolism] 100.00::4-216 PF03099::BPL_LplA_LipB 99.61::54-166 GO:0009249::protein lipoylation confident hh_1w66_A_1::3-31,38-61,69-104,106-139,141-217 very confident psy6495 235 Q0VFH3::Putative lipoyltransferase 2, mitochondrial ::Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.::Xenopus tropicalis (taxid: 8364) confident COG0321::LipB Lipoate-protein ligase B [Coenzyme metabolism] 100.00::4-221 PF03099::BPL_LplA_LipB 99.72::54-172 GO:0009249::protein lipoylation confident hh_1w66_A_1::3-32,37-39,42-58,60-62,69-104,106-126,128-145,147-224 very confident psy2898 222 A4G9C5::Octanoyltransferase ::Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.::Herminiimonas arsenicoxydans (taxid: 204773) very confident COG0321::LipB Lipoate-protein ligase B [Coenzyme metabolism] 100.00::10-221 PF03099::BPL_LplA_LipB 99.45::56-180 GO:0010629::negative regulation of gene expression confident hh_1w66_A_1::5-68,73-103,110-146,152-164,166-221 very confident psy1955 512 P40692::DNA mismatch repair protein Mlh1 ::Heterodimerizes with PMS2 to form MutL alpha, a component of the post-replicative DNA mismatch repair system (MMR). DNA repair is initiated by MutS alpha (MSH2-MSH6) or MutS beta (MSH2-MSH6) binding to a dsDNA mismatch, then MutL alpha is recruited to the heteroduplex. Assembly of the MutL-MutS-heteroduplex ternary complex in presence of RFC and PCNA is sufficient to activate endonuclease activity of PMS2. It introduces single-strand breaks near the mismatch and thus generates new entry points for the exonuclease EXO1 to degrade the strand containing the mismatch. DNA methylation would prevent cleavage and therefore assure that only the newly mutated DNA strand is going to be corrected. MutL alpha (MLH1-PMS2) interacts physically with the clamp loader subunits of DNA polymerase III, suggesting that it may play a role to recruit the DNA polymerase III to the site of the MMR. Also implicated in DNA damage signaling, a process which induces cell cycle arrest and can lead to apoptosis in case of major DNA damages. Heterodimerizes with MLH3 to form MutL gamma which plays a role in meiosis.::Homo sapiens (taxid: 9606) confident COG0323::MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] 100.00::3-306 PF01119::DNA_mis_repair 99.93::191-301 GO:0030983::mismatched DNA binding confident rp_3na3_A_2::5-126 very confident psy13676 200 B1H0C7::DNA mismatch repair protein MutL ::This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.::Uncultured termite group 1 bacterium phylotype Rs-D17 (taxid: 471821) portable COG0323::MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] 99.71::77-156 PF08676::MutL_C 99.82::73-156 GO:0032139::dinucleotide insertion or deletion binding confident hh_1h7s_A_1::38-111 confident psy1957 149 Q9P7W6::Putative MutL protein homolog 1 ::This protein is involved in the repair of mismatches in DNA.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0323::MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] 97.23::29-78 PF08676::MutL_C 97.42::35-149 GO:0044446::intracellular organelle part confident hh_3rbn_A_1::3-149 very confident psy13670 380 P54278::Mismatch repair endonuclease PMS2 ::Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MLH1 to form MutL alpha. DNA repair is initiated by MutS alpha (MSH2-MSH6) or MutS beta (MSH2-MSH6) binding to a dsDNA mismatch, then MutL alpha is recruited to the heteroduplex. Assembly of the MutL-MutS-heteroduplex ternary complex in presence of RFC and PCNA is sufficient to activate endonuclease activity of PMS2. It introduces single-strand breaks near the mismatch and thus generates new entry points for the exonuclease EXO1 to degrade the strand containing the mismatch. DNA methylation would prevent cleavage and therefore assure that only the newly mutated DNA strand is going to be corrected. MulL alpha (MLH1-PMS2) interacts physically with the clamp loader subunits of DNA polymerase III, suggesting that it may play a role to recruit the DNA polymerase III to the site of the MMR. Also implicated in DNA damage signaling, a process which induces cell cycle arrest and can lead to apoptosis in case of major DNA damages.::Homo sapiens (taxid: 9606) confident COG0323::MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] 100.00::207-380 PF08676::MutL_C 100.00::211-357 GO:0050896::response to stimulus confident hh_3ncv_A_1::207-290,293-309,314-380 very confident psy13669 172 P54278::Mismatch repair endonuclease PMS2 ::Component of the post-replicative DNA mismatch repair system (MMR). Heterodimerizes with MLH1 to form MutL alpha. DNA repair is initiated by MutS alpha (MSH2-MSH6) or MutS beta (MSH2-MSH6) binding to a dsDNA mismatch, then MutL alpha is recruited to the heteroduplex. Assembly of the MutL-MutS-heteroduplex ternary complex in presence of RFC and PCNA is sufficient to activate endonuclease activity of PMS2. It introduces single-strand breaks near the mismatch and thus generates new entry points for the exonuclease EXO1 to degrade the strand containing the mismatch. DNA methylation would prevent cleavage and therefore assure that only the newly mutated DNA strand is going to be corrected. MulL alpha (MLH1-PMS2) interacts physically with the clamp loader subunits of DNA polymerase III, suggesting that it may play a role to recruit the DNA polymerase III to the site of the MMR. Also implicated in DNA damage signaling, a process which induces cell cycle arrest and can lead to apoptosis in case of major DNA damages.::Homo sapiens (taxid: 9606) confident COG0323::MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] 100.00::1-171 PF13589::HATPase_c_3 99.73::7-110 GO:0032138::single base insertion or deletion binding confident hh_1h7s_A_1::1-171 very confident psy5349 213 A3D022::DNA mismatch repair protein MutL ::This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.::Shewanella baltica (strain OS155 / ATCC BAA-1091) (taxid: 325240) portable COG0323::MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] 100.00::1-210 PF13589::HATPase_c_3 99.69::23-126 GO:0043234::protein complex confident hh_1h7s_A_1::2-164,168-212 very confident psy7554 115 Q94ID2::Adenylate isopentenyltransferase 5, chloroplastic ::Involved in cytokinin biosynthesis. Catalyzes the transfer of an isopentenyl group from dimethylallyl diphosphate (DMAPP) to ATP and ADP.::Arabidopsis thaliana (taxid: 3702) confident COG0324::MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] 100.00::25-112 PF01715::IPPT 99.85::57-112 GO:0009536::plastid confident hh_3d3q_A_1::25-50,52-111 very confident psy15752 110 Q9ZUX7::tRNA dimethylallyltransferase 2 ::Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A). Involved in the cis-type cytokinin biosynthesis.::Arabidopsis thaliana (taxid: 3702) portable COG0324::MiaA tRNA delta(2)-isopentenylpyrophosphate transferase [Translation, ribosomal structure and biogenesis] 100.00::4-108 PF01715::IPPT 100.00::5-108 GO:0043231::intracellular membrane-bounded organelle confident hh_3eph_A_1::5-14,19-108 very confident psy2326 181 P52057::Proline synthase co-transcribed bacterial homolog protein ::::Caenorhabditis elegans (taxid: 6239) confident COG0325::Predicted enzyme with a TIM-barrel fold [General function prediction only] 100.00::6-181 PF01168::Ala_racemase_N 99.79::8-179 GO:0005622::intracellular confident hh_3r79_A_1::5-26,29-54,57-81,109-114,116-135,140-154,159-159,164-181 very confident psy2327 97 Q5R4Z1::Proline synthase co-transcribed bacterial homolog protein ::::Pongo abelii (taxid: 9601) confident COG0325::Predicted enzyme with a TIM-barrel fold [General function prediction only] 100.00::1-92 PF01168::Ala_racemase_N 97.34::5-89 GO:0030170::pyridoxal phosphate binding confident rp_3sy1_A_1::3-23,29-64 very confident psy15896 492 A3QF50::Chaperone protein HtpG ::Molecular chaperone. Has ATPase activity.::Shewanella loihica (strain ATCC BAA-1088 / PV-4) (taxid: 323850) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::1-492 PF00183::HSP90 100.00::28-492 GO:0005811::lipid particle confident hh_2gq0_A_1::100-158,160-259,262-366,390-416 very confident psy13235 186 P41148::Endoplasmin ::Molecular chaperone that functions in the processing and transport of secreted proteins. Functions in endoplasmic reticulum associated degradation (ERAD). Has ATPase activity.::Canis familiaris (taxid: 9615) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 99.92::1-126 PF00183::HSP90 100.00::1-138 GO:0005811::lipid particle confident hh_2o1u_A_1::1-8,10-132 very confident psy10019 388 P02828::Heat shock protein 83 ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Drosophila melanogaster (taxid: 7227) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::19-229 PF00183::HSP90 99.96::257-388 GO:0005829::cytosol very confident hh_1yc1_A_1::17-237 very confident psy4716 334 P02828::Heat shock protein 83 ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Drosophila melanogaster (taxid: 7227) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::80-301 PF00183::HSP90 100.00::78-311 GO:0005829::cytosol confident hh_3q6m_A_1::79-326 very confident psy15683 304 P02828::Heat shock protein 83 ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Drosophila melanogaster (taxid: 7227) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::1-213 PF00183::HSP90 100.00::1-223 GO:0005829::cytosol confident hh_3q6m_A_1::1-238 very confident psy15112 73 P02828::Heat shock protein 83 ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Drosophila melanogaster (taxid: 7227) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 92.97::7-37 PF00183::HSP90 98.97::7-73 GO:0005829::cytosol confident hh_3q6m_A_1::8-63,65-73 very confident psy4704 123 P02828::Heat shock protein 83 ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Drosophila melanogaster (taxid: 7227) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 96.11::25-87 PF00183::HSP90 98.96::54-123 GO:0005829::cytosol confident hh_3q6m_A_1::54-113,115-123 very confident psy13239 182 P08113::Endoplasmin ::Molecular chaperone that functions in the processing and transport of secreted proteins. Functions in endoplasmic reticulum associated degradation (ERAD). Has ATPase activity.::Mus musculus (taxid: 10090) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::3-182 PF00183::HSP90 100.00::4-182 GO:0005829::cytosol confident hh_2o1u_A_1::4-80,82-124,126-182 very confident psy2391 642 Q7WQ31::Chaperone protein HtpG ::Molecular chaperone. Has ATPase activity.::Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (taxid: 257310) very confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::12-640 PF00183::HSP90 100.00::195-641 GO:0005829::cytosol very confident hh_2gq0_A_1::244-380,382-384,388-512,535-561 very confident psy13233 704 P08113::Endoplasmin ::Molecular chaperone that functions in the processing and transport of secreted proteins. Functions in endoplasmic reticulum associated degradation (ERAD). Has ATPase activity.::Mus musculus (taxid: 10090) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::61-665 PF00183::HSP90 100.00::246-666 GO:0043231::intracellular membrane-bounded organelle confident hh_1qy5_A_1::60-176,178-291,295-295,297-308,310-331 very confident psy16067 1386 P04810::Heat shock protein 83 (Fragment) ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Drosophila simulans (taxid: 7240) portable COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::1151-1373 PF03098::An_peroxidase 100.00::611-1171 GO:0016887::ATPase activity confident hh_2cg9_A_1::1224-1378 very confident psy15682 224 P02828::Heat shock protein 83 ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Drosophila melanogaster (taxid: 7227) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 100.00::1-189 PF13589::HATPase_c_3 99.38::25-124 GO:0005829::cytosol confident hh_1yc1_A_1::1-32,49-196 very confident psy15111 93 P07901::Heat shock protein HSP 90-alpha ::Molecular chaperone that promotes the maturation, structural maintenance and proper regulation of specific target proteins involved for instance in cell cycle control and signal transduction. Undergoes a functional cycle that is linked to its ATPase activity. This cycle probably induces conformational changes in the client proteins, thereby causing their activation. Interacts dynamically with various co-chaperones that modulate its substrate recognition, ATPase cycle and chaperone function.::Mus musculus (taxid: 10090) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 99.83::36-90 PF13589::HATPase_c_3 94.14::57-75 GO:0005829::cytosol very confident hh_2cg9_A_1::37-89 very confident psy15895 124 Q9CQN1::Heat shock protein 75 kDa, mitochondrial ::Chaperone that expresses an ATPase activity.::Mus musculus (taxid: 10090) confident COG0326::HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] 99.91::23-124 PF13589::HATPase_c_3 98.93::48-122 GO:0005829::cytosol confident hh_2o1u_A_1::8-76,80-124 very confident psy14815 479 Q32PJ6::Probable cytosolic iron-sulfur protein assembly protein CIAO1 ::Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Seems to specifically modulate the transactivation activity of WT1. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation.::Bos taurus (taxid: 9913) confident COG0327::Uncharacterized conserved protein [Function unknown] 99.96::355-476 PF01784::NIF3 100.00::359-476 GO:0097361::CIA complex confident no hit no match psy3458 151 B1IPU4::Ribonuclease H ::Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.::Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) (taxid: 481805) confident COG0328::RnhA Ribonuclease HI [DNA replication, recombination, and repair] 100.00::5-150 PF00075::RNase_H 99.96::5-150 GO:0044424::intracellular part confident hh_2qkb_A_1::3-119,121-150 very confident psy12088 289 P62142::Serine/threonine-protein phosphatase PP1-beta catalytic subunit ::Protein phosphatase (PP1) is essential for cell division, it participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Involved in regulation of ionic conductances and long-term synaptic plasticity. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.::Rattus norvegicus (taxid: 10116) portable COG0328::RnhA Ribonuclease HI [DNA replication, recombination, and repair] 93.80::151-190 PF00149::Metallophos 97.71::94-138 GO:0031981::nuclear lumen confident hh_3ll8_A_1::7-14,17-32,35-43,57-139,152-168,176-191,193-237 very confident psy16696 296 O60121::Uncharacterized protein C16G5.07c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 100.00::74-259 PF01145::Band_7 99.97::73-240 GO:0005758::mitochondrial intermembrane space confident hh_3bk6_A_1::98-105,107-250 very confident psy2816 83 Q32LL2::Stomatin-like protein 2 ::::Bos taurus (taxid: 9913) confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 99.84::1-83 PF01145::Band_7 99.63::1-83 GO:0005758::mitochondrial intermembrane space confident hh_2rpb_A_1::26-83 very confident psy2921 305 P24156::Protein l(2)37Cc ::Required for larval metabolism or for the progression of the larva into a pupa.::Drosophila melanogaster (taxid: 7227) very confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 99.97::1-238 PF01145::Band_7 99.95::1-168 GO:0005774::vacuolar membrane very confident hh_3bk6_A_1::30-54,58-71,73-75,79-84,86-92,94-163,178-225 very confident psy5086 124 Q99623::Prohibitin-2 ::Acts as a mediator of transcriptional repression by nuclear hormone receptors via recruitment of histone deacetylases (By similarity). Functions as an estrogen receptor (ER)-selective coregulator that potentiates the inhibitory activities of antiestrogens and represses the activity of estrogens. Competes with NCOA1 for modulation of ER transcriptional activity. Probably involved in regulating mitochondrial respiration activity and in aging.::Homo sapiens (taxid: 9606) confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 99.70::29-116 PF01145::Band_7 99.59::42-112 GO:0005774::vacuolar membrane confident hh_2rpb_A_1::80-117 portable psy9223 457 O28852::Uncharacterized protein AF_1420 ::::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 99.97::57-269 PF01145::Band_7 99.94::65-225 GO:0005856::cytoskeleton confident hh_4fvg_A_1::93-210 very confident psy14362 422 Q7PPU9::Band 7 protein AGAP004871 ::::Anopheles gambiae (taxid: 7165) confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 100.00::198-386 PF01145::Band_7 99.96::211-384 GO:0005856::cytoskeleton confident hh_4fvg_A_1::239-369 very confident psy8926 263 Q28J34::Erlin-2 ::Mediates the endoplasmic reticulum-associated degradation (ERAD) of inositol 1,4,5-trisphosphate receptors (IP3Rs).::Xenopus tropicalis (taxid: 8364) very confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 100.00::11-224 PF01145::Band_7 99.95::24-186 GO:0043234::protein complex very confident hh_1win_A_1::55-138,140-157,160-185 confident psy9118 293 Q28J34::Erlin-2 ::Mediates the endoplasmic reticulum-associated degradation (ERAD) of inositol 1,4,5-trisphosphate receptors (IP3Rs).::Xenopus tropicalis (taxid: 8364) very confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 100.00::57-278 PF01145::Band_7 99.95::70-234 GO:0043234::protein complex very confident hh_1win_A_1::101-183,185-203,206-230 confident psy5087 388 Q99623::Prohibitin-2 ::Acts as a mediator of transcriptional repression by nuclear hormone receptors via recruitment of histone deacetylases (By similarity). Functions as an estrogen receptor (ER)-selective coregulator that potentiates the inhibitory activities of antiestrogens and represses the activity of estrogens. Competes with NCOA1 for modulation of ER transcriptional activity. Probably involved in regulating mitochondrial respiration activity and in aging.::Homo sapiens (taxid: 9606) very confident COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 99.97::29-242 PF01145::Band_7 99.95::42-208 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_3bk6_A_1::74-111,114-125,127-129,131-202,217-265 very confident psy928 88 O60121::Uncharacterized protein C16G5.07c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0330::HflC Membrane protease subunits, stomatin/prohibitin homologs [Posttranslational modification, protein turnover, chaperones] 97.78::6-77 no hit no match GO:0005739::mitochondrion confident hh_3bk6_A_1::3-41,46-63 portable psy9442 127 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) confident COG0331::FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] 99.55::1-117 PF00698::Acyl_transf_1 99.68::1-115 GO:0006629::lipid metabolic process confident hh_3hhd_A_1::1-118 very confident psy9443 127 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) confident COG0331::FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] 99.55::1-117 PF00698::Acyl_transf_1 99.68::1-115 GO:0006629::lipid metabolic process confident hh_2vz8_A_1::1-117 very confident psy11092 278 Q8T3L6::Probable malonyl-CoA-acyl carrier protein transacylase, mitochondrial ::Catalyzes the transfer of a malonyl moiety from malonyl-CoA to the free thiol group of the phosphopantetheine arm of the ACP protein. This suggests the existence of the biosynthesis of fatty acids in mitochondrias.::Drosophila melanogaster (taxid: 7227) confident COG0331::FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] 100.00::107-278 PF00698::Acyl_transf_1 100.00::110-278 GO:0009536::plastid confident hh_2c2n_A_1::105-129,131-278 very confident psy2373 358 Q6G9Y3::Malonyl CoA-acyl carrier protein transacylase ::::Staphylococcus aureus (strain MSSA476) (taxid: 282459) confident COG0331::FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] 100.00::1-286 PF00698::Acyl_transf_1 100.00::3-281 GO:0009570::chloroplast stroma confident hh_3sbm_A_1::1-77,79-256,259-282 very confident psy2374 358 Q6G9Y3::Malonyl CoA-acyl carrier protein transacylase ::::Staphylococcus aureus (strain MSSA476) (taxid: 282459) confident COG0331::FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] 100.00::1-286 PF00698::Acyl_transf_1 100.00::3-281 GO:0009570::chloroplast stroma confident hh_3g87_A_1::1-256,259-357 very confident psy4741 62 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG0331::FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism] 99.55::1-61 PF00698::Acyl_transf_1 99.71::1-62 GO:0044444::cytoplasmic part confident hh_3hhd_A_1::1-62 very confident psy1913 535 P54385::Glutamate dehydrogenase, mitochondrial ::::Drosophila melanogaster (taxid: 7227) very confident COG0334::GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] 100.00::43-534 PF00208::ELFV_dehydrog 100.00::242-532 GO:0006116::NADH oxidation very confident hh_3mw9_A_1::37-68,70-321,324-534 very confident psy8193 428 P96110::Glutamate dehydrogenase ::::Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) confident COG0334::GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] 100.00::19-428 PF00208::ELFV_dehydrog 100.00::194-427 GO:0055114::oxidation-reduction process confident hh_1v9l_A_1::17-291,293-428 very confident psy8194 428 P96110::Glutamate dehydrogenase ::::Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) confident COG0334::GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] 100.00::19-428 PF00208::ELFV_dehydrog 100.00::194-427 GO:0055114::oxidation-reduction process confident hh_1v9l_A_1::17-291,293-428 very confident psy8192 428 P96110::Glutamate dehydrogenase ::::Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) confident COG0334::GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] 100.00::19-428 PF00208::ELFV_dehydrog 100.00::194-427 GO:0055114::oxidation-reduction process confident hh_1v9l_A_1::17-291,293-428 very confident psy14499 262 P96110::Glutamate dehydrogenase ::::Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) confident COG0334::GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism] 100.00::1-262 PF00208::ELFV_dehydrog 100.00::28-261 GO:0055114::oxidation-reduction process confident hh_2tmg_A_1::1-125,127-262 very confident psy3777 99 Q0BH66::50S ribosomal protein L19 ::This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.::Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (taxid: 339670) very confident COG0335::RplS Ribosomal protein L19 [Translation, ribosomal structure and biogenesis] 100.00::1-98 PF01245::Ribosomal_L19 100.00::1-98 GO:0003735::structural constituent of ribosome confident hh_3v2d_T_1::2-12,16-98 very confident psy3772 119 Q0BH66::50S ribosomal protein L19 ::This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.::Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) (taxid: 339670) very confident COG0335::RplS Ribosomal protein L19 [Translation, ribosomal structure and biogenesis] 100.00::1-115 PF01245::Ribosomal_L19 100.00::1-116 GO:0005886::plasma membrane very confident hh_3v2d_T_1::2-12,16-116 very confident psy12656 291 Q9VHN6::39S ribosomal protein L19, mitochondrial ::::Drosophila melanogaster (taxid: 7227) very confident COG0335::RplS Ribosomal protein L19 [Translation, ribosomal structure and biogenesis] 100.00::65-179 PF01245::Ribosomal_L19 100.00::64-179 GO:0031965::nuclear membrane confident hh_3v2d_T_1::63-76,82-181 very confident psy3768 246 A0K5P7::tRNA (guanine-N(1)-)-methyltransferase ::Specifically methylates guanosine-37 in various tRNAs.::Burkholderia cenocepacia (strain HI2424) (taxid: 331272) very confident COG0336::TrmD tRNA-(guanine-N1)-methyltransferase [Translation, ribosomal structure and biogenesis] 100.00::1-243 PF01746::tRNA_m1G_MT 100.00::23-220 GO:0030488::tRNA methylation confident hh_3ky7_A_1::1-77,79-79,81-228,233-245 very confident psy3767 246 A0K5P7::tRNA (guanine-N(1)-)-methyltransferase ::Specifically methylates guanosine-37 in various tRNAs.::Burkholderia cenocepacia (strain HI2424) (taxid: 331272) very confident COG0336::TrmD tRNA-(guanine-N1)-methyltransferase [Translation, ribosomal structure and biogenesis] 100.00::1-243 PF01746::tRNA_m1G_MT 100.00::23-220 GO:0030488::tRNA methylation confident hh_3ky7_A_1::1-77,79-79,81-228,233-245 very confident psy3035 161 Q9GLN7::Angiotensin-converting enzyme ::Converts angiotensin I to angiotensin II by release of the terminal His-Leu, this results in an increase of the vasoconstrictor activity of angiotensin. Also able to inactivate bradykinin, a potent vasodilator. Has also a glycosidase activity which releases GPI-anchored proteins from the membrane by cleaving the mannose linkage in the GPI moiety.::Pan troglodytes (taxid: 9598) portable COG0339::Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] 91.30::21-113 PF01401::Peptidase_M2 100.00::1-158 GO:0005615::extracellular space confident hh_1r42_A_1::1-19,21-122,124-157 very confident psy4038 371 Q01992::Mitochondrial intermediate peptidase ::Cleaves proteins, imported into the mitochondrion, to their mature size.::Rattus norvegicus (taxid: 10116) confident COG0339::Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] 100.00::2-353 PF01432::Peptidase_M3 100.00::3-354 GO:0019538::protein metabolic process confident hh_2o3e_A_1::11-65,68-353 very confident psy6919 638 P50747::Biotin--protein ligase ::Post-translational modification of specific protein by attachment of biotin. Acts on various carboxylases such as acetyl-CoA-carboxylase, pyruvate carboxylase, propionyl CoA carboxylase, and 3-methylcrotonyl CoA carboxylase.::Homo sapiens (taxid: 9606) portable COG0340::BirA Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism] 100.00::387-623 PF03099::BPL_LplA_LipB 99.83::386-516 GO:0005829::cytosol confident hh_2dxu_A_1::373-443,447-467,470-485,487-496,501-501,506-530,536-556,558-572,574-584,586-586,588-622 very confident psy14115 319 Q4QR99::Queuine tRNA-ribosyltransferase ::Interacts with QTRTD1 to form an active queuine tRNA-ribosyltransferase. This enzyme exchanges queuine for the guanine at the wobble position of tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr), thereby forming the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).::Rattus norvegicus (taxid: 10116) confident COG0343::Tgt Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis] 100.00::1-213 PF01702::TGT 100.00::1-209 GO:0008616::queuosine biosynthetic process confident hh_2ash_A_1::1-24,26-214 very confident psy11035 77 B4SSS1::Queuine tRNA-ribosyltransferase ::Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis-dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine).::Stenotrophomonas maltophilia (strain R551-3) (taxid: 391008) confident COG0343::Tgt Queuine/archaeosine tRNA-ribosyltransferase [Translation, ribosomal structure and biogenesis] 99.96::10-77 no hit no match GO:0005829::cytosol confident hh_2ash_A_1::7-17,20-77 very confident psy6714 303 Q7A0U1::Pyrroline-5-carboxylate reductase ::::Staphylococcus aureus (strain MW2) (taxid: 196620) portable COG0345::ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] 100.00::132-301 PF03446::NAD_binding_2 99.47::132-272 GO:0005737::cytoplasm confident hh_2ahr_A_1::131-145,147-197,202-300 very confident psy316 341 Q20848::Putative pyrroline-5-carboxylate reductase ::::Caenorhabditis elegans (taxid: 6239) confident COG0345::ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] 100.00::64-341 PF14748::P5CR_dimer 99.88::233-341 GO:0005618::cell wall confident hh_2ahr_A_1::64-87,92-144,152-174,181-184,186-212,215-290,299-341 very confident psy7894 1006 Q01780::Exosome component 10 ::Putative catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. EXOSC10 has 3'-5' exonuclease activity (By similarity). EXOSC10 is required for nucleolar localization of C1D and probably mediates the association of SKIV2L2, C1D and MPP6 wth the RNA exosome involved in the maturation of 5.8S rRNA.::Homo sapiens (taxid: 9606) portable COG0349::Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] 100.00::252-613 PF01612::DNA_pol_A_exo1 99.94::249-417 GO:0005737::cytoplasm confident hh_2hbj_A_1::168-420,426-458,460-540 very confident psy12569 94 Q9VIF1::Probable exonuclease mut-7 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG0349::Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] 99.88::1-81 PF01612::DNA_pol_A_exo1 99.51::2-68 GO:0030529::ribonucleoprotein complex confident hh_1yt3_A_1::2-74 very confident psy12568 114 Q9VIF1::Probable exonuclease mut-7 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG0349::Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] 99.86::5-112 PF01612::DNA_pol_A_exo1 99.32::12-67 GO:0030529::ribonucleoprotein complex confident hh_3cym_A_1::11-72 very confident psy5651 843 Q00577::Transcriptional activator protein Pur-alpha ::This is a probable transcription activator that specifically binds the purine-rich single strand of the PUR element located upstream of the MYC gene. May play a role in the initiation of DNA replication and in recombination.::Homo sapiens (taxid: 9606) portable COG0349::Rnd Ribonuclease D [Translation, ribosomal structure and biogenesis] 100.00::22-285 PF04845::PurA 100.00::309-506 GO:0003690::double-stranded DNA binding confident hh_2hbj_A_1::18-65,67-77,80-132,145-160,163-164,172-264,268-286 very confident psy2899 139 A4GAG8::ATP synthase epsilon chain ::Produces ATP from ADP in the presence of a proton gradient across the membrane.::Herminiimonas arsenicoxydans (taxid: 204773) very confident COG0355::AtpC F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) [Energy production and conversion] 100.00::1-131 PF02823::ATP-synt_DE_N 99.96::1-82 GO:0015986::ATP synthesis coupled proton transport confident hh_1aqt_A_1::1-15,17-54,56-134 very confident psy9917 219 P35434::ATP synthase subunit delta, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP turnover in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and of the central stalk which is part of the complex rotary element. Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.::Rattus norvegicus (taxid: 10116) confident COG0355::AtpC F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) [Energy production and conversion] 100.00::17-150 PF02823::ATP-synt_DE_N 99.93::21-102 GO:0016887::ATPase activity confident hh_2ck3_H_1::18-150 very confident psy4521 223 Q8CIW5::Twinkle protein, mitochondrial ::Involved in mitochondrial DNA (mtDNA) metabolism. Could function as an adenine nucleotide-dependent DNA helicase. Function infered to be critical for lifetime maintenance of mtDNA integrity. May be a key regulator of mtDNA copy number in mammals.::Mus musculus (taxid: 10090) portable COG0358::DnaG DNA primase (bacterial type) [DNA replication, recombination, and repair] 99.13::3-152 PF13155::Toprim_2 99.33::56-139 GO:0005739::mitochondrion confident hh_2au3_A_1::6-70,73-80,82-83,85-130,132-156 confident psy2272 276 Q6GVM3::Eukaryotic translation initiation factor 1A, Y-chromosomal ::Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.::Pan troglodytes (taxid: 9598) confident COG0361::InfA Translation initiation factor 1 (IF-1) [Translation, ribosomal structure and biogenesis] 99.92::1-59 PF01176::eIF-1a 99.85::1-54 GO:0005829::cytosol confident hh_1d7q_A_1::1-82,84-104 very confident psy9637 490 O83351::6-phosphogluconate dehydrogenase, decarboxylating ::Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.::Treponema pallidum (strain Nichols) (taxid: 243276) confident COG0362::Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] 100.00::4-486 PF00393::6PGD 100.00::358-486 GO:0005829::cytosol confident hh_2p4q_A_1::5-48,50-324,326-339 very confident psy9641 145 P53319::6-phosphogluconate dehydrogenase, decarboxylating 2 ::Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0362::Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] 100.00::1-141 PF00393::6PGD 100.00::1-141 GO:0005829::cytosol confident hh_2p4q_A_1::2-141 very confident psy10372 63 A6LHV2::Glucosamine-6-phosphate deaminase ::Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.::Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) (taxid: 435591) confident COG0363::NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] 99.61::1-63 PF01182::Glucosamine_iso 99.23::1-63 GO:0005737::cytoplasm confident hh_1ne7_A_1::1-63 very confident psy10371 219 Q29NT9::Glucosamine-6-phosphate isomerase ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG0363::NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] 100.00::1-218 PF01182::Glucosamine_iso 100.00::12-210 GO:0005737::cytoplasm confident hh_1ne7_A_1::1-218 very confident psy2121 66 Q9XVJ2::Probable glucosamine-6-phosphate isomerase ::::Caenorhabditis elegans (taxid: 6239) confident COG0363::NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] 99.47::5-56 PF01182::Glucosamine_iso 96.72::5-25 GO:0005737::cytoplasm confident hh_1ne7_A_1::2-4,7-65 very confident psy1382 254 Q9VZ64::Probable 6-phosphogluconolactonase ::Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.::Drosophila melanogaster (taxid: 7227) confident COG0363::NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] 100.00::3-221 PF01182::Glucosamine_iso 100.00::2-189 GO:0005829::cytosol confident hh_1y89_A_1::3-22,24-65,67-98,106-107,110-134,137-202,206-221 very confident psy906 84 Q5TNH5::Glucosamine-6-phosphate isomerase ::::Anopheles gambiae (taxid: 7165) confident COG0363::NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] 99.84::4-76 PF01182::Glucosamine_iso 99.20::6-45 GO:0006091::generation of precursor metabolites and energy confident hh_1ne7_A_1::5-83 very confident psy706 91 A6LHV2::Glucosamine-6-phosphate deaminase ::Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.::Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) (taxid: 435591) confident COG0363::NagB 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism] 99.96::1-85 PF01182::Glucosamine_iso 99.97::1-83 GO:0044237::cellular metabolic process confident hh_3hn6_A_1::1-90 very confident psy17432 83 O55044::Glucose-6-phosphate 1-dehydrogenase ::::Cricetulus griseus (taxid: 10029) confident COG0364::Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] 100.00::1-83 PF02781::G6PD_C 100.00::6-83 GO:0005813::centrosome very confident hh_2bh9_A_1::1-83 very confident psy14311 199 O88813::Long-chain-fatty-acid--CoA ligase 5 ::Acyl-CoA synthetases (ACSL) activates long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. ACSL5 may sensitize epithelial cells to apoptosis specifically triggered by the death ligand TRAIL at the villus tip of the crypt-villus axis of the small intestine (By similarity). May have a role in the survival of glioma cells (By similarity). May activate fatty acids from exogenous sources for the synthesis of triacylglycerol destined for intracellular storage. It was suggested that it may also stimulate fatty acid oxidation. Utilizes a wide range of saturated fatty acids with a preference for C16-C18 unsaturated fatty acids.::Rattus norvegicus (taxid: 10116) confident COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 100.00::2-193 PF00501::AMP-binding 99.97::2-169 GO:0001676::long-chain fatty acid metabolic process confident hh_3tsy_A_1::2-150,160-194 very confident psy12986 230 Q9P265::Disco-interacting protein 2 homolog B ::::Homo sapiens (taxid: 9606) confident COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 99.96::36-219 PF00501::AMP-binding 99.92::40-219 GO:0005634::nucleus confident hh_3gqw_A_1::38-154,159-178,180-218 confident psy10051 63 A4WJG1::Acetyl-coenzyme A synthetase ::::Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) (taxid: 340102) confident COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 99.40::2-59 PF00501::AMP-binding 96.94::2-44 GO:0005730::nucleolus confident rp_1ry2_A_1::7-52 very confident psy10058 59 Q9VP61::Acetyl-coenzyme A synthetase ::Activates acetate so that it can be used for lipid synthesis or for energy generation.::Drosophila melanogaster (taxid: 7227) confident COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 99.29::5-58 PF00501::AMP-binding 98.66::7-56 GO:0005730::nucleolus very confident hh_1pg4_A_1::6-56 very confident psy13807 204 Q8VCW8::Acyl-CoA synthetase family member 2, mitochondrial ::Acyl-CoA synthases catalyze the initial reaction in fatty acid metabolism, by forming a thioester with CoA. Has some preference toward medium-chain substrates. Plays a role in adipodyte differentiation.::Mus musculus (taxid: 10090) portable COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 100.00::1-201 PF00501::AMP-binding 99.93::2-144 GO:0005829::cytosol confident hh_3r44_A_1::2-32,40-66,68-87,89-184,186-203 very confident psy13808 190 Q8VCW8::Acyl-CoA synthetase family member 2, mitochondrial ::Acyl-CoA synthases catalyze the initial reaction in fatty acid metabolism, by forming a thioester with CoA. Has some preference toward medium-chain substrates. Plays a role in adipodyte differentiation.::Mus musculus (taxid: 10090) portable COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 99.95::18-189 PF00501::AMP-binding 99.76::14-189 GO:0043231::intracellular membrane-bounded organelle confident hh_3tsy_A_1::16-77,81-131,133-165,167-189 very confident psy8076 737 A4WJG1::Acetyl-coenzyme A synthetase ::::Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) (taxid: 340102) confident COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 100.00::69-723 PF00501::AMP-binding 100.00::83-583 GO:0044710::single-organism metabolic process confident hh_3g7s_A_1::78-90,92-190,200-212,215-223,235-270,283-300,302-328,330-344,350-386,389-440,444-449,451-461,467-468,507-528,532-628,641-641,673-725 very confident psy12107 334 Q9S725::4-coumarate--CoA ligase 2 ::Produces CoA thioesters of a variety of hydroxy- and methoxy-substituted cinnamic acids, which are used to synthesize several phenylpropanoid-derived compounds, including anthocyanins, flavonoids, isoflavonoids, coumarins, lignin, suberin and wall-bound phenolics.::Arabidopsis thaliana (taxid: 3702) portable COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 100.00::38-330 PF00501::AMP-binding 100.00::57-292 GO:1901576::organic substance biosynthetic process confident hh_3r44_A_1::54-95,103-130,132-204,209-259,261-304,306-332 very confident psy12528 258 Q9VP61::Acetyl-coenzyme A synthetase ::Activates acetate so that it can be used for lipid synthesis or for energy generation.::Drosophila melanogaster (taxid: 7227) confident COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 99.97::11-230 PF13193::AMP-binding_C 99.32::140-218 GO:0005730::nucleolus confident hh_1pg4_A_1::36-40,42-80,87-123,133-135,140-254 very confident psy12100 93 Q3Z5X2::Probable crotonobetaine/carnitine-CoA ligase ::Could catalyze the transfer of CoA to carnitine, generating the initial carnitinyl-CoA needed for the CaiB reaction cycle.::Shigella sonnei (strain Ss046) (taxid: 300269) portable COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 99.86::1-91 PF13193::AMP-binding_C 99.13::37-93 GO:0044711::single-organism biosynthetic process confident hh_2d1s_A_1::1-19,23-92 very confident psy10049 80 B0TPY4::Acetyl-coenzyme A synthetase ::::Shewanella halifaxensis (strain HAW-EB4) (taxid: 458817) confident COG0365::Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] 97.83::50-80 no hit no match GO:0044237::cellular metabolic process confident hh_1pg4_A_1::3-26,41-80 very confident psy15648 567 O06994::Oligo-1,6-glucosidase 1 ::Hydrolyzes various disaccharides such as sucrose, maltose, and isomaltose with different efficiencies. Also hydrolyzes longer maltodextrins from maltotriose up to maltohexaose, but not maltoheptaose, palatinose, isomaltotriose, or isomaltotetraose.::Bacillus subtilis (strain 168) (taxid: 224308) confident COG0366::AmyA Glycosidases [Carbohydrate transport and metabolism] 100.00::7-379 PF00128::Alpha-amylase 99.97::6-270 GO:0005622::intracellular confident hh_2zic_A_1::5-19,28-97,101-105,123-143,149-171,173-198,206-362,364-378 very confident psy12953 136 Q45101::Oligo-1,6-glucosidase ::::Bacillus coagulans (taxid: 1398) confident COG0366::AmyA Glycosidases [Carbohydrate transport and metabolism] 99.93::31-131 PF00128::Alpha-amylase 99.93::50-129 GO:0005829::cytosol confident hh_1zja_A_1::23-129 very confident psy9329 102 Q64319::Neutral and basic amino acid transport protein rBAT ::Involved in the high-affinity sodium-independent transport of cystine and neutral and dibasic amino acids (system B(0,+)-like activity). May function as an activator of SLC7A9 and be involved in the high-affinity reabsorption of cystine in the kidney proximal tubule.::Rattus norvegicus (taxid: 10116) confident COG0366::AmyA Glycosidases [Carbohydrate transport and metabolism] 99.87::1-101 PF00128::Alpha-amylase 99.82::1-102 GO:0005829::cytosol confident hh_1zja_A_1::1-40,43-43,46-101 very confident psy12584 94 Q64319::Neutral and basic amino acid transport protein rBAT ::Involved in the high-affinity sodium-independent transport of cystine and neutral and dibasic amino acids (system B(0,+)-like activity). May function as an activator of SLC7A9 and be involved in the high-affinity reabsorption of cystine in the kidney proximal tubule.::Rattus norvegicus (taxid: 10116) portable COG0366::AmyA Glycosidases [Carbohydrate transport and metabolism] 99.81::1-94 PF00128::Alpha-amylase 99.71::1-94 GO:0043229::intracellular organelle confident hh_2zic_A_1::1-38,50-94 very confident psy8670 224 Q9Z3R8::Probable alpha-glucosidase ::::Rhizobium meliloti (strain 1021) (taxid: 266834) confident COG0366::AmyA Glycosidases [Carbohydrate transport and metabolism] 99.98::41-200 PF00128::Alpha-amylase 99.97::60-193 GO:0043229::intracellular organelle confident hh_1zja_A_1::33-69,71-193 very confident psy15652 92 O06994::Oligo-1,6-glucosidase 1 ::Hydrolyzes various disaccharides such as sucrose, maltose, and isomaltose with different efficiencies. Also hydrolyzes longer maltodextrins from maltotriose up to maltohexaose, but not maltoheptaose, palatinose, isomaltotriose, or isomaltotetraose.::Bacillus subtilis (strain 168) (taxid: 224308) confident COG0366::AmyA Glycosidases [Carbohydrate transport and metabolism] 99.72::1-91 PF00128::Alpha-amylase 99.57::2-49 GO:0046352::disaccharide catabolic process confident hh_3k8k_A_1::2-48 very confident psy18015 708 Q8BFS9::Asparagine synthetase domain-containing protein 1 ::::Mus musculus (taxid: 10090) confident COG0367::AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] 100.00::215-707 PF00733::Asn_synthase 99.97::467-708 GO:0005829::cytosol confident hh_1ct9_A_1::244-269,275-311,313-337,339-390,395-397,427-445,448-484,498-535,541-556,564-593,596-609,621-648,654-708 very confident psy15141 95 Q5ZJU3::Asparagine synthetase [glutamine-hydrolyzing] ::::Gallus gallus (taxid: 9031) confident COG0367::AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism] 99.95::1-93 PF13522::GATase_6 99.54::31-92 GO:0005829::cytosol confident hh_1ct9_A_1::2-40,44-68,70-93 very confident psy12843 103 A2AI05::NADPH-dependent diflavin oxidoreductase 1 ::Oxidoreductase that catalyzes the NADP-dependent reduction of cytochrome c and one-electron acceptors, such as doxorubicin, potassium ferricyanide and menadione (in vitro).::Mus musculus (taxid: 10090) confident COG0369::CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] 99.94::1-101 PF00175::NAD_binding_1 99.92::1-101 GO:0055114::oxidation-reduction process confident hh_1tll_A_1::1-26,29-101 very confident psy8996 95 Q62600::Nitric oxide synthase, endothelial ::Produces nitric oxide (NO) which is implicated in vascular smooth muscle relaxation through a cGMP-mediated signal transduction pathway. NO mediates vascular endothelial growth factor (VEGF)-induced angiogenesis in coronary vessels and promotes blood clotting through the activation of platelets.::Rattus norvegicus (taxid: 10116) confident COG0369::CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] 99.71::5-92 PF00258::Flavodoxin_1 99.80::10-92 GO:0005829::cytosol confident hh_1tll_A_1::5-81 very confident psy12838 494 Q9UHB4::NADPH-dependent diflavin oxidoreductase 1 ::Oxidoreductase that catalyzes the NADP-dependent reduction of cytochrome c and one-electron acceptors, such as doxorubicin, potassium ferricyanide and menadione (in vitro).::Homo sapiens (taxid: 9606) confident COG0369::CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] 100.00::77-493 PF00667::FAD_binding_1 100.00::76-294 GO:0005856::cytoskeleton confident hh_2bmw_A_1::77-124,141-141,210-211,250-362,364-412,414-429,449-451,453-453,471-471,475-493 very confident psy15286 707 Q9Z0J4::Nitric oxide synthase, brain ::Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. In the brain and peripheral nervous system, NO displays many properties of a neurotransmitter. Probably has nitrosylase activity and mediates cysteine S-nitrosylation of cytoplasmic target proteins such SRR. Isoform NNOS Mu may be an effector enzyme for the dystrophin complex.::Mus musculus (taxid: 10090) portable COG0369::CysJ Sulfite reductase, alpha subunit (flavoprotein) [Inorganic ion transport and metabolism] 100.00::1-681 PF00667::FAD_binding_1 100.00::83-311 GO:0043229::intracellular organelle confident rp_1tll_A_1::2-105,107-151,153-297 very confident psy11649 890 Q32KV4::Cytoplasmic dynein 2 light intermediate chain 1 ::May function as a motor for intraflagellar retrograde transport. Functions in cilia biogenesis.::Bos taurus (taxid: 9913) portable COG0370::FeoB Fe2+ transport system protein B [Inorganic ion transport and metabolism] 99.89::34-360 PF05783::DLIC 100.00::389-598 GO:0043234::protein complex confident hh_2atv_A_1::33-71,74-95,97-103,108-109,112-128,130-144,173-189,195-237 confident psy16952 161 P53396::ATP-citrate synthase ::ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues. Has a central role in de novo lipid synthesis. In nervous tissue it may be involved in the biosynthesis of acetylcholine.::Homo sapiens (taxid: 9606) confident COG0372::GltA Citrate synthase [Energy production and conversion] 96.77::94-160 PF00285::Citrate_synt 96.07::2-51 GO:0005829::cytosol confident hh_1vgp_A_2::2-69,73-78,80-87 confident psy16953 806 P53396::ATP-citrate synthase ::ATP citrate-lyase is the primary enzyme responsible for the synthesis of cytosolic acetyl-CoA in many tissues. Has a central role in de novo lipid synthesis. In nervous tissue it may be involved in the biosynthesis of acetylcholine.::Homo sapiens (taxid: 9606) very confident COG0372::GltA Citrate synthase [Energy production and conversion] 100.00::561-805 PF00285::Citrate_synt 100.00::561-792 GO:0005829::cytosol very confident hh_3mwd_B_1::198-275,278-526 very confident psy14237 360 P34575::Probable citrate synthase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) very confident COG0372::GltA Citrate synthase [Energy production and conversion] 100.00::2-310 PF00285::Citrate_synt 100.00::2-296 GO:0006950::response to stress very confident hh_1csh_A_1::2-309 very confident psy14240 106 P34575::Probable citrate synthase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG0372::GltA Citrate synthase [Energy production and conversion] 99.30::5-97 PF00285::Citrate_synt 99.34::7-95 GO:0006950::response to stress confident hh_1csh_A_1::7-82,89-96 very confident psy14235 645 Q7ZVY5::Citrate synthase, mitochondrial ::::Danio rerio (taxid: 7955) very confident COG0372::GltA Citrate synthase [Energy production and conversion] 100.00::60-460 PF00285::Citrate_synt 100.00::70-448 GO:0006950::response to stress very confident hh_1csh_A_1::30-461 very confident psy14238 203 Q29RK1::Citrate synthase, mitochondrial ::::Bos taurus (taxid: 9913) confident COG0372::GltA Citrate synthase [Energy production and conversion] 99.91::60-176 PF00285::Citrate_synt 99.94::70-180 GO:0044262::cellular carbohydrate metabolic process confident hh_1csh_A_1::30-200 very confident psy1204 71 Q96PM5::RING finger and CHY zinc finger domain-containing protein 1 ::Mediates E3-dependent ubiquitination and proteasomal degradation of target proteins, including p53/TP53, HDAC1 and CDKN1B. Preferentially acts on tetrameric p53/TP53. Contributes to the regulation of CDKN1B and p53/TP53 levels, and thereby contributes to the regulation of the cell cycle progression. Increases AR transcription factor activity.::Homo sapiens (taxid: 9606) confident COG0375::HybF Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) [General function prediction only] 98.39::25-66 PF14599::zinc_ribbon_6 100.00::1-60 GO:0005737::cytoplasm confident hh_2k2d_A_1::1-69 very confident psy4032 84 B3R3W8::NADH-quinone oxidoreductase subunit B ::NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.::Cupriavidus taiwanensis (strain R1 / LMG 19424) (taxid: 164546) confident COG0377::NuoB NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion] 100.00::2-82 PF01058::Oxidored_q6 99.89::2-68 GO:0043025::neuronal cell body confident hh_3i9v_6_1::2-24,26-31,33-83 very confident psy5271 113 Q3J829::NADH-quinone oxidoreductase subunit B 2 ::NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.::Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) (taxid: 323261) very confident COG0377::NuoB NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion] 100.00::3-111 PF01058::Oxidored_q6 99.93::23-97 GO:0043025::neuronal cell body confident hh_3i9v_6_1::4-60,62-112 very confident psy5270 352 B3R3W8::NADH-quinone oxidoreductase subunit B ::NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.::Cupriavidus taiwanensis (strain R1 / LMG 19424) (taxid: 164546) confident COG0377::NuoB NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases [Energy production and conversion] 99.56::278-342 PF14580::LRR_9 99.27::3-110 GO:0007165::signal transduction confident hh_3rfs_A_1::1-18,20-41,43-85,87-127,184-223,230-241,243-245,253-277 very confident psy17493 101 P55258::Ras-related protein Rab-8A ::May be involved in vesicular trafficking and neurotransmitter release. Together with RAB11A, RAB3IP, the exocyst complex, PARD3, PRKCI, ANXA2, CDC42 and DNMBP promotes transcytosis of PODXL to the apical membrane initiation sites (AMIS), apical surface formation and lumenogenesis. Together with MYO5B and RAB11A participates in epithelial cell polarization.::Mus musculus (taxid: 10090) confident COG0378::HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] 97.76::11-60 PF00071::Ras 99.40::7-63 GO:0005886::plasma membrane confident rp_2fu5_C_1::23-75 very confident psy5780 106 P08647::Ras-like protein 1 ::Participates in the process of sexual differentiation and the determination of cell shape. Essential for mating and for recognition of the mating pheromone, but not for vegetative growth. Does not regulate the intracellular cAMP level. Regulates two downstream pathways, namely the byr2/byr1/spk1 mitogen-activated protein kinase cascade and the cdc42 small G protein pathway. The former is relevant to mating and sporulation, whereas the latter is relevant to mating, cell growth and cell morphology.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0378::HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription] 98.07::15-68 PF00071::Ras 99.19::10-70 GO:0031090::organelle membrane confident hh_2hup_A_1::9-41,43-46,48-74 very confident psy9705 140 E1WGG8::Alpha,alpha-trehalose-phosphate synthase [UDP-forming] ::Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor.::Salmonella typhimurium (strain SL1344) (taxid: 216597) portable COG0380::OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] 99.97::1-91 PF00982::Glyco_transf_20 99.97::1-90 GO:0005811::lipid particle confident hh_1uqt_A_1::1-91 very confident psy9724 140 E1WGG8::Alpha,alpha-trehalose-phosphate synthase [UDP-forming] ::Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor.::Salmonella typhimurium (strain SL1344) (taxid: 216597) portable COG0380::OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] 100.00::1-127 PF00982::Glyco_transf_20 100.00::2-130 GO:0005811::lipid particle confident rp_1uqt_A_1::3-108 very confident psy775 1460 E1WGG8::Alpha,alpha-trehalose-phosphate synthase [UDP-forming] ::Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor.::Salmonella typhimurium (strain SL1344) (taxid: 216597) portable COG0380::OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] 100.00::138-556 PF00982::Glyco_transf_20 100.00::99-555 GO:0005811::lipid particle confident hh_3t5t_A_1::136-201,210-234,239-363,365-374,376-414,418-422,424-462,465-525,542-544,546-560 very confident psy2719 808 Q54K57::Alpha,alpha-trehalose-phosphate synthase [UDP-forming] A ::Synthesizes trehalose 6-phosphate, the precursor for the production of trehalose, the main carbohydrate storage reserve of the dormant spore. Trehalose accumulates in both prestalk and prespore cells and then is rapidly metabolized during terminal differentiation of stalk cells, while being stored in spores, where it serves as the principal energy and carbon source for germination.::Dictyostelium discoideum (taxid: 44689) confident COG0380::OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] 100.00::101-509 PF00982::Glyco_transf_20 100.00::102-508 GO:0005811::lipid particle confident hh_3t5t_A_1::108-122,126-205,217-333,335-344,346-384,388-392,394-431,433-510 very confident psy1909 92 Q2KIQ4::4-hydroxybenzoate polyprenyltransferase, mitochondrial ::Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB.::Bos taurus (taxid: 9913) confident COG0382::UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism] 99.70::1-87 PF01040::UbiA 98.01::5-38 GO:0005739::mitochondrion confident no hit no match psy1912 77 Q2KIQ4::4-hydroxybenzoate polyprenyltransferase, mitochondrial ::Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB.::Bos taurus (taxid: 9913) confident COG0382::UbiA 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism] 99.61::2-71 PF01040::UbiA 97.82::2-66 GO:0006744::ubiquinone biosynthetic process confident no hit no match psy2170 78 P49641::Alpha-mannosidase 2x ::Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.::Homo sapiens (taxid: 9606) confident COG0383::AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] 95.98::9-49 PF01074::Glyco_hydro_38 99.79::9-72 GO:0005773::vacuole confident hh_1o7d_A_1::6-71 very confident psy7082 528 Q8VHC8::Lysosomal alpha-mannosidase ::Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.::Cavia porcellus (taxid: 10141) portable COG0383::AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] 100.00::65-527 PF01074::Glyco_hydro_38 100.00::65-380 GO:0005773::vacuole confident hh_1o7d_A_1::51-342 very confident psy11173 280 P49641::Alpha-mannosidase 2x ::Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.::Homo sapiens (taxid: 9606) confident COG0383::AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] 98.60::71-169 PF01074::Glyco_hydro_38 99.96::73-186 GO:0015923::mannosidase activity confident no hit no match psy11172 75 Q16706::Alpha-mannosidase 2 ::Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.::Homo sapiens (taxid: 9606) confident COG0383::AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] 99.13::3-74 PF01074::Glyco_hydro_38 99.94::3-74 GO:0015923::mannosidase activity confident hh_3bvx_A_1::1-74 very confident psy10965 400 Q8VHC8::Lysosomal alpha-mannosidase ::Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.::Cavia porcellus (taxid: 10141) portable COG0383::AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] 100.00::4-363 PF01074::Glyco_hydro_38 100.00::1-264 GO:0031090::organelle membrane confident hh_1o7d_A_1::1-129,134-227 very confident psy7084 326 Q8VHC8::Lysosomal alpha-mannosidase ::Necessary for the catabolism of N-linked carbohydrates released during glycoprotein turnover.::Cavia porcellus (taxid: 10141) portable COG0383::AMS1 Alpha-mannosidase [Carbohydrate transport and metabolism] 98.06::67-325 PF07748::Glyco_hydro_38C 99.97::68-326 GO:0005773::vacuole confident hh_1o7d_D_1::132-173,177-179,181-217,219-231,233-242,244-326 very confident psy6055 307 Q64625::Glutathione peroxidase 6 ::::Rattus norvegicus (taxid: 10116) portable COG0386::BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones] 100.00::136-302 PF00255::GSHPx 99.94::142-237 GO:0005634::nucleus confident hh_2r37_A_1::140-172,174-250,252-305 very confident psy1629 77 P22352::Glutathione peroxidase 3 ::Protects cells and enzymes from oxidative damage, by catalyzing the reduction of hydrogen peroxide, lipid peroxides and organic hydroperoxide, by glutathione.::Homo sapiens (taxid: 9606) confident COG0386::BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones] 99.94::12-77 PF00255::GSHPx 99.40::4-38 GO:0070013::intracellular organelle lumen confident hh_2r37_A_1::5-51,53-77 very confident psy299 240 P36970::Phospholipid hydroperoxide glutathione peroxidase, mitochondrial ::Could play a major role in protecting mammals from the toxicity of ingested lipid hydroperoxides. Essential for embryonic development. Protects from radiation and oxidative damage.::Rattus norvegicus (taxid: 10116) confident COG0386::BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones] 100.00::43-240 PF08534::Redoxin 99.92::40-187 GO:0005829::cytosol confident hh_2v1m_A_1::38-201 very confident psy17819 272 Q54JM9::Nitrilase homolog 2 ::::Dictyostelium discoideum (taxid: 44689) very confident COG0388::Predicted amidohydrolase [General function prediction only] 100.00::13-266 PF00795::CN_hydrolase 99.96::15-175 GO:0005813::centrosome very confident hh_1f89_A_1::10-270 very confident psy12521 313 Q5RBM6::Beta-ureidopropionase ::Converts N-carbamyl-beta-aminoisobutyric acid and N-carbamyl-beta-alanine to, respectively, beta-aminoisobutyric acid and beta-alanine, ammonia and carbon dioxide.::Pongo abelii (taxid: 9601) confident COG0388::Predicted amidohydrolase [General function prediction only] 100.00::2-287 PF00795::CN_hydrolase 99.97::2-181 GO:0005829::cytosol confident hh_2vhh_A_1::2-23,27-45,53-60,73-294 very confident psy10159 492 Q9NFP1::Vanin-like protein 1 ::Probable hydrolase.::Drosophila melanogaster (taxid: 7227) confident COG0388::Predicted amidohydrolase [General function prediction only] 100.00::13-298 PF00795::CN_hydrolase 99.95::15-226 GO:0017159::pantetheine hydrolase activity confident hh_1f89_A_1::11-24,27-28,38-74,79-87,101-130,144-190,192-214,216-282,285-297 very confident psy3318 139 Q964D8::Beta-ureidopropionase ::Converts N-carbamyl-beta-aminoisobutyric acid and N-carbamyl-beta-alanine to, respectively, beta-aminoisobutyric acid and beta-alanine, ammonia and carbon dioxide.::Dictyostelium discoideum (taxid: 44689) portable COG0388::Predicted amidohydrolase [General function prediction only] 98.95::67-127 PF00795::CN_hydrolase 98.60::69-123 GO:0044444::cytoplasmic part confident hh_2vhh_A_1::1-3,5-82,84-128 very confident psy16215 1041 Q5WYY8::DNA polymerase IV ::Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.::Legionella pneumophila (strain Lens) (taxid: 297245) portable COG0389::DinP Nucleotidyltransferase/DNA polymerase involved in DNA repair [DNA replication, recombination, and repair] 100.00::4-428 PF00817::IMS 100.00::9-223 GO:0006281::DNA repair confident hh_3gqc_A_1::3-76,84-124,167-171,188-260,262-322,325-350,355-403,410-429 very confident psy16216 129 Q9JJN0::DNA polymerase eta ::DNA polymerase specifically involved in DNA repair. Plays an important role in translesion synthesis, where the normal high fidelity DNA polymerases cannot proceed and DNA synthesis stalls. Plays an important role in the repair of UV-induced pyrimidine dimers. Depending on the context, it inserts the correct base, but causes frequent base transitions and transversions. May play a role in hypermutation at immunoglobulin genes. Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have lyase activity. Targets POLI to replication foci.::Mus musculus (taxid: 10090) portable COG0389::DinP Nucleotidyltransferase/DNA polymerase involved in DNA repair [DNA replication, recombination, and repair] 99.60::1-128 PF00817::IMS 99.55::1-128 GO:0006281::DNA repair confident hh_4ecq_A_1::1-16,18-80,86-94,96-128 very confident psy9306 98 Q28BX9::C2 domain-containing protein 5 ::::Xenopus tropicalis (taxid: 8364) confident COG0393::Uncharacterized conserved protein [Function unknown] 97.41::12-87 PF01906::YbjQ_1 98.10::11-85 GO:0005509::calcium ion binding confident hh_2jz7_A_1::10-24,26-36,55-83 confident psy10839 232 P41893::Low molecular weight phosphotyrosine protein phosphatase ::May contribute to dephosphorylation of 'Tyr-15' of cdc2.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0394::Wzb Protein-tyrosine-phosphatase [Signal transduction mechanisms] 100.00::16-173 PF01451::LMWPc 100.00::19-170 GO:0005634::nucleus confident hh_3jvi_A_1::14-131,135-150,152-155,159-176 very confident psy4895 430 Q6IQE9::Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 ::Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.::Danio rerio (taxid: 7955) confident COG0394::Wzb Protein-tyrosine-phosphatase [Signal transduction mechanisms] 100.00::248-426 PF01451::LMWPc 100.00::251-422 GO:0035335::peptidyl-tyrosine dephosphorylation confident hh_3jvi_A_1::247-280,302-369,376-402,404-429 very confident psy11078 86 Q5RBR7::Acyl-protein thioesterase 1 ::Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has depalmitoylating activity and also low lysophospholipase activity.::Pongo abelii (taxid: 9601) confident COG0400::Predicted esterase [General function prediction only] 99.32::6-70 PF02230::Abhydrolase_2 99.53::10-70 GO:0004091::carboxylesterase activity confident hh_1fj2_A_1::7-72 very confident psy2496 102 Q94AC1::Rhodanese-like domain-containing protein 6 ::::Arabidopsis thaliana (taxid: 3702) portable COG0400::Predicted esterase [General function prediction only] 98.66::6-94 PF03959::FSH1 99.90::1-97 GO:0043231::intracellular membrane-bounded organelle confident hh_1ycd_A_1::2-27,31-46,51-94 very confident psy7866 109 Q91W43::Glycine dehydrogenase [decarboxylating], mitochondrial ::The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.::Mus musculus (taxid: 10090) confident COG0403::GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism] 100.00::3-109 PF02347::GDC-P 100.00::2-109 GO:0030170::pyridoxal phosphate binding confident rp_1wyu_A_1::8-44,46-109 very confident psy4854 555 P28337::Aminomethyltransferase, mitochondrial ::The glycine cleavage system catalyzes the degradation of glycine.::Gallus gallus (taxid: 9031) confident COG0404::GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] 100.00::193-532 PF01571::GCV_T 100.00::242-447 GO:0031405::lipoic acid binding confident hh_1wsr_A_1::193-226,228-339,343-473,475-488,490-533 very confident psy6089 313 P54378::Aminomethyltransferase ::The glycine cleavage system catalyzes the degradation of glycine.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG0404::GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] 100.00::35-313 PF01571::GCV_T 100.00::95-309 GO:0044464::cell part confident hh_2gag_A_1::68-107,110-229,231-313 very confident psy12858 131 Q8NCN5::Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial ::Decreases the sensitivity of PDP1 to magnesium ions, and this inhibition is reversed by the polyamine spermine.::Homo sapiens (taxid: 9606) portable COG0404::GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] 99.94::5-122 PF08669::GCV_T_C 99.94::6-108 GO:0005739::mitochondrion confident hh_1pj5_A_1::5-36,42-79,88-108,110-122 very confident psy12057 172 P28337::Aminomethyltransferase, mitochondrial ::The glycine cleavage system catalyzes the degradation of glycine.::Gallus gallus (taxid: 9031) confident COG0404::GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism] 99.97::32-171 PF08669::GCV_T_C 99.93::68-160 GO:0044444::cytoplasmic part confident hh_1wsr_A_1::49-171 very confident psy11453 162 Q9I406::Gamma-glutamyltranspeptidase ::::Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) portable COG0405::Ggt Gamma-glutamyltransferase [Amino acid transport and metabolism] 100.00::2-159 PF01019::G_glu_transpept 100.00::11-158 GO:0005773::vacuole confident hh_2v36_A_1::2-105,107-145,147-158 very confident psy11446 150 Q9I406::Gamma-glutamyltranspeptidase ::::Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) portable COG0405::Ggt Gamma-glutamyltransferase [Amino acid transport and metabolism] 100.00::2-149 PF01019::G_glu_transpept 100.00::11-149 GO:0005773::vacuole confident hh_2v36_A_1::2-105,107-145,147-149 very confident psy11450 350 Q9I406::Gamma-glutamyltranspeptidase ::::Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) portable COG0405::Ggt Gamma-glutamyltransferase [Amino acid transport and metabolism] 100.00::6-348 PF01019::G_glu_transpept 100.00::5-348 GO:0005773::vacuole confident hh_2v36_A_1::8-17,19-88,90-135,138-138,143-143,145-147,150-169,172-174,176-206 very confident psy2709 295 B4EY52::Probable phosphoglycerate mutase GpmB ::::Proteus mirabilis (strain HI4320) (taxid: 529507) portable COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 100.00::35-212 PF00300::His_Phos_1 99.95::38-168 GO:0005829::cytosol confident hh_1bif_A_1::2-168,187-197,201-212,221-222,229-280 very confident psy18151 204 Q5R9C1::6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 ::Synthesis and degradation of fructose 2,6-bisphosphate.::Pongo abelii (taxid: 9601) portable COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 100.00::40-202 PF00300::His_Phos_1 99.97::42-192 GO:0005829::cytosol confident hh_2axn_A_1::7-31,40-66,68-76,82-94,96-103,108-176,178-202 very confident psy13009 515 Q562B5::Serine/threonine-protein phosphatase PGAM5, mitochondrial ::Displays phosphatase activity for serine/threonine residues, and, dephosphorylates and activates MAP3K5 kinase. Has apparently no phosphoglycerate mutase activity. May be regulator of mitochondrial dynamics. Substrate for a KEAP1-dependent ubiquitin ligase complex. Contributes to the repression of NFE2L2-dependent gene expression.::Rattus norvegicus (taxid: 10116) portable COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 99.98::37-248 PF00300::His_Phos_1 99.93::40-217 GO:0090141::positive regulation of mitochondrial fission confident hh_3mxo_A_1::31-117,121-121,125-127,141-142,164-268 very confident psy6921 256 P11117::Lysosomal acid phosphatase ::::Homo sapiens (taxid: 9606) portable COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 96.88::26-118 PF00328::His_Phos_2 100.00::22-255 GO:0043229::intracellular organelle confident hh_3it3_A_1::21-37,40-47,53-54,56-128,131-143,145-149,151-152,154-255 very confident psy141 399 P11117::Lysosomal acid phosphatase ::::Homo sapiens (taxid: 9606) portable COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 96.17::131-225 PF00328::His_Phos_2 100.00::127-394 GO:0043229::intracellular organelle confident hh_3it3_A_1::126-143,148-155,160-160,162-162,164-234,237-250,252-257,259-259,261-367,369-398 very confident psy6474 381 P20611::Lysosomal acid phosphatase ::::Rattus norvegicus (taxid: 10116) confident COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 96.60::34-120 PF00328::His_Phos_2 100.00::30-325 GO:0045177::apical part of cell confident hh_3it3_A_1::28-53,57-58,60-145,147-152,154-154,156-314,316-326,332-357 very confident psy16945 395 Q10944::Putative acid phosphatase 5 ::::Caenorhabditis elegans (taxid: 6239) confident COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 96.18::6-92 PF00328::His_Phos_2 100.00::2-297 GO:0045177::apical part of cell confident hh_3it3_A_1::1-26,30-30,32-117,119-122,124-126,128-244,246-299,306-331 very confident psy9912 366 P70265::6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 ::Synthesis and degradation of fructose 2,6-bisphosphate.::Mus musculus (taxid: 10090) confident COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 100.00::149-331 PF01591::6PF2K 100.00::2-150 GO:0003873::6-phosphofructo-2-kinase activity very confident hh_2axn_A_1::3-44,46-352 very confident psy673 512 Q5R9C1::6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 ::Synthesis and degradation of fructose 2,6-bisphosphate.::Pongo abelii (taxid: 9601) confident COG0406::phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] 100.00::295-476 PF01591::6PF2K 100.00::31-296 GO:0003873::6-phosphofructo-2-kinase activity confident hh_2axn_A_1::31-81,136-192,194-430,432-496 very confident psy15359 281 Q54DF9::Uroporphyrinogen decarboxylase ::Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.::Dictyostelium discoideum (taxid: 44689) confident COG0407::HemE Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] 100.00::14-280 PF01208::URO-D 100.00::15-280 GO:0005829::cytosol confident hh_3cyv_A_1::11-123,125-250,255-280 very confident psy10925 214 Q54DF9::Uroporphyrinogen decarboxylase ::Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.::Dictyostelium discoideum (taxid: 44689) confident COG0407::HemE Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] 100.00::15-206 PF01208::URO-D 100.00::12-205 GO:0015630::microtubule cytoskeleton confident hh_4exq_A_1::10-122,124-205 very confident psy15360 109 Q9PTS2::Uroporphyrinogen decarboxylase ::Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.::Danio rerio (taxid: 7955) confident COG0407::HemE Uroporphyrinogen-III decarboxylase [Coenzyme metabolism] 100.00::3-109 PF01208::URO-D 99.96::4-108 GO:0046502::uroporphyrinogen III metabolic process confident hh_4exq_A_1::4-109 very confident psy3461 87 Q9V3D2::Coproporphyrinogen-III oxidase ::Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III.::Drosophila melanogaster (taxid: 7227) confident COG0408::HemF Coproporphyrinogen III oxidase [Coenzyme metabolism] 100.00::2-87 PF01218::Coprogen_oxidas 100.00::3-87 GO:0005829::cytosol confident hh_2aex_A_1::3-87 very confident psy6650 156 P97784::Cryptochrome-1 ::Blue light-dependent regulator of the circadian feedback loop. Inhibits CLOCK|NPAS2-ARNTL E box-mediated transcription. Acts, in conjunction with CRY2, in maintaining period length and circadian rhythmicity. Has no photolyase activity. Capable of translocating circadian clock core proteins such as PER proteins to the nucleus. May inhibit CLOCK|NPAS2-ARNTL transcriptional activity through stabilizing the unphosphorylated form of ARNTL.::Mus musculus (taxid: 10090) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 100.00::15-156 PF00875::DNA_photolyase 100.00::17-156 GO:0003690::double-stranded DNA binding confident hh_1np7_A_1::15-155 very confident psy6305 52 Q293P8::Cryptochrome-1 ::Blue light-dependent regulator that is the input of the circadian feedback loop. Has no photolyase activity for cyclobutane pyrimidine dimers or 6-4 photoproducts. Regulation of expression by light suggests a role in photoreception for locomotor activity rhythms. Light induces the degradation of cry, likely due to conformational change in the photoreceptor leading to targeting to the proteasome. Under circadian regulation, expression is influenced by the clock pacemaker genes period, timeless, Clock and cycle. Binding to tim irreversibly commits tim to proteasomal degradation. Functions, together with per, as a transcriptional repressor required for the oscillation of peripheral circadian clocks and for the correct specification of clock cells. Genes directly activated by the transcription factors Clock (Clk) and cycle (cyc) are repressed by cry. Necessary for light-dependent magnetosensitivity, an intact circadian system is not required for the magnetoreception mechanism to operate. Required for both the naive and trained responses to magnetic field, consistent with the notion that Cry is in the input pathway of magnetic sensing.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 99.36::11-50 PF00875::DNA_photolyase 99.66::13-48 GO:0003690::double-stranded DNA binding confident hh_3fy4_A_1::11-50 very confident psy9352 146 Q49AN0::Cryptochrome-2 ::Blue light-dependent regulator of the circadian feedback loop. Inhibits CLOCK|NPAS2-ARNTL E box-mediated transcription. Acts, in conjunction with CRY2, in maintaining period length and circadian rhythmicity. Has no photolyase activity. Capable of translocating circadian clock core proteins such as PER proteins to the nucleus. May inhibit CLOCK|NPAS2-ARNTL transcriptional activity through stabilizing the unphosphorylated form of ARNTL.::Homo sapiens (taxid: 9606) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 99.98::6-145 PF00875::DNA_photolyase 100.00::8-145 GO:0005634::nucleus confident hh_3fy4_A_1::1-2,4-33,40-145 very confident psy17626 184 Q293P8::Cryptochrome-1 ::Blue light-dependent regulator that is the input of the circadian feedback loop. Has no photolyase activity for cyclobutane pyrimidine dimers or 6-4 photoproducts. Regulation of expression by light suggests a role in photoreception for locomotor activity rhythms. Light induces the degradation of cry, likely due to conformational change in the photoreceptor leading to targeting to the proteasome. Under circadian regulation, expression is influenced by the clock pacemaker genes period, timeless, Clock and cycle. Binding to tim irreversibly commits tim to proteasomal degradation. Functions, together with per, as a transcriptional repressor required for the oscillation of peripheral circadian clocks and for the correct specification of clock cells. Genes directly activated by the transcription factors Clock (Clk) and cycle (cyc) are repressed by cry. Necessary for light-dependent magnetosensitivity, an intact circadian system is not required for the magnetoreception mechanism to operate. Required for both the naive and trained responses to magnetic field, consistent with the notion that Cry is in the input pathway of magnetic sensing.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 99.87::7-123 PF00875::DNA_photolyase 99.95::7-123 GO:0005737::cytoplasm confident hh_3fy4_A_1::4-122 very confident psy15173 131 Q9SB00::Deoxyribodipyrimidine photo-lyase ::Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutylpyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Required for plant survival in the presence of UV-B light. Not involved in the repair of (6-4) photoproducts.::Arabidopsis thaliana (taxid: 3702) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 99.30::3-64 PF00875::DNA_photolyase 99.08::3-65 GO:0006281::DNA repair confident hh_3umv_A_1::3-30,32-131 very confident psy4171 309 P97784::Cryptochrome-1 ::Blue light-dependent regulator of the circadian feedback loop. Inhibits CLOCK|NPAS2-ARNTL E box-mediated transcription. Acts, in conjunction with CRY2, in maintaining period length and circadian rhythmicity. Has no photolyase activity. Capable of translocating circadian clock core proteins such as PER proteins to the nucleus. May inhibit CLOCK|NPAS2-ARNTL transcriptional activity through stabilizing the unphosphorylated form of ARNTL.::Mus musculus (taxid: 10090) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 100.00::1-309 PF03441::FAD_binding_7 100.00::93-309 GO:0003690::double-stranded DNA binding confident hh_3fy4_A_1::1-51,54-60,62-63,66-309 very confident psy6304 407 Q293P8::Cryptochrome-1 ::Blue light-dependent regulator that is the input of the circadian feedback loop. Has no photolyase activity for cyclobutane pyrimidine dimers or 6-4 photoproducts. Regulation of expression by light suggests a role in photoreception for locomotor activity rhythms. Light induces the degradation of cry, likely due to conformational change in the photoreceptor leading to targeting to the proteasome. Under circadian regulation, expression is influenced by the clock pacemaker genes period, timeless, Clock and cycle. Binding to tim irreversibly commits tim to proteasomal degradation. Functions, together with per, as a transcriptional repressor required for the oscillation of peripheral circadian clocks and for the correct specification of clock cells. Genes directly activated by the transcription factors Clock (Clk) and cycle (cyc) are repressed by cry. Necessary for light-dependent magnetosensitivity, an intact circadian system is not required for the magnetoreception mechanism to operate. Required for both the naive and trained responses to magnetic field, consistent with the notion that Cry is in the input pathway of magnetic sensing.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 100.00::7-379 PF03441::FAD_binding_7 100.00::151-379 GO:0005634::nucleus confident hh_1owl_A_1::5-82,86-96,98-106,109-116,118-125,127-140,144-144,146-146,148-164,167-168,171-182,184-184,186-219,221-264,270-299,301-343,348-349,354-354,356-382 very confident psy14494 470 P25078::Deoxyribodipyrimidine photo-lyase ::Involved in repair of UV radiation-induced DNA damage. Catalyzes the light-dependent monomerization (300-600 nm) of cyclobutyl pyrimidine dimers (in cis-syn configuration), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation.::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 100.00::3-464 PF03441::FAD_binding_7 100.00::189-464 GO:0006281::DNA repair confident hh_1owl_A_1::2-19,24-137,139-139,144-164,166-182,184-184,186-297,301-384,386-427,432-435,441-465 very confident psy11420 315 P97784::Cryptochrome-1 ::Blue light-dependent regulator of the circadian feedback loop. Inhibits CLOCK|NPAS2-ARNTL E box-mediated transcription. Acts, in conjunction with CRY2, in maintaining period length and circadian rhythmicity. Has no photolyase activity. Capable of translocating circadian clock core proteins such as PER proteins to the nucleus. May inhibit CLOCK|NPAS2-ARNTL transcriptional activity through stabilizing the unphosphorylated form of ARNTL.::Mus musculus (taxid: 10090) confident COG0415::PhrB Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair] 100.00::2-287 PF03441::FAD_binding_7 100.00::61-287 GO:0009416::response to light stimulus confident hh_3fy4_A_1::1-31,33-279,281-287 very confident psy6283 1030 P26019::DNA polymerase alpha catalytic subunit ::Polymerase alpha in a complex with DNA primase is a replicative polymerase. In addition to polymerase activity, this DNA polymerase exhibits 3' to 5' exonuclease activity.::Drosophila melanogaster (taxid: 7227) confident COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 100.00::402-821 PF00136::DNA_pol_B 100.00::447-818 GO:0005634::nucleus confident no hit no match psy5921 1200 O60673::DNA polymerase zeta catalytic subunit ::Interacts with MAD2L2 to form the error prone DNA polymerase zeta involved in translesion DNA synthesis.::Homo sapiens (taxid: 9606) confident COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 100.00::379-1076 PF00136::DNA_pol_B 100.00::623-1073 GO:0006281::DNA repair confident hh_2gv9_A_1::327-338,340-436,438-497,499-574,576-707,720-723,729-772,775-803,805-906,913-987,989-1003,1005-1040,1042-1053,1055-1069 very confident psy12450 168 P52431::DNA polymerase delta catalytic subunit ::Possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction. Required with its accessory proteins (proliferating cell nuclear antigen (PCNA) and replication factor C (RFC) or activator 1) for leading strand synthesis. Also involved in completing Okazaki fragments initiated by the DNA polymerase alpha/primase complex.::Mus musculus (taxid: 10090) confident COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 99.95::41-167 PF00136::DNA_pol_B 99.95::41-166 GO:0006287::base-excision repair, gap-filling confident hh_3iay_A_1::2-34,36-167 very confident psy1361 1274 P09884::DNA polymerase alpha catalytic subunit ::Plays an essential role in the initiation of DNA replication. During the S phase of the cell cycle, the DNA polymerase alpha complex (composed of a catalytic subunit POLA1/p180, a regulatory subunit POLA2/p70 and two primase subunits PRIM1/p49 and PRIM2/p58) is recruited to DNA at the replicative forks via direct interactions with MCM10 and WDHD1. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. These primers are initially extended by the polymerase alpha catalytic subunit and subsequently transferred to polymerase delta and polymerase epsilon for processive synthesis on the lagging and leading strand, respectively. The reason this transfer occurs is because the polymerase alpha has limited processivity and lacks intrinsic 3' exonuclease activity for proofreading error, and therefore is not well suited for replicating long complexes.::Homo sapiens (taxid: 9606) confident COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 100.00::560-1017 PF00136::DNA_pol_B 100.00::577-1032 GO:0031981::nuclear lumen confident hh_2gv9_A_1::561-714,717-842,847-849,854-886,892-936,938-987,989-1001,1003-1019 very confident psy12447 551 O48901::DNA polymerase delta catalytic subunit ::This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.::Glycine max (taxid: 3847) portable COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 99.97::50-550 PF03104::DNA_pol_B_exo1 100.00::59-509 GO:0008296::3'-5'-exodeoxyribonuclease activity confident hh_3iay_A_1::4-37,41-43,46-101,113-158,160-192,200-215,231-284,333-416,465-551 very confident psy5925 696 O60673::DNA polymerase zeta catalytic subunit ::Interacts with MAD2L2 to form the error prone DNA polymerase zeta involved in translesion DNA synthesis.::Homo sapiens (taxid: 9606) portable COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 100.00::240-692 PF03104::DNA_pol_B_exo1 99.95::190-451 GO:0043229::intracellular organelle confident hh_2gv9_A_1::222-283,286-299,305-305,316-323,327-329,344-399,401-476,478-608,619-620,623-625,631-674,677-692 very confident psy5919 387 O60673::DNA polymerase zeta catalytic subunit ::Interacts with MAD2L2 to form the error prone DNA polymerase zeta involved in translesion DNA synthesis.::Homo sapiens (taxid: 9606) portable COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 98.89::85-230 PF13901::DUF4206 99.93::242-387 GO:0016035::zeta DNA polymerase complex confident hh_3iay_A_1::85-124,126-136,141-142,148-204,206-238,241-258 very confident psy12448 168 P30316::DNA polymerase delta catalytic subunit ::This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 98.15::1-46 PF14260::zf-C4pol 99.87::75-149 GO:0006287::base-excision repair, gap-filling confident hh_2gv9_A_1::1-24,26-40 confident psy12449 102 P90829::DNA polymerase delta catalytic subunit ::Possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction. Required with its accessory proteins (proliferating cell nuclear antigen (PCNA) and replication factor C (RFC) or activator 1) for leading strand synthesis. Also involved in completing Okazaki fragments initiated by the DNA polymerase alpha/primase complex.::Caenorhabditis elegans (taxid: 6239) confident COG0417::PolB DNA polymerase elongation subunit (family B) [DNA replication, recombination, and repair] 98.64::4-62 PF14260::zf-C4pol 99.44::46-81 GO:0006287::base-excision repair, gap-filling confident bp_3iay_A_1::3-13,16-99 very confident psy11941 313 Q23255::Double-strand break repair protein mre-11 ::Required for meiotic crossing over and chiasma formation. Pachytene morphology and homolog pairing are normal. Vital in long term for maintenance of reproductive capacity of subsequent generations.::Caenorhabditis elegans (taxid: 6239) portable COG0420::SbcD DNA repair exonuclease [DNA replication, recombination, and repair] 99.98::22-309 PF12850::Metallophos_2 99.71::22-297 GO:0016233::telomere capping confident hh_4fbw_A_1::16-313 very confident psy4593 132 Q09741::Spermidine synthase ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0421::SpeE Spermidine synthase [Amino acid transport and metabolism] 99.96::6-124 PF01564::Spermine_synth 99.96::4-120 GO:0005576::extracellular region confident hh_1xj5_A_1::4-38,42-118 very confident psy4592 197 Q09741::Spermidine synthase ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0421::SpeE Spermidine synthase [Amino acid transport and metabolism] 100.00::2-196 PF01564::Spermine_synth 100.00::2-196 GO:0005829::cytosol confident hh_1iy9_A_1::2-196 very confident psy4594 82 Q12455::Spermine synthase ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0421::SpeE Spermidine synthase [Amino acid transport and metabolism] 99.93::7-80 PF01564::Spermine_synth 99.94::8-80 GO:0042803::protein homodimerization activity confident hh_1xj5_A_1::7-80 very confident psy17941 679 P41250::Glycine--tRNA ligase ::Catalyzes the attachment of glycine to tRNA(Gly). Is also able produce diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs.::Homo sapiens (taxid: 9606) very confident COG0423::GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] 100.00::65-662 PF00587::tRNA-synt_2b 99.95::103-399 GO:0045335::phagocytic vesicle very confident hh_2zt5_A_1::1-319,321-625,627-678 very confident psy14704 162 C4ZDP0::Maf-like protein EUBREC_3290 ::::Eubacterium rectale (strain ATCC 33656 / VPI 0990) (taxid: 515619) confident COG0424::Maf Nucleotide-binding protein implicated in inhibition of septum formation [Cell division and chromosome partitioning] 100.00::11-162 PF02545::Maf 100.00::12-162 GO:0005737::cytoplasm confident hh_2p5x_A_1::9-42,44-52,54-162 very confident psy11853 61 P38942::4-hydroxybutyrate coenzyme A transferase ::::Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) (taxid: 431943) portable COG0427::ACH1 Acetyl-CoA hydrolase [Energy production and conversion] 98.86::8-61 PF02550::AcetylCoA_hydro 99.78::3-61 GO:0005811::lipid particle confident hh_3d3u_A_1::2-61 very confident psy2323 509 P38942::4-hydroxybutyrate coenzyme A transferase ::::Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) (taxid: 431943) confident COG0427::ACH1 Acetyl-CoA hydrolase [Energy production and conversion] 100.00::1-500 PF13336::AcetylCoA_hyd_C 100.00::339-494 GO:0005811::lipid particle confident hh_3gk7_A_1::1-10,14-14,17-53,56-182,223-231,252-270,272-429,431-502 very confident psy11854 141 P38942::4-hydroxybutyrate coenzyme A transferase ::::Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) (taxid: 431943) portable COG0427::ACH1 Acetyl-CoA hydrolase [Energy production and conversion] 99.93::87-139 PF13336::AcetylCoA_hyd_C 99.90::82-136 GO:0005811::lipid particle confident hh_2oas_A_1::4-141 very confident psy7218 93 P38942::4-hydroxybutyrate coenzyme A transferase ::::Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) (taxid: 431943) confident COG0427::ACH1 Acetyl-CoA hydrolase [Energy production and conversion] 99.96::11-89 PF13336::AcetylCoA_hyd_C 99.97::13-83 GO:0005811::lipid particle confident rp_2oas_A_1::33-89 very confident psy2324 170 Q6FPF3::Acetyl-CoA hydrolase ::Presumably involved in regulating the intracellular acetyl-CoA pool for fatty acid and cholesterol synthesis and fatty acid oxidation.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) portable COG0427::ACH1 Acetyl-CoA hydrolase [Energy production and conversion] 100.00::1-170 PF13336::AcetylCoA_hyd_C 100.00::55-170 GO:0005811::lipid particle confident hh_3gk7_A_1::2-170 very confident psy5905 371 A4IIC5::Zinc transporter ZIP3 ::Acts as a zinc-influx transporter.::Xenopus tropicalis (taxid: 8364) confident COG0428::Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] 99.93::42-327 PF02535::Zip 100.00::42-329 GO:0008270::zinc ion binding confident no hit no match psy14284 149 Q9VAF0::Uncharacterized protein CG7816 ::::Drosophila melanogaster (taxid: 7227) portable COG0428::Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] 99.61::19-149 PF02535::Zip 99.02::21-149 GO:0044444::cytoplasmic part confident no hit no match psy3850 215 P80035::Gastric triacylglycerol lipase ::::Canis familiaris (taxid: 9615) portable COG0429::Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] 94.77::10-114 PF00561::Abhydrolase_1 97.58::29-100 GO:0043229::intracellular organelle confident hh_1k8q_A_1::3-77,80-113 very confident psy1426 64 Q9CPP7::Gastric triacylglycerol lipase ::::Mus musculus (taxid: 10090) portable COG0429::Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only] 90.28::12-52 PF04083::Abhydro_lipase 99.97::3-57 GO:0052689::carboxylic ester hydrolase activity confident hh_1k8q_A_1::1-58 very confident psy13192 401 Q9Y2P8::RNA 3'-terminal phosphate cyclase-like protein ::Does not have cyclase activity. Plays a role in 40S-ribosomal-subunit biogenesis in the early pre-rRNA processing steps at sites A0, A1 and A2 that are required for proper maturation of the 18S RNA.::Homo sapiens (taxid: 9606) confident COG0430::RCL1 RNA 3'-terminal phosphate cyclase [RNA processing and modification] 100.00::2-312 PF01137::RTC 100.00::2-312 GO:0005730::nucleolus confident hh_3pqv_A_1::2-116,119-234,239-320,323-334 very confident psy2632 374 A0B532::RNA 3'-terminal phosphate cyclase ::Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.::Methanosaeta thermophila (strain DSM 6194 / PT) (taxid: 349307) confident COG0430::RCL1 RNA 3'-terminal phosphate cyclase [RNA processing and modification] 100.00::9-356 PF01137::RTC 100.00::13-348 GO:0045335::phagocytic vesicle confident hh_3tut_A_1::7-159,162-206,208-222,227-232,235-241,246-264,266-315,317-351,353-358 very confident psy13017 74 O14155::UPF0047 protein C4A8.02c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0432::Uncharacterized conserved protein [Function unknown] 99.93::2-53 PF01894::UPF0047 99.94::2-52 GO:0005829::cytosol confident hh_1vmh_A_1::2-39,41-52 very confident psy9039 251 O29828::Uncharacterized protein AF_0419 ::::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) confident COG0434::SgcQ Predicted TIM-barrel enzyme [General function prediction only] 100.00::7-250 PF03437::BtpA 100.00::7-250 GO:0003824::catalytic activity confident hh_3nav_A_1::13-20,23-34,43-50,52-55,60-90,93-103,105-110,116-122,127-158,167-167,169-245 very confident psy8000 328 Q8K2Q2::Glutathione S-transferase omega-2 ::Exhibits glutathione-dependent thiol transferase activity. Has high dehydroascorbate reductase activity and may contribute to the recycling of ascorbic acid. Participates in the biotransformation of inorganic arsenic and reduces monomethylarsonic acid (MMA).::Mus musculus (taxid: 10090) portable COG0435::ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.97::92-317 PF13417::GST_N_3 99.76::128-201 GO:0016782::transferase activity, transferring sulfur-containing groups confident hh_3rbt_A_1::107-115,117-118,122-201,203-210,212-241,244-327 very confident psy788 126 Q71RI9::Kynurenine--oxoglutarate transaminase 3 ::Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).::Mus musculus (taxid: 10090) portable COG0436::Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 99.83::2-124 PF00155::Aminotran_1_2 99.47::8-118 GO:0005634::nucleus confident hh_1yiz_A_1::7-124 very confident psy790 72 Q71RI9::Kynurenine--oxoglutarate transaminase 3 ::Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).::Mus musculus (taxid: 10090) confident COG0436::Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 99.54::2-72 PF00155::Aminotran_1_2 99.10::2-71 GO:0005730::nucleolus confident hh_1v2d_A_1::3-17,30-71 very confident psy782 100 Q71RI9::Kynurenine--oxoglutarate transaminase 3 ::Catalyzes the irreversible transamination of the L-tryptophan metabolite L-kynurenine to form kynurenic acid (KA). May catalyze the beta-elimination of S-conjugates and Se-conjugates of L-(seleno)cysteine, resulting in the cleavage of the C-S or C-Se bond (By similarity). Has transaminase activity towards L-kynurenine, tryptophan, phenylalanine, serine, cysteine, methionine, histidine, glutamine and asparagine with glyoxylate as an amino group acceptor (in vitro). Has lower activity with 2-oxoglutarate as amino group acceptor (in vitro).::Mus musculus (taxid: 10090) portable COG0436::Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 99.49::32-100 PF00155::Aminotran_1_2 98.45::33-97 GO:0005737::cytoplasm confident hh_1yiz_A_1::5-44,46-97 very confident psy13922 509 P24298::Alanine aminotransferase 1 ::Catalyzes the reversible transamination between alanine and 2-oxoglutarate to form pyruvate and glutamate. Participates in cellular nitrogen metabolism and also in liver gluconeogenesis starting with precursors transported from skeletal muscles.::Homo sapiens (taxid: 9606) confident COG0436::Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 100.00::21-504 PF00155::Aminotran_1_2 100.00::44-497 GO:0005773::vacuole confident hh_3tcm_A_1::4-101,106-277,312-418,466-469,478-509 very confident psy10612 426 Q9D0R2::Threonine--tRNA ligase, cytoplasmic ::::Mus musculus (taxid: 10090) confident COG0441::ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::24-422 PF00587::tRNA-synt_2b 99.97::57-206 GO:0004829::threonine-tRNA ligase activity confident hh_1qf6_A_1::25-103,105-356,358-423 very confident psy10609 715 Q9D0R2::Threonine--tRNA ligase, cytoplasmic ::::Mus musculus (taxid: 10090) confident COG0441::ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::136-699 PF00587::tRNA-synt_2b 99.96::466-626 GO:0005829::cytosol confident hh_3a32_A_1::424-447,452-696,698-699 very confident psy9574 783 A2S2N6::Threonine--tRNA ligase ::::Burkholderia mallei (strain NCTC 10229) (taxid: 412022) confident COG0441::ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::35-656 PF00587::tRNA-synt_2b 99.96::272-424 GO:0008144::drug binding confident hh_1qf6_A_1::1-609,633-654 very confident psy2360 136 Q9VUJ0::39S ribosomal protein L39, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0441::ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 97.94::76-134 PF02824::TGS 99.42::39-103 GO:0043231::intracellular membrane-bounded organelle confident hh_1wwt_A_1::37-43,47-84,86-110,114-121 very confident psy12008 458 Q9VUJ0::39S ribosomal protein L39, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0441::ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.95::2-198 PF02824::TGS 98.89::211-267 GO:0043231::intracellular membrane-bounded organelle confident hh_1nyr_A_1::210-222,224-248,250-273,277-298,300-303,308-314,316-324,329-382,386-431 very confident psy2359 137 Q9VUJ0::39S ribosomal protein L39, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG0441::ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.75::13-129 PF10752::DUF2533 90.62::77-113 GO:0043231::intracellular membrane-bounded organelle confident hh_1nyr_A_1::1-21,25-46,48-50,55-60,62-72,77-131 very confident psy5542 86 A8FDC1::Proline--tRNA ligase ::Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys-tRNA(Pro) is not edited by ProRS.::Bacillus pumilus (strain SAFR-032) (taxid: 315750) confident COG0442::ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.96::1-86 PF00587::tRNA-synt_2b 99.93::2-86 GO:0044444::cytoplasmic part confident hh_2i4l_A_1::2-86 very confident psy4514 64 Q63617::Hypoxia up-regulated protein 1 ::Has a pivotal role in cytoprotective cellular mechanisms triggered by oxygen deprivation. May play a role as a molecular chaperone and participate in protein folding.::Rattus norvegicus (taxid: 10116) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.78::1-63 PF00012::HSP70 99.74::1-63 GO:0005615::extracellular space confident hh_1dkg_D_1::1-18,20-62 confident psy7891 929 Q9JKR6::Hypoxia up-regulated protein 1 ::Has a pivotal role in cytoprotective cellular mechanisms triggered by oxygen deprivation. May play a role as a molecular chaperone and participate in protein folding.::Mus musculus (taxid: 10090) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::24-754 PF00012::HSP70 100.00::27-754 GO:0005615::extracellular space confident hh_1dkg_D_1::26-45,47-120,123-132,134-211,216-216,218-242,245-245,252-286,289-420 very confident psy8852 634 A3ML96::Chaperone protein HscA homolog ::Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.::Burkholderia mallei (strain NCTC 10247) (taxid: 320389) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::133-634 PF00012::HSP70 100.00::135-633 GO:0005794::Golgi apparatus confident hh_2kho_A_1::134-498,502-633 very confident psy7645 418 O97125::Heat shock protein 68 ::::Drosophila melanogaster (taxid: 7227) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::2-397 PF00012::HSP70 100.00::1-397 GO:0005794::Golgi apparatus very confident hh_3h0x_A_1::180-330 very confident psy5548 183 P11147::Heat shock 70 kDa protein cognate 4 ::::Drosophila melanogaster (taxid: 7227) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.97::7-182 PF00012::HSP70 100.00::7-182 GO:0005794::Golgi apparatus confident rp_1yuw_A_1::86-178 very confident psy3998 102 P17156::Heat shock-related 70 kDa protein 2 ::In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.::Mus musculus (taxid: 10090) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.76::1-102 PF00012::HSP70 99.90::1-102 GO:0005794::Golgi apparatus very confident hh_3i33_A_1::1-102 very confident psy6739 56 P19378::Heat shock cognate 71 kDa protein ::Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.::Cricetulus griseus (taxid: 10029) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.15::2-56 PF00012::HSP70 98.42::2-55 GO:0005794::Golgi apparatus very confident hh_1yuw_A_1::2-56 very confident psy5547 714 P19378::Heat shock cognate 71 kDa protein ::Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.::Cricetulus griseus (taxid: 10029) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::321-701 PF00012::HSP70 100.00::320-705 GO:0005794::Golgi apparatus very confident hh_3i33_A_1::321-399,403-596 very confident psy4399 379 P19378::Heat shock cognate 71 kDa protein ::Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.::Cricetulus griseus (taxid: 10029) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::1-375 PF00012::HSP70 100.00::1-322 GO:0005794::Golgi apparatus very confident hh_3i33_A_1::1-69,73-182,190-247,280-305 very confident psy3431 549 P22954::Probable mediator of RNA polymerase II transcription subunit 37c ::In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.::Arabidopsis thaliana (taxid: 3702) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::2-528 PF00012::HSP70 100.00::3-528 GO:0005794::Golgi apparatus very confident hh_3i33_A_1::1-212,214-300 very confident psy2902 945 Q21X09::Chaperone protein DnaK ::Acts as a chaperone.::Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) (taxid: 338969) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::71-643 PF00012::HSP70 100.00::73-642 GO:0005794::Golgi apparatus confident hh_1dkg_D_1::70-253,255-453 very confident psy4650 381 O55029::Coatomer subunit beta' ::This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner.::Mus musculus (taxid: 10090) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.64::239-365 PF00012::HSP70 99.58::2-356 GO:0005795::Golgi stack confident no hit no match psy7140 1304 Q5R606::Heat shock protein 105 kDa ::Prevents the aggregation of denatured proteins in cells under severe stress, on which the ATP levels decrease markedly. Inhibits HSPA8/HSC70 ATPase and chaperone activities.::Pongo abelii (taxid: 9601) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::560-1180 PF00012::HSP70 100.00::562-1180 GO:0005829::cytosol confident hh_1dkg_D_1::2-94,125-133,138-216,223-312,314-414 very confident psy18164 1212 Q9JKR6::Hypoxia up-regulated protein 1 ::Has a pivotal role in cytoprotective cellular mechanisms triggered by oxygen deprivation. May play a role as a molecular chaperone and participate in protein folding.::Mus musculus (taxid: 10090) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::283-1012 PF00012::HSP70 100.00::285-1011 GO:0005829::cytosol confident hh_1dkg_D_1::284-303,305-379,382-389,391-469,474-474,476-500,509-543,546-678 very confident psy7262 840 no hit no match COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::336-835 PF00012::HSP70 100.00::337-834 GO:0005829::cytosol confident hh_3i33_A_1::335-469,483-533,537-562,626-793 very confident psy471 211 O97125::Heat shock protein 68 ::::Drosophila melanogaster (taxid: 7227) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.95::14-155 PF00012::HSP70 99.91::49-156 GO:0005875::microtubule associated complex confident no hit no match psy3438 91 P17156::Heat shock-related 70 kDa protein 2 ::In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.::Mus musculus (taxid: 10090) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.54::2-79 PF00012::HSP70 99.55::3-56 GO:0005875::microtubule associated complex very confident bp_3i33_A_1::1-49 very confident psy3270 655 Q27975::Heat shock 70 kDa protein 1A ::In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.::Bos taurus (taxid: 9913) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::1-643 PF00012::HSP70 100.00::1-643 GO:0005875::microtubule associated complex very confident hh_3i33_A_1::1-92,175-247,249-415 very confident psy7639 2568 Q27975::Heat shock 70 kDa protein 1A ::In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.::Bos taurus (taxid: 9913) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::1987-2550 PF00012::HSP70 100.00::1985-2550 GO:0005875::microtubule associated complex very confident hh_3i33_A_1::1986-2154,2156-2322 very confident psy6737 130 P11147::Heat shock 70 kDa protein cognate 4 ::::Drosophila melanogaster (taxid: 7227) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 98.32::1-95 PF00012::HSP70 98.56::2-94 GO:0006986::response to unfolded protein confident hh_3lof_A_1::14-96 very confident psy6738 130 P11147::Heat shock 70 kDa protein cognate 4 ::::Drosophila melanogaster (taxid: 7227) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 98.32::1-95 PF00012::HSP70 98.56::2-94 GO:0006986::response to unfolded protein confident hh_3lof_A_1::14-96 very confident psy15349 80 P17156::Heat shock-related 70 kDa protein 2 ::In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.::Mus musculus (taxid: 10090) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 98.13::1-70 PF00012::HSP70 99.34::1-71 GO:0008180::signalosome very confident hh_3i33_A_1::1-71 very confident psy6736 1023 P19378::Heat shock cognate 71 kDa protein ::Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.::Cricetulus griseus (taxid: 10029) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::1-597 PF00012::HSP70 100.00::1-597 GO:0008180::signalosome very confident hh_1yuw_A_2::633-946,973-1022 very confident psy3918 668 Q3SW76::Chaperone protein DnaK ::Acts as a chaperone.::Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) (taxid: 323098) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::56-634 PF00012::HSP70 100.00::59-634 GO:0008180::signalosome confident hh_1dkg_D_1::58-160,162-373 very confident psy5911 1242 Q05FS8::Chaperone protein DnaK ::Acts as a chaperone.::Carsonella ruddii (strain PV) (taxid: 387662) very confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::644-1241 PF00012::HSP70 100.00::645-1242 GO:0009986::cell surface confident hh_1dkg_D_1::2-384 very confident psy3916 103 P0CS90::Heat shock protein SSC1, mitochondrial ::Acts as a non-catalytic component of endonuclease SceI (Endo.SceI), which cleaves specifically at multiple sites on mitochondrial DNA and produces double-stranded breaks. SSC1 confers broader sequence specificity, greater stability, and higher activity on the catalytic subunit.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.35::1-58 PF00012::HSP70 99.70::1-95 GO:0016887::ATPase activity confident hh_1dkg_D_1::2-95 very confident psy15216 2602 Q1H361::Cysteine desulfurase ::Catalyzes the removal of elemental sulfur from cysteine to produce alanine.::Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) (taxid: 265072) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::636-1143 PF00012::HSP70 100.00::639-1135 GO:0031071::cysteine desulfurase activity confident hh_3lvm_A_1::1-275,277-369 very confident psy17247 41 Q0VDF9::Heat shock 70 kDa protein 14 ::Component of the ribosome-associated complex (RAC), a complex involved in folding or maintaining nascent polypeptides in a folding-competent state. In the RAC complex, binds to the nascent polypeptide chain, while DNAJC2 stimulates its ATPase activity.::Homo sapiens (taxid: 9606) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.51::3-41 PF00012::HSP70 99.43::5-41 GO:0031090::organelle membrane confident hh_3i33_A_1::3-41 very confident psy4003 535 P08106::Heat shock 70 kDa protein ::::Gallus gallus (taxid: 9031) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::1-534 PF00012::HSP70 100.00::2-535 GO:0043227::membrane-bounded organelle confident hh_1yuw_A_1::2-13,15-128,196-297,368-489 very confident psy351 146 Q5ZLK7::Hypoxia up-regulated protein 1 ::Has a pivotal role in cytoprotective cellular mechanisms triggered by oxygen deprivation (By similarity). May play a role as a molecular chaperone and participate in protein folding.::Gallus gallus (taxid: 9031) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 99.73::28-103 PF00012::HSP70 99.87::31-146 GO:0043234::protein complex confident hh_1dkg_D_1::30-49,51-123,126-135,137-145 very confident psy740 763 Q6TMK3::Heat shock protein 88 ::May function in protein folding and assembly, and disassembly of protein complexes.::Dictyostelium discoideum (taxid: 44689) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 100.00::4-619 PF00012::HSP70 100.00::6-619 GO:0043234::protein complex confident hh_1dkg_D_1::4-106,109-109,112-224,226-327 very confident psy6083 74 P19378::Heat shock cognate 71 kDa protein ::Acts as a repressor of transcriptional activation. Inhibits the transcriptional coactivator activity of CITED1 on Smad-mediated transcription. Chaperone.::Cricetulus griseus (taxid: 10029) confident COG0443::DnaK Molecular chaperone [Posttranslational modification, protein turnover, chaperones] 98.73::1-74 PF00012::HSP70 99.58::1-73 GO:0045335::phagocytic vesicle very confident hh_3i33_A_1::1-73 very confident psy18239 97 Q91V24::ATP-binding cassette sub-family A member 7 ::Plays a role in phagocytosis by macrophages of apoptotic cells. Binds APOA1 and may function in apolipoprotein-mediated phospholipid efflux from cells. May also mediate cholesterol efflux. May regulate cellular ceramide homeostasis during keratinocytes differentiation.::Mus musculus (taxid: 10090) confident COG0444::DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] 99.04::5-62 no hit no match GO:0005794::Golgi apparatus confident hh_1vpl_A_1::7-57 confident psy13354 1342 A9M3R4::tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG ::NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.::Neisseria meningitidis serogroup C (strain 053442) (taxid: 374833) confident COG0445::GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] 100.00::760-1336 PF01134::GIDA 100.00::760-1105 GO:0015630::microtubule cytoskeleton confident hh_3n0l_A_1::7-379 very confident psy9395 637 A9M3R4::tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG ::NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.::Neisseria meningitidis serogroup C (strain 053442) (taxid: 374833) very confident COG0445::GidA Flavin-dependent tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA [Cell cycle control, cell division, chromosome partitioning] 100.00::5-630 PF01134::GIDA 100.00::8-400 GO:0030488::tRNA methylation confident hh_3ces_A_1::4-221,223-533,541-628 very confident psy1919 737 Q4KMC4::Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 ::Controls the flux of glucose into the hexosamine pathway. Most likely involved in regulating the availability of precursors for N- and O-linked glycosylation of proteins.::Rattus norvegicus (taxid: 10116) confident COG0449::GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] 100.00::2-727 PF01380::SIS 99.76::475-601 GO:0005829::cytosol confident hh_2poc_A_1::429-657,659-727 very confident psy1915 361 Q4KMC4::Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 ::Controls the flux of glucose into the hexosamine pathway. Most likely involved in regulating the availability of precursors for N- and O-linked glycosylation of proteins.::Rattus norvegicus (taxid: 10116) confident COG0449::GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] 100.00::44-361 PF01380::SIS 99.71::74-206 GO:0005829::cytosol confident hh_2poc_A_1::73-90,100-360 very confident psy1922 159 Q9W3V8::Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase ::Adds the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Glc(1)Man(9)GlcNAc(2)-PP-Dol.::Drosophila melanogaster (taxid: 7227) confident COG0449::GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane] 98.14::23-97 PF03155::Alg6_Alg8 99.75::72-159 GO:0000033::alpha-1,3-mannosyltransferase activity confident hh_1te5_A_1::29-39,42-63,72-72,82-85,87-96 portable psy11208 116 P30048::Thioredoxin-dependent peroxide reductase, mitochondrial ::Involved in redox regulation of the cell. Protects radical-sensitive enzymes from oxidative damage by a radical-generating system. Acts synergistically with MAP3K13 to regulate the activation of NF-kappa-B in the cytosol.::Homo sapiens (taxid: 9606) portable COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 99.97::1-113 PF00578::AhpC-TSA 98.53::14-59 GO:0005829::cytosol confident hh_3sbc_A_1::1-11,14-27,29-72,75-78,80-116 very confident psy13875 105 Q06830::Peroxiredoxin-1 ::Involved in redox regulation of the cell. Reduces peroxides with reducing equivalents provided through the thioredoxin system but not from glutaredoxin. May play an important role in eliminating peroxides generated during metabolism. Might participate in the signaling cascades of growth factors and tumor necrosis factor-alpha by regulating the intracellular concentrations of H(2)O(2). Reduces an intramolecular disulfide bond in GDPD5 that gates the ability to GDPD5 to drive postmitotic motor neuron differentiation.::Homo sapiens (taxid: 9606) confident COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 99.94::4-100 PF00578::AhpC-TSA 98.99::5-67 GO:0005829::cytosol confident rp_1qmv_A_1::19-96 very confident psy1172 276 Q5ZJF4::Peroxiredoxin-6 ::Involved in redox regulation of the cell. Can reduce H(2)O(2) and short chain organic, fatty acid, and phospholipid hydroperoxides. May play a role in the regulation of phospholipid turnover as well as in protection against oxidative injury.::Gallus gallus (taxid: 9031) confident COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::1-121 PF00578::AhpC-TSA 99.86::155-267 GO:0005829::cytosol confident bp_2v2g_A_1::17-120 very confident psy13814 75 Q5ZJF4::Peroxiredoxin-6 ::Involved in redox regulation of the cell. Can reduce H(2)O(2) and short chain organic, fatty acid, and phospholipid hydroperoxides. May play a role in the regulation of phospholipid turnover as well as in protection against oxidative injury.::Gallus gallus (taxid: 9031) confident COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 99.82::3-75 PF00578::AhpC-TSA 98.97::3-63 GO:0005829::cytosol confident hh_2v2g_A_1::14-74 very confident psy17183 145 Q8K9W0::Probable peroxiredoxin ::::Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804) portable COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::1-145 PF00578::AhpC-TSA 99.66::1-99 GO:0005829::cytosol confident hh_3sbc_A_1::2-13,16-47,50-54,58-145 very confident psy16151 299 Q9BGI2::Peroxiredoxin-4 ::Probably involved in redox regulation of the cell. Regulates the activation of NF-kappa-B in the cytosol by a modulation of I-kappa-B-alpha phosphorylation.::Bos taurus (taxid: 9913) confident COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::64-233 PF00578::AhpC-TSA 99.95::67-200 GO:0005829::cytosol confident bp_2pn8_A_1::68-222 very confident psy2878 181 A0R1V9::Alkyl hydroperoxide reductase subunit C ::Together with AhpD, DltA and Lpd constitutes an NADH-dependent peroxidase active against hydrogen and alkyl peroxides as well as serving as a peroxynitrite reductase, thus protecting the bacterium against reactive nitrogen intermediates and oxidative stress generated by the host immune system. Does not however seem to play a role in detoxification of isoniazid.::Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196) confident COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::1-181 PF00578::AhpC-TSA 99.97::4-143 GO:0055114::oxidation-reduction process confident hh_2bmx_A_1::2-27,30-181 very confident psy15453 247 Q9BGI2::Peroxiredoxin-4 ::Probably involved in redox regulation of the cell. Regulates the activation of NF-kappa-B in the cytosol by a modulation of I-kappa-B-alpha phosphorylation.::Bos taurus (taxid: 9913) confident COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::52-246 PF08534::Redoxin 99.95::54-201 GO:0008284::positive regulation of cell proliferation very confident hh_3qpm_A_1::48-139,146-247 very confident psy1180 140 Q5ZJF4::Peroxiredoxin-6 ::Involved in redox regulation of the cell. Can reduce H(2)O(2) and short chain organic, fatty acid, and phospholipid hydroperoxides. May play a role in the regulation of phospholipid turnover as well as in protection against oxidative injury.::Gallus gallus (taxid: 9031) confident COG0450::AhpC Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::9-115 PF10417::1-cysPrx_C 99.59::81-121 GO:0005829::cytosol confident hh_2v2g_A_1::12-89,91-120,122-140 very confident psy7740 184 Q49B96::Cytochrome c oxidase assembly protein COX19 ::May be required for the assembly of mitochondrial cytochrome c oxidase.::Homo sapiens (taxid: 9606) confident COG0452::Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] 99.79::76-182 PF02441::Flavoprotein 99.86::77-182 GO:0005829::cytosol confident hh_1qzu_A_1::74-103,106-106,113-132,135-182 very confident psy14323 400 P40506::Phosphopantothenate--cysteine ligase CAB2 ::Catalyzes the first step in the biosynthesis of coenzyme A from vitamin B5, where cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0452::Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] 100.00::3-394 PF04127::DFP 100.00::140-361 GO:0004632::phosphopantothenate--cysteine ligase activity confident hh_1p9o_A_1::1-117,260-399 very confident psy7735 120 Q96CD2::Phosphopantothenoylcysteine decarboxylase ::Necessary for the biosynthesis of coenzyme A. Catalyzes the decarboxylation of 4-phosphopantothenoylcysteine to form 4'-phosphopantotheine.::Homo sapiens (taxid: 9606) confident COG0452::Dfp Phosphopantothenoylcysteine synthetase/decarboxylase [Coenzyme metabolism] 99.98::1-115 PF04127::DFP 99.48::83-115 GO:0005829::cytosol confident hh_1qzu_A_1::1-83 very confident psy3403 511 Q54MP9::N-alpha-acetyltransferase 30 ::Probable N-acetyltransferase.::Dictyostelium discoideum (taxid: 44689) confident COG0456::RimI Acetyltransferases [General function prediction only] 99.58::382-510 PF00583::Acetyltransf_1 99.55::424-505 GO:0005634::nucleus confident hh_2x7b_A_1::378-383,385-510 very confident psy16746 247 Q9H7X0::N-alpha-acetyltransferase 60 ::Histone acetyltransferase localized in the Golgi apparatus that mediates acetylation of free histone H4, thereby facilitating nucleosome assembly. Has a preference for free histone H4 'Lys-20'(H4K20ac), 'Lys-79'(H4K79ac) and 'Lys-91' (H4K91ac). Also displays alpha (N-terminal) acetyltransferase activity towards a range of N-terminal sequences including those starting with Met-Lys, Met-Val, Met-Ala and Met-Met. Required for normal chromosomal segregation during anaphase.::Homo sapiens (taxid: 9606) confident COG0456::RimI Acetyltransferases [General function prediction only] 99.73::1-154 PF13420::Acetyltransf_4 99.77::1-162 GO:0006334::nucleosome assembly confident hh_2x7b_A_1::1-64,73-111,115-152,154-155,158-167 very confident psy9923 315 P48643::T-complex protein 1 subunit epsilon ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin.::Homo sapiens (taxid: 9606) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::1-307 PF00118::Cpn60_TCP1 100.00::1-308 GO:0005730::nucleolus very confident hh_3iyg_E_1::1-307 very confident psy14623 622 P48643::T-complex protein 1 subunit epsilon ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin.::Homo sapiens (taxid: 9606) very confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::27-588 PF00118::Cpn60_TCP1 100.00::46-585 GO:0005730::nucleolus very confident hh_3iyg_E_1::27-349,395-583 very confident psy14916 130 P12613::T-complex protein 1 subunit alpha ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.::Drosophila melanogaster (taxid: 7227) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 99.91::4-114 PF00118::Cpn60_TCP1 99.90::2-111 GO:0005794::Golgi apparatus confident hh_3iyg_A_1::2-111 very confident psy14917 407 P41988::T-complex protein 1 subunit alpha ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.::Caenorhabditis elegans (taxid: 6239) very confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::2-404 PF00118::Cpn60_TCP1 100.00::6-406 GO:0005794::Golgi apparatus very confident hh_3p9d_A_1::1-113,115-316,323-406 very confident psy2833 216 Q8SR76::T-complex protein 1 subunit gamma ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) portable COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 99.95::27-213 PF00118::Cpn60_TCP1 99.96::22-214 GO:0005832::chaperonin-containing T-complex confident hh_3p9d_G_1::7-19,24-150,154-162,165-170,173-191,193-213 very confident psy17074 632 Q99832::T-complex protein 1 subunit eta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.::Homo sapiens (taxid: 9606) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::334-632 PF00118::Cpn60_TCP1 100.00::354-631 GO:0005874::microtubule confident hh_3p9d_G_1::324-417,419-632 very confident psy9930 67 O02649::60 kDa heat shock protein, mitochondrial ::Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.::Drosophila melanogaster (taxid: 7227) very confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 99.00::1-43 PF00118::Cpn60_TCP1 98.61::2-40 GO:0005875::microtubule associated complex very confident hh_1iok_A_1::1-44,46-46,51-52,56-67 very confident psy14622 788 P63038::60 kDa heat shock protein, mitochondrial ::Implicated in mitochondrial protein import and macromolecular assembly. May facilitate the correct folding of imported proteins. May also prevent misfolding and promote the refolding and proper assembly of unfolded polypeptides generated under stress conditions in the mitochondrial matrix.::Mus musculus (taxid: 10090) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::6-786 PF00118::Cpn60_TCP1 100.00::7-786 GO:0005875::microtubule associated complex confident hh_1kp8_A_1::6-13,16-153,413-548,550-684,733-786 very confident psy8873 841 Q2T9X2::T-complex protein 1 subunit delta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin.::Bos taurus (taxid: 9913) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::361-840 PF00118::Cpn60_TCP1 100.00::312-841 GO:0005875::microtubule associated complex confident hh_3iyg_D_1::354-503,505-573,579-705,739-840 very confident psy16434 745 Q3ZCI9::T-complex protein 1 subunit theta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin.::Bos taurus (taxid: 9913) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::179-609 PF00118::Cpn60_TCP1 100.00::199-608 GO:0005875::microtubule associated complex confident hh_3iyg_Q_1::177-260,305-397,399-566,569-607 very confident psy17079 99 Q5ZJK8::T-complex protein 1 subunit eta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.::Gallus gallus (taxid: 9031) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 99.08::6-58 PF00118::Cpn60_TCP1 99.18::5-56 GO:0005875::microtubule associated complex confident hh_3iyg_H_1::3-55 very confident psy2834 137 P39077::T-complex protein 1 subunit gamma ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. In yeast may play a role in mitotic spindle formation.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 99.81::16-120 PF00118::Cpn60_TCP1 99.80::14-117 GO:0007339::binding of sperm to zona pellucida confident hh_3p9d_C_1::14-118 very confident psy2832 362 P49368::T-complex protein 1 subunit gamma ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin.::Homo sapiens (taxid: 9606) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::1-362 PF00118::Cpn60_TCP1 100.00::1-362 GO:0007339::binding of sperm to zona pellucida confident hh_3iyg_G_1::1-90,92-199,244-270,279-362 very confident psy17073 219 Q99832::T-complex protein 1 subunit eta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.::Homo sapiens (taxid: 9606) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::1-212 PF00118::Cpn60_TCP1 100.00::1-215 GO:0007339::binding of sperm to zona pellucida confident hh_3p9d_G_1::1-60,62-215 very confident psy2267 462 O02649::60 kDa heat shock protein, mitochondrial ::Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.::Drosophila melanogaster (taxid: 7227) very confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::21-455 PF00118::Cpn60_TCP1 100.00::42-412 GO:0042100::B cell proliferation very confident hh_3osx_A_1::209-323,325-354,396-439 very confident psy14945 629 Q3MHL7::T-complex protein 1 subunit zeta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.::Bos taurus (taxid: 9913) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::64-510 PF00118::Cpn60_TCP1 100.00::100-510 GO:0045335::phagocytic vesicle confident hh_3iyg_Z_1::109-133,135-135,143-207,217-240,249-259,263-265,267-270,275-275,280-338,340-462,464-510 very confident psy17549 418 Q5XIM9::T-complex protein 1 subunit beta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin.::Rattus norvegicus (taxid: 10116) very confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::55-413 PF00118::Cpn60_TCP1 100.00::74-413 GO:0072686::mitotic spindle very confident hh_3p9d_B_1::47-94,98-413 very confident psy6565 185 Q5XIM9::T-complex protein 1 subunit beta ::Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin.::Rattus norvegicus (taxid: 10116) confident COG0459::GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] 100.00::3-178 PF00118::Cpn60_TCP1 100.00::2-175 GO:0072686::mitotic spindle confident hh_3iyg_B_1::2-176 very confident psy1963 250 O58855::Orotate phosphoribosyltransferase ::Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).::Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (taxid: 70601) confident COG0461::PyrE Orotate phosphoribosyltransferase [Nucleotide transport and metabolism] 100.00::7-225 PF00156::Pribosyltran 99.80::42-175 GO:0072528::pyrimidine-containing compound biosynthetic process confident hh_2wns_A_1::8-106,129-227 very confident psy15570 84 Q63468::Phosphoribosyl pyrophosphate synthase-associated protein 1 ::Seems to play a negative regulatory role in 5-phosphoribose 1-diphosphate synthesis.::Rattus norvegicus (taxid: 10116) confident COG0462::PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] 99.81::5-82 PF14572::Pribosyl_synth 99.89::3-82 GO:0002189::ribose phosphate diphosphokinase complex confident hh_2ji4_A_1::16-82 very confident psy17482 353 P60892::Ribose-phosphate pyrophosphokinase 1 ::Catalyzes the synthesis of phosphoribosylpyrophosphate (PRPP) that is essential for nucleotide synthesis.::Rattus norvegicus (taxid: 10116) very confident COG0462::PrsA Phosphoribosylpyrophosphate synthetase [Nucleotide transport and metabolism / Amino acid transport and metabolism] 100.00::20-349 PF14572::Pribosyl_synth 100.00::196-349 GO:0004749::ribose phosphate diphosphokinase activity very confident hh_3s5j_B_1::20-36,38-113,138-353 very confident psy3172 157 Q6WV19::Polypeptide N-acetylgalactosaminyltransferase 2 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident COG0463::WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 99.79::66-157 PF00535::Glycos_transf_2 99.79::70-157 GO:0009312::oligosaccharide biosynthetic process confident hh_2ffu_A_1::4-157 very confident psy5323 110 Q6WV20::Polypeptide N-acetylgalactosaminyltransferase 1 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident COG0463::WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 99.64::14-109 PF00535::Glycos_transf_2 99.74::19-110 GO:0009312::oligosaccharide biosynthetic process confident hh_2d7i_A_1::13-63,65-67,69-110 very confident psy5328 76 Q8IXK2::Polypeptide N-acetylgalactosaminyltransferase 12 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has activity toward non-glycosylated peptides such as Muc5AC, Muc1a and EA2, and no detectable activity with Muc2 and Muc7. Displays enzymatic activity toward the Gal-NAc-Muc5AC glycopeptide, but no detectable activity to mono-GalNAc-glycosylated Muc1a, Muc2, Muc7 and EA2. May play an important role in the initial step of mucin-type oligosaccharide biosynthesis in digestive organs.::Homo sapiens (taxid: 9606) confident COG0463::WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 99.53::18-71 PF00535::Glycos_transf_2 99.14::22-71 GO:0009312::oligosaccharide biosynthetic process confident hh_2d7i_A_1::1-70 very confident psy12243 278 P58158::Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 ::Glycosaminoglycans biosynthesis. Involved in forming the linkage tetrasaccharide present in heparan sulfate and chondroitin sulfate. Transfers a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region trisaccharide Gal-beta-1,3-Gal-beta-1,4-Xyl covalently bound to a Ser residue at the glycosaminylglycan attachment site of proteoglycans. Can also play a role in the biosynthesis of l2/HNK-1 carbohydrate epitope on glycoproteins.::Mus musculus (taxid: 10090) confident COG0463::WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 96.68::33-148 PF03360::Glyco_transf_43 100.00::55-254 GO:0030204::chondroitin sulfate metabolic process confident hh_2d0j_A_1::32-105,108-229,231-263 very confident psy5326 157 Q29121::Polypeptide N-acetylgalactosaminyltransferase 1 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7.::Sus scrofa (taxid: 9823) portable COG0463::WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 92.99::94-132 no hit no match GO:1901576::organic substance biosynthetic process confident hh_2d7i_A_1::30-51,54-136 very confident psy450 478 Q8RY16::Peroxisome biogenesis protein 6 ::Involved in peroxisomal-targeting signal one (PTS1) and peroxisomal-targeting signal two (PTS2) protein import. Required for jasmonate biosynthesis. Necessary for the developmental elimination of obsolete peroxisome matix proteins. May form heteromeric AAA ATPase complexes required for the import of proteins. May be involved in PEX5 recycling.::Arabidopsis thaliana (taxid: 3702) confident COG0464::SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] 100.00::20-463 PF00004::AAA 99.87::237-369 GO:0005794::Golgi apparatus confident hh_3cf0_A_1::199-369,371-402,404-448,455-469 very confident psy3629 358 P54351::Vesicle-fusing ATPase 2 ::Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seem to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin.::Drosophila melanogaster (taxid: 7227) confident COG0464::SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] 100.00::1-357 PF00004::AAA 99.80::182-356 GO:0048172::regulation of short-term neuronal synaptic plasticity confident hh_1iy2_A_2::1-57,62-98,114-127 very confident psy12078 1419 O14325::Uncharacterized AAA domain-containing protein C16E9.10c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0464::SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] 100.00::442-999 PF01593::Amino_oxidase 99.88::1018-1407 GO:0005829::cytosol confident hh_2ce7_A_1::721-745,747-909,913-924,927-952,969-987 very confident psy5701 125 P55072::Transitional endoplasmic reticulum ATPase ::Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. Regulates E3 ubiquitin-protein ligase activity of RNF19A (By similarity). Component of the VCP/p97-AMFR/gp78 complex that participates in the final step of the sterol-mediated ubiquitination and endoplasmic reticulum-associated degradation (ERAD) of HMGCR.::Homo sapiens (taxid: 9606) confident COG0464::SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] 99.74::4-124 PF09336::Vps4_C 97.86::46-83 GO:0006200::ATP catabolic process very confident hh_3hu3_A_1::4-94 very confident psy3809 112 O75351::Vacuolar protein sorting-associated protein 4B ::Involved in late steps of the endosomal multivesicular bodies (MVB) pathway. Recognizes membrane-associated ESCRT-III assemblies and catalyzes their disassembly, possibly in combination with membrane fission. Redistributes the ESCRT-III components to the cytoplasm for further rounds of MVB sorting. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. In conjunction with the ESCRT machinery also appears to function in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis and enveloped virus budding (HIV-1 and other lentiviruses).::Homo sapiens (taxid: 9606) confident COG0464::SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] 98.89::1-104 PF09336::Vps4_C 99.92::48-109 GO:0033993::response to lipid confident hh_1xwi_A_1::1-112 very confident psy11009 863 P52917::Vacuolar protein sorting-associated protein 4 ::Involved in the transport of biosynthetic membrane proteins from the prevacuolar/endosomal compartment to the vacuole. Required for multivesicular body (MVB) protein sorting. Catalyzes the ATP-dependent dissociation of class E VPS proteins from endosomal membranes, such as the disassembly of the ESCRT-III complex.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0465::HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] 100.00::55-465 PF00004::AAA 99.73::745-863 GO:0000815::ESCRT III complex confident hh_2qp9_X_1::59-81,91-117,132-150,159-336 very confident psy10044 235 D1C1U7::ATP-dependent zinc metalloprotease FtsH 1 ::Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.::Sphaerobacter thermophilus (strain DSM 20745 / S 6022) (taxid: 479434) confident COG0465::HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] 100.00::3-232 PF00004::AAA 99.74::3-113 GO:0009941::chloroplast envelope confident hh_2ce7_A_1::4-220,223-233 very confident psy5435 245 P37476::ATP-dependent zinc metalloprotease FtsH ::In vitro partially degrades Spo0E, the phosphatase that acts on Spo0A-P. Recognition requires the last 14 residues of Spo0E.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG0465::HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] 99.85::55-214 PF01434::Peptidase_M41 99.85::65-224 GO:0005743::mitochondrial inner membrane confident hh_3ami_A_1::31-90,92-129,132-139,142-179,184-196,224-240 very confident psy5440 1036 Q9Y4W6::AFG3-like protein 2 ::ATP-dependent protease which is essential for axonal development.::Homo sapiens (taxid: 9606) confident COG0465::HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] 100.00::417-988 PF01434::Peptidase_M41 100.00::777-980 GO:0007528::neuromuscular junction development confident hh_1ixz_A_1::538-733,736-785 very confident psy14374 180 Q9FGM0::ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial ::Probable ATP-dependent zinc metallopeptidase. Involved in the assembly and/or stability of the complexes I and Involved in thermotolerance but not in high light stress resistance or in the assembly/stability of the complexes I and V of the mitochondrial oxidative phosphorylation system.::Arabidopsis thaliana (taxid: 3702) confident COG0465::HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] 99.91::1-113 PF01434::Peptidase_M41 99.96::1-111 GO:0043234::protein complex confident hh_2ce7_A_1::2-23,31-80,83-111 very confident psy10020 640 A6QBN8::ATP-dependent zinc metalloprotease FtsH ::Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins.::Sulfurovum sp. (strain NBC37-1) (taxid: 387093) portable COG0465::HflB ATP-dependent Zn proteases [Posttranslational modification, protein turnover, chaperones] 100.00::2-601 PF01434::Peptidase_M41 99.81::313-449 GO:0044424::intracellular part confident hh_2ce7_A_1::3-95,114-121,156-160,183-193,198-203,205-236,238-242,261-290,298-311,313-317,320-338,354-450,455-460,463-472,486-490,497-498,523-526,530-532,538-597 very confident psy17017 442 Q59HJ6::Lon protease homolog, mitochondrial ::ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial promoters and RNA in a single-stranded, site-specific, and strand-specific manner. May regulate mitochondrial DNA replication and/or gene expression using site-specific, single-stranded DNA binding to target the degradation of regulatory proteins binding to adjacent sites in mitochondrial promoters (By similarity). Endogenous substrates include oxidized aconitase.::Bos taurus (taxid: 9913) confident COG0466::Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] 100.00::83-442 PF02190::LON 99.96::83-343 GO:0070363::mitochondrial light strand promoter sense binding confident hh_3ljc_A_1::83-121,123-176,242-257,259-294,300-384 very confident psy5225 2847 Q89A99::Lon protease ::ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.::Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) (taxid: 224915) confident COG0466::Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] 100.00::348-935 PF02646::RmuC 100.00::1722-2023 GO:0043273::CTPase activity confident hh_1iy2_A_1::2384-2397,2399-2642 very confident psy8969 1230 Q6CNR9::Lon protease homolog, mitochondrial ::ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) confident COG0466::Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] 100.00::137-786 PF05362::Lon_C 100.00::601-785 GO:0004176::ATP-dependent peptidase activity confident hh_3m6a_A_1::277-632,634-675,686-784 very confident psy14616 174 Q2TBU9::RuvB-like 2 ::Plays an essential role in oncogenic transformation by MYC and also modulates transcriptional activation by the LEF1/TCF1-CTNNB1 complex. May also inhibit the transcriptional activity of ATF2.::Bos taurus (taxid: 9913) confident COG0466::Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] 99.92::2-169 PF05496::RuvB_N 99.86::1-160 GO:0031011::Ino80 complex confident hh_2c9o_A_1::1-90 very confident psy13674 315 Q14565::Meiotic recombination protein DMC1/LIM15 homolog ::May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks.::Homo sapiens (taxid: 9606) confident COG0468::RecA RecA/RadA recombinase [DNA replication, recombination, and repair] 100.00::115-314 PF08423::Rad51 100.00::135-314 GO:0000794::condensed nuclear chromosome confident hh_1v5w_A_1::70-200,202-221,223-315 very confident psy2198 279 C3N7M8::DNA repair and recombination protein RadA ::Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.::Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) (taxid: 439386) confident COG0468::RecA RecA/RadA recombinase [DNA replication, recombination, and repair] 99.96::10-237 PF08423::Rad51 100.00::39-237 GO:0005634::nucleus confident hh_3lda_A_1::5-114,116-237 very confident psy17736 99 Q2KJ94::DNA repair protein RAD51 homolog 1 ::Participates in a common DNA damage response pathway associated with the activation of homologous recombination and double-strand break repair. Binds to single and double stranded DNA and exhibits DNA-dependent ATPase activity. Underwinds duplex DNA and forms helical nucleoprotein filaments. Plays a role in regulating mitochondrial DNA copy number under conditions of oxidative stress in the presence of RAD51C and XRCC3.::Bos taurus (taxid: 9913) very confident COG0468::RecA RecA/RadA recombinase [DNA replication, recombination, and repair] 99.01::2-48 PF08423::Rad51 99.24::2-47 GO:0005635::nuclear envelope confident no hit no match psy259 398 P30614::Pyruvate kinase ::::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) confident COG0469::PykF Pyruvate kinase [Carbohydrate transport and metabolism] 100.00::106-388 PF00224::PK 100.00::106-253 GO:0005829::cytosol confident hh_1a3w_A_1::32-45,47-113,116-388 very confident psy257 157 P52480::Pyruvate kinase isozymes M1/M2 ::Glycolytic enzyme that catalyzes the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) to ADP, generating ATP. Stimulates POU5F1-mediated transcriptional activation.::Mus musculus (taxid: 10090) confident COG0469::PykF Pyruvate kinase [Carbohydrate transport and metabolism] 100.00::1-154 PF00224::PK 100.00::1-83 GO:0005829::cytosol confident hh_1a3w_A_1::1-151 very confident psy254 187 P52480::Pyruvate kinase isozymes M1/M2 ::Glycolytic enzyme that catalyzes the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) to ADP, generating ATP. Stimulates POU5F1-mediated transcriptional activation.::Mus musculus (taxid: 10090) confident COG0469::PykF Pyruvate kinase [Carbohydrate transport and metabolism] 100.00::32-185 PF00224::PK 100.00::34-184 GO:0005829::cytosol confident hh_1a3w_A_1::17-30,32-92,98-119,122-185 very confident psy6272 547 P53657::Pyruvate kinase isozymes R/L ::Plays a key role in glycolysis.::Mus musculus (taxid: 10090) confident COG0469::PykF Pyruvate kinase [Carbohydrate transport and metabolism] 100.00::50-544 PF00224::PK 100.00::52-409 GO:0005829::cytosol confident hh_1a3w_A_1::35-48,50-95,97-108,115-135,143-144,147-355,364-380,382-544 very confident psy255 70 O62619::Pyruvate kinase ::::Drosophila melanogaster (taxid: 7227) confident COG0469::PykF Pyruvate kinase [Carbohydrate transport and metabolism] 99.68::1-70 PF02887::PK_C 99.87::1-70 GO:0005829::cytosol confident hh_1a3w_A_1::1-70 very confident psy2304 85 Q8R323::Replication factor C subunit 3 ::The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1.::Mus musculus (taxid: 10090) confident COG0470::HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] 99.01::20-80 PF13177::DNA_pol3_delta2 98.06::20-80 GO:0016887::ATPase activity confident hh_1sxj_E_1::8-80 very confident psy3672 178 P41565::Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident COG0473::LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] 100.00::3-164 PF00180::Iso_dh 100.00::3-164 GO:0005739::mitochondrion confident hh_1w0d_A_1::3-40,42-82,105-149,153-164 very confident psy9334 65 O77784::Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial ::::Bos taurus (taxid: 9913) confident COG0473::LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] 99.96::4-65 PF00180::Iso_dh 99.94::1-65 GO:0005875::microtubule associated complex confident hh_3udu_A_1::3-65 very confident psy9338 130 O77784::Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial ::::Bos taurus (taxid: 9913) confident COG0473::LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] 100.00::5-130 PF00180::Iso_dh 100.00::5-125 GO:0005875::microtubule associated complex confident hh_2y3z_A_1::5-56,58-105,108-129 very confident psy9726 381 O94229::Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial ::Performs an essential role in the oxidative function of the citric acid cycle.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) very confident COG0473::LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] 100.00::71-379 PF00180::Iso_dh 100.00::74-380 GO:0005875::microtubule associated complex very confident hh_1hqs_A_1::43-57,72-143,147-331,333-380 very confident psy8787 364 Q93714::Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) very confident COG0473::LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] 100.00::42-364 PF00180::Iso_dh 100.00::45-361 GO:0005875::microtubule associated complex very confident hh_1hqs_A_1::17-26,28-31,35-35,39-39,42-56,58-91,94-342,344-364 very confident psy12309 152 P79089::Isocitrate dehydrogenase [NADP], mitochondrial ::::Aspergillus niger (taxid: 5061) confident COG0473::LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] 100.00::4-151 PF00180::Iso_dh 100.00::4-151 GO:0005886::plasma membrane very confident hh_1lwd_A_1::3-151 very confident psy559 376 P41565::Isocitrate dehydrogenase [NAD] subunit gamma 1, mitochondrial ::::Rattus norvegicus (taxid: 10116) very confident COG0473::LeuB Isocitrate/isopropylmalate dehydrogenase [Amino acid transport and metabolism] 100.00::42-367 PF00180::Iso_dh 100.00::45-361 GO:0006103::2-oxoglutarate metabolic process very confident hh_1hqs_A_1::42-122,124-290,292-341,343-366 very confident psy6866 961 Q5RDR3::Sodium/potassium-transporting ATPase subunit alpha-1 ::This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients.::Pongo abelii (taxid: 9601) very confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::113-923 PF00122::E1-E2_ATPase 100.00::208-438 GO:0005509::calcium ion binding confident hh_2zxe_A_1::103-591,593-955 very confident psy15803 1045 P98200::Probable phospholipid-transporting ATPase IB ::::Mus musculus (taxid: 10090) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::52-765 PF00122::E1-E2_ATPase 99.97::112-403 GO:0005548::phospholipid transporter activity confident hh_2zxe_A_1::52-68,73-183,188-210,249-267,269-327,333-333,343-378,389-444,447-447,452-490,493-560,565-593,595-646,648-684,688-712,714-716,718-727,729-763 very confident psy886 962 P22700::Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.::Drosophila melanogaster (taxid: 7227) very confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::40-961 PF00122::E1-E2_ATPase 100.00::229-464 GO:0005635::nuclear envelope confident hh_3ar4_A_1::40-87,91-144,146-153,268-628,630-903,906-961 very confident psy10301 1119 Q16720::Plasma membrane calcium-transporting ATPase 3 ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.::Homo sapiens (taxid: 9606) very confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::41-1006 PF00122::E1-E2_ATPase 100.00::133-411 GO:0005783::endoplasmic reticulum very confident hh_2zxe_A_1::36-55,58-115,120-162,165-268,306-340,350-354,363-513,517-561,563-577,579-609,615-696,705-735,741-948,951-1017 very confident psy2751 102 P06685::Sodium/potassium-transporting ATPase subunit alpha-1 ::This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients.::Rattus norvegicus (taxid: 10116) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.94::2-101 PF00122::E1-E2_ATPase 99.95::3-101 GO:0005794::Golgi apparatus confident hh_2zxe_A_1::2-101 very confident psy3624 1010 P06686::Sodium/potassium-transporting ATPase subunit alpha-2 ::This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients.::Rattus norvegicus (taxid: 10116) very confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::26-994 PF00122::E1-E2_ATPase 100.00::125-355 GO:0005890::sodium:potassium-exchanging ATPase complex very confident no hit no match psy5837 181 P98200::Probable phospholipid-transporting ATPase IB ::::Mus musculus (taxid: 10090) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.80::53-181 PF00122::E1-E2_ATPase 99.56::112-180 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2zxe_A_1::53-69,73-181 confident psy6097 167 Q12697::Vacuolar cation-transporting ATPase YPK9 ::Vacuolar transporter which plays a role in sequestration of divalent heavy metal ions.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.96::1-158 PF00122::E1-E2_ATPase 99.93::48-158 GO:0043231::intracellular membrane-bounded organelle confident hh_3b8c_A_1::1-83,85-103,105-137,140-158 very confident psy16230 292 Q12697::Vacuolar cation-transporting ATPase YPK9 ::Vacuolar transporter which plays a role in sequestration of divalent heavy metal ions.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.97::98-292 PF00122::E1-E2_ATPase 99.89::159-292 GO:0043231::intracellular membrane-bounded organelle confident hh_3b8c_A_1::90-194,196-214,216-252,267-278 very confident psy8121 285 Q16720::Plasma membrane calcium-transporting ATPase 3 ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.::Homo sapiens (taxid: 9606) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::37-283 PF00122::E1-E2_ATPase 99.97::133-283 GO:0045121::membrane raft confident hh_2zxe_A_1::36-55,58-115,120-163,166-283 very confident psy6019 93 P22700::Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.::Drosophila melanogaster (taxid: 7227) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.51::4-92 PF00122::E1-E2_ATPase 99.22::30-92 GO:0070509::calcium ion import confident hh_3ar4_A_1::4-72,74-92 very confident psy1679 250 Q8TF62::Probable phospholipid-transporting ATPase IM ::::Homo sapiens (taxid: 9606) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.75::91-180 PF00689::Cation_ATPase_C 94.78::105-179 GO:0005783::endoplasmic reticulum confident hh_2zxe_A_1::2-30,39-40,44-44,46-48,54-87 confident psy16789 608 Q80XR2::Calcium-transporting ATPase type 2C member 1 ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium.::Mus musculus (taxid: 10090) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::63-579 PF00689::Cation_ATPase_C 99.92::416-588 GO:0005794::Golgi apparatus confident hh_2zxe_A_1::66-527,529-599 very confident psy1020 132 Q9XES1::Calcium-transporting ATPase 4, endoplasmic reticulum-type ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment.::Arabidopsis thaliana (taxid: 3702) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.51::1-91 PF00689::Cation_ATPase_C 99.83::22-90 GO:0044548::S100 protein binding confident hh_3ar4_A_1::1-87 very confident psy8116 591 Q16720::Plasma membrane calcium-transporting ATPase 3 ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.::Homo sapiens (taxid: 9606) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::9-497 PF00689::Cation_ATPase_C 99.91::326-508 GO:0045121::membrane raft confident hh_2zxe_A_1::8-26,28-54,56-70,72-102,108-189,198-229,235-441,444-511 very confident psy6872 112 Q64541::Sodium/potassium-transporting ATPase subunit alpha-4 ::This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients. Plays a role in sperm motility.::Rattus norvegicus (taxid: 10116) portable COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 98.69::4-96 PF00689::Cation_ATPase_C 99.82::5-97 GO:0050896::response to stimulus confident hh_2zxe_A_1::6-112 very confident psy15153 169 P98194::Calcium-transporting ATPase type 2C member 1 ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium.::Homo sapiens (taxid: 9606) portable COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 98.99::81-160 PF00690::Cation_ATPase_N 99.85::84-152 GO:0005794::Golgi apparatus confident hh_2zxe_A_1::82-157 confident psy2749 217 Q5RDR3::Sodium/potassium-transporting ATPase subunit alpha-1 ::This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients.::Pongo abelii (taxid: 9601) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.77::2-182 PF00690::Cation_ATPase_N 99.80::4-72 GO:0005890::sodium:potassium-exchanging ATPase complex confident hh_2zxe_A_1::2-16,18-87,120-182 very confident psy14095 132 Q12697::Vacuolar cation-transporting ATPase YPK9 ::Vacuolar transporter which plays a role in sequestration of divalent heavy metal ions.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 98.93::42-129 PF00690::Cation_ATPase_N 99.41::35-91 GO:0043231::intracellular membrane-bounded organelle confident hh_2zxe_A_1::42-129 confident psy10302 125 P20020::Plasma membrane calcium-transporting ATPase 1 ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.::Homo sapiens (taxid: 9606) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.06::35-114 PF00690::Cation_ATPase_N 99.84::35-104 GO:0045121::membrane raft confident hh_3b8c_A_1::35-49,51-58,61-77,79-108 very confident psy6873 207 Q5RDR3::Sodium/potassium-transporting ATPase subunit alpha-1 ::This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions across the plasma membrane. This action creates the electrochemical gradient of sodium and potassium ions, providing the energy for active transport of various nutrients.::Pongo abelii (taxid: 9601) portable COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.93::14-204 PF00690::Cation_ATPase_N 99.68::17-85 GO:0050896::response to stimulus confident hh_3ixz_A_1::3-157,169-176,179-204 very confident psy11923 492 P19156::Potassium-transporting ATPase alpha chain 1 ::Catalyzes the hydrolysis of ATP coupled with the exchange of H(+) and K(+) ions across the plasma membrane. Responsible for acid production in the stomach.::Sus scrofa (taxid: 9823) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::1-451 PF00702::Hydrolase 99.84::122-352 GO:0006816::calcium ion transport confident hh_2zxe_A_1::1-294,296-304,316-320,338-355,357-453 very confident psy885 270 P22700::Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.::Drosophila melanogaster (taxid: 7227) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::32-269 PF00702::Hydrolase 99.82::147-269 GO:0016529::sarcoplasmic reticulum confident hh_2zxe_A_1::35-65,68-69,71-116,122-136,138-269 very confident psy6090 674 Q12697::Vacuolar cation-transporting ATPase YPK9 ::Vacuolar transporter which plays a role in sequestration of divalent heavy metal ions.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::25-586 PF00702::Hydrolase 99.64::188-364 GO:0043231::intracellular membrane-bounded organelle confident hh_2zxe_A_1::74-248,250-250,275-284,288-307,311-459,461-547,549-571,574-586,588-602 very confident psy11770 668 Q8Y8Q5::Calcium-transporting ATPase lmo0841 ::Catalyzes the hydrolysis of ATP coupled with the transport of calcium. The transport is electrogenic with a probable ATP:Ca(2+):H(+) stoichiometry of 1:1:1. May have an important role in survival of the bacterium when stressed by a combination of a high calcium concentration and alkaline pH.::Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) (taxid: 169963) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::2-667 PF00702::Hydrolase 99.89::332-468 GO:0045121::membrane raft confident hh_2zxe_A_1::2-45,55-59,68-219,223-266,268-281,283-314,316-317,322-401,410-441,447-653,656-668 very confident psy5005 125 O43861::Probable phospholipid-transporting ATPase IIB ::::Homo sapiens (taxid: 9606) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 99.49::2-67 PF00702::Hydrolase 98.06::42-89 GO:0055037::recycling endosome confident hh_3ixz_A_1::3-22,27-70 very confident psy78 523 no hit no match COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::186-521 PF08282::Hydrolase_3 99.65::344-521 GO:0043231::intracellular membrane-bounded organelle confident hh_2zxe_A_1::181-394,417-421,423-428,434-453,457-520 very confident psy8074 376 Q16720::Plasma membrane calcium-transporting ATPase 3 ::This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium out of the cell.::Homo sapiens (taxid: 9606) confident COG0474::MgtA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::12-358 PF13246::Hydrolase_like2 99.70::218-287 GO:0045121::membrane raft confident hh_2zxe_A_1::12-72,82-86,95-206,208-244,248-287,301-303,307-309,311-338,347-357 very confident psy3081 327 Q5R6B8::Mitochondrial sodium/hydrogen exchanger 9B2 ::Electroneutral exchange of protons for Na(+) across the inner mitochondrial membrane. Contributes to the organellar volume homeostasis. Required for osteoclast differentiation and bone resorption activity.::Pongo abelii (taxid: 9601) portable COG0475::KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] 100.00::3-324 PF00999::Na_H_Exchanger 100.00::3-324 GO:0005903::brush border confident hh_1zcd_A_1::23-69,75-110,114-142,146-149,151-155,163-164,166-178,181-183,187-187,189-195,198-211,214-230,232-233,235-323 confident psy9783 726 Q9UBT2::SUMO-activating enzyme subunit 2 ::The heterodimer acts as a E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2.::Homo sapiens (taxid: 9606) confident COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 99.97::2-252 PF00899::ThiF 99.96::18-237 GO:0000166::nucleotide binding confident hh_1y8q_B_1::5-86,172-286,304-310,315-317,328-336,344-369,371-456,458-553,555-600,602-661 very confident psy9593 84 A2VE14::SUMO-activating enzyme subunit 1 ::The heterodimer acts as a E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2.::Bos taurus (taxid: 9913) confident COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 99.86::5-82 PF00899::ThiF 99.86::19-83 GO:0005829::cytosol confident hh_1y8q_A_1::10-60,62-83 very confident psy13373 525 A3LQF9::Adenylyltransferase and sulfurtransferase UBA4 ::Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards URM1. Subsequently, a transient disulfide bond is formed. Does not use thiosulfate as sulfur donor; NFS1 probably acting as a sulfur donor for thiocarboxylation reactions. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation.::Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (taxid: 322104) confident COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 100.00::124-368 PF00899::ThiF 99.97::151-284 GO:0005829::cytosol confident hh_1zud_1_1::125-303,306-359,361-369 very confident psy9587 236 Q28DS0::SUMO-activating enzyme subunit 1 ::The heterodimer acts as a E1 ligase for sumo1, sumo2, and sumo3. It mediates ATP-dependent activation of sumo proteins followed by formation of a thioester bond between a sumo protein and a conserved active site cysteine residue on uba2/sae2.::Xenopus tropicalis (taxid: 8364) portable COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 99.96::98-236 PF00899::ThiF 99.97::115-236 GO:0005829::cytosol confident hh_1y8q_A_1::98-156,158-236 very confident psy7300 986 no hit no match COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 99.98::443-617 PF00899::ThiF 99.96::461-603 GO:0005829::cytosol very confident hh_1z7l_A_1::619-885 very confident psy2302 292 Q29HT0::Ubiquitin-like modifier-activating enzyme 5 ::E1-like enzyme which activates UFM1.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 100.00::2-249 PF00899::ThiF 99.98::16-158 GO:0016235::aggresome very confident hh_3h8v_A_1::1-262 very confident psy7810 478 Q9V6U8::NEDD8-activating enzyme E1 catalytic subunit ::Catalytic subunit of the dimeric Uba3-Ula1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-Uba3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of Ubc12.::Drosophila melanogaster (taxid: 7227) very confident COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 100.00::9-376 PF00899::ThiF 99.97::44-189 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2nvu_B_1::12-163,165-225,259-376,379-389,391-473 very confident psy17422 512 Q18217::NEDD8-activating enzyme E1 regulatory subunit ::Regulatory subunit of the dimeric uba-3-ula-1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-Uba-3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of ubc-12.::Caenorhabditis elegans (taxid: 6239) confident COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 99.93::2-216 PF00899::ThiF 99.95::11-212 GO:0046982::protein heterodimerization activity confident hh_1tt5_A_1::1-92,158-279,281-302,308-313,351-483 very confident psy9781 288 Q9UBT2::SUMO-activating enzyme subunit 2 ::The heterodimer acts as a E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2.::Homo sapiens (taxid: 9606) confident COG0476::ThiF Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 [Coenzyme metabolism] 97.40::1-37 PF10585::UBA_e1_thiolCys 99.79::27-67 GO:0019948::SUMO activating enzyme activity confident hh_1y8q_B_1::1-67,82-130,132-220,228-266,269-286 very confident psy11139 460 Q9CQS5::Serine/threonine-protein kinase RIO2 ::::Mus musculus (taxid: 10090) confident COG0478::RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] 100.00::1-209 PF01163::RIO1 99.92::38-208 GO:0005829::cytosol confident hh_4gyi_A_1::1-235 very confident psy5769 365 Q68XS0::Succinate dehydrogenase iron-sulfur subunit ::::Rickettsia typhi (strain ATCC VR-144 / Wilmington) (taxid: 257363) confident COG0479::FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion] 100.00::1-306 PF13085::Fer2_3 99.97::1-77 GO:0005749::mitochondrial respiratory chain complex II very confident hh_3vr8_B_1::1-51,156-314 very confident psy5785 340 Q007T0::Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial ::Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).::Sus scrofa (taxid: 9823) confident COG0479::FrdB Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion] 100.00::98-340 PF13085::Fer2_3 99.84::99-248 GO:0051538::3 iron, 4 sulfur cluster binding confident hh_3vr8_B_1::24-75,104-104,126-132,135-142,148-151,154-169,175-177,205-206,211-340 very confident psy5021 1021 Q7MA53::Elongation factor G ::Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.::Wolinella succinogenes (taxid: 844) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 100.00::4-662 PF00009::GTP_EFTU 99.97::6-278 GO:0005618::cell wall confident hh_2c78_A_1::646-1021 very confident psy11896 1043 Q29N77::Elongation factor G, mitochondrial ::Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Essential during development as it acts as a retrograde signal from mitochondria to the nucleus to slow down cell proliferation if mitochondrial energy output is low.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 100.00::196-1031 PF00009::GTP_EFTU 99.95::198-333 GO:0005634::nucleus very confident hh_2rdo_7_1::195-235,239-485,487-495,498-581,583-710,713-768,910-1025 very confident psy12559 610 Q29N77::Elongation factor G, mitochondrial ::Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Essential during development as it acts as a retrograde signal from mitochondria to the nucleus to slow down cell proliferation if mitochondrial energy output is low.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 100.00::1-591 PF00009::GTP_EFTU 99.94::2-103 GO:0005634::nucleus very confident hh_2rdo_7_1::1-254,257-340,342-469,472-551,554-590 very confident psy16810 755 Q3SYU2::Elongation factor 2 ::Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.::Bos taurus (taxid: 9913) very confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 100.00::5-741 PF00009::GTP_EFTU 99.95::6-157 GO:0005829::cytosol very confident hh_1n0u_A_1::2-79,84-755 very confident psy2609 161 Q8C0D5::Elongation factor Tu GTP-binding domain-containing protein 1 ::Involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with SBDS, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Has low intrinsic GTPase activity. GTPase activity is increased by contact with 60S ribosome subunits.::Mus musculus (taxid: 10090) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 99.85::3-136 PF00009::GTP_EFTU 99.81::7-109 GO:0005829::cytosol confident hh_3cb4_D_1::7-34,37-109 very confident psy15088 1291 Q5F3X4::116 kDa U5 small nuclear ribonucleoprotein component ::Component of the U5 snRNP complex required for pre-mRNA splicing.::Gallus gallus (taxid: 9031) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 100.00::397-1262 PF00009::GTP_EFTU 99.81::399-530 GO:0071013::catalytic step 2 spliceosome very confident hh_3cb4_D_1::398-430,434-525,528-530,535-535,537-543,548-555,576-577,681-681,685-700,706-724,788-808,810-831,841-855,857-878,880-889,891-901,903-939,941-967,969-991,1018-1021,1070-1072,1078-1081,1096-1097,1143-1182,1184-1184,1186-1239,1242-1258 very confident psy13097 123 Q8C0D5::Elongation factor Tu GTP-binding domain-containing protein 1 ::Involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with SBDS, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Has low intrinsic GTPase activity. GTPase activity is increased by contact with 60S ribosome subunits.::Mus musculus (taxid: 10090) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 99.85::1-103 PF00679::EFG_C 99.74::1-68 GO:0005829::cytosol confident hh_1n0u_A_1::2-68,85-107,110-115 very confident psy13098 81 Q8C0D5::Elongation factor Tu GTP-binding domain-containing protein 1 ::Involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with SBDS, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Has low intrinsic GTPase activity. GTPase activity is increased by contact with 60S ribosome subunits.::Mus musculus (taxid: 10090) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 97.75::2-61 PF00679::EFG_C 96.49::2-26 GO:0005829::cytosol confident hh_1n0u_A_1::2-26,43-61,64-77 confident psy11837 192 B1VET0::Elongation factor G ::Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.::Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) (taxid: 504474) portable COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 99.90::10-188 PF00679::EFG_C 99.81::40-126 GO:0009536::plastid confident rp_2rdo_7_1::26-27,30-119,121-128 very confident psy5461 221 Q0ID58::Elongation factor G ::Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.::Synechococcus sp. (strain CC9311) (taxid: 64471) portable COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 100.00::22-218 PF03144::GTP_EFTU_D2 99.38::115-182 GO:0003746::translation elongation factor activity confident hh_2rdo_7_1::44-217 very confident psy8851 2743 A6T3K7::Elongation factor G ::Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 100.00::497-1170 PF03947::Ribosomal_L2_C 100.00::1715-1843 GO:0034337::RNA folding confident hh_2rdo_7_1::497-982,984-1131,1134-1144,1153-1171 very confident psy11838 78 Q7Q3I6::Ribosome-releasing factor 2, mitochondrial ::Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Not involved in the GTP-dependent ribosomal translocation step during translation elongation.::Anopheles gambiae (taxid: 7165) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 99.75::1-65 PF14492::EFG_II 98.96::1-29 GO:0003746::translation elongation factor activity confident hh_2rdo_7_1::1-63 very confident psy15097 106 Q5F3X4::116 kDa U5 small nuclear ribonucleoprotein component ::Component of the U5 snRNP complex required for pre-mRNA splicing.::Gallus gallus (taxid: 9031) confident COG0480::FusA Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis] 91.80::74-103 PF14492::EFG_II 93.44::73-102 GO:0005829::cytosol confident hh_1n0u_A_1::2-49,51-78 very confident psy10091 237 Q9Z0S1::3'(2'),5'-bisphosphate nucleotidase 1 ::Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP. Has 1000-fold lower activity towards inositol 1,4-bisphosphate (Ins(1,4)P2) and inositol 1,3,4-trisphosphate (Ins(1,3,4)P3), but does not hydrolyze Ins(1)P, Ins(3,4)P2, Ins(1,3,4,5)P4 or InsP6.::Mus musculus (taxid: 10090) confident COG0483::SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism] 100.00::15-227 PF00459::Inositol_P 100.00::15-231 GO:0000287::magnesium ion binding confident hh_1jp4_A_1::17-33,41-104,106-114,116-215,218-235 very confident psy10017 324 Q9M8S8::Inositol-phosphate phosphatase ::Phosphatase acting on L-galactose 1-phosphate (L-Gal 1-P), D-myoinositol 3-phosphate (D-Ins 3-P) and D-myoinositol 1-phosphate (D-Ins 1-P). Can also use beta-glycerophosphate (glycerol 2-P) and, to a leser extend, D-galactose 1-phosphate (D-Gal 1-P), alpha-D-glucose 1-phosphate (a-D-Glc 1-P), D-manitol 1-phosphate and adenosine 2'-monophosphate as substrates. No activity with D-fructose 1-phosphate (D-Fru 1-P), fructose 1,6-bisphosphate (Fru 1,6-bisP), D-glucose 6-phosphate (D-Glc 6-P), D-alpha-glycerophosphate (glycerol 3-P), D-sorbitol 6-phosphate and D-myoinositol 2-phosphate. The C1 phosphate position in a six-member ring substrate is important for catalysis.::Arabidopsis thaliana (taxid: 3702) confident COG0483::SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism] 100.00::5-227 PF00459::Inositol_P 100.00::3-231 GO:0046855::inositol phosphate dephosphorylation confident hh_2bji_A_1::1-233 very confident psy10090 395 O95861::3'(2'),5'-bisphosphate nucleotidase 1 ::Converts adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) and 3'(2')-phosphoadenosine 5'- phosphate (PAP) to AMP. Has 1000-fold lower activity towards inositol 1,4-bisphosphate (Ins(1,4)P2) and inositol 1,3,4-trisphosphate (Ins(1,3,4)P3), but does not hydrolyze Ins(1)P, Ins(3,4)P2, Ins(1,3,4,5)P4 or InsP6.::Homo sapiens (taxid: 9606) confident COG0483::SuhB Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism] 99.95::211-376 PF03015::Sterile 99.96::35-128 GO:0000287::magnesium ion binding confident hh_1jp4_A_1::223-227,229-269,276-325,327-355,357-395 very confident psy13284 230 Q9QYI7::DnaJ homolog subfamily B member 8 ::::Mus musculus (taxid: 10090) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.98::27-145 PF00226::DnaJ 99.82::29-92 GO:0001669::acrosomal vesicle confident rp_3lz8_A_1::26-68,71-106,122-147,152-161 very confident psy16499 258 Q8WXX5::DnaJ homolog subfamily C member 9 ::::Homo sapiens (taxid: 9606) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.88::13-130 PF00226::DnaJ 99.45::16-68 GO:0005730::nucleolus confident hh_2ctp_A_1::13-75 very confident psy18223 264 Q9VGR7::J domain-containing protein CG6693 ::::Drosophila melanogaster (taxid: 7227) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.95::13-200 PF00226::DnaJ 99.74::16-80 GO:0005730::nucleolus confident hh_2lgw_A_1::15-51,53-88 very confident psy8513 183 B1XB02::Co-chaperone protein HscB ::Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA.::Escherichia coli (strain K12 / DH10B) (taxid: 316385) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.76::53-125 PF00226::DnaJ 99.71::55-124 GO:0005737::cytoplasm confident hh_1fpo_A_1::54-182 very confident psy5338 76 O75061::Putative tyrosine-protein phosphatase auxilin ::Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.::Homo sapiens (taxid: 9606) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.12::1-49 PF00226::DnaJ 98.54::1-29 GO:0005829::cytosol confident hh_2qwo_B_1::25-76 very confident psy2268 261 Q9UDY4::DnaJ homolog subfamily B member 4 ::Probable chaperone.::Homo sapiens (taxid: 9606) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::1-260 PF00226::DnaJ 99.78::4-65 GO:0031323::regulation of cellular metabolic process confident hh_3lz8_A_1::3-87,89-103,114-114,124-125,128-138,146-176,181-260 very confident psy8728 379 Q8N4W6::DnaJ homolog subfamily C member 22 ::May function as a co-chaperone.::Homo sapiens (taxid: 9606) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.85::306-375 PF00226::DnaJ 99.70::309-374 GO:0031410::cytoplasmic vesicle confident hh_2lgw_A_1::308-344,347-376 very confident psy4517 109 Q29455::DnaJ homolog subfamily C member 5 ::May have an important role in presynaptic function. May be involved in calcium-dependent neurotransmitter release at nerve endings.::Bos taurus (taxid: 9913) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.96::13-86 PF00226::DnaJ 99.86::16-78 GO:0043195::terminal bouton confident hh_2ctw_A_1::6-104 very confident psy5201 244 P92029::DnaJ-like protein 60 ::May play an important function during spermatogenesis and/or in the male genital tract.::Drosophila melanogaster (taxid: 7227) portable COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.91::38-111 PF00226::DnaJ 99.79::41-103 GO:0043231::intracellular membrane-bounded organelle confident hh_2lgw_A_1::40-108 very confident psy3538 89 B6HZ11::Chaperone protein DnaJ ::Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins.::Escherichia coli (strain SE11) (taxid: 409438) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.90::31-89 PF00226::DnaJ 99.78::34-88 GO:0043234::protein complex confident hh_2lgw_A_1::33-88 very confident psy15361 178 Q54ED3::DnaJ homolog subfamily A member 1 homolog ::Co-chaperone of hsc70. May play a role in protein import into mitochondria.::Dictyostelium discoideum (taxid: 44689) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.92::43-115 PF00226::DnaJ 99.77::47-106 GO:0043234::protein complex confident hh_2y4t_A_1::46-108 very confident psy7114 134 Q9UUG3::Diphthamide biosynthesis protein 4 ::Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.96::1-126 PF00226::DnaJ 99.81::2-61 GO:0043234::protein complex confident hh_2l6l_A_1::1-112,118-133 very confident psy7548 134 Q9UUG3::Diphthamide biosynthesis protein 4 ::Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.97::1-127 PF00226::DnaJ 99.83::2-61 GO:0043234::protein complex confident hh_2l6l_A_1::1-112,118-133 very confident psy3926 512 Q91WT4::DnaJ homolog subfamily C member 17 ::::Mus musculus (taxid: 10090) portable COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.85::250-323 PF00226::DnaJ 99.66::253-315 GO:0044428::nuclear part confident hh_2lgw_A_1::252-321 very confident psy3088 125 O75165::DnaJ homolog subfamily C member 13 ::::Homo sapiens (taxid: 9606) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.52::1-91 PF00226::DnaJ 98.54::1-33 GO:0055037::recycling endosome confident hh_2ctw_A_1::1-33,52-60 confident psy17599 180 Q91WT4::DnaJ homolog subfamily C member 17 ::::Mus musculus (taxid: 10090) portable COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.91::25-98 PF00226::DnaJ 99.81::28-90 GO:0070013::intracellular organelle lumen confident hh_2lgw_A_1::27-97 very confident psy16770 554 Q5FVM7::DnaJ homolog subfamily C member 16 ::::Rattus norvegicus (taxid: 10116) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.91::17-89 PF01216::Calsequestrin 99.94::127-480 GO:0005737::cytoplasm confident hh_3apq_A_1::19-93,102-107,109-114,117-119,122-123,125-141,145-178,180-202,204-239 very confident psy10927 858 P63037::DnaJ homolog subfamily A member 1 ::Co-chaperone of Hsc70. Seems to play a role in protein import into mitochondria.::Mus musculus (taxid: 10090) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::425-810 PF01556::CTDII 99.75::719-802 GO:0005829::cytosol confident hh_1nlt_A_1::561-629,631-723,725-777,779-804 very confident psy4965 179 Q2HJ94::DnaJ homolog subfamily A member 2 ::Co-chaperone of Hsc70.::Bos taurus (taxid: 9913) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.95::2-118 PF01556::CTDII 99.90::26-110 GO:0005829::cytosol confident hh_1nlt_A_1::1-83,85-112 very confident psy11462 237 Q3MI00::DnaJ homolog subfamily B member 1 ::Interacts with HSP70 and can stimulate its ATPase activity. Stimulates the association between HSC70 and HIP.::Bos taurus (taxid: 9913) portable COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::10-234 PF01556::CTDII 99.89::124-205 GO:0005829::cytosol confident hh_1c3g_A_1::33-59,62-65,70-71,73-159,161-207 very confident psy7265 352 no hit no match COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::1-351 PF01556::CTDII 99.87::265-346 GO:0005829::cytosol confident hh_3agx_A_1::174-295,297-352 very confident psy11884 644 Q96EY1::DnaJ homolog subfamily A member 3, mitochondrial ::Modulates apoptotic signal transduction or effector structures within the mitochondrial matrix. Affect cytochrome C release from the mitochondria and caspase 3 activation, but not caspase 8 activation. Isoform 1 increases apoptosis triggered by both TNF and the DNA-damaging agent mytomycin C; in sharp contrast, isoform 2 suppresses apoptosis. Can modulate IFN-gamma-mediated transcriptional activity. Isoform 2 may play a role in neuromuscular junction development as an effector of the MUSK signaling pathway.::Homo sapiens (taxid: 9606) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::202-636 PF01556::CTDII 99.78::517-596 GO:0044444::cytoplasmic part confident hh_3lz8_A_1::201-239,241-280,282-289,296-297,299-316,328-328,332-333,373-408,430-432,467-543,545-569,572-605 very confident psy4972 349 Q2HJ94::DnaJ homolog subfamily A member 2 ::Co-chaperone of Hsc70.::Bos taurus (taxid: 9913) very confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::1-349 PF01556::CTDII 99.84::266-349 GO:0045335::phagocytic vesicle very confident hh_1nlt_A_1::109-176,178-323,325-349 very confident psy1364 401 Q8MPX3::DnaJ homolog dnj-20 ::::Caenorhabditis elegans (taxid: 6239) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::87-401 PF01556::CTDII 99.86::321-401 GO:0051082::unfolded protein binding confident hh_3lz8_A_1::85-124,126-178,182-226,261-347,349-373,377-393,395-401 very confident psy5624 125 P91454::Mitochondrial import inner membrane translocase subunit TIM14 ::Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.::Caenorhabditis elegans (taxid: 6239) very confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.60::70-124 PF03656::Pam16 99.93::10-123 GO:0002119::nematode larval development confident hh_2guz_A_1::59-124 very confident psy5623 116 P91454::Mitochondrial import inner membrane translocase subunit TIM14 ::Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.::Caenorhabditis elegans (taxid: 6239) very confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.64::61-115 PF03656::Pam16 99.94::1-114 GO:0002119::nematode larval development confident hh_2guz_A_1::50-115 very confident psy9282 120 Q5XGJ0::Mitochondrial import inner membrane translocase subunit tim16 ::Regulates ATP-dependent protein translocation into the mitochondrial matrix.::Xenopus tropicalis (taxid: 8364) very confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.05::56-113 PF03656::Pam16 100.00::2-117 GO:0030150::protein import into mitochondrial matrix confident hh_2guz_B_1::56-115 very confident psy16387 676 Q96EY1::DnaJ homolog subfamily A member 3, mitochondrial ::Modulates apoptotic signal transduction or effector structures within the mitochondrial matrix. Affect cytochrome C release from the mitochondria and caspase 3 activation, but not caspase 8 activation. Isoform 1 increases apoptosis triggered by both TNF and the DNA-damaging agent mytomycin C; in sharp contrast, isoform 2 suppresses apoptosis. Can modulate IFN-gamma-mediated transcriptional activity. Isoform 2 may play a role in neuromuscular junction development as an effector of the MUSK signaling pathway.::Homo sapiens (taxid: 9606) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 100.00::24-291 PF12333::Ipi1_N 99.92::377-474 GO:0007528::neuromuscular junction development confident hh_2ctt_A_1::54-156 very confident psy16214 470 Q9QYI3::DnaJ homolog subfamily C member 7 ::Acts as co-chaperone regulating the molecular chaperones HSP70 and HSP90 in folding of steroid receptors, such as the glucocorticoid receptor and the progesterone receptor. Proposed to act as a recycling chaperone by facilitating the return of chaperone substrates to early stages of chaperoning if further folding is required. In vitro, induces ATP-independent dissociation of HSP90 but not of HSP70 from the chaperone-substrate complexes (By similarity). Recruits NR1I3 to the cytoplasm.::Mus musculus (taxid: 10090) confident COG0484::DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] 99.92::355-458 PF13429::TPR_15 99.93::42-333 GO:0045335::phagocytic vesicle confident hh_2y4t_A_1::2-391,394-426 very confident psy8073 593 Q22908::Ras and EF-hand domain-containing protein homolog ::May bind GTP and GDP.::Caenorhabditis elegans (taxid: 6239) confident COG0486::ThdF Predicted GTPase [General function prediction only] 99.91::351-562 PF00071::Ras 99.96::394-560 GO:0043234::protein complex confident rp_2fu5_C_1::390-512,519-560 very confident psy1007 445 Q2WBH0::tRNA modification GTPase MnmE ::Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.::Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) (taxid: 342108) confident COG0486::ThdF Predicted GTPase [General function prediction only] 100.00::24-445 PF10396::TrmE_N 100.00::29-209 GO:0005739::mitochondrion confident hh_3geh_A_1::22-80,142-189,191-268,271-295,355-425,427-443 very confident psy9409 472 A6T4D6::tRNA modification GTPase MnmE ::Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) very confident COG0486::ThdF Predicted GTPase [General function prediction only] 100.00::4-472 PF10396::TrmE_N 100.00::7-127 GO:0005829::cytosol confident hh_3geh_A_1::1-2,4-104,109-185,187-189,191-285,293-325,327-336,338-395,397-426,432-472 very confident psy16366 568 Q767L0::ATP-binding cassette sub-family F member 1 ::Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis.::Sus scrofa (taxid: 9823) confident COG0488::Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] 100.00::58-542 PF00005::ABC_tran 99.95::352-482 GO:0005829::cytosol confident hh_2ihy_A_1::333-345,347-447,449-529,531-539 very confident psy11936 548 Q767L0::ATP-binding cassette sub-family F member 1 ::Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis.::Sus scrofa (taxid: 9823) confident COG0488::Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] 100.00::145-538 PF00005::ABC_tran 99.93::162-321 GO:0005829::cytosol confident hh_2pcj_A_1::146-195,198-224,228-237,241-257,259-283,285-352,354-370 very confident psy208 443 Q66H39::ATP-binding cassette sub-family F member 3 ::::Rattus norvegicus (taxid: 10116) confident COG0488::Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] 100.00::8-442 PF00005::ABC_tran 99.95::293-424 GO:0005840::ribosome confident hh_2ihy_A_1::273-287,289-385,387-441 very confident psy2684 356 Q767L0::ATP-binding cassette sub-family F member 1 ::Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis.::Sus scrofa (taxid: 9823) confident COG0488::Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] 100.00::3-356 PF00005::ABC_tran 99.88::196-356 GO:0005840::ribosome confident hh_2iw3_A_1::3-99,104-104,119-120,122-123,146-146,149-155,157-163,168-241 very confident psy15138 320 O00178::GTP-binding protein 1 ::Promotes degradation of target mRNA species. Plays a role in the regulation of circadian mRNA stability. Binds GTP and has GTPase activity.::Homo sapiens (taxid: 9606) confident COG0488::Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] 99.92::52-313 PF00009::GTP_EFTU 99.53::12-126 GO:0005829::cytosol confident hh_3sjy_A_1::14-41,44-105,107-127 confident psy10512 629 Q2KJA2::ATP-binding cassette sub-family F member 2 ::::Bos taurus (taxid: 9913) very confident COG0488::Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only] 100.00::87-609 no hit no match GO:0005829::cytosol confident hh_2ihy_A_1::397-411,414-512,514-596,598-606 very confident psy9977 192 Q29DB7::Cytosolic Fe-S cluster assembly factor NUBP2 homolog ::Component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for maturation of extramitochondrial Fe/S proteins. May bind and transfer a labile 4Fe-4S cluster to target apoproteins.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG0489::Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] 100.00::4-192 PF06564::YhjQ 99.94::6-186 GO:0005829::cytosol confident hh_2ph1_A_1::3-72,74-140,144-191 very confident psy5665 344 Q3T094::Protein ETHE1, mitochondrial ::Probably plays an important role in metabolic homeostasis in mitochondria. May function as a nuclear-cytoplasmic shuttling protein that binds transcription factor RELA/NFKB3 in the nucleus and exports it to the cytoplasm. Suppresses p53-induced apoptosis by preventing nuclear localization of RELA.::Bos taurus (taxid: 9913) confident COG0491::GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] 99.83::51-281 PF00753::Lactamase_B 99.80::50-280 GO:0005739::mitochondrion confident hh_2gcu_A_1::41-123,146-187,192-193,230-302,305-340 very confident psy1547 216 Q561R9::Beta-lactamase-like protein 2 ::::Rattus norvegicus (taxid: 10116) confident COG0491::GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] 99.92::30-203 PF00753::Lactamase_B 99.89::30-201 GO:0005739::mitochondrion confident hh_4ad9_A_1::1-114,118-207 very confident psy17909 140 O35952::Hydroxyacylglutathione hydrolase, mitochondrial ::Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.::Rattus norvegicus (taxid: 10116) confident COG0491::GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only] 98.83::3-71 PF00753::Lactamase_B 97.98::3-69 GO:0005829::cytosol confident hh_2qed_A_1::2-16,18-18,23-53,55-124 very confident psy5231 148 O84101::Thioredoxin reductase ::::Chlamydia trachomatis (strain D/UW-3/Cx) (taxid: 272561) portable COG0492::TrxB Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones] 99.94::3-148 PF00070::Pyr_redox 99.56::17-84 GO:0005622::intracellular confident hh_1trb_A_1::5-14,19-125,127-148 very confident psy12810 276 Q0JKD0::Glutamate synthase 1 [NADH], chloroplastic ::Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0493::GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] 99.93::1-276 PF00743::FMO-like 99.72::111-275 GO:0005829::cytosol confident rp_2vdc_G_1::139-276 very confident psy4525 388 P22570::NADPH:adrenodoxin oxidoreductase, mitochondrial ::Serves as the first electron transfer protein in all the mitochondrial P450 systems. Including cholesterol side chain cleavage in all steroidogenic tissues, steroid 11-beta hydroxylation in the adrenal cortex, 25-OH-vitamin D3-24 hydroxylation in the kidney, and sterol C-27 hydroxylation in the liver.::Homo sapiens (taxid: 9606) confident COG0493::GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] 99.97::11-385 PF00743::FMO-like 99.93::14-211 GO:0050660::flavin adenine dinucleotide binding confident hh_1cjc_A_1::11-327,329-386 very confident psy11001 81 Q0JKD0::Glutamate synthase 1 [NADH], chloroplastic ::Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0493::GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] 99.75::1-80 PF14691::Fer4_20 99.08::1-41 GO:0009570::chloroplast stroma confident hh_2vdc_G_1::1-80 very confident psy16201 240 Q6NYG8::Dihydropyrimidine dehydrogenase [NADP(+)] ::Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine.::Danio rerio (taxid: 7955) confident COG0493::GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] 100.00::19-230 PF14691::Fer4_20 100.00::19-131 GO:0050661::NADP binding very confident hh_1gte_A_1::16-216,218-228 very confident psy12811 74 Q12680::Glutamate synthase [NADH] ::Forms L-glutamate from L-glutamine and 2-oxoglutarate. Represents an alternative pathway to L-glutamate dehydrogenase for the biosynthesis of L-glutamate. Participates with glutamine synthetase in ammonia assimilation processes. The enzyme is specific for NADH, L-glutamine and 2-oxoglutarate.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0493::GltD NADPH-dependent glutamate synthase beta chain and related oxidoreductases [Amino acid transport and metabolism / General function prediction only] 99.03::1-69 no hit no match GO:0005739::mitochondrion confident hh_2vdc_G_1::2-16,25-33,36-46 confident psy1520 107 Q8VDC0::Probable leucine--tRNA ligase, mitochondrial ::::Mus musculus (taxid: 10090) confident COG0495::LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::12-103 PF00133::tRNA-synt_1 99.47::26-103 GO:0005739::mitochondrion confident hh_2v0c_A_1::14-83 very confident psy6621 133 A1WCP8::Leucine--tRNA ligase ::::Acidovorax sp. (strain JS42) (taxid: 232721) confident COG0495::LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-130 PF00133::tRNA-synt_1 100.00::3-130 GO:0009570::chloroplast stroma confident hh_2v0c_A_1::3-32,38-130 very confident psy2890 893 A1WCP8::Leucine--tRNA ligase ::::Acidovorax sp. (strain JS42) (taxid: 232721) very confident COG0495::LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-893 PF00133::tRNA-synt_1 100.00::13-675 GO:0009570::chloroplast stroma confident hh_4arc_A_1::1-31,35-209,211-243,254-339,341-383,385-393,396-491,494-592,594-620,622-698,700-706,714-764,772-808,812-829,832-893 very confident psy8378 230 P49815::Tuberin ::In complex with TSC1, inhibits the nutrient-mediated or growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by negatively regulating mTORC1 signaling. Acts as a GTPase-activating protein (GAP) for the small GTPase RHEB, a direct activator of the protein kinase activity of mTORC1. Implicated as a tumor suppressor. Involved in microtubule-mediated protein transport, but this seems to be due to unregulated mTOR signaling. Stimulates weakly the intrinsic GTPase activity of the Ras-related proteins RAP1A and RAB5 in vitro. Mutations in TSC2 lead to constitutive activation of RAP1A in tumors.::Homo sapiens (taxid: 9606) confident COG0495::LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 99.81::53-228 PF03542::Tuberin 100.00::2-135 GO:0005737::cytoplasm confident hh_2v0c_A_1::65-82,84-99,101-102,106-185,187-217,221-226 very confident psy4626 542 Q96HN2::Putative adenosylhomocysteinase 3 ::::Homo sapiens (taxid: 9606) confident COG0499::SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] 100.00::1-288 PF00670::AdoHcyase_NAD 100.00::55-214 GO:0031440::regulation of mRNA 3'-end processing confident hh_3gvp_A_1::1-291 very confident psy7896 718 Q27580::Adenosylhomocysteinase ::Adenosylhomocysteine is a competitive inhibitor of S-adenosyl-L-methinine-dependent methyl transferase reactions; therefore adenosylhomocysteinase may play a key role in the control of methylations via regulation of the intracellular concentration of adenosylhomocysteine.::Drosophila melanogaster (taxid: 7227) confident COG0499::SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism] 100.00::1-710 PF05221::AdoHcyase 100.00::1-246 GO:0005829::cytosol confident hh_3h9u_A_1::1-153,217-264,344-460,612-718 very confident psy5221 436 A6SXH1::Protease HtpX homolog ::::Janthinobacterium sp. (strain Marseille) (taxid: 375286) confident COG0501::HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] 99.97::22-283 PF01435::Peptidase_M48 99.94::60-275 GO:0009279::cell outer membrane confident rp_3cqb_A_1::40-142 very confident psy7467 295 Q6EPN8::CAAX prenyl protease 1 homolog ::Proteolytically removes the C-terminal three residues of farnesylated proteins.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0501::HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] 99.05::168-295 PF01435::Peptidase_M48 99.50::173-295 GO:0030327::prenylated protein catabolic process confident hh_4aw6_A_1::45-295 very confident psy4798 623 Q54FH7::CAAX prenyl protease 1 homolog ::Proteolytically removes the C-terminal three residues of farnesylated proteins.::Dictyostelium discoideum (taxid: 44689) portable COG0501::HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] 99.89::11-259 PF01435::Peptidase_M48 99.90::408-622 GO:0071586::CAAX-box protein processing confident hh_4aw6_A_1::4-77,212-214,263-282,284-347,380-588,590-622 very confident psy14485 348 Q2T1Q4::Biotin synthase ::Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.::Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) (taxid: 271848) very confident COG0502::BioB Biotin synthase and related enzymes [Coenzyme metabolism] 100.00::26-337 PF04055::Radical_SAM 99.77::68-231 GO:0008270::zinc ion binding confident hh_1r30_A_1::25-339 very confident psy8190 348 Q2T1Q4::Biotin synthase ::Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism.::Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) (taxid: 271848) very confident COG0502::BioB Biotin synthase and related enzymes [Coenzyme metabolism] 100.00::26-337 PF04055::Radical_SAM 99.77::68-231 GO:0008270::zinc ion binding confident hh_1r30_A_1::25-339 very confident psy6201 220 Q8YNI3::Adenine phosphoribosyltransferase ::Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.::Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690) confident COG0503::Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism] 99.97::28-220 PF00156::Pribosyltran 99.68::48-199 GO:0005829::cytosol confident hh_1zn8_A_1::28-40,43-110,141-220 very confident psy17159 326 Q2M197::CTP synthase ::Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Constitutes the rate-limiting enzyme in the synthesis of cytosine nucleotides.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0504::PyrG CTP synthase (UTP-ammonia lyase) [Nucleotide transport and metabolism] 100.00::4-303 PF00117::GATase 99.94::49-297 GO:0006241::CTP biosynthetic process confident hh_3nva_A_1::4-94,103-174,178-209,212-222,224-258,260-300 very confident psy1128 337 P27708::CAD protein ::This protein is a "fusion" protein encoding four enzymatic activities of the pyrimidine pathway (GATase, CPSase, ATCase and DHOase).::Homo sapiens (taxid: 9606) confident COG0505::CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism] 100.00::2-250 PF00988::CPSase_sm_chain 100.00::2-115 GO:0004088::carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity confident hh_1a9x_B_1::2-41,51-249 very confident psy8069 466 Q04499::Proline dehydrogenase 1, mitochondrial ::Converts proline to delta-1-pyrroline-5-carboxylate.::Drosophila melanogaster (taxid: 7227) confident COG0506::PutA Proline dehydrogenase [Amino acid transport and metabolism] 99.56::119-390 PF01619::Pro_dh 100.00::119-441 GO:0005739::mitochondrion confident hh_2ekg_A_1::129-162,167-200,207-225,244-245,251-254,268-283,313-317,323-325,343-350,358-370,373-406,417-435 very confident psy14809 90 Q80SX8::ATP-dependent DNA helicase PIF1 ::DNA-dependent ATPase and DNA helicase inhibiting telomerase activity by unwinding DNA/RNA duplex formed by telomerase RNA and telomeric DNA in a 5' to 3' polarity. Negatively regulates telomere length and such inhibition requires its ATPase activity. Tightly cell cycle-regulated and expressed in late S/G2 phase.::Mus musculus (taxid: 10090) portable COG0507::RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] 99.89::1-90 PF02689::Herpes_Helicase 99.71::35-89 GO:0031981::nuclear lumen confident hh_3e1s_A_1::1-5,7-89 confident psy4476 266 Q9EPU0::Regulator of nonsense transcripts 1 ::RNA-dependent helicase and ATPase required for nonsense-mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. Recruited by release factors to stalled ribosomes together with the SMG1C protein kinase complex to form the transient SURF (SMG1-UPF1-eRF1-eRF3) complex. In EJC-dependent NMD, the SURF complex associates with the exon junction complex (EJC) (located 50-55 or more nucleotides downstream from the termination codon) through UPF2 and allows the formation of an UPF1-UPF2-UPF3 surveillance complex which is believed to activate NMD. Phosphorylated UPF1 is recognized by EST1B/SMG5, SMG6 and SMG7 which are thought to provide a link to the mRNA degradation machinery involving exonucleolytic and endonucleolytic pathways, and to serve as adapters to protein phosphatase 2A (PP2A), thereby triggering UPF1 dephosphorylation. UPF1 can also activate NMD without UPF2 or UPF3, and in the absence of the NMD-enhancing downstream EJC indicative for alternative NMD pathways. Plays a role in replication-dependent histone mRNA degradation at the end of phase S; the function is independent of UPF2. For the recognition of premature termination codons (PTC) and initiation of NMD a competitive interaction between UPF1 and PABPC1 with the ribosome-bound release factors is proposed. The ATPase activity of UPF1 is required for disassembly of mRNPs undergoing NMD (By similarity). Essential for embryonic viability.::Mus musculus (taxid: 10090) confident COG0507::RecD ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member [DNA replication, recombination, and repair] 98.57::132-249 PF13086::AAA_11 99.56::133-195 GO:0044424::intracellular part confident rp_2wjy_A_1::52-70,73-156 very confident psy7777 294 P36957::Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Homo sapiens (taxid: 9606) confident COG0508::AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] 100.00::18-293 PF00198::2-oxoacid_dh 100.00::76-292 GO:0005634::nucleus confident hh_3mae_A_1::71-118,123-154,158-162,170-175,177-294 very confident psy16142 426 Q19749::Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial ::The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).::Caenorhabditis elegans (taxid: 6239) confident COG0508::AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] 100.00::83-426 PF00198::2-oxoacid_dh 99.96::278-425 GO:0005811::lipid particle confident hh_3b8k_A_1::278-315,317-385,405-425 very confident psy14345 431 Q9FLQ4::Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1, mitochondrial ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Arabidopsis thaliana (taxid: 3702) confident COG0508::AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] 100.00::8-344 PF00198::2-oxoacid_dh 100.00::103-344 GO:0006103::2-oxoglutarate metabolic process confident hh_3mae_A_1::102-204,210-210,215-229,232-232,238-252,254-345 very confident psy6394 1045 P53395::Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial ::The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).::Mus musculus (taxid: 10090) portable COG0508::AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] 100.00::446-909 PF00198::2-oxoacid_dh 100.00::677-909 GO:0015630::microtubule cytoskeleton confident hh_3b8k_A_2::900-1044 very confident psy10440 64 Q8BKZ9::Pyruvate dehydrogenase protein X component, mitochondrial ::Required for anchoring dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide transacetylase (E2) core of the pyruvate dehydrogenase complexes of eukaryotes. This specific binding is essential for a functional PDH complex.::Mus musculus (taxid: 10090) confident COG0508::AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] 99.79::1-64 PF00364::Biotin_lipoyl 99.79::1-63 GO:0005507::copper ion binding confident hh_1zy8_K_1::1-63 very confident psy10439 219 Q4ULG1::Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex ::The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) confident COG0508::AceF Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion] 99.87::42-124 PF00364::Biotin_lipoyl 99.80::44-118 GO:0044446::intracellular organelle part confident rp_2dne_A_1::44-144 very confident psy8745 317 A7MCT6::Ethanolamine kinase 2 ::Highly specific for ethanolamine phosphorylation. Does not have choline kinase activity.::Mus musculus (taxid: 10090) confident COG0510::ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism] 99.78::22-180 PF01633::Choline_kinase 99.78::22-105 GO:0004103::choline kinase activity confident hh_3mes_A_1::22-57,59-60,62-182 very confident psy15665 107 O54783::Choline/ethanolamine kinase ::Has a key role in phospholipid biosynthesis. Catalyzes the first step in phosphatidylethanolamine biosynthesis. Phosphorylates ethanolamine, and can also act on choline (in vitro). Has higher activity with ethanolamine. May not significantly contribute to in vivo phosphatidylcholine biosynthesis.::Rattus norvegicus (taxid: 10116) portable COG0510::ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism] 99.65::3-98 PF01633::Choline_kinase 99.93::3-100 GO:0004104::cholinesterase activity confident hh_1nw1_A_1::4-40,42-104 very confident psy15662 256 O54783::Choline/ethanolamine kinase ::Has a key role in phospholipid biosynthesis. Catalyzes the first step in phosphatidylethanolamine biosynthesis. Phosphorylates ethanolamine, and can also act on choline (in vitro). Has higher activity with ethanolamine. May not significantly contribute to in vivo phosphatidylcholine biosynthesis.::Rattus norvegicus (taxid: 10116) portable COG0510::ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism] 97.22::75-210 PF01633::Choline_kinase 99.83::100-206 GO:0006657::CDP-choline pathway confident hh_3feg_A_1::1-47,97-112,115-153,160-210 very confident psy15664 174 Q9Y259::Choline/ethanolamine kinase ::Has a key role in phospholipid biosynthesis. Catalyzes the first step in phosphatidylethanolamine biosynthesis. Phosphorylates ethanolamine, and can also act on choline (in vitro). Has higher activity with ethanolamine. May not significantly contribute to in vivo phosphatidylcholine biosynthesis.::Homo sapiens (taxid: 9606) portable COG0510::ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism] 99.82::7-167 PF01633::Choline_kinase 99.92::4-119 GO:0006657::CDP-choline pathway confident hh_3feg_A_1::8-46,67-174 very confident psy12876 115 Q92820::Gamma-glutamyl hydrolase ::Hydrolyzes the polyglutamate sidechains of pteroylpolyglutamates. Progressively removes gamma-glutamyl residues from pteroylpoly-gamma-glutamate to yield pteroyl-alpha-glutamate (folic acid) and free glutamate. May play an important role in the bioavailability of dietary pteroylpolyglutamates and in the metabolism of pteroylpolyglutamates and antifolates.::Homo sapiens (taxid: 9606) portable COG0512::PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] 99.38::4-50 PF00117::GATase 98.92::6-74 GO:0005773::vacuole confident hh_1l9x_A_1::5-99,102-115 very confident psy7151 188 Q3THK7::GMP synthase [glutamine-hydrolyzing] ::Involved in the de novo synthesis of guanine nucleotides which are not only essential for DNA and RNA synthesis, but also provide GTP, which is involved in a number of cellular processes important for cell division.::Mus musculus (taxid: 10090) confident COG0512::PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] 99.86::15-95 PF00117::GATase 98.85::16-95 GO:0005829::cytosol confident hh_2vxo_A_2::4-67,116-116,128-184 very confident psy15935 202 Q92820::Gamma-glutamyl hydrolase ::Hydrolyzes the polyglutamate sidechains of pteroylpolyglutamates. Progressively removes gamma-glutamyl residues from pteroylpoly-gamma-glutamate to yield pteroyl-alpha-glutamate (folic acid) and free glutamate. May play an important role in the bioavailability of dietary pteroylpolyglutamates and in the metabolism of pteroylpolyglutamates and antifolates.::Homo sapiens (taxid: 9606) confident COG0512::PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism] 99.95::5-135 PF00117::GATase 99.88::6-158 GO:0005829::cytosol confident hh_1l9x_A_1::4-23,25-100,102-186,190-202 very confident psy13286 351 Q54E49::Probable ATP-dependent RNA helicase ddx6 ::ATP-dependent RNA helicase which may be involved in mRNA turnover.::Dictyostelium discoideum (taxid: 44689) very confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::1-317 PF00270::DEAD 99.83::1-144 GO:0000932::cytoplasmic mRNA processing body very confident hh_1s2m_A_1::1-22,24-328 very confident psy7789 197 no hit no match COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::12-196 PF00270::DEAD 99.59::11-105 GO:0003677::DNA binding confident hh_1wrb_A_1::11-132 very confident psy10677 317 Q5B0J9::ATP-dependent RNA helicase dbp2 ::ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::135-316 PF00270::DEAD 99.84::168-309 GO:0003712::transcription cofactor activity confident hh_3fe2_A_1::108-158,168-179,182-187,192-303,305-315 very confident psy8712 651 no hit no match COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::3-518 PF00270::DEAD 99.93::286-416 GO:0003712::transcription cofactor activity confident no hit no match psy18032 333 A3BT52::DEAD-box ATP-dependent RNA helicase 29 ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::37-321 PF00270::DEAD 99.90::61-215 GO:0003714::transcription corepressor activity confident hh_3fmo_B_1::34-102,105-151,155-224 very confident psy18035 104 Q2UHC1::ATP-dependent RNA helicase dbp10 ::ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs.::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.94::8-103 PF00270::DEAD 99.70::6-102 GO:0003714::transcription corepressor activity confident hh_1vec_A_1::4-102 very confident psy9740 189 A1A4H6::Probable ATP-dependent RNA helicase DDX27 ::Probable ATP-dependent RNA helicase.::Bos taurus (taxid: 9913) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.95::1-189 PF00270::DEAD 99.17::1-70 GO:0004004::ATP-dependent RNA helicase activity confident hh_2i4i_A_1::1-14,16-77,134-172,176-188 very confident psy6409 1832 Q4I7F9::Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 ::ATP-dependent RNA helicase involved in mRNA splicing. May destabilize the U1/5'-splice site duplex to permit an effective competition for the 5'-splice site by the U6 snRNA, resulting in the switch between U1 and U6 at the 5'-splice site. May also act to unwind the U4/U6 base-pairing interaction in the U4/U6/U5 snRNP, facilitating the first covalent step of splicing.::Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::728-1122 PF00270::DEAD 99.91::11-167 GO:0005682::U5 snRNP confident hh_3fe2_A_2::1377-1471,1476-1583,1609-1643 very confident psy17644 330 Q2U2J6::Pre-mRNA-processing ATP-dependent RNA helicase prp5 ::ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA.::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::167-330 PF00270::DEAD 99.92::191-329 GO:0005730::nucleolus confident hh_3fe2_A_1::141-330 very confident psy12983 838 Q9NVP1::ATP-dependent RNA helicase DDX18 ::Probable RNA-dependent helicase.::Homo sapiens (taxid: 9606) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::394-761 PF00270::DEAD 99.91::420-589 GO:0005730::nucleolus confident hh_3ly5_A_1::391-603 very confident psy11948 167 O74393::ATP-dependent RNA helicase mak5 ::ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.84::3-66 PF00270::DEAD 99.17::26-66 GO:0005737::cytoplasm confident hh_2i4i_A_1::1-39,41-67 very confident psy12984 178 Q03532::ATP-dependent RNA helicase HAS1 ::ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.91::66-166 PF00270::DEAD 99.58::92-164 GO:0005829::cytosol confident hh_3ly5_A_1::62-168 very confident psy12410 615 Q4IP34::Pre-mRNA-processing ATP-dependent RNA helicase PRP5 ::ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA.::Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::326-615 PF00270::DEAD 99.94::350-523 GO:0005829::cytosol confident hh_3fe2_A_1::299-312,314-468,472-540 very confident psy17912 779 Q5B0J9::ATP-dependent RNA helicase dbp2 ::ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::128-489 PF00270::DEAD 99.92::152-322 GO:0005829::cytosol confident no hit no match psy11867 399 Q61655::ATP-dependent RNA helicase DDX19A ::ATP-dependent RNA helicase involved in mRNA export from the nucleus.::Mus musculus (taxid: 10090) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::103-399 PF00270::DEAD 99.94::127-294 GO:0005829::cytosol confident hh_3fht_A_1::81-399 very confident psy1604 693 Q75B50::ATP-dependent RNA helicase DED1 ::ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::198-648 PF00270::DEAD 99.92::222-399 GO:0005829::cytosol confident hh_2i4i_A_1::186-405,476-624,626-656 very confident psy15524 930 Q7XJN0::DEAD-box ATP-dependent RNA helicase 17 ::::Arabidopsis thaliana (taxid: 3702) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::390-778 PF00270::DEAD 99.92::416-592 GO:0005829::cytosol confident hh_3fmo_B_1::386-395,397-408,410-456,463-511,515-571,575-607 very confident psy3143 337 Q96GQ7::Probable ATP-dependent RNA helicase DDX27 ::Probable ATP-dependent RNA helicase.::Homo sapiens (taxid: 9606) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::91-333 PF00270::DEAD 99.97::115-284 GO:0005829::cytosol confident hh_2pl3_A_1::88-209,211-300 very confident psy7557 936 Q9NXZ2::Probable ATP-dependent RNA helicase DDX43 ::::Homo sapiens (taxid: 9606) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::75-444 PF00270::DEAD 99.92::100-270 GO:0005829::cytosol confident hh_1wrb_A_1::72-79,81-288 very confident psy12977 226 Q9Y2R4::Probable ATP-dependent RNA helicase DDX52 ::::Homo sapiens (taxid: 9606) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::18-224 PF00270::DEAD 99.96::37-209 GO:0005829::cytosol confident hh_3dkp_A_1::19-226 very confident psy9400 453 P44701::ATP-dependent RNA helicase SrmB homolog ::RNA-dependent ATPase activity.::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::2-393 PF00270::DEAD 99.94::25-218 GO:0005840::ribosome confident hh_3fe2_A_1::1-69,93-125,127-235 very confident psy9399 453 P44701::ATP-dependent RNA helicase SrmB homolog ::RNA-dependent ATPase activity.::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::2-393 PF00270::DEAD 99.94::25-218 GO:0005840::ribosome confident hh_3fe2_A_1::1-69,93-125,127-235 very confident psy9401 453 P44701::ATP-dependent RNA helicase SrmB homolog ::RNA-dependent ATPase activity.::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::2-393 PF00270::DEAD 99.94::25-218 GO:0005840::ribosome confident hh_3fe2_A_1::1-69,93-125,127-235 very confident psy8497 2355 P0C218::Probable ATP-dependent RNA helicase DDX20 ::The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. It may also play a role in the metabolism of snoRNPs.::Danio rerio (taxid: 7955) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::21-387 PF00270::DEAD 99.84::45-205 GO:0010468::regulation of gene expression confident hh_3pey_A_1::21-85,87-117,119-242,250-385 very confident psy16633 540 Q9D0R4::Probable ATP-dependent RNA helicase DDX56 ::May play a role in later stages of the processing of the pre-ribosomal particles leading to mature 60S ribosomal subunits. Has intrinsic ATPase activity.::Mus musculus (taxid: 10090) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::22-428 PF00270::DEAD 99.94::42-215 GO:0022008::neurogenesis confident hh_3fmo_B_1::22-83,89-119,121-137,141-165,167-231 very confident psy12758 308 A2QI25::ATP-dependent RNA helicase ded1 ::ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes.::Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::60-307 PF00270::DEAD 99.97::85-307 GO:0043025::neuronal cell body confident hh_2i4i_A_1::61-130,156-156,162-167,175-306 very confident psy3307 130 Q9VHP0::ATP-dependent RNA helicase bel ::ATP-dependent RNA helicase that is essential and required for cellular function, larval growth, and for male and female fertility. Also required for RNA interference (RNAi), double-stranded RNA induces potent and specific gene silencing, by acting downstream of dsRNA internalization. RNAi is mediated by the RNA-induced silencing complex (RISC), a sequence-specific, multicomponent nuclease that destroys or silences messenger RNAs homologous to the silencing trigger.::Drosophila melanogaster (taxid: 7227) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.94::10-130 PF00270::DEAD 99.73::35-129 GO:0043025::neuronal cell body confident rp_2i4i_A_1::13-129 very confident psy4275 182 Q4WJE9::ATP-dependent rRNA helicase rrp3 ::Required for pre-ribosomal RNA processing. Involved in the maturation of the 35S-pre-rRNA and to its cleavage to mature 18S rRNA.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.97::6-176 PF00270::DEAD 99.95::30-173 GO:0043234::protein complex confident hh_3ber_A_1::4-173 very confident psy7786 252 Q9V3C0::ATP-dependent RNA helicase abstrakt ::ATP-dependent RNA helicase. Is essential for the directed and fasciculated early outgrowth of the bolwig nerves, as well as for its navigation at later stages. Is required during post-transcriptional gene expression. Plays a role during morphogenetic process, apoptosis and the establishment of cell polarity.::Drosophila melanogaster (taxid: 7227) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::1-244 PF00270::DEAD 99.67::2-161 GO:0043234::protein complex confident hh_3fmo_B_1::1-36,45-74,76-92,96-102,105-105,110-127,129-138,144-159 very confident psy7268 134 no hit no match COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.89::39-134 PF00270::DEAD 99.55::63-133 GO:0043234::protein complex confident hh_2gxq_A_1::40-105,112-133 very confident psy13288 200 Q54E49::Probable ATP-dependent RNA helicase ddx6 ::ATP-dependent RNA helicase which may be involved in mRNA turnover.::Dictyostelium discoideum (taxid: 44689) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::8-200 PF00270::DEAD 99.24::12-145 GO:0043933::macromolecular complex subunit organization confident hh_1s2m_A_1::15-81,83-96,102-116,120-200 very confident psy2764 419 Q15477::Helicase SKI2W ::Helicase; has ATPase activity. Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C).::Homo sapiens (taxid: 9606) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::44-416 PF00270::DEAD 99.93::75-221 GO:0044428::nuclear part confident hh_3l9o_A_1::67-259,263-377,382-417 very confident psy10680 537 Q8SRB2::ATP-dependent RNA helicase DBP2 ::ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::22-506 PF00270::DEAD 99.90::47-250 GO:0044428::nuclear part confident hh_2i4i_A_1::19-38,40-76,112-263,266-266,268-275,295-313,366-391,393-514 very confident psy1548 448 Q29024::Spliceosome RNA helicase DDX39B ::Splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint. Has both RNA-stimulated ATP binding/hydrolysis activity and ATP-dependent RNA unwinding activity. Even with the stimulation of RNA, the ATPase activity is weak. Can only hydrolyze ATP but not other NTPs. The RNA stimulation of ATPase activity does not have a strong preference for the sequence and length of the RNA. However, ssRNA stimulates the ATPase activity much more strongly than dsRNA. The ATPase and helicase activities are not influenced by U2AF2 and ALYREF/THOC4.::Sus scrofa (taxid: 9823) very confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::80-448 PF00270::DEAD 99.94::131-304 GO:0046784::intronless viral mRNA export from host nucleus confident hh_1xti_A_1::79-99,123-129,133-135,142-448 very confident psy1539 175 Q29024::Spliceosome RNA helicase DDX39B ::Splice factor that is required for the first ATP-dependent step in spliceosome assembly and for the interaction of U2 snRNP with the branchpoint. Has both RNA-stimulated ATP binding/hydrolysis activity and ATP-dependent RNA unwinding activity. Even with the stimulation of RNA, the ATPase activity is weak. Can only hydrolyze ATP but not other NTPs. The RNA stimulation of ATPase activity does not have a strong preference for the sequence and length of the RNA. However, ssRNA stimulates the ATPase activity much more strongly than dsRNA. The ATPase and helicase activities are not influenced by U2AF2 and ALYREF/THOC4.::Sus scrofa (taxid: 9823) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::14-172 PF00270::DEAD 99.91::38-172 GO:0046784::intronless viral mRNA export from host nucleus confident hh_3fmo_B_1::12-127,131-172 very confident psy7691 165 Q8SRB2::ATP-dependent RNA helicase DBP2 ::ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.67::40-148 PF00270::DEAD 98.66::64-147 GO:0071013::catalytic step 2 spliceosome confident hh_3fe2_A_1::13-95,99-100,106-129,131-144 very confident psy9277 178 Q3B8Q2::Eukaryotic initiation factor 4A-III ::ATP-dependent RNA helicase. Component of a splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of a few core proteins and several more peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Core components of the EJC, that remains bound to spliced mRNAs throughout all stages of mRNA metabolism, functions to mark the position of the exon-exon junction in the mature mRNA and thereby influences downstream processes of gene expression including mRNA splicing, nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Constitutes at least part of the platform anchoring other EJC proteins to spliced mRNAs. Its RNA-dependent ATPase and RNA-helicase activities are induced by CASC3, but abolished in presence of the MAGOH/RBM8A heterodimer, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The inhibition of ATPase activity by the MAGOH/RBM8A heterodimer increases the RNA-binding affinity of the EJC. Involved in translational enhancement of spliced mRNAs after formation of the 80S ribosome complex. Binds spliced mRNA in sequence-independent manner, 20-24 nucleotides upstream of mRNA exon-exon junctions. Shows higher affinity for single-stranded RNA in an ATP-bound core EJC complex than after the ATP is hydrolyzed.::Rattus norvegicus (taxid: 10116) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::32-172 PF00270::DEAD 99.89::56-170 GO:0072686::mitotic spindle confident hh_3bor_A_1::21-171 very confident psy4698 258 Q5R5F5::Eukaryotic initiation factor 4A-I ::ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon.::Pongo abelii (taxid: 9601) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::47-255 PF00270::DEAD 99.97::71-237 GO:0072686::mitotic spindle confident hh_3bor_A_1::35-253 very confident psy7790 367 Q9V3C0::ATP-dependent RNA helicase abstrakt ::ATP-dependent RNA helicase. Is essential for the directed and fasciculated early outgrowth of the bolwig nerves, as well as for its navigation at later stages. Is required during post-transcriptional gene expression. Plays a role during morphogenetic process, apoptosis and the establishment of cell polarity.::Drosophila melanogaster (taxid: 7227) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::68-365 PF00271::Helicase_C 99.52::300-365 GO:0003677::DNA binding confident hh_2p6n_A_1::234-250,253-365 very confident psy13287 140 P23128::Putative ATP-dependent RNA helicase me31b ::Unwinds RNA in an ATP-dependent fashion.::Drosophila melanogaster (taxid: 7227) very confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.97::1-140 PF00271::Helicase_C 99.13::94-140 GO:0003723::RNA binding very confident hh_1s2m_A_1::2-140 very confident psy15610 237 Q9VHP0::ATP-dependent RNA helicase bel ::ATP-dependent RNA helicase that is essential and required for cellular function, larval growth, and for male and female fertility. Also required for RNA interference (RNAi), double-stranded RNA induces potent and specific gene silencing, by acting downstream of dsRNA internalization. RNAi is mediated by the RNA-induced silencing complex (RISC), a sequence-specific, multicomponent nuclease that destroys or silences messenger RNAs homologous to the silencing trigger.::Drosophila melanogaster (taxid: 7227) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.96::1-215 PF00271::Helicase_C 99.82::126-203 GO:0004004::ATP-dependent RNA helicase activity confident hh_2i4i_A_1::2-49,107-234 very confident psy17587 231 Q4IP34::Pre-mRNA-processing ATP-dependent RNA helicase PRP5 ::ATP-dependent RNA helicase involved spliceosome assembly and in nuclear splicing. Catalyzes an ATP-dependent conformational change of U2 snRNP. Bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA.::Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.96::5-144 PF00271::Helicase_C 99.85::40-117 GO:0005730::nucleolus confident rp_2db3_A_1::38-152 very confident psy576 159 P45818::ATP-dependent RNA helicase ROK1 ::ATP-dependent RNA helicase involved in 40S ribosomal subunit biogenesis. Required for the processing and cleavage of 35S pre-rRNA at sites A0, A1, and A2, leading to mature 18S rRNA. May also have a gene-specific regulatory function since it affects nuclear fusion by regulating KAR4 expression and contributes with KEM1 to ISP-1 sensitivity.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.96::16-153 PF00271::Helicase_C 99.87::64-141 GO:0005829::cytosol confident hh_1fuk_A_1::18-156 very confident psy6712 210 Q3B8Q2::Eukaryotic initiation factor 4A-III ::ATP-dependent RNA helicase. Component of a splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of a few core proteins and several more peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Core components of the EJC, that remains bound to spliced mRNAs throughout all stages of mRNA metabolism, functions to mark the position of the exon-exon junction in the mature mRNA and thereby influences downstream processes of gene expression including mRNA splicing, nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Constitutes at least part of the platform anchoring other EJC proteins to spliced mRNAs. Its RNA-dependent ATPase and RNA-helicase activities are induced by CASC3, but abolished in presence of the MAGOH/RBM8A heterodimer, thereby trapping the ATP-bound EJC core onto spliced mRNA in a stable conformation. The inhibition of ATPase activity by the MAGOH/RBM8A heterodimer increases the RNA-binding affinity of the EJC. Involved in translational enhancement of spliced mRNAs after formation of the 80S ribosome complex. Binds spliced mRNA in sequence-independent manner, 20-24 nucleotides upstream of mRNA exon-exon junctions. Shows higher affinity for single-stranded RNA in an ATP-bound core EJC complex than after the ATP is hydrolyzed.::Rattus norvegicus (taxid: 10116) very confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::2-193 PF00271::Helicase_C 99.85::87-164 GO:0005829::cytosol very confident hh_2j0s_A_1::2-202 very confident psy1621 224 Q5R5F5::Eukaryotic initiation factor 4A-I ::ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon.::Pongo abelii (taxid: 9601) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::1-214 PF00271::Helicase_C 99.84::108-185 GO:0005829::cytosol confident hh_1fuk_A_1::62-224 very confident psy6850 118 Q61655::ATP-dependent RNA helicase DDX19A ::ATP-dependent RNA helicase involved in mRNA export from the nucleus.::Mus musculus (taxid: 10090) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.95::1-100 PF00271::Helicase_C 99.85::1-71 GO:0005829::cytosol confident hh_3pey_A_1::1-113 very confident psy9620 453 Q8SRB2::ATP-dependent RNA helicase DBP2 ::ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::113-431 PF00271::Helicase_C 99.77::318-395 GO:0005875::microtubule associated complex confident no hit no match psy16353 132 Q14BI7::Putative ATP-dependent RNA helicase TDRD9 ::Probable ATP-binding RNA helicase which plays a central role during spermatogenesis by repressing transposable elements and prevent their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons. Its association with PIWIL4 and the piP-bodies suggests a participation in the secondary piRNAs metabolic process.::Mus musculus (taxid: 10090) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.93::8-131 PF00271::Helicase_C 99.78::32-121 GO:0010468::regulation of gene expression confident hh_2xau_A_1::14-132 very confident psy17637 150 Q5R7D1::ATP-dependent RNA helicase DDX42 ::ATP-dependent RNA helicase. Binds to partially double-stranded RNAs (dsRNAs) in order to unwind RNA secondary structures. Unwinding is promoted in the presence of single-strand binding proteins. Mediates also RNA duplex formation thereby displacing the single-strand RNA binding protein. ATP and ADP modulate its activity: ATP binding and hydrolysis by DDX42 triggers RNA strand separation, whereas the ADP-bound form of the protein triggers annealing of complementary RNA strands. Involved in the survival of cells by interacting with TP53BP2 and thereby counteracting the apoptosis-stimulating activity of TP53BP2. Relocalizes TP53BP2 to the cytoplasm.::Pongo abelii (taxid: 9601) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.96::5-141 PF00271::Helicase_C 99.88::53-129 GO:0010468::regulation of gene expression confident hh_1t5i_A_1::5-30,33-142 very confident psy3145 396 Q09903::ATP-dependent RNA helicase drs1 ::ATP-binding RNA helicase involved in ribosome assembly.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::88-278 PF00271::Helicase_C 99.78::172-249 GO:0030684::preribosome confident hh_2i4i_A_1::26-49,94-274 very confident psy18034 251 A3BT52::DEAD-box ATP-dependent RNA helicase 29 ::::Oryza sativa subsp. japonica (taxid: 39947) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.97::1-123 PF00271::Helicase_C 99.85::17-94 GO:0043234::protein complex confident hh_3i32_A_1::1-131 very confident psy9509 231 Q54BD6::Probable ATP-dependent RNA helicase ddx51 ::Probable ATP-binding RNA helicase which may be involved in ribosome biogenesis.::Dictyostelium discoideum (taxid: 44689) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::2-230 PF00271::Helicase_C 99.85::147-218 GO:0043234::protein complex confident hh_2i4i_A_1::22-54,81-136,147-231 very confident psy14082 233 Q8SRB2::ATP-dependent RNA helicase DBP2 ::ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::1-218 PF00271::Helicase_C 99.59::124-196 GO:0044428::nuclear part confident hh_3pey_A_1::2-36,42-200,202-216 very confident psy16582 109 B3DLA6::Endoribonuclease Dicer ::Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of dicer1, eif2c2/ago2 and tarbp2. Within the RLC/miRLC, dicer1 and tarbp2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto eif2c2/ago2. eif2c2/ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from dicer1 and tarbp2. Also cleaves double-stranded RNA to produce short interfering RNAs (siRNAs) which target the selective destruction of complementary RNAs.::Xenopus tropicalis (taxid: 8364) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.87::1-69 PF00271::Helicase_C 99.80::1-58 GO:0070883::pre-miRNA binding confident hh_2ykg_A_1::1-53,55-57,59-72 very confident psy16606 109 B3DLA6::Endoribonuclease Dicer ::Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of dicer1, eif2c2/ago2 and tarbp2. Within the RLC/miRLC, dicer1 and tarbp2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto eif2c2/ago2. eif2c2/ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from dicer1 and tarbp2. Also cleaves double-stranded RNA to produce short interfering RNAs (siRNAs) which target the selective destruction of complementary RNAs.::Xenopus tropicalis (taxid: 8364) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.87::1-69 PF00271::Helicase_C 99.80::1-58 GO:0070883::pre-miRNA binding confident hh_2ykg_A_1::1-53,55-57,59-72 very confident psy15269 1858 Q15751::Probable E3 ubiquitin-protein ligase HERC1 ::Involved in membrane trafficking via some guanine nucleotide exchange factor (GEF) activity and its ability to bind clathrin. Acts as a GEF for Arf and Rab, by exchanging bound GDP for free GTP. Binds phosphatidylinositol 4,5-bisphosphate, which is required for GEF activity. May also act as a E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.::Homo sapiens (taxid: 9606) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::840-1204 PF00622::SPRY 99.67::1449-1570 GO:0031965::nuclear membrane confident hh_3mvd_K_1::180-266,270-315,319-392,394-420,424-471,473-511,513-542 very confident psy8719 33 Q641Y8::ATP-dependent RNA helicase DDX1 ::Acts as an ATP-dependent RNA helicase, able to unwind both RNA-RNA and RNA-DNA duplexes. Possesses 5' single-stranded RNA overhang nuclease activity. Possesses ATPase activity on various RNA, but not DNA polynucleotides. May play a role in RNA clearance at DNA double-strand breaks (DSBs), thereby facilitating the template-guided repair of transcriptionally active regions of the genome. Together with RELA, acts as a coactivator to enhance NF-kappa-B-mediated transcriptional activation. Acts as a positive transcriptional regulator of cyclin CCND2 expression. Binds to the cyclin CCND2 promoter region. Associates with chromatin at the NF-kappa-B promoter region via association with RELA. Binds to poly(A) RNA. May be involved in 3'-end cleavage and polyadenylation of pre-mRNAs.::Rattus norvegicus (taxid: 10116) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 97.76::2-27 PF05939::Phage_min_tail 95.24::4-33 GO:0003712::transcription cofactor activity confident hh_2d7d_A_1::2-30 confident psy16310 1493 Q4WMS3::ATP-dependent RNA helicase mak5 ::ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits and is required for the normal formation of 25S and 5.8S rRNAs.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::768-1200 PF06862::DUF1253 99.88::248-659 GO:0005737::cytoplasm confident hh_2i4i_A_1::764-800,802-838,855-862,868-946,950-984,986-1010,1035-1198 very confident psy9627 129 Q5B0J9::ATP-dependent RNA helicase dbp2 ::ATP-dependent RNA helicase involved nonsense-mediated mRNA decay and ribosome biogenesis through rRNA processing.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.93::1-128 PF06862::DUF1253 97.62::13-127 GO:0005829::cytosol confident rp_2db3_A_1::8-47,49-76,81-126 very confident psy17636 222 Q5R7D1::ATP-dependent RNA helicase DDX42 ::ATP-dependent RNA helicase. Binds to partially double-stranded RNAs (dsRNAs) in order to unwind RNA secondary structures. Unwinding is promoted in the presence of single-strand binding proteins. Mediates also RNA duplex formation thereby displacing the single-strand RNA binding protein. ATP and ADP modulate its activity: ATP binding and hydrolysis by DDX42 triggers RNA strand separation, whereas the ADP-bound form of the protein triggers annealing of complementary RNA strands. Involved in the survival of cells by interacting with TP53BP2 and thereby counteracting the apoptosis-stimulating activity of TP53BP2. Relocalizes TP53BP2 to the cytoplasm.::Pongo abelii (taxid: 9601) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.97::58-222 PF06862::DUF1253 96.53::114-218 GO:0005829::cytosol confident hh_3fe2_A_1::31-146 very confident psy12699 1269 Q80YD1::ATP-dependent RNA helicase SUPV3L1, mitochondrial ::Major helicase player in mitochondrial RNA metabolism. Component of the mitochondrial degradosome (mtEXO) complex, that degrades 3' overhang double-stranded RNA with a 3'-to-5' directionality in an ATP-dependent manner. ATPase and ATP-dependent multisubstrate helicase, able to unwind double stranded (ds) DNA and RNA, and RNA/DNA heteroduplexes in the 5'-to-3' direction. Plays a role in the RNA surveillance system in mitochondria; regulates the stability of mature mRNAs, the removal of aberrantly formed mRNAs and the rapid degradation of non coding processing intermediates. Also implicated in recombination and chromatin maintenance pathways. May protect cells from apoptosis. Associates with mitochondrial DNA.::Mus musculus (taxid: 10090) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 100.00::821-1162 PF08449::UAA 99.93::77-357 GO:0005459::UDP-galactose transmembrane transporter activity confident hh_3rc3_A_1::511-538,540-571,626-632,718-814,846-1015,1067-1153,1194-1258,1260-1269 very confident psy17913 121 Q6FP38::ATP-dependent RNA helicase DBP1 ::ATP-binding RNA helicase involved in translation initiation. Remodels RNA in response to ADP and ATP concentrations by facilitating disruption, but also formation of RNA duplexes. Redundant to DED1, may be required in conditions in which DED1 expression is decreased.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) portable COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 95.11::1-42 PF14475::Mso1_Sec1_bdg 92.38::16-40 GO:0005634::nucleus confident hh_2jgn_A_1::2-47 confident psy7788 115 Q9V3C0::ATP-dependent RNA helicase abstrakt ::ATP-dependent RNA helicase. Is essential for the directed and fasciculated early outgrowth of the bolwig nerves, as well as for its navigation at later stages. Is required during post-transcriptional gene expression. Plays a role during morphogenetic process, apoptosis and the establishment of cell polarity.::Drosophila melanogaster (taxid: 7227) confident COG0513::SrmB Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis] 99.19::1-56 no hit no match GO:0070887::cellular response to chemical stimulus confident hh_2p6n_A_1::1-60 very confident psy7952 444 O34748::Probable ATP-dependent DNA helicase RecQ ::Probable DNA helicase. Required for DNA repair and intramolecular recombination; probably has overlapping function with recS (AC P50729). It probably acts to help generate ss-DNA from ds-DNA breaks.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG0514::RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] 100.00::35-444 PF00270::DEAD 99.88::51-241 GO:0043234::protein complex confident hh_2v1x_A_1::18-50,52-64,66-81,90-94,99-105,109-118,124-133,137-227,229-256,258-278,282-297,299-410,419-432 very confident psy4493 323 Q9TXJ8::Putative ATP-dependent DNA helicase Q1 ::DNA helicase that may play a role in the repair of DNA that is damaged by ultraviolet light or other mutagens. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction.::Caenorhabditis elegans (taxid: 6239) portable COG0514::RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] 100.00::10-322 PF00270::DEAD 99.69::25-186 GO:0043234::protein complex confident hh_2v1x_A_1::4-54,71-72,76-322 very confident psy7792 138 Q9V3C0::ATP-dependent RNA helicase abstrakt ::ATP-dependent RNA helicase. Is essential for the directed and fasciculated early outgrowth of the bolwig nerves, as well as for its navigation at later stages. Is required during post-transcriptional gene expression. Plays a role during morphogenetic process, apoptosis and the establishment of cell polarity.::Drosophila melanogaster (taxid: 7227) confident COG0514::RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] 99.86::1-61 PF00271::Helicase_C 99.51::1-42 GO:0003677::DNA binding confident hh_2p6n_A_1::1-81 very confident psy7959 101 P40724::ATP-dependent DNA helicase RecQ ::Involved in the recF recombination pathway; its gene expression is under the regulation of the SOS system. It is a DNA helicase.::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) confident COG0514::RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] 99.85::1-98 PF00271::Helicase_C 99.59::2-49 GO:0043140::ATP-dependent 3'-5' DNA helicase activity confident hh_1oyw_A_1::2-77,80-98 very confident psy437 184 O18017::Bloom syndrome protein homolog ::Participates in DNA replication and repair. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction.::Caenorhabditis elegans (taxid: 6239) confident COG0514::RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] 99.97::1-178 PF00271::Helicase_C 99.31::52-133 GO:0043234::protein complex confident hh_1oyw_A_1::2-31,33-94,101-110,112-134 very confident psy10478 451 Q14191::Werner syndrome ATP-dependent helicase ::Multifunctional enzyme that has both magnesium and ATP-dependent DNA-helicase activity and 3'->5' exonuclease activity towards double-stranded DNA with a 5'-overhang. Has no nuclease activity towards single-stranded DNA or blunt-ended double-stranded DNA. Binds preferentially to DNA substrates containing alternate secondary structures, such as replication forks and Holliday junctions. May play an important role in the dissociation of joint DNA molecules that can arise as products of homologous recombination, at stalled replication forks or during DNA repair. Alleviates stalling of DNA polymerases at the site of DNA lesions. Important for genomic integrity. Plays a role in the formation of DNA replication focal centers; stably associates with foci elements generating binding sites for RP-A.::Homo sapiens (taxid: 9606) portable COG0514::RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] 100.00::12-450 PF00271::Helicase_C 99.76::249-326 GO:0043234::protein complex confident hh_2v1x_A_1::36-86,127-228,230-350,358-393,399-410,427-429,435-450 very confident psy4494 234 Q9TXJ8::Putative ATP-dependent DNA helicase Q1 ::DNA helicase that may play a role in the repair of DNA that is damaged by ultraviolet light or other mutagens. Exhibits a magnesium-dependent ATP-dependent DNA-helicase activity that unwinds single- and double-stranded DNA in a 3'-5' direction.::Caenorhabditis elegans (taxid: 6239) portable COG0514::RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair] 100.00::10-227 PF00271::Helicase_C 99.48::94-153 GO:0043234::protein complex confident hh_2v1x_A_1::13-33,35-36,40-226,228-234 very confident psy3914 852 Q96KG9::N-terminal kinase-like protein ::Isoform 6 acts as transcriptional activator. It binds to three different types of GC-rich DNA binding sites (box-A, -B and -C) in the beta-polymerase promoter region. It also binds to the TERT promoter region.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.79::56-306 PF00069::Pkinase 100.00::56-314 GO:0000049::tRNA binding confident hh_2w5a_A_1::53-63,72-178,180-216,221-306 very confident psy1546 604 Q9Y6E0::Serine/threonine-protein kinase 24 ::Serine/threonine-protein kinase that acts on both serine and threonine residues and promotes apoptosis in response to stress stimuli and caspase activation. Mediates oxidative-stress-induced cell death by modulating phosphorylation of JNK1-JNK2 (MAPK8 and MAPK9), p38 (MAPK11, MAPK12, MAPK13 and MAPK14) during oxidative stress. Plays a role in a staurosporine-induced caspase-independent apoptotic pathway by regulating the nuclear translocation of AIFM1 and ENDOG and the DNase activity associated with ENDOG. Phosphorylates STK38L on 'Thr-442' and stimulates its kinase activity. Regulates cellular migration with alteration of PTPN12 activity and PXN phosphorylation: phosphorylates PTPN12 and inhibits its activity and may regulate PXN phosphorylation through PTPN12. May act as a key regulator of axon regeneration in the optic nerve and radial nerve.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::59-301 PF00069::Pkinase 100.00::59-299 GO:0000287::magnesium ion binding confident hh_3a7i_A_1::51-323 very confident psy11523 147 O94751::Checkpoint serine/threonine-protein kinase bub1 ::Involved in cell cycle checkpoint enforcement. Acts to stabilize the spindle during mitosis. Required for the correct localization of bub3 and mad3 to the kinetochore. Appears to have a role in chromosome segregation. Catalyzes the phosphorylation of bub3.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.29::7-71 PF00069::Pkinase 99.11::4-106 GO:0000780::condensed nuclear chromosome, centromeric region confident hh_3e7e_A_1::5-130,134-142 very confident psy8571 109 P20594::Atrial natriuretic peptide receptor 2 ::Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.44::2-99 PF00069::Pkinase 99.83::1-100 GO:0004383::guanylate cyclase activity confident hh_3s95_A_1::1-10,12-70,75-99 very confident psy3182 255 P00516::cGMP-dependent protein kinase 1 ::Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.76::64-253 PF00069::Pkinase 99.94::62-253 GO:0004672::protein kinase activity confident hh_3a62_A_1::61-112,124-164,193-253 very confident psy17952 804 P46549::Serine/threonine-protein kinase SULU ::::Caenorhabditis elegans (taxid: 6239) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::164-494 PF00069::Pkinase 100.00::164-491 GO:0004672::protein kinase activity confident hh_1u5q_A_1::143-253,287-412,454-527 very confident psy6046 379 Q8VDF3::Death-associated protein kinase 2 ::Calcium/calmodulin-dependent serine/threonine kinase involved in multiple cellular signaling pathways that trigger cell survival, apoptosis, and autophagy. Capable of regulating both type I apoptotic and type II autophagic cell deaths signal. The former involves caspase activation, chromatin and mitochondrial condensation while the latter involves caspase-independent cell death in conjunction with accumulation of mature autophagic vesicles, plasma membrane blebs, and nuclear condensation without DNA degradation. Mediator of anoikis and a suppressor of beta-catenin-dependent anchorage-independent growth of malignant epithelial cells. May play a role in granulocytic maturation.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.72::9-228 PF00069::Pkinase 100.00::8-224 GO:0004672::protein kinase activity confident hh_2w4o_A_1::9-91,98-228 very confident psy8010 87 Q9GM70::Serine/threonine-protein kinase 17A ::Acts as a positive regulator of apoptosis. May also act as a regulator of cellular reactive oxygen species.::Oryctolagus cuniculus (taxid: 9986) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.03::14-87 PF00069::Pkinase 99.44::10-87 GO:0004672::protein kinase activity confident hh_3i6u_A_1::12-27,30-87 very confident psy16752 284 O54781::SRSF protein kinase 2 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.68::78-254 PF00069::Pkinase 99.92::78-252 GO:0004674::protein serine/threonine kinase activity confident hh_1wak_A_1::43-232,236-254 very confident psy9736 400 P35465::Serine/threonine-protein kinase PAK 1 ::The activated kinase acts on a variety of targets. Likely to be the GTPase effector that links the Rho-related GTPases to the JNK MAP kinase pathway. Activated by CDC42 and RAC1. Involved in dissolution of stress fibers and reorganization of focal complexes. Involved in regulation of microtubule biogenesis through phosphorylation of TBCB. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ). Activity is inhibited in cells undergoing apoptosis, potentially due to binding of CDC2L1 and CDC2L2. Phosphorylates MYL9/MLC2 (By similarity). Phosphorylates RAF1 at 'Ser-338' and 'Ser-339' resulting in: activation of RAF1, stimulation of RAF1 translocation to mitochondria, phosphorylation of BAD by RAF1, and RAF1 binding to BCL2.::Rattus norvegicus (taxid: 10116) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.79::1-382 PF00069::Pkinase 100.00::1-377 GO:0004674::protein serine/threonine kinase activity confident rp_3fxz_A_1::26-131 very confident psy3151 372 P49138::MAP kinase-activated protein kinase 2 ::Stress-activated serine/threonine-protein kinase involved in cytokines production, endocytosis, reorganization of the cytoskeleton, cell migration, cell cycle control, chromatin remodeling, DNA damage response and transcriptional regulation. Following stress, it is phosphorylated and activated by MAP kinase p38-alpha/MAPK14, leading to phosphorylation of substrates. Phosphorylates serine in the peptide sequence, Hyd-X-R-X(2)-S, where Hyd is a large hydrophobic residue. Phosphorylates ALOX5, CDC25B, CDC25C, ELAVL1, HNRNPA0, HSF1, HSP27/HSPB1, KRT18, KRT20, LIMK1, LSP1, PABPC1, PARN, PDE4A, RCSD1, RPS6KA3, TAB3 and TTP/ZFP36. Mediates phosphorylation of HSP27/HSPB1 in response to stress, leading to dissociate HSP27/HSPB1 from large small heat-shock protein (sHsps) oligomers and impair their chaperone activities and ability to protect against oxidative stress effectively. Involved in inflammatory response by regulating tumor necrosis factor (TNF) and IL6 production post-transcriptionally: acts by phosphorylating AU-rich elements (AREs)-binding proteins ELAVL1, HNRNPA0, PABPC1 and TTP/ZFP36, leading to regulate the stability and translation of TNF and IL6 mRNAs. Phosphorylation of TTP/ZFP36, a major post-transcriptional regulator of TNF, promotes its binding to 14-3-3 proteins and reduces its ARE mRNA affinity leading to inhibition of dependent degradation of ARE-containing transcript. Also involved in late G2/M checkpoint following DNA damage through a process of post-transcriptional mRNA stabilization: following DNA damage, relocalizes from nucleus to cytoplasm and phosphorylates HNRNPA0 and PARN, leading to stabilize GADD45A mRNA. Involved in toll-like receptor signaling pathway (TLR) in dendritic cells: required for acute TLR-induced macropinocytosis by phosphorylating and activating RPS6KA3.::Mus musculus (taxid: 10090) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::17-307 PF00069::Pkinase 100.00::17-304 GO:0004674::protein serine/threonine kinase activity confident hh_1nxk_A_1::10-152,177-194,196-369 very confident psy17600 351 Q2LZZ7::Serine/threonine-protein kinase tricorner ::Has an important role, with fry, in controlling cell structure and proliferation of a variety of polarized outgrowths including epidermal hairs, bristles, arista laterals, and dendrites. Affects cellular morphogenesis by regulating the expression of target genes that encode cytoskeleton-interacting proteins and not via the direct modification of the cytoskeleton. Maintains the integrity of epidermal hairs and is an essential component of the signaling pathway regulating dendritic branching of sensory neurons.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.42::7-91 PF00069::Pkinase 99.78::5-91 GO:0004674::protein serine/threonine kinase activity confident hh_1o6l_A_1::4-132,135-142,145-174,178-215 very confident psy16751 214 Q5RD27::SRSF protein kinase 1 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Plays a central role in the regulatory network for splicing, controlling the intranuclear distribution of splicing factors in interphase cells and the reorganization of nuclear speckles during mitosis. Can influence additional steps of mRNA maturation, as well as other cellular activities, such as chromatin reorganization in somatic and sperm cells and cell cycle progression. Phosphorylates SFRS2, ZRSR2, LBR and PRM1. Phosphorylates SRSF1 using a directional (C-terminal to N-terminal) and a dual-track mechanism incorporating both processive phosphorylation (in which the kinase stays attached to the substrate after each round of phosphorylation) and distributive phosphorylation steps (in which the kinase and substrate dissociate after each phosphorylation event). The RS domain of SRSF1 binds first to a docking groove in the large lobe of the kinase domain of SRPK1. This induces certain structural changes in SRPK1 and/or RRM2 domain of SRSF1, allowing RRM2 to bind the kinase and initiate phosphorylation. The cycles continue for several phosphorylation steps in a processive manner (steps 1-8) until the last few phosphorylation steps (approximately steps 9-12). During that time, a mechanical stress induces the unfolding of the beta-4 motif in RRM2, which then docks at the docking groove of SRPK1. This also signals RRM2 to begin to dissociate, which facilitates SRSF1 dissociation after phosphorylation is completed. Can mediate hepatitis B virus (HBV) core protein phosphorylation. It plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles. Can induce splicing of exon 10 in MAPT/TAU.::Pongo abelii (taxid: 9601) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.40::28-212 PF00069::Pkinase 99.93::3-212 GO:0004674::protein serine/threonine kinase activity confident hh_1q8y_A_1::29-214 very confident psy11119 407 Q8AYC9::Serine/threonine-protein kinase Chk1 ::Serine/threonine-protein kinase which is required for checkpoint-mediated cell cycle arrest and activation of DNA repair in response to the presence of DNA damage or unreplicated DNA. May also negatively regulate cell cycle progression during unperturbed cell cycles. This regulation is achieved by a number of mechanisms that together help to preserve the integrity of the genome. Recognizes the substrate consensus sequence [R-X-X-S/T]. Binds to and phosphorylates CDC25A, CDC25B and CDC25C. This inhibits their activity through proteasomal degradation, nucleo-cytoplasmic shuttling and inhibition by proteins of the 13-3-3 family. Inhibition of CDC25 leads to increased inhibitory tyrosine phosphorylation of CDK-cyclin complexes and blocks cell cycle progression. May promote DNA repair, regulate chromatin assembly and the transcription of genes that regulate cell-cycle progression. May also play a role in replication fork maintenance.::Gallus gallus (taxid: 9031) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.75::1-167 PF00069::Pkinase 99.96::1-164 GO:0004679::AMP-activated protein kinase activity confident hh_2i0e_A_1::1-57,60-121,124-126,129-181 very confident psy3880 408 Q9DB30::Phosphorylase b kinase gamma catalytic chain, liver/testis isoform ::Catalytic subunit of the phosphorylase b kinase (PHK), which mediates the neural and hormonal regulation of glycogen breakdown (glycogenolysis) by phosphorylating and thereby activating glycogen phosphorylase (PYGB, PYGL or PYGM). May regulate glycogeneolysis in the testis. In vitro, phosphorylates TNNI3, TNNT2, MAPT/TAU, GAP43 and NRGN/RC3.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.74::7-152 PF00069::Pkinase 99.97::7-279 GO:0004689::phosphorylase kinase activity confident hh_2y7j_A_1::8-35,38-151,222-280 very confident psy6390 197 P29618::Cyclin-dependent kinase A-1 ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.25::11-186 PF00069::Pkinase 99.93::8-184 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_1ob3_A_1::9-187 very confident psy6044 282 P48609::Cyclin-dependent kinase 5 homolog ::Probably involved in the control of the cell cycle. Interacts with D1 and D3-type G1 cyclins. Possible regulator of neuronal differentiation and/or development.::Drosophila melanogaster (taxid: 7227) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::2-274 PF00069::Pkinase 100.00::2-269 GO:0004693::cyclin-dependent protein serine/threonine kinase activity very confident hh_1ob3_A_1::2-7,9-184,186-273 very confident psy9859 78 P50613::Cyclin-dependent kinase 7 ::Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 95.45::1-66 PF00069::Pkinase 98.80::1-65 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_1ua2_A_1::1-49,51-66 very confident psy763 303 Q3TZA2::Cyclin-dependent kinase-like 4 ::::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.82::17-178 PF00069::Pkinase 100.00::22-275 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident rp_4agu_A_1::29-160 very confident psy2676 321 Q64261::Cyclin-dependent kinase 6 ::Serine/threonine-protein kinase involved in the control of the cell cycle and differentiation; promotes G1/S transition. Phosphorylates pRB/RB1 and NPM1. Interacts with D-type G1 cyclins during interphase at G1 to form a pRB/RB1 kinase and controls the entrance into the cell cycle. Involved in initiation and maintenance of cell cycle exit during cell differentiation; prevents cell proliferation and regulates negatively cell differentiation, but is required for the proliferation of specific cell types (e.g. erythroid and hematopoietic cells). Essential for cell proliferation within the dentate gyrus of the hippocampus and the subventricular zone of the lateral ventricles. Required during thymocyte development. Promotes the production of newborn neurons, probably by modulating G1 length. Promotes, at least in astrocytes, changes in patterns of gene expression, changes in the actin cytoskeleton including loss of stress fibers, and enhanced motility during cell differentiation. Prevents myeloid differentiation by interfering with RUNX1 and reducing its transcription transactivation activity, but promotes proliferation of normal myeloid progenitors. Delays senescence. Promotes the proliferation of beta-cells in pancreatic islets of Langerhans.::Mus musculus (taxid: 10090) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::24-316 PF00069::Pkinase 100.00::24-313 GO:0004693::cyclin-dependent protein serine/threonine kinase activity very confident hh_3g33_A_1::18-43,45-97,100-319 very confident psy13250 224 Q7XUF4::Cyclin-dependent kinase G-2 ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.81::75-222 PF00069::Pkinase 99.96::75-221 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_2i0e_A_1::71-140,143-164,166-221 very confident psy9855 470 Q9UQ07::MAPK/MAK/MRK overlapping kinase ::Able to phosphorylate several exogenous substrates and to undergo autophosphorylation.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.85::10-313 PF00069::Pkinase 100.00::13-311 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_2w4o_A_1::9-24,26-38,41-72,132-201,203-242,261-261,271-315 very confident psy11805 251 E9PT87::Myosin light chain kinase 3 ::Calmodulin-dependent kinase that phosphorylates MYL2 in vitro. Promotes sarcomere formation in cardiomyocytes. Increases cardiomyocyte contractility.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::5-250 PF00069::Pkinase 100.00::5-251 GO:0005509::calcium ion binding confident hh_2y0a_A_1::2-94,96-134,137-251 very confident psy1620 308 Q61846::Maternal embryonic leucine zipper kinase ::Serine/threonine-protein kinase involved in various processes such as cell cycle regulation, self-renewal of stem cells, apoptosis and splicing regulation. Has a broad substrate specificity; phosphorylates BCL2L14, CDC25B, MAP3K5/ASK1 and ZNF622. Acts as an activator of apoptosis by phosphorylating and activating MAP3K5/ASK1. Acts as a regulator of cell cycle, notably by mediating phosphorylation of CDC25B, promoting localization of CDC25B to the centrosome and the spindle poles during mitosis. Plays a key role in cell proliferation. Required for proliferation of embryonic and postnatal multipotent neural progenitors. Phosphorylates and inhibits BCL2L14. Also involved in the inhibition of spliceosome assembly during mitosis by phosphorylating ZNF622, thereby contributing to its redirection to the nucleus. May also play a role in primitive hematopoiesis.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.71::144-291 PF00069::Pkinase 99.93::144-298 GO:0005509::calcium ion binding confident rp_3fe3_A_1::143-268 very confident psy12709 253 Q8BG48::Serine/threonine-protein kinase 17B ::Acts as a positive regulator of apoptosis.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::13-253 PF00069::Pkinase 100.00::13-253 GO:0005509::calcium ion binding confident hh_2y0a_A_1::7-12,15-65,67-253 very confident psy10194 357 Q9D411::Testis-specific serine/threonine-protein kinase 4 ::May be involved in a signaling pathway during male germ cell development or mature sperm function. Phosphorylates CREB1 on Ser-133 and stimulates downstream signaling.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::45-307 PF00069::Pkinase 100.00::45-304 GO:0005524::ATP binding confident hh_2w4o_A_1::41-81,87-196,204-226,228-309 very confident psy3663 259 Q8VDU5::SNF-related serine/threonine-protein kinase ::May play a role in hematopoietic cell proliferation or differentiation. Potential mediator of neuronal apoptosis.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::20-236 PF00069::Pkinase 100.00::20-232 GO:0005634::nucleus confident hh_3fe3_A_1::5-113,115-154,156-239 very confident psy16343 539 Q5U2N4::MAP kinase-interacting serine/threonine-protein kinase 2 ::Serine/threonine-protein kinase that phosphorylates SFPQ/PSF, HNRNPA1 and EIF4E. May play a role in the response to environmental stress and cytokines. Appears to regulate translation by phosphorylating EIF4E, thus increasing the affinity of this protein for the 7-methylguanosine-containing mRNA cap. Required for mediating PP2A-inhibition-induced EIF4E phosphorylation. Triggers EIF4E shuttling from cytoplasm to nucleus. Enhances the formation of EIF4F complex in pachytene spermatocytes, thus promoting mRNA translation during spermatogenesis. Displays a high basal kinase activity. Acts as a mediator of the suppressive effects of IFNgamma on hematopoiesis. Negative regulator for signals that control generation of arsenic trioxide As(2)O(3)-dependent apoptosis and anti-leukemic responses. Involved in anti-apoptotic signaling in response to serum withdrawal.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.81::53-426 PF00069::Pkinase 100.00::49-423 GO:0005635::nuclear envelope confident bp_2ac3_A_2::252-292,294-319,321-430,432-441 very confident psy13988 358 E1BB52::Cyclin-dependent kinase 13 ::Cyclin-dependent kinase which displays CTD kinase activity and is required for RNA splicing. Has CTD kinase activity by hyperphosphorylating the C-terminal heptapeptide repeat domain (CTD) of the largest RNA polymerase II subunit RPB1, thereby acting as a key regulator of transcription elongation. Required for RNA splicing, probably by phosphorylating SRSF1/SF2. Required during hematopoiesis.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::148-358 PF00069::Pkinase 100.00::148-358 GO:0005703::polytene chromosome puff very confident hh_1ob3_A_1::146-167,169-216,227-310,313-358 very confident psy17426 224 Q13523::Serine/threonine-protein kinase PRP4 homolog ::Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.38::26-111 PF00069::Pkinase 99.93::25-220 GO:0005730::nucleolus confident hh_2vx3_A_1::25-151,153-157,161-223 very confident psy7384 463 Q9UKE5::TRAF2 and NCK-interacting protein kinase ::Serine/threonine kinase that acts as an essential activator of the Wnt signaling pathway. Recruited to promoters of Wnt target genes and required to activate their expression. May act by phosphorylating TCF4/TCF7L2. Appears to act upstream of the JUN N-terminal pathway. May play a role in the response to environmental stress. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it may play a role in cytoskeletal rearrangements and regulate cell spreading. Phosphorylates SMAD1 on Thr-322.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::57-323 PF00069::Pkinase 100.00::57-321 GO:0005730::nucleolus very confident hh_2x7f_A_1::51-350 very confident psy7276 101 no hit no match COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.02::6-92 PF00069::Pkinase 99.60::3-89 GO:0005730::nucleolus very confident no hit no match psy7274 308 no hit no match COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.50::5-183 PF00069::Pkinase 99.92::6-180 GO:0005730::nucleolus very confident hh_3qyz_A_1::6-18,26-183,264-305 very confident psy12288 393 O54781::SRSF protein kinase 2 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.87::30-389 PF00069::Pkinase 100.00::30-386 GO:0005737::cytoplasm confident hh_1q8y_A_1::11-89,93-183,221-390 very confident psy12077 670 P12036::Neurofilament heavy polypeptide ::Neurofilaments usually contain three intermediate filament proteins: L, M, and H which are involved in the maintenance of neuronal caliber. NF-H has an important function in mature axons that is not subserved by the two smaller NF proteins.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.65::456-647 PF00069::Pkinase 99.88::456-646 GO:0005737::cytoplasm confident hh_3fe3_A_1::453-524,526-600,603-659 very confident psy2485 85 P51955::Serine/threonine-protein kinase Nek2 ::Protein kinase which is involved in the control of centrosome separation and bipolar spindle formation in mitotic cells and chromatin condensation in meiotic cells. Regulates centrosome separation (essential for the formation of bipolar spindles and high-fidelity chromosome separation) by phosphorylating centrosomal proteins such as CROCC, CEP250 and NINL, resulting in their displacement from the centrosomes. Regulates kinetochore microtubule attachment stability in mitosis via phosphorylation of NDC80. Involved in regulation of mitotic checkpoint protein complex via phosphorylation of CDC20 and MAD2L1. Plays an active role in chromatin condensation during the first meiotic division through phosphorylation of HMGA2. Phosphorylates: PPP1CC; SGOL1; NECAB3 and NPM1. Essential for localization of MAD2L1 to kinetochore and MAPK1 and NPM1 to the centrosome. Isoform 1 phosphorylates and activates NEK11 in G1/S-arrested cells. Isoform 2, which is not present in the nucleolus, does not.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.89::12-85 PF00069::Pkinase 99.44::9-85 GO:0005813::centrosome confident hh_2w5a_A_1::12-85 very confident psy9042 245 O14965::Aurora kinase A ::Mitotic serine/threonine kinases that contributes to the regulation of cell cycle progression. Associates with the centrosome and the spindle microtubules during mitosis and plays a critical role in various mitotic events including the establishment of mitotic spindle, centrosome duplication, centrosome separation as well as maturation, chromosomal alignment, spindle assembly checkpoint, and cytokinesis. Required for initial activation of CDK1 at centrosomes. Phosphorylates numerous target proteins, including ARHGEF2, BORA, BRCA1, CDC25B, DLGP5, HDAC6, KIF2A, LATS2, NDEL1, PARD3, PPP1R2, PLK1, RASSF1, TACC3, p53/TP53 and TPX2. Regulates KIF2A tubulin depolymerase activity. Required for normal axon formation. Plays a role in microtubule remodeling during neurite extension. Important for microtubule formation and/or stabilization. Also acts as a key regulatory component of the p53/TP53 pathway, and particularly the checkpoint-response pathways critical for oncogenic transformation of cells, by phosphorylating and stabilizating p53/TP53. Phosphorylates its own inhibitors, the protein phosphatase type 1 (PP1) isoforms, to inhibit their activity. Necessary for proper cilia disassembly prior to mitosis.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.43::98-229 PF00069::Pkinase 99.86::98-226 GO:0005819::spindle confident hh_3fdn_A_1::90-173,175-209,211-229 very confident psy12748 125 E1BFR5::Serine/threonine-protein kinase greatwall ::Serine/threonine kinase that plays a key role in M phase by acting as a regulator of mitosis entry and maintenance. Acts by promoting the inactivation of protein phosphatase 2A (PP2A) during M phase: does not directly inhibit PP2A but acts by mediating phosphorylation and subsequent activation of ARPP19 and ENSA at 'Ser-62' and 'Ser-67', respectively. ARPP19 and ENSA are phosphatase inhibitors that specifically inhibit the PPP2R2D (PR55-delta) subunit of PP2A. Inactivation of PP2A during M phase is essential to keep cyclin-B1-CDK1 activity high. Following DNA damage, it is also involved in checkpoint recovery by being inhibited.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 96.96::2-80 PF00069::Pkinase 99.42::2-79 GO:0005829::cytosol confident hh_2i0e_A_1::2-43,47-101,103-115 very confident psy8825 92 P05130::Protein kinase C, brain isozyme ::PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.::Drosophila melanogaster (taxid: 7227) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.23::6-83 PF00069::Pkinase 99.18::2-70 GO:0005829::cytosol very confident hh_2i0e_A_1::2-91 very confident psy3714 467 P19454::Casein kinase II subunit alpha' ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. The alpha and alpha' chains contain the catalytic site. May play a role in cell proliferation. Required for cell viability.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.87::173-442 PF00069::Pkinase 100.00::173-438 GO:0005829::cytosol confident rp_3nsz_A_2::10-142 very confident psy6391 313 P23572::Cyclin-dependent kinase 1 ::Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. p34 is a component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.::Drosophila melanogaster (taxid: 7227) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.92::16-303 PF00069::Pkinase 100.00::16-300 GO:0005829::cytosol very confident hh_1ob3_A_1::13-35,37-106,109-153,155-303 very confident psy6406 223 P24583::Protein kinase C-like 1 ::Required for cell growth and for the G2->M transition of the cell division cycle. Mediates a protein kinase cascade; it activates BCK1 which itself activates MKK1/MKK2.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.60::10-119 PF00069::Pkinase 99.88::4-117 GO:0005829::cytosol confident hh_1o6l_A_1::3-116 very confident psy3273 145 P26818::Beta-adrenergic receptor kinase 2 ::Specifically phosphorylates the agonist-occupied form of the beta-adrenergic and closely related receptors, probably inducing a desensitization of them.::Bos taurus (taxid: 9913) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.60::2-136 PF00069::Pkinase 99.93::2-133 GO:0005829::cytosol confident hh_4g3f_A_1::2-136 very confident psy10954 562 P29618::Cyclin-dependent kinase A-1 ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.87::17-352 PF00069::Pkinase 100.00::21-349 GO:0005829::cytosol confident hh_1ob3_A_1::16-128,220-352 very confident psy48 1098 P39009::DNA damage response protein kinase DUN1 ::Transducer of the DNA damage signal. Phosphorylates SML1 on serine residues. Cooperates with the PAN deadenylation complex in the regulation of RAD5 mRNA levels and cell survival in response to replicational stress.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.83::814-1061 PF00069::Pkinase 100.00::814-1059 GO:0005829::cytosol confident hh_2w4o_A_1::811-848,853-904,906-1062 very confident psy9347 105 P46197::Atrial natriuretic peptide receptor 2 ::Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.::Bos taurus (taxid: 9913) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.34::2-99 PF00069::Pkinase 99.78::1-98 GO:0005829::cytosol confident hh_2qol_A_1::1-9,11-65,71-98 very confident psy14632 68 P47809::Dual specificity mitogen-activated protein kinase kinase 4 ::Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K7/MKK7, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The phosphorylation of the Thr residue by MAP2K7/MKK7 seems to be the prerequisite for JNK activation at least in response to proinflammatory cytokines, while other stimuli activate both MAP2K4/MKK4 and MAP2K7/MKK7 which synergistically phosphorylate JNKs. MAP2K4 is required for maintaining peripheral lymphoid homeostasis. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis. Whereas MAP2K7/MKK7 exclusively activates JNKs, MAP2K4/MKK4 additionally activates the p38 MAPKs MAPK11, MAPK12, MAPK13 and MAPK14.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.35::3-56 PF00069::Pkinase 98.94::3-52 GO:0005829::cytosol confident rp_3aln_A_1::7-54 very confident psy14630 187 P47809::Dual specificity mitogen-activated protein kinase kinase 4 ::Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Essential component of the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. With MAP2K7/MKK7, is the one of the only known kinase to directly activate the stress-activated protein kinase/c-Jun N-terminal kinases MAPK8/JNK1, MAPK9/JNK2 and MAPK10/JNK3. MAP2K4/MKK4 and MAP2K7/MKK7 both activate the JNKs by phosphorylation, but they differ in their preference for the phosphorylation site in the Thr-Pro-Tyr motif. MAP2K4 shows preference for phosphorylation of the Tyr residue and MAP2K7/MKK7 for the Thr residue. The phosphorylation of the Thr residue by MAP2K7/MKK7 seems to be the prerequisite for JNK activation at least in response to proinflammatory cytokines, while other stimuli activate both MAP2K4/MKK4 and MAP2K7/MKK7 which synergistically phosphorylate JNKs. MAP2K4 is required for maintaining peripheral lymphoid homeostasis. The MKK/JNK signaling pathway is also involved in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis. Whereas MAP2K7/MKK7 exclusively activates JNKs, MAP2K4/MKK4 additionally activates the p38 MAPKs MAPK11, MAPK12, MAPK13 and MAPK14.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.68::26-182 PF00069::Pkinase 99.95::26-184 GO:0005829::cytosol confident hh_3aln_A_1::5-183 very confident psy9858 307 P51952::Cyclin-dependent kinase 7 (Fragment) ::Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::57-301 PF00069::Pkinase 100.00::57-299 GO:0005829::cytosol confident hh_1ua2_A_1::51-303 very confident psy12305 516 Q00537::Cyclin-dependent kinase 17 ::May play a role in terminally differentiated neurons. Has a Ser/Thr-phosphorylating activity for histone H1.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::226-462 PF00069::Pkinase 100.00::93-460 GO:0005829::cytosol confident hh_3mtl_A_1::90-134,226-417,419-421,423-493 very confident psy787 235 Q0GGW5::Serine/threonine-protein kinase STK11 ::Tumor suppressor serine/threonine-protein kinase that controls the activity of AMP-activated protein kinase (AMPK) family members, thereby playing a role in various processes such as cell metabolism, cell polarity, apoptosis and DNA damage response. Acts by phosphorylating the T-loop of AMPK family proteins, leading to promote their activity.::Gallus gallus (taxid: 9031) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.85::39-234 PF00069::Pkinase 100.00::39-235 GO:0005829::cytosol confident hh_2wtk_C_1::34-235 very confident psy10212 444 Q10452::Protein kinase gsk3 ::Interacts with cdc14 which is thought to play a role in the initiation and completion of mitosis. Involved in the positive regulation of mis12.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.88::24-432 PF00069::Pkinase 100.00::24-429 GO:0005829::cytosol very confident hh_4e7w_A_1::20-48,50-92,213-424,426-436 very confident psy16292 245 Q28021::Rho-associated protein kinase 2 ::Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. Involved in regulation of smooth muscle contraction, actin cytoskeleton organization, stress fiber and focal adhesion formation, neurite retraction, cell adhesion and motility via phosphorylation of ADD1, BRCA2, CNN1, EZR, DPYSL2, EP300, MSN, MYL9/MLC2, NPM1, RDX, PPP1R12A and VIM. Phosphorylates SORL1 and IRF4. Acts as a negative regulator of VEGF-induced angiogenic endothelial cell activation. Positively regulates the activation of p42/MAPK1-p44/MAPK3 and of p90RSK/RPS6KA1 during myogenic differentiation. Plays an important role in the timely initiation of centrosome duplication. Inhibits keratinocyte terminal differentiation. May regulate closure of the eyelids and ventral body wall through organization of actomyosin bundles. Plays a critical role in the regulation of spine and synaptic properties in the hippocampus.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.79::12-205 PF00069::Pkinase 99.96::11-203 GO:0005829::cytosol confident rp_3v8s_A_1::1-162 very confident psy13735 792 Q54IH8::Probable serine/threonine-protein kinase ndrB ::::Dictyostelium discoideum (taxid: 44689) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::17-281 PF00069::Pkinase 100.00::17-277 GO:0005829::cytosol confident hh_2w4o_A_1::14-100,103-164,167-185,193-236,239-280 very confident psy7471 127 Q54L81::Probable serine/threonine-protein kinase DDB_G0286841 ::::Dictyostelium discoideum (taxid: 44689) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.21::73-112 PF00069::Pkinase 99.52::73-112 GO:0005829::cytosol confident hh_2i0e_A_1::23-100,102-121 very confident psy7162 309 Q5TCY1::Tau-tubulin kinase 1 ::Serine/threonine kinase which is able to phosphorylate TAU on serine, threonine and tyrosine residues. Induces aggregation of TAU.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::17-289 PF00069::Pkinase 100.00::17-291 GO:0005829::cytosol confident hh_2bdw_A_1::8-68,70-104,107-146,148-171,189-240,243-294 very confident psy18060 549 Q69ZM6::Serine/threonine-protein kinase 36 ::Serine/threonine protein kinase which plays an important role in the sonic hedgehog (Shh) pathway by regulating the activity of GLI transcription factors. Controls the activity of the transcriptional regulators GLI1, GLI2 and GLI3 by opposing the effect of SUFU and promoting their nuclear localization. GLI2 requires an additional function of STK36 to become transcriptionally active, but the enzyme does not need to possess an active kinase catalytic site for this to occur. Required for postnatal development, possibly by regulating the homeostasis of cerebral spinal fluid or ciliary function. Essential for construction of the central pair apparatus of motile cilia.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::121-373 PF00069::Pkinase 100.00::121-371 GO:0005829::cytosol confident hh_2w4o_A_1::116-156,161-270,272-374 very confident psy10833 419 Q6CVA2::Serine/threonine-protein kinase STE20 ::MAP4K component of the MAPK pathway required for the mating pheromone response and the regulation of cell polarity and cell cycle. Phosphorylates histone H2B to form H2BS10ph.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.67::274-410 PF00069::Pkinase 99.91::274-418 GO:0005829::cytosol confident hh_2c30_A_1::252-409,414-419 very confident psy3253 251 Q7ZUQ3::Serine/threonine-protein kinase 3 ::Stress-activated, pro-apoptotic kinase which, following caspase-cleavage, enters the nucleus and induces chromatin condensation followed by internucleosomal DNA fragmentation. Key component of the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein stk3/mst2 and stk4/mst1, in complex with its regulatory protein sav1, phosphorylates and activates lats1/2 in complex with its regulatory protein mob1, which in turn phosphorylates and inactivates yap1 oncoprotein and wwtr1/taz. Phosphorylation of yap1 by lats2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration.::Danio rerio (taxid: 7955) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.86::2-243 PF00069::Pkinase 100.00::2-238 GO:0005829::cytosol confident hh_3com_A_1::2-75,109-244 very confident psy13105 229 Q8BW96::Calcium/calmodulin-dependent protein kinase type 1D ::Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, activates CREB-dependent gene transcription, regulates calcium-mediated granulocyte function and respiratory burst and promotes basal dendritic growth of hippocampal neurons. In neutrophil cells, required for cytokine-induced proliferative responses and activation of the respiratory burst. Phosphorylates the transcription activator CREB1 on 'Ser-133' in hippocampal neuron nuclei. May play a role in apoptosis of erythroleukemia cells. In vitro, phosphorylates transcription factor CREM isoform Beta (By similarity). Isoform 1 but not isoform 2 activates CREB1.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.80::31-226 PF00069::Pkinase 99.97::31-225 GO:0005829::cytosol confident hh_2w4o_A_1::23-66,70-83,108-226 very confident psy5368 406 Q8SRL5::Probable spindle assembly checkpoint kinase homolog ::Required for high-fidelity chromosome segregation during the later part of each cell cycle. Has a role in attaching the kinetochores to the microtubules and ensuring that sister kinetochores connect to opposite poles. The promotion of bi-orientation is achieved by selectively detaching kinetochore-microtubule attachments that are not under tension.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.92::57-298 PF00069::Pkinase 100.00::56-294 GO:0005829::cytosol confident hh_2w4o_A_1::55-86,89-299 very confident psy4039 588 Q99MQ3::Serine/threonine-protein kinase PINK1, mitochondrial ::Protects against mitochondrial dysfunction during cellular stress, potentially by phosphorylating mitochondrial proteins (By similarity). Involved in the clearance of damaged mitochondria via selective autophagy (mitophagy) (By similarity). It is necessary for PARK2 recruitment to dysfunctional mitochondria to initiate their degradation.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.89::198-504 PF00069::Pkinase 100.00::198-517 GO:0005829::cytosol confident hh_3i6u_A_1::196-237,247-265,270-284,314-334,336-379,382-400,407-428,432-504,514-518 very confident psy14897 99 Q9JMK2::Casein kinase I isoform epsilon ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates DVL1. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating PER1 and PER2. Retains PER1 in the cytoplasm. Inhibits cytokine-induced granuloytic differentiation.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.04::9-98 PF00069::Pkinase 99.57::6-98 GO:0005829::cytosol confident hh_3i6u_A_1::6-98 very confident psy17270 429 Q9NR20::Dual specificity tyrosine-phosphorylation-regulated kinase 4 ::Possible non-essential role in spermiogenesis.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::23-368 PF00069::Pkinase 100.00::23-364 GO:0005829::cytosol confident hh_3kvw_A_1::14-57,104-370 very confident psy4001 925 Q9VA38::Serine/threonine-protein kinase Warts ::Negative regulator of Yorkie (Yki) in the Hippo/SWH (Sav/Wts/Hpo) signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. The Hippo/SWH signaling pathway inhibits the activity of the transcriptional complex formed by Scalloped (sd) and Yki and the target genes of this pathway include cyclin-E (cycE), diap1 and bantam. Inhibits nuclear localization of Yki. Regulates salivary gland degradation in a PI3K-dependent manner and Yki- and Sd-independent, mechanism.::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.89::453-836 PF00069::Pkinase 100.00::453-833 GO:0005829::cytosol confident hh_2w4o_A_1::451-488,498-498,525-525,569-675,729-814,816-839 very confident psy8309 494 no hit no match COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::67-348 PF00069::Pkinase 100.00::67-347 GO:0005829::cytosol confident hh_2i0e_A_1::61-149,171-334,336-369,398-399,401-442 very confident psy11107 321 P78362::SRSF protein kinase 2 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28. Can mediate hepatitis B virus (HBV) core protein phosphorylation. Plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.88::18-237 PF00069::Pkinase 100.00::18-321 GO:0005856::cytoskeleton confident hh_2w4o_A_1::11-53,55-72,79-88,93-139,141-160,173-256,293-321 very confident psy8006 126 Q91XS8::Serine/threonine-protein kinase 17B ::Acts as a positive regulator of apoptosis.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.27::7-125 PF00069::Pkinase 99.86::7-126 GO:0005856::cytoskeleton confident hh_2y0a_A_1::5-63,65-126 very confident psy6191 305 Q07832::Serine/threonine-protein kinase PLK1 ::Serine/threonine-protein kinase that performs several important functions throughout M phase of the cell cycle, including the regulation of centrosome maturation and spindle assembly, the removal of cohesins from chromosome arms, the inactivation of anaphase-promoting complex/cyclosome (APC/C) inhibitors, and the regulation of mitotic exit and cytokinesis. Polo-like kinase proteins acts by binding and phosphorylating proteins are that already phosphorylated on a specific motif recognized by the POLO box domains. Phosphorylates BORA, BUB1B/BUBR1, CCNB1, CDC25C, CEP55, ECT2, ERCC6L, FBXO5/EMI1, FOXM1, KIF20A/MKLP2, MLF1IP, NEDD1, NINL, NPM1, NUDC, PKMYT1/MYT1, PLK1S1/KIZ, PPP1R12A/MYPT1, PRC1, RACGAP1/CYK4, SGOL1, STAG2/SA2, TEX14, TOPORS, p73/TP73, TPT1 and WEE1. Plays a key role in centrosome functions and the assembly of bipolar spindles by phosphorylating PLK1S1/KIZ, NEDD1 and NINL. NEDD1 phosphorylation promotes subsequent targeting of the gamma-tubulin ring complex (gTuRC) to the centrosome, an important step for spindle formation. Phosphorylation of NINL component of the centrosome leads to NINL dissociation from other centrosomal proteins. Involved in mitosis exit and cytokinesis by phosphorylating CEP55, ECT2, KIF20A/MKLP2, MLF1IP, PRC1 and RACGAP1. Recruited at the central spindle by phosphorylating and docking PRC1 and KIF20A/MKLP2; creates its own docking sites on PRC1 and KIF20A/MKLP2 by mediating phosphorylation of sites subsequently recognized by the POLO box domains. Phosphorylates RACGAP1, thereby creating a docking site for the Rho GTP exchange factor ECT2 that is essential for the cleavage furrow formation. Promotes the central spindle recruitment of ECT2. Plays a central role in G2/M transition of mitotic cell cycle by phosphorylating CCNB1, CDC25C, FOXM1, MLF1IP, PKMYT1/MYT1, PPP1R12A/MYPT1 and WEE1. Part of a regulatory circuit that promotes the activation of CDK1 by phosphorylating the positive regulator CDC25C and inhibiting the negative regulators WEE1 and PKMYT1/MYT1. Also acts by mediating phosphorylation of cyclin-B1 (CCNB1) on centrosomes in prophase. Phosphorylates FOXM1, a key mitotic transcription regulator, leading to enhance FOXM1 transcriptional activity. Involved in kinetochore functions and sister chromatide cohesion by phosphorylating BUB1B/BUBR1, FBXO5/EMI1 and STAG2/SA2. PLK1 is high on non-attached kinetochores suggesting a role of PLK1 in kinetochore attachment or in spindle assembly checkpoint (SAC) regulation. Required for kinetochore localization of BUB1B. Regulates the dissociation of cohesin from chromosomes by phosphorylating cohesin subunits such as STAG2/SA2. Phosphorylates SGOL1: required for spindle pole localization of isoform 3 of SGOL1 and plays a role in regulating its centriole cohesion function. Mediates phosphorylation of FBXO5/EMI1, a negative regulator of the APC/C complex during prophase, leading to FBXO5/EMI1 ubiquitination and degradation by the proteasome. Acts as a negative regulator of p53 family members: phosphorylates TOPORS, leading to inhibit the sumoylation of p53/TP53 and simultaneously enhance the ubiquitination and subsequent degradation of p53/TP53. Phosphorylates the transactivation domain of the transcription factor p73/TP73, leading to inhibit p73/TP73-mediated transcriptional activation and pro-apoptotic functions. Phosphorylates BORA, and thereby promotes the degradation of BORA. Contributes to the regulation of AURKA function. Also required for recovery after DNA damage checkpoint and entry into mitosis.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.61::2-201 PF00069::Pkinase 99.96::3-199 GO:0005876::spindle microtubule confident rp_2rku_A_1::102-218,220-224 very confident psy4988 627 O55047::Serine/threonine-protein kinase tousled-like 2 ::Testis-specific isoforms may play a role in spermatogenesis. Highly expressed in embryos throughout development.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::289-570 PF00069::Pkinase 100.00::289-568 GO:0005882::intermediate filament confident hh_2w4o_A_1::282-325,335-361,363-412,415-451,460-477,482-521,523-572 very confident psy11874 767 P32866::G protein-coupled receptor kinase 2 ::Specifically phosphorylates the activated forms of G protein-coupled receptors (By similarity). Required during oogenesis and embryogenesis; component of a signaling pathway that functions during egg chamber maturation.::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::116-383 PF00069::Pkinase 100.00::116-381 GO:0005886::plasma membrane confident hh_2acx_A_1::43-69,71-209,211-367,370-401,562-644 very confident psy2648 708 Q8VHF0::MAP/microtubule affinity-regulating kinase 3 ::Involved in the specific phosphorylation of microtubule-associated proteins for tau, MAP2 and MAP4. Phosphorylates CDC25C. Regulates localization and activity of some histone deacetylases by mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the nucleus.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.96::48-294 PF00069::Pkinase 100.00::48-294 GO:0005938::cell cortex confident hh_3fe3_A_1::36-301,312-323,354-396 very confident psy3574 302 Q8IVH8::Mitogen-activated protein kinase kinase kinase kinase 3 ::May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.75::10-193 PF00069::Pkinase 99.97::2-193 GO:0006915::apoptotic process very confident hh_2w4o_A_1::1-23,25-31,35-88,90-108,112-158,160-193 very confident psy758 292 Q27032::Cell division control protein 2 homolog ::Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.::Theileria parva (taxid: 5875) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.85::4-266 PF00069::Pkinase 100.00::4-263 GO:0007095::mitotic G2 DNA damage checkpoint confident rp_4agu_A_1::1-152 very confident psy700 93 Q3UVC0::Kinase suppressor of Ras 2 ::Location-regulated scaffold connecting MEK to RAF. Blocks MAP3K8 kinase activity and MAP3K8-mediated signaling. Acts as a negative regulator of MAP3K3-mediated activation of ERK, JNK and NF-kappa-B pathways, inhibiting MAP3K3-mediated interleukin-8 production.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.99::2-62 PF00069::Pkinase 98.56::1-38 GO:0007426::tracheal outgrowth, open tracheal system confident no hit no match psy14434 404 Q4WSF6::Mitogen-activated protein kinase hog1 ::Mitogen-activated protein kinase involved in a signal transduction pathway that is activated by changes in the osmolarity of the extracellular environment. Controls osmotic regulation of transcription of target genes.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::25-292 PF00069::Pkinase 100.00::25-288 GO:0009790::embryo development confident hh_3oz6_A_1::17-296,300-333 very confident psy14431 1219 Q9Z2A6::Mitogen-activated protein kinase 15 ::Constitutively active kinase which may function as a negative regulator of cell growth. In vitro, phosphorylates FOS.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.92::562-849 PF00069::Pkinase 100.00::562-847 GO:0009790::embryo development confident hh_2w4o_A_1::559-597,602-617,619-630,633-714,716-733,735-784,815-849 very confident psy10603 407 O08648::Mitogen-activated protein kinase kinase kinase 4 ::Component of a protein kinase signal transduction cascade. Activates the CSBP2, P38 and JNK MAPK pathways, but not the ERK pathway. Specifically phosphorylates and activates MAP2K4 and MAP2K6.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.96::6-267 PF00069::Pkinase 100.00::6-266 GO:0010468::regulation of gene expression confident hh_2w4o_A_1::5-39,45-95,97-158,163-181,185-268 very confident psy11098 380 O60229::Kalirin ::Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::102-355 PF00069::Pkinase 100.00::102-351 GO:0010468::regulation of gene expression confident hh_2w4o_A_1::96-137,139-168,172-266,268-376 very confident psy8005 91 Q0KHT7::Probable serine/threonine-protein kinase CG32666 ::::Drosophila melanogaster (taxid: 7227) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.61::4-89 PF00069::Pkinase 99.65::4-90 GO:0010468::regulation of gene expression confident hh_2y0a_A_1::2-59,61-90 very confident psy9321 67 Q9HGN1::Serine/threonine-protein kinase gcn2 ::Phosphorylates eIF-2.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.38::6-67 PF00069::Pkinase 99.13::5-67 GO:0010468::regulation of gene expression confident hh_4g31_A_1::8-34,37-67 very confident psy364 148 Q9JIH7::Serine/threonine-protein kinase WNK1 ::Serine/threonine kinase which plays an important role in the regulation of electrolyte homeostasis, cell signaling, survival and proliferation. Acts as an activator and inhibitor of sodium-coupled chloride cotransporters and potassium-coupled chloride cotransporters respectively. Activates SCNN1A, SCNN1B, SCNN1D and SGK1. Controls sodium and chloride ion transport by inhibiting the activity of WNK4, by either phosphorylating the kinase or via an interaction between WNK4 and the autoinhibitory domain of WNK1. WNK4 regulates the activity of the thiazide-sensitive Na-Cl cotransporter, SLC12A3, by phosphorylation. WNK1 may also play a role in actin cytoskeletal reorganization. Phosphorylates NEDD4L.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.28::67-148 PF00069::Pkinase 99.47::67-148 GO:0010765::positive regulation of sodium ion transport confident hh_1t4h_A_1::58-148 very confident psy1096 239 Q28824::Myosin light chain kinase, smooth muscle ::Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activty. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. Implicated in the regulation of endothelial as well as vascular permeability, probably via the regulation of cytoskeletal rearrangements. In the nervous system it has been shown to control the growth initiation of astrocytic processes in culture and to participate in transmitter release at synapses formed between cultured sympathetic ganglion cells. Critical participant in signaling sequences that result in fibroblast apoptosis. Plays a role in the regulation of epithelial cell survival. Required for epithelial wound healing, especially during actomyosin ring contraction during purse-string wound closure. Mediates RhoA-dependent membrane blebbing. Triggers TRPC5 channel activity in a calcium-dependent signaling, by inducing its subcellular localization at the plasma membrane. Promotes cell migration (including tumor cells) and tumor metastasis. PTK2B/PYK2 activation by phosphorylation mediates ITGB2 activation and is thus essential to trigger neutrophil transmigration during acute lung injury (ALI). May regulate optic nerve head astrocyte migration. Probably involved in mitotic cytoskeletal regulation. Regulates tight junction probably by modulating ZO-1 exchange in the perijunctional actomyosin ring. Mediates burn-induced microvascular barrier injury; triggers endothelial contraction in the development of microvascular hyperpermeability by phosphorylating MLC. Essential for intestinal barrier dysfunction. Mediates Giardia spp.-mediated reduced epithelial barrier function during giardiasis intestinal infection via reorganization of cytoskeletal F-actin and tight junctional ZO-1. Necessary for hypotonicity-induced Ca(2+) entry and subsequent activation of volume-sensitive organic osmolyte/anion channels (VSOAC) in cervical cancer cells.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.80::21-209 PF00069::Pkinase 100.00::20-207 GO:0014706::striated muscle tissue development confident hh_2y0a_A_1::20-38,42-81,84-237 very confident psy14626 249 Q62915::Peripheral plasma membrane protein CASK ::Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoring and ion channel trafficking. Contributes to neural development and regulation of gene expression via interaction with the transcription factor TRB1. Binds to cell-surface proteins, including amyloid precursor protein, neurexins, and syndecans. May mediate a link between the extracellular matrix and the actin cytoskeleton via its interaction with syndecan and with the actin/spectrin-binding protein 4.1.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.84::10-240 PF00069::Pkinase 100.00::10-228 GO:0016363::nuclear matrix confident hh_3c0i_A_1::7-167,181-244 very confident psy1646 178 P10830::Protein kinase C epsilon type ::Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays essential roles in the regulation of multiple cellular processes linked to cytoskeletal proteins, such as cell adhesion, motility, migration and cell cycle, functions in neuron growth and ion channel regulation, and is involved in immune response, cancer cell invasion and regulation of apoptosis. Mediates cell adhesion to the extracellular matrix via integrin-dependent signaling, by mediating angiotensin-2-induced activation of integrin beta-1 (ITGB1) in cardiac fibroblasts. Phosphorylates MARCKS, which phosphorylates and activates PTK2/FAK, leading to the spread of cardiomyocytes. Involved in the control of the directional transport of ITGB1 in mesenchymal cells by phosphorylating vimentin (VIM), an intermediate filament (IF) protein. In epithelial cells, associates with and phosphorylates keratin-8 (KRT8), which induces targeting of desmoplakin at desmosomes and regulates cell-cell contact. Phosphorylates IQGAP1, which binds to CDC42, mediating epithelial cell-cell detachment prior to migration. During cytokinesis, forms a complex with YWHAB, which is crucial for daughter cell separation, and facilitates abscission by a mechanism which may implicate the regulation of RHOA. In cardiac myocytes, regulates myofilament function and excitation coupling at the Z-lines, where it is indirectly associated with F-actin via interaction with COPB1. During endothelin-induced cardiomyocyte hypertrophy, mediates activation of PTK2/FAK, which is critical for cardiomyocyte survival and regulation of sarcomere length. Plays a role in the pathogenesis of dilated cardiomyopathy via persistent phosphorylation of troponin I (TNNI3). Involved in nerve growth factor (NFG)-induced neurite outgrowth and neuron morphological change independently of its kinase activity, by inhibition of RHOA pathway, activation of CDC42 and cytoskeletal rearrangement. May be involved in presynaptic facilitation by mediating phorbol ester-induced synaptic potentiation. Phosphorylates gamma-aminobutyric acid receptor subunit gamma-2 (GABRG2), which reduces the response of GABA receptors to ethanol and benzodiazepines and may mediate acute tolerance to the intoxicating effects of ethanol. Upon PMA treatment, phosphorylates the capsaicin- and heat-activated cation channel TRPV1, which is required for bradykinin-induced sensitization of the heat response in nociceptive neurons. Is able to form a complex with PDLIM5 and N-type calcium channel, and may enhance channel activities and potentiates fast synaptic transmission by phosphorylating the pore-forming alpha subunit CACNA1B (CaV2.2). Downstream of TLR4, plays an important role in the lipopolysaccharide (LPS)-induced immune response by phosphorylating and activating TICAM2/TRAM, which in turn activates the transcription factor IRF3 and subsequent cytokines production. In differentiating erythroid progenitors, is regulated by EPO and controls the protection against the TNFSF10/TRAIL-mediated apoptosis, via BCL2. May be involved in the regulation of the insulin-induced phosphorylation and activation of AKT1.::Oryctolagus cuniculus (taxid: 9986) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.29::101-175 PF00069::Pkinase 99.09::101-178 GO:0016477::cell migration confident rp_2i0e_A_1::80-123,125-175 very confident psy11571 372 Q3UU96::Serine/threonine-protein kinase MRCK alpha ::Serine/threonine-protein kinase which is an important downstream effector of CDC42 and plays a role in the regulation of cytoskeleton reorganization and cell migration. Regulates actin cytoskeletal reorganization via phosphorylation of PPP1R12C and MYL9/MLC2. In concert with MYO18A and LRP35A, is involved in modulating lamellar actomyosin retrograde flow that is crucial to cell protrusion and migration. Phosphorylates: PPP1R12A, LIMK1 and LIMK2. May play a role in TFRC-mediated iron uptake.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::17-284 PF00069::Pkinase 100.00::7-284 GO:0016477::cell migration confident hh_4aw2_A_1::3-13,18-48,56-137,148-255,257-279,283-287,302-349,351-370 very confident psy2172 291 Q6P3N6::Cyclin-dependent kinase 8 ::Component of the Mediator complex, a coactivator involved in regulated gene transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Phosphorylates the CTD (C-terminal domain) of the large subunit of RNA polymerase II (RNAp II), which may inhibit the formation of a transcription initiation complex.::Xenopus tropicalis (taxid: 8364) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.88::24-239 PF00069::Pkinase 100.00::24-279 GO:0016592::mediator complex very confident hh_3rgf_A_1::1-279 very confident psy11820 98 Q86Z02::Homeodomain-interacting protein kinase 1 ::Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.::Homo sapiens (taxid: 9606) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.26::2-97 PF00069::Pkinase 99.67::2-96 GO:0016605::PML body very confident hh_2eu9_A_1::2-78,80-97 very confident psy11822 229 Q86Z02::Homeodomain-interacting protein kinase 1 ::Serine/threonine-protein kinase involved in transcription regulation and TNF-mediated cellular apoptosis. Plays a role as a corepressor for homeodomain transcription factors. Phosphorylates DAXX and MYB. Phosphorylates DAXX in response to stress, and mediates its translocation from the nucleus to the cytoplasm. Inactivates MYB transcription factor activity by phosphorylation. Prevents MAP3K5-JNK activation in the absence of TNF. TNF triggers its translocation to the cytoplasm in response to stress stimuli, thus activating nuclear MAP3K5-JNK by derepression and promoting apoptosis. May be involved in anti-oxidative stress responses. Involved in the regulation of eye size, lens formation and retinal lamination during late embryogenesis. Promotes angiogenesis and to be involved in erythroid differentiation. May be involved in malignant squamous cell tumor formation.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.75::52-228 PF00069::Pkinase 99.94::53-227 GO:0016605::PML body confident hh_1o6l_A_1::53-81,85-109,112-117,120-142,146-185,190-228 very confident psy16893 112 E1BMN8::Serine/threonine-protein kinase NLK ::Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.14::17-107 PF00069::Pkinase 99.45::17-106 GO:0018107::peptidyl-threonine phosphorylation very confident hh_1cm8_A_1::15-28,30-96,98-107 very confident psy16889 203 E1BMN8::Serine/threonine-protein kinase NLK ::Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.85::9-193 PF00069::Pkinase 100.00::2-192 GO:0018107::peptidyl-threonine phosphorylation very confident hh_3n9x_A_1::2-184 very confident psy2865 395 E1BMN8::Serine/threonine-protein kinase NLK ::Serine/threonine-protein kinase that regulates a number of transcription factors with key roles in cell fate determination. Positive effector of the non-canonical Wnt signaling pathway, acting downstream of WNT5A, MAP3K7/TAK1 and HIPK2. Activation of this pathway causes binding to and phosphorylation of the histone methyltransferase SETDB1. The NLK-SETDB1 complex subsequently interacts with PPARG, leading to methylation of PPARG target promoters at histone H3K9 and transcriptional silencing. The resulting loss of PPARG target gene transcription inhibits adipogenesis and promotes osteoblastogenesis in mesenchymal stem cells (MSCs). Negative regulator of the canonical Wnt/beta-catenin signaling pathway. Binds to and phosphorylates TCF7L2/TCF4 and LEF1, promoting the dissociation of the TCF7L2/LEF1/beta-catenin complex from DNA, as well as the ubiquitination and subsequent proteolysis of LEF1. Together these effects inhibit the transcriptional activation of canonical Wnt/beta-catenin target genes. Negative regulator of the Notch signaling pathway. Binds to and phosphorylates NOTCH1, thereby preventing the formation of a transcriptionally active ternary complex of NOTCH1, RBPJ/RBPSUH and MAML1. Negative regulator of the MYB family of transcription factors. Phosphorylation of MYB leads to its subsequent proteolysis while phosphorylation of MYBL1 and MYBL2 inhibits their interaction with the coactivator CREBBP. Other transcription factors may also be inhibited by direct phosphorylation of CREBBP itself. Acts downstream of IL6 and MAP3K7/TAK1 to phosphorylate STAT3, which is in turn required for activation of NLK by MAP3K7/TAK1.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.69::80-274 PF00069::Pkinase 99.96::77-272 GO:0018107::peptidyl-threonine phosphorylation confident no hit no match psy1103 59 P80202::Activin receptor type-1B ::Transmembrane serine/threonine kinase activin type-1 receptor forming an activin receptor complex with activin receptor type-2 (ACVR2A or ACVR2B). Transduces the activin signal from the cell surface to the cytoplasm and is thus regulating a many physiological and pathological processes including neuronal differentiation and neuronal survival, hair follicle development and cycling, FSH production by the pituitary gland, wound healing, extracellular matrix production, immunosuppression and carcinogenesis. Activin is also thought to have a paracrine or autocrine role in follicular development in the ovary. Within the receptor complex, type-2 receptors (ACVR2A and/or ACVR2B) act as a primary activin receptors whereas the type-1 receptors like ACVR1B act as downstream transducers of activin signals. Activin binds to type-2 receptor at the plasma membrane and activates its serine-threonine kinase. The activated receptor type-2 then phosphorylates and activates the type-1 receptor such as ACVR1B. Once activated, the type-1 receptor binds and phosphorylates the SMAD proteins SMAD2 and SMAD3, on serine residues of the C-terminal tail. Soon after their association with the activin receptor and subsequent phosphorylation, SMAD2 and SMAD3 are released into the cytoplasm where they interact with the common partner SMAD4. This SMAD complex translocates into the nucleus where it mediates activin-induced transcription. Inhibitory SMAD7, which is recruited to ACVR1B through FKBP1A, can prevent the association of SMAD2 and SMAD3 with the activin receptor complex, thereby blocking the activin signal. Activin signal transduction is also antagonized by the binding to the receptor of inhibin-B via the IGSF1 inhibin coreceptor. ACVR1B also phosphorylates TDP2.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 96.01::1-57 PF00069::Pkinase 98.13::1-59 GO:0018107::peptidyl-threonine phosphorylation confident rp_3gxj_A_1::11-57 very confident psy15409 149 P24014::Protein slit ::A short-range repellent, controlling axon crossing of the midline and a long-range chemorepellent, controlling mesoderm migration and patterning away from the midline. May interact with extracellular matrix molecules. Repulsive ligand for the guidance receptor roundabout (robo) and prevents inappropriate midline crossing by Robo-expressing axons.::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 96.54::6-59 PF00069::Pkinase 98.72::5-118 GO:0021834::chemorepulsion involved in embryonic olfactory bulb interneuron precursor migration confident hh_1u5q_A_1::6-24,27-49,52-64,70-105,110-119 very confident psy3118 227 Q7T2E3::Casein kinase I isoform delta-A ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.::Danio rerio (taxid: 7955) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.61::9-148 PF00069::Pkinase 99.92::9-148 GO:0030529::ribonucleoprotein complex very confident bp_4hni_A_1::1-112 very confident psy622 473 Q6DBX4::Serine/threonine-protein kinase greatwall ::Serine/threonine kinase that plays a key role in M phase by acting as a regulator of mitosis entry and maintenance. Acts by promoting the inactivation of protein phosphatase 2A (PP2A) during M phase: does not directly inhibit PP2A but acts by mediating phosphorylation and subsequent activation of arpp19 and ensa at 'Ser-62' and 'Ser-74', respectively. ARPP19 and ENSA are phosphatase inhibitors that specifically inhibit the ppp2r2d (PR55-delta) subunit of PP2A. Inactivation of PP2A during M phase is essential to keep cyclin-B1-CDK1 activity high. Following DNA damage, it is also involved in checkpoint recovery by being inhibited (By similarity). May be involved in megakaryocyte differentiation.::Danio rerio (taxid: 7955) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.86::43-306 PF00069::Pkinase 100.00::43-303 GO:0031323::regulation of cellular metabolic process confident hh_2w4o_A_1::40-64,66-79,85-178,180-197,202-213,217-248,252-309 very confident psy8260 427 P70618::Mitogen-activated protein kinase 14 ::Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. MAPK14 is one of the four p38 MAPKs which play an important role in the cascades of cellular responses evoked by extracellular stimuli such as proinflammatory cytokines or physical stress leading to direct activation of transcription factors. Accordingly, p38 MAPKs phosphorylate a broad range of proteins and it has been estimated that they may have approximately 200 to 300 substrates each. Some of the targets are downstream kinases which are activated through phosphorylation and further phosphorylate additionnal targets. RPS6KA5/MSK1 and RPS6KA4/MSK2 can directly phosphorylate and activate transcription factors such as CREB1, ATF1, the NF-kappa-B isoform RELA/NFKB3, STAT1 and STAT3, but can also phosphorylate histone H3 and the nucleosomal protein HMGN1. RPS6KA5/MSK1 and RPS6KA4/MSK2 play important roles in the rapid induction of immediate-early genes in response to stress or mitogenic stimuli, either by inducing chromatin remodeling or by recruiting the transcription machinery. On the other hand, two other kinase targets, MAPKAPK2/MK2 and MAPKAPK3/MK3, participate in the control of gene expression mostly at the post-transcriptional level, by phosphorylating ZFP36 (tristetraprolin) and ELAVL1, and by regulating EEF2K, which is important for the elongation of mRNA during translation. MKNK1/MNK1 and MKNK2/MNK2, two other kinases activated by p38 MAPKs, regulate protein synthesis by phosphorylating the initiation factor EIF4E2. MAPK14 interacts also with casein kinase II, leading to its activation through autophosphorylation and further phosphorylation of TP53/p53. In the cytoplasm, the p38 MAPK pathway is an important regulator of protein turnover. For example, CFLAR is an inhibitor of TNF-induced apoptosis whose proteasome-mediated degradation is regulated by p38 MAPK phosphorylation. In a similar way, MAPK14 phosphorylates the ubiquitin ligase SIAH2, regulating its activity towards EGLN3. MAPK14 may also inhibit the lysosomal degradation pathway of autophagy by interfering with the intracellular trafficking of the transmembrane protein ATG9. Another function of MAPK14 is to regulate the endocytosis of membrane receptors by different mechanisms that impinge on the small GTPase RAB5A. In addition, clathrin-mediated EGFR internalization induced by inflammatory cytokines and UV irradiation depends on MAPK14-mediated phosphorylation of EGFR itself as well as of RAB5A effectors. Ectodomain shedding of transmembrane proteins is regulated by p38 MAPKs as well. In response to inflammatory stimuli, p38 MAPKs phosphorylate the membrane-associated metalloprotease ADAM17. Such phosphorylation is required for ADAM17-mediated ectodomain shedding of TGF-alpha family ligands, which results in the activation of EGFR signaling and cell proliferation. Another p38 MAPK substrate is FGFR1. FGFR1 can be translocated from the extracellular space into the cytosol and nucleus of target cells, and regulates processes such as rRNA synthesis and cell growth. FGFR1 translocation requires p38 MAPK activation. In the nucleus, many transcription factors are phosphorylated and activated by p38 MAPKs in response to different stimuli. Classical examples include ATF1, ATF2, ATF6, ELK1, PTPRH, DDIT3, TP53/p53 and MEF2C and MEF2A. The p38 MAPKs are emerging as important modulators of gene expression by regulating chromatin modifiers and remodelers. The promoters of several genes involved in the inflammatory response, such as IL6, IL8 and IL12B, display a p38 MAPK-dependent enrichment of histone H3 phosphorylation on 'Ser-10' (H3S10ph) in LPS-stimulated myeloid cells. This phosphorylation enhances the accessibility of the cryptic NF-kappa-B-binding sites marking promoters for increased NF-kappa-B recruitment. Phosphorylates CDC25B and CDC25C which is required for binding to 14-3-3 proteins and leads to initiation of a G2 delay after ultraviolet radiation. Phosphorylates TIAR following DNA damage, releasing TIAR from GADD45A mRNA and preventing mRNA degradation. The p38 MAPKs may also have kinase-independent roles, which are thought to be due to the binding to targets in the absence of phosphorylation. Protein O-Glc-N-acylation catalyzed by the OGT is regulated by MAPK14, and, although OGT does not seem to be phosphorylated by MAPK14, their interaction increases upon MAPK14 activation induced by glucose deprivation. This interaction may regulate OGT activity by recruiting it to specific targets such as neurofilament H, stimulating its O-Glc-N-acylation. Required in mid-fetal development for the growth of embryo-derived blood vessels in the labyrinth layer of the placenta. Also plays an essential role in developmental and stress-induced erythropoiesis, through regulation of EPO gene expression.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.88::66-392 PF00069::Pkinase 100.00::66-388 GO:0031663::lipopolysaccharide-mediated signaling pathway confident hh_2fst_X_1::64-82,84-247,254-264,282-286,302-425 very confident psy1097 179 Q28824::Myosin light chain kinase, smooth muscle ::Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activty. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. Implicated in the regulation of endothelial as well as vascular permeability, probably via the regulation of cytoskeletal rearrangements. In the nervous system it has been shown to control the growth initiation of astrocytic processes in culture and to participate in transmitter release at synapses formed between cultured sympathetic ganglion cells. Critical participant in signaling sequences that result in fibroblast apoptosis. Plays a role in the regulation of epithelial cell survival. Required for epithelial wound healing, especially during actomyosin ring contraction during purse-string wound closure. Mediates RhoA-dependent membrane blebbing. Triggers TRPC5 channel activity in a calcium-dependent signaling, by inducing its subcellular localization at the plasma membrane. Promotes cell migration (including tumor cells) and tumor metastasis. PTK2B/PYK2 activation by phosphorylation mediates ITGB2 activation and is thus essential to trigger neutrophil transmigration during acute lung injury (ALI). May regulate optic nerve head astrocyte migration. Probably involved in mitotic cytoskeletal regulation. Regulates tight junction probably by modulating ZO-1 exchange in the perijunctional actomyosin ring. Mediates burn-induced microvascular barrier injury; triggers endothelial contraction in the development of microvascular hyperpermeability by phosphorylating MLC. Essential for intestinal barrier dysfunction. Mediates Giardia spp.-mediated reduced epithelial barrier function during giardiasis intestinal infection via reorganization of cytoskeletal F-actin and tight junctional ZO-1. Necessary for hypotonicity-induced Ca(2+) entry and subsequent activation of volume-sensitive organic osmolyte/anion channels (VSOAC) in cervical cancer cells.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.71::49-178 PF00069::Pkinase 99.93::45-178 GO:0031672::A band confident hh_2y0a_A_1::19-33,40-41,43-74,76-179 very confident psy12427 356 Q86AD7::Probable myosin light chain kinase DDB_G0271550 ::May phosphorylate a specific serine in the N-terminus of a myosin light chain.::Dictyostelium discoideum (taxid: 44689) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::110-356 PF00069::Pkinase 100.00::110-356 GO:0031672::A band confident hh_1kob_A_1::85-206,212-356 very confident psy12418 2324 Q23551::Twitchin ::Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.::Caenorhabditis elegans (taxid: 6239) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.78::1690-1938 PF00069::Pkinase 99.98::1690-1943 GO:0031674::I band confident hh_3uto_A_1::1515-1575,1577-1621,1627-1632,1634-1641,1647-1655,1659-1662,1664-1667,1672-1885,1887-1889,1891-1896,1902-1903,1905-2000,2084-2184 very confident psy5063 681 Q8IR79::LIM domain kinase 1 ::Protein kinase which regulates actin filament dynamics. Phosphorylates and inactivates the actin binding/depolymerizing factor tsr/cofilin, thereby stabilizing the actin cytoskeleton. Modulation of actin cytoskeleton dynamics may be essential for imaginal disk morphogenesis and axon guidance.::Drosophila melanogaster (taxid: 7227) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.70::482-677 PF00069::Pkinase 99.92::482-676 GO:0031981::nuclear lumen confident hh_3s95_A_1::474-527,553-680 very confident psy14700 159 Q5R669::Tribbles homolog 2 ::Interacts with MAPK kinases and regulates activation of MAP kinases. Does not display kinase activity.::Pongo abelii (taxid: 9601) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.29::1-137 PF00069::Pkinase 99.91::1-132 GO:0032436::positive regulation of proteasomal ubiquitin-dependent protein catabolic process confident hh_1o6l_A_1::1-27,29-52,55-155 very confident psy431 179 Q63450::Calcium/calmodulin-dependent protein kinase type 1 ::Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, regulates transcription activators activity, cell cycle, hormone production, cell differentiation, actin filament organization and neurite outgrowth. Recognizes the substrate consensus sequence [MVLIF]-x-R-x(2)-[ST]-x(3)-[MVLIF]. Regulates axonal extension and growth cone motility in hippocampal and cerebellar nerve cells. Upon NMDA receptor-mediated Ca(2+) elevation, promotes dendritic growth in hippocampal neurons and is essential in synapses for full long-term potentiation (LTP) and ERK2-dependent translational activation. Downstream of NMDA receptors, promotes the formation of spines and synapses in hippocampal neurons by phopshorylating ARHGEF7/BETAPIX on 'Ser-516', which results in the enhancement of ARHGEF7 activity and activation of RAC1. Promotes neuronal differentiation and neurite outgrowth by activation and phosphorylation of MARK2 on 'Ser-91', 'Ser-92', 'Ser-93' and 'Ser-294'. Promotes nuclear export of HDAC5 and binding to 14-3-3 by phosphorylation of 'Ser-259' and 'Ser-498' in the regulation of muscle cell differentiation (By similarity). Regulates NUMB-mediated endocytosis by phosphorylation of NUMB on 'Ser-275' and 'Ser-294'. Involved in the regulation of basal and estrogen-stimulated migration of medulloblastoma cells through ARHGEF7/BETAPIX phosphorylation (By similarity). Is required for proper activation of cyclin-D1/CDK4 complex during G1 progression in diploid fibroblasts. Plays a role in K(+) and ANG2-mediated regulation of the aldosterone synthase (CYP11B2) to produce aldosterone in the adrenal cortex. Phosphorylates EIF4G3/eIF4GII. In vitro phosphorylates CREB1, ATF1, CFTR, MYL9, SYN1/synapsin I and SYNII/synapsin II.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.58::8-110 PF00069::Pkinase 99.74::10-108 GO:0032793::positive regulation of CREB transcription factor activity confident rp_2jam_A_1::20-147 very confident psy11194 316 Q9D411::Testis-specific serine/threonine-protein kinase 4 ::May be involved in a signaling pathway during male germ cell development or mature sperm function. Phosphorylates CREB1 on Ser-133 and stimulates downstream signaling.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::24-288 PF00069::Pkinase 100.00::24-283 GO:0032793::positive regulation of CREB transcription factor activity confident hh_2w4o_A_1::19-60,66-173,181-208,210-304 very confident psy6377 383 Q9SPK4::Phosphoenolpyruvate carboxylase kinase 1 ::Calcium-independent kinase involved in light-dependent phosphoenolpyruvate carboxylase phosphorylation.::Arabidopsis thaliana (taxid: 3702) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::2-243 PF00069::Pkinase 100.00::4-239 GO:0032793::positive regulation of CREB transcription factor activity confident hh_2w4o_A_1::4-38,40-67,69-243 very confident psy17155 99 Q9DGE0::Dual specificity mitogen-activated protein kinase kinase 6 ::Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Phosphorylation by MAP2K6 asymmetrically activates p38 on one side of the blastodisc, an event which is necessary for blastomere cleavage.::Danio rerio (taxid: 7955) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.33::2-96 PF00069::Pkinase 99.69::2-95 GO:0034134::toll-like receptor 2 signaling pathway confident rp_3fme_A_1::7-90 very confident psy6542 334 P32865::G protein-coupled receptor kinase 1 ::Specifically phosphorylates the activated forms of G protein-coupled receptors.::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.69::12-226 PF00069::Pkinase 99.94::12-224 GO:0035091::phosphatidylinositol binding confident hh_1xjd_A_1::12-63,72-102,104-106,110-132,149-216,218-239,241-245,247-270 very confident psy15481 708 Q9WUN2::Serine/threonine-protein kinase TBK1 ::Serine/threonine kinase that plays an essential role in regulating inflammatory responses to foreign agents. Following activation of toll-like receptors by viral or bacterial components, associates with TRAF3 and TANK and phosphorylates interferon regulatory factors (IRFs) IRF3 and IRF7 as well as DDX3X. This activity allows subsequent homodimerization and nuclear translocation of the IRFs leading to transcriptional activation of pro-inflammatory and antiviral genes including IFN-alpha and IFN-beta. In order to establish such an antiviral state, TBK1 form several different complexes whose composition depends on the type of cell and cellular stimuli. Thus, several scaffolding molecules including FADD, TRADD, MAVS or SINTBAD can be recruited to the TBK1-containing-complexes. Under particular conditions, functions as a NF-kappa-B effector by phosphorylating IKKA/CHUK or RELA to translocate NF-Kappa-B to the nucleus. Restricts bacterial proliferation by phosphorylating the autophagy receptor OPTN/Optineurin on 'Ser-177', thus enhancing LC3 binding affinity and antibacterial autophagy. Attenuates retroviral budding by phosphorylating the endosomal sorting complex required for transport-I (ESCRT-I) subunit VPS37C. Phosphorylates and activates AKT1.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::12-302 PF00069::Pkinase 100.00::12-317 GO:0035160::maintenance of epithelial integrity, open tracheal system confident hh_4euu_A_1::6-309 very confident psy4396 271 O88445::Aurora kinase C ::Serine/threonine-protein kinase component of the chromosomal passenger complex (CPC), a complex that acts as a key regulator of mitosis. The CPC complex has essential functions at the centromere in ensuring correct chromosome alignment and segregation and is required for chromatin-induced microtubule stabilization and spindle assembly. Plays also a role in meiosis and more particularly in spermatogenesis. Has redundant cellular functions with AURKB and can rescue an AURKB knockdown. Like AURKB, AURKC phosphorylates histone H3 at 'Ser-10' and 'Ser-28'. Phosphorylates TACC1, another protein involved in cell division, at 'Ser-228'.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.82::82-261 PF00069::Pkinase 100.00::82-259 GO:0035175::histone kinase activity (H3-S10 specific) confident hh_3fdn_A_1::76-130,135-268 very confident psy10459 335 Q9D411::Testis-specific serine/threonine-protein kinase 4 ::May be involved in a signaling pathway during male germ cell development or mature sperm function. Phosphorylates CREB1 on Ser-133 and stimulates downstream signaling.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::53-318 PF00069::Pkinase 100.00::53-311 GO:0035175::histone kinase activity (H3-S10 specific) confident hh_2w4o_A_1::48-89,95-205,212-234,236-316 very confident psy3070 94 Q61831::Mitogen-activated protein kinase 10 ::Serine/threonine-protein kinase involved in various processes such as neuronal proliferation, differentiation, migration and programmed cell death. Extracellular stimuli such as proinflammatory cytokines or physical stress stimulate the stress-activated protein kinase/c-Jun N-terminal kinase (SAP/JNK) signaling pathway. In this cascade, two dual specificity kinases MAP2K4/MKK4 and MAP2K7/MKK7 phosphorylate and activate MAPK10/JNK3. In turn, MAPK10/JNK3 phosphorylates a number of transcription factors, primarily components of AP-1 such as JUN and ATF2 and thus regulates AP-1 transcriptional activity. Plays regulatory roles in the signaling pathways during neuronal apoptosis. Phosphorylates the neuronal microtubule regulator STMN2. Acts in the regulation of the beta-amyloid precursor protein/APP signaling during neuronal differentiation by phosphorylating APP. Participates also in neurite growth in spiral ganglion neurons.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 96.08::33-93 PF00069::Pkinase 98.81::33-93 GO:0042826::histone deacetylase binding confident hh_2xrw_A_1::13-94 very confident psy7889 433 Q5ZKN1::Cyclin-dependent kinase 9 ::Member of the cyclin-dependent kinase pair (CDK9/cyclin-T) complex, also called positive transcription elongation factor b (P-TEFb), which facilitates the transition from abortive to production elongation by phosphorylating the CTD (C-terminal domain) of the large subunit of RNA polymerase II (RNAP II), SUPT5H and RDBP. The CDK9/cyclin-K complex has also a kinase activity toward CTD of RNAP II and can substitute for P-TEFb in vitro.::Gallus gallus (taxid: 9031) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.85::7-264 PF00069::Pkinase 100.00::10-262 GO:0043111::replication fork arrest very confident hh_3mi9_A_1::5-294 very confident psy2674 183 Q8BKG3::Inactive tyrosine-protein kinase 7 ::Inactive tyrosine kinase involved in Wnt signaling pathway. Component of both the non-canonical (also known as the Wnt/planar cell polarity signaling) and the canonical Wnt signaling pathway. Functions in cell adhesion, cell migration, cell polarity, proliferation, actin cytoskeleton reorganization and apoptosis. Has a role in embryogenesis, epithelial tissue organization and angiogenesis.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.74::5-175 PF00069::Pkinase 99.95::2-174 GO:0043229::intracellular organelle confident hh_3s95_A_1::2-28,30-87,102-179 very confident psy3184 185 P00516::cGMP-dependent protein kinase 1 ::Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.33::7-158 PF00069::Pkinase 99.65::9-158 GO:0043234::protein complex confident hh_2i0e_A_1::8-37,41-70,74-74,79-96,98-109,111-111,114-182 very confident psy1812 304 Q61241::Testis-specific serine/threonine-protein kinase 1 ::Testis-specific serine/threonine-protein kinase required during spermatid development. Phosphorylates 'Ser-281' of TSKS. Involved in the late stages of spermatogenesis, during the reconstruction of the cytoplasm. During spermatogenesis, required for the transformation of a ring-shaped structure around the base of the flagellum originating from the chromatoid body.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.77::1-272 PF00069::Pkinase 100.00::1-264 GO:0043234::protein complex confident hh_2w4o_A_1::1-55,70-106,111-135,137-176,227-269 very confident psy2812 152 Q86IX1::Serine/threonine-protein kinase dst1 ::::Dictyostelium discoideum (taxid: 44689) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.62::22-151 PF00069::Pkinase 99.69::22-151 GO:0043234::protein complex confident hh_2x7f_A_1::8-62,75-131,134-151 very confident psy9091 176 Q9UKE5::TRAF2 and NCK-interacting protein kinase ::Serine/threonine kinase that acts as an essential activator of the Wnt signaling pathway. Recruited to promoters of Wnt target genes and required to activate their expression. May act by phosphorylating TCF4/TCF7L2. Appears to act upstream of the JUN N-terminal pathway. May play a role in the response to environmental stress. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it may play a role in cytoskeletal rearrangements and regulate cell spreading. Phosphorylates SMAD1 on Thr-322.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.04::42-174 PF00069::Pkinase 99.78::42-174 GO:0043234::protein complex confident hh_2x7f_A_1::27-63,65-160,164-174 very confident psy13106 177 Q8BW96::Calcium/calmodulin-dependent protein kinase type 1D ::Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, activates CREB-dependent gene transcription, regulates calcium-mediated granulocyte function and respiratory burst and promotes basal dendritic growth of hippocampal neurons. In neutrophil cells, required for cytokine-induced proliferative responses and activation of the respiratory burst. Phosphorylates the transcription activator CREB1 on 'Ser-133' in hippocampal neuron nuclei. May play a role in apoptosis of erythroleukemia cells. In vitro, phosphorylates transcription factor CREM isoform Beta (By similarity). Isoform 1 but not isoform 2 activates CREB1.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.51::31-177 PF00069::Pkinase 99.89::31-177 GO:0044424::intracellular part confident hh_2w4o_A_1::23-66,70-83,108-177 very confident psy14555 222 Q6ZN16::Mitogen-activated protein kinase kinase kinase 15 ::May function in a signal transduction pathway that is activated by various cell stresses and leads to apoptosis.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.11::1-97 PF00069::Pkinase 99.57::1-95 GO:0044430::cytoskeletal part confident hh_2acx_A_1::1-51,53-112 very confident psy1141 189 Q54WZ5::Probable inactive serine/threonine-protein kinase slob2 ::::Dictyostelium discoideum (taxid: 44689) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.64::7-188 PF00069::Pkinase 99.93::6-189 GO:0044464::cell part confident hh_4g3f_A_1::6-29,39-62,69-92,107-134,136-174,176-176,179-189 very confident psy13755 612 P78362::SRSF protein kinase 2 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains and is involved in the phosphorylation of SR splicing factors and the regulation of splicing. Promotes neuronal apoptosis by up-regulating cyclin-D1 (CCND1) expression. This is done by the phosphorylation of SRSF2, leading to the suppression of p53/TP53 phosphorylation thereby relieving the repressive effect of p53/TP53 on cyclin-D1 (CCND1) expression. Phosphorylates ACIN1, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin A1 but not cyclin A2 up-regulation. Plays an essential role in splicesomal B complex formation via the phosphorylation of DDX23/PRP28. Can mediate hepatitis B virus (HBV) core protein phosphorylation. Plays a negative role in the regulation of HBV replication through a mechanism not involving the phosphorylation of the core protein but by reducing the packaging efficiency of the pregenomic RNA (pgRNA) without affecting the formation of the viral core particles.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.86::89-310 PF00069::Pkinase 99.98::89-308 GO:0045071::negative regulation of viral genome replication confident hh_1wak_A_1::62-234 very confident psy6357 635 Q00372::Carbon catabolite-derepressing protein kinase ::Essential for release from glucose repression. It interacts and has functional relationship to the regulatory protein SNF4. Could phosphorylates CAT8.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::227-494 PF00069::Pkinase 100.00::227-492 GO:0045169::fusome confident no hit no match psy16081 493 Q13627::Dual specificity tyrosine-phosphorylation-regulated kinase 1A ::May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.92::121-445 PF00069::Pkinase 100.00::121-440 GO:0045893::positive regulation of transcription, DNA-dependent very confident hh_2vx3_A_1::96-445 very confident psy11727 437 Q13627::Dual specificity tyrosine-phosphorylation-regulated kinase 1A ::May play a role in a signaling pathway regulating nuclear functions of cell proliferation. Phosphorylates serine, threonine and tyrosine residues in its sequence and in exogenous substrates.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.92::112-433 PF00069::Pkinase 100.00::112-430 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_2vx3_A_1::89-436 very confident psy16430 600 Q12852::Mitogen-activated protein kinase kinase kinase 12 ::May be an activator of the JNK/SAPK pathway. Phosphorylates beta-casein, histone 1 and myelin basic protein in vitro.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::263-505 PF00069::Pkinase 100.00::263-504 GO:0046328::regulation of JNK cascade confident hh_3dtc_A_1::257-342,344-404,406-503 very confident psy2006 351 O35491::Dual specificity protein kinase CLK2 ::Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.77::2-319 PF00069::Pkinase 99.96::2-317 GO:0046777::protein autophosphorylation confident hh_2eu9_A_1::2-111,135-169,246-320 very confident psy17424 117 O35491::Dual specificity protein kinase CLK2 ::Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.34::6-115 PF00069::Pkinase 99.63::6-115 GO:0046777::protein autophosphorylation confident hh_2eu9_A_1::6-115 very confident psy6327 351 O54863::Testis-specific serine/threonine-protein kinase 2 ::Testis-specific serine/threonine-protein kinase required during spermatid development. Phosphorylates 'Ser-281' of TSKS and SPAG16. Involved in the late stages of spermatogenesis, during the reconstruction of the cytoplasm. During spermatogenesis, required for the transformation of a ring-shaped structure around the base of the flagellum originating from the chromatoid body.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::9-280 PF00069::Pkinase 100.00::9-278 GO:0046777::protein autophosphorylation confident hh_2w4o_A_1::8-45,51-100,103-111,122-172,174-199,201-226,228-284 very confident psy16951 282 O88697::Serine/threonine-protein kinase 16 ::Membrane-associated protein kinase that phosphorylates on serine and threonine residues. In vitro substrates include DRG1, ENO1 and EIF4EBP1. Also autophosphorylates (By similarity). May be involved in secretory vesicle trafficking or intracellular signaling. May have a role in regulating stromal-epithelial interactions that occur during ductal morphogenesis in the mammary gland. May be involved in TGF-beta signaling. Able to autophosphorylate on Tyr residue; it is however unclear whether it has tyrosine-protein kinase toward other proteins.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.86::28-254 PF00069::Pkinase 100.00::28-254 GO:0046777::protein autophosphorylation confident hh_2buj_A_1::17-95,101-155,159-254 very confident psy2843 113 P13368::Protein sevenless ::Receptor for an extracellular signal required to instruct a cell to differentiate into an R7 photoreceptor. The ligand for sev is the boss (bride of sevenless) protein on the surface of the neighboring R8 cell.::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.63::2-98 PF00069::Pkinase 99.43::1-99 GO:0046777::protein autophosphorylation confident hh_1p4o_A_1::1-16,21-63,75-99 very confident psy2811 108 Q8K3H5::Myosin-IIIa ::Probable actin-based motor with a protein kinase activity. Probably plays a role in vision and hearing.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.41::2-95 PF00069::Pkinase 99.76::2-93 GO:0046777::protein autophosphorylation confident hh_3com_A_1::2-99 very confident psy7825 357 Q9D411::Testis-specific serine/threonine-protein kinase 4 ::May be involved in a signaling pathway during male germ cell development or mature sperm function. Phosphorylates CREB1 on Ser-133 and stimulates downstream signaling.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.96::66-330 PF00069::Pkinase 100.00::66-324 GO:0046777::protein autophosphorylation confident hh_2w4o_A_1::62-102,108-216,223-249,251-330 very confident psy7529 129 F1N9Y5::Tyrosine-protein kinase SYK ::Non-receptor tyrosine kinase which mediates signal transduction downstream of a variety of transmembrane receptors including classical immunoreceptors like the B-cell receptor (BCR). Regulates several biological processes including innate and adaptive immunity, cell adhesion, osteoclast maturation, platelet activation and vascular development. Assembles into signaling complexes with activated receptors at the plasma membrane via interaction between its SH2 domains and the receptor tyrosine-phosphorylated ITAM domains. The association with the receptor can also be indirect and mediated by adapter proteins containing ITAM or partial hemITAM domains. The phosphorylation of the ITAM domains is generally mediated by SRC subfamily kinases upon engagement of the receptor. More rarely signal transduction via SYK could be ITAM-independent. Direct downstream effectors phosphorylated by SYK include VAV1, PLCG1, PI-3-kinase, LCP2 and BLNK. Initially identified as essential in B-cell receptor (BCR) signaling, it is necessary for the maturation of B-cells most probably at the pro-B to pre-B transition. Activated upon BCR engagement, it phosphorylates and activates BLNK an adapter linking the activated BCR to downstream signaling adapters and effectors.::Gallus gallus (taxid: 9031) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.48::16-126 PF00069::Pkinase 99.82::1-125 GO:0048013::ephrin receptor signaling pathway confident hh_2qol_A_1::1-25,27-35,37-126 very confident psy6820 639 D2I3C6::Serine/threonine-protein kinase DCLK2 ::Protein kinase with a significantly reduced Ca(2+)/CAM affinity and dependence compared to other members of the CaMK family. May play a role in the down-regulation of CRE-dependent gene activation probably by phosphorylation of the CREB coactivator CRTC2/TORC2 and the resulting retention of TORC2 in the cytoplasm.::Ailuropoda melanoleuca (taxid: 9646) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::379-637 PF00069::Pkinase 100.00::379-636 GO:0048699::generation of neurons confident hh_2w4o_A_1::374-414,418-512,517-580,582-638 very confident psy2306 335 O60285::NUAK family SNF1-like kinase 1 ::Serine/threonine-protein kinase involved in various processes such as cell adhesion, regulation of cell ploidy and senescence, cell proliferation and tumor progression. Phosphorylates ATM, CASP6, LATS1, PPP1R12A and p53/TP53. Acts as a regulator of cellular senescence and cellular ploidy by mediating phosphorylation of 'Ser-464' of LATS1, thereby controlling its stability. Controls cell adhesion by regulating activity of the myosin protein phosphatase 1 (PP1) complex. Acts by mediating phosphorylation of PPP1R12A subunit of myosin PP1: phosphorylated PPP1R12A then interacts with 14-3-3, leading to reduced dephosphorylation of myosin MLC2 by myosin PP1. May be involved in DNA damage response: phosphorylates p53/TP53 at 'Ser-15' and 'Ser-392' and is recruited to the CDKN1A/WAF1 promoter to participate to transcription activation by p53/TP53. May also act as a tumor malignancy-associated factor by promoting tumor invasion and metastasis under regulation and phosphorylation by AKT1. Suppresses Fas-induced apoptosis by mediating phosphorylation of CASP6, thereby suppressing the activation of the caspase and the subsequent cleavage of CFLAR.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::38-292 PF00069::Pkinase 100.00::38-289 GO:0048699::generation of neurons confident hh_3fe3_A_1::33-74,76-294 very confident psy6346 1238 Q00372::Carbon catabolite-derepressing protein kinase ::Essential for release from glucose repression. It interacts and has functional relationship to the regulatory protein SNF4. Could phosphorylates CAT8.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::192-446 PF00069::Pkinase 100.00::192-443 GO:0048699::generation of neurons confident hh_3fe3_A_1::191-454,457-504 very confident psy6203 568 Q61846::Maternal embryonic leucine zipper kinase ::Serine/threonine-protein kinase involved in various processes such as cell cycle regulation, self-renewal of stem cells, apoptosis and splicing regulation. Has a broad substrate specificity; phosphorylates BCL2L14, CDC25B, MAP3K5/ASK1 and ZNF622. Acts as an activator of apoptosis by phosphorylating and activating MAP3K5/ASK1. Acts as a regulator of cell cycle, notably by mediating phosphorylation of CDC25B, promoting localization of CDC25B to the centrosome and the spindle poles during mitosis. Plays a key role in cell proliferation. Required for proliferation of embryonic and postnatal multipotent neural progenitors. Phosphorylates and inhibits BCL2L14. Also involved in the inhibition of spliceosome assembly during mitosis by phosphorylating ZNF622, thereby contributing to its redirection to the nucleus. May also play a role in primitive hematopoiesis.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::10-264 PF00069::Pkinase 100.00::10-262 GO:0048699::generation of neurons confident hh_3fe3_A_1::6-159,162-291,293-322 very confident psy2579 267 Q84VQ3::CBL-interacting serine/threonine-protein kinase 26 ::CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.::Arabidopsis thaliana (taxid: 3702) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.78::65-265 PF00069::Pkinase 99.95::65-264 GO:0048699::generation of neurons confident hh_3fe3_A_1::59-85,93-161,208-265 very confident psy12076 247 Q925K9::Testis-specific serine/threonine-protein kinase 6 ::Required for sperm production and function. Plays a role in DNA condensation during postmeiotic chromatin remodeling.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::24-230 PF00069::Pkinase 100.00::24-228 GO:0048699::generation of neurons confident hh_2w4o_A_1::21-43,45-61,67-176,179-202,204-231 very confident psy14425 114 Q96RU8::Tribbles homolog 1 ::Interacts with MAPK kinases and regulates activation of MAP kinases. May not display kinase activity.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.31::5-106 PF00069::Pkinase 99.83::2-107 GO:0048699::generation of neurons confident hh_2zmd_A_1::2-111 very confident psy18163 1028 Q9UQ88::Cyclin-dependent kinase 11A ::Appears to play multiple roles in cell cycle progression, cytokinesis and apoptosis. The p110 isoforms have been suggested to be involved in pre-mRNA splicing, potentially by phosphorylating the splicing protein SFRS7. The p58 isoform may act as a negative regulator of normal cell cycle progression.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::364-656 PF00069::Pkinase 100.00::364-654 GO:0050684::regulation of mRNA processing confident hh_1ob3_A_1::362-383,385-432,435-454,458-602,607-656 very confident psy11359 520 Q6P9R2::Serine/threonine-protein kinase OSR1 ::Regulates downstream kinases in response to environmental stress. May also have a function in regulating the actin cytoskeleton.::Mus musculus (taxid: 10090) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.94::31-330 PF00069::Pkinase 100.00::31-327 GO:0050727::regulation of inflammatory response very confident hh_2vwi_A_1::18-65,88-337 very confident psy323 255 Q9UPE1::SRSF protein kinase 3 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.33::7-253 PF00069::Pkinase 99.94::10-253 GO:0050896::response to stimulus confident hh_1q8y_A_1::8-24,28-103,106-185,189-204,206-255 very confident psy322 182 Q9Z0G2::SRSF protein kinase 3 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.36::6-109 PF00069::Pkinase 99.83::6-108 GO:0050896::response to stimulus confident hh_3llt_A_1::7-29,33-59,62-109,116-141,143-160,162-181 very confident psy17559 131 P36507::Dual specificity mitogen-activated protein kinase kinase 2 ::Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases. Activates the ERK1 and ERK2 MAP kinases.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.52::3-105 PF00069::Pkinase 99.87::3-105 GO:0051384::response to glucocorticoid stimulus confident hh_3eqc_A_1::3-114 very confident psy9738 133 Q64303::Serine/threonine-protein kinase PAK 2 ::Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell motility, cell cycle progression, apoptosis or proliferation. Acts as downstream effector of the small GTPases CDC42 and RAC1. Activation by the binding of active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Full-length PAK2 stimulates cell survival and cell growth. Phosphorylates MAPK4 and MAPK6 and activates the downstream target MAPKAPK5, a regulator of F-actin polymerization and cell migration. Phosphorylates JUN and plays an important role in EGF-induced cell proliferation. Phosphorylates many other substrates including histone H4 to promote assembly of H3.3 and H4 into nucleosomes, BAD, ribosomal protein S6, or MBP. Additionally, associates with ARHGEF7 and GIT1 to perform kinase-independent functions such as spindle orientation control during mitosis. On the other hand, apoptotic stimuli such as DNA damage lead to caspase-mediated cleavage of PAK2, generating PAK-2p34, an active p34 fragment that translocates to the nucleus and promotes cellular apoptosis involving the JNK signaling pathway. Caspase-activated PAK2 phosphorylates MKNK1 and reduces cellular translation.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.11::1-112 PF00069::Pkinase 99.44::1-110 GO:0061098::positive regulation of protein tyrosine kinase activity confident hh_3fxz_A_1::1-5,7-20,23-37,39-45,61-131 very confident psy11767 966 Q5F3L1::Ribosomal protein S6 kinase alpha-5 ::Serine/threonine-protein kinase that is required for the mitogen or stress-induced phosphorylation of the transcription factors CREB1 and ATF1 and that contributes to gene activation by histone phosphorylation. Phosphorylates CREB1 and ATF1 in response to mitogenic or stress stimuli such as UV-C irradiation, epidermal growth factor (EGF) and anisomycin. Directly represses transcription via phosphorylation of 'Ser-1' of histone H2A. Phosphorylates 'Ser-10' of histone H3 in response to mitogenics, stress stimuli and EGF, which results in the transcriptional activation of several immediate early genes, including proto-oncogenes c-fos/FOS and c-jun/JUN. May also phosphorylate 'Ser-28' of histone H3. Mediates the mitogen- and stress-induced phosphorylation of high mobility group protein 1 (HMGN1/HMG14).::Gallus gallus (taxid: 9031) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::383-654 PF00069::Pkinase 100.00::382-654 GO:0070887::cellular response to chemical stimulus confident hh_2bdw_A_1::372-378,383-427,429-466,469-546,573-603,608-654,657-663 very confident psy17423 185 Q13523::Serine/threonine-protein kinase PRP4 homolog ::Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.19::15-176 PF00069::Pkinase 99.89::16-175 GO:0071013::catalytic step 2 spliceosome confident hh_2vx3_A_1::8-38,42-50,53-179 very confident psy18117 215 Q60DG4::Serine/threonine-protein kinase Nek4 ::May be involved in plant development processes.::Oryza sativa subsp. japonica (taxid: 39947) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.37::117-215 PF00069::Pkinase 99.75::115-215 GO:0071944::cell periphery confident hh_2w5a_A_1::115-214 very confident psy14894 115 Q6P3K7::Casein kinase I isoform delta-B ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.::Danio rerio (taxid: 7955) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.38::9-82 PF00069::Pkinase 99.34::4-81 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway very confident rp_3sv0_A_1::1-113 very confident psy12792 570 Q8CFE4::SCY1-like protein 2 ::Component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles. May be a serine/threonine-protein kinase. May regulate clathrin-dependent trafficking between the TGN and/or the endosomal system.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.74::31-279 PF00069::Pkinase 100.00::31-276 GO:2000370::positive regulation of clathrin-mediated endocytosis confident hh_3fdn_A_1::27-43,47-72,79-122,125-157,159-214,216-237,240-280 very confident psy12612 116 P46197::Atrial natriuretic peptide receptor 2 ::Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.::Bos taurus (taxid: 9913) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 94.14::2-108 PF07714::Pkinase_Tyr 99.80::2-110 GO:0004383::guanylate cyclase activity confident hh_1qcf_A_1::2-75,80-115 very confident psy1840 423 Q07553::Guanylate cyclase 32E ::::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.52::25-186 PF07714::Pkinase_Tyr 99.94::23-187 GO:0004383::guanylate cyclase activity confident hh_4aoj_A_1::25-45,47-103,107-131,134-148,151-153,155-194 very confident psy7025 205 P09208::Insulin-like receptor ::Has a ligand-stimulated tyrosine-protein kinase activity. Required for cell survival. Regulates body size and organ size by altering cell number and cell size in a cell-autonomous manner. Involved in the development of the embryonic nervous system, and is necessary for axon guidance and targeting in the visual system. Also plays a role in life-span determination.::Drosophila melanogaster (taxid: 7227) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.55::2-99 PF07714::Pkinase_Tyr 99.75::2-100 GO:0004672::protein kinase activity confident hh_3ugc_A_1::2-106 very confident psy10018 680 Q64729::TGF-beta receptor type-1 ::Transmembrane serine/threonine kinase forming with the TGF-beta type II serine/threonine kinase receptor, TGFBR2, the non-promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinogenesis. The formation of the receptor complex composed of 2 TGFBR1 and 2 TGFBR2 molecules symmetrically bound to the cytokine dimer results in the phosphorylation and the activation of TGFBR1 by the constitutively active TGFBR2. Activated TGFBR1 phosphorylates SMAD2 which dissociates from the receptor and interacts with SMAD4. The SMAD2-SMAD4 complex is subsequently translocated to the nucleus where it modulates the transcription of the TGF-beta-regulated genes. This constitutes the canonical SMAD-dependent TGF-beta signaling cascade. Also involved in non-canonical, SMAD-independent TGF-beta signaling pathways. For instance, TGFBR1 induces TRAF6 autoubiquitination which in turn results in MAP3K7 ubiquitination and activation to trigger apoptosis. Also regulates epithelial to mesenchymal transition through a SMAD-independent signaling pathway through PARD6A phosphorylation and activation.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.03::248-381 PF07714::Pkinase_Tyr 99.88::274-379 GO:0004672::protein kinase activity confident hh_3gxj_A_2::432-498,623-678 very confident psy7820 163 O55076::Cyclin-dependent kinase 2 ::Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization.::Cricetulus griseus (taxid: 10029) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.83::8-161 PF07714::Pkinase_Tyr 99.98::9-161 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_3niz_A_1::9-161 very confident psy14889 443 Q90ZK6::Activin receptor type-1 ::On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for activin.::Gallus gallus (taxid: 9031) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::138-424 PF07714::Pkinase_Tyr 100.00::139-425 GO:0005025::transforming growth factor beta receptor activity, type I very confident hh_1b6c_B_1::109-432 very confident psy6593 433 P53668::LIM domain kinase 1 ::Serine/threonine-protein kinase that plays an essential role in the regulation of actin filament dynamics. Acts downstream of several Rho family GTPase signal transduction pathways. Activated by upstream kinases including ROCK1, PAK1 and PAK4, which phosphorylate LIMK1 on a threonine residue located in its activation loop. LIMK1 subsequently phosphorylates and inactivates the actin binding/depolymerizing factors cofilin-1/CFL1, cofilin-2/CFL2 and destrin/DSTN, thereby preventing the cleavage of filamentous actin (F-actin), and stabilizing the actin cytoskeleton. In this way LIMK1 regulates several actin-dependent biological processes including cell motility, cell cycle progression, and differentiation. Phosphorylates TPPP on serine residues, thereby promoting microtubule disassembly. Stimulates axonal outgrowth and may be involved in brain development.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.81::145-372 PF07714::Pkinase_Tyr 100.00::145-374 GO:0005730::nucleolus confident hh_3s95_A_1::120-259,267-394 very confident psy13989 85 P51952::Cyclin-dependent kinase 7 (Fragment) ::Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.68::3-51 PF07714::Pkinase_Tyr 99.09::6-79 GO:0005739::mitochondrion very confident hh_1ua2_A_1::3-71 very confident psy8884 184 P46197::Atrial natriuretic peptide receptor 2 ::Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.67::71-180 PF07714::Pkinase_Tyr 99.57::68-181 GO:0005829::cytosol confident hh_3p86_A_1::62-84,89-182 very confident psy7174 188 Q12126::Serine/threonine-protein kinase crk1 ::Protein kinase essential for cell proliferation, where it is required for completion of cytokinesis. Phosphorylates the C-terminal repeat domain (CTD) of RNA polymerase II.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.34::5-168 PF07714::Pkinase_Tyr 99.94::25-188 GO:0005829::cytosol confident hh_1ua2_A_1::5-53,62-76,78-90,92-126,129-188 very confident psy12580 239 Q13418::Integrin-linked protein kinase ::Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.63::104-238 PF07714::Pkinase_Tyr 99.93::105-237 GO:0005829::cytosol confident rp_3kmu_A_1::93-236 very confident psy5603 455 Q1RMT8::Interleukin-1 receptor-associated kinase 4 ::Serine/threonine-protein kinase that plays a critical role in initiating innate immune response against foreign pathogens. Involved in Toll-like receptor (TLR) and IL-1R signaling pathways. Is rapidly recruited by MYD88 to the receptor-signaling complex upon TLR activation to form the Myddosome together with IRAK2. Phosphorylates initially IRAK1, thus stimulating the kinase activity and intensive autophosphorylation of IRAK1. Phosphorylates E3 ubiquitin ligases Pellino proteins (PELI1, PELI2 and PELI3) to promote pellino-mediated polyubiquitination of IRAK1. Then, the ubiquitin-binding domain of IKBKG/NEMO binds to polyubiquitinated IRAK1 bringing together the IRAK1-MAP3K7/TAK1-TRAF6 complex and the NEMO-IKKA-IKKB complex. In turn, MAP3K7/TAK1 activates IKKs (CHUK/IKKA and IKBKB/IKKB) leading to NF-kappa-B nuclear translocation and activation. Alternatively, phosphorylates TIRAP to promote its ubiquitination and subsequent degradation. Phosphorylates NCF1 and regulates NADPH oxidase activation after LPS stimulation suggesting a similar mechanism during microbial infections.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::173-447 PF07714::Pkinase_Tyr 100.00::175-449 GO:0005829::cytosol confident hh_2w4o_A_1::172-207,223-271,275-299,302-337,342-405,409-410,416-447 very confident psy520 455 Q1RMT8::Interleukin-1 receptor-associated kinase 4 ::Serine/threonine-protein kinase that plays a critical role in initiating innate immune response against foreign pathogens. Involved in Toll-like receptor (TLR) and IL-1R signaling pathways. Is rapidly recruited by MYD88 to the receptor-signaling complex upon TLR activation to form the Myddosome together with IRAK2. Phosphorylates initially IRAK1, thus stimulating the kinase activity and intensive autophosphorylation of IRAK1. Phosphorylates E3 ubiquitin ligases Pellino proteins (PELI1, PELI2 and PELI3) to promote pellino-mediated polyubiquitination of IRAK1. Then, the ubiquitin-binding domain of IKBKG/NEMO binds to polyubiquitinated IRAK1 bringing together the IRAK1-MAP3K7/TAK1-TRAF6 complex and the NEMO-IKKA-IKKB complex. In turn, MAP3K7/TAK1 activates IKKs (CHUK/IKKA and IKBKB/IKKB) leading to NF-kappa-B nuclear translocation and activation. Alternatively, phosphorylates TIRAP to promote its ubiquitination and subsequent degradation. Phosphorylates NCF1 and regulates NADPH oxidase activation after LPS stimulation suggesting a similar mechanism during microbial infections.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::172-447 PF07714::Pkinase_Tyr 100.00::175-449 GO:0005829::cytosol confident hh_2w4o_A_1::172-207,223-271,275-299,302-337,342-405,409-410,416-447 very confident psy3686 296 Q23977::Dual specificity mitogen-activated protein kinase kinase hemipterous ::Required for the epithelial cell sheet movement called dorsal closure (DC), which allows establishment of the dorsal epidermis. Controls the expression in the dorsal epithelium edges of another dorsal closure gene, puckered (puc). Phosphorylates and activates the MAP kinase bsk; bsk signal transduction pathway mediates an immune response and morphogenesis.::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.75::5-187 PF07714::Pkinase_Tyr 99.96::4-187 GO:0005829::cytosol confident no hit no match psy13821 349 Q54TM7::Probable serine/threonine-protein kinase drkD ::::Dictyostelium discoideum (taxid: 44689) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.87::4-321 PF07714::Pkinase_Tyr 100.00::5-254 GO:0005829::cytosol confident hh_3ugc_A_1::3-14,18-39,42-123,125-181,186-211 very confident psy17162 182 Q5E9X2::Dual specificity mitogen-activated protein kinase kinase 6 ::Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. With MAP3K3/MKK3, catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 MAPK11, MAPK12, MAPK13 and MAPK14 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. Especially, MAP2K3/MKK3 and MAP2K6/MKK6 are both essential for the activation of MAPK11 and MAPK13 induced by environmental stress, whereas MAP2K6/MKK6 is the major MAPK11 activator in response to TNF. MAP2K6/MKK6 also phosphorylates and activates PAK6. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Nuclear targets of p38 MAP kinase include the transcription factors ATF2 and ELK1. Within the p38 MAPK signal transduction pathway, MAP3K6/MKK6 mediates phosphorylation of STAT4 through MAPK14 activation, and is therefore required for STAT4 activation and STAT4-regulated gene expression in response to IL-12 stimulation. The pathway is also crucial for IL-6-induced SOCS3 expression and down-regulation of IL-6-mediated gene induction; and for IFNG-dependent gene transcription. Has a role in osteoclast differentiation through NF-kappa-B transactivation by TNFSF11, and in endochondral ossification and since SOX9 is another likely downstream target of the p38 MAPK pathway. MAP2K6/MKK6 mediates apoptotic cell death in thymocytes. Acts also as a regulator for melanocytes dendricity, through the modulation of Rho family GTPases.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.33::4-148 PF07714::Pkinase_Tyr 99.87::4-180 GO:0005829::cytosol confident hh_3com_A_1::3-17,19-22,24-57,61-95,97-105,107-115,120-147,149-181 very confident psy238 218 Q99J45::Nuclear receptor-binding protein ::May play a role in subcellular trafficking between the endoplasmic reticulum and Golgi apparatus through interactions with the Rho-type GTPases.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.63::7-177 PF07714::Pkinase_Tyr 99.93::3-179 GO:0005829::cytosol confident no hit no match psy13291 89 Q9DGE0::Dual specificity mitogen-activated protein kinase kinase 6 ::Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Phosphorylation by MAP2K6 asymmetrically activates p38 on one side of the blastodisc, an event which is necessary for blastomere cleavage.::Danio rerio (taxid: 7955) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.23::22-87 PF07714::Pkinase_Tyr 99.13::20-88 GO:0005829::cytosol confident hh_3fme_A_1::11-86 very confident psy15818 225 Q9VBW3::Tyrosine kinase receptor Cad96Ca ::::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.89::2-217 PF07714::Pkinase_Tyr 100.00::1-224 GO:0005887::integral to plasma membrane confident hh_2pvf_A_1::2-5,7-223 very confident psy13313 50 Q8IVH8::Mitogen-activated protein kinase kinase kinase kinase 3 ::May play a role in the response to environmental stress. Appears to act upstream of the JUN N-terminal pathway.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 90.62::3-42 PF07714::Pkinase_Tyr 98.54::2-42 GO:0006915::apoptotic process confident hh_3com_A_1::2-41 very confident psy9377 106 Q5RFL3::Mitogen-activated protein kinase kinase kinase 7 ::Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signal transduction of TRAF6, various cytokines including interleukin-1 (IL-1), transforming growth factor-beta (TGFB), TGFB-related factors like BMP2 and BMP4, toll-like receptors (TLR), tumor necrosis factor receptor CD40 and B-cell receptor (BCR). Ceramides are also able to activate MAP3K7/TAK1. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K1/MEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs, c-jun N-terminal kinases (JNKs) and I-kappa-B kinase complex (IKK). Both p38 MAPK and JNK pathways control the transcription factors activator protein-1 (AP-1), while nuclear factor-kappa B is activated by IKK. MAP3K7 activates also IKBKB and MAPK8/JNK1 in response to TRAF6 signaling and mediates BMP2-induced apoptosis. In osmotic stress signaling, plays a major role in the activation of MAPK8/JNK1, but not that of NF-kappa-B.::Pongo abelii (taxid: 9601) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.41::2-104 PF07714::Pkinase_Tyr 99.64::4-105 GO:0007250::activation of NF-kappaB-inducing kinase activity confident rp_2eva_A_1::6-63,65-86 very confident psy9381 110 Q5RFL3::Mitogen-activated protein kinase kinase kinase 7 ::Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Mediates signal transduction of TRAF6, various cytokines including interleukin-1 (IL-1), transforming growth factor-beta (TGFB), TGFB-related factors like BMP2 and BMP4, toll-like receptors (TLR), tumor necrosis factor receptor CD40 and B-cell receptor (BCR). Ceramides are also able to activate MAP3K7/TAK1. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade and the p38 MAPK signal transduction cascade through the phosphorylation and activation of several MAP kinase kinases like MAP2K1/MEK1, MAP2K3/MKK3, MAP2K6/MKK6 and MAP2K7/MKK7. These MAP2Ks in turn activate p38 MAPKs, c-jun N-terminal kinases (JNKs) and I-kappa-B kinase complex (IKK). Both p38 MAPK and JNK pathways control the transcription factors activator protein-1 (AP-1), while nuclear factor-kappa B is activated by IKK. MAP3K7 activates also IKBKB and MAPK8/JNK1 in response to TRAF6 signaling and mediates BMP2-induced apoptosis. In osmotic stress signaling, plays a major role in the activation of MAPK8/JNK1, but not that of NF-kappa-B.::Pongo abelii (taxid: 9601) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.61::2-50 PF07714::Pkinase_Tyr 99.58::5-72 GO:0007250::activation of NF-kappaB-inducing kinase activity confident hh_2eva_A_1::3-17,22-87 very confident psy11580 288 P92208::Stress-activated protein kinase JNK ::Responds to activation by environmental stress by phosphorylating a number of transcription factors, primarily components of AP-1 such as Jra and also the transcriptional repressor aop, and thus regulates transcriptional activity. Component of the immune response activated by bacterial infection, and is involved in wound healing and in dorsal closure, a morphogenetic movement during embryogenesis. Controls the expression of a phosphatase, puckered, at the edges of wounded epidermal tissue and in the dorsal epithelium during dorsal closure.::Drosophila melanogaster (taxid: 7227) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.85::84-268 PF07714::Pkinase_Tyr 100.00::61-280 GO:0007258::JUN phosphorylation very confident hh_2xrw_A_1::58-76,81-283 very confident psy698 217 Q6VAB6::Kinase suppressor of Ras 2 ::Location-regulated scaffold connecting MEK to RAF. Blocks MAP3K8 kinase activity and MAP3K8-mediated signaling. Acts as a negative regulator of MAP3K3-mediated activation of ERK, JNK and NF-kappa-B pathways, inhibiting MAP3K3-mediated interleukin-8 production.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.84::35-189 PF07714::Pkinase_Tyr 99.91::25-190 GO:0007426::tracheal outgrowth, open tracheal system confident hh_2y4i_B_1::23-64,66-197,201-214 very confident psy2176 109 Q01887::Tyrosine-protein kinase RYK ::May be a coreceptor along with FZD8 of Wnt proteins, such as WNT1, WNT3, WNT3A and WNT5A. Involved in neuron differentiation, axon guidance, corpus callosum establishment and neurite outgrowth. In response to WNT3 stimulation, receptor C-terminal cleavage occurs in its transmembrane region and allows the C-terminal intracellular product to translocate from the cytoplasm to the nucleus where it plays a crucial role in neuronal development.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.85::34-108 PF07714::Pkinase_Tyr 99.28::32-109 GO:0009605::response to external stimulus confident hh_3c1x_A_1::32-109 very confident psy5539 653 Q9V6K3::Tyrosine-protein kinase transmembrane receptor Ror2 ::Tyrosine-protein kinase receptor that functions during early stages of neuronal development.::Drosophila melanogaster (taxid: 7227) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.89::367-643 PF07714::Pkinase_Tyr 100.00::368-644 GO:0009605::response to external stimulus confident hh_1luf_A_1::344-652 very confident psy17576 101 P32023::cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 ::::Drosophila melanogaster (taxid: 7227) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.39::13-100 PF07714::Pkinase_Tyr 99.53::17-100 GO:0009744::response to sucrose stimulus very confident hh_3a62_A_1::1-71,74-100 very confident psy2131 328 O77708::Calcium/calmodulin-dependent protein kinase type II subunit delta ::Calcium/calmodulin-dependent protein kinase involved in the regulation of Ca(2+) homeostatis and excitation-contraction coupling (ECC) in heart by targeting ion channels, transporters and accessory proteins involved in Ca(2+) influx into the myocyte, Ca(2+) release from the sarcoplasmic reticulum (SR), SR Ca(2+) uptake and Na(+) and K(+) channel transport. Targets also transcription factors and signaling molecules to regulate heart function. In its activated form, is involved in the pathogenesis of dilated cardiomyopathy and heart failure. Contributes to cardiac decompensation and heart failure by regulating SR Ca(2+) release via direct phosphorylation of RYR2 Ca(2+) channel on 'Ser-2808'. In the nucleus, phosphorylates the MEF2 repressor HDAC4, promoting its nuclear export and binding to 14-3-3 protein, and expression of MEF2 and genes involved in the hypertrophic program. Is essential for left ventricular remodeling responses to myocardial infarction. In pathological myocardial remodeling acts downstream of the beta adrenergic receptor signaling cascade to regulate key proteins involved in ECC. Regulates Ca(2+) influx to myocytes by binding and phosphorylating the L-type Ca(2+) channel subunit beta-2 CACNB2. In addition to Ca(2+) channels, can target and regulate the cardiac sarcolemmal Na(+) channel Nav1.5/SCN5A and the K+ channel Kv4.3/KCND3, which contribute to arrhythmogenesis in heart failure. Phosphorylates phospholamban (PLN/PLB), an endogenous inhibitor of SERCA2A/ATP2A2, contributing to the enhancement of SR Ca(2+) uptake that may be important in frequency-dependent acceleration of relaxation (FDAR) and maintenance of contractile function during acidosis. May participate in the modulation of skeletal muscle function in response to exercise, by regulating SR Ca(2+) transport through phosphorylation of PLN/PLB and triadin, a ryanodine receptor-coupling factor.::Oryctolagus cuniculus (taxid: 9986) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::1-315 PF07714::Pkinase_Tyr 100.00::1-325 GO:0009931::calcium-dependent protein serine/threonine kinase activity very confident hh_2bdw_A_1::1-254 very confident psy18063 79 Q69ZM6::Serine/threonine-protein kinase 36 ::Serine/threonine protein kinase which plays an important role in the sonic hedgehog (Shh) pathway by regulating the activity of GLI transcription factors. Controls the activity of the transcriptional regulators GLI1, GLI2 and GLI3 by opposing the effect of SUFU and promoting their nuclear localization. GLI2 requires an additional function of STK36 to become transcriptionally active, but the enzyme does not need to possess an active kinase catalytic site for this to occur. Required for postnatal development, possibly by regulating the homeostasis of cerebral spinal fluid or ciliary function. Essential for construction of the central pair apparatus of motile cilia.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 95.96::4-51 PF07714::Pkinase_Tyr 98.66::8-78 GO:0010468::regulation of gene expression confident hh_1o6l_A_1::4-18,23-78 very confident psy4332 188 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.57::9-171 PF07714::Pkinase_Tyr 99.96::7-175 GO:0016324::apical plasma membrane confident rp_4aoj_A_1::42-112,114-132,140-177 very confident psy3166 228 P35546::Proto-oncogene tyrosine-protein kinase receptor Ret ::Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. Phosphorylates PTK2/FAK1. Regulates both cell death/survival balance and positional information. Required for the molecular mechanisms orchestration during intestine organogenesis; involved in the development of enteric nervous system and renal organogenesis during embryonic life, and promotes the formation of Peyer's patch-like structures, a major component of the gut-associated lymphoid tissue. Modulates cell adhesion via its cleavage by caspase in sympathetic neurons and mediates cell migration in an integrin (e.g. ITGB1 and ITGB3)-dependent manner. Involved in the development of the neural crest. Active in the absence of ligand, triggering apoptosis through a mechanism that requires receptor intracellular caspase cleavage. Act as a dependence receptor; in the presence of the ligand GDNF in somatotrophs (within pituitary), promotes survival and down regulates growth hormone (GH) production, but triggers apoptosis in absence of GDNF. Regulates nociceptor survival and size. Triggers the differentiation of rapidly adapting (RA) mechanoreceptors. Mediator of several diseases such as neuroendocrine cancers; these diseases are characterized by aberrant integrins-regulated cell migration.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.83::12-216 PF07714::Pkinase_Tyr 100.00::13-227 GO:0016477::cell migration confident hh_2xir_A_1::4-35,40-154,156-227 very confident psy7289 422 no hit no match COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::56-313 PF07714::Pkinase_Tyr 100.00::57-325 GO:0016477::cell migration confident no hit no match psy15820 230 Q9VBW3::Tyrosine kinase receptor Cad96Ca ::::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.03::21-168 PF07714::Pkinase_Tyr 99.95::22-198 GO:0030154::cell differentiation confident hh_2xir_A_1::12-206 very confident psy1934 150 O14976::Cyclin-G-associated kinase ::Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.43::7-148 PF07714::Pkinase_Tyr 99.87::3-147 GO:0031323::regulation of cellular metabolic process confident hh_4g3f_A_1::2-40,42-67,70-106,114-149 very confident psy17532 461 P27038::Activin receptor type-2A ::On ligand binding, forms a receptor complex consisting of two type II and two type I transmembrane serine/threonine kinases. Type II receptors phosphorylate and activate type I receptors which autophosphorylate, then bind and activate SMAD transcriptional regulators. Receptor for activin A, activin B and inhibin A.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::114-401 PF07714::Pkinase_Tyr 100.00::114-402 GO:0032927::positive regulation of activin receptor signaling pathway confident hh_3mdy_A_1::110-231,235-330,332-407 very confident psy9318 223 Q63185::Eukaryotic translation initiation factor 2-alpha kinase 1 ::Inhibits protein synthesis at the translation initiation level, in response to various stress conditions, including oxidative stress, heme deficiency, osmotic shock and heat shock. Exerts its function through the phosphorylation of EIF2S1 at 'Ser-48' and 'Ser-51', thus preventing its recycling. Binds hemin forming a 1:1 complex through a cysteine thiolate and histidine nitrogenous coordination. This binding occurs with moderate affinity, allowing it to sense the heme concentration within the cell. Thanks to this unique heme-sensing capacity, plays a crucial role to shut off protein synthesis during acute heme-deficient conditions. In red blood cells (RBCs), controls hemoglobin synthesis ensuring a coordinated regulation of the synthesis of its heme and globin moieties. Thus plays an essential protective role for RBC survival in anemias of iron deficiency. Similarly, in hepatocytes, involved in heme-mediated translational control of CYP2B and CYP3A and possibly other hepatic P450 cytochromes (By similarity). May also contain ER stress during acute heme-deficient conditions.::Rattus norvegicus (taxid: 10116) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.21::1-177 PF07714::Pkinase_Tyr 99.80::1-178 GO:0033554::cellular response to stress confident hh_1zy4_A_1::1-16,18-78,114-180 very confident psy9041 97 Q6FV07::Spindle assembly checkpoint kinase ::Required for high-fidelity chromosome segregation during the later part of each cell cycle. Acts in opposition to the phosphatase PP1. Has a role in attaching the kinetochores to the microtubules and ensuring that sister kinetochores connect to opposite poles. The promotion of bi-orientation is achieved by selectively detaching kinetochore-microtubule attachments that are not under tension. Phosphorylates histone H3 to form H3S10ph during mitosis and meiosis.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.91::14-94 PF07714::Pkinase_Tyr 99.25::18-94 GO:0035175::histone kinase activity (H3-S10 specific) confident hh_2w4o_A_1::15-93 very confident psy1792 186 Q01887::Tyrosine-protein kinase RYK ::May be a coreceptor along with FZD8 of Wnt proteins, such as WNT1, WNT3, WNT3A and WNT5A. Involved in neuron differentiation, axon guidance, corpus callosum establishment and neurite outgrowth. In response to WNT3 stimulation, receptor C-terminal cleavage occurs in its transmembrane region and allows the C-terminal intracellular product to translocate from the cytoplasm to the nucleus where it plays a crucial role in neuronal development.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.59::47-173 PF07714::Pkinase_Tyr 99.76::24-184 GO:0042221::response to chemical stimulus confident hh_3ugc_A_1::29-86,90-109,111-152,154-185 very confident psy796 228 Q7YR43::Epithelial discoidin domain-containing receptor 1 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.::Pan troglodytes (taxid: 9598) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.83::33-213 PF07714::Pkinase_Tyr 99.97::33-214 GO:0042221::response to chemical stimulus confident hh_4aoj_A_1::23-106,108-148,150-170,178-221 very confident psy8984 72 Q99J45::Nuclear receptor-binding protein ::May play a role in subcellular trafficking between the endoplasmic reticulum and Golgi apparatus through interactions with the Rho-type GTPases.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.89::7-72 PF07714::Pkinase_Tyr 99.40::3-72 GO:0042803::protein homodimerization activity confident hh_2w5a_A_1::2-18,21-55,58-72 very confident psy3347 245 Q16513::Serine/threonine-protein kinase N2 ::PKC-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. Plays a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion, tumor cell invasion and transcription activation signaling processes. Phosphorylates CTTN in hyaluronan-induced astrocytes and hence decreases CTTN ability to associates with filamentous actin. Phosphorylates HDAC5, therefore lead to impair HDAC5 import. Direct RhoA target required for the regulation of the maturation of primordial junctions into apical junction formation in bronchial epithelial cells. Required for G2/M phases of the cell cycle progression and abscission during cytokinesis in a ECT2-dependent manner. Stimulates FYN kinase activity that is required for establishment of skin cell-cell adhesion during keratinocytes differentiation. Regulates epithelial bladder cells speed and direction of movement during cell migration and tumor cell invasion. Inhibits Akt pro-survival-induced kinase activity. Mediates Rho protein-induced transcriptional activation via the c-fos serum response factor (SRF). Phosphorylates HCV NS5B leading to stimulation of HCV RNA replication.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.86::1-228 PF07714::Pkinase_Tyr 100.00::1-244 GO:0042826::histone deacetylase binding very confident hh_2i0e_A_1::1-35,39-111,115-121,144-245 very confident psy12581 153 Q13418::Integrin-linked protein kinase ::Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.29::9-146 PF07714::Pkinase_Tyr 99.95::3-148 GO:0043195::terminal bouton confident rp_3kmu_A_1::29-153 very confident psy14267 553 P35761::Dual specificity protein kinase TTK ::Essential for chromosome alignment by enhancing AURKB activity (via direct CDCA8 phosphorylation) at the centromere, and for the mitotic checkpoint (By similarity). Phosphorylates proteins on serine, threonine, and tyrosine. Probably associated with cell proliferation. May play some role in the control of cell proliferation or differentiation and could be involved in modulating different levels of signal transduction pathways.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::258-545 PF07714::Pkinase_Tyr 100.00::259-546 GO:0043229::intracellular organelle confident hh_2zmd_A_1::250-279,281-281,284-297,299-330,333-355,361-400,411-508,515-545 very confident psy15406 134 O08815::STE20-like serine/threonine-protein kinase ::Mediates apoptosis and actin stress fiber dissolution.::Rattus norvegicus (taxid: 10116) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.21::42-130 PF07714::Pkinase_Tyr 99.78::9-134 GO:0043234::protein complex confident hh_3com_A_1::40-134 very confident psy6905 527 P80192::Mitogen-activated protein kinase kinase kinase 9 ::Serine/threonine kinase which acts as an essential component of the MAP kinase signal transduction pathway. Plays an important role in the cascades of cellular responses evoked by changes in the environment. Once activated, acts as an upstream activator of the MKK/JNK signal transduction cascade through the phosphorylation of MAP2K4/MKK4 and MAP2K7/MKK7 which in turn activate the JNKs. The MKK/JNK signaling pathway regulates stress response via activator protein-1 (JUN) and GATA4 transcription factors. Plays also a role in mitochondrial death signaling pathway, including the release cytochrome c, leading to apoptosis.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::119-374 PF07714::Pkinase_Tyr 100.00::120-375 GO:0043234::protein complex confident hh_3dtc_A_1::112-377 very confident psy2929 131 Q9URY1::Serine/threonine-protein kinase ppk16 ::Has a role in meiosis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.56::12-116 PF07714::Pkinase_Tyr 99.89::2-118 GO:0043234::protein complex confident hh_2w4o_A_1::12-116 very confident psy1789 499 Q01887::Tyrosine-protein kinase RYK ::May be a coreceptor along with FZD8 of Wnt proteins, such as WNT1, WNT3, WNT3A and WNT5A. Involved in neuron differentiation, axon guidance, corpus callosum establishment and neurite outgrowth. In response to WNT3 stimulation, receptor C-terminal cleavage occurs in its transmembrane region and allows the C-terminal intracellular product to translocate from the cytoplasm to the nucleus where it plays a crucial role in neuronal development.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.91::224-487 PF07714::Pkinase_Tyr 100.00::225-488 GO:0043410::positive regulation of MAPK cascade confident hh_2yfx_A_1::218-293,295-322,324-494 very confident psy16840 413 P16066::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.55::130-297 PF07714::Pkinase_Tyr 99.94::100-298 GO:0043679::axon terminus confident hh_4aoj_A_1::126-136,139-141,144-154,156-190,192-214,219-254,256-261,265-305 very confident psy15086 167 Q55EI8::Probable serine/threonine-protein kinase DDB_G0268876 ::::Dictyostelium discoideum (taxid: 44689) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.14::3-115 PF07714::Pkinase_Tyr 99.69::6-116 GO:0043679::axon terminus confident hh_2y4i_B_1::5-55,58-72,79-82,84-122 very confident psy11286 335 Q00944::Focal adhesion kinase 1 ::Non-receptor protein-tyrosine kinase that plays an essential role in regulating cell migration, adhesion, spreading, reorganization of the actin cytoskeleton, formation and disassembly of focal adhesions and cell protrusions, cell cycle progression, cell proliferation and apoptosis. Required for early embryonic development, embryonic angiogenesis, normal cardiomyocyte migration and proliferation, and normal heart development. Regulates axon growth and neuronal cell migration, axon branching and synapse formation; required for normal development of the nervous system. Plays a role in osteogenesis and differentiation of osteoblasts. Functions in integrin signal transduction, but also in signaling downstream of numerous growth factor receptors, G-protein coupled receptors (GPCR), ephrin receptors, netrin receptors and LDL receptors. Forms multisubunit signaling complexes with SRC and SRC family members upon activation; this leads to the phosphorylation of additional tyrosine residues, creating binding sites for scaffold proteins, effectors and substrates. Regulates numerous signaling pathways. Promotes activation of phosphatidylinositol 3-kinase and the AKT1 signaling cascade. Promotes activation of MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling cascade. Promotes localized and transient activation of guanine nucleotide exchange factors (GEFs) and GTPase-activating proteins (GAPs), and thereby modulates the activity of Rho family GTPases. Signaling via CAS family members mediates activation of RAC1. Regulates P53/TP53 activity and stability. Phosphorylates SRC; this increases SRC kinase activity. Isoform 2 (FRNK) does not contain a kinase domain and inhibits PTK2/FAK1 phosphorylation and signaling.::Gallus gallus (taxid: 9031) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 94.08::209-323 PF07714::Pkinase_Tyr 98.79::209-308 GO:0044446::intracellular organelle part confident hh_2j0j_A_1::1-116,118-230,232-265,277-284,286-301,303-322 very confident psy5690 434 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.81::2-256 PF07714::Pkinase_Tyr 100.00::2-259 GO:0044763::single-organism cellular process confident hh_1p4o_A_1::1-108,150-191,194-213,221-262 very confident psy2311 266 O70146::Dual specificity testis-specific protein kinase 1 ::Dual specificity protein kinase activity catalyzing autophosphorylation and phosphorylation of exogenous substrates on both serine/threonine and tyrosine residues. Probably plays a central role at and after the meiotic phase of spermatogenesis.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.41::2-102 PF07714::Pkinase_Tyr 99.94::2-260 GO:0045177::apical part of cell confident hh_4aoj_A_1::2-35,41-58,156-198,208-264 very confident psy10556 69 Q7YR43::Epithelial discoidin domain-containing receptor 1 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell attachment to the extracellular matrix, remodeling of the extracellular matrix, cell migration, differentiation, survival and cell proliferation. Collagen binding triggers a signaling pathway that involves SRC and leads to the activation of MAP kinases. Regulates remodeling of the extracellular matrix by up-regulation of the matrix metalloproteinases MMP2, MMP7 and MMP9, and thereby facilitates cell migration and wound healing. Promotes smooth muscle cell migration, and thereby contributes to arterial wound healing. Also plays a role in tumor cell invasion. Phosphorylates PTPN11. Required for normal blastocyst implantation during pregnancy, for normal mammary gland differentiation and normal lactation. Required for normal ear morphology and normal hearing.::Pan troglodytes (taxid: 9598) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.71::1-65 PF07714::Pkinase_Tyr 99.12::2-67 GO:0045211::postsynaptic membrane confident rp_4aoj_A_1::5-51 very confident psy697 157 Q3UVC0::Kinase suppressor of Ras 2 ::Location-regulated scaffold connecting MEK to RAF. Blocks MAP3K8 kinase activity and MAP3K8-mediated signaling. Acts as a negative regulator of MAP3K3-mediated activation of ERK, JNK and NF-kappa-B pathways, inhibiting MAP3K3-mediated interleukin-8 production.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.46::2-154 PF07714::Pkinase_Tyr 99.89::2-154 GO:0046328::regulation of JNK cascade confident hh_2y4i_B_1::1-31,33-106,129-152 very confident psy4991 122 O55047::Serine/threonine-protein kinase tousled-like 2 ::Testis-specific isoforms may play a role in spermatogenesis. Highly expressed in embryos throughout development.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.44::1-121 PF07714::Pkinase_Tyr 99.86::1-121 GO:0046777::protein autophosphorylation confident hh_2y0a_A_1::1-41,43-68,81-104,107-121 very confident psy8478 88 P13368::Protein sevenless ::Receptor for an extracellular signal required to instruct a cell to differentiate into an R7 photoreceptor. The ligand for sev is the boss (bride of sevenless) protein on the surface of the neighboring R8 cell.::Drosophila melanogaster (taxid: 7227) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.06::2-84 PF07714::Pkinase_Tyr 99.63::2-87 GO:0046777::protein autophosphorylation confident hh_1p4o_A_1::2-86 very confident psy2769 257 P67827::Casein kinase I isoform alpha ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.::Bos taurus (taxid: 9913) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.86::10-232 PF07714::Pkinase_Tyr 100.00::10-233 GO:0046777::protein autophosphorylation confident hh_3sv0_A_1::1-241,243-256 very confident psy11491 314 P78368::Casein kinase I isoform gamma-2 ::Serine/threonine-protein kinase. Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling (By similarity). Phosphorylates COL4A3BP/CERT, MTA1 and SMAD3. Involved in brain development and vesicular trafficking and neurotransmitter releasing from small synaptic vesicles. Regulates fast synaptic transmission mediated by glutamate. SMAD3 phosphorylation promotes its ligand-dependent ubiquitination and subsequent proteasome degradation, thus inhibiting SMAD3-mediated TGF-beta responses. Hyperphosphorylation of the serine-repeat motif of COL4A3BP/CERT leads to its inactivation by dissociation from the Golgi complex, thus down-regulating ER-to-Golgi transport of ceramide and sphingomyelin synthesis.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.92::46-239 PF07714::Pkinase_Tyr 99.91::12-241 GO:0046777::protein autophosphorylation confident rp_2izr_A_1::158-213,215-261 very confident psy9535 593 Q1RMT8::Interleukin-1 receptor-associated kinase 4 ::Serine/threonine-protein kinase that plays a critical role in initiating innate immune response against foreign pathogens. Involved in Toll-like receptor (TLR) and IL-1R signaling pathways. Is rapidly recruited by MYD88 to the receptor-signaling complex upon TLR activation to form the Myddosome together with IRAK2. Phosphorylates initially IRAK1, thus stimulating the kinase activity and intensive autophosphorylation of IRAK1. Phosphorylates E3 ubiquitin ligases Pellino proteins (PELI1, PELI2 and PELI3) to promote pellino-mediated polyubiquitination of IRAK1. Then, the ubiquitin-binding domain of IKBKG/NEMO binds to polyubiquitinated IRAK1 bringing together the IRAK1-MAP3K7/TAK1-TRAF6 complex and the NEMO-IKKA-IKKB complex. In turn, MAP3K7/TAK1 activates IKKs (CHUK/IKKA and IKBKB/IKKB) leading to NF-kappa-B nuclear translocation and activation. Alternatively, phosphorylates TIRAP to promote its ubiquitination and subsequent degradation. Phosphorylates NCF1 and regulates NADPH oxidase activation after LPS stimulation suggesting a similar mechanism during microbial infections.::Bos taurus (taxid: 9913) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::114-387 PF07714::Pkinase_Tyr 100.00::114-388 GO:0046777::protein autophosphorylation confident hh_2w4o_A_1::113-146,156-156,163-211,215-238,241-276,281-344,348-353,359-386 very confident psy11428 160 Q38997::SNF1-related protein kinase catalytic subunit alpha KIN10 ::Catalytic subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase. In vitro, KIN10 exhibits kinase activity on sucrose phosphate synthase and the kinase activity is inhibited by PRL1. May be a subunit of a SCF ubiquitin ligase complex and thus be involved in proteasomal ubiquitination.::Arabidopsis thaliana (taxid: 3702) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.82::8-157 PF07714::Pkinase_Tyr 99.59::5-158 GO:0046777::protein autophosphorylation confident hh_2w4o_A_1::10-84,118-134,142-158 very confident psy12228 258 Q9I8X3::Fibroblast growth factor receptor 3 ::Tyrosine-protein kinase that acts as cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of cell proliferation, differentiation and apoptosis. Plays an essential role in the regulation of chondrocyte differentiation, proliferation and apoptosis, and is required for normal skeleton development. Regulates both osteogenesis and postnatal bone mineralization by osteoblasts. Promotes apoptosis in chondrocytes, but can also promote cancer cell proliferation. Phosphorylates PLCG1, CBL and FRS2. Ligand binding leads to the activation of several signaling cascades. Activation of PLCG1 leads to the production of the cellular signaling molecules diacylglycerol and inositol 1,4,5-trisphosphate. Phosphorylation of FRS2 triggers recruitment of GRB2, GAB1, PIK3R1 and SOS1, and mediates activation of RAS, MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling pathway, as well as of the AKT1 signaling pathway.::Danio rerio (taxid: 7955) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.73::73-255 PF07714::Pkinase_Tyr 99.96::72-255 GO:0046777::protein autophosphorylation confident rp_1t46_A_1::78-208 very confident psy5927 441 Q9NWZ3::Interleukin-1 receptor-associated kinase 4 ::Serine/threonine-protein kinase that plays a critical role in initiating innate immune response against foreign pathogens. Involved in Toll-like receptor (TLR) and IL-1R signaling pathways. Is rapidly recruited by MYD88 to the receptor-signaling complex upon TLR activation to form the Myddosome together with IRAK2. Phosphorylates initially IRAK1, thus stimulating the kinase activity and intensive autophosphorylation of IRAK1. Phosphorylates E3 ubiquitin ligases Pellino proteins (PELI1, PELI2 and PELI3) to promote pellino-mediated polyubiquitination of IRAK1. Then, the ubiquitin-binding domain of IKBKG/NEMO binds to polyubiquitinated IRAK1 bringing together the IRAK1-MAP3K7/TAK1-TRAF6 complex and the NEMO-IKKA-IKKB complex. In turn, MAP3K7/TAK1 activates IKKs (CHUK/IKKA and IKBKB/IKKB) leading to NF-kappa-B nuclear translocation and activation. Alternatively, phosphorylates TIRAP to promote its ubiquitination and subsequent degradation. Phosphorylates NCF1 and regulates NADPH oxidase activation after LPS stimulation suggesting a similar mechanism during microbial infections.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::147-422 PF07714::Pkinase_Tyr 100.00::149-423 GO:0046777::protein autophosphorylation confident hh_2w4o_A_1::142-180,192-243,247-272,275-308,313-375,385-421 very confident psy1683 124 Q9V9J3::Tyrosine-protein kinase Src42A ::Essential for correct eye morphogenesis (ommatidial R7 neuron formation), this requires the Ras1/MAPK signal transduction pathway. May be involved in the regulation of cytoskeleton organization and cell-cell contacts in developing ommatidia.::Drosophila melanogaster (taxid: 7227) very confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.94::2-117 PF07714::Pkinase_Tyr 99.90::2-119 GO:0046777::protein autophosphorylation very confident rp_1qcf_A_1::5-119 very confident psy7023 364 P15127::Insulin receptor ::Receptor tyrosine kinase which mediates the pleiotropic actions of insulin. Binding of insulin leads to phosphorylation of several intracellular substrates, including, insulin receptor substrates (IRS1, 2, 3, 4), SHC, GAB1, CBL and other signaling intermediates. Each of these phosphorylated proteins serve as docking proteins for other signaling proteins that contain Src-homology-2 domains (SH2 domain) that specifically recognize different phosphotyrosines residues, including the p85 regulatory subunit of PI3K and SHP2. Phosphorylation of IRSs proteins lead to the activation of two main signaling pathways: the PI3K-AKT/PKB pathway, which is responsible for most of the metabolic actions of insulin, and the Ras-MAPK pathway, which regulates expression of some genes and cooperates with the PI3K pathway to control cell growth and differentiation. Binding of the SH2 domains of PI3K to phosphotyrosines on IRS1 leads to the activation of PI3K and the generation of phosphatidylinositol-(3, 4, 5)-triphosphate (PIP3), a lipid second messenger, which activates several PIP3-dependent serine/threonine kinases, such as PDPK1 and subsequently AKT/PKB. The net effect of this pathway is to produce a translocation of the glucose transporter SLC2A4/GLUT4 from cytoplasmic vesicles to the cell membrane to facilitate glucose transport. Moreover, upon insulin stimulation, activated AKT/PKB is responsible for: anti-apoptotic effect of insulin by inducing phosphorylation of BAD; regulates the expression of gluconeogenic and lipogenic enzymes by controlling the activity of the winged helix or forkhead (FOX) class of transcription factors. Another pathway regulated by PI3K-AKT/PKB activation is mTORC1 signaling pathway which regulates cell growth and metabolism and integrates signals from insulin. AKT mediates insulin-stimulated protein synthesis by phosphorylating TSC2 thereby activating mTORC1 pathway. The Ras/RAF/MAP2K/MAPK pathway is mainly involved in mediating cell growth, survival and cellular differentiation of insulin. Phosphorylated IRS1 recruits GRB2/SOS complex, which triggers the activation of the Ras/RAF/MAP2K/MAPK pathway. In addition to binding insulin, the insulin receptor can bind insulin-like growth factors (IGFI and IGFII). When present in a hybrid receptor with IGF1R, binds IGF1.::Rattus norvegicus (taxid: 10116) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.92::122-351 PF07714::Pkinase_Tyr 100.00::123-360 GO:0048009::insulin-like growth factor receptor signaling pathway confident hh_1p4o_A_1::110-357 very confident psy2787 251 O54967::Activated CDC42 kinase 1 ::Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.70::21-174 PF07714::Pkinase_Tyr 99.98::1-175 GO:0048699::generation of neurons confident hh_1u46_A_1::2-47,50-182 very confident psy2316 69 O60285::NUAK family SNF1-like kinase 1 ::Serine/threonine-protein kinase involved in various processes such as cell adhesion, regulation of cell ploidy and senescence, cell proliferation and tumor progression. Phosphorylates ATM, CASP6, LATS1, PPP1R12A and p53/TP53. Acts as a regulator of cellular senescence and cellular ploidy by mediating phosphorylation of 'Ser-464' of LATS1, thereby controlling its stability. Controls cell adhesion by regulating activity of the myosin protein phosphatase 1 (PP1) complex. Acts by mediating phosphorylation of PPP1R12A subunit of myosin PP1: phosphorylated PPP1R12A then interacts with 14-3-3, leading to reduced dephosphorylation of myosin MLC2 by myosin PP1. May be involved in DNA damage response: phosphorylates p53/TP53 at 'Ser-15' and 'Ser-392' and is recruited to the CDKN1A/WAF1 promoter to participate to transcription activation by p53/TP53. May also act as a tumor malignancy-associated factor by promoting tumor invasion and metastasis under regulation and phosphorylation by AKT1. Suppresses Fas-induced apoptosis by mediating phosphorylation of CASP6, thereby suppressing the activation of the caspase and the subsequent cleavage of CFLAR.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.16::3-67 PF07714::Pkinase_Tyr 99.53::2-67 GO:0048699::generation of neurons confident hh_2y0a_A_1::2-67 very confident psy15108 223 Q13308::Inactive tyrosine-protein kinase 7 ::Inactive tyrosine kinase involved in Wnt signaling pathway. Component of both the non-canonical (also known as the Wnt/planar cell polarity signaling) and the canonical Wnt signaling pathway. Functions in cell adhesion, cell migration, cell polarity, proliferation, actin cytoskeleton reorganization and apoptosis. Has a role in embryogenesis, epithelial tissue organization and angiogenesis.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.73::18-212 PF07714::Pkinase_Tyr 100.00::17-213 GO:0048699::generation of neurons confident hh_2qol_A_1::17-38,53-174,176-219 very confident psy14019 124 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.29::10-107 PF07714::Pkinase_Tyr 99.65::13-111 GO:0048699::generation of neurons confident hh_2yfx_A_1::13-46,48-68,75-114 very confident psy7505 394 Q80YE4::Serine/threonine-protein kinase LMTK1 ::May be involved in neuronal differentiation.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.93::87-356 PF07714::Pkinase_Tyr 100.00::88-358 GO:0048699::generation of neurons confident hh_3i6u_A_1::84-108,116-160,162-186,192-249,252-272,277-298,300-356 very confident psy14426 119 Q96RU8::Tribbles homolog 1 ::Interacts with MAPK kinases and regulates activation of MAP kinases. May not display kinase activity.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.45::18-116 PF07714::Pkinase_Tyr 99.86::4-117 GO:0048699::generation of neurons confident hh_2zmd_A_1::3-109,111-117 very confident psy320 202 Q9UPE1::SRSF protein kinase 3 ::Serine/arginine-rich protein-specific kinase which specifically phosphorylates its substrates at serine residues located in regions rich in arginine/serine dipeptides, known as RS domains. Phosphorylates the SR splicing factor SRSF1 and the lamin-B receptor (LBR) in vitro. Required for normal muscle development.::Homo sapiens (taxid: 9606) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.70::4-182 PF07714::Pkinase_Tyr 99.93::4-164 GO:0050896::response to stimulus confident hh_2eu9_A_1::4-33,38-86,88-106,109-122,125-143,150-164,171-184 very confident psy17476 513 P08630::Tyrosine-protein kinase Btk29A ::Required for proper ring canal development. Also required for the development of male genitalia and for adult survival.::Drosophila melanogaster (taxid: 7227) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 98.87::2-58 PF07714::Pkinase_Tyr 99.79::1-272 GO:0051179::localization confident hh_2qol_A_1::1-16,19-59,71-74,87-96,155-167,194-273 very confident psy14717 125 Q02750::Dual specificity mitogen-activated protein kinase kinase 1 ::Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates RAS and this initiates RAF1 activation. RAF1 then further activates the dual-specificity protein kinases MAP2K1/MEK1 and MAP2K2/MEK2. Both MAP2K1/MEK1 and MAP2K2/MEK2 function specifically in the MAPK/ERK cascade, and catalyze the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in the extracellular signal-regulated kinases MAPK3/ERK1 and MAPK1/ERK2, leading to their activation and further transduction of the signal within the MAPK/ERK cascade. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation, predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements. One target of the MAPK/ERK cascade is peroxisome proliferator-activated receptor gamma (PPARG), a nuclear receptor that promotes differentiation and apoptosis. MAP2K1/MEK1 has been shown to export PPARG from the nucleus. The MAPK/ERK cascade is also involved in the regulation of endosomal dynamics, including lysosome processing and endosome cycling through the perinuclear recycling compartment (PNRC), as well as in the fragmentation of the Golgi apparatus during mitosis.::Homo sapiens (taxid: 9606) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.27::32-122 PF07714::Pkinase_Tyr 99.25::32-123 GO:0051384::response to glucocorticoid stimulus confident hh_3eqc_A_1::15-24,33-123 very confident psy7592 246 Q9JJX8::Serine/threonine-protein kinase 32B ::::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.90::3-245 PF07714::Pkinase_Tyr 100.00::2-245 GO:0051447::negative regulation of meiotic cell cycle confident hh_4fr4_A_1::2-8,12-94,100-178,181-246 very confident psy3822 138 Q8CFE4::SCY1-like protein 2 ::Component of AP2-containing clathrin coated structures at the plasma membrane or of endocytic coated vesicles. May be a serine/threonine-protein kinase. May regulate clathrin-dependent trafficking between the TGN and/or the endosomal system.::Mus musculus (taxid: 10090) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 97.86::14-127 PF07714::Pkinase_Tyr 99.31::7-127 GO:2000370::positive regulation of clathrin-mediated endocytosis confident hh_2y94_A_1::14-41,43-66,102-119,121-136 confident psy16843 810 Q60592::Microtubule-associated serine/threonine-protein kinase 2 ::Appears to link the dystrophin/utrophin network with microtubule filaments via the syntrophins. Phosphorylation of DMD or UTRN may modulate their affinities for associated proteins. Functions in a multi-protein complex in spermatid maturation. Regulates lipopolysaccharide-induced IL-12 synthesis in macrophages by forming a complex with TRAF6, resulting in the inhibition of TRAF6 NF-kappa-B activation.::Mus musculus (taxid: 10090) confident COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.95::366-641 PF08926::DUF1908 100.00::43-329 GO:0043234::protein complex confident hh_1v9v_A_1::169-192,199-282 very confident psy7310 561 no hit no match COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.87::288-560 PF09745::DUF2040 100.00::61-184 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_1ua2_A_1::287-296,298-335,341-434,436-517,520-561 very confident psy501 962 Q27032::Cell division control protein 2 homolog ::Plays a key role in the control of the eukaryotic cell cycle. It is required in higher cells for entry into S-phase and mitosis. Component of the kinase complex that phosphorylates the repetitive C-terminus of RNA polymerase II.::Theileria parva (taxid: 5875) portable COG0515::SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] 99.76::348-555 PF09766::FimP 99.98::818-962 GO:0005829::cytosol confident hh_2w4o_A_1::309-396,398-477,479-557,559-561 very confident psy3862 671 A4SJY8::GMP reductase ::Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.::Aeromonas salmonicida (strain A449) (taxid: 382245) confident COG0516::GuaB IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism] 99.81::291-374 PF00478::IMPDH 100.00::293-666 GO:0055114::oxidation-reduction process confident hh_2c6q_A_1::12-185,239-273,331-337,445-485,579-579,581-604,611-666 very confident psy7160 67 P49915::GMP synthase [glutamine-hydrolyzing] ::Involved in the de novo synthesis of guanine nucleotides which are not only essential for DNA and RNA synthesis, but also provide GTP, which is involved in a number of cellular processes important for cell division.::Homo sapiens (taxid: 9606) confident COG0519::GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] 99.80::2-59 PF00958::GMP_synt_C 99.83::2-60 GO:0005829::cytosol confident hh_2vxo_A_1::2-45,51-66 very confident psy7153 131 P49915::GMP synthase [glutamine-hydrolyzing] ::Involved in the de novo synthesis of guanine nucleotides which are not only essential for DNA and RNA synthesis, but also provide GTP, which is involved in a number of cellular processes important for cell division.::Homo sapiens (taxid: 9606) confident COG0519::GuaA GMP synthase, PP-ATPase domain/subunit [Nucleotide transport and metabolism] 100.00::10-117 PF02540::NAD_synthase 99.59::54-122 GO:0005829::cytosol confident rp_2vxo_A_1::1-127 very confident psy7992 131 Q29197::40S ribosomal protein S9 (Fragment) ::::Sus scrofa (taxid: 9823) very confident COG0522::RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] 99.94::10-131 PF00163::Ribosomal_S4 98.63::8-103 GO:0008284::positive regulation of cell proliferation very confident hh_3iz6_C_1::1-4,7-131 very confident psy4234 177 Q6ZWN5::40S ribosomal protein S9 ::::Mus musculus (taxid: 10090) confident COG0522::RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] 99.91::7-177 PF00163::Ribosomal_S4 98.65::9-149 GO:0008284::positive regulation of cell proliferation very confident hh_3iz6_C_1::7-95,137-177 very confident psy7990 76 P55935::40S ribosomal protein S9 ::::Drosophila melanogaster (taxid: 7227) very confident COG0522::RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] 99.81::1-54 PF01479::S4 98.93::1-36 GO:0008284::positive regulation of cell proliferation confident hh_3iz6_C_1::1-76 very confident psy4238 67 P55935::40S ribosomal protein S9 ::::Drosophila melanogaster (taxid: 7227) very confident COG0522::RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] 99.38::2-45 PF01479::S4 96.99::3-25 GO:0022627::cytosolic small ribosomal subunit very confident hh_3iz6_C_1::2-67 very confident psy13908 149 Q3T0M3::U3 small nucleolar ribonucleoprotein protein IMP3 ::Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing.::Bos taurus (taxid: 9913) confident COG0522::RpsD Ribosomal protein S4 and related proteins [Translation, ribosomal structure and biogenesis] 100.00::1-147 PF01479::S4 99.16::108-148 GO:0034457::Mpp10 complex confident hh_3iz6_C_1::1-45,47-148 very confident psy7718 184 Q9BRT8::COBW domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG0523::Putative GTPases (G3E family) [General function prediction only] 100.00::20-184 PF02492::cobW 99.96::21-153 GO:0005737::cytoplasm confident rp_1nij_A_1::17-58,66-68,70-151 very confident psy14735 340 P36945::Ribokinase ::::Bacillus subtilis (strain 168) (taxid: 224308) confident COG0524::RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] 100.00::16-327 PF00294::PfkB 100.00::14-317 GO:0005829::cytosol confident hh_1tyy_A_1::12-31,43-89,91-135,140-167,171-212,218-250,253-259,261-285,288-328 very confident psy8082 379 P36945::Ribokinase ::::Bacillus subtilis (strain 168) (taxid: 224308) confident COG0524::RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] 100.00::16-334 PF00294::PfkB 100.00::14-327 GO:0005829::cytosol confident hh_3hj6_A_1::2-37,42-89,91-114,116-138,141-167,171-213,219-250,253-259,261-285,289-298,308-331 very confident psy6977 239 P55262::Adenosine kinase ::ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides.::Cricetulus griseus (taxid: 10029) confident COG0524::RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] 100.00::1-238 PF00294::PfkB 100.00::1-239 GO:0005829::cytosol confident hh_1bx4_A_1::1-42,45-238 very confident psy6978 112 P55262::Adenosine kinase ::ATP dependent phosphorylation of adenosine and other related nucleoside analogs to monophosphate derivatives. Serves as a potential regulator of concentrations of extracellular adenosine and intracellular adenine nucleotides.::Cricetulus griseus (taxid: 10029) confident COG0524::RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] 97.87::8-103 PF00294::PfkB 97.61::8-104 GO:0005829::cytosol confident rp_1bx4_A_1::1-74 very confident psy8856 312 Q57849::Uncharacterized sugar kinase MJ0406 ::::Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) confident COG0524::RbsK Sugar kinases, ribokinase family [Carbohydrate transport and metabolism] 100.00::2-306 PF00294::PfkB 100.00::2-295 GO:0032567::dGTP binding confident hh_3b1n_A_1::1-75,77-230,232-310 very confident psy1860 659 Q54YD4::Probable isoleucine--tRNA ligase, cytoplasmic ::::Dictyostelium discoideum (taxid: 44689) confident COG0525::ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::14-658 PF00133::tRNA-synt_1 100.00::2-396 GO:0005829::cytosol confident hh_1wz2_A_1::3-36,42-99,102-135,137-180,182-236,238-251,259-261,263-274,276-281,285-337,339-360,362-370,380-385,390-396,400-422,426-427,429-487,493-493,497-531,537-581,584-586 very confident psy953 164 Q9Z1Q9::Valine--tRNA ligase ::::Mus musculus (taxid: 10090) confident COG0525::ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1-144 PF00133::tRNA-synt_1 100.00::1-144 GO:0005829::cytosol confident hh_1gax_A_1::1-144,149-158 very confident psy2888 7365 A4G1V2::Valine--tRNA ligase ::Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner.::Herminiimonas arsenicoxydans (taxid: 204773) confident COG0525::ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] 100.00::1866-2778 PF02092::tRNA_synt_2f 100.00::6663-7224 GO:0005829::cytosol confident hh_1j5w_A_2::6410-6591,6603-6681 very confident psy4160 160 P83876::Thioredoxin-like protein 4A ::Essential role in pre-mRNA splicing.::Homo sapiens (taxid: 9606) very confident COG0526::TrxA Thiol-disulfide isomerase and thioredoxins [Posttranslational modification, protein turnover, chaperones / Energy production and conversion] 95.67::43-107 PF02966::DIM1 100.00::32-154 GO:0071011::precatalytic spliceosome very confident hh_1qgv_A_1::43-160 very confident psy17388 272 Q9KP21::Adenylyl-sulfate kinase ::Catalyzes the synthesis of activated sulfate.::Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) confident COG0529::CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] 100.00::6-197 PF01583::APS_kinase 100.00::21-177 GO:0016310::phosphorylation confident hh_1x6v_B_1::7-11,14-271 very confident psy2713 143 Q8TFH0::Probable 6-phosphofructo-2-kinase PB17E12.14c ::Synthesis of fructose 2,6-bisphosphate.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0529::CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] 99.81::2-138 PF01591::6PF2K 99.98::5-142 GO:0005829::cytosol confident hh_2axn_A_1::5-109,111-140 very confident psy733 97 P48765::Sodium/calcium exchanger 1 ::Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.::Bos taurus (taxid: 9913) confident COG0530::ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] 99.79::3-80 PF01699::Na_Ca_ex 99.67::2-82 GO:0005874::microtubule very confident hh_3v5u_A_2::3-48,50-80 very confident psy11989 342 P57103::Sodium/calcium exchanger 3 ::Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.::Homo sapiens (taxid: 9606) confident COG0530::ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] 99.90::54-283 PF01699::Na_Ca_ex 99.73::143-281 GO:0005874::microtubule confident hh_3v5u_A_1::56-87,106-135,139-160,164-190,194-225,230-232,237-240,244-247,249-286 confident psy11346 219 Q9U6A0::Sodium/potassium/calcium exchanger Nckx30C ::May function in the removal and maintenance of calcium homeostasis during signaling in the adult and in signaling events during embryogenesis and patterning of imaginal disks. Transports one Ca(2+) and 1 K(+) in exchange for 4 Na(+).::Drosophila melanogaster (taxid: 7227) portable COG0530::ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] 99.92::16-166 PF01699::Na_Ca_ex 99.86::30-161 GO:0005886::plasma membrane confident hh_3v5u_A_2::22-107,111-116,121-163 very confident psy6733 257 Q9VN12::Probable sodium/potassium/calcium exchanger CG1090 ::May function in the removal and maintenance of calcium homeostasis. Transports one Ca(2+) and 1 K(+) in exchange for 4 Na(+).::Drosophila melanogaster (taxid: 7227) confident COG0530::ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] 99.86::94-238 PF01699::Na_Ca_ex 99.82::99-237 GO:0006816::calcium ion transport confident hh_3v5u_A_2::94-179,188-189,194-208,212-239 very confident psy7326 182 Q01728::Sodium/calcium exchanger 1 ::Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.::Rattus norvegicus (taxid: 10116) portable COG0530::ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] 99.72::72-165 PF01699::Na_Ca_ex 99.58::84-168 GO:0070509::calcium ion import confident hh_3v5u_A_1::76-133,135-168 very confident psy11338 206 Q9VN12::Probable sodium/potassium/calcium exchanger CG1090 ::May function in the removal and maintenance of calcium homeostasis. Transports one Ca(2+) and 1 K(+) in exchange for 4 Na(+).::Drosophila melanogaster (taxid: 7227) portable COG0530::ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] 99.88::46-200 PF01699::Na_Ca_ex 99.81::54-201 GO:0070509::calcium ion import confident hh_3v5u_A_1::46-71,77-142,156-156,161-175,178-200 very confident psy2839 196 Q9U6A0::Sodium/potassium/calcium exchanger Nckx30C ::May function in the removal and maintenance of calcium homeostasis during signaling in the adult and in signaling events during embryogenesis and patterning of imaginal disks. Transports one Ca(2+) and 1 K(+) in exchange for 4 Na(+).::Drosophila melanogaster (taxid: 7227) confident COG0530::ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism] 99.67::99-192 PF01699::Na_Ca_ex 99.47::114-192 GO:0070588::calcium ion transmembrane transport confident hh_3v5u_A_2::114-193 confident psy13614 118 Q2UVJ5::Cation-chloride cotransporter 1 ::Cation/chloride cotransporter that mediates potassium-chloride and sodium-chloride cotransports. Involved in plant development and Cl(-) homeostasis. May be involved in long distance Cl(-) transport. Does not function as an H(+)-dependent cotransporter.::Arabidopsis thaliana (taxid: 3702) confident COG0531::PotE Amino acid transporters [Amino acid transport and metabolism] 99.75::3-118 PF00324::AA_permease 99.73::2-118 GO:0006813::potassium ion transport confident hh_4djk_A_1::2-53,56-106,109-118 confident psy5317 101 Q13621::Solute carrier family 12 member 1 ::Electrically silent transporter system. Mediates sodium and chloride reabsorption. Plays a vital role in the regulation of ionic balance and cell volume.::Homo sapiens (taxid: 9606) portable COG0531::PotE Amino acid transporters [Amino acid transport and metabolism] 97.41::26-88 PF00324::AA_permease 97.87::25-95 GO:0008324::cation transmembrane transporter activity confident hh_4djk_A_1::28-64,67-93 portable psy9036 143 P55011::Solute carrier family 12 member 2 ::Electrically silent transporter system. Mediates sodium and chloride reabsorption. Plays a vital role in the regulation of ionic balance and cell volume.::Homo sapiens (taxid: 9606) confident COG0531::PotE Amino acid transporters [Amino acid transport and metabolism] 91.78::27-109 PF00324::AA_permease 97.66::38-110 GO:0008511::sodium:potassium:chloride symporter activity confident hh_4djk_A_1::28-44,46-54,59-69,71-94,97-108 portable psy931 108 Q8BGK6::Y+L amino acid transporter 2 ::Involved in the sodium-independent uptake of dibasic amino acids and sodium-dependent uptake of some neutral amino acids. Requires co-expression with SLC3A2/4F2hc to mediate the uptake of arginine, leucine and glutamine. Also acts as an arginine/glutamine exchanger, following an antiport mechanism for amino acid transport, influencing arginine release in exchange for extracellular amino acids. Plays a role in nitric oxide synthesis via transport of L-arginine. Involved in the transport of L-arginine in monocytes. Reduces uptake of ornithine in retinal pigment epithelial cells.::Mus musculus (taxid: 10090) confident COG0531::PotE Amino acid transporters [Amino acid transport and metabolism] 99.53::3-107 PF13520::AA_permease_2 99.67::7-107 GO:0003333::amino acid transmembrane transport confident hh_4djk_A_1::8-22,24-51,53-107 confident psy5072 114 Q8BGK6::Y+L amino acid transporter 2 ::Involved in the sodium-independent uptake of dibasic amino acids and sodium-dependent uptake of some neutral amino acids. Requires co-expression with SLC3A2/4F2hc to mediate the uptake of arginine, leucine and glutamine. Also acts as an arginine/glutamine exchanger, following an antiport mechanism for amino acid transport, influencing arginine release in exchange for extracellular amino acids. Plays a role in nitric oxide synthesis via transport of L-arginine. Involved in the transport of L-arginine in monocytes. Reduces uptake of ornithine in retinal pigment epithelial cells.::Mus musculus (taxid: 10090) confident COG0531::PotE Amino acid transporters [Amino acid transport and metabolism] 99.49::8-113 PF13520::AA_permease_2 99.66::7-113 GO:0005887::integral to plasma membrane confident hh_4djk_A_1::10-30,32-58,60-113 confident psy4780 156 O43246::Cationic amino acid transporter 4 ::Involved in the transport of the cationic amino acids (arginine, lysine and ornithine).::Homo sapiens (taxid: 9606) confident COG0531::PotE Amino acid transporters [Amino acid transport and metabolism] 98.60::1-122 PF13520::AA_permease_2 98.78::1-122 GO:0015181::arginine transmembrane transporter activity confident hh_3gia_A_1::1-30,41-62,65-66,80-122,124-126 confident psy4669 139 Q39H30::Translation initiation factor IF-2 ::One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.::Burkholderia sp. (strain 383) (taxid: 269483) portable COG0532::InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] 99.73::84-132 PF00005::ABC_tran 98.71::79-121 GO:0000049::tRNA binding confident hh_3izy_P_1::84-131 confident psy10504 286 Q80ZJ1::Ras-related protein Rap-2a ::Small GTP-binding protein which cycles between a GDP-bound inactive and a GTP-bound active form. In its active form interacts with and regulates several effectors including MAP4K4, MINK1 and TNIK. Part of a signaling complex composed of NEDD4, RAP2A and TNIK which regulates neuronal dendrite extension and arborization during development. More generally, it is part of several signaling cascades and may regulate cytoskeletal rearrangements, cell migration, cell adhesion and cell spreading.::Mus musculus (taxid: 10090) very confident COG0532::InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] 99.87::102-268 PF00071::Ras 99.97::106-267 GO:0030336::negative regulation of cell migration very confident hh_1c1y_A_1::103-222,224-267 very confident psy7275 150 no hit no match COG0532::InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] 98.27::4-91 PF03029::ATP_bind_1 99.22::1-86 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy9896 145 O60841::Eukaryotic translation initiation factor 5B ::Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.::Homo sapiens (taxid: 9606) confident COG0532::InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] 99.91::2-140 PF03144::GTP_EFTU_D2 98.23::39-117 GO:0005829::cytosol confident hh_1g7s_A_1::6-122,126-139 very confident psy4665 673 Q16D38::Translation initiation factor IF-2 ::One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.::Roseobacter denitrificans (strain ATCC 33942 / OCh 114) (taxid: 375451) confident COG0532::InfB Translation initiation factor 2 (IF-2; GTPase) [Translation, ribosomal structure and biogenesis] 100.00::112-667 PF11987::IF-2 99.95::456-553 GO:0043024::ribosomal small subunit binding confident hh_3izy_P_1::113-256,298-388,395-396,398-406,409-645,647-658 very confident psy16095 241 Q0VCI1::Probable tRNA threonylcarbamoyladenosine biosynthesis protein OSGEP ::Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.::Bos taurus (taxid: 9913) confident COG0533::QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] 100.00::2-241 PF00814::Peptidase_M22 100.00::78-241 GO:0000408::EKC/KEOPS complex confident hh_3eno_A_1::1-22,78-87,89-226,230-240 very confident psy9394 339 A4G2A7::Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp ::Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.::Herminiimonas arsenicoxydans (taxid: 204773) very confident COG0533::QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones] 100.00::1-339 PF00814::Peptidase_M22 100.00::24-310 GO:0005829::cytosol confident hh_3eno_A_1::1-21,24-32,36-127,129-130,132-148,150-193,195-202,206-226,233-324,326-339 very confident psy1086 654 Q9I7M2::GTP-binding protein 10 homolog ::May be involved in the ribosome maturation process.::Drosophila melanogaster (taxid: 7227) confident COG0536::Obg Predicted GTPase [General function prediction only] 100.00::41-376 PF01018::GTP1_OBG 100.00::43-175 GO:0044444::cytoplasmic part confident hh_1udx_A_1::42-86,88-88,92-265,276-313,315-327,345-345,347-357,359-374 very confident psy3327 125 P32084::Uncharacterized HIT-like protein Synpcc7942_1390 ::::Synechococcus elongatus (strain PCC 7942) (taxid: 1140) very confident COG0537::Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] 100.00::14-120 PF01230::HIT 99.96::23-119 GO:0000118::histone deacetylase complex very confident hh_3n1s_A_1::13-124 very confident psy14209 119 Q28BZ2::Histidine triad nucleotide-binding protein 3 ::Hydrolyzes phosphoramidate and acyl-adenylate substrates.::Xenopus tropicalis (taxid: 8364) confident COG0537::Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] 100.00::1-101 PF01230::HIT 99.96::10-101 GO:0004780::sulfate adenylyltransferase (ADP) activity confident hh_3l7x_A_1::1-105 very confident psy5902 103 Q5RF69::Histidine triad nucleotide-binding protein 1 ::Hydrolyzes adenosine 5'-monophosphoramidate substrates such as AMP-morpholidate, AMP-N-alanine methyl ester, AMP-alpha-acetyl lysine methyl ester and AMP-NH2.::Pongo abelii (taxid: 9601) confident COG0537::Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] 99.94::5-98 PF01230::HIT 99.93::3-97 GO:0005777::peroxisome confident hh_3o1c_A_1::5-17,21-47,50-103 very confident psy5899 201 Q5RF69::Histidine triad nucleotide-binding protein 1 ::Hydrolyzes adenosine 5'-monophosphoramidate substrates such as AMP-morpholidate, AMP-N-alanine methyl ester, AMP-alpha-acetyl lysine methyl ester and AMP-NH2.::Pongo abelii (taxid: 9601) confident COG0537::Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] 99.95::92-196 PF01230::HIT 99.91::100-195 GO:0006355::regulation of transcription, DNA-dependent confident hh_3o1c_A_1::90-201 very confident psy9252 346 Q5RF69::Histidine triad nucleotide-binding protein 1 ::Hydrolyzes adenosine 5'-monophosphoramidate substrates such as AMP-morpholidate, AMP-N-alanine methyl ester, AMP-alpha-acetyl lysine methyl ester and AMP-NH2.::Pongo abelii (taxid: 9601) portable COG0537::Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] 99.95::171-276 PF01230::HIT 99.89::180-276 GO:0044444::cytoplasmic part confident hh_3n1s_A_1::169-183,185-281 very confident psy7292 62 no hit no match COG0537::Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] 99.81::2-58 PF01230::HIT 99.73::2-56 GO:0044763::single-organism cellular process confident hh_3o1c_A_1::2-62 very confident psy9251 121 P32084::Uncharacterized HIT-like protein Synpcc7942_1390 ::::Synechococcus elongatus (strain PCC 7942) (taxid: 1140) confident COG0537::Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] 99.98::8-115 PF01230::HIT 99.96::17-114 GO:0050896::response to stimulus confident hh_3o1c_A_1::6-38,40-120 very confident psy12302 303 P65098::Isocitrate dehydrogenase [NADP] ::::Mycobacterium bovis (taxid: 1765) confident COG0538::Icd Isocitrate dehydrogenases [Energy production and conversion] 100.00::32-302 PF00180::Iso_dh 98.83::137-302 GO:0005777::peroxisome confident hh_1lwd_A_1::35-68,138-302 very confident psy12325 83 P65098::Isocitrate dehydrogenase [NADP] ::::Mycobacterium bovis (taxid: 1765) confident COG0538::Icd Isocitrate dehydrogenases [Energy production and conversion] 99.06::38-81 no hit no match GO:0005777::peroxisome confident hh_3us8_A_1::30-81 very confident psy9769 1026 F1LZ52::Kelch-like protein 3 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a regulator of ion transport in the distal nephron. The BCR(KLHL3) complex may act by mediating ubiquitination of SLC12A3/NCC, thereby regulating SLC12A3/NCC subcellular location at the cell membrane.::Rattus norvegicus (taxid: 10116) confident COG0539::RpsA Ribosomal protein S1 [Translation, ribosomal structure and biogenesis] 100.00::520-1015 PF00651::BTB 99.70::56-161 GO:0005829::cytosol confident hh_2xn4_A_1::307-491,768-784,787-868 very confident psy4400 157 P07259::Protein URA2 ::This protein is a "fusion" protein encoding three enzymatic activities of the pyrimidine pathway (GATase, CPSase, and ATCase).::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0540::PyrB Aspartate carbamoyltransferase, catalytic chain [Nucleotide transport and metabolism] 99.87::13-146 PF00185::OTCace 99.88::38-141 GO:0004088::carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity confident hh_1pg5_A_1::20-27,30-47,49-63,72-143 very confident psy4311 190 Q6AYB5::Signal recognition particle 54 kDa protein ::Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein).::Rattus norvegicus (taxid: 10116) confident COG0541::Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] 100.00::2-185 PF00448::SRP54 99.83::101-185 GO:0005829::cytosol confident bp_2j37_W_1::1-162 very confident psy4310 203 Q6AYB5::Signal recognition particle 54 kDa protein ::Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein).::Rattus norvegicus (taxid: 10116) confident COG0541::Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion] 100.00::3-167 PF02978::SRP_SPB 100.00::53-158 GO:0043021::ribonucleoprotein complex binding confident rp_2j37_W_1::24-202 very confident psy1695 202 O77277::Torsin-like protein ::May serve as a molecular chaperone assisting in the proper folding of secreted and/or membrane proteins.::Drosophila melanogaster (taxid: 7227) portable COG0542::clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] 100.00::12-198 PF06309::Torsin 99.95::1-128 GO:0005635::nuclear envelope confident hh_1r6b_X_1::12-77,86-104,106-108,111-174 confident psy2887 899 Q9PGC1::Chaperone protein ClpB ::Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.::Xylella fastidiosa (taxid: 2371) confident COG0542::clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] 100.00::8-677 PF07724::AAA_2 99.91::416-579 GO:0006986::response to unfolded protein confident rp_1jbk_A_1::15-165 very confident psy14504 951 Q9PGC1::Chaperone protein ClpB ::Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.::Xylella fastidiosa (taxid: 2371) confident COG0542::clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] 100.00::11-728 PF07724::AAA_2 99.91::468-631 GO:0006986::response to unfolded protein confident hh_2p65_A_1::24-208 very confident psy14500 938 Q9PGC1::Chaperone protein ClpB ::Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK.::Xylella fastidiosa (taxid: 2371) confident COG0542::clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] 100.00::7-715 PF07724::AAA_2 99.90::455-617 GO:0006986::response to unfolded protein confident hh_2p65_A_1::10-195 very confident psy1308 607 Q9WTT2::Caseinolytic peptidase B protein homolog ::May function as a regulatory ATPase and be related to secretion/protein trafficking process.::Rattus norvegicus (taxid: 10116) very confident COG0542::clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones] 100.00::234-580 PF07724::AAA_2 99.93::296-487 GO:0034605::cellular response to heat confident hh_1qvr_A_1::261-324,326-429,431-432,436-436,457-459,461-476,478-516,518-583 very confident psy8368 372 A6QQ71::Peptidyl-prolyl cis-trans isomerase FKBP6 ::PPIases accelerate the folding of proteins.::Bos taurus (taxid: 9913) portable COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.91::11-122 PF00254::FKBP_C 99.77::26-119 GO:0005528::FK506 binding confident hh_2if4_A_1::12-58,60-122,124-127,134-140,147-232,237-276,280-313 very confident psy4027 149 P0CP96::FK506-binding protein 2 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) confident COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.95::45-149 PF00254::FKBP_C 99.65::76-146 GO:0005829::cytosol confident hh_3o5e_A_1::64-149 very confident psy4385 473 P27124::Peptidyl-prolyl cis-trans isomerase FKBP4 ::Immunophilin protein with PPIase and co-chaperone activities. Component of unligated steroid receptors heterocomplexes thought interaction with heat-shock protein 90 (HSP90) (By similarity). May play a role in the intracellular trafficking of heterooligomeric forms of steroid hormone receptors between cytoplasm and nuclear compartments. The isomerase activity controls neuronal growth cones via regulation of TRPC1 channel opening (By similarity). Acts also as a regulator of microtubule dynamics by inhibiting MAPT/TAU ability to promote microtubule assembly.::Oryctolagus cuniculus (taxid: 9986) confident COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.95::27-136 PF00254::FKBP_C 99.84::42-134 GO:0005829::cytosol confident hh_1q1c_A_1::15-259 very confident psy4022 222 P54397::39 kDa FK506-binding nuclear protein ::Accelerates the folding of proteins. May function in a signal transduction cascade during early development.::Drosophila melanogaster (taxid: 7227) confident COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.95::122-222 PF00254::FKBP_C 99.84::44-134 GO:0005829::cytosol confident hh_1q1c_A_1::23-61,63-145,148-154,159-222 very confident psy5048 319 Q2UPT7::FK506-binding protein 2 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) confident COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.93::29-140 PF00254::FKBP_C 99.79::47-137 GO:0005829::cytosol confident hh_3o5e_A_1::33-57,59-141 very confident psy16059 67 P48375::12 kDa FK506-binding protein ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Binds to ligand-free TGF beta type I receptor, from which it is released upon a ligand-induced, type II receptor mediated phosphorylation of the type I receptor. Binding is inhibitory to the signaling pathways of the TGF beta family ligands.::Drosophila melanogaster (taxid: 7227) very confident COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.79::2-65 PF00254::FKBP_C 99.54::13-66 GO:0031398::positive regulation of protein ubiquitination very confident hh_3o5e_A_1::2-66 very confident psy18101 126 Q14318::Peptidyl-prolyl cis-trans isomerase FKBP8 ::Constitutively inactive PPiase, which becomes active when bound to calmodulin and calcium. Seems to act as a chaperone for BCL2, targets it to the mitochondria and modulates its phosphorylation state. The BCL2/FKBP8/calmodulin/calcium complex probably interferes with the binding of BCL2 to its targets. The active form of FKBP8 may therefore play a role in the regulation of apoptosis.::Homo sapiens (taxid: 9606) portable COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.90::36-123 PF00254::FKBP_C 99.78::51-121 GO:0043231::intracellular membrane-bounded organelle confident hh_2d9f_A_1::24-120 very confident psy1750 214 Q14318::Peptidyl-prolyl cis-trans isomerase FKBP8 ::Constitutively inactive PPiase, which becomes active when bound to calmodulin and calcium. Seems to act as a chaperone for BCL2, targets it to the mitochondria and modulates its phosphorylation state. The BCL2/FKBP8/calmodulin/calcium complex probably interferes with the binding of BCL2 to its targets. The active form of FKBP8 may therefore play a role in the regulation of apoptosis.::Homo sapiens (taxid: 9606) portable COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.94::47-153 PF00254::FKBP_C 99.87::62-150 GO:0043231::intracellular membrane-bounded organelle confident hh_1q1c_A_1::1-79,81-87,89-160 very confident psy18096 131 Q3B7U9::Peptidyl-prolyl cis-trans isomerase FKBP8 ::Constitutively inactive PPiase, which becomes active when bound to calmodulin and calcium. Seems to act as a chaperone for BCL2, targets it to the mitochondria and modulates its phosphorylation state. The BCL2/FKBP8/calmodulin/calcium complex probably interferes with the binding of BCL2 to its targets. The active form of FKBP8 may therefore play a role in the regulation of apoptosis.::Rattus norvegicus (taxid: 10116) portable COG0545::FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover, chaperones] 99.16::2-49 PF13414::TPR_11 99.09::68-115 GO:0044424::intracellular part confident hh_1p5q_A_1::1-130 very confident psy4436 171 Q9D967::Magnesium-dependent phosphatase 1 ::Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.::Mus musculus (taxid: 10090) very confident COG0546::Gph Predicted phosphatases [General function prediction only] 99.90::55-156 PF12689::Acid_PPase 100.00::15-170 GO:0016311::dephosphorylation very confident hh_2wm8_A_1::12-83,85-171 very confident psy8911 280 Q9D967::Magnesium-dependent phosphatase 1 ::Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.::Mus musculus (taxid: 10090) confident COG0546::Gph Predicted phosphatases [General function prediction only] 99.86::164-265 PF12689::Acid_PPase 99.97::125-279 GO:0016791::phosphatase activity confident hh_2wm8_A_1::125-190,192-279 very confident psy6288 166 Q94529::Probable pseudouridine-5'-monophosphatase ::Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation.::Drosophila melanogaster (taxid: 7227) confident COG0546::Gph Predicted phosphatases [General function prediction only] 99.93::23-159 PF13419::HAD_2 99.86::22-130 GO:0044237::cellular metabolic process confident rp_3l5k_A_1::29-76,78-164 very confident psy1333 79 Q5E7J6::Thymidine phosphorylase ::The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis.::Vibrio fischeri (strain ATCC 700601 / ES114) (taxid: 312309) confident COG0547::TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism] 99.95::1-79 PF02885::Glycos_trans_3N 99.58::1-40 GO:0016763::transferase activity, transferring pentosyl groups confident hh_2dsj_A_1::1-79 very confident psy8714 562 O95985::DNA topoisomerase 3-beta-1 ::Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity). Possesses negatively supercoiled DNA relaxing activity.::Homo sapiens (taxid: 9606) confident COG0550::TopA Topoisomerase IA [DNA replication, recombination, and repair] 100.00::6-562 PF01131::Topoisom_bac 100.00::166-562 GO:0000793::condensed chromosome confident hh_2gai_A_1::1-13,19-31,48-48,51-67,70-77,81-82,84-86,88-108,110-132,139-197,206-244,247-247,250-269,271-272,276-353,359-360,364-368,372-453,456-523,525-562 very confident psy8717 69 O95985::DNA topoisomerase 3-beta-1 ::Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity). Possesses negatively supercoiled DNA relaxing activity.::Homo sapiens (taxid: 9606) confident COG0550::TopA Topoisomerase IA [DNA replication, recombination, and repair] 99.89::1-65 PF01131::Topoisom_bac 99.86::1-65 GO:0000793::condensed chromosome confident hh_1i7d_A_1::1-61 very confident psy8716 141 O95985::DNA topoisomerase 3-beta-1 ::Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone (By similarity). Possesses negatively supercoiled DNA relaxing activity.::Homo sapiens (taxid: 9606) portable COG0551::TopA Zn-finger domain associated with topoisomerase type I [DNA replication, recombination, and repair] 92.06::21-118 PF01396::zf-C4_Topoisom 96.46::82-119 GO:0000793::condensed chromosome confident hh_4ayb_P_1::21-35 portable psy2881 302 Q92GB8::Signal recognition particle receptor FtsY ::Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.::Rickettsia conorii (strain ATCC VR-613 / Malish 7) (taxid: 272944) confident COG0552::FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] 100.00::2-300 PF00448::SRP54 100.00::99-300 GO:0005829::cytosol confident hh_2yhs_A_1::1-301 very confident psy11993 630 P06625::Signal recognition particle receptor subunit alpha ::Component of the SRP (signal recognition particle) receptor. Ensures, in conjunction with the signal recognition particle, the correct targeting of the nascent secretory proteins to the endoplasmic reticulum membrane system.::Canis familiaris (taxid: 9615) very confident COG0552::FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion] 100.00::324-630 PF04086::SRP-alpha_N 100.00::26-251 GO:0005811::lipid particle very confident hh_2fh5_A_1::1-128,131-156 very confident psy2047 233 Q04692::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 ::Helicase that possesses intrinsic ATP-dependent nucleosome-remodeling activity. Requires for the restoration of heterochromatin organization after replication. Acts at replication sites to facilitates the maintenance of heterochromatin by directing H3 and H4 histones deacetylation, H3K9 tri-methylation (H3K9me3) and restoration of silencing.::Mus musculus (taxid: 10090) portable COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.87::1-233 PF00176::SNF2_N 99.53::3-110 GO:0000785::chromatin confident hh_3mwy_W_1::22-82,85-115,121-128,133-136,166-233 very confident psy7773 1281 no hit no match COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::540-1023 PF00176::SNF2_N 100.00::549-844 GO:0003714::transcription corepressor activity confident hh_3mwy_W_1::532-692,694-735,749-814,820-1069 very confident psy10683 429 Q24368::Chromatin-remodeling complex ATPase chain Iswi ::Energy-transducing component of the chromatin-remodeling complexes NURF (nucleosome-remodeling factor), ACF (ATP-utilizing chromatin assembly and remodeling factor), and CHRAC (chromatin accessibility complex). NURF catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. It is required for homeotic gene expression, proper larval blood cell development, normal male X chromosome morphology, ecdysteroid signaling and metamorphosis.::Drosophila melanogaster (taxid: 7227) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::176-428 PF00176::SNF2_N 100.00::184-428 GO:0005677::chromatin silencing complex confident hh_3mwy_W_1::169-372,376-429 very confident psy2050 131 Q04692::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 ::Helicase that possesses intrinsic ATP-dependent nucleosome-remodeling activity. Requires for the restoration of heterochromatin organization after replication. Acts at replication sites to facilitates the maintenance of heterochromatin by directing H3 and H4 histones deacetylation, H3K9 tri-methylation (H3K9me3) and restoration of silencing.::Mus musculus (taxid: 10090) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.76::8-130 PF00176::SNF2_N 99.89::15-129 GO:0005829::cytosol confident hh_3mwy_W_1::9-60,63-130 very confident psy12466 680 Q9DG67::DNA repair and recombination protein RAD54B ::Involved in DNA repair and mitotic recombination.::Gallus gallus (taxid: 9031) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::368-672 PF00176::SNF2_N 100.00::377-669 GO:0005856::cytoskeleton confident hh_1z3i_X_1::363-671 very confident psy14708 513 A2AJK6::Chromodomain-helicase-DNA-binding protein 7 ::Probable transcription regulator.::Mus musculus (taxid: 10090) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::324-509 PF00176::SNF2_N 100.00::321-506 GO:0030154::cell differentiation confident hh_3mwy_W_1::15-49,69-96,158-201,304-312,317-483,485-509 very confident psy13010 573 Q9ULG1::DNA helicase INO80 ::DNA helicase and probable main scaffold component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair; according to PubMed:20687897 the contribution to DNA double-strand break repair appears to be largely indirect through transcriptional regulation. Recruited by YY1 to YY1-activated genes, where it acts as an essential coactivator. Binds DNA. In vitro, has double stranded DNA-dependent ATPase activity. Involved in UV-damage excision repair, DNA replication and chromosome segregation during normal cell division cycle.::Homo sapiens (taxid: 9606) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::35-572 PF00176::SNF2_N 100.00::44-346 GO:0030307::positive regulation of cell growth confident hh_1z3i_X_1::31-135,139-310,314-317,324-354,375-376,379-385,456-457,469-469,475-475,488-572 very confident psy13032 190 Q9VDY1::Putative DNA helicase Ino80 ::DNA helicase and probable main scaffold component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Drosophila melanogaster (taxid: 7227) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.84::1-149 PF00176::SNF2_N 99.91::2-187 GO:0031011::Ino80 complex confident hh_1z63_A_1::1-19,34-54,56-74,87-185 very confident psy10448 1001 Q22516::Chromodomain-helicase-DNA-binding protein 3 homolog ::Chromatin-remodeling protein that function in vulval cell fate determination.::Caenorhabditis elegans (taxid: 6239) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::245-830 PF00176::SNF2_N 100.00::252-546 GO:0032502::developmental process confident hh_3mwy_W_1::136-201,210-210,217-224,232-242,245-350,359-590,643-723,761-840 very confident psy5647 755 O76460::DNA repair and recombination protein RAD54-like ::Involved in mitotic DNA repair and meiotic recombination. Functions in the recombinational DNA repair pathway. Essential for interhomolog gene conversion (GC), but may have a less important role in intersister GC than spn-A/Rad51. In the presence of DNA, spn-A/Rad51 enhances the ATPase activity of okr/Rad54.::Drosophila melanogaster (taxid: 7227) very confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::141-667 PF00176::SNF2_N 100.00::150-460 GO:0036310::annealing helicase activity very confident hh_1z3i_X_1::92-434,438-483,488-741 very confident psy1090 169 O74842::ATP-dependent helicase fft2 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.95::1-169 PF00176::SNF2_N 100.00::2-169 GO:0042393::histone binding confident hh_3mwy_W_1::1-81,90-100,102-169 very confident psy1544 1331 A7Z019::Transcription activator BRG1 ::Transcriptional coactivator cooperating with nuclear hormone receptors to potentiate transcriptional activation. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-fOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth. SMARCA4/BAF190A may promote neural stem cell self-renewal/proliferation by enhancing Notch-dependent proliferative signals, while concurrently making the neural stem cell insensitive to SHH-dependent differentiating cues. Acts as a corepressor of ZEB1 to regulate E-cadherin transcription and is required for induction of epithelial-mesenchymal transition (EMT) by ZEB1.::Bos taurus (taxid: 9913) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::543-1033 PF00176::SNF2_N 100.00::560-854 GO:0045111::intermediate filament cytoskeleton confident hh_3mwy_W_1::542-703,705-746,760-825,831-1057 very confident psy14604 209 Q6PDQ2::Chromodomain-helicase-DNA-binding protein 4 ::Component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin by deacetylating histones.::Mus musculus (taxid: 10090) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.70::101-191 PF00176::SNF2_N 99.79::108-189 GO:0045111::intermediate filament cytoskeleton confident hh_3mwy_W_1::91-98,101-202 very confident psy10684 288 Q24368::Chromatin-remodeling complex ATPase chain Iswi ::Energy-transducing component of the chromatin-remodeling complexes NURF (nucleosome-remodeling factor), ACF (ATP-utilizing chromatin assembly and remodeling factor), and CHRAC (chromatin accessibility complex). NURF catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. It is required for homeotic gene expression, proper larval blood cell development, normal male X chromosome morphology, ecdysteroid signaling and metamorphosis.::Drosophila melanogaster (taxid: 7227) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.94::17-195 PF00271::Helicase_C 99.67::92-172 GO:0016584::nucleosome positioning very confident hh_3mwy_W_1::3-190 very confident psy16278 88 O14981::TATA-binding protein-associated factor 172 ::Regulates transcription in association with TATA binding protein (TBP). Removes TBP from the TATA box in an ATP-dependent manner.::Homo sapiens (taxid: 9606) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.78::5-87 PF00271::Helicase_C 99.44::21-86 GO:0016887::ATPase activity confident rp_3mwy_W_1::21-84 very confident psy1089 404 Q60848::Lymphocyte-specific helicase ::Plays an essential role in normal development and survival. Involved in regulation of the expansion or survival of lymphoid cells. Required for de novo or maintenance DNA methylation. May control silencing of the imprinted CDKN1C gene through DNA methylation. May play a role in formation and organization of heterochromatin, implying a functional role in the regulation of transcription and mitosis.::Mus musculus (taxid: 10090) portable COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 100.00::1-402 PF00271::Helicase_C 99.61::259-338 GO:0017053::transcriptional repressor complex confident hh_1z3i_X_1::1-54,94-94,177-365,376-403 very confident psy2046 138 O74842::ATP-dependent helicase fft2 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.91::19-138 PF00271::Helicase_C 99.88::57-136 GO:0031011::Ino80 complex confident hh_3mwy_W_1::19-138 very confident psy15261 292 O14981::TATA-binding protein-associated factor 172 ::Regulates transcription in association with TATA binding protein (TBP). Removes TBP from the TATA box in an ATP-dependent manner.::Homo sapiens (taxid: 9606) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.98::2-236 PF00271::Helicase_C 99.63::104-180 GO:0042393::histone binding confident hh_3mwy_W_1::2-54,78-101,105-240 very confident psy13224 160 Q759G7::Helicase SWR1 ::Catalytic component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.87::35-160 PF00271::Helicase_C 99.78::72-151 GO:0045111::intermediate filament cytoskeleton confident hh_3mwy_W_1::36-160 very confident psy12190 105 Q9VMX6::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 ::ATP-dependent annealing helicase that catalyzes the rewinding of the stably unwound DNA.::Drosophila melanogaster (taxid: 7227) confident COG0553::HepA Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair] 99.93::1-103 PF00271::Helicase_C 99.77::2-71 GO:0045910::negative regulation of DNA recombination confident hh_1z3i_X_1::1-105 very confident psy224 547 Q5E947::Peroxiredoxin-1 ::Involved in redox regulation of the cell. Reduces peroxides with reducing equivalents provided through the thioredoxin system but not from glutaredoxin. May play an important role in eliminating peroxides generated during metabolism. Might participate in the signaling cascades of growth factors and tumor necrosis factor-alpha by regulating the intracellular concentrations of H(2)O(2) (By similarity). Reduces an intramolecular disulfide bond in GDPD5 that gates the ability to GDPD5 to drive postmitotic motor neuron differentiation.::Bos taurus (taxid: 9913) confident COG0554::GlpK Glycerol kinase [Energy production and conversion] 100.00::3-356 PF00370::FGGY_N 99.97::5-178 GO:0005829::cytosol confident hh_3qpm_A_1::356-546 very confident psy1586 431 A4FNR2::Glycerol kinase ::Key enzyme in the regulation of glycerol uptake and metabolism.::Saccharopolyspora erythraea (strain NRRL 23338) (taxid: 405948) very confident COG0554::GlpK Glycerol kinase [Energy production and conversion] 100.00::1-430 PF00370::FGGY_N 100.00::1-245 GO:0042393::histone binding very confident hh_3h3n_X_1::1-9,11-55,59-111,113-168,174-288,291-430 very confident psy9709 500 A4FNR2::Glycerol kinase ::Key enzyme in the regulation of glycerol uptake and metabolism.::Saccharopolyspora erythraea (strain NRRL 23338) (taxid: 405948) confident COG0554::GlpK Glycerol kinase [Energy production and conversion] 100.00::152-500 PF00370::FGGY_N 100.00::154-385 GO:0042393::histone binding confident hh_2dpn_A_1::153-173,175-216,220-271,273-274,277-330,333-423,425-500 very confident psy9351 297 Q64516::Glycerol kinase ::Key enzyme in the regulation of glycerol uptake and metabolism.::Mus musculus (taxid: 10090) confident COG0554::GlpK Glycerol kinase [Energy production and conversion] 100.00::9-296 PF00370::FGGY_N 100.00::11-271 GO:0042393::histone binding confident hh_3h3n_X_1::9-29,31-68,73-73,75-75,79-135,139-194,200-295 very confident psy1574 124 B2V358::Glycerol kinase ::Key enzyme in the regulation of glycerol uptake and metabolism.::Clostridium botulinum (strain Alaska E43 / Type E3) (taxid: 508767) portable COG0554::GlpK Glycerol kinase [Energy production and conversion] 99.96::2-123 PF00370::FGGY_N 99.96::2-124 GO:0043231::intracellular membrane-bounded organelle confident hh_2d4w_A_1::2-34,38-91,95-124 very confident psy1582 129 Q9X1E4::Glycerol kinase 2 ::Key enzyme in the regulation of glycerol uptake and metabolism.::Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) confident COG0554::GlpK Glycerol kinase [Energy production and conversion] 99.95::12-128 PF00370::FGGY_N 99.94::14-128 GO:0043231::intracellular membrane-bounded organelle confident hh_3h3n_X_1::11-32,34-76,80-128 very confident psy9355 204 A4FNR2::Glycerol kinase ::Key enzyme in the regulation of glycerol uptake and metabolism.::Saccharopolyspora erythraea (strain NRRL 23338) (taxid: 405948) confident COG0554::GlpK Glycerol kinase [Energy production and conversion] 100.00::4-192 PF02782::FGGY_C 100.00::6-168 GO:0042393::histone binding confident hh_2dpn_A_1::6-21,23-44,46-170,172-176,178-193,195-201 very confident psy4150 395 A2Q8R2::ATP-dependent DNA helicase mph1 ::ATP-dependent DNA helicase involved in error-free DNA damage bypass through homologous recombination.::Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) portable COG0556::UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] 100.00::90-368 PF00271::Helicase_C 99.76::139-220 GO:0031981::nuclear lumen confident hh_1wp9_A_1::95-113,118-144,147-241 very confident psy4856 654 P37202::Exosome complex exonuclease dis3 ::Catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and cryptic unstable transcripts (CUTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and in RNA surveillance pathways, preventing translation of aberrant mRNAs. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. DIS3 has both 3'-5' exonuclease and endonuclease activities. The exonuclease activity of DIS3 is down-regulated upon association with Exo-9 possibly involving a conformational change in the catalytic domain and threading of the RNA substrate through the complex central channel. Structured substrates can be degraded if they have a 3' single-stranded extension sufficiently long (such as 35 nt poly(A)) to span the proposed complex inner RNA-binding path and to reach the exonuclease site provided by dis3 (By similarity). Implicated in mitotic control. Essential for cell division and spore germination. May be involved in regulating protein dephosphorylation during mitosis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0557::VacB Exoribonuclease R [Transcription] 100.00::135-652 PF00773::RNB 99.97::349-511 GO:0005652::nuclear lamina confident hh_2vnu_D_1::112-530,578-606,608-611,613-624,626-632,634-651 very confident psy4862 81 P37202::Exosome complex exonuclease dis3 ::Catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and cryptic unstable transcripts (CUTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and in RNA surveillance pathways, preventing translation of aberrant mRNAs. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. DIS3 has both 3'-5' exonuclease and endonuclease activities. The exonuclease activity of DIS3 is down-regulated upon association with Exo-9 possibly involving a conformational change in the catalytic domain and threading of the RNA substrate through the complex central channel. Structured substrates can be degraded if they have a 3' single-stranded extension sufficiently long (such as 35 nt poly(A)) to span the proposed complex inner RNA-binding path and to reach the exonuclease site provided by dis3 (By similarity). Implicated in mitotic control. Essential for cell division and spore germination. May be involved in regulating protein dephosphorylation during mitosis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0557::VacB Exoribonuclease R [Transcription] 99.95::5-81 PF00773::RNB 99.94::7-81 GO:0005829::cytosol confident rp_2vnu_D_1::22-81 very confident psy4846 279 P37202::Exosome complex exonuclease dis3 ::Catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and cryptic unstable transcripts (CUTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and in RNA surveillance pathways, preventing translation of aberrant mRNAs. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. DIS3 has both 3'-5' exonuclease and endonuclease activities. The exonuclease activity of DIS3 is down-regulated upon association with Exo-9 possibly involving a conformational change in the catalytic domain and threading of the RNA substrate through the complex central channel. Structured substrates can be degraded if they have a 3' single-stranded extension sufficiently long (such as 35 nt poly(A)) to span the proposed complex inner RNA-binding path and to reach the exonuclease site provided by dis3 (By similarity). Implicated in mitotic control. Essential for cell division and spore germination. May be involved in regulating protein dephosphorylation during mitosis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0557::VacB Exoribonuclease R [Transcription] 100.00::3-249 PF00773::RNB 99.83::3-95 GO:0006401::RNA catabolic process confident hh_2vnu_D_1::2-150,175-198,200-232,235-248 very confident psy4851 62 Q9CSH3::Exosome complex exonuclease RRP44 ::Putative catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. DIS3 has both 3'-5' exonuclease and endonuclease activities.::Mus musculus (taxid: 10090) confident COG0557::VacB Exoribonuclease R [Transcription] 98.99::1-60 no hit no match GO:0000176::nuclear exosome (RNase complex) confident hh_2wp8_J_1::1-11,13-62 very confident psy16739 129 O14735::CDP-diacylglycerol--inositol 3-phosphatidyltransferase ::Catalyzes the biosynthesis of phosphatidylinositol (PtdIns) as well as PtdIns:inositol exchange reaction. May thus act to reduce an excessive cellular PtdIns content. The exchange activity is due to the reverse reaction of PtdIns synthase and is dependent on CMP, which is tightly bound to the enzyme.::Homo sapiens (taxid: 9606) confident COG0558::PgsA Phosphatidylglycerophosphate synthase [Lipid metabolism] 99.87::20-127 PF01066::CDP-OH_P_transf 99.83::25-97 GO:0005794::Golgi apparatus confident no hit no match psy6922 197 Q8MZC4::Probable cardiolipin synthase ::Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.::Drosophila melanogaster (taxid: 7227) confident COG0558::PgsA Phosphatidylglycerophosphate synthase [Lipid metabolism] 99.95::33-182 PF01066::CDP-OH_P_transf 99.79::35-109 GO:0008654::phospholipid biosynthetic process confident rp_1vt4_I_1::2-46,50-82,84-85,92-116,120-157,160-173 portable psy16481 175 O15305::Phosphomannomutase 2 ::Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.::Homo sapiens (taxid: 9606) confident COG0561::Cof Predicted hydrolases of the HAD superfamily [General function prediction only] 99.92::5-174 PF08282::Hydrolase_3 99.92::9-174 GO:0005829::cytosol confident hh_2amy_A_1::4-31,33-60,62-174 very confident psy9245 141 Q9U915::Adenylate kinase 2, mitochondrial ::Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in energy metabolism and nucleotide synthesis that is essential for maintenance and cell growth.::Drosophila melanogaster (taxid: 7227) confident COG0563::Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] 99.39::9-127 PF00406::ADK 99.26::6-106 GO:0005811::lipid particle confident hh_1ak2_A_1::31-131 very confident psy9244 119 Q28F55::Adenylate kinase 2, mitochondrial ::Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in energy metabolism and nucleotide synthesis that is essential for maintenance and cell growth. Plays a key role in hematopoiesis.::Xenopus tropicalis (taxid: 8364) confident COG0563::Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] 99.96::18-118 PF00406::ADK 99.97::22-117 GO:0005829::cytosol confident rp_1ak2_A_1::2-119 very confident psy6801 228 Q9WTP7::GTP:AMP phosphotransferase, mitochondrial ::::Mus musculus (taxid: 10090) very confident COG0563::Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] 99.97::8-212 PF00406::ADK 99.97::12-191 GO:0005829::cytosol very confident hh_1zd8_A_1::1-104,106-199,201-221 very confident psy11031 520 B1MGB3::Adenylate kinase ::Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth.::Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) (taxid: 561007) portable COG0563::Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] 99.96::226-403 PF00406::ADK 99.97::230-381 GO:0009260::ribonucleotide biosynthetic process confident hh_2bwj_A_1::224-249,251-262,266-303,305-406 very confident psy11030 153 C1D6J0::Adenylate kinase ::Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth.::Laribacter hongkongensis (strain HLHK9) (taxid: 557598) confident COG0563::Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] 99.89::1-108 PF00406::ADK 99.94::1-90 GO:0031090::organelle membrane confident hh_2bwj_A_1::1-109 very confident psy11897 363 Q8SVC2::Adenylate kinase-like protein ::Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) portable COG0563::Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] 99.94::62-361 PF00406::ADK 99.94::66-345 GO:0043229::intracellular organelle confident rp_1snz_A_1::125-128,130-215,217-248 very confident psy6625 76 P59215::Guanine nucleotide-binding protein G(o) subunit alpha ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(o) protein function is not clear. Stimulated by RGS14.::Rattus norvegicus (taxid: 10116) confident COG0563::Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] 97.18::35-56 PF00503::G-alpha 99.31::9-60 GO:0006184::GTP catabolic process confident hh_1zcb_A_1::1-59 very confident psy8191 257 O67638::Uncharacterized RNA pseudouridine synthase aq_1758 ::::Aquifex aeolicus (strain VF5) (taxid: 224324) confident COG0564::RluA Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis] 100.00::3-243 PF00849::PseudoU_synth_2 100.00::37-193 GO:0034470::ncRNA processing confident hh_1v9f_A_1::3-16,19-147,150-165,170-253 very confident psy6779 144 Q5ND52::RNA methyltransferase-like protein 1 ::Probable RNA methyltransferase.::Mus musculus (taxid: 10090) portable COG0566::SpoU rRNA methylases [Translation, ribosomal structure and biogenesis] 100.00::10-144 PF00588::SpoU_methylase 99.61::96-144 GO:0044464::cell part confident hh_1ipa_A_1::4-130,132-144 very confident psy4210 71 Q148N0::2-oxoglutarate dehydrogenase, mitochondrial ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Bos taurus (taxid: 9913) portable COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 99.96::1-68 PF00676::E1_dh 98.83::4-65 GO:0005739::mitochondrion confident hh_2yic_A_1::1-66 very confident psy9579 887 P20707::2-oxoglutarate dehydrogenase E1 component ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Azotobacter vinelandii (taxid: 354) very confident COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 100.00::9-887 PF00676::E1_dh 100.00::149-470 GO:0005829::cytosol confident hh_2xt6_A_1::25-58,60-61,63-87,89-134,137-319,322-482,489-533,535-580,589-886 very confident psy11220 127 Q9ULD0::2-oxoglutarate dehydrogenase-like, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 100.00::1-103 PF00676::E1_dh 97.25::3-90 GO:0005875::microtubule associated complex very confident hh_2xt6_A_1::1-54,56-91 very confident psy8742 968 Q02218::2-oxoglutarate dehydrogenase, mitochondrial ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Homo sapiens (taxid: 9606) very confident COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 100.00::44-968 PF00676::E1_dh 100.00::298-623 GO:0006104::succinyl-CoA metabolic process very confident hh_2xt6_A_1::153-185,188-194,203-207,218-231,234-236,239-284,286-401,403-617,619-632,640-663,667-736,738-844,850-850,867-919,921-962,964-968 very confident psy4206 97 O74378::2-oxoglutarate dehydrogenase, mitochondrial ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 100.00::1-94 PF00676::E1_dh 97.50::3-91 GO:0043234::protein complex confident hh_2xt6_A_1::1-55,57-91 very confident psy4209 856 P45303::2-oxoglutarate dehydrogenase E1 component ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) portable COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 100.00::1-583 PF00676::E1_dh 100.00::11-156 GO:0043234::protein complex confident hh_2xt6_A_1::1-151,153-167,175-197,199-375,391-441,443-486,488-576,578-583 very confident psy11221 202 O61199::2-oxoglutarate dehydrogenase, mitochondrial ::The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of three enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3).::Caenorhabditis elegans (taxid: 6239) confident COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 100.00::6-175 PF00676::E1_dh 98.11::27-175 GO:0044710::single-organism metabolic process confident hh_2xt6_A_1::9-20,24-83,85-116,129-174 very confident psy8747 214 no hit no match COG0567::SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion] 100.00::2-214 PF02779::Transket_pyr 97.43::23-64 GO:0005739::mitochondrion confident rp_2jgd_A_1::31-77,79-86,89-121,123-214 very confident psy15215 1432 Q92BQ6::RNA polymerase sigma factor RpoD ::Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This is the primary sigma factor of this bacterium.::Listeria innocua serovar 6a (strain CLIP 11262) (taxid: 272626) confident COG0568::RpoD DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription] 100.00::1074-1428 PF04546::Sigma70_ner 99.97::171-374 GO:0050896::response to stimulus confident hh_3ugo_A_2::127-194,196-203,232-235,241-241,340-346,356-356,359-359,380-388,390-397,401-533 very confident psy8620 695 Q8QFV0::Potassium channel subfamily T member 1 ::Generates outwardly rectifying currents that are suppressed by elevation of intracellular calcium.::Gallus gallus (taxid: 9031) confident COG0569::TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] 99.35::117-397 PF03493::BK_channel_a 99.77::240-375 GO:0016021::integral to membrane confident hh_3naf_A_1::76-109,112-124,126-166,169-283,285-285,287-300,335-346,352-389,391-397,399-529,531-576,593-687 very confident psy6103 125 Q03720::Calcium-activated potassium channel slowpoke ::Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Kinetics are determined by alternative splicing, phosphorylation status and its combination interaction with Slob and 14-3-3-zeta. While the interaction with Slob1 alone increases its activity, its interaction with both Slob1 and 14-3-3-zeta decreases its activity.::Drosophila melanogaster (taxid: 7227) very confident COG0569::TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] 95.68::17-115 PF03493::BK_channel_a 99.63::80-123 GO:0043025::neuronal cell body very confident hh_3naf_A_1::10-122 very confident psy14233 122 Q22307::Probable ATP-dependent RNA helicase A ::Unwinds double-stranded DNA and RNA in a 3' to 5' direction. Generates multiple secondary structures that influence RNA-binding proteins (By similarity). Transcriptional regulator that controls germline mitosis and development via histone modification.::Caenorhabditis elegans (taxid: 6239) confident COG0571::Rnc dsRNA-specific ribonuclease [Transcription] 99.67::4-74 PF00035::dsrm 99.74::7-72 GO:0000785::chromatin confident hh_1whq_A_1::2-87 very confident psy5350 377 Q7SXR1::RISC-loading complex subunit tarbp2 ::Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of dicer1, eif2c2/ago2 and tarbp2. Within the RLC/miRLC, dicer1 and tarbp2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto eif2c2/ago2. eif2c2/ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from dicer1 and tarbp2. May also play a role in the production of short interfering RNAs (siRNAs) from double-stranded RNA (dsRNA) by dicer1.::Danio rerio (taxid: 7955) confident COG0571::Rnc dsRNA-specific ribonuclease [Transcription] 99.96::3-150 PF00035::dsrm 99.56::78-146 GO:0070918::production of small RNA involved in gene silencing by RNA confident hh_1di2_A_1::168-234 very confident psy15484 1233 B3DLA6::Endoribonuclease Dicer ::Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of dicer1, eif2c2/ago2 and tarbp2. Within the RLC/miRLC, dicer1 and tarbp2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto eif2c2/ago2. eif2c2/ago2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from dicer1 and tarbp2. Also cleaves double-stranded RNA to produce short interfering RNAs (siRNAs) which target the selective destruction of complementary RNAs.::Xenopus tropicalis (taxid: 8364) portable COG0571::Rnc dsRNA-specific ribonuclease [Transcription] 100.00::978-1228 PF03368::Dicer_dimer 99.95::4-97 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_3c4b_A_1::973-1180,1182-1227 very confident psy3362 550 Q9NRR4::Ribonuclease 3 ::Ribonuclease III double-stranded (ds) RNA-specific endoribonuclease that is involved in the initial step of microRNA (miRNA) biogenesis. Component of the microprocessor complex that is required to process primary miRNA transcripts (pri-miRNAs) to release precursor miRNA (pre-miRNA) in the nucleus. Within the microprocessor complex, DROSHA cleaves the 3' and 5' strands of a stem-loop in pri-miRNAs (processing center 11 bp from the dsRNA-ssRNA junction) to release hairpin-shaped pre-miRNAs that are subsequently cut by the cytoplasmic DICER to generate mature miRNAs. Involved also in pre-rRNA processing. Cleaves double-strand RNA and does not cleave single-strand RNA. Involved in the formation of GW bodies.::Homo sapiens (taxid: 9606) confident COG0571::Rnc dsRNA-specific ribonuclease [Transcription] 100.00::227-455 PF14622::Ribonucleas_3_3 99.95::242-368 GO:0010586::miRNA metabolic process confident hh_2a11_A_1::229-240,242-391,398-408,410-455 very confident psy14776 1022 Q5HZJ0::Ribonuclease 3 ::Ribonuclease III double-stranded (ds) RNA-specific endoribonuclease that is involved in the initial step of microRNA (miRNA) biogenesis. Component of the microprocessor complex that is required to process primary miRNA transcripts (pri-miRNAs) to release precursor miRNA (pre-miRNA) in the nucleus. Within the microprocessor complex, DROSHA cleaves the 3' and 5' strands of a stem-loop in pri-miRNAs (processing center 11 bp from the dsRNA-ssRNA junction) to release hairpin-shaped pre-miRNAs that are subsequently cut by the cytoplasmic DICER to generate mature miRNAs. Involved also in pre-rRNA processing. Cleaves double-strand RNA and does not cleave single-strand RNA. Involved in the formation of GW bodies.::Mus musculus (taxid: 10090) confident COG0571::Rnc dsRNA-specific ribonuclease [Transcription] 99.97::731-928 PF14622::Ribonucleas_3_3 99.94::821-928 GO:0031054::pre-miRNA processing confident hh_3rv0_A_1::721-766,775-776,786-786,816-951 very confident psy3979 286 Q6TUI4::Endoribonuclease Dicer ::Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, EIF2C2/AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto EIF2C2/AGO2. EIF2C2/AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. Also cleaves double-stranded RNA to produce short interfering RNAs (siRNAs) which target the selective destruction of complementary RNAs.::Bos taurus (taxid: 9913) portable COG0571::Rnc dsRNA-specific ribonuclease [Transcription] 99.97::111-211 PF14622::Ribonucleas_3_3 99.92::126-208 GO:0035194::posttranscriptional gene silencing by RNA confident hh_3c4b_A_1::111-235,250-257,262-262,265-286 very confident psy9618 542 Q9NWZ5::Uridine-cytidine kinase-like 1 ::May contribute to UTP accumulation needed for blast transformation and proliferation.::Homo sapiens (taxid: 9606) confident COG0572::Udk Uridine kinase [Nucleotide transport and metabolism] 100.00::41-246 PF00485::PRK 99.98::45-232 GO:0005829::cytosol confident rp_2jeo_A_1::35-187,189-246 very confident psy11490 147 P46577::GPN-loop GTPase 1 homolog ::::Caenorhabditis elegans (taxid: 6239) confident COG0572::Udk Uridine kinase [Nucleotide transport and metabolism] 99.81::24-124 PF00485::PRK 99.63::28-124 GO:0043229::intracellular organelle confident hh_3asz_A_1::22-52,56-75,77-112 confident psy16518 283 P56079::Phosphatidate cytidylyltransferase, photoreceptor-specific ::Required for the regeneration of the signaling molecule phosphatidylinositol 4,5-bisphosphate (PtdInsP2) from phosphatidic acid and maintenance of its steady supply during signaling thus plays an essential role during phospholipase C-mediated transduction.::Drosophila melanogaster (taxid: 7227) confident COG0575::CdsA CDP-diglyceride synthetase [Lipid metabolism] 99.94::1-126 PF01148::CTP_transf_1 99.90::2-129 GO:0005635::nuclear envelope confident no hit no match psy2067 225 Q3SZC1::GrpE protein homolog 1, mitochondrial ::Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of mitochondrial HSP70 to substrate proteins.::Bos taurus (taxid: 9913) confident COG0576::GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones] 100.00::79-219 PF01025::GrpE 99.96::71-219 GO:0005759::mitochondrial matrix confident hh_4ani_A_1::72-146,153-177,180-186,191-219 very confident psy2068 97 Q6CRQ1::GrpE protein homolog, mitochondrial ::Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of SSC1 to substrate proteins.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) confident COG0576::GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.97::19-97 PF01025::GrpE 99.96::18-96 GO:0005759::mitochondrial matrix confident rp_4ani_A_1::28-96 very confident psy15526 71 Q6CRQ1::GrpE protein homolog, mitochondrial ::Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Seems to control the nucleotide-dependent binding of SSC1 to substrate proteins.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) confident COG0576::GrpE Molecular chaperone GrpE (heat shock protein) [Posttranslational modification, protein turnover, chaperones] 99.97::1-71 PF01025::GrpE 99.96::1-70 GO:0005759::mitochondrial matrix confident hh_4ani_A_1::1-70 very confident psy8270 737 Q9SS48::Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial ::Required for glycerol catabolism and involved in NADH/NAD(+) homeostasis. Essential for postgerminative growth and seedling establishment.::Arabidopsis thaliana (taxid: 3702) portable COG0578::GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] 100.00::393-599 PF01266::DAO 99.91::415-575 GO:0030426::growth cone confident rp_3da1_A_1::393-480,482-597 very confident psy10290 128 Q96CU9::FAD-dependent oxidoreductase domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG0579::Predicted dehydrogenase [General function prediction only] 99.39::12-125 PF01266::DAO 99.53::7-125 GO:0005739::mitochondrion confident hh_1y56_B_1::7-54,61-61,64-125,127-128 very confident psy3952 252 Q9N4Z0::L-2-hydroxyglutarate dehydrogenase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG0579::Predicted dehydrogenase [General function prediction only] 99.92::1-243 PF01266::DAO 99.91::1-239 GO:0005811::lipid particle confident hh_3dme_A_1::2-79,82-95,98-121,125-128,130-133,155-159,169-199,201-241 very confident psy7710 473 Q9N4Z0::L-2-hydroxyglutarate dehydrogenase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG0579::Predicted dehydrogenase [General function prediction only] 100.00::56-329 PF01266::DAO 100.00::59-445 GO:0016021::integral to membrane confident hh_3dme_A_1::56-79,82-289,292-304,307-329,333-337,339-342,373-425,427-429,434-445 very confident psy6903 249 Q10M80::Aquaporin SIP2-1 ::Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0580::GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] 100.00::29-243 PF00230::MIP 100.00::29-238 GO:0005737::cytoplasm confident hh_3d9s_A_1::29-71,73-127,132-132,136-212,216-244 confident psy16062 396 Q87MQ5::Aquaporin Z ::Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity.::Vibrio parahaemolyticus (taxid: 670) portable COG0580::GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] 100.00::1-213 PF00230::MIP 100.00::2-208 GO:0005773::vacuole confident hh_3gd8_A_1::2-94,104-214 very confident psy8647 274 Q7PWV1::Aquaporin AQPAn.G ::Forms a water-specific channel.::Anopheles gambiae (taxid: 7165) very confident COG0580::GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] 100.00::45-261 PF00230::MIP 100.00::40-256 GO:0015105::arsenite transmembrane transporter activity confident hh_3gd8_A_1::44-262 very confident psy1510 216 P55087::Aquaporin-4 ::Forms a water-specific channel. Osmoreceptor which regulates body water balance and mediates water flow within the central nervous system.::Homo sapiens (taxid: 9606) confident COG0580::GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] 100.00::14-197 PF00230::MIP 100.00::14-192 GO:0015250::water channel activity confident hh_3gd8_A_1::14-198 very confident psy1500 80 P55087::Aquaporin-4 ::Forms a water-specific channel. Osmoreceptor which regulates body water balance and mediates water flow within the central nervous system.::Homo sapiens (taxid: 9606) portable COG0580::GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] 98.88::19-79 PF00230::MIP 98.89::6-79 GO:0022857::transmembrane transporter activity confident hh_3gd8_A_1::6-79 very confident psy10806 178 Q87MQ5::Aquaporin Z ::Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity.::Vibrio parahaemolyticus (taxid: 670) confident COG0580::GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] 100.00::1-154 PF00230::MIP 100.00::1-149 GO:0070887::cellular response to chemical stimulus confident hh_3gd8_A_1::1-34,44-155 very confident psy10345 221 Q75GA5::Probable aquaporin TIP4-1 ::Aquaporins facilitate the transport of water and small neutral solutes across cell membranes. May be involved in transport from the vacuolar compartment to the cytoplasm.::Oryza sativa subsp. japonica (taxid: 39947) confident COG0580::GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism] 100.00::20-213 PF00230::MIP 100.00::17-208 GO:0071705::nitrogen compound transport confident hh_3d9s_A_1::14-49,51-117,119-216 very confident psy3760 306 P06614::HTH-type transcriptional regulator CysB ::This protein is a positive regulator of gene expression for the cysteine regulon, a system of 10 or more loci involved in the biosynthesis of L-cysteine from inorganic sulfate. The inducer for cysB is N-acetylserine. CysB inhibits its own transcription.::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) confident COG0583::LysR Transcriptional regulator [Transcription] 100.00::1-297 PF03466::LysR_substrate 100.00::89-296 GO:0045883::positive regulation of sulfur utilization confident hh_1al3_A_1::1-302 very confident psy9396 1149 P57332::DNA polymerase III subunit alpha ::DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The alpha chain is the DNA polymerase.::Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (taxid: 107806) confident COG0587::DnaE DNA polymerase III, alpha subunit [DNA replication, recombination, and repair] 100.00::3-1146 PF07733::DNA_pol3_alpha 100.00::292-729 GO:0008408::3'-5' exonuclease activity confident hh_2hnh_A_1::1-122,125-286,288-470,473-580,583-800,802-821,827-907 very confident psy7395 365 Q39V40::2,3-bisphosphoglycerate-dependent phosphoglycerate mutase ::Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.::Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) (taxid: 269799) confident COG0588::GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] 100.00::5-231 PF00300::His_Phos_1 99.97::7-196 GO:0005829::cytosol confident hh_4emb_A_1::2-136,139-144,147-231,233-253 very confident psy11843 325 Q9DBJ1::Phosphoglycerate mutase 1 ::Interconversion of 3- and 2-phosphoglycerate with 2,3-bisphosphoglycerate as the primer of the reaction. Can also catalyze the reaction of EC 5.4.2.4 (synthase) and EC 3.1.3.13 (phosphatase), but with a reduced activity.::Mus musculus (taxid: 10090) confident COG0588::GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] 100.00::130-325 PF00300::His_Phos_1 99.97::132-324 GO:0006110::regulation of glycolysis confident hh_1e58_A_1::129-140,147-152,158-265,268-275,277-325 very confident psy11845 215 Q32IH0::2,3-bisphosphoglycerate-dependent phosphoglycerate mutase ::Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.::Shigella dysenteriae serotype 1 (strain Sd197) (taxid: 300267) confident COG0588::GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] 100.00::2-215 PF00300::His_Phos_1 99.93::2-187 GO:0030018::Z disc confident hh_1yfk_A_1::2-101,123-137,139-215 very confident psy12135 212 Q39V40::2,3-bisphosphoglycerate-dependent phosphoglycerate mutase ::Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate.::Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) (taxid: 269799) confident COG0588::GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] 99.93::90-212 PF00300::His_Phos_1 99.40::43-199 GO:0071944::cell periphery confident hh_4emb_A_1::41-82,87-139,142-147,150-209 very confident psy11844 241 Q9DBJ1::Phosphoglycerate mutase 1 ::Interconversion of 3- and 2-phosphoglycerate with 2,3-bisphosphoglycerate as the primer of the reaction. Can also catalyze the reaction of EC 5.4.2.4 (synthase) and EC 3.1.3.13 (phosphatase), but with a reduced activity.::Mus musculus (taxid: 10090) confident COG0588::GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] 99.58::133-219 PF10242::L_HGMIC_fpl 99.93::25-185 GO:0005829::cytosol confident rp_1yfk_A_1::130-237 very confident psy9259 489 Q6P5C5::Single-strand selective monofunctional uracil DNA glycosylase ::Responsible for recognizing base lesions in the genome and initiating base excision DNA repair. Acts as a monofunctional DNA glycosylase specific for uracil (U) residues in DNA and has a preference for single-stranded DNA substrates. The activity is greater against mismatches (U/G) than against matches (U/A). Excised uracil (U), 5-formyluracil (fU) and uracil derivatives bearing an oxidized group at C5 [5-hydroxyuracil (hoU) and 5-hydroxymethyluracil (hmU)] in ssDNA and dsDNA but not analogous cytosine derivatives (5-hydroxycytosine and 5-formylcytosine) and other oxidized damage. The activity is damage specificity and salt concentration-dependent. The general order of the preference for ssDNA and dsDNA is the following: ssDNA > dsDNA (G pair) = dsDNA (A pair) at the low salt concentration. At the high concentration dsDNA (G pair) > dsDNA (A pair) > ssDNA.::Mus musculus (taxid: 10090) portable COG0590::CumB Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis] 99.97::326-471 PF00383::dCMP_cyt_deam_1 99.80::324-427 GO:0019104::DNA N-glycosylase activity confident hh_1oe4_A_1::61-79,82-187,189-224,226-270,272-310 very confident psy8232 249 Q9XT77::Sodium-dependent multivitamin transporter ::Transports pantothenate, biotin and lipoate in the presence of sodium.::Oryctolagus cuniculus (taxid: 9986) portable COG0591::PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] 100.00::2-244 PF00474::SSF 100.00::2-245 GO:0015075::ion transmembrane transporter activity confident hh_2xq2_A_1::2-170,172-246 very confident psy15005 336 Q1EHB4::Sodium-coupled monocarboxylate transporter 2 ::Acts as an electroneutral and low-affinity sodium (Na(+))-dependent sodium-coupled solute transporter. Catalyzes the transport across the plasma membrane of many monocarboxylates such as lactate, pyruvate, nicotinate, propionate, butyrate and beta-D-hydroxybutyrate. May be responsible for the first step of reabsorption of monocarboxylates from the lumen of the proximal tubule of the kidney and the small intestine. May play also a role in monocarboxylates transport in the retina (By similarity). Mediates electroneutral uptake of lactate, with a stoichiometry of 2 Na(+) for each lactate.::Homo sapiens (taxid: 9606) portable COG0591::PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] 99.95::3-237 PF00474::SSF 99.97::3-231 GO:0015291::secondary active transmembrane transporter activity confident hh_3dh4_A_2::214-240,248-336 confident psy14002 454 O02228::High-affinity choline transporter 1 ::Imports choline from the extracellular space to the neuron with high affinity. Choline uptake is the rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent.::Caenorhabditis elegans (taxid: 6239) confident COG0591::PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] 100.00::3-440 PF00474::SSF 100.00::36-437 GO:0043025::neuronal cell body confident hh_2xq2_A_1::2-145,151-172,175-192,195-199,201-203,207-326,328-442 very confident psy7238 123 Q9VE46::High-affinity choline transporter 1 ::Imports choline from the extracellular space to the neuron with high affinity. Rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent.::Drosophila melanogaster (taxid: 7227) confident COG0591::PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] 99.23::1-76 PF00474::SSF 99.13::1-69 GO:0043025::neuronal cell body confident hh_2xq2_A_1::1-55,57-77,80-80,83-85,88-92,102-123 confident psy15007 68 Q8BYF6::Sodium-coupled monocarboxylate transporter 1 ::Acts as an electrogenic sodium (Na(+)) and chloride (Cl-)-dependent sodium-coupled solute transporter, including transport of monocarboxylates (short-chain fatty acids including L-lactate, D-lactate, pyruvate, acetate, propionate, valerate and butyrate), lactate, mocarboxylate drugs (nicotinate, benzoate, salicylate and 5-aminosalicylate) and ketone bodies (beta-D-hydroxybutyrate, acetoacetate and alpha-ketoisocaproate), with a Na(+):substrate stoichiometry of between 4:1 and 2:1. Catalyzes passive carrier mediated diffusion of iodide. Mediates iodide transport from the thyrocyte into the colloid lumen through the apical membrane. May be responsible for the absorption of D-lactate and monocarboxylate drugs from the intestinal tract. May play a critical role in the entry of L-lactate and ketone bodies into neurons by a process driven by an electrochemical Na(+) gradient and hence contribute to the maintenance of the energy status and function of neurons.::Mus musculus (taxid: 10090) portable COG0591::PutP Na+/proline symporter [Amino acid transport and metabolism / General function prediction only] 98.94::14-68 no hit no match GO:0015291::secondary active transmembrane transporter activity confident hh_2xq2_A_1::12-68 confident psy13355 314 Q9KVX5::DNA polymerase III subunit beta ::DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP-independent) along duplex DNA.::Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) confident COG0592::DnaN DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] 100.00::1-312 PF00712::DNA_pol3_beta 99.96::1-122 GO:0005829::cytosol confident hh_3t0p_A_1::1-3,6-64,66-88,90-126,128-192,194-300,302-313 very confident psy5572 62 P17917::Proliferating cell nuclear antigen ::This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand.::Drosophila melanogaster (taxid: 7227) confident COG0592::DnaN DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] 98.12::3-59 PF02747::PCNA_C 99.90::2-56 GO:0005875::microtubule associated complex confident hh_2zvv_A_1::2-58 very confident psy2363 156 P12004::Proliferating cell nuclear antigen ::This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. Induces a robust stimulatory effect on the 3'-5' exonuclease and 3'-phosphodiesterase, but not apurinic-apyrimidinic (AP) endonuclease, APEX2 activities. Has to be loaded onto DNA in order to be able to stimulate APEX2.::Homo sapiens (taxid: 9606) confident COG0592::DnaN DNA polymerase sliding clamp subunit (PCNA homolog) [DNA replication, recombination, and repair] 98.24::95-153 PF02747::PCNA_C 100.00::1-150 GO:0006298::mismatch repair confident hh_2zvv_A_1::1-56,91-152 very confident psy5044 219 Q6DFS4::Protein NDRG3 ::::Xenopus tropicalis (taxid: 8364) portable COG0596::MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] 99.38::148-218 PF03096::Ndr 100.00::28-218 GO:0005737::cytoplasm confident hh_2qmq_A_1::29-81,149-218 very confident psy2961 202 Q9DCS3::Trans-2-enoyl-CoA reductase, mitochondrial ::Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA with chain length from C6 to C16 in an NADPH-dependent manner with preference to medium chain length substrate. May have a role in the mitochondrial synthesis of fatty acids.::Mus musculus (taxid: 10090) confident COG0604::Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] 99.97::2-200 PF00107::ADH_zinc_N 99.83::22-138 GO:0006631::fatty acid metabolic process confident hh_1zsy_A_1::2-144,146-186,189-200 very confident psy3430 121 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) confident COG0604::Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] 99.95::4-119 PF08240::ADH_N 98.64::17-60 GO:0005829::cytosol confident hh_2vz8_A_1::3-121 very confident psy1119 1392 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG0604::Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] 100.00::425-754 PF08659::KR 100.00::782-963 GO:0044444::cytoplasmic part confident hh_3krt_A_1::434-445,454-608,613-697,702-702,707-708,710-758 very confident psy16344 218 P09671::Superoxide dismutase [Mn], mitochondrial ::Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.::Mus musculus (taxid: 10090) very confident COG0605::SodA Superoxide dismutase [Inorganic ion transport and metabolism] 100.00::19-218 PF02777::Sod_Fe_C 100.00::106-212 GO:0005507::copper ion binding very confident hh_3dc5_A_1::21-165,168-168,170-216 very confident psy12424 324 B2V0F0::Selenide, water dikinase ::Synthesizes selenophosphate from selenide and ATP.::Clostridium botulinum (strain Alaska E43 / Type E3) (taxid: 508767) confident COG0611::ThiL Thiamine monophosphate kinase [Coenzyme metabolism] 100.00::7-320 PF00586::AIRS 99.87::12-113 GO:0016259::selenocysteine metabolic process confident hh_3fd5_A_1::6-23,28-176,178-261,264-322 very confident psy15801 318 Q6C2E3::Cytochrome b-c1 complex subunit 2, mitochondrial ::This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. The core protein 2 is required for the assembly of the complex.::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) portable COG0612::PqqL Predicted Zn-dependent peptidases [General function prediction only] 99.88::144-280 PF00675::Peptidase_M16 99.90::156-277 GO:0005739::mitochondrion confident hh_1pp9_B_1::141-277 very confident psy8066 529 Q10713::Mitochondrial-processing peptidase subunit alpha ::Cleaves presequences (transit peptides) from mitochondrial protein precursors.::Homo sapiens (taxid: 9606) very confident COG0612::PqqL Predicted Zn-dependent peptidases [General function prediction only] 100.00::62-504 PF00675::Peptidase_M16 99.90::74-223 GO:0006508::proteolysis confident hh_3eoq_A_1::64-120,122-168,170-196,199-276,278-278,286-287,289-289,292-307,317-350,362-371,373-500 very confident psy14217 529 Q10713::Mitochondrial-processing peptidase subunit alpha ::Cleaves presequences (transit peptides) from mitochondrial protein precursors.::Homo sapiens (taxid: 9606) very confident COG0612::PqqL Predicted Zn-dependent peptidases [General function prediction only] 100.00::61-504 PF00675::Peptidase_M16 99.89::74-223 GO:0006508::proteolysis confident hh_3ami_A_1::60-122,124-196,199-278,287-290,292-307,318-351,363-506 very confident psy8067 239 Q10713::Mitochondrial-processing peptidase subunit alpha ::Cleaves presequences (transit peptides) from mitochondrial protein precursors.::Homo sapiens (taxid: 9606) confident COG0612::PqqL Predicted Zn-dependent peptidases [General function prediction only] 99.96::61-239 PF00675::Peptidase_M16 99.93::74-223 GO:0043234::protein complex confident hh_3ami_A_1::61-120,122-196,199-239 very confident psy15403 471 Q06010::A-factor-processing enzyme ::Involved in the N-terminal endoproteolytic cleavage of the P2 precursor of the a-factor mating pheromone. Capable of proteolysing the established mammalian insulin-degrading enzymes (IDEs) substrates amyloid-beta peptide and insulin B-chain.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0612::PqqL Predicted Zn-dependent peptidases [General function prediction only] 100.00::10-465 PF05193::Peptidase_M16_C 99.87::177-455 GO:0010815::bradykinin catabolic process confident hh_3cww_A_1::12-232,331-459 very confident psy5600 413 O74975::Probable choline-phosphate cytidylyltransferase ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0615::TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism] 100.00::48-231 PF01467::CTP_transf_2 99.62::52-228 GO:0009058::biosynthetic process confident hh_3hl4_A_1::42-134,183-256 very confident psy11147 279 Q55BZ4::Ethanolamine-phosphate cytidylyltransferase ::Plays an important role in the biosynthesis of the phospholipid phosphatidylethanolamine. Catalyzes the formation of CDP-ethanolamine.::Dictyostelium discoideum (taxid: 44689) confident COG0615::TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism] 99.97::89-224 PF06574::FAD_syn 99.69::87-217 GO:0045335::phagocytic vesicle confident hh_3elb_A_1::5-64,66-229 very confident psy11152 112 Q922E4::Ethanolamine-phosphate cytidylyltransferase ::Plays an important role in the biosynthesis of the phospholipid phosphatidylethanolamine. Catalyzes the formation of CDP-ethanolamine.::Mus musculus (taxid: 10090) confident COG0615::TagD Cytidylyltransferase [Cell envelope biogenesis, outer membrane / Lipid metabolism] 99.93::7-104 PF06574::FAD_syn 99.92::4-105 GO:0045335::phagocytic vesicle confident hh_3elb_A_1::1-104 very confident psy11686 939 Q9VWP4::Probable sulfite oxidase, mitochondrial ::::Drosophila melanogaster (taxid: 7227) portable COG0617::PcnB tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis] 100.00::543-757 PF03404::Mo-co_dimer 99.91::284-369 GO:0031090::organelle membrane confident hh_2a9d_A_1::112-162,164-168,170-306,309-348,351-372,481-521 very confident psy3863 285 Q7MAW4::(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB ::Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.::Porphyromonas gingivalis (strain ATCC BAA-308 / W83) (taxid: 242619) confident COG0621::MiaB 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis] 100.00::52-275 PF00919::UPF0004 99.97::54-158 GO:0032403::protein complex binding confident hh_2qgq_A_1::8-81 confident psy18110 249 P63087::Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ::Protein phosphatase 1 (PP1) is essential for cell division, and participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Dephosphorylates RPS6KB1. Involved in regulation of ionic conductances and long-term synaptic plasticity. May play an important role in dephosphorylating substrates such as the postsynaptic density-associated Ca(2+)/calmodulin dependent protein kinase II. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.::Mus musculus (taxid: 10090) very confident COG0622::Predicted phosphoesterase [General function prediction only] 98.25::57-129 PF00149::Metallophos 99.46::58-249 GO:0072357::PTW/PP1 phosphatase complex very confident hh_3e7a_A_1::45-249 very confident psy10860 91 Q7ZV68::Vacuolar protein sorting-associated protein 29 ::Essential component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (igf2r and m6pr) from endosomes to the trans-Golgi network. Has low protein phosphatase activity.::Danio rerio (taxid: 7955) confident COG0622::Predicted phosphoesterase [General function prediction only] 99.93::1-91 PF12850::Metallophos_2 99.69::6-90 GO:0005829::cytosol confident hh_1z2w_A_1::5-90 very confident psy10859 224 Q7ZV68::Vacuolar protein sorting-associated protein 29 ::Essential component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (igf2r and m6pr) from endosomes to the trans-Golgi network. Has low protein phosphatase activity.::Danio rerio (taxid: 7955) very confident COG0622::Predicted phosphoesterase [General function prediction only] 99.96::1-214 PF12850::Metallophos_2 99.94::1-200 GO:0045335::phagocytic vesicle confident hh_1z2w_A_1::1-71,114-224 very confident psy16794 131 Q21929::Probable L-xylulose reductase ::Catalyzes the NADPH-dependent reduction of L-xylulose, D-xylulose, D-fructose, and L-sorbose, with the highest affinity for L-xylulose.::Caenorhabditis elegans (taxid: 6239) confident COG0623::FabI Enoyl-[acyl-carrier-protein] 99.70::7-120 PF13561::adh_short_C2 99.91::7-115 GO:0050038::L-xylulose reductase (NADP+) activity confident hh_4egf_A_1::7-116 very confident psy17305 223 Q3ZC84::Cytosolic non-specific dipeptidase ::Hydrolyzes a variety of dipeptides including L-carnosine but has a strong preference for Cys-Gly.::Bos taurus (taxid: 9913) confident COG0624::ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] 99.95::15-212 PF01546::Peptidase_M20 99.66::99-166 GO:0005576::extracellular region confident rp_3dlj_A_1::2-163 very confident psy3109 58 Q99JW2::Aminoacylase-1 ::Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).::Mus musculus (taxid: 10090) confident COG0624::ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] 98.59::1-49 PF01546::Peptidase_M20 98.85::1-45 GO:0005773::vacuole confident hh_1q7l_A_1::1-46 very confident psy14393 114 P37111::Aminoacylase-1 ::Involved in the hydrolysis of N-acylated or N-acetylated amino acids (except L-aspartate).::Sus scrofa (taxid: 9823) confident COG0624::ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism] 98.99::1-82 PF07687::M20_dimer 98.82::45-89 GO:0005783::endoplasmic reticulum confident hh_2rb7_A_1::1-19,25-39,43-86 very confident psy15093 179 Q8WQA4::Chloride intracellular channel exc-4 ::May insert into membranes and form chloride ion channels. Involved in the formation of the excretory canal. Required to prevent cystic lumenal expansions in the excretory cell. Not required for formation of the initial tube, but is required for regulating the size of the tube lumen as it grows.::Caenorhabditis elegans (taxid: 6239) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.94::4-152 PF00043::GST_C 99.47::77-149 GO:0005509::calcium ion binding very confident hh_2yv7_A_1::4-173 very confident psy3262 103 Q9VHD2::Probable maleylacetoacetate isomerase 2 ::::Drosophila melanogaster (taxid: 7227) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.73::1-103 PF00043::GST_C 99.75::31-103 GO:0006749::glutathione metabolic process confident hh_2cz2_A_1::1-103 very confident psy6388 480 Q9NJH0::Elongation factor 1-gamma ::Probably plays a role in anchoring the complex to other cellular components.::Drosophila melanogaster (taxid: 7227) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.95::6-199 PF00647::EF1G 100.00::263-368 GO:0005634::nucleus confident hh_1pbu_A_1::264-331,389-480 very confident psy4819 387 P70102::Eukaryotic translation elongation factor 1 epsilon-1 ::Positive modulator of ATM response to DNA damage.::Cricetulus griseus (taxid: 10029) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.85::52-225 PF00647::EF1G 99.90::279-376 GO:0043229::intracellular organelle confident hh_2uz8_A_1::90-98,100-125,127-235 very confident psy13751 149 Q8L727::Glutathione S-transferase T2 ::May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.::Arabidopsis thaliana (taxid: 3702) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.83::13-144 PF02798::GST_N 99.66::12-76 GO:0006749::glutathione metabolic process confident rp_1r5a_A_1::31-113 very confident psy10373 215 Q9D4P7::Glutathione S-transferase theta-4 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.::Mus musculus (taxid: 10090) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.82::45-199 PF02798::GST_N 98.97::53-110 GO:0006749::glutathione metabolic process confident hh_3ein_A_1::52-71,74-157,160-198 very confident psy17289 336 O88741::Ganglioside-induced differentiation-associated protein 1 ::May function in a signal transduction pathway responsible for ganglioside-induced neurite differentiation. May also have a role in protecting myelin membranes against free radical-mediated damage.::Mus musculus (taxid: 10090) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.91::1-242 PF02798::GST_N 99.41::1-58 GO:0043231::intracellular membrane-bounded organelle confident hh_1gnw_A_1::1-88,99-104,114-118,128-134,156-184,189-189,198-244 very confident psy9879 115 O73888::Hematopoietic prostaglandin D synthase ::Bifunctional enzyme which catalyzes both the conversion of PGH2 to PGD2, a prostaglandin involved in smooth muscle contraction/relaxation and a potent inhibitor of platelet aggregation, and the conjugation of glutathione with a wide range of aryl halides, organic isothiocyanates and alpha,beta-unsaturated carbonyls. Also exhibits low glutathione-peroxidase activity towards cumene hydroperoxide and t-butyl hydroperoxide.::Gallus gallus (taxid: 9031) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.71::8-93 PF02798::GST_N 99.63::8-64 GO:0044428::nuclear part confident hh_2on5_A_1::8-22,28-35,37-75,77-94 very confident psy9882 81 O73888::Hematopoietic prostaglandin D synthase ::Bifunctional enzyme which catalyzes both the conversion of PGH2 to PGD2, a prostaglandin involved in smooth muscle contraction/relaxation and a potent inhibitor of platelet aggregation, and the conjugation of glutathione with a wide range of aryl halides, organic isothiocyanates and alpha,beta-unsaturated carbonyls. Also exhibits low glutathione-peroxidase activity towards cumene hydroperoxide and t-butyl hydroperoxide.::Gallus gallus (taxid: 9031) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.55::2-62 PF02798::GST_N 99.25::2-34 GO:0044428::nuclear part confident hh_1m0u_A_1::3-45,47-62 very confident psy13308 166 Q9HE00::Metaxin-1 ::Involved in transport of proteins into the mitochondrion.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 98.58::54-127 PF11801::Tom37_C 99.79::2-110 GO:0005739::mitochondrion confident hh_1b8x_A_1::54-100,107-126 confident psy7045 182 Q9VHB6::Metaxin-1 homolog ::Involved in transport of proteins into the mitochondrion. Essential for embryonic development.::Drosophila melanogaster (taxid: 7227) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 97.93::65-139 PF11801::Tom37_C 99.86::2-124 GO:0005739::mitochondrion confident hh_2on5_A_1::67-84,87-113,117-117,121-139 portable psy2680 178 Q95RI5::Failed axon connections ::Together with Abl, involved in embryonic axonal development.::Drosophila melanogaster (taxid: 7227) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 98.65::60-138 PF13410::GST_C_2 99.33::58-129 GO:0005739::mitochondrion confident hh_3ubk_A_1::59-112,117-133,136-144 confident psy7998 142 P20135::Glutathione S-transferase theta-1 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.::Gallus gallus (taxid: 9031) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.95::1-142 PF13410::GST_C_2 99.55::79-142 GO:0006749::glutathione metabolic process confident hh_3vk9_A_1::1-36,38-76,78-123,125-142 very confident psy15098 92 no hit no match COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 91.63::39-76 PF13417::GST_N_3 97.43::40-76 GO:0005509::calcium ion binding confident hh_2yv7_A_1::23-76 very confident psy10805 253 O88441::Metaxin-2 ::Involved in transport of proteins into the mitochondrion.::Mus musculus (taxid: 10090) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.93::49-248 PF13417::GST_N_3 99.67::63-123 GO:0005739::mitochondrion confident hh_1b8x_A_1::49-54,63-123,125-141,143-143,148-151,157-170,172-223,230-248 confident psy2688 586 Q9H7Z7::Prostaglandin E synthase 2 ::Isomerase that catalyzes the conversion of unstable intermediate of prostaglandin E2 H2 (PGH2) into the more stable prostaglandin E2 (PGE2) form. May also have transactivation activity toward IFN-gamma (IFNG), possibly via an interaction with CEBPB; however, the relevance of transcription activation activity remains unclear.::Homo sapiens (taxid: 9606) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.85::114-421 PF13417::GST_N_3 99.36::116-186 GO:0005739::mitochondrion confident rp_1z9h_A_1::102-192,194-278,317-368,371-425 very confident psy17288 322 P42760::Glutathione S-transferase F6 ::Involved in camalexin biosynthesis by probably catalyzing the conjugation of GSH with indole-3-acetonitrile (IAN). May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides.::Arabidopsis thaliana (taxid: 3702) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.94::39-291 PF13417::GST_N_3 99.73::41-115 GO:0005773::vacuole confident hh_1gnw_A_1::38-146,166-168,172-173,184-186,201-201,205-274,282-286,288-293 very confident psy3758 202 Q7VLK4::Stringent starvation protein A homolog ::Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme.::Haemophilus ducreyi (strain 35000HP / ATCC 700724) (taxid: 233412) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 100.00::1-190 PF13417::GST_N_3 99.87::3-76 GO:0005829::cytosol confident hh_4hoj_A_1::1-110,113-201 very confident psy13350 202 Q7VLK4::Stringent starvation protein A homolog ::Forms an equimolar complex with the RNA polymerase holoenzyme (RNAP) but not with the core enzyme.::Haemophilus ducreyi (strain 35000HP / ATCC 700724) (taxid: 233412) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 100.00::1-190 PF13417::GST_N_3 99.87::3-76 GO:0005829::cytosol confident hh_4hoj_A_1::1-110,113-201 very confident psy2059 126 P20432::Glutathione S-transferase 1-1 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Has DDT dehydrochlorinase activity.::Drosophila melanogaster (taxid: 7227) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.93::3-120 PF13417::GST_N_3 99.87::5-84 GO:0006749::glutathione metabolic process confident hh_3vk9_A_1::1-57,61-122 very confident psy13748 296 P30711::Glutathione S-transferase theta-1 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Acts on 1,2-epoxy-3-(4-nitrophenoxy)propane, phenethylisothiocyanate 4-nitrobenzyl chloride and 4-nitrophenethyl bromide. Displays glutathione peroxidase activity with cumene hydroperoxide.::Homo sapiens (taxid: 9606) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.97::3-285 PF13417::GST_N_3 99.79::5-81 GO:0006749::glutathione metabolic process confident hh_3vk9_A_1::1-109,198-209,211-279,281-290 very confident psy14324 203 P41043::Glutathione S-transferase S1 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. May be involved in the detoxification of metabolites produced during cellular division and morphogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 100.00::4-192 PF13417::GST_N_3 99.81::6-76 GO:0006749::glutathione metabolic process very confident hh_1m0u_A_1::1-203 very confident psy13750 173 Q9D4P7::Glutathione S-transferase theta-4 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.::Mus musculus (taxid: 10090) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.97::3-171 PF13417::GST_N_3 99.82::5-78 GO:0006749::glutathione metabolic process confident hh_1r5a_A_1::1-96,108-108,110-123,125-171 very confident psy14325 103 O35543::Hematopoietic prostaglandin D synthase ::Bifunctional enzyme which catalyzes both the conversion of PGH2 to PGD2, a prostaglandin involved in smooth muscle contraction/relaxation and a potent inhibitor of platelet aggregation, and the conjugation of glutathione with a wide range of aryl halides and organic isothiocyanates. Also exhibits low glutathione-peroxidase activity towards cumene hydroperoxide.::Rattus norvegicus (taxid: 10116) confident COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.90::4-96 PF13417::GST_N_3 99.89::6-76 GO:0031090::organelle membrane confident hh_2on5_A_1::1-100 very confident psy13369 311 Q8K2Q2::Glutathione S-transferase omega-2 ::Exhibits glutathione-dependent thiol transferase activity. Has high dehydroascorbate reductase activity and may contribute to the recycling of ascorbic acid. Participates in the biotransformation of inorganic arsenic and reduces monomethylarsonic acid (MMA).::Mus musculus (taxid: 10090) portable COG0625::Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] 99.90::22-208 PF13417::GST_N_3 99.75::215-288 GO:0055114::oxidation-reduction process confident hh_3vln_A_2::209-288,290-310 very confident psy12791 393 P32929::Cystathionine gamma-lyase ::Catalyzes the last step in the trans-sulfuration pathway from methionine to cysteine. Has broad substrate specificity. Converts cystathionine to cysteine, ammonia and 2-oxobutanoate. Converts two cysteine molecules to lanthionine and hydrogen sulfide. Can also accept homocysteine as substrate. Specificity depends on the levels of the endogenous substrates. Generates the endogenous signaling molecule hydrogen sulfide (H2S), and so contributes to the regulation of blood pressure. Acts as a cysteine-protein sulfhydrase by mediating sulfhydration of target proteins: sulfhydration consists of converting -SH groups into -SSH on specific cysteine residues of target proteins such as GAPDH, PTPN1 and NF-kappa-B subunit RELA, thereby regulating their function.::Homo sapiens (taxid: 9606) very confident COG0626::MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism] 100.00::5-390 PF01053::Cys_Met_Meta_PP 100.00::11-388 GO:0005634::nucleus very confident hh_1pff_A_1::63-172,174-207,209-312,314-390 very confident psy15347 101 Q9R0P3::S-formylglutathione hydrolase ::Serine hydrolase involved in the detoxification of formaldehyde.::Mus musculus (taxid: 10090) confident COG0627::Predicted esterase [General function prediction only] 99.71::1-94 PF00756::Esterase 98.69::1-74 GO:0005794::Golgi apparatus confident rp_3fcx_A_1::1-67 very confident psy14498 171 Q8K933::Single-stranded DNA-binding protein ::This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair.::Buchnera aphidicola subsp. Schizaphis graminum (strain Sg) (taxid: 198804) very confident COG0629::Ssb Single-stranded DNA-binding protein [DNA replication, recombination, and repair] 100.00::2-113 PF00436::SSB 99.97::4-108 GO:0005576::extracellular region confident hh_3tqy_A_1::1-116 very confident psy7329 336 Q61074::Protein phosphatase 1G ::May be involved in regulation of cell cycle.::Mus musculus (taxid: 10090) portable COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 100.00::1-299 PF00481::PP2C 100.00::1-288 GO:0005634::nucleus confident hh_2i0o_A_1::1-30,33-33,37-154,172-172,174-178,180-182,193-195,209-214,220-222,224-227,229-296 very confident psy10596 136 Q9LNW3::Protein phosphatase 2C 3 ::Involved in the negative regulation of the K(+) potassium channel AKT1 by its dephosphorylation, antagonistically to CIPK proteins (e.g. CIPK23).::Arabidopsis thaliana (taxid: 3702) portable COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.44::51-135 PF00481::PP2C 99.89::3-134 GO:0005634::nucleus confident hh_2isn_A_1::3-15,17-23,28-31,33-40,49-80,82-126,129-135 very confident psy12423 567 Q6ZVD8::PH domain leucine-rich repeat-containing protein phosphatase 2 ::Protein phosphatase that mediates dephosphorylation of 'Ser-473' of AKT1, 'Ser-660' of PRKCB isoform beta-II and 'Ser-657' of PRKCA. AKT1 regulates the balance between cell survival and apoptosis through a cascade that primarily alters the function of transcription factors that regulate pro- and antiapoptotic genes. Dephosphorylation of 'Ser-473' of AKT1 triggers apoptosis and decreases cell proliferation. Also controls the phosphorylation of AKT3. Dephosphorylation of PRKCA and PRKCB leads to their destabilization and degradation. Inhibits cancer cell proliferation and may act as a tumor suppressor.::Homo sapiens (taxid: 9606) portable COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.91::302-477 PF00481::PP2C 99.91::301-467 GO:0005737::cytoplasm confident hh_3o53_A_1::4-43,80-120,123-210,214-256,258-293 very confident psy16174 157 P49596::Probable protein phosphatase 2C T23F11.1 ::::Caenorhabditis elegans (taxid: 6239) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.79::1-145 PF00481::PP2C 99.93::18-133 GO:0005829::cytosol confident hh_2p8e_A_1::3-11,20-123,130-144 very confident psy6963 212 P49596::Probable protein phosphatase 2C T23F11.1 ::::Caenorhabditis elegans (taxid: 6239) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.78::95-212 PF00481::PP2C 99.85::98-212 GO:0005829::cytosol confident hh_2p8e_A_1::75-212 very confident psy8667 163 P49596::Probable protein phosphatase 2C T23F11.1 ::::Caenorhabditis elegans (taxid: 6239) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.74::13-129 PF00481::PP2C 99.93::1-118 GO:0005829::cytosol confident hh_2p8e_A_1::2-108,115-128 very confident psy605 348 Q9QZ67::Protein phosphatase 1D ::Required for the relief of p53-dependent checkpoint mediated cell cycle arrest. Binds to and dephosphorylates 'Ser-18' of TP53 and 'Ser-345' of CHEK1 which contributes to the functional inactivation of these proteins.::Mus musculus (taxid: 10090) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 100.00::2-325 PF00481::PP2C 100.00::9-314 GO:0005829::cytosol confident hh_2i44_A_1::7-34,37-104,111-146,149-182,190-192,197-200,207-244,247-278,287-303,309-323 very confident psy7332 71 Q67UP9::Probable protein phosphatase 2C 58 ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 97.71::20-68 PF00481::PP2C 98.92::23-69 GO:0006470::protein dephosphorylation confident hh_2i0o_A_1::1-47,57-69 very confident psy8053 492 Q9P0J1::[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial ::Catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.::Homo sapiens (taxid: 9606) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.95::125-485 PF00481::PP2C 100.00::130-447 GO:0006470::protein dephosphorylation confident hh_2pnq_A_1::100-488 very confident psy14703 356 A5PJZ2::Protein phosphatase 1L ::Acts as a suppressor of the SAPK signaling pathways by associating with and dephosphorylating MAP3K7/TAK1 and MAP3K5, and by attenuating the association between MAP3K7/TAK1 and MAP2K4 or MAP2K6.::Bos taurus (taxid: 9913) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 100.00::1-341 PF00481::PP2C 100.00::1-330 GO:0031090::organelle membrane confident hh_3d8k_A_1::152-171,176-204,206-277,280-342 very confident psy4509 369 Q5U3N5::Protein phosphatase PTC7 homolog ::::Danio rerio (taxid: 7955) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 100.00::89-368 PF00481::PP2C 99.94::93-331 GO:0044446::intracellular organelle part confident hh_2p8e_A_1::91-129,135-145,148-185,213-217,220-248,251-310,313-331,355-367 very confident psy4512 101 Q8NI37::Protein phosphatase PTC7 homolog ::::Homo sapiens (taxid: 9606) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.61::3-100 PF00481::PP2C 99.30::3-61 GO:0044446::intracellular organelle part confident hh_3rnr_A_1::3-40,47-48,53-62,85-99 very confident psy7331 139 Q7K4Q5::Probable protein phosphatase CG10417 ::::Drosophila melanogaster (taxid: 7227) confident COG0631::PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] 99.76::21-138 PF00481::PP2C 99.91::23-138 GO:0048523::negative regulation of cellular process confident hh_2i0o_A_1::1-125,128-138 very confident psy8859 109 Q89A15::2Fe-2S ferredoxin ::Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.::Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) (taxid: 224915) very confident COG0633::Fdx Ferredoxin [Energy production and conversion] 99.92::1-100 PF00111::Fer2 99.74::15-92 GO:0022900::electron transport chain confident hh_3ah7_A_1::1-108 very confident psy1435 171 P37193::Adrenodoxin-like protein, mitochondrial ::::Drosophila melanogaster (taxid: 7227) very confident COG0633::Fdx Ferredoxin [Energy production and conversion] 99.85::44-157 PF00111::Fer2 99.55::52-100 GO:0042803::protein homodimerization activity confident hh_2y5c_A_1::41-125,137-159 very confident psy1437 232 P37193::Adrenodoxin-like protein, mitochondrial ::::Drosophila melanogaster (taxid: 7227) very confident COG0633::Fdx Ferredoxin [Energy production and conversion] 99.87::116-218 PF04212::MIT 99.78::3-70 GO:0055114::oxidation-reduction process confident rp_2y5c_A_1::113-220 very confident psy2378 956 Q8ZKH4::tRNA-dihydrouridine synthase A ::Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs.::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) confident COG0635::HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] 100.00::622-955 PF01207::Dus 100.00::14-277 GO:0005829::cytosol confident hh_1g57_A_1::270-437 very confident psy2383 391 P54304::Oxygen-independent coproporphyrinogen-III oxidase 1 ::Anaerobic transformation of coproporphyrinogen-III into protoporphyrinogen-IX.::Bacillus subtilis (strain 168) (taxid: 224308) confident COG0635::HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] 100.00::16-389 PF04055::Radical_SAM 99.74::24-192 GO:0004109::coproporphyrinogen oxidase activity confident hh_1olt_A_1::14-283,288-390 very confident psy15658 235 P23968::V-type proton ATPase subunit c'' ::Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0636::AtpE F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] 99.65::118-187 PF00137::ATP-synt_C 99.64::120-185 GO:0033181::plasma membrane proton-transporting V-type ATPase complex very confident hh_2bl2_A_1::21-101,113-185 very confident psy3709 119 P05496::ATP synthase lipid-binding protein, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain. A homomeric c-ring of probably 10 subunits is part of the complex rotary element.::Homo sapiens (taxid: 9606) very confident COG0636::AtpE F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] 99.82::48-118 PF00137::ATP-synt_C 99.69::50-118 GO:0045471::response to ethanol confident hh_2xnd_J_1::48-117 very confident psy3711 141 P56384::ATP synthase lipid-binding protein, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain. A homomeric c-ring of probably 10 subunits is part of the complex rotary element.::Mus musculus (taxid: 10090) very confident COG0636::AtpE F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] 99.79::70-140 PF00137::ATP-synt_C 99.65::72-140 GO:0045471::response to ethanol confident hh_2xnd_J_1::69-139 very confident psy11193 340 P23380::V-type proton ATPase 16 kDa proteolipid subunit ::Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) confident COG0636::AtpE F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] 99.56::176-245 PF00137::ATP-synt_C 99.52::178-242 GO:0048786::presynaptic active zone confident hh_2bl2_A_2::2-63,66-106,134-165 very confident psy6109 192 P23380::V-type proton ATPase 16 kDa proteolipid subunit ::Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) very confident COG0636::AtpE F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion] 99.69::125-192 PF00137::ATP-synt_C 99.70::127-192 GO:0048786::presynaptic active zone very confident hh_2bl2_A_1::50-60,68-98,119-192 very confident psy5101 111 P38624::Proteasome subunit beta type-1 ::This subunit is necessary for the peptidylglutamyl-peptide hydrolyzing activity.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.97::2-111 PF00227::Proteasome 99.94::5-110 GO:0005634::nucleus confident hh_1iru_H_1::2-111 very confident psy5094 251 Q5E987::Proteasome subunit alpha type-5 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Bos taurus (taxid: 9913) very confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::6-243 PF00227::Proteasome 100.00::31-219 GO:0005730::nucleolus very confident hh_1iru_E_1::1-240 very confident psy9489 279 Q9USQ9::Probable proteasome subunit beta type-7 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.91::91-259 PF00227::Proteasome 99.86::95-259 GO:0005829::cytosol confident rp_1iru_N_1::162-279 very confident psy2800 184 Q9V0N9::Proteasome subunit beta 2 ::Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.::Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::8-180 PF00227::Proteasome 100.00::11-181 GO:0005829::cytosol confident hh_1iru_M_1::5-180 very confident psy1779 204 Q9XI05::Proteasome subunit beta type-3-A ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Arabidopsis thaliana (taxid: 3702) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::4-196 PF00227::Proteasome 100.00::4-189 GO:0005829::cytosol confident hh_1iru_M_1::3-98,100-113,115-130,132-204 very confident psy10322 261 P34286::Proteasome subunit beta type-1 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Caenorhabditis elegans (taxid: 6239) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::14-254 PF00227::Proteasome 100.00::21-246 GO:0005839::proteasome core complex confident hh_1iru_M_1::16-62,68-162,202-261 very confident psy12630 160 Q9R1P3::Proteasome subunit beta type-2 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. This subunit has a chymotrypsin-like activity.::Mus musculus (taxid: 10090) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.97::1-141 PF00227::Proteasome 99.94::1-124 GO:0005839::proteasome core complex confident hh_1ryp_K_1::1-136 very confident psy4377 81 Q9USQ9::Probable proteasome subunit beta type-7 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.72::21-81 PF00227::Proteasome 99.68::20-81 GO:0005839::proteasome core complex confident hh_1iru_N_1::17-81 very confident psy3468 68 P21670::Proteasome subunit alpha type-4 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Rattus norvegicus (taxid: 10116) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.76::1-66 PF00227::Proteasome 99.54::1-66 GO:0005875::microtubule associated complex confident rp_1iru_C_1::1-55 very confident psy5099 50 P28073::Proteasome subunit beta type-6 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Rattus norvegicus (taxid: 10116) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 98.43::25-50 PF00227::Proteasome 98.38::25-49 GO:0006521::regulation of cellular amino acid metabolic process confident hh_1iru_N_1::22-49 very confident psy2869 352 P49722::Proteasome subunit alpha type-2 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. PSMA2 may have a potential regulatory effect on another component(s) of the proteasome complex through tyrosine phosphorylation.::Mus musculus (taxid: 10090) very confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::1-219 PF00227::Proteasome 100.00::15-198 GO:0006521::regulation of cellular amino acid metabolic process confident hh_1iru_B_1::1-218 very confident psy13966 174 Q9CWH6::Proteasome subunit alpha type-7-like ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity (By similarity). This may be a testis-specific subunit.::Mus musculus (taxid: 10090) very confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::1-161 PF00227::Proteasome 99.98::1-138 GO:0006521::regulation of cellular amino acid metabolic process confident hh_1iru_D_1::1-169 very confident psy14210 312 Q54BC8::Proteasome subunit beta type-5 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Dictyostelium discoideum (taxid: 44689) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::3-305 PF00227::Proteasome 100.00::2-282 GO:0008233::peptidase activity confident hh_1iru_L_1::6-38,128-186,193-196,199-208,210-307 very confident psy8777 291 Q9QUM9::Proteasome subunit alpha type-6 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Mus musculus (taxid: 10090) very confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::7-291 PF00227::Proteasome 100.00::122-291 GO:0016363::nuclear matrix very confident hh_1iru_A_1::1-35,37-94,184-291 very confident psy6667 111 P49722::Proteasome subunit alpha type-2 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. PSMA2 may have a potential regulatory effect on another component(s) of the proteasome complex through tyrosine phosphorylation.::Mus musculus (taxid: 10090) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::1-109 PF00227::Proteasome 99.91::15-110 GO:0019773::proteasome core complex, alpha-subunit complex confident hh_1iru_B_1::1-110 very confident psy11707 177 A7I841::Proteasome subunit beta ::Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation.::Methanoregula boonei (strain 6A8) (taxid: 456442) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::3-171 PF00227::Proteasome 100.00::7-156 GO:0019774::proteasome core complex, beta-subunit complex confident hh_1iru_L_1::3-162,165-172 very confident psy15275 205 P25451::Proteasome subunit beta type-3 ::The proteasome degrades poly-ubiquitinated proteins in the cytoplasm and in the nucleus. It is essential for the regulated turnover of proteins and for the removal of misfolded proteins. The proteasome is a multicatalytic proteinase complex that is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. It has an ATP-dependent proteolytic activity. This subunit may participate in the trypsin-like activity of the enzyme complex.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) very confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::5-198 PF00227::Proteasome 100.00::6-190 GO:0019774::proteasome core complex, beta-subunit complex very confident hh_1ryp_J_1::2-46,48-205 very confident psy10990 486 O23710::Proteasome subunit beta type-7-A ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Arabidopsis thaliana (taxid: 3702) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::204-450 PF00227::Proteasome 100.00::222-432 GO:0034515::proteasome storage granule confident hh_1iru_I_1::226-316,346-474 very confident psy14445 252 O23715::Proteasome subunit alpha type-3 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Arabidopsis thaliana (taxid: 3702) very confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::6-239 PF00227::Proteasome 100.00::31-216 GO:0034515::proteasome storage granule very confident hh_1iru_G_1::2-247 very confident psy8684 226 P38624::Proteasome subunit beta type-1 ::This subunit is necessary for the peptidylglutamyl-peptide hydrolyzing activity.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::8-224 PF00227::Proteasome 100.00::14-200 GO:0034515::proteasome storage granule confident hh_3unf_N_1::18-84,89-134,137-204,206-222 very confident psy2074 184 P38624::Proteasome subunit beta type-1 ::This subunit is necessary for the peptidylglutamyl-peptide hydrolyzing activity.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::3-183 PF00227::Proteasome 100.00::25-183 GO:0034515::proteasome storage granule confident rp_1iru_H_1::29-181 very confident psy16847 208 Q3T0X5::Proteasome subunit alpha type-1 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. Mediates the lipopolysaccharide-induced signal macrophage proteasome. Might be involved in the anti-inflammatory response of macrophages during the interaction with C.albicans heat-inactivated cells.::Bos taurus (taxid: 9913) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::2-193 PF00227::Proteasome 100.00::4-190 GO:0034515::proteasome storage granule confident hh_1iru_F_1::1-193 very confident psy1918 251 Q3T0X5::Proteasome subunit alpha type-1 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity. Mediates the lipopolysaccharide-induced signal macrophage proteasome. Might be involved in the anti-inflammatory response of macrophages during the interaction with C.albicans heat-inactivated cells.::Bos taurus (taxid: 9913) very confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::9-244 PF00227::Proteasome 100.00::34-220 GO:0034515::proteasome storage granule very confident hh_1iru_F_1::6-243 very confident psy15384 260 Q8SQN7::Probable proteasome subunit beta type-2 ::The proteasome degrades poly-ubiquitinated proteins in the cytoplasm and in the nucleus. It is essential for the regulated turnover of proteins and for the removal of misfolded proteins. The proteasome is a multicatalytic proteinase complex that is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. It has an ATP-dependent proteolytic activity.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 100.00::2-203 PF00227::Proteasome 100.00::2-187 GO:0034515::proteasome storage granule confident hh_1iru_M_1::2-25,31-191,193-195 very confident psy7294 123 no hit no match COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.90::4-115 PF00227::Proteasome 99.84::6-104 GO:0044446::intracellular organelle part confident hh_1iru_K_1::6-29,31-115 very confident psy13971 153 P22769::Proteasome subunit alpha type-7-1 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Drosophila melanogaster (taxid: 7227) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.94::4-151 PF10584::Proteasome_A_N 99.56::6-28 GO:0005829::cytosol confident hh_3h4p_A_1::1-41,65-74,77-150 very confident psy6595 108 P21670::Proteasome subunit alpha type-4 ::The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH. The proteasome has an ATP-dependent proteolytic activity.::Rattus norvegicus (taxid: 10116) confident COG0638::PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones] 99.65::2-84 PF10584::Proteasome_A_N 99.09::37-59 GO:0005875::microtubule associated complex confident rp_1iru_C_1::49-102 very confident psy11398 336 P67775::Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform ::PP2A can modulate the activity of phosphorylase B kinase casein kinase 2, mitogen-stimulated S6 kinase, and MAP-2 kinase. Cooperates with SGOL2 to protect centromeric cohesin from separase-mediated cleavage in oocytes specifically during meiosis I (By similarity). Can dephosphorylate SV40 large T antigen and p53/TP53. Dephosphorylates SV40 large T antigen, preferentially on serine residues 120, 123, 677, and perhaps 679. The C subunit was most active, followed by the AC form, which was more active than the ABC form, and activity of all three forms was strongly stimulated by manganese, and to a lesser extent by magnesium. Dephosphorylation by the AC form, but not C or ABC form is inhibited by small T antigen. Activates RAF1 by dephosphorylating it at 'Ser-259'.::Homo sapiens (taxid: 9606) confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 98.90::129-306 PF00149::Metallophos 99.24::56-130 GO:0005829::cytosol confident hh_3e7a_A_1::12-143,145-179,186-188,215-291,293-318 very confident psy248 283 Q9LHE7::Phytochrome-associated serine/threonine-protein phosphatase 3 ::Dephosphorylates phosphorylated phytochromes, with a preference toward Pfr forms. Plays a major role in the photoperiodic control of flowering time in long days by modulating phytochrome signals in flowering time control.::Arabidopsis thaliana (taxid: 3702) confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 98.26::131-240 PF00149::Metallophos 99.13::59-135 GO:0005829::cytosol confident hh_2ie4_C_1::34-49,51-283 very confident psy16875 324 P62142::Serine/threonine-protein phosphatase PP1-beta catalytic subunit ::Protein phosphatase (PP1) is essential for cell division, it participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Involved in regulation of ionic conductances and long-term synaptic plasticity. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.::Rattus norvegicus (taxid: 10116) very confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 99.05::129-272 PF00149::Metallophos 99.45::57-250 GO:0017018::myosin phosphatase activity very confident hh_3e7a_A_1::4-299 very confident psy13699 308 Q5R6K8::Serine/threonine-protein phosphatase 4 catalytic subunit ::Protein phosphatase that is involved in many processes such as microtubule organization at centrosomes, maturation of spliceosomal snRNPs, apoptosis, DNA repair, tumor necrosis factor (TNF)-alpha signaling, activation of c-Jun N-terminal kinase MAPK8, regulation of histone acetylation, DNA damage checkpoint signaling, NF-kappa-B activation and cell migration. The PPP4C-PPP4R1 PP4 complex may play a role in dephosphorylation and regulation of HDAC3. The PPP4C-PPP4R2-PPP4R3A PP4 complex specifically dephosphorylates H2AFX phosphorylated on Ser-140 (gamma-H2AFX) generated during DNA replication and required for DNA DSB repair. Dephosphorylates NDEL1 at CDK1 phosphorylation sites and negatively regulates CDK1 activity in interphase (By similarity). In response to DNA damage, catalyzes RPA2 dephosphorylation, an essential step for DNA repair since it allows the efficient RPA2-mediated recruitment of RAD51 to chromatin.::Pongo abelii (taxid: 9601) very confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 99.02::121-264 PF00149::Metallophos 99.42::48-242 GO:0030289::protein phosphatase 4 complex very confident hh_2ie4_C_1::4-298,300-308 very confident psy16023 416 P63328::Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform ::Calcium-dependent, calmodulin-stimulated protein phosphatase. This subunit may have a role in the calmodulin activation of calcineurin. Dephosphorylates DNM1L and HSPB1 (By similarity). Dephosphorylates SSH1.::Mus musculus (taxid: 10090) confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 98.68::176-365 PF00149::Metallophos 99.15::103-177 GO:0030424::axon very confident hh_3ll8_A_1::33-56,58-248,253-265,272-290,311-312,318-344,346-367,372-416 very confident psy13083 255 P62142::Serine/threonine-protein phosphatase PP1-beta catalytic subunit ::Protein phosphatase (PP1) is essential for cell division, it participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Involved in regulation of ionic conductances and long-term synaptic plasticity. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.::Rattus norvegicus (taxid: 10116) confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 99.45::23-167 PF00149::Metallophos 96.84::4-143 GO:0072357::PTW/PP1 phosphatase complex very confident hh_3e7a_A_1::2-168,226-249 very confident psy1403 384 P63087::Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ::Protein phosphatase 1 (PP1) is essential for cell division, and participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Dephosphorylates RPS6KB1. Involved in regulation of ionic conductances and long-term synaptic plasticity. May play an important role in dephosphorylating substrates such as the postsynaptic density-associated Ca(2+)/calmodulin dependent protein kinase II. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.::Mus musculus (taxid: 10090) very confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 99.15::199-344 PF00149::Metallophos 99.41::128-321 GO:0072357::PTW/PP1 phosphatase complex very confident hh_3e7a_A_1::75-370 very confident psy5889 326 P63087::Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ::Protein phosphatase 1 (PP1) is essential for cell division, and participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Dephosphorylates RPS6KB1. Involved in regulation of ionic conductances and long-term synaptic plasticity. May play an important role in dephosphorylating substrates such as the postsynaptic density-associated Ca(2+)/calmodulin dependent protein kinase II. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.::Mus musculus (taxid: 10090) very confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 99.05::131-274 PF00149::Metallophos 99.47::58-252 GO:0072357::PTW/PP1 phosphatase complex very confident hh_3e7a_A_1::7-300 very confident psy3331 214 Q9LHE7::Phytochrome-associated serine/threonine-protein phosphatase 3 ::Dephosphorylates phosphorylated phytochromes, with a preference toward Pfr forms. Plays a major role in the photoperiodic control of flowering time in long days by modulating phytochrome signals in flowering time control.::Arabidopsis thaliana (taxid: 3702) confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 98.14::83-172 PF08321::PPP5 92.55::5-80 GO:0005829::cytosol confident hh_2ie4_C_1::3-24,62-214 very confident psy5383 143 P63087::Serine/threonine-protein phosphatase PP1-gamma catalytic subunit ::Protein phosphatase 1 (PP1) is essential for cell division, and participates in the regulation of glycogen metabolism, muscle contractility and protein synthesis. Dephosphorylates RPS6KB1. Involved in regulation of ionic conductances and long-term synaptic plasticity. May play an important role in dephosphorylating substrates such as the postsynaptic density-associated Ca(2+)/calmodulin dependent protein kinase II. Component of the PTW/PP1 phosphatase complex, which plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.::Mus musculus (taxid: 10090) confident COG0639::ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] 97.84::14-91 no hit no match GO:0005829::cytosol confident hh_3e7a_A_1::3-14,16-117 very confident psy14497 561 Q5RDD3::Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial ::Accepts electrons from ETF and reduces ubiquinone.::Pongo abelii (taxid: 9601) very confident COG0644::FixC Dehydrogenases (flavoproteins) [Energy production and conversion] 100.00::20-406 PF01494::FAD_binding_3 99.97::22-389 GO:0050660::flavin adenine dinucleotide binding very confident hh_2gmh_A_1::16-112,115-561 very confident psy14496 561 Q5RDD3::Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial ::Accepts electrons from ETF and reduces ubiquinone.::Pongo abelii (taxid: 9601) very confident COG0644::FixC Dehydrogenases (flavoproteins) [Energy production and conversion] 100.00::20-405 PF01494::FAD_binding_3 99.97::22-389 GO:0050660::flavin adenine dinucleotide binding very confident hh_2gmh_A_1::16-112,115-561 very confident psy9486 165 Q5RDD3::Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial ::Accepts electrons from ETF and reduces ubiquinone.::Pongo abelii (taxid: 9601) confident COG0644::FixC Dehydrogenases (flavoproteins) [Energy production and conversion] 99.74::1-160 PF01946::Thi4 99.09::46-152 GO:0050660::flavin adenine dinucleotide binding confident hh_2gmh_A_1::1-160 very confident psy2240 182 Q921G7::Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial ::Accepts electrons from ETF and reduces ubiquinone.::Mus musculus (taxid: 10090) confident COG0644::FixC Dehydrogenases (flavoproteins) [Energy production and conversion] 99.86::21-180 PF01946::Thi4 99.75::21-181 GO:0051539::4 iron, 4 sulfur cluster binding confident hh_2gmh_A_1::19-180 very confident psy2242 246 Q921G7::Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial ::Accepts electrons from ETF and reduces ubiquinone.::Mus musculus (taxid: 10090) confident COG0644::FixC Dehydrogenases (flavoproteins) [Energy production and conversion] 99.95::5-163 PF04820::Trp_halogenase 99.20::9-146 GO:0006635::fatty acid beta-oxidation confident hh_2gmh_A_1::7-129,133-246 very confident psy9487 101 Q5RDD3::Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial ::Accepts electrons from ETF and reduces ubiquinone.::Pongo abelii (taxid: 9601) confident COG0644::FixC Dehydrogenases (flavoproteins) [Energy production and conversion] 99.43::10-99 PF04820::Trp_halogenase 99.16::11-97 GO:0050660::flavin adenine dinucleotide binding confident hh_2gmh_A_1::7-101 very confident psy13907 698 Q54DI8::Down syndrome critical region protein 3 homolog ::::Dictyostelium discoideum (taxid: 44689) confident COG0646::MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism] 100.00::268-582 PF02574::S-methyl_trans 100.00::277-582 GO:0008152::metabolic process confident hh_1q7z_A_2::1-8,10-13,15-34,46-46,48-61,69-71,73-150,154-166,196-210,217-217,223-243,247-253,261-266,270-271,273-335 very confident psy17092 183 Q91WM2::Cat eye syndrome critical region protein 5 homolog ::::Mus musculus (taxid: 10090) confident COG0647::NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] 99.94::2-178 PF13344::Hydrolase_6 99.95::9-113 GO:0005739::mitochondrion confident hh_1zjj_A_1::6-31,33-39,44-65,67-116 very confident psy7233 383 Q8CPW3::Protein NagD homolog ::::Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) confident COG0647::NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] 100.00::90-382 PF13344::Hydrolase_6 99.83::98-199 GO:0005829::cytosol confident hh_1vjr_A_1::91-174,176-202,225-250,252-271,273-354,364-382 very confident psy5227 693 A4SXQ0::NADH-quinone oxidoreductase subunit D ::NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.::Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) (taxid: 312153) very confident COG0649::NuoD NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion] 100.00::281-693 PF00346::Complex1_49kDa 100.00::396-693 GO:0005886::plasma membrane confident hh_3i9v_4_1::280-442,468-580,583-693 very confident psy7154 385 P93306::NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). Component of the iron-sulfur (IP) fragment of the enzyme.::Arabidopsis thaliana (taxid: 3702) confident COG0649::NuoD NADH:ubiquinone oxidoreductase 49 kD subunit 7 [Energy production and conversion] 100.00::30-318 PF00346::Complex1_49kDa 100.00::71-318 GO:0006979::response to oxidative stress confident hh_3i9v_4_1::30-318 very confident psy8249 232 Q5ZLV2::Peptidyl-prolyl cis-trans isomerase-like 3 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Gallus gallus (taxid: 9031) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::3-203 PF00160::Pro_isomerase 100.00::3-203 GO:0000413::protein peptidyl-prolyl isomerization confident hh_3rdd_A_1::2-59,109-126,128-187,189-205 very confident psy442 66 P25007::Peptidyl-prolyl cis-trans isomerase ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Drosophila melanogaster (taxid: 7227) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 99.91::1-65 PF00160::Pro_isomerase 99.89::1-64 GO:0003755::peptidyl-prolyl cis-trans isomerase activity very confident hh_3rdd_A_1::1-66 very confident psy3726 127 Q4WP12::Peptidyl-prolyl cis-trans isomerase B ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::6-127 PF00160::Pro_isomerase 100.00::2-127 GO:0003755::peptidyl-prolyl cis-trans isomerase activity very confident no hit no match psy443 403 Q9SKQ0::Peptidyl-prolyl cis-trans isomerase CYP19-2 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Arabidopsis thaliana (taxid: 3702) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::262-402 PF00160::Pro_isomerase 99.97::263-403 GO:0003755::peptidyl-prolyl cis-trans isomerase activity very confident hh_3rdd_A_1::256-403 very confident psy1145 138 P23284::Peptidyl-prolyl cis-trans isomerase B ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Homo sapiens (taxid: 9606) portable COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::2-136 PF00160::Pro_isomerase 100.00::1-135 GO:0005739::mitochondrion confident hh_3rdd_A_1::2-12,14-53,56-75,81-137 very confident psy13279 287 Q8W171::Peptidyl-prolyl cis-trans isomerase 1 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Glycine max (taxid: 3847) portable COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::4-270 PF00160::Pro_isomerase 99.95::6-270 GO:0005794::Golgi apparatus confident hh_3rdd_A_1::1-53,116-125,203-276,278-284 very confident psy1031 456 Q5E992::Peptidyl-prolyl cis-trans isomerase-like 1 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be involved in pre-mRNA splicing.::Bos taurus (taxid: 9913) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::359-453 PF00160::Pro_isomerase 99.94::370-452 GO:0005829::cytosol confident hh_2k7n_A_1::352-455 very confident psy17824 272 Q6BXZ7::Peptidyl-prolyl cis-trans isomerase D ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::13-175 PF00160::Pro_isomerase 100.00::9-174 GO:0005829::cytosol confident hh_2wfi_A_1::3-175 very confident psy7836 189 Q6UX04::Peptidyl-prolyl cis-trans isomerase CWC27 homolog ::PPIases accelerate the folding of proteins.::Homo sapiens (taxid: 9606) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::3-155 PF00160::Pro_isomerase 100.00::4-155 GO:0005829::cytosol confident hh_2hq6_A_1::2-155 very confident psy793 414 Q9CR16::Peptidyl-prolyl cis-trans isomerase D ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Mus musculus (taxid: 10090) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::20-221 PF00160::Pro_isomerase 100.00::14-222 GO:0005829::cytosol confident hh_3rdd_A_1::6-54,62-86,131-162,164-224 very confident psy17821 194 P63035::Cytohesin-2 ::Acts as a guanine-nucleotide exchange factor (GEF). Promotes guanine-nucleotide exchange on ARF1, ARF3 and ARF6. Promotes the activation of ARF factors through replacement of GDP with GTP. The cell membrane form, in association with ARL4 proteins, recruits ARF6 to the plasma membrane.::Rattus norvegicus (taxid: 10116) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 99.97::24-151 PF00160::Pro_isomerase 99.93::25-150 GO:0005923::tight junction confident hh_2wfi_A_1::20-151 very confident psy10327 289 A4FV72::Peptidyl-prolyl cis-trans isomerase E ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Combines RNA-binding and PPIase activities. May be involved in pre-mRNA splicing.::Bos taurus (taxid: 9913) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::179-289 PF00160::Pro_isomerase 99.93::1-126 GO:0016018::cyclosporin A binding confident hh_3rdd_A_1::162-289 very confident psy8675 92 O43447::Peptidyl-prolyl cis-trans isomerase H ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Participates in pre-mRNA splicing. May play a role in the assembly of the U4/U5/U6 tri-snRNP complex. May act as a chaperone.::Homo sapiens (taxid: 9606) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 99.88::27-88 PF00160::Pro_isomerase 99.79::20-89 GO:0016018::cyclosporin A binding confident hh_1z81_A_1::12-88 very confident psy5535 184 O43447::Peptidyl-prolyl cis-trans isomerase H ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Participates in pre-mRNA splicing. May play a role in the assembly of the U4/U5/U6 tri-snRNP complex. May act as a chaperone.::Homo sapiens (taxid: 9606) very confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::28-183 PF00160::Pro_isomerase 100.00::20-183 GO:0016018::cyclosporin A binding very confident hh_3rdd_A_1::8-60,66-98,100-166,168-184 very confident psy6102 426 P52009::Peptidyl-prolyl cis-trans isomerase 1 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Caenorhabditis elegans (taxid: 6239) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::21-262 PF00160::Pro_isomerase 99.94::14-273 GO:0016018::cyclosporin A binding confident hh_3rdd_A_1::7-54,62-108,114-116,131-136,140-140,148-149,152-162,170-172,174-177,239-274 very confident psy10359 249 P80311::Peptidyl-prolyl cis-trans isomerase B ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Bos taurus (taxid: 9913) very confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::48-198 PF00160::Pro_isomerase 100.00::41-198 GO:0016018::cyclosporin A binding confident hh_3ich_A_1::27-207 very confident psy11868 374 Q5NVL7::Peptidylprolyl isomerase domain and WD repeat-containing protein 1 ::Putative peptidylprolyl isomerase (PPIase). PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be involved in pre-mRNA splicing.::Pongo abelii (taxid: 9601) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::223-373 PF00160::Pro_isomerase 100.00::223-373 GO:0016018::cyclosporin A binding confident hh_2fu0_A_1::220-356,358-374 very confident psy15677 96 Q9CXG3::Peptidyl-prolyl cis-trans isomerase-like 4 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Mus musculus (taxid: 10090) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::1-95 PF00160::Pro_isomerase 99.89::1-95 GO:0016018::cyclosporin A binding confident hh_3k2c_A_1::1-22,30-36,38-68,70-95 very confident psy11623 74 P52018::Peptidyl-prolyl cis-trans isomerase 11 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Caenorhabditis elegans (taxid: 6239) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 99.90::7-71 PF00160::Pro_isomerase 99.82::2-70 GO:0043021::ribonucleoprotein complex binding confident hh_3rdd_A_1::1-39,45-72 very confident psy3664 504 Q9D787::Peptidyl-prolyl cis-trans isomerase-like 2 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Mus musculus (taxid: 10090) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::339-503 PF04641::Rtf2 100.00::29-177 GO:0000209::protein polyubiquitination confident hh_1zkc_A_1::339-341,344-379,387-414,440-504 very confident psy13629 395 P0CP84::Peptidyl-prolyl cis-trans isomerase-like 1 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 99.90::299-395 PF08450::SGL 99.62::109-300 GO:0043234::protein complex confident rp_1zkc_A_1::295-394 very confident psy14556 1181 Q9SKQ0::Peptidyl-prolyl cis-trans isomerase CYP19-2 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Arabidopsis thaliana (taxid: 3702) confident COG0652::PpiB Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones] 100.00::117-269 PF13281::DUF4071 100.00::426-615 GO:0003755::peptidyl-prolyl cis-trans isomerase activity very confident hh_3rdd_A_1::96-105,118-271 very confident psy2371 816 Q0AH18::Protein translocase subunit SecA ::Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.::Nitrosomonas eutropha (strain C91) (taxid: 335283) very confident COG0653::SecA Preprotein translocase subunit SecA (ATPase, RNA helicase) [Intracellular trafficking and secretion] 100.00::1-815 PF07517::SecA_DEAD 100.00::4-384 GO:0043952::protein transport by the Sec complex confident hh_2fsf_A_1::7-235,237-253,260-512,519-815 very confident psy9964 595 O01884::Probable ubiquinone biosynthesis monooxygenase coq-6 ::::Caenorhabditis elegans (taxid: 6239) confident COG0654::UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] 100.00::130-487 PF01494::FAD_binding_3 99.96::162-445 GO:0016787::hydrolase activity confident hh_2i7t_A_1::3-43,47-52,55-108 very confident psy4053 74 F1QWK4::Protein-methionine sulfoxide oxidase mical3b ::Monooxygenase that promotes depolymerization of F-actin by mediating oxidation of specific methionine residues on actin. Acts by modifying actin subunits through the addition of oxygen to form methionine-sulfoxide, leading to promote actin filament severing and prevent repolymerization. Involved in exocytic vesicles tethering and fusion: the monooxygenase activity is required for this process.::Danio rerio (taxid: 7955) confident COG0654::UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] 92.65::13-67 PF01494::FAD_binding_3 96.32::4-67 GO:0043195::terminal bouton confident hh_2bry_A_1::11-31,36-71 very confident psy12250 235 O15229::Kynurenine 3-monooxygenase ::Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid, a neurotoxic NMDA receptor antagonist and potential endogenous inhibitor of NMDA receptor signaling in axonal targeting, synaptogenesis and apoptosis during brain development. Quinolinic acid may also affect NMDA receptor signaling in pancreatic beta cells, osteoblasts, myocardial cells, and the gastrointestinal tract.::Homo sapiens (taxid: 9606) confident COG0654::UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] 99.84::15-180 PF01494::FAD_binding_3 99.78::74-153 GO:0050660::flavin adenine dinucleotide binding confident hh_2xdo_A_1::10-62,65-163 very confident psy9141 379 B2FL98::Kynurenine 3-monooxygenase ::Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.::Stenotrophomonas maltophilia (strain K279a) (taxid: 522373) portable COG0654::UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion] 100.00::6-350 PF01494::FAD_binding_3 99.96::7-164 GO:1901564::organonitrogen compound metabolic process confident hh_3c96_A_1::4-44,49-52,55-125,127-135,137-142,144-164 very confident psy15666 339 O14088::Uncharacterized oxidoreductase C2F3.05c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0656::ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] 100.00::84-338 PF00248::Aldo_ket_red 100.00::78-326 GO:0005829::cytosol confident hh_3o0k_A_1::81-93,96-120,125-144,146-172,181-184,186-201,204-243,245-326 very confident psy15066 62 O32210::Glyoxal reductase ::Reduces glyoxal and methylglyoxal. Is not involved in the vitamin B6 biosynthesis.::Bacillus subtilis (strain 168) (taxid: 224308) confident COG0656::ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] 99.71::2-55 PF00248::Aldo_ket_red 99.28::1-51 GO:0005829::cytosol confident hh_3o0k_A_1::1-51 very confident psy15050 323 P14550::Alcohol dehydrogenase [NADP(+)] ::Catalyzes the NADPH-dependent reduction of a variety of aromatic and aliphatic aldehydes to their corresponding alcohols. Catalyzes the reduction of mevaldate to mevalonic acid and of glyceraldehyde to glycerol. Has broad substrate specificity. In vitro substrates include succinic semialdehyde, 4-nitrobenzaldehyde, 1,2-naphthoquinone, methylglyoxal, and D-glucuronic acid. Plays a role in the activation of procarcinogens, such as polycyclic aromatic hydrocarbon trans-dihydrodiols, and in the metabolism of various xenobiotics and drugs, including the anthracyclines doxorubicin (DOX) and daunorubicin (DAUN).::Homo sapiens (taxid: 9606) confident COG0656::ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] 100.00::5-288 PF00248::Aldo_ket_red 100.00::19-283 GO:0006693::prostaglandin metabolic process confident hh_1s1p_A_1::1-3,5-286 very confident psy15065 773 P45376::Aldose reductase ::Catalyzes the NADPH-dependent reduction of a wide variety of carbonyl-containing compounds to their corresponding alcohols with a broad range of catalytic efficiencies.::Mus musculus (taxid: 10090) confident COG0656::ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only] 100.00::418-755 PF00248::Aldo_ket_red 100.00::431-750 GO:0055114::oxidation-reduction process confident hh_1s1p_A_1::417-533,577-773 very confident psy18113 542 Q86WA9::Sodium-independent sulfate anion transporter ::Exhibits sodium-independent sulfate anion transporter activity that may cooperate with SLC26A2 to mediate DIDS-sensitive sulfate uptake into high endothelial venules endothelial cells (HEVEC).::Homo sapiens (taxid: 9606) confident COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 100.00::8-542 PF00916::Sulfate_transp 100.00::117-416 GO:0005794::Golgi apparatus confident hh_3qe7_A_1::24-91,93-96,98-160,175-203,217-220,228-247,252-269,279-285,291-390,392-412 confident psy2735 475 Q86WA9::Sodium-independent sulfate anion transporter ::Exhibits sodium-independent sulfate anion transporter activity that may cooperate with SLC26A2 to mediate DIDS-sensitive sulfate uptake into high endothelial venules endothelial cells (HEVEC).::Homo sapiens (taxid: 9606) confident COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 100.00::59-465 PF00916::Sulfate_transp 99.97::168-420 GO:0043231::intracellular membrane-bounded organelle confident hh_3qe7_A_1::77-143,145-147,149-210,225-255,284-304,308-349,353-396,398-415 confident psy2503 79 Q80ZD3::Sodium-independent sulfate anion transporter ::Exhibits sodium-independent sulfate anion transporter activity that may cooperate with SLC26A2 to mediate DIDS-sensitive sulfate uptake into high endothelial venules endothelial cells (HEVEC).::Mus musculus (taxid: 10090) portable COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 99.40::1-78 PF00916::Sulfate_transp 99.20::1-53 GO:0044464::cell part confident hh_3qe7_A_1::14-31,33-47 portable psy2736 211 Q9URY8::Probable sulfate permease C869.05c ::High affinity uptake of sulfate into the cell.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 100.00::1-208 PF00916::Sulfate_transp 99.82::1-68 GO:0044464::cell part confident hh_3llo_A_1::107-210 confident psy5637 335 P71997::Probable sulfate transporter Rv1739c/MT1781 ::Expression in E.coli induces sulfate uptake during early-to mid-log phase growth. Uptake is maximal at pH 6.0, is sulfate-specific, requires E.coli CysA and the transmembrane segment but not the STAS domain of the protein.::Mycobacterium tuberculosis (taxid: 1773) portable COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 100.00::46-316 PF00916::Sulfate_transp 99.97::123-283 GO:0050801::ion homeostasis confident hh_3qe7_A_1::121-149,153-174,177-291,294-299 confident psy17802 332 P23348::Anion exchange protein 3 ::Plasma membrane anion exchange protein.::Rattus norvegicus (taxid: 10116) confident COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 95.28::64-240 PF00955::HCO3_cotransp 100.00::36-274 GO:0043229::intracellular organelle confident hh_1bh7_A_1::238-270 confident psy17800 389 P23348::Anion exchange protein 3 ::Plasma membrane anion exchange protein.::Rattus norvegicus (taxid: 10116) portable COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 97.74::169-375 PF00955::HCO3_cotransp 100.00::75-389 GO:0043229::intracellular organelle confident hh_1bzk_A_1::140-182 very confident psy16876 1124 O43395::U4/U6 small nuclear ribonucleoprotein Prp3 ::Participates in pre-mRNA splicing. May play a role in the assembly of the U4/U5/U6 tri-snRNP complex.::Homo sapiens (taxid: 9606) confident COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 100.00::469-991 PF08572::PRP3 100.00::183-395 GO:0015698::inorganic anion transport confident hh_3llo_A_1::876-992 very confident psy15561 75 Q86WA9::Sodium-independent sulfate anion transporter ::Exhibits sodium-independent sulfate anion transporter activity that may cooperate with SLC26A2 to mediate DIDS-sensitive sulfate uptake into high endothelial venules endothelial cells (HEVEC).::Homo sapiens (taxid: 9606) confident COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 99.59::13-70 PF13792::Sulfate_tra_GLY 99.87::18-70 GO:0005829::cytosol confident no hit no match psy14245 181 Q80ZD3::Sodium-independent sulfate anion transporter ::Exhibits sodium-independent sulfate anion transporter activity that may cooperate with SLC26A2 to mediate DIDS-sensitive sulfate uptake into high endothelial venules endothelial cells (HEVEC).::Mus musculus (taxid: 10090) confident COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 99.97::50-176 PF13792::Sulfate_tra_GLY 99.97::54-136 GO:0015116::sulfate transmembrane transporter activity confident hh_3qe7_A_1::67-133,135-137,139-172,174-175 portable psy6799 176 Q86WA9::Sodium-independent sulfate anion transporter ::Exhibits sodium-independent sulfate anion transporter activity that may cooperate with SLC26A2 to mediate DIDS-sensitive sulfate uptake into high endothelial venules endothelial cells (HEVEC).::Homo sapiens (taxid: 9606) confident COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 99.96::57-175 PF13792::Sulfate_tra_GLY 99.97::62-144 GO:0015116::sulfate transmembrane transporter activity confident hh_3qe7_A_1::75-141,143-145,147-172 portable psy5638 273 Q62273::Sulfate transporter ::Sulfate transporter. May play a role in endochondral bone formation.::Mus musculus (taxid: 10090) portable COG0659::SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism] 99.91::86-271 PF13792::Sulfate_tra_GLY 99.61::1-50 GO:0019532::oxalate transport confident hh_3qe7_A_1::112-151,153-155,157-157,191-248 portable psy12972 1578 Q80V03::Uncharacterized aarF domain-containing protein kinase 5 ::The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr).::Mus musculus (taxid: 10090) portable COG0661::AarF Predicted unusual protein kinase [General function prediction only] 100.00::284-667 PF03109::ABC1 99.94::393-509 GO:0005737::cytoplasm confident hh_3lz8_A_1::633-712,714-735 very confident psy16210 517 Q5BJQ0::Chaperone activity of bc1 complex-like, mitochondrial ::May be a chaperone-like protein essential for the proper conformation and functioning of protein complexes in the respiratory chain.::Rattus norvegicus (taxid: 10116) confident COG0661::AarF Predicted unusual protein kinase [General function prediction only] 100.00::269-515 PF03109::ABC1 99.96::332-448 GO:0005739::mitochondrion confident hh_2qol_A_1::348-383,420-432,438-441,444-487,489-515 confident psy14256 1046 Q5M7P6::Uncharacterized aarF domain-containing protein kinase 1 ::The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr).::Xenopus tropicalis (taxid: 8364) portable COG0661::AarF Predicted unusual protein kinase [General function prediction only] 100.00::178-578 PF03109::ABC1 99.93::241-357 GO:0005739::mitochondrion confident hh_2w4o_A_1::256-289,323-323,330-340,345-357,359-379,382-428,431-446 confident psy6118 660 Q5BJQ0::Chaperone activity of bc1 complex-like, mitochondrial ::May be a chaperone-like protein essential for the proper conformation and functioning of protein complexes in the respiratory chain.::Rattus norvegicus (taxid: 10116) confident COG0661::AarF Predicted unusual protein kinase [General function prediction only] 100.00::269-656 PF03109::ABC1 99.95::332-448 GO:0016021::integral to membrane confident hh_1u46_A_1::348-382,411-413,420-432,438-441,444-488,490-513,515-530 confident psy16211 340 Q6AY19::Uncharacterized aarF domain-containing protein kinase 4 ::The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr).::Rattus norvegicus (taxid: 10116) confident COG0661::AarF Predicted unusual protein kinase [General function prediction only] 100.00::1-338 PF03109::ABC1 99.97::12-128 GO:0016021::integral to membrane confident hh_2qol_A_1::27-63,100-112,117-117,119-168,170-193,195-211 confident psy4056 227 Q5ZMT7::Uncharacterized aarF domain-containing protein kinase 1 ::The function of this protein is not yet clear. It is not known if it has protein kinase activity and what type of substrate it would phosphorylate (Ser, Thr or Tyr).::Gallus gallus (taxid: 9031) confident COG0661::AarF Predicted unusual protein kinase [General function prediction only] 100.00::80-227 PF03109::ABC1 99.95::143-227 GO:0044434::chloroplast part confident hh_2y7j_A_1::79-114,116-190 confident psy12538 93 Q9V9J3::Tyrosine-protein kinase Src42A ::Essential for correct eye morphogenesis (ommatidial R7 neuron formation), this requires the Ras1/MAPK signal transduction pathway. May be involved in the regulation of cytoskeleton organization and cell-cell contacts in developing ommatidia.::Drosophila melanogaster (taxid: 7227) confident COG0661::AarF Predicted unusual protein kinase [General function prediction only] 93.59::59-89 PF07714::Pkinase_Tyr 96.69::56-88 GO:0046777::protein autophosphorylation confident rp_2h8h_A_1::45-91 very confident psy2215 172 Q9BTE1::Dynactin subunit 5 ::::Homo sapiens (taxid: 9606) confident COG0663::PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only] 99.69::68-164 PF14602::Hexapep_2 98.06::104-147 GO:0005813::centrosome confident hh_1v3w_A_1::68-80,83-147,151-163 confident psy8804 114 no hit no match COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.11::12-96 PF00027::cNMP_binding 98.67::36-95 GO:0005085::guanyl-nucleotide exchange factor activity confident hh_3cf6_E_1::2-95 very confident psy8820 234 Q6ZV29::Patatin-like phospholipase domain-containing protein 7 ::Serine hydrolase, whose specific chemical modification by certain organophosphorus (OP) compounds leads to distal axonopathy.::Homo sapiens (taxid: 9606) portable COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.68::107-215 PF00027::cNMP_binding 99.72::107-198 GO:0005789::endoplasmic reticulum membrane confident hh_4din_B_1::1-20,24-25,28-79,81-86,88-118,120-211 very confident psy5057 87 P31322::cAMP-dependent protein kinase type II-beta regulatory subunit ::Regulatory subunit of the cAMP-dependent protein kinases involved in cAMP signaling in cells. Type II regulatory chains mediate membrane association by binding to anchoring proteins, including the MAP2 kinase.::Bos taurus (taxid: 9913) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.79::2-86 PF00027::cNMP_binding 99.86::3-87 GO:0005829::cytosol confident hh_3tnp_B_1::1-86 very confident psy15589 155 Q6C2X0::cAMP-dependent protein kinase regulatory subunit ::::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) portable COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.57::12-143 PF00027::cNMP_binding 99.64::34-126 GO:0005829::cytosol confident hh_3cf6_E_1::7-27,30-41,49-105,107-143 very confident psy8545 547 Q9QWS8::Potassium voltage-gated channel subfamily H member 8 ::Pore-forming (alpha) subunit of voltage-gated potassium channel. Elicits a slowly activating, outward rectifying current. Channel properties may be modulated by cAMP and subunit assembly.::Rattus norvegicus (taxid: 10116) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.35::198-344 PF00027::cNMP_binding 99.35::219-323 GO:0005887::integral to plasma membrane confident hh_3ukn_A_1::119-264,266-274,292-346 very confident psy8133 99 P32023::cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 ::::Drosophila melanogaster (taxid: 7227) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.11::1-70 PF00027::cNMP_binding 99.21::1-61 GO:0009744::response to sucrose stimulus confident hh_3ocp_A_1::1-66 very confident psy12115 154 Q60603::Potassium voltage-gated channel subfamily H member 1 ::Pore-forming (alpha) subunit of voltage-gated non-inactivating delayed rectifier potassium channel. Channel properties may be modulated by cAMP and subunit assembly. Mediates IK(NI) current in myoblasts.::Mus musculus (taxid: 10090) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 97.93::1-66 PF00027::cNMP_binding 98.01::1-49 GO:0010389::regulation of G2/M transition of mitotic cell cycle confident hh_3ukn_A_1::1-69 very confident psy8827 82 Q6C2X0::cAMP-dependent protein kinase regulatory subunit ::::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.01::2-79 PF00027::cNMP_binding 99.04::2-49 GO:0030552::cAMP binding confident hh_3idb_B_1::2-57 very confident psy15967 280 Q90805::Cyclic nucleotide-gated channel cone photoreceptor subunit alpha ::Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cyclic GMP which leads to an opening of the cation channel and thereby causing a depolarization of cone photoreceptors.::Gallus gallus (taxid: 9031) portable COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.60::10-207 PF00027::cNMP_binding 99.48::14-152 GO:0043195::terminal bouton confident hh_3bpz_A_1::10-50,53-63,110-113,120-168 very confident psy1917 212 Q03042::cGMP-dependent protein kinase, isozyme 1 ::::Drosophila melanogaster (taxid: 7227) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.60::58-212 PF00027::cNMP_binding 99.58::81-212 GO:0043229::intracellular organelle confident hh_4din_B_1::17-34,36-212 very confident psy14742 66 Q03043::cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B ::::Drosophila melanogaster (taxid: 7227) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 98.84::3-56 PF00027::cNMP_binding 98.94::3-58 GO:0043234::protein complex confident hh_3ocp_A_1::3-58 very confident psy5056 182 Q26619::cAMP-dependent protein kinase type II regulatory subunit ::::Strongylocentrotus purpuratus (taxid: 7668) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 98.51::76-165 PF00027::cNMP_binding 98.30::86-165 GO:0043234::protein complex confident hh_3tnp_B_1::28-118,122-126,142-166 very confident psy7149 167 Q9Y4G8::Rap guanine nucleotide exchange factor 2 ::Guanine nucleotide exchange factor (GEF) for Rap1A, Rap1B and Rap2B GTPases. Does not interact with cAMP or cGMP.::Homo sapiens (taxid: 9606) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.66::61-167 PF00027::cNMP_binding 99.64::84-167 GO:0046582::Rap GTPase activator activity confident hh_2d93_A_1::44-86,88-167 very confident psy15517 472 O54852::Potassium voltage-gated channel subfamily H member 7 ::Pore-forming (alpha) subunit of voltage-gated potassium channel. Channel properties may be modulated by cAMP and subunit assembly.::Rattus norvegicus (taxid: 10116) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.51::267-404 PF00027::cNMP_binding 99.48::289-376 GO:0051291::protein heterooligomerization very confident hh_3ukn_A_1::189-266,268-389 very confident psy14740 362 P00516::cGMP-dependent protein kinase 1 ::Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.::Bos taurus (taxid: 9913) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.73::7-141 PF00069::Pkinase 99.92::151-356 GO:0009744::response to sucrose stimulus confident hh_4g3f_A_1::147-171,173-187,252-358 very confident psy1512 679 Q90805::Cyclic nucleotide-gated channel cone photoreceptor subunit alpha ::Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cyclic GMP which leads to an opening of the cation channel and thereby causing a depolarization of cone photoreceptors.::Gallus gallus (taxid: 9031) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 98.15::454-603 PF00520::Ion_trans 99.37::136-325 GO:0043204::perikaryon confident hh_3bpz_A_1::330-372,374-386,437-491,501-518,524-525,536-602 very confident psy11552 714 Q9EQZ6::Rap guanine nucleotide exchange factor 4 ::Guanine nucleotide exchange factor (GEF) for RAP1A, RAP1B and RAP2A small GTPases that is activated by binding cAMP. Seems not to activate RAB3A. Involved in cAMP-dependent, PKA-independent exocytosis through interaction with RIMS2.::Mus musculus (taxid: 10090) portable COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 98.68::306-392 PF00617::RasGEF 100.00::440-623 GO:0043234::protein complex confident hh_3cf6_E_1::443-462,467-637,672-714 very confident psy12113 369 Q5PQZ7::Blood vessel epicardial substance ::Cell adhesion molecule involved in the establishment and/or maintenance of cell integrity. May play a role in vamp3-mediated vesicular transport and recycling of receptor molecules. May be involved in the formation and regulation of the tight junction (TJ) paracellular permeability barrier in epithelial cells. May induce primordial adhesive contact and aggregation of epithelial cells in a Ca(2+)-independent manner. May be involved in epithelial movement during corneal sheet formation and regeneration. May play a role in the regulation of cell shape and movement by modulating the Rho-GTPase activity. May also be involved in striated muscle regeneration and in the regulation of cell spreading.::Danio rerio (taxid: 7955) confident COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.40::185-318 PF04831::Popeye 100.00::170-319 GO:0005923::tight junction confident hh_2z69_A_1::178-182,185-213,215-216,218-256,261-299,304-315 confident psy709 508 Q9ES83::Blood vessel epicardial substance ::Cell adhesion molecule involved in the establishment and/or maintenance of cell integrity. Involved in the formation and regulation of the tight junction (TJ) paracellular permeability barrier in epithelial cells. Plays a role in VAMP3-mediated vesicular transport and recycling of different receptor molecules through its interaction with VAMP3. Plays a role in the regulation of cell shape and movement by modulating the Rho-family GTPase activity through its interaction with ARHGEF25/GEFT. Induces primordial adhesive contact and aggregation of epithelial cells in a Ca(2+)-independent manner. Also involved in striated muscle regeneration and repair and in the regulation of cell spreading.::Mus musculus (taxid: 10090) portable COG0664::Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms] 99.43::175-335 PF04831::Popeye 100.00::161-304 GO:0007155::cell adhesion confident hh_3ukn_A_1::169-172,175-185,188-204,206-244,249-302 confident psy10285 673 Q5EA45::FAD-dependent oxidoreductase domain-containing protein 1 ::::Bos taurus (taxid: 9913) confident COG0665::DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] 100.00::243-665 PF01266::DAO 100.00::246-642 GO:0005739::mitochondrion confident hh_3axb_A_1::243-264,268-281,290-327,329-329,336-382,387-396,398-455,458-463,467-490,503-556,558-599,601-613,616-667 very confident psy1704 90 Q922Z0::D-aspartate oxidase ::Selectively catalyzes the oxidative deamination of D-aspartate and its N-methylated derivative, N-methyl D-aspartate.::Mus musculus (taxid: 10090) confident COG0665::DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] 98.84::26-77 PF01266::DAO 99.04::29-78 GO:0008445::D-aspartate oxidase activity confident hh_3g3e_A_1::29-48,51-78 very confident psy5260 142 O07727::Probable D-amino-acid oxidase ::::Mycobacterium tuberculosis (taxid: 1773) confident COG0665::DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] 99.85::3-134 PF01266::DAO 99.69::3-127 GO:0044710::single-organism metabolic process confident hh_3g3e_A_1::3-35,37-96,98-134 very confident psy5261 267 P14920::D-amino-acid oxidase ::Regulates the level of the neuromodulator D-serine in the brain. Has high activity towards D-DOPA and contributes to dopamine synthesis. Could act as a detoxifying agent which removes D-amino acids accumulated during aging. Acts on a variety of D-amino acids with a preference for those having small hydrophobic side chains followed by those bearing polar, aromatic, and basic groups. Does not act on acidic amino acids.::Homo sapiens (taxid: 9606) confident COG0665::DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] 99.92::53-258 PF01266::DAO 99.92::51-252 GO:0044710::single-organism metabolic process confident hh_3g3e_A_1::34-71,73-172,174-267 very confident psy1702 200 Q922Z0::D-aspartate oxidase ::Selectively catalyzes the oxidative deamination of D-aspartate and its N-methylated derivative, N-methyl D-aspartate.::Mus musculus (taxid: 10090) portable COG0665::DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] 99.75::27-193 PF01266::DAO 99.72::27-189 GO:0044710::single-organism metabolic process confident hh_3g3e_A_1::5-101,103-105,107-198 very confident psy16975 728 Q922Z0::D-aspartate oxidase ::Selectively catalyzes the oxidative deamination of D-aspartate and its N-methylated derivative, N-methyl D-aspartate.::Mus musculus (taxid: 10090) portable COG0665::DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism] 99.95::248-721 PF01266::DAO 99.96::252-604 GO:0048037::cofactor binding confident hh_3g3e_A_1::251-271,274-301,304-347,351-370,372-374,376-402,405-407,415-419,421-423,434-434,444-448,450-455,458-463,469-470,474-481,486-501,522-531,534-549,551-615,685-722 very confident psy8454 936 Q3UMR0::Ankyrin repeat domain-containing protein 27 ::May be a Rab21 guanine exchange factor and regulate endosome dynamics.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.47::801-931 PF02204::VPS9 99.82::299-404 GO:0005856::cytoskeleton confident hh_2f8y_A_1::804-837,839-864,866-932 very confident psy7030 377 P48994::Transient-receptor-potential-like protein ::A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Required for vision in the dark and in dim light. Binds calmodulin. Trp and trpl act together in the light response, although it is unclear whether as heteromultimers or distinct units. Also forms a functional cation channel with trp-gamma. Activated by fatty acids, metabolic stress, inositols and GTP-binding proteins.::Drosophila melanogaster (taxid: 7227) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.27::41-160 PF08016::PKD_channel 99.64::185-337 GO:0043234::protein complex confident hh_1ihb_A_1::40-62,68-87,89-134,136-162 very confident psy817 854 Q4UMH6::Putative ankyrin repeat protein RF_0381 ::::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.36::276-402 PF08016::PKD_channel 99.84::559-759 GO:0044464::cell part confident hh_2f8y_A_1::161-194,222-274,276-355,358-406 very confident psy2938 113 Q69ZR2::E3 ubiquitin-protein ligase HECTD1 ::Probable E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in development of the head mesenchyme and neural tube closure.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.35::12-111 PF12796::Ank_2 99.76::52-112 GO:0001843::neural tube closure confident hh_1awc_B_1::12-112 very confident psy3910 348 Q99728::BRCA1-associated RING domain protein 1 ::Probable E3 ubiquitin-protein ligase. The BRCA1-BARD1 heterodimer specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability. Plays a central role in the control of the cell cycle in response to DNA damage. Acts by mediating ubiquitin E3 ligase activity that is required for its tumor suppressor function. Also forms a heterodimer with CSTF1/CSTF-50 to modulate mRNA processing and RNAP II stability by inhibiting pre-mRNA 3' cleavage.::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.62::2-99 PF12796::Ank_2 99.82::14-103 GO:0005634::nucleus confident hh_2nte_A_1::120-140,143-144,148-156,158-167,171-213,219-219,223-249,253-297,300-344 very confident psy3911 348 Q99728::BRCA1-associated RING domain protein 1 ::Probable E3 ubiquitin-protein ligase. The BRCA1-BARD1 heterodimer specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain genomic stability. Plays a central role in the control of the cell cycle in response to DNA damage. Acts by mediating ubiquitin E3 ligase activity that is required for its tumor suppressor function. Also forms a heterodimer with CSTF1/CSTF-50 to modulate mRNA processing and RNAP II stability by inhibiting pre-mRNA 3' cleavage.::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.62::2-99 PF12796::Ank_2 99.82::14-103 GO:0005634::nucleus confident hh_2nte_A_1::120-140,143-144,148-156,158-167,171-213,219-219,223-249,253-297,300-344 very confident psy904 596 Q9VCA8::Ankyrin repeat and KH domain-containing protein mask ::Mediator of receptor tyrosine kinase (RTK) signaling, and may act either downstream of MAPK or transduce signaling through a parallel branch of the RTK pathway.::Drosophila melanogaster (taxid: 7227) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.51::208-337 PF12796::Ank_2 99.72::217-311 GO:0005730::nucleolus very confident hh_2f8y_A_1::122-141,143-175,177-241,244-342 very confident psy2733 644 Q54KA7::Ankyrin repeat, PH and SEC7 domain containing protein secG ::::Dictyostelium discoideum (taxid: 44689) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.42::166-287 PF12796::Ank_2 99.67::212-336 GO:0005737::cytoplasm confident hh_1n11_A_1::1-160,162-201,204-230,232-291 very confident psy11819 651 Q7T163::Kinase D-interacting substrate of 220 kDa ::Downstream target for both neurotrophin and ephrin receptors.::Danio rerio (taxid: 7955) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.52::495-616 PF12796::Ank_2 99.76::532-619 GO:0005737::cytoplasm confident hh_2f8y_A_1::407-619 very confident psy6358 1945 O35516::Neurogenic locus notch homolog protein 2 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). May play an essential role in postimplantation development, probably in some aspect of cell specification and/or differentiation. In collaboration with RELA/p65 enhances NFATc1 promoter activity and positively regulates RANKL-induced osteoclast differentiation.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 98.91::1822-1918 PF12796::Ank_2 99.39::1808-1923 GO:0005794::Golgi apparatus confident hh_3i08_A_1::1458-1623 very confident psy14202 356 A2A690::Protein TANC2 ::::Mus musculus (taxid: 10090) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.58::156-297 PF12796::Ank_2 99.78::247-338 GO:0005856::cytoskeleton confident hh_2f8y_A_1::105-125,127-197,213-297,300-340 very confident psy9957 251 O14974::Protein phosphatase 1 regulatory subunit 12A ::Key regulator of protein phosphatase 1C (PPP1C). Mediates binding to myosin. As part of the PPP1C complex, involved in dephosphorylation of PLK1. Capable of inhibiting HIF1AN-dependent suppression of HIF1A activity.::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.59::39-188 PF12796::Ank_2 99.79::47-161 GO:0005856::cytoskeleton confident hh_1s70_B_1::5-82,106-251 very confident psy5490 352 O75179::Ankyrin repeat domain-containing protein 17 ::Earliest specific in situ marker of hepatic differentiation during embryogenesis, useful for characterization of inductive events involved in hepatic specification (By similarity). Target of enterovirus 71 which is the major etiological agent of HFMD (hand, foot and mouth disease).::Homo sapiens (taxid: 9606) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.67::56-182 PF12796::Ank_2 99.82::30-124 GO:0005856::cytoskeleton confident hh_2f8y_A_1::2-52,55-123,125-186 very confident psy12892 315 Q01484::Ankyrin-2 ::Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.64::13-163 PF12796::Ank_2 99.81::24-138 GO:0005856::cytoskeleton confident hh_2f8y_A_1::1-84,107-163,165-223,225-231 very confident psy2356 529 Q01484::Ankyrin-2 ::Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.40::208-335 PF12796::Ank_2 99.72::217-309 GO:0005856::cytoskeleton confident hh_1n11_A_1::2-71,98-150,206-334,336-367,374-407,427-500,502-518 very confident psy8012 271 Q09YN0::Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 ::Plays a central role during spermatogenesis by repressing transposable elements and prevent their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons. Its association with pi-bodies suggests a participation in the primary piRNAs metabolic process. Required prior to the pachytene stage to facilitate the production of multiple types of piRNAs, including those associated with repeats involved in regulation of retrotransposons. May act by mediating protein-protein interactions during germ cell maturation.::Oryctolagus cuniculus (taxid: 9986) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.57::6-162 PF12796::Ank_2 99.76::78-168 GO:0005856::cytoskeleton confident hh_1n11_A_1::9-49,54-148,150-170,172-225,239-269 very confident psy14874 1015 Q12955::Ankyrin-3 ::Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.37::49-177 PF12796::Ank_2 99.62::25-116 GO:0005856::cytoskeleton confident hh_2f8y_A_1::381-466,493-523,541-570,572-639 very confident psy8898 1236 Q3UES3::Tankyrase-2 ::Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles (By similarity).$.::Mus musculus (taxid: 10090) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.29::667-797 PF12796::Ank_2 99.66::709-803 GO:0005856::cytoskeleton confident hh_1n11_A_1::12-75,107-148,209-283,403-421,423-433,436-466,471-471,544-581,677-715,719-797 very confident psy3308 838 Q4UMH6::Putative ankyrin repeat protein RF_0381 ::::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.46::671-796 PF12796::Ank_2 99.78::711-803 GO:0005856::cytoskeleton confident hh_1n11_A_1::324-391,451-550,568-796 very confident psy11230 553 Q4UMH6::Putative ankyrin repeat protein RF_0381 ::::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.57::404-536 PF12796::Ank_2 99.80::447-543 GO:0005856::cytoskeleton confident hh_2f8y_A_1::326-507,512-540 very confident psy13737 1388 Q4UMH6::Putative ankyrin repeat protein RF_0381 ::::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.44::1254-1380 PF12796::Ank_2 99.73::1294-1387 GO:0005856::cytoskeleton confident hh_1n11_A_2::869-939,984-1109,1123-1229,1254-1321,1323-1345 very confident psy8109 1011 Q54KA7::Ankyrin repeat, PH and SEC7 domain containing protein secG ::::Dictyostelium discoideum (taxid: 44689) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.41::747-878 PF12796::Ank_2 99.66::792-885 GO:0005856::cytoskeleton confident hh_2f8y_A_1::629-639,641-679,713-717,720-732,734-816,818-882 very confident psy2184 459 Q8BIZ1::Ankyrin repeat and sterile alpha motif domain-containing protein 1B ::Isoform 2 may participate in the regulation of nucleoplasmic coilin protein interactions in neuronal and transformed cells.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.45::14-158 PF12796::Ank_2 99.78::18-132 GO:0005856::cytoskeleton confident hh_2f8y_A_1::49-90,94-157,192-259,263-296 very confident psy903 739 Q9VCA8::Ankyrin repeat and KH domain-containing protein mask ::Mediator of receptor tyrosine kinase (RTK) signaling, and may act either downstream of MAPK or transduce signaling through a parallel branch of the RTK pathway.::Drosophila melanogaster (taxid: 7227) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.42::123-245 PF12796::Ank_2 99.73::160-253 GO:0005856::cytoskeleton confident hh_2f8y_A_1::9-65,67-74,133-188,190-283 very confident psy4998 318 Q12955::Ankyrin-3 ::Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.::Homo sapiens (taxid: 9606) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.62::151-278 PF12796::Ank_2 99.82::160-252 GO:0005923::tight junction confident hh_1n11_A_1::2-282,287-312 very confident psy12891 567 Q02357::Ankyrin-1 ::Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.::Mus musculus (taxid: 10090) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.54::420-555 PF12796::Ank_2 99.76::458-564 GO:0005929::cilium confident hh_2f8y_A_1::329-376,378-410,413-513,527-555,557-562 very confident psy7683 514 Q62415::Apoptosis-stimulating of p53 protein 1 ::Regulator that plays a central role in regulation of apoptosis via its interaction with p53/TP53. Regulates TP53 by enhancing the DNA binding and transactivation function of TP53 on the promoters of proapoptotic genes in vivo.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.59::306-438 PF12796::Ank_2 99.76::317-409 GO:0030296::protein tyrosine kinase activator activity confident hh_1ycs_B_1::282-306,310-419,421-512 very confident psy599 247 A7MB89::Protein fem-1 homolog C ::Probable component of an E3 ubiquitin-protein ligase complex, in which it may act as a substrate recognition subunit.::Bos taurus (taxid: 9913) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.66::104-230 PF12796::Ank_2 99.82::80-171 GO:0030307::positive regulation of cell growth confident hh_2f8y_A_1::30-56,66-235 very confident psy5702 235 Q54HW1::26S proteasome non-ATPase regulatory subunit 10 ::Acts as a chaperone during the assembly of the 26S proteasome, specifically of the 19S regulatory complex (RC).::Dictyostelium discoideum (taxid: 44689) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.65::52-206 PF12796::Ank_2 99.77::65-180 GO:0030307::positive regulation of cell growth confident hh_1n11_A_1::6-49,51-141,148-205,208-232 very confident psy8421 237 Q5ZM55::Protein fem-1 homolog B ::Component of an E3 ubiquitin-protein ligase complex, in which it may act as a substrate recognition subunit. Involved in apoptosis by acting as a death receptor-associated protein that mediates apoptosis.::Gallus gallus (taxid: 9031) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.62::58-190 PF12796::Ank_2 99.83::2-95 GO:0030307::positive regulation of cell growth confident hh_2f8y_A_1::8-74,77-142,145-213,216-223 very confident psy3899 923 Q6C520::Palmitoyltransferase AKR1 ::Palmitoyltransferase specific for casein kinase 1.::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.55::18-143 PF12796::Ank_2 99.72::23-115 GO:0031090::organelle membrane confident hh_1n11_A_1::6-17,19-97,99-117,119-167,173-182,306-308,476-493,525-577,579-656,658-677,679-725 very confident psy2859 534 Q3TPE9::Ankyrin repeat and MYND domain-containing protein 2 ::May be involved in the trafficking of signaling proteins to the cilia.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.54::7-130 PF12796::Ank_2 99.72::44-134 GO:0031323::regulation of cellular metabolic process confident hh_1wdy_A_1::7-28,30-68,70-193 very confident psy6441 464 Q6AI12::Ankyrin repeat domain-containing protein 40 ::::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.51::85-205 PF12796::Ank_2 99.73::91-185 GO:0031323::regulation of cellular metabolic process confident hh_2f8y_A_1::29-58,81-152,154-243 very confident psy14007 198 Q54HW1::26S proteasome non-ATPase regulatory subunit 10 ::Acts as a chaperone during the assembly of the 26S proteasome, specifically of the 19S regulatory complex (RC).::Dictyostelium discoideum (taxid: 44689) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.73::29-159 PF12796::Ank_2 99.89::6-98 GO:0031398::positive regulation of protein ubiquitination confident hh_3aji_A_1::1-123,126-195 very confident psy8420 199 Q5ZM55::Protein fem-1 homolog B ::Component of an E3 ubiquitin-protein ligase complex, in which it may act as a substrate recognition subunit. Involved in apoptosis by acting as a death receptor-associated protein that mediates apoptosis.::Gallus gallus (taxid: 9031) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.56::3-154 PF12796::Ank_2 99.76::9-133 GO:0031399::regulation of protein modification process confident hh_2y1l_E_1::3-17,27-57,73-108,117-157 very confident psy14144 100 B1AK53::Espin ::Multifunctional actin-bundling protein. Plays a major role in regulating the organization, dimensions, dynamics and signaling capacities of the actin filament-rich, microvillus-type specializations that mediate sensory transduction in variouS mechanosensory and chemosensory cells.::Homo sapiens (taxid: 9606) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.56::3-97 PF12796::Ank_2 99.73::18-97 GO:0031941::filamentous actin confident hh_1n11_A_1::3-34,36-96 very confident psy8766 135 Q7Z020::Transient receptor potential cation channel subfamily A member 1 ::Essential for thermotaxis by sensing environmental temperature. Receptor-activated non-selective cation channel involved in detection of sensations such as temperature. Involved in heat nociception by being activated by warm temperature of about 24-29 degrees Celsius.::Drosophila melanogaster (taxid: 7227) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.73::7-135 PF12796::Ank_2 99.87::17-123 GO:0033993::response to lipid confident hh_1ihb_A_1::2-22,24-67,75-78,86-134 very confident psy8763 641 Q7Z020::Transient receptor potential cation channel subfamily A member 1 ::Essential for thermotaxis by sensing environmental temperature. Receptor-activated non-selective cation channel involved in detection of sensations such as temperature. Involved in heat nociception by being activated by warm temperature of about 24-29 degrees Celsius.::Drosophila melanogaster (taxid: 7227) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.56::459-599 PF12796::Ank_2 99.76::469-573 GO:0034605::cellular response to heat confident hh_2f8y_A_1::9-19,21-56,59-89,102-138,147-211,217-251 very confident psy8764 420 Q7Z020::Transient receptor potential cation channel subfamily A member 1 ::Essential for thermotaxis by sensing environmental temperature. Receptor-activated non-selective cation channel involved in detection of sensations such as temperature. Involved in heat nociception by being activated by warm temperature of about 24-29 degrees Celsius.::Drosophila melanogaster (taxid: 7227) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 98.96::2-115 PF12796::Ank_2 99.49::2-83 GO:0034605::cellular response to heat confident hh_2b0o_E_1::3-16,18-81 confident psy6362 157 Q07008::Neurogenic locus notch homolog protein 1 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. May be important for follicular differentiation and possibly cell fate selection within the follicle. During cerebellar development, may function as a receptor for neuronal DNER and may be involved in the differentiation of Bergmann glia. Represses neuronal and myogenic differentiation. May enhance HIF1A function by sequestering HIF1AN away from HIF1A (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.::Rattus norvegicus (taxid: 10116) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.41::29-145 PF12796::Ank_2 99.73::55-152 GO:0043229::intracellular organelle confident hh_1yyh_A_2::26-95,105-112,114-156 very confident psy15068 710 Q4UMH6::Putative ankyrin repeat protein RF_0381 ::::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.50::48-185 PF12796::Ank_2 99.77::60-153 GO:0043229::intracellular organelle confident hh_1n11_A_1::78-80,82-167,174-193,195-222,258-310,359-410,424-434,436-454,456-485,545-594,596-615,617-641 very confident psy229 142 Q9UHJ6::Sedoheptulokinase ::::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 98.93::45-141 PF12796::Ank_2 99.68::50-137 GO:0043229::intracellular organelle confident hh_2l6b_A_1::43-142 very confident psy5573 338 Q5GIG6::Serine/threonine-protein kinase TNNI3K ::May play a role in cardiac physiology.::Mus musculus (taxid: 10090) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.59::10-145 PF12796::Ank_2 99.81::14-120 GO:0043231::intracellular membrane-bounded organelle confident hh_1n11_A_1::2-40,42-99,101-122,124-298,300-327 very confident psy138 321 Q06527::Ankyrin homolog ::::Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (taxid: 572477) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.66::93-264 PF12796::Ank_2 99.86::214-307 GO:0043232::intracellular non-membrane-bounded organelle confident hh_2f8y_A_1::76-174,187-264,266-304 very confident psy4236 208 Q9HYV6::Putative ankyrin repeat protein PA3287 ::::Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.54::85-207 PF12796::Ank_2 99.72::95-183 GO:0043232::intracellular non-membrane-bounded organelle confident hh_2y1l_E_1::27-54,84-116,119-122,124-208 very confident psy2185 136 A5PMU4::Ankyrin repeat and sterile alpha motif domain-containing protein 1B ::::Danio rerio (taxid: 7955) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.70::27-135 PF12796::Ank_2 99.92::33-132 GO:0043234::protein complex confident hh_1n11_A_1::7-12,14-88,96-135 very confident psy11714 272 O62852::Short transient receptor potential channel 5 ::Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion.::Oryctolagus cuniculus (taxid: 9986) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.41::100-262 PF12796::Ank_2 99.78::169-269 GO:0043234::protein complex confident hh_2f8y_A_1::33-58,65-126,159-218,234-268 very confident psy6445 134 Q4UMH6::Putative ankyrin repeat protein RF_0381 ::::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.79::2-124 PF12796::Ank_2 99.90::40-131 GO:0043234::protein complex confident hh_2f8y_A_1::2-134 very confident psy3338 152 Q53RE8::Ankyrin repeat domain-containing protein 39 ::::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.69::21-144 PF12796::Ank_2 99.86::58-150 GO:0043234::protein complex confident hh_1n0q_A_1::53-87,89-146 very confident psy15272 121 Q69ZR2::E3 ubiquitin-protein ligase HECTD1 ::Probable E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in development of the head mesenchyme and neural tube closure.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.64::6-114 PF12796::Ank_2 99.85::10-101 GO:0043234::protein complex confident hh_2f8y_A_1::5-24,26-114 very confident psy6300 185 Q6ZQK5::Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 ::GTPase-activating protein (GAP) for ADP ribosylation factor 6 (ARF6).::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.69::7-157 PF12796::Ank_2 99.86::70-164 GO:0043234::protein complex confident hh_1n11_A_1::2-58,60-95,98-184 very confident psy14140 207 Q54KA7::Ankyrin repeat, PH and SEC7 domain containing protein secG ::::Dictyostelium discoideum (taxid: 44689) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.50::75-195 PF12796::Ank_2 99.67::86-169 GO:0044092::negative regulation of molecular function confident hh_1n11_A_1::31-190,197-207 very confident psy9384 978 Q06527::Ankyrin homolog ::::Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (taxid: 572477) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.28::371-509 PF12796::Ank_2 99.61::347-441 GO:0044424::intracellular part confident hh_1n11_A_1::368-459,469-527,533-646,661-725,727-745,751-762,767-769,775-806 very confident psy4451 256 P48994::Transient-receptor-potential-like protein ::A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Required for vision in the dark and in dim light. Binds calmodulin. Trp and trpl act together in the light response, although it is unclear whether as heteromultimers or distinct units. Also forms a functional cation channel with trp-gamma. Activated by fatty acids, metabolic stress, inositols and GTP-binding proteins.::Drosophila melanogaster (taxid: 7227) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.14::5-117 PF12796::Ank_2 99.70::12-108 GO:0044425::membrane part confident hh_2pnn_A_2::3-30,32-117 very confident psy10604 225 G5E8K5::Ankyrin-3 ::Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.::Mus musculus (taxid: 10090) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.70::64-208 PF12796::Ank_2 99.85::72-183 GO:0044428::nuclear part confident hh_1n0r_A_1::67-98,100-133,152-199,201-211 very confident psy1036 399 Q86XL3::Ankyrin repeat and LEM domain-containing protein 2 ::::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.59::82-245 PF12796::Ank_2 99.75::90-219 GO:0044446::intracellular organelle part confident hh_2y1l_E_1::82-103,112-122,124-185,187-211,213-243 very confident psy4222 367 Q86XL3::Ankyrin repeat and LEM domain-containing protein 2 ::::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.50::141-295 PF12796::Ank_2 99.72::147-276 GO:0044446::intracellular organelle part confident hh_1ihb_A_1::143-159,168-177,179-194,196-242,244-268,270-294 very confident psy17862 265 Q5EA33::Ankyrin repeat domain-containing protein 49 ::::Bos taurus (taxid: 9913) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.62::128-254 PF12796::Ank_2 99.79::136-230 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_2f8y_A_1::48-73,75-92,106-211,213-221,223-257 very confident psy14474 550 Q9H1D0::Transient receptor potential cation channel subfamily V member 6 ::Calcium selective cation channel probably involved in Ca(2+) uptake in various tissues, including Ca(2+) reabsorption in intestine. The channel is activated by low internal calcium level, probably including intracellular calcium store depletion, and the current exhibits an inward rectification. Inactivation includes both, a rapid Ca(2+)-dependent and a slower Ca(2+)-calmodulin-dependent mechanism, the latter may be regulated by phosphorylation. In vitro, is slowly inhibited by Mg(2+) in a voltage-independent manner. Heteromeric assembly with TRPV5 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating.::Homo sapiens (taxid: 9606) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.60::166-318 PF12796::Ank_2 99.75::172-292 GO:0048060::negative gravitaxis confident hh_2rfa_A_1::41-65,75-75,118-137,141-203,216-282,286-320 very confident psy15728 139 Q9BXW6::Oxysterol-binding protein-related protein 1 ::Binds phospholipids; exhibits strong binding to phosphatidic acid and weak binding to phosphatidylinositol 3-phosphate (By similarity). Stabilizes GTP-bound RAB7A on late endosomes/lysosomes and alters functional properties of late endocytic compartments via its interaction with RAB7A.::Homo sapiens (taxid: 9606) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.25::42-137 PF12796::Ank_2 99.69::52-138 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_1n0q_A_1::48-75,86-138 very confident psy1719 73 Q95N27::Protein phosphatase 1 regulatory inhibitor subunit 16B ::Regulator of protein phosphatase 1 (PP1) that acts as a positive regulator of pulmonary endothelial cell (EC) barrier function. Involved in PKA-mediated moesin dephosphorylation which is important in EC barrier protection against thrombin stimulation. Promotes the interaction of PPP1CA with RPSA/LAMR1 and in turn facilitates the dephosphorylation of RPSA/LAMR1. Involved in the regulation of endothelial cell filopodia extension. May be a downstream target for TGF-beta1 signaling cascade in endothelial cells.::Bos taurus (taxid: 9913) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 98.06::31-73 PF13637::Ank_4 99.15::31-73 GO:0005634::nucleus confident hh_1n0q_A_2::31-59,61-73 confident psy9955 60 Q90623::Protein phosphatase 1 regulatory subunit 12A ::Regulates myosin phosphatase activity.::Gallus gallus (taxid: 9031) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 98.29::4-59 PF13637::Ank_4 99.23::22-60 GO:0007010::cytoskeleton organization confident hh_1s70_B_1::3-38,40-60 very confident psy14142 76 B1AK53::Espin ::Multifunctional actin-bundling protein. Plays a major role in regulating the organization, dimensions, dynamics and signaling capacities of the actin filament-rich, microvillus-type specializations that mediate sensory transduction in variouS mechanosensory and chemosensory cells.::Homo sapiens (taxid: 9606) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.45::3-72 PF13637::Ank_4 99.79::14-68 GO:0031941::filamentous actin very confident hh_1n11_A_1::3-34,36-72 very confident psy15934 70 D3YZU1::SH3 and multiple ankyrin repeat domains protein 1 ::Seems to be an adapter protein in the postsynaptic density (PSD) of excitatory synapses that interconnects receptors of the postsynaptic membrane including NMDA-type and metabotropic glutamate receptors, and the actin-based cytoskeleton. Plays a role in the structural and functional organization of the dendritic spine and synaptic junction. Overexpression promotes maturation of dendritic spines and the enlargement of spine heads via its ability to recruit Homer to postsynaptic sites, and enhances presynaptic function.::Mus musculus (taxid: 10090) confident COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 95.44::31-70 PF13637::Ank_4 98.32::34-69 GO:0044708::single-organism behavior confident hh_2y1l_E_1::27-60,62-69 confident psy12915 91 Q4UMH6::Putative ankyrin repeat protein RF_0381 ::::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) portable COG0666::Arp FOG: Ankyrin repeat [General function prediction only] 99.27::4-69 PF13857::Ank_5 99.77::13-67 GO:0005856::cytoskeleton confident hh_2y1l_E_1::2-69 very confident psy5380 129 P62482::Voltage-gated potassium channel subunit beta-2 ::Accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.::Mus musculus (taxid: 10090) confident COG0667::Tas Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) [Energy production and conversion] 99.92::1-124 PF00248::Aldo_ket_red 99.83::1-128 GO:0050802::circadian sleep/wake cycle, sleep confident hh_3eau_A_1::1-85,87-120,124-128 very confident psy2982 443 Q32P85::Dynein light chain roadblock-type 2 ::Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules.::Bos taurus (taxid: 9913) portable COG0670::Integral membrane protein, interacts with FtsH [General function prediction only] 99.90::4-217 PF01027::Bax1-I 99.72::7-215 GO:0005868::cytoplasmic dynein complex confident hh_3l7h_A_1::157-251 very confident psy17531 255 P55062::Bax inhibitor 1 ::Suppressor of apoptosis.::Rattus norvegicus (taxid: 10116) confident COG0670::Integral membrane protein, interacts with FtsH [General function prediction only] 99.97::69-240 PF01027::Bax1-I 99.93::73-240 GO:0032469::endoplasmic reticulum calcium ion homeostasis confident no hit no match psy15655 110 Q32L53::Protein lifeguard 1 ::Potential apoptotic regulator.::Bos taurus (taxid: 9913) confident COG0670::Integral membrane protein, interacts with FtsH [General function prediction only] 99.92::11-106 PF01027::Bax1-I 99.84::11-104 GO:0044446::intracellular organelle part confident no hit no match psy16008 236 Q8K097::Protein lifeguard 2 ::Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis. Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation. Plays a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.::Mus musculus (taxid: 10090) portable COG0670::Integral membrane protein, interacts with FtsH [General function prediction only] 99.97::2-232 PF01027::Bax1-I 99.97::2-230 GO:0044446::intracellular organelle part confident no hit no match psy3073 303 Q8K097::Protein lifeguard 2 ::Antiapoptotic protein which protects cells uniquely from Fas-induced apoptosis. Regulates Fas-mediated apoptosis in neurons by interfering with caspase-8 activation. Plays a role in cerebellar development by affecting cerebellar size, internal granular layer (IGL) thickness, and Purkinje cell (PC) development.::Mus musculus (taxid: 10090) confident COG0670::Integral membrane protein, interacts with FtsH [General function prediction only] 100.00::1-303 PF01027::Bax1-I 100.00::20-299 GO:0044446::intracellular organelle part confident rp_1vt4_I_1::54-75,78-107,111-127,129-134,136-149,153-241,250-288 portable psy15527 207 Q9HC24::Protein lifeguard 4 ::Anti-apoptotic protein which can inhibit apoptosis induced by intrinsic and extrinsic apoptotic stimuli. Can modulate both capacitative Ca2+ entry and inositol 1,4,5-trisphosphate (IP3)-mediated Ca2+ release.::Homo sapiens (taxid: 9606) confident COG0670::Integral membrane protein, interacts with FtsH [General function prediction only] 100.00::2-206 PF01027::Bax1-I 100.00::1-201 GO:0050848::regulation of calcium-mediated signaling confident no hit no match psy15426 251 P55062::Bax inhibitor 1 ::Suppressor of apoptosis.::Rattus norvegicus (taxid: 10116) confident COG0670::Integral membrane protein, interacts with FtsH [General function prediction only] 100.00::27-242 PF01027::Bax1-I 100.00::31-235 GO:0060702::negative regulation of endoribonuclease activity confident no hit no match psy15701 112 Q9JI99::Sphingosine-1-phosphate phosphatase 1 ::Has enzymatic activity against both sphingosine 1-phosphate (S1P) and dihydro-S1P. Regulates intracellular and extracellular S1P levels.::Mus musculus (taxid: 10090) confident COG0671::PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] 98.66::44-107 PF01569::PAP2 98.94::44-108 GO:0005794::Golgi apparatus confident hh_1d2t_A_1::6-30,32-107 confident psy17816 235 B0KWE9::Dolichyldiphosphatase 1 ::Required for efficient N-glycosylation. Necessary for maintaining optimal levels of dolichol-linked oligosaccharides. Hydrolyzes dolichyl pyrophosphate at a very high rate and dolichyl monophosphate at a much lower rate. Does not act on phosphatidate.::Callithrix jacchus (taxid: 9483) very confident COG0671::PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] 99.74::55-181 PF01569::PAP2 99.71::56-180 GO:0030176::integral to endoplasmic reticulum membrane very confident hh_1up8_A_1::90-103,106-175 confident psy4980 192 Q9V576::Putative phosphatidate phosphatase ::Responsible for guiding the germ cells early in the process of migration from the lumen of the developing gut towards the overlying mesoderm, where the germ cells enter the gonads. May be involved in lipid metabolism.::Drosophila melanogaster (taxid: 7227) portable COG0671::PgpB Membrane-associated phospholipid phosphatase [Lipid metabolism] 97.57::162-189 PF01569::PAP2 98.77::101-190 GO:0044464::cell part confident hh_1d2t_A_1::111-130,134-135,151-155,157-187 portable psy17993 191 Q03161::Glucose-6-phosphate 1-epimerase ::Catalyzes the interconversion between the alpha and beta anomers from at least three hexose 6-phosphate sugars (Glc6P, Gal6P, and Man6P).::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG0676::Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] 100.00::3-190 PF01263::Aldose_epim 99.93::11-191 GO:0007030::Golgi organization confident hh_2cir_A_1::11-55,57-92,94-125,127-191 very confident psy5401 109 O14313::Putative peroxiredoxin pmp20 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0678::AHP1 Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::2-109 PF00578::AhpC-TSA 99.41::3-90 GO:0005829::cytosol confident hh_3uma_A_1::4-109 very confident psy3466 103 P13679::Signal peptidase complex catalytic subunit SEC11C ::Component of the microsomal signal peptidase complex which removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum.::Canis familiaris (taxid: 9615) confident COG0681::LepB Signal peptidase I [Intracellular trafficking and secretion] 99.48::17-86 PF00717::Peptidase_S24 99.50::50-102 GO:0005789::endoplasmic reticulum membrane confident hh_1kca_A_1::48-71,74-88,90-102 confident psy15750 115 Q9V5E1::Peptidyl-alpha-hydroxyglycine alpha-amidating lyase 1 ::Probable lyase that catalyzes an essential reaction in C-terminal alpha-amidation of peptides. Mediates the dismutation of the unstable peptidyl(2-hydroxyglycine) intermediate to glyoxylate and the corresponding desglycine peptide amide. C-terminal amidation of peptides such as neuropeptides is essential for full biological activity.::Drosophila melanogaster (taxid: 7227) confident COG0681::LepB Signal peptidase I [Intracellular trafficking and secretion] 98.19::3-59 PF01436::NHL 99.16::77-104 GO:0005509::calcium ion binding confident hh_3fvz_A_1::17-110 very confident psy15749 164 Q6AZD4::Mitochondrial inner membrane protease subunit 2 ::Catalyzes the removal of transit peptides required for the targeting of proteins from the mitochondrial matrix, across the inner membrane, into the inter-membrane space.::Danio rerio (taxid: 7955) very confident COG0681::LepB Signal peptidase I [Intracellular trafficking and secretion] 99.69::2-146 PF10502::Peptidase_S26 99.88::59-140 GO:0005730::nucleolus very confident hh_1b12_A_1::18-40,45-147 very confident psy1666 981 P31423::Metabotropic glutamate receptor 4 ::Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate cyclase activity.::Rattus norvegicus (taxid: 10116) portable COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 96.20::72-328 PF00003::7tm_3 99.95::350-528 GO:0008066::glutamate receptor activity confident hh_3mq4_A_1::49-101,103-206,208-222,225-341,343-349 very confident psy8319 330 no hit no match COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 93.91::148-278 PF00003::7tm_3 99.55::117-329 GO:0097458::neuron part confident hh_4f11_A_2::148-181,183-279 confident psy8577 124 P18293::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Mus musculus (taxid: 10090) portable COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 98.18::5-95 PF01094::ANF_receptor 99.25::3-94 GO:0004383::guanylate cyclase activity confident hh_1dp4_A_1::3-112,114-117 very confident psy8570 159 P70180::Atrial natriuretic peptide receptor 3 ::Receptor for the natriuretic peptide hormones, binding with similar affinities atrial natriuretic peptide NPPA/ANP, brain natriuretic peptide NPPB/BNP, and C-type natriuretic peptide NPPC/CNP. May function as a clearance receptor for NPPA, NPPB and NPPC, regulating their local concentrations and effects. May regulate diuresis, blood pressure and skeletal development. Does not have guanylate cyclase activity.::Mus musculus (taxid: 10090) portable COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 98.82::12-155 PF01094::ANF_receptor 99.87::10-157 GO:0004383::guanylate cyclase activity confident hh_1dp4_A_1::12-96,100-119,121-127,129-131,134-157 very confident psy12591 144 Q54ET0::Metabotropic glutamate receptor-like protein E ::May be involved in early development in cAMP sensing and subsequent chemotactic response. Probable receptor of GABA and glutamate, leading respectively to the induction or inhibition of SDF-2 formation.::Dictyostelium discoideum (taxid: 44689) portable COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 99.33::1-110 PF01094::ANF_receptor 99.68::1-112 GO:0007200::phospholipase C-activating G-protein coupled receptor signaling pathway confident hh_3mq4_A_1::1-84,86-111 very confident psy17441 458 Q24418::Glutamate [NMDA] receptor subunit 1 ::NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors. Plays a role in associative learning and in long-term memory consolidation.::Drosophila melanogaster (taxid: 7227) confident COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 99.90::1-256 PF01094::ANF_receptor 99.97::2-258 GO:0008306::associative learning confident hh_3qek_A_1::2-9,11-12,14-57,59-277 very confident psy2801 126 Q03445::Glutamate receptor 1 ::Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists.::Drosophila melanogaster (taxid: 7227) confident COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 97.80::15-97 PF01094::ANF_receptor 99.60::7-113 GO:0008328::ionotropic glutamate receptor complex confident hh_3kg2_A_1::7-51,58-97,101-112 very confident psy13446 121 no hit no match COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 95.29::21-118 PF01094::ANF_receptor 99.34::19-107 GO:0016021::integral to membrane confident hh_3h6g_A_1::21-41,46-47,51-59,62-85,88-108 very confident psy17128 124 P42260::Glutamate receptor ionotropic, kainate 2 ::Ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. May be involved in the transmission of light information from the retina to the hypothalamus. Modulates cell surface expression of NETO2.::Rattus norvegicus (taxid: 10116) portable COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 98.18::3-123 PF01094::ANF_receptor 99.52::13-124 GO:0043195::terminal bouton confident hh_3h6g_A_1::8-18,20-88,107-123 very confident psy18065 149 P42260::Glutamate receptor ionotropic, kainate 2 ::Ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. May be involved in the transmission of light information from the retina to the hypothalamus. Modulates cell surface expression of NETO2.::Rattus norvegicus (taxid: 10116) portable COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 99.56::4-149 PF01094::ANF_receptor 99.88::4-149 GO:0043195::terminal bouton confident hh_3hsy_A_1::2-46,48-61,65-149 very confident psy16206 821 Q13003::Glutamate receptor ionotropic, kainate 3 ::Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds domoate > kainate >> L-glutamate = quisqualate >> AMPA = NMDA.::Homo sapiens (taxid: 9606) portable COG0683::LivK ABC-type branched-chain amino acid transport systems, periplasmic component [Amino acid transport and metabolism] 100.00::1-373 PF01094::ANF_receptor 100.00::14-370 GO:0043195::terminal bouton confident hh_3o21_A_1::1-30,32-96,98-100,105-116,120-157,165-229,234-280,283-354,356-389 very confident psy12817 1201 Q9SMZ4::Alpha-aminoadipic semialdehyde synthase ::Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-oxoglutarate reductase and saccharopine dehydrogenase activity, respectively. Negatively regulates free Lys accumulation in seeds.::Arabidopsis thaliana (taxid: 3702) confident COG0686::Ald Alanine dehydrogenase [Amino acid transport and metabolism] 100.00::3-438 PF03435::Saccharop_dh 100.00::568-1163 GO:0031060::regulation of histone methylation confident hh_1ff9_A_1::565-587,589-621,624-766,768-802,804-839,843-861,864-879,1050-1070,1072-1161 very confident psy15057 151 Q9CRA8::Exosome complex component RRP46 ::Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes.::Mus musculus (taxid: 10090) confident COG0689::Rph RNase PH [Translation, ribosomal structure and biogenesis] 100.00::1-151 PF01138::RNase_PH 100.00::3-123 GO:0005829::cytosol confident hh_2nn6_D_1::3-151 very confident psy18119 263 Q9NPD3::Exosome complex component RRP41 ::Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. EXOSC4 binds to ARE-containing RNAs.::Homo sapiens (taxid: 9606) very confident COG0689::Rph RNase PH [Translation, ribosomal structure and biogenesis] 100.00::4-230 PF01138::RNase_PH 99.97::20-150 GO:0005829::cytosol very confident hh_2nn6_B_1::1-6,9-240 very confident psy6508 477 Q9P7R3::Exosome complex component mtr3 ::Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and cryptic unstable transcripts (CUTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and in RNA surveillance pathways, preventing translation of aberrant mRNAs. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. ski6 is part of the hexameric ring of RNase PH domain-containing subunits proposed to form a central channel which threads RNA substrates for degradation.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0689::Rph RNase PH [Translation, ribosomal structure and biogenesis] 100.00::113-338 PF07714::Pkinase_Tyr 99.91::2-179 GO:0005634::nucleus confident hh_4aoj_A_1::2-15,18-115,117-161,163-179 very confident psy1153 195 Q8SY96::NFU1 iron-sulfur cluster scaffold homolog, mitochondrial ::Molecular scaffold for [Fe-S] cluster assembly of mitochondrial iron-sulfur proteins.::Drosophila melanogaster (taxid: 7227) confident COG0694::Thioredoxin-like proteins and domains [Posttranslational modification, protein turnover, chaperones] 99.95::118-195 PF01106::NifU 99.93::126-194 GO:0005829::cytosol confident hh_2z51_A_1::2-7,9-69,79-82,119-131,133-166,171-194 very confident psy1889 127 Q8LFQ6::Glutaredoxin-C4 ::Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.::Arabidopsis thaliana (taxid: 3702) confident COG0695::GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] 99.81::44-123 PF00462::Glutaredoxin 99.68::45-107 GO:0005794::Golgi apparatus very confident hh_3c1r_A_1::27-127 very confident psy3969 86 Q6GMK7::SH3 domain-binding glutamic acid-rich-like protein 2 ::::Danio rerio (taxid: 7955) confident COG0695::GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] 99.75::3-86 PF04908::SH3BGR 99.97::4-86 GO:0005737::cytoplasm confident hh_1t1v_A_1::1-41,44-58,67-86 very confident psy17234 170 Q9CWB7::Glutaredoxin-like protein C5orf63 homolog ::::Mus musculus (taxid: 10090) confident COG0695::GrxC Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones] 99.50::67-139 PF05768::DUF836 99.84::68-140 GO:0005739::mitochondrion confident hh_1wjk_A_1::64-144 very confident psy11593 400 Q93890::UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 ::Acts as a transporter of both UDP-galactose and UDP-N-acetylglucosamine into the Golgi lumen.::Caenorhabditis elegans (taxid: 6239) confident COG0697::RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] 99.82::75-386 PF04142::Nuc_sug_transp 100.00::144-376 GO:0005459::UDP-galactose transmembrane transporter activity confident hh_3b5d_A_1::159-230 portable psy10759 162 P87041::UDP-galactose transporter ::Essential for the transport of UDP-galactose into the lumen of Golgi apparatus.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0697::RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] 96.98::5-73 PF04142::Nuc_sug_transp 100.00::4-161 GO:0072334::UDP-galactose transmembrane transport confident hh_3b5d_A_1::2-32 portable psy16816 470 Q8R314::Solute carrier family 35 member F5 ::Putative solute transporter.::Mus musculus (taxid: 10090) confident COG0697::RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] 99.78::195-413 PF06027::DUF914 99.94::190-416 GO:0016020::membrane confident hh_3b5d_A_1::345-414 portable psy14361 223 Q8H184::Probable sugar phosphate/phosphate translocator At1g06470 ::::Arabidopsis thaliana (taxid: 3702) portable COG0697::RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] 98.37::65-170 PF08449::UAA 99.85::23-221 GO:0000138::Golgi trans cisterna confident hh_3b5d_A_1::71-117,121-140 portable psy3370 116 Q7Q5D4::Adenosine 3'-phospho 5'-phosphosulfate transporter 2 ::Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. Essential for viability. Involved in glycosaminoglycan synthesis and the subsequent signaling. May be involved in hh and dpp signaling by controlling the sulfation of heparan sulfate (HS).::Anopheles gambiae (taxid: 7165) confident COG0697::RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only] 95.50::60-115 PF08449::UAA 99.64::54-116 GO:0046964::3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity confident no hit no match psy8958 294 P58281::Dynamin-like 120 kDa protein, mitochondrial ::Dynamin-like 120 kDa protein, form S1: Inactive form produced by cleavage at S1 position by OMA1 following stress conditions that induce loss of mitochondrial membrane potential, leading to negative regulation of mitochondrial fusion.::Mus musculus (taxid: 10090) portable COG0699::Predicted GTPases (dynamin-related) [General function prediction only] 97.53::31-149 PF00350::Dynamin_N 99.46::1-148 GO:0005758::mitochondrial intermembrane space confident hh_2x2e_A_1::1-25,30-151,222-224,229-243,245-252,254-283 very confident psy3395 775 P27619::Dynamin ::Microtubule-associated force-producing protein which is involved in the production of microtubule bundles and which is able to bind and hydrolyze GTP. Implicated in endocytic protein sorting.::Drosophila melanogaster (taxid: 7227) very confident COG0699::Predicted GTPases (dynamin-related) [General function prediction only] 99.70::80-744 PF01031::Dynamin_M 100.00::222-507 GO:0003779::actin binding very confident hh_2x2e_A_1::3-204,209-231,233-236,239-348 very confident psy16470 197 B0VX73::Inactive rhomboid protein 1 ::Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.::Callithrix jacchus (taxid: 9483) portable COG0705::Membrane associated serine protease [Amino acid transport and metabolism] 99.59::2-128 PF01694::Rhomboid 99.44::2-127 GO:0005783::endoplasmic reticulum confident hh_2nr9_A_1::2-35,37-37,55-126 confident psy13894 191 Q76NQ1::Inactive rhomboid protein 1 ::Rhomboid protease-like protein which has no protease activity but regulates the secretion of several ligands of the epidermal growth factor receptor. Indirectly activates the epidermal growth factor receptor signaling pathway and may thereby regulate sleep, cell survival, proliferation and migration.::Drosophila melanogaster (taxid: 7227) confident COG0705::Membrane associated serine protease [Amino acid transport and metabolism] 99.93::10-177 PF01694::Rhomboid 99.91::20-174 GO:0005783::endoplasmic reticulum confident hh_2nr9_A_1::8-17,20-85,87-104,106-106,110-119,123-126,133-176 confident psy6649 242 Q8BHC7::Rhomboid-related protein 4 ::::Mus musculus (taxid: 10090) confident COG0705::Membrane associated serine protease [Amino acid transport and metabolism] 99.89::26-218 PF01694::Rhomboid 99.84::63-214 GO:0030176::integral to endoplasmic reticulum membrane confident hh_2xov_A_1::24-60,62-124,133-135,141-166,170-180,182-213 confident psy17558 317 A2AGA4::Rhomboid-related protein 2 ::Involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors. Known substrate: EFNB3.::Mus musculus (taxid: 10090) confident COG0705::Membrane associated serine protease [Amino acid transport and metabolism] 99.78::179-312 PF01694::Rhomboid 99.73::219-312 GO:0044464::cell part confident hh_2xov_A_1::176-182,184-201,208-284,286-308 very confident psy4504 219 O75783::Rhomboid-related protein 1 ::May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors.::Homo sapiens (taxid: 9606) portable COG0705::Membrane associated serine protease [Amino acid transport and metabolism] 99.59::35-183 PF01694::Rhomboid 99.28::34-180 GO:0044464::cell part confident hh_2xov_A_1::33-65,67-78,80-92,94-118,120-131,134-141,145-146,148-148,154-179 confident psy8269 386 Q9H300::Presenilins-associated rhomboid-like protein, mitochondrial ::Required for the control of apoptosis during postnatal growth. Essential for proteolytic processing of an antiapoptotic form of OPA1 which prevents the release of mitochondrial cytochrome c in response to intrinsic apoptoptic signals (By similarity). Promotes changes in mitochondria morphology regulated by phosphorylation of P-beta domain.::Homo sapiens (taxid: 9606) portable COG0705::Membrane associated serine protease [Amino acid transport and metabolism] 99.91::171-364 PF01694::Rhomboid 99.84::216-365 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_4g92_C_1::88-90,92-103,106-192 very confident psy15808 275 Q8BHC7::Rhomboid-related protein 4 ::::Mus musculus (taxid: 10090) confident COG0705::Membrane associated serine protease [Amino acid transport and metabolism] 99.88::27-217 PF04511::DER1 99.86::27-219 GO:0030176::integral to endoplasmic reticulum membrane confident hh_2xov_A_1::25-62,64-126,135-137,143-168,172-182,184-215 confident psy12564 1033 P45951::Apurinic endonuclease-redox protein ::Repairs oxidative DNA damages, seems also to act as a redox factor. Is multifunctional and may be involved both in DNA repair and in the regulation of transcription.::Arabidopsis thaliana (taxid: 3702) portable COG0708::XthA Exonuclease III [DNA replication, recombination, and repair] 100.00::735-1033 PF03372::Exo_endo_phos 99.64::738-823 GO:0016788::hydrolase activity, acting on ester bonds confident hh_2o3h_A_1::727-749,762-827,843-846,849-849,871-1033 very confident psy6130 295 P43138::DNA-(apurinic or apyrimidinic site) lyase ::Multifunctional protein that plays a central role in the cellular response to oxidative stress. The two major activities of APEX1 in DNA repair and redox regulation of transcriptional factors. Functions as a apurinic/apyrimidinic (AP) endodeoxyribonuclease in the DNA base excision repair (BER) pathway of DNA lesions induced by oxidative and alkylating agents. Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. Does also incise at AP sites in the DNA strand of DNA/RNA hybrids, single-stranded DNA regions of R-loop structures, and single-stranded RNA molecules. Has a 3'-5' exoribonuclease activity on mismatched deoxyribonucleotides at the 3' termini of nicked or gapped DNA molecules during short-patch BER. Possesses a DNA 3' phosphodiesterase activity capable of removing lesions (such as phosphoglycolate) blocking the 3' side of DNA strand breaks. May also play a role in the epigenetic regulation of gene expression by participating in DNA demethylation. Acts as a loading factor for POLB onto non-incised AP sites in DNA and stimulates the 5'-terminal deoxyribose 5'-phosphate (dRp) excision activity of POLB. Plays a role in the protection from granzymes-mediated cellular repair leading to cell death. Also involved in the DNA cleavage step of class switch recombination (CSR). On the other hand, APEX1 also exerts reversible nuclear redox activity to regulate DNA binding affinity and transcriptional activity of transcriptional factors by controlling the redox status of their DNA-binding domain, such as the FOS/JUN AP-1 complex after exposure to IR. Involved in calcium-dependent down-regulation of parathyroid hormone (PTH) expression by binding to negative calcium response elements (nCaREs). Together with HNRNPL or the dimer XRCC5/XRCC6, associates with nCaRE, acting as an activator of transcriptional repression. Stimulates the YBX1-mediated MDR1 promoter activity, when acetylated at Lys-6, leading to drug resistance. Acts also as an endoribonuclease involved in the control of single-stranded RNA metabolism. Plays a role in regulating MYC mRNA turnover by preferentially cleaving in between UA and CA dinucleotides of the MYC coding region determinant (CRD). In association with NMD1, plays a role in the rRNA quality control process during cell cycle progression. Associates, together with YBX1, on the MDR1 promoter. Together with NPM1, associates with rRNA. Binds DNA and RNA.::Rattus norvegicus (taxid: 10116) confident COG0708::XthA Exonuclease III [DNA replication, recombination, and repair] 100.00::73-294 PF03372::Exo_endo_phos 99.66::76-227 GO:0055114::oxidation-reduction process confident hh_2o3h_A_1::65-121,123-279,281-294 very confident psy6001 327 P43138::DNA-(apurinic or apyrimidinic site) lyase ::Multifunctional protein that plays a central role in the cellular response to oxidative stress. The two major activities of APEX1 in DNA repair and redox regulation of transcriptional factors. Functions as a apurinic/apyrimidinic (AP) endodeoxyribonuclease in the DNA base excision repair (BER) pathway of DNA lesions induced by oxidative and alkylating agents. Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. Does also incise at AP sites in the DNA strand of DNA/RNA hybrids, single-stranded DNA regions of R-loop structures, and single-stranded RNA molecules. Has a 3'-5' exoribonuclease activity on mismatched deoxyribonucleotides at the 3' termini of nicked or gapped DNA molecules during short-patch BER. Possesses a DNA 3' phosphodiesterase activity capable of removing lesions (such as phosphoglycolate) blocking the 3' side of DNA strand breaks. May also play a role in the epigenetic regulation of gene expression by participating in DNA demethylation. Acts as a loading factor for POLB onto non-incised AP sites in DNA and stimulates the 5'-terminal deoxyribose 5'-phosphate (dRp) excision activity of POLB. Plays a role in the protection from granzymes-mediated cellular repair leading to cell death. Also involved in the DNA cleavage step of class switch recombination (CSR). On the other hand, APEX1 also exerts reversible nuclear redox activity to regulate DNA binding affinity and transcriptional activity of transcriptional factors by controlling the redox status of their DNA-binding domain, such as the FOS/JUN AP-1 complex after exposure to IR. Involved in calcium-dependent down-regulation of parathyroid hormone (PTH) expression by binding to negative calcium response elements (nCaREs). Together with HNRNPL or the dimer XRCC5/XRCC6, associates with nCaRE, acting as an activator of transcriptional repression. Stimulates the YBX1-mediated MDR1 promoter activity, when acetylated at Lys-6, leading to drug resistance. Acts also as an endoribonuclease involved in the control of single-stranded RNA metabolism. Plays a role in regulating MYC mRNA turnover by preferentially cleaving in between UA and CA dinucleotides of the MYC coding region determinant (CRD). In association with NMD1, plays a role in the rRNA quality control process during cell cycle progression. Associates, together with YBX1, on the MDR1 promoter. Together with NPM1, associates with rRNA. Binds DNA and RNA.::Rattus norvegicus (taxid: 10116) confident COG0708::XthA Exonuclease III [DNA replication, recombination, and repair] 100.00::72-327 PF03372::Exo_endo_phos 99.79::75-226 GO:0055114::oxidation-reduction process confident hh_2o3h_A_1::71-89,91-121,123-205,207-279,281-327 very confident psy2889 163 A0K2X9::ATP synthase subunit b ::Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0).::Burkholderia cenocepacia (strain HI2424) (taxid: 331272) confident COG0711::AtpF F0F1-type ATP synthase, subunit b [Energy production and conversion] 100.00::9-163 PF00430::ATP-synt_B 99.97::13-144 GO:0031225::anchored to membrane confident hh_1b9u_A_1::9-41 confident psy4192 317 Q07UZ2::ATP synthase subunit delta ::This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction.::Rhodopseudomonas palustris (strain BisA53) (taxid: 316055) portable COG0712::AtpH F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion] 100.00::25-185 PF00213::OSCP 99.97::30-185 GO:0005739::mitochondrion confident hh_2wss_S_1::19-175,177-188 very confident psy9749 148 Q24439::ATP synthase subunit O, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain and the peripheric stalk, which acts as a stator to hold the catalytic alpha(3)beta(3) subcomplex and subunit a/ATP6 static relative to the rotary elements.::Drosophila melanogaster (taxid: 7227) confident COG0712::AtpH F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) [Energy production and conversion] 100.00::1-145 PF00213::OSCP 100.00::2-144 GO:0016887::ATPase activity confident hh_2wss_S_1::2-4,6-147 very confident psy9404 188 A0K9K6::Deoxycytidine triphosphate deaminase ::::Burkholderia cenocepacia (strain HI2424) (taxid: 331272) very confident COG0717::Dcd Deoxycytidine deaminase [Nucleotide transport and metabolism] 100.00::2-188 PF06559::DCD 99.97::2-164 GO:0006253::dCTP catabolic process confident hh_4dhk_A_1::1-188 very confident psy16342 143 Q1ZXI0::6-pyruvoyl tetrahydrobiopterin synthase ::Involved in the biosynthesis of tetrahydrobiopterin, an essential cofactor of aromatic amino acid hydroxylases. Catalyzes the transformation of 7,8-dihydroneopterin triphosphate into 6-pyruvoyl tetrahydropterin.::Dictyostelium discoideum (taxid: 44689) very confident COG0720::6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism] 100.00::8-142 PF01242::PTPS 100.00::10-143 GO:0006728::pteridine biosynthetic process very confident hh_2g64_A_1::6-78,80-143 very confident psy11691 271 F1QWK4::Protein-methionine sulfoxide oxidase mical3b ::Monooxygenase that promotes depolymerization of F-actin by mediating oxidation of specific methionine residues on actin. Acts by modifying actin subunits through the addition of oxygen to form methionine-sulfoxide, leading to promote actin filament severing and prevent repolymerization. Involved in exocytic vesicles tethering and fusion: the monooxygenase activity is required for this process.::Danio rerio (taxid: 7955) portable COG0722::AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism] 98.73::182-237 PF00412::LIM 99.37::98-155 GO:0044424::intracellular part confident hh_1rut_X_1::91-140,142-192 very confident psy17358 202 Q9CR68::Cytochrome b-c1 complex subunit Rieske, mitochondrial ::The transit peptide of the Rieske protein seems to form part of the bc1 complex and is considered to be the subunit 11/IX of that complex.::Mus musculus (taxid: 10090) very confident COG0723::QcrA Rieske Fe-S protein [Energy production and conversion] 99.97::33-202 PF00355::Rieske 99.88::83-196 GO:0005750::mitochondrial respiratory chain complex III very confident hh_1rie_A_1::76-202 very confident psy6642 292 Q9CR68::Cytochrome b-c1 complex subunit Rieske, mitochondrial ::The transit peptide of the Rieske protein seems to form part of the bc1 complex and is considered to be the subunit 11/IX of that complex.::Mus musculus (taxid: 10090) confident COG0723::QcrA Rieske Fe-S protein [Energy production and conversion] 99.95::27-192 PF00355::Rieske 99.82::75-188 GO:0005750::mitochondrial respiratory chain complex III very confident hh_1pp9_E_1::3-192 very confident psy6962 88 Q5R995::CUGBP Elav-like family member 1 ::RNA-binding protein implicated in the regulation of several post-transcriptional events. Involved in pre-mRNA alternative splicing, mRNA translation and stability. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of cardiac isoforms of TNNT2 during heart remodeling at the juvenile to adult transition. Acts as both an activator and repressor of a pair of coregulated exons: promotes inclusion of the smooth muscle (SM) exon but exclusion of the non-muscle (NM) exon in actinin pre-mRNAs. Activates SM exon 5 inclusion by antagonizing the repressive effect of PTB. Promotes exclusion of exon 11 of the INSR pre-mRNA. Inhibits, together with HNRNPH1, insulin receptor (IR) pre-mRNA exon 11 inclusion in myoblast. Increases translation and controls the choice of translation initiation codon of CEBPB mRNA. Increases mRNA translation of CEBPB in aging liver. Increases translation of CDKN1A mRNA by antagonizing the repressive effect of CALR3. Mediates rapid cytoplasmic mRNA deadenylation. Recruits the deadenylase PARN to the poly(A) tail of EDEN-containing mRNAs to promote their deadenylation. Required for completion of spermatogenesis. Binds to (CUG)n triplet repeats in the 3'-UTR of transcripts such as DMPK and to Bruno response elements (BREs). Binds to muscle-specific splicing enhancer (MSE) intronic sites flanking the alternative exon 5 of TNNT2 pre-mRNA. Binds to AU-rich sequences (AREs or EDEN-like) localized in the 3'-UTR of JUN and FOS mRNAs. Binds to the IR RNA. Binds to the 5'-region of CDKN1A and CEBPB mRNAs. Binds with the 5'-region of CEBPB mRNA in aging liver.::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.44::28-87 PF00076::RRM_1 99.66::31-87 GO:0000381::regulation of alternative mRNA splicing, via spliceosome confident hh_3nmr_A_1::27-87 very confident psy13066 115 P07909::Heterogeneous nuclear ribonucleoprotein A1 ::This protein is a component of ribonucleosomes.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.56::16-94 PF00076::RRM_1 99.74::19-88 GO:0000785::chromatin confident hh_1l3k_A_1::8-113 very confident psy40 168 Q5RBU8::Heterogeneous nuclear ribonucleoproteins A2/B1 ::Involved with pre-mRNA processing. Forms complexes (ribonucleosomes) with at least 20 other different hnRNP and heterogeneous nuclear RNA in the nucleous.::Pongo abelii (taxid: 9601) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.60::86-161 PF00076::RRM_1 99.78::89-156 GO:0000785::chromatin confident hh_1l3k_A_1::8-55,57-166 very confident psy15852 661 Q5ZI72::Heterogeneous nuclear ribonucleoprotein D-like ::Acts as a transcriptional regulator. Binds DNA and RNA.::Gallus gallus (taxid: 9031) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.18::100-234 PF00076::RRM_1 99.38::596-658 GO:0000785::chromatin confident no hit no match psy1757 348 Q8K3P4::RNA-binding protein Musashi homolog 1 ::RNA binding protein that regulates the expression of target mRNAs at the translation level. Regulates expression of the NOTCH1 antagonist NUMB. Binds RNA containing the sequence 5'-GUUAGUUAGUUAGUU-3' and other sequences containing the pattern 5'-[GA]U(1-3)AGU-3'. May play a role in the proliferation and maintenance of stem cells in the central nervous system.::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.55::16-159 PF00076::RRM_1 99.57::19-88 GO:0000785::chromatin confident hh_1l3k_A_1::9-184 very confident psy1314 275 Q8K3P4::RNA-binding protein Musashi homolog 1 ::RNA binding protein that regulates the expression of target mRNAs at the translation level. Regulates expression of the NOTCH1 antagonist NUMB. Binds RNA containing the sequence 5'-GUUAGUUAGUUAGUU-3' and other sequences containing the pattern 5'-[GA]U(1-3)AGU-3'. May play a role in the proliferation and maintenance of stem cells in the central nervous system.::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.60::16-139 PF00076::RRM_1 99.63::19-88 GO:0000785::chromatin confident hh_1l3k_A_1::8-185 very confident psy6490 398 Q8K3P4::RNA-binding protein Musashi homolog 1 ::RNA binding protein that regulates the expression of target mRNAs at the translation level. Regulates expression of the NOTCH1 antagonist NUMB. Binds RNA containing the sequence 5'-GUUAGUUAGUUAGUU-3' and other sequences containing the pattern 5'-[GA]U(1-3)AGU-3'. May play a role in the proliferation and maintenance of stem cells in the central nervous system.::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.57::161-286 PF00076::RRM_1 99.65::252-321 GO:0000785::chromatin confident hh_2cjk_A_1::160-222,224-241,245-328 very confident psy8001 172 Q5NVH8::Cleavage and polyadenylation specificity factor subunit 6 ::Component of the cleavage factor Im complex (CFIm) that plays a key role in pre-mRNA 3'-processing. Involved in association with NUDT21/CPSF5 in pre-MRNA 3'-end poly(A) site cleavage and poly(A) addition. CPSF6 binds to cleavage and polyadenylation RNA substrates and promotes RNA looping.::Pongo abelii (taxid: 9601) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.56::70-150 PF00076::RRM_1 99.74::73-145 GO:0003676::nucleic acid binding confident hh_3n9u_C_1::68-168 very confident psy1534 587 Q9P3U1::Uncharacterized RNA-binding protein C328.05 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.47::32-217 PF00076::RRM_1 99.59::35-103 GO:0003676::nucleic acid binding confident hh_1l3k_A_1::28-91,93-115,153-219,221-241 very confident psy222 225 Q16560::U11/U12 small nuclear ribonucleoprotein 35 kDa protein ::::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.51::90-168 PF00076::RRM_1 99.71::93-163 GO:0003690::double-stranded DNA binding confident hh_3pgw_S_1::86-187 very confident psy14193 239 Q75BJ7::Nucleolar protein 12 ::Involved in pre-25S rRNA processing.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.35::138-215 PF00076::RRM_1 99.66::141-211 GO:0003690::double-stranded DNA binding confident hh_1l3k_A_1::22-38,53-68,86-199,201-215 very confident psy3698 534 P0C279::Cytoplasmic polyadenylation element-binding protein 1 ::Sequence-specific RNA-binding protein that regulates mRNA cytoplasmic polyadenylation and translation initiation during oocyte maturation, early development and at postsynapse sites of neurons. Binds to the cytoplasmic polyadenylation element (CPE), an uridine-rich sequence element (consensus sequence 5'-UUUUUAU-3') within the 3'-UTR of mRNAs. In absence of phosphorylation and in association with TACC3 is also involved as a repressor of translation of CPE-containing mRNA; a repression that is relieved by phosphorylation or degradation. Involved in the transport of CPE-containing mRNA to dendrites; those mRNAs may be transported to dendrites in a translationally dormant form and translationally activated at synapses. Its interaction with APLP1 promotes local CPE-containing mRNA polyadenylation and translation activation. Induces the assembly of stress granules in the absence of stress.::Rattus norvegicus (taxid: 10116) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.41::24-177 PF00076::RRM_1 99.27::121-181 GO:0003723::RNA binding confident hh_2cjk_A_1::23-63,65-84,86-100,111-139,141-185 very confident psy15515 242 Q24207::Protein boule ::RNA-binding protein that plays a central role in spermatogenesis. Required for meiotic entry and germline differentiation, at the transition between G2 and M phases of meiosis I. Acts by regulating translation of specific mRNAs, possibly by binding to their 3'-UTR. Essential for translation of twine (twe) mRNA. Required for the expression of various genes such as CG6784, CG17210, CG15841 scpr-B, scpr-C, and rho-6.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.49::43-121 PF00076::RRM_1 99.71::46-115 GO:0003723::RNA binding confident rp_2fy1_A_1::43-151 very confident psy882 253 Q8CFD1::RNA-binding protein 45 ::RNA-binding protein with binding specificity for poly(C). May play an important role in neural development.::Rattus norvegicus (taxid: 10116) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.32::22-101 PF00076::RRM_1 99.60::25-96 GO:0003729::mRNA binding confident hh_2cjk_A_1::21-82,85-88,91-130,132-137,139-150 very confident psy17274 184 Q9Z118::Polypyrimidine tract-binding protein 3 ::RNA-binding protein that mediates pre-mRNA alternative splicing regulation. Plays a role in the regulation of cell proliferation, differentiation and migration. Positive regulator of EPO-dependent erythropoiesis. Participates in cell differentiation regulation by repressing tissue-specific exons. Promotes Fas exon 6 skipping. Binds RNA, preferentially to both poly(G) and poly(U).::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.38::100-175 PF00076::RRM_1 99.74::103-170 GO:0003730::mRNA 3'-UTR binding confident hh_1qm9_A_1::1-165,167-178 very confident psy11527 206 O74452::Cell wall integrity protein scw1 ::Acts as a negative regulator of cell wall and septum deposition.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.36::105-182 PF00076::RRM_1 99.64::108-177 GO:0005634::nucleus confident hh_2dgu_A_1::102-139,144-170,174-188 very confident psy7530 60 Q8K3P4::RNA-binding protein Musashi homolog 1 ::RNA binding protein that regulates the expression of target mRNAs at the translation level. Regulates expression of the NOTCH1 antagonist NUMB. Binds RNA containing the sequence 5'-GUUAGUUAGUUAGUU-3' and other sequences containing the pattern 5'-[GA]U(1-3)AGU-3'. May play a role in the proliferation and maintenance of stem cells in the central nervous system.::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.84::14-60 PF00076::RRM_1 99.16::17-49 GO:0005634::nucleus confident hh_2mss_A_1::16-50,52-60 very confident psy1680 227 Q9WUK2::Eukaryotic translation initiation factor 4H ::Stimulates the RNA helicase activity of EIF4A in the translation initiation complex. Binds weakly mRNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.57::13-222 PF00076::RRM_1 99.65::158-227 GO:0005634::nucleus confident no hit no match psy3343 274 Q75A83::Multiple RNA-binding domain-containing protein 1 ::Involved in pre-rRNA processing.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.49::96-265 PF00076::RRM_1 99.56::99-163 GO:0005654::nucleoplasm confident rp_1whx_A_1::88-195 very confident psy7051 158 Q6PDU1::Serine/arginine-rich splicing factor 2 ::Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. The phosphorylated form (by SRPK2) is required for cellular apoptosis in response to cisplatin treatment.::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.61::13-91 PF00076::RRM_1 99.79::16-86 GO:0005681::spliceosomal complex confident hh_2kn4_A_1::11-96 very confident psy2160 773 O43719::HIV Tat-specific factor 1 ::Functions as a general transcription factor playing a role in the process of transcriptional elongation. May mediate the reciprocal stimulatory effect of splicing on transcriptional elongation. In case of infection by HIV-1, it is up-regulated by the HIV-1 proteins NEF and gp120, acts as a cofactor required for the Tat-enhanced transcription of the virus.::Homo sapiens (taxid: 9606) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.22::500-705 PF00076::RRM_1 99.45::218-296 GO:0005730::nucleolus confident rp_2dit_A_1::344-445 very confident psy2141 173 Q5R469::Poly(U)-binding-splicing factor PUF60 ::DNA- and RNA-binding protein, involved in several nuclear processes such as pre-mRNA splicing, apoptosis and transcription regulation. In association with FUBP1 regulates MYC transcription at the P2 promoter through the core-TFIIH basal transcription factor. Acts as a transcriptional repressor through the core-TFIIH basal transcription factor. Represses FUBP1-induced transcriptional activation but not basal transcription. Decreases ERCC3 helicase activity. Is also involved in pre-mRNA splicing. Promotes splicing of an intron with weak 3'-splice site and pyrimidine tract in a cooperative manner with U2AF2. Involved in apoptosis induction when overexpressed in HeLa cells. Modulates alternative splicing of several mRNAs. Binds to relaxed DNA of active promoter regions. Binds to the pyrimidine tract and 3'-splice site regions of pre-mRNA; binding is enhanced in presence of U2AF2. Binds to Y5 RNA in association with TROVE2. Binds to poly(U) RNA.::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.56::32-110 PF00076::RRM_1 99.74::35-105 GO:0005730::nucleolus confident hh_2qfj_A_1::1-118 very confident psy2136 166 Q5R469::Poly(U)-binding-splicing factor PUF60 ::DNA- and RNA-binding protein, involved in several nuclear processes such as pre-mRNA splicing, apoptosis and transcription regulation. In association with FUBP1 regulates MYC transcription at the P2 promoter through the core-TFIIH basal transcription factor. Acts as a transcriptional repressor through the core-TFIIH basal transcription factor. Represses FUBP1-induced transcriptional activation but not basal transcription. Decreases ERCC3 helicase activity. Is also involved in pre-mRNA splicing. Promotes splicing of an intron with weak 3'-splice site and pyrimidine tract in a cooperative manner with U2AF2. Involved in apoptosis induction when overexpressed in HeLa cells. Modulates alternative splicing of several mRNAs. Binds to relaxed DNA of active promoter regions. Binds to the pyrimidine tract and 3'-splice site regions of pre-mRNA; binding is enhanced in presence of U2AF2. Binds to Y5 RNA in association with TROVE2. Binds to poly(U) RNA.::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.55::44-165 PF00076::RRM_1 99.70::47-117 GO:0005730::nucleolus very confident hh_2qfj_A_1::44-125,133-166 very confident psy3994 282 Q6DID3::Protein SCAF8 ::May play a role in mRNA processing.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.22::158-230 PF00076::RRM_1 99.60::161-225 GO:0005730::nucleolus confident hh_3d9j_A_1::1-134 very confident psy10362 388 Q96EP5::DAZ-associated protein 1 ::RNA-binding protein, which may be required during spermatogenesis.::Homo sapiens (taxid: 9606) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.56::200-326 PF00076::RRM_1 99.50::203-272 GO:0005730::nucleolus confident hh_1l3k_A_1::197-346 very confident psy16419 346 Q4WK03::Polyadenylate-binding protein, cytoplasmic and nuclear ::Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation termination-coupled poly(A) shortening, probably mediated by PAN.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.31::44-113 PF00076::RRM_1 99.50::47-108 GO:0005737::cytoplasm confident hh_2dnq_A_1::42-116 very confident psy10467 304 Q5E9J1::Heterogeneous nuclear ribonucleoprotein F ::Component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complexes which provide the substrate for the processing events that pre-mRNAs undergo before becoming functional, translatable mRNAs in the cytoplasm. Plays a role in the regulation of alternative splicing events. Binds G-rich sequences in pre-mRNAs and keeps target RNA in an unfolded state.::Bos taurus (taxid: 9913) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.29::142-220 PF00076::RRM_1 99.61::145-214 GO:0005737::cytoplasm confident rp_2hgm_A_1::117-218 very confident psy16116 612 Q6NXG1::Epithelial splicing regulatory protein 1 ::mRNA splicing factor that regulates the formation of epithelial cell-specific isoforms. Specifically regulates the expression of FGFR2-IIIb, an epithelial cell-specific isoform of FGFR2. Also regulates the splicing of CD44, CTNND1, ENAH, 3 transcripts that undergo changes in splicing during the epithelial-to-mesenchymal transition (EMT). Acts by directly binding specific sequences in mRNAs. Binds the GU-rich sequence motifs in the ISE/ISS-3, a cis-element regulatory region present in the mRNA of FGFR2.::Homo sapiens (taxid: 9606) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.35::438-610 PF00076::RRM_1 99.48::441-517 GO:0005737::cytoplasm confident hh_2dha_A_1::431-463,468-535 very confident psy93 503 Q8VIJ6::Splicing factor, proline- and glutamine-rich ::DNA- and RNA binding protein, involved in several nuclear processes. Essential pre-mRNA splicing factor required early in spliceosome formation and for splicing catalytic step II, probably as an heteromer with NONO. Binds to pre-mRNA in spliceosome C complex, and specifically binds to intronic polypyrimidine tracts. Interacts with U5 snRNA, probably by binding to a purine-rich sequence located on the 3' side of U5 snRNA stem 1b. May be involved in a pre-mRNA coupled splicing and polyadenylation process as component of a snRNP-free complex with SNRPA/U1A. The SFPQ-NONO heteromer associated with MATR3 may play a role in nuclear retention of defective RNAs. SFPQ may be involved in homologous DNA pairing; in vitro, promotes the invasion of ssDNA between a duplex DNA and produces a D-loop formation. The SFPQ-NONO heteromer may be involved in DNA unwinding by modulating the function of topoisomerase I/TOP1; in vitro, stimulates dissociation of TOP1 from DNA after cleavage and enhances its jumping between separate DNA helices. The SFPQ-NONO heteromer may be involved in DNA nonhomologous end joining (NHEJ) required for double-strand break repair and V(D)J recombination and may stabilize paired DNA ends; in vitro, the complex strongly stimulates DNA end joining, binds directly to the DNA substrates and cooperates with the Ku70/G22P1-Ku80/XRCC5 (Ku) dimer to establish a functional preligation complex. SFPQ is involved in transcriptional regulation. Transcriptional repression is probably mediated by an interaction of SFPQ with SIN3A and subsequent recruitment of histone deacetylases (HDACs). The SFPQ-NONO-NR5A1 complex binds to the CYP17 promoter and regulates basal and cAMP-dependent transcriptional avtivity. SFPQ isoform Long binds to the DNA binding domains (DBD) of nuclear hormone receptors, like RXRA and probably THRA, and acts as transcriptional corepressor in absence of hormone ligands. Binds the DNA sequence 5'-CTGAGTC-3' in the insulin-like growth factor response element (IGFRE) and inhibits IGF-I-stimulated transcriptional activity.::Mus musculus (taxid: 10090) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.26::113-222 PF00076::RRM_1 99.44::116-180 GO:0005737::cytoplasm confident no hit no match psy2983 370 Q8VH51::RNA-binding protein 39 ::Transcriptional coactivator for steroid nuclear receptors ESR1/ER-alpha and ESR2/ER-beta, and JUN/AP-1. May be involved in pre-mRNA splicing process.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.53::16-173 PF00076::RRM_1 99.57::117-187 GO:0005813::centrosome confident hh_1l3k_A_1::10-100,108-175,177-197 very confident psy12549 336 P29341::Polyadenylate-binding protein 1 ::Binds the poly(A) tail of mRNA. May be involved in cytoplasmic regulatory processes of mRNA metabolism such as pre-mRNA splicing. Its function in translational initiation regulation can either be enhanced by PAIP1 or repressed by PAIP2. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo. Involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain. Involved in regulation of nonsense-mediated decay (NMD) of mRNAs containing premature stop codons; for the recognition of premature termination codons (PTC) and initiation of NMD a competitive interaction between UPF1 and PABPC1 with the ribosome-bound release factors is proposed.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.47::110-237 PF00076::RRM_1 99.63::113-182 GO:0005829::cytosol confident hh_4f02_A_2::10-53,57-72,75-148,150-195 very confident psy3016 305 Q15427::Splicing factor 3B subunit 4 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. SF3B4 has been found in complex 'B' and 'C' as well. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.57::34-150 PF00076::RRM_1 99.67::37-107 GO:0005829::cytosol confident hh_1l3k_A_1::30-95,97-151,191-221,223-243 very confident psy15676 309 Q5ARI5::Peptidyl-prolyl cis-trans isomerase-like 4 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.38::189-268 PF00076::RRM_1 99.61::192-262 GO:0005829::cytosol confident hh_1x5s_A_1::185-270 very confident psy3928 115 Q7ZWE3::La-related protein 7 ::::Danio rerio (taxid: 7955) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.49::12-90 PF00076::RRM_1 99.73::15-85 GO:0005829::cytosol confident hh_1oo0_B_1::9-92 very confident psy13181 137 Q9WUK2::Eukaryotic translation initiation factor 4H ::Stimulates the RNA helicase activity of EIF4A in the translation initiation complex. Binds weakly mRNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.37::25-102 PF00076::RRM_1 99.63::28-97 GO:0005829::cytosol confident hh_2dng_A_1::17-87,89-108 very confident psy13319 117 Q61701::ELAV-like protein 4 ::May play a role in neuron-specific RNA processing. Protects CDKN1A mRNA from decay by binding to its 3'-UTR. Binds to AU-rich sequences (AREs) of target mRNAs, including VEGF and FOS mRNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.60::33-111 PF00076::RRM_1 99.77::36-106 GO:0005938::cell cortex confident hh_2cpz_A_1::28-115 very confident psy17949 96 Q5ZJX4::RNA-binding protein 38 ::RNA-binding protein that specifically bind the 3'-UTR of some transcripts, leading to maintain their stability. Also acts as a mRNA splicing factor. May play a role in myogenic differentiation.::Gallus gallus (taxid: 9031) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.34::42-94 PF00076::RRM_1 99.51::45-94 GO:0006977::DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest confident hh_2cqd_A_1::36-94 very confident psy14559 405 O01159::Probable splicing factor, arginine/serine-rich 7 ::::Caenorhabditis elegans (taxid: 6239) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.26::11-199 PF00076::RRM_1 99.57::169-236 GO:0008187::poly-pyrimidine tract binding confident hh_2jwn_A_1::164-242 very confident psy4086 305 Q3ZBP3::RNA-binding motif, single-stranded-interacting protein 1 ::Single-stranded DNA binding protein that interacts with the region upstream of the C-myc gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication.::Bos taurus (taxid: 9913) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.56::58-195 PF00076::RRM_1 99.67::61-131 GO:0008187::poly-pyrimidine tract binding confident hh_1l3k_A_1::55-119,121-197,199-205,208-223 very confident psy9313 356 Q28FX0::ELAV-like protein 3 ::Binds to AU-rich sequences (AREs) of target mRNAs. May also bind poly-A tracts via RRM 3. May be involved in neuronal differentiation and maintenance.::Xenopus tropicalis (taxid: 8364) very confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.52::26-148 PF00076::RRM_1 99.68::29-99 GO:0008266::poly(U) RNA binding very confident hh_1fxl_A_1::25-151,167-206 very confident psy10320 262 Q23120::Probable splicing factor, arginine/serine-rich 2 ::Plays a functionally redundant role in spermatogenesis and growth rate control. Required for the development of somatic gonad structures and for progression from larval stage to adulthood.::Caenorhabditis elegans (taxid: 6239) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.61::4-146 PF00076::RRM_1 99.72::6-68 GO:0009611::response to wounding confident hh_3md3_A_1::4-78,109-187 very confident psy3346 79 Q75A83::Multiple RNA-binding domain-containing protein 1 ::Involved in pre-rRNA processing.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.52::20-79 PF00076::RRM_1 99.72::23-79 GO:0010468::regulation of gene expression confident hh_2cph_A_1::14-56,58-79 very confident psy7847 170 Q91V81::RNA-binding protein 42 ::Binds (via the RRM domain) to the 3'-untranslated region (UTR) of CDKN1A mRNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.44::22-147 PF00076::RRM_1 99.70::90-163 GO:0010468::regulation of gene expression confident hh_1l3k_A_1::15-148,150-151,155-169 very confident psy3727 232 Q5RD26::Heterogeneous nuclear ribonucleoprotein H2 ::This protein is a component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complexes which provide the substrate for the processing events that pre-mRNAs undergo before becoming functional, translatable mRNAs in the cytoplasm. Binds poly(RG).::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.41::79-217 PF00076::RRM_1 99.62::81-147 GO:0015629::actin cytoskeleton confident no hit no match psy7053 65 Q6PDU1::Serine/arginine-rich splicing factor 2 ::Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. The phosphorylated form (by SRPK2) is required for cellular apoptosis in response to cisplatin treatment.::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.35::13-64 PF00076::RRM_1 99.50::16-64 GO:0016605::PML body confident bp_2lea_A_1::1-62 very confident psy7050 61 Q6PDU1::Serine/arginine-rich splicing factor 2 ::Necessary for the splicing of pre-mRNA. It is required for formation of the earliest ATP-dependent splicing complex and interacts with spliceosomal components bound to both the 5'- and 3'-splice sites during spliceosome assembly. It also is required for ATP-dependent interactions of both U1 and U2 snRNPs with pre-mRNA. The phosphorylated form (by SRPK2) is required for cellular apoptosis in response to cisplatin treatment.::Rattus norvegicus (taxid: 10116) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.35::13-61 PF00076::RRM_1 99.50::16-61 GO:0016607::nuclear speck confident hh_2kn4_A_1::11-61 very confident psy15187 298 P92204::Negative elongation factor E ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex, causes transcriptional pausing.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.33::145-237 PF00076::RRM_1 99.55::148-231 GO:0017053::transcriptional repressor complex confident hh_1l3k_A_1::141-219,221-242 very confident psy11609 83 Q8SX83::Protein split ends ::Probable corepressor protein, which regulates different key pathways such as the EGF receptor and Wg pathways. Involved in neuronal cell fate, survival and axon guidance, cell cycle regulation and repression of head identity in the embryonic trunk. May act with the Hox gene Deformed and the EGF receptor signaling pathway. Positive regulator of the Wg pathway in larval tissues but not in embryonic tissues. May act as a transcriptional corepressor protein, which repress transcription via the recruitment of large complexes containing histone deacetylase proteins.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.66::2-74 PF00076::RRM_1 99.75::3-69 GO:0017053::transcriptional repressor complex confident hh_2jvo_A_1::2-33,38-76 very confident psy2618 390 Q01085::Nucleolysin TIAR ::RNA-binding protein. Possesses nucleolytic activity against cytotoxic lymphocyte target cells. May be involved in apoptosis.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.53::7-154 PF00076::RRM_1 99.62::10-77 GO:0017091::AU-rich element binding confident hh_1l3k_A_1::3-65,67-156,158-178 very confident psy11978 91 O95319::CUGBP Elav-like family member 2 ::RNA-binding protein implicated in the regulation of several post-transcriptional events. Involved in pre-mRNA alternative splicing, mRNA translation and stability. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of TNNT2 in embryonic, but not adult, skeletal muscle. Activates TNNT2 exon 5 inclusion by antagonizing the repressive effect of PTB. Acts as both an activator and repressor of a pair of coregulated exons: promotes inclusion of the smooth muscle (SM) exon but exclusion of the non-muscle (NM) exon in actinin pre-mRNAs. Promotes inclusion of exonS 21 and exclusion of exon 5 of the NMDA receptor R1 pre-mRNA. Involved in the apoB RNA editing activity. Increases COX2 mRNA stability and inhibits COX2 mRNA translation in epithelial cells after radiation injury (By similarity). Modulates the cellular apoptosis program by regulating COX2-mediated prostaglandin E2 (PGE2) expression (By similarity). Binds to (CUG)n triplet repeats in the 3'-UTR of transcripts such as DMPK. Binds to the muscle-specific splicing enhancer (MSE) intronic sites flanking the TNNT2 alternative exon 5. Binds preferentially to UG-rich sequences, in particular UG repeat and UGUU motifs. Binds to apoB mRNA, specifically to AU-rich sequences located immediatly upstream of the edited cytidine. Binds AU-rich sequences in the 3'-UTR of COX2 mRNA (By similarity). Binds to an intronic RNA element responsible for the silencing of exon 21 splicing (By similarity). Binds to (CUG)n repeats.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.55::27-89 PF00076::RRM_1 99.73::30-89 GO:0030532::small nuclear ribonucleoprotein complex confident hh_3nmr_A_1::26-89 very confident psy4057 246 Q2KIR1::U1 small nuclear ribonucleoprotein A ::Binds stem loop II of U1 snRNA. It is the first snRNP to interact with pre-mRNA. This interaction is required for the subsequent binding of U2 snRNP and the U4/U6/U5 tri-snRNP. In a snRNP-free form (SF-A) may be involved in coupled pre-mRNA splicing and polyadenylation process. Binds preferentially to the 5'-UGCAC-3' motif in vitro.::Bos taurus (taxid: 9913) very confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.59::11-231 PF00076::RRM_1 99.70::14-81 GO:0030620::U2 snRNA binding confident hh_3pgw_A_1::7-136,138-246 very confident psy8956 333 Q4WK03::Polyadenylate-binding protein, cytoplasmic and nuclear ::Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation termination-coupled poly(A) shortening, probably mediated by PAN.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.50::34-166 PF00076::RRM_1 99.68::37-106 GO:0031330::negative regulation of cellular catabolic process confident hh_4f02_A_2::127-212,224-304 very confident psy4080 403 P19018::Transformer-2 sex-determining protein ::Required for female sex determination in somatic cells and for spermatogenesis in male germ cells. Positive regulator of female-specific splicing and/or polyadenylation of doublesex (dsx) pre-mRNA. Splicing requires an enhancer complex, dsxRE (dsx repeat element: which contains six copies of a 13-nucleotide repeat and a purine-rich enhancer (PRE)). DsxRE is formed through cooperative interactions between tra, tra2 and the sr proteins, and these interactions require both the repeat sequences and PRE. PRE is required for specific binding of tra2 to the dsxRE. Protein-RNA and protein-protein interactions are involved in tra-2 dependent activation and repression of alternative splicing. Together with tra-2, plays a role in switching fru splicing from the male-specific pattern to the female-specific pattern through activation of the female-specific fru 5'-splice site.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.53::179-329 PF00076::RRM_1 99.66::182-252 GO:0032502::developmental process confident hh_1l3k_A_1::174-240,242-264,274-298,302-334 very confident psy9171 118 Q91Z31::Polypyrimidine tract-binding protein 2 ::RNA-binding protein which binds to intronic polypyrimidine tracts and mediates negative regulation of exons splicing. May antagonize in a tissue-specific manner the ability of NOVA1 to activate exon selection. Beside its function in pre-mRNA splicing, plays also a role in the regulation of translation.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.39::30-104 PF00076::RRM_1 99.61::33-99 GO:0033119::negative regulation of RNA splicing confident hh_1sjq_A_1::27-108 very confident psy15152 192 Q5D018::RNA-binding protein 8A ::Component of a splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of a few core proteins and several more peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Core components of the EJC, that remains bound to spliced mRNAs throughout all stages of mRNA metabolism, functions to mark the position of the exon-exon junction in the mature mRNA and thereby influences downstream processes of gene expression including mRNA splicing, nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Remains associated with mRNAs in the cytoplasm until the mRNAs engage the translation machinery. Its removal from cytoplasmic mRNAs requires translation initiation from EJC-bearing spliced mRNAs. Associates preferentially with mRNAs produced by splicing. Does not interact with pre-mRNAs, introns, or mRNAs produced from intronless cDNAs. Associates with both nuclear mRNAs and newly exported cytoplasmic mRNAs.::Danio rerio (taxid: 7955) very confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.57::58-137 PF00076::RRM_1 99.76::61-131 GO:0035145::exon-exon junction complex confident hh_3ex7_B_1::48-144 very confident psy10284 103 Q08E07::CUGBP Elav-like family member 3 ::RNA-binding protein involved in the regulation of pre-mRNA alternative splicing. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of cardiac isoforms of TNNT2 during heart remodeling at the juvenile to adult transition. Activates the splicing of MAPT/Tau exon 10. Binds to muscle-specific splicing enhancer (MSE) intronic sites flanking the alternative exon 5 of TNNT2 pre-mRNA.::Bos taurus (taxid: 9913) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.36::62-103 PF00076::RRM_1 98.69::65-100 GO:0043234::protein complex confident hh_2dnh_A_1::61-102 very confident psy10283 59 Q8CIN6::CUGBP Elav-like family member 3 ::RNA-binding protein involved in the regulation of pre-mRNA alternative splicing. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of cardiac isoforms of TNNT2 during heart remodeling at the juvenile to adult transition. Activates the splicing of MAPT/Tau exon 10. Binds to muscle-specific splicing enhancer (MSE) intronic sites flanking the alternative exon 5 of TNNT2 pre-mRNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.98::16-59 PF00076::RRM_1 99.16::19-57 GO:0043234::protein complex confident hh_2dnh_A_1::14-58 very confident psy8615 128 Q92879::CUGBP Elav-like family member 1 ::RNA-binding protein implicated in the regulation of several post-transcriptional events. Involved in pre-mRNA alternative splicing, mRNA translation and stability. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of cardiac isoforms of TNNT2 during heart remodeling at the juvenile to adult transition. Acts as both an activator and repressor of a pair of coregulated exons: promotes inclusion of the smooth muscle (SM) exon but exclusion of the non-muscle (NM) exon in actinin pre-mRNAs. Activates SM exon 5 inclusion by antagonizing the repressive effect of PTB. Promotes exclusion of exon 11 of the INSR pre-mRNA. Inhibits, together with HNRNPH1, insulin receptor (IR) pre-mRNA exon 11 inclusion in myoblast. Increases translation and controls the choice of translation initiation codon of CEBPB mRNA. Increases mRNA translation of CEBPB in aging liver (By similarity). Increases translation of CDKN1A mRNA by antagonizing the repressive effect of CALR3. Mediates rapid cytoplasmic mRNA deadenylation. Recruits the deadenylase PARN to the poly(A) tail of EDEN-containing mRNAs to promote their deadenylation. Required for completion of spermatogenesis (By similarity). Binds to (CUG)n triplet repeats in the 3'-UTR of transcripts such as DMPK and to Bruno response elements (BREs). Binds to muscle-specific splicing enhancer (MSE) intronic sites flanking the alternative exon 5 of TNNT2 pre-mRNA. Binds to AU-rich sequences (AREs or EDEN-like) localized in the 3'-UTR of JUN and FOS mRNAs. Binds to the IR RNA. Binds to the 5'-region of CDKN1A and CEBPB mRNAs. Binds with the 5'-region of CEBPB mRNA in aging liver.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.62::43-121 PF00076::RRM_1 99.77::46-116 GO:0043234::protein complex confident hh_2cpz_A_1::37-96,98-123 very confident psy16184 363 Q62376::U1 small nuclear ribonucleoprotein 70 kDa ::Mediates the splicing of pre-mRNA by binding to the loop I region of U1-snRNA. The truncated isoform cannot bind U1-snRNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.43::101-179 PF00076::RRM_1 99.66::104-174 GO:0043484::regulation of RNA splicing confident hh_3pgw_S_1::1-212 very confident psy2347 207 Q69KL9::Serine/arginine-rich splicing factor RSZ21A ::Involved in pre-mRNA splicing.::Oryza sativa subsp. japonica (taxid: 39947) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.48::9-82 PF00076::RRM_1 99.71::12-77 GO:0044446::intracellular organelle part confident no hit no match psy10308 225 Q8SY33::Protein Gawky ::Required for gene silencing mediated by micro-RNAs (miRNAs). Silences both polyadenylated and deadenylated mRNAs. Required for miRNA-mediated translational repression and mRNA decay. Not required for miRNA target recognition. Necessary to initiate but not to maintain silencing. Promotes mRNA deadenylation through the recruitment of the CCR4-NOT and PAN complexes and promotes decapping by the DCP1-DCP2 complex. Dissociates from silenced mRNAs after deadenylation. Required for completion of nuclear divisions during early embryonic development.::Drosophila melanogaster (taxid: 7227) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.18::57-129 PF00076::RRM_1 99.58::59-123 GO:0044699::single-organism process confident hh_2wbr_A_1::53-138 very confident psy15045 363 Q13148::TAR DNA-binding protein 43 ::DNA and RNA-binding protein which regulates transcription and splicing. Involved in the regulation of CFTR splicing. It promotes CFTR exon 9 skipping by binding to the UG repeated motifs in the polymorphic region near the 3'-splice site of this exon. The resulting aberrant splicing is associated with pathological features typical of cystic fibrosis. May also be involved in microRNA biogenesis, apoptosis and cell division. Can repress HIV-1 transcription by binding to the HIV-1 long terminal repeat. Stabilizes the low molecular weight neurofilament (NFL) mRNA through a direct interaction with the 3' UTR.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.46::103-225 PF00076::RRM_1 99.54::106-174 GO:0045111::intermediate filament cytoskeleton confident hh_1l3k_A_1::99-267 very confident psy17262 172 Q5RBU8::Heterogeneous nuclear ribonucleoproteins A2/B1 ::Involved with pre-mRNA processing. Forms complexes (ribonucleosomes) with at least 20 other different hnRNP and heterogeneous nuclear RNA in the nucleous.::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.68::16-142 PF00076::RRM_1 99.74::19-88 GO:0045111::intermediate filament cytoskeleton confident hh_1l3k_A_1::7-167 very confident psy2871 178 Q5RBU8::Heterogeneous nuclear ribonucleoproteins A2/B1 ::Involved with pre-mRNA processing. Forms complexes (ribonucleosomes) with at least 20 other different hnRNP and heterogeneous nuclear RNA in the nucleous.::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.69::16-165 PF00076::RRM_1 99.73::19-88 GO:0045111::intermediate filament cytoskeleton confident hh_1l3k_A_1::8-177 very confident psy16454 304 Q5RBU8::Heterogeneous nuclear ribonucleoproteins A2/B1 ::Involved with pre-mRNA processing. Forms complexes (ribonucleosomes) with at least 20 other different hnRNP and heterogeneous nuclear RNA in the nucleous.::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.61::8-137 PF00076::RRM_1 99.62::102-171 GO:0045111::intermediate filament cytoskeleton confident no hit no match psy11409 320 Q9VSR3::Probable RNA-binding protein orb2 ::::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.49::53-222 PF00076::RRM_1 99.47::164-223 GO:0045202::synapse very confident hh_2dnl_A_1::51-155 very confident psy10125 312 Q3T106::Serine/arginine-rich splicing factor 7 ::Required for pre-mRNA splicing. Represses the splicing of MAPT/Tau exon 10.::Bos taurus (taxid: 9913) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.03::38-112 PF00076::RRM_1 99.41::41-106 GO:0045292::mRNA cis splicing, via spliceosome confident no hit no match psy14139 327 Q6NZZ9::Pre-mRNA-splicing factor RBM22 ::Involved in the first step of pre-mRNA splicing. Binds directly to the internal stem-loop (ISL) domain of the U6 snRNA and to the pre-mRNA intron near the 5' splice site during the activation and catalytic phases of the spliceosome cycle (By similarity). Involved in early embryogenesis.::Danio rerio (taxid: 7955) very confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.02::213-287 PF00076::RRM_1 99.45::216-281 GO:0045292::mRNA cis splicing, via spliceosome very confident hh_3u1l_A_1::134-184,186-187,193-207,209-268,270-290 very confident psy518 81 Q9V3L6::Nuclear cap-binding protein subunit 2 ::Component of the cap-binding complex (CBC), which binds co-transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference via its interaction with Ars2 and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires Cbp80 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.35::33-81 PF00076::RRM_1 99.43::36-81 GO:0045292::mRNA cis splicing, via spliceosome confident hh_2ki2_A_1::34-81 very confident psy2204 231 P26369::Splicing factor U2AF 65 kDa subunit ::Necessary for the splicing of pre-mRNA. Induces cardiac troponin-T (TNNT2) pre-mRNA exon inclusion in muscle. Regulates the TNNT2 exon 5 inclusion through competition with MBNL1. Binds preferentially to a single-stranded structure within the polypyrimidine tract of TNNT2 intron 4 during spliceosome assembly. Required for the export of mRNA out of the nucleus, even if the mRNA is encoded by an intron-less gene. Represses the splicing of MAPT/Tau exon 10.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.44::46-179 PF00076::RRM_1 99.60::49-123 GO:0048025::negative regulation of mRNA splicing, via spliceosome confident hh_2g4b_A_1::44-133,155-194 very confident psy3854 222 P0CL96::Pre-rRNA-processing protein ESF2 ::Involved in the small subunit (SSU) processome assembly and function, and in the 18S rRNA synthesis. Required for the early cleavages at sites A0, A1 and A2.::Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.50::36-115 PF00076::RRM_1 99.74::39-114 GO:0048731::system development confident hh_3s8s_A_1::35-78,85-115 confident psy3721 207 Q94901::RNA-binding protein lark ::Essential RNA-binding protein. May be required for circadian repression of eclosion. Also essential for nurse cell dumping during oogenesis, the process whereby the cytoplasmic contents of nurse cells are transferred to the oocyte late in it's development.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.44::35-147 PF00076::RRM_1 99.58::38-100 GO:0050896::response to stimulus confident hh_1l3k_A_1::31-88,90-166,168-189 very confident psy13318 100 Q28GD4::ELAV-like protein 2 ::Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of target mRNAs. Required for the vegetal localization of vg1 mRNA. Probably required for nervous system development.::Xenopus tropicalis (taxid: 8364) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.48::32-99 PF00076::RRM_1 99.63::35-96 GO:0051260::protein homooligomerization confident hh_1fxl_A_1::32-99 very confident psy6353 136 Q28GD4::ELAV-like protein 2 ::Binds to poly-U elements and AU-rich elements (AREs) in the 3'-UTR of target mRNAs. Required for the vegetal localization of vg1 mRNA. Probably required for nervous system development.::Xenopus tropicalis (taxid: 8364) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.61::2-117 PF00076::RRM_1 99.75::2-67 GO:0051260::protein homooligomerization confident rp_1fxl_A_1::31-116 very confident psy1188 230 P31209::Polyadenylate-binding protein, cytoplasmic and nuclear ::Binds the poly(A) tail of mRNA. Appears to be an important mediator of the multiple roles of the poly(A) tail in mRNA biogenesis, stability and translation. In the nucleus, involved in both mRNA cleavage and polyadenylation. Is also required for efficient mRNA export to the cytoplasm. Acts in concert with a poly(A)-specific nuclease (PAN) to affect poly(A) tail shortening, which may occur concomitantly with either nucleocytoplasmic mRNA transport or translational initiation. In the cytoplasm, stimulates translation initiation and regulates mRNA decay through translation termination-coupled poly(A) shortening, probably mediated by PAN.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.41::95-166 PF00076::RRM_1 99.71::98-160 GO:0070937::CRD-mediated mRNA stability complex confident hh_2i2y_A_1::45-50,52-67,70-73,75-168 very confident psy1185 131 O43390::Heterogeneous nuclear ribonucleoprotein R ::Component of ribonucleosomes, which are complexes of at least 20 other different heterogenious nuclear ribonucleoproteins (hnRNP). hnRNP play an important role in processing of precursor mRNA in the nucleus.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.52::4-112 PF00076::RRM_1 99.72::7-106 GO:0071011::precatalytic spliceosome confident hh_2dnq_A_1::3-37,73-96,99-117 very confident psy4441 249 Q96T37::Putative RNA-binding protein 15 ::May be implicated in HOX gene regulation.::Homo sapiens (taxid: 9606) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.36::74-152 PF00076::RRM_1 99.55::77-146 GO:0071011::precatalytic spliceosome confident hh_3q2s_C_1::73-94,99-153 confident psy10279 80 Q9VRV7::Pre-mRNA branch site p14-like protein ::Necessary for the splicing of pre-mRNA.::Drosophila melanogaster (taxid: 7227) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.27::17-70 PF00076::RRM_1 99.55::20-69 GO:0071011::precatalytic spliceosome confident hh_3lqv_A_1::11-69 very confident psy1078 199 Q8R0F5::RNA-binding motif protein, X-linked 2 ::::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.59::33-111 PF00076::RRM_1 99.76::36-106 GO:0071013::catalytic step 2 spliceosome confident hh_2cjk_A_1::2-26,28-93,95-112 very confident psy14476 303 Q13310::Polyadenylate-binding protein 4 ::Binds the poly(A) tail of mRNA. May be involved in cytoplasmic regulatory processes of mRNA metabolism. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 97.87::3-45 PF00658::PABP 99.94::219-290 GO:0008143::poly(A) RNA binding confident rp_1g9l_A_1::159-171,182-299 very confident psy17497 806 Q5R7X2::U2 snRNP-associated SURP motif-containing protein ::::Pongo abelii (taxid: 9601) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.13::195-277 PF01805::Surp 99.64::353-406 GO:0003729::mRNA binding confident hh_1x5s_A_1::192-228,232-280 very confident psy258 238 Q5ZJV6::Calcipressin-3 ::Inhibits calcineurin-dependent transcriptional responses by binding to the catalytic domain of calcineurin A. Could play a role during central nervous system development.::Gallus gallus (taxid: 9031) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 97.74::38-141 PF04847::Calcipressin 100.00::91-236 GO:0032513::negative regulation of protein phosphatase type 2B activity confident hh_1wey_A_1::35-65,91-141,143-145,148-164 very confident psy4687 339 A4IFB1::Serrate RNA effector molecule homolog ::Acts as a mediator between the cap-binding complex (CBC) and the primary microRNAs (miRNAs) processing machinery during cell proliferation. Contributes to the stability and delivery of capped primary miRNA transcripts to the primary miRNA processing complex containing DGCR8 and DROSHA, thereby playing a role in RNA-mediated gene silencing (RNAi) by miRNAs. Binds capped RNAs (m7GpppG-capped RNA); however interaction is probably mediated via its interaction with NCBP1/CBP80 component of the CBC complex. Involved in cell cycle progression at S phase. Does not directly confer arsenite resistance but rather modulates arsenic sensitivity. Independently of its activity on miRNAs, necessary and sufficient to promote neural stem cell self-renewal. Does so by directly binding SOX2 promoter and positively regulating its transcription.::Bos taurus (taxid: 9913) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 95.68::34-107 PF04959::ARS2 100.00::229-339 GO:0071013::catalytic step 2 spliceosome confident hh_3ax1_A_1::118-144,151-154,156-174,177-177,181-225,232-245,249-269,274-338 very confident psy7437 279 Q8VIJ6::Splicing factor, proline- and glutamine-rich ::DNA- and RNA binding protein, involved in several nuclear processes. Essential pre-mRNA splicing factor required early in spliceosome formation and for splicing catalytic step II, probably as an heteromer with NONO. Binds to pre-mRNA in spliceosome C complex, and specifically binds to intronic polypyrimidine tracts. Interacts with U5 snRNA, probably by binding to a purine-rich sequence located on the 3' side of U5 snRNA stem 1b. May be involved in a pre-mRNA coupled splicing and polyadenylation process as component of a snRNP-free complex with SNRPA/U1A. The SFPQ-NONO heteromer associated with MATR3 may play a role in nuclear retention of defective RNAs. SFPQ may be involved in homologous DNA pairing; in vitro, promotes the invasion of ssDNA between a duplex DNA and produces a D-loop formation. The SFPQ-NONO heteromer may be involved in DNA unwinding by modulating the function of topoisomerase I/TOP1; in vitro, stimulates dissociation of TOP1 from DNA after cleavage and enhances its jumping between separate DNA helices. The SFPQ-NONO heteromer may be involved in DNA nonhomologous end joining (NHEJ) required for double-strand break repair and V(D)J recombination and may stabilize paired DNA ends; in vitro, the complex strongly stimulates DNA end joining, binds directly to the DNA substrates and cooperates with the Ku70/G22P1-Ku80/XRCC5 (Ku) dimer to establish a functional preligation complex. SFPQ is involved in transcriptional regulation. Transcriptional repression is probably mediated by an interaction of SFPQ with SIN3A and subsequent recruitment of histone deacetylases (HDACs). The SFPQ-NONO-NR5A1 complex binds to the CYP17 promoter and regulates basal and cAMP-dependent transcriptional avtivity. SFPQ isoform Long binds to the DNA binding domains (DBD) of nuclear hormone receptors, like RXRA and probably THRA, and acts as transcriptional corepressor in absence of hormone ligands. Binds the DNA sequence 5'-CTGAGTC-3' in the insulin-like growth factor response element (IGFRE) and inhibits IGF-I-stimulated transcriptional activity.::Mus musculus (taxid: 10090) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 95.40::2-57 PF08075::NOPS 99.93::50-102 GO:0042382::paraspeckles confident hh_3sde_A_1::2-71,73-142 very confident psy13227 247 Q7QJV0::Eukaryotic translation initiation factor 3 subunit G ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. This subunit can bind 18S rRNA.::Anopheles gambiae (taxid: 7165) very confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.46::165-243 PF12353::eIF3g 100.00::4-98 GO:0002188::translation reinitiation confident hh_2f3j_A_1::163-201,203-245 very confident psy16913 81 Q8N6W0::CUGBP Elav-like family member 5 ::RNA-binding protein implicated in the regulation of pre-mRNA alternative splicing. Mediates exon inclusion and/or exclusion in pre-mRNA that are subject to tissue-specific and developmentally regulated alternative splicing. Specifically activates exon 5 inclusion of cardiac isoforms of TNNT2 during heart remodeling at the juvenile to adult transition. Binds to muscle-specific splicing enhancer (MSE) intronic sites flanking the alternative exon 5 of TNNT2 pre-mRNA.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.25::1-73 PF13893::RRM_5 99.63::1-72 GO:0000380::alternative mRNA splicing, via spliceosome very confident hh_2khc_A_1::1-24,39-73 very confident psy9170 94 P26599::Polypyrimidine tract-binding protein 1 ::Plays a role in pre-mRNA splicing and in the regulation of alternative splicing events. Activates exon skipping of its own pre-mRNA during muscle cell differentiation. Binds to the polypyrimidine tract of introns. May promote RNA looping when bound to two separate polypyrimidine tracts in the same pre-mRNA. May promote the binding of U2 snRNP to pre-mRNA. Cooperates with RAVER1 to modulate switching between mutually exclusive exons during maturation of the TPM1 pre-mRNA. Represses the splicing of MAPT/Tau exon 10.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 91.62::4-88 PF13893::RRM_5 98.36::6-43 GO:0000381::regulation of alternative mRNA splicing, via spliceosome confident hh_2ad9_A_1::4-55 very confident psy17775 211 Q8WVV9::Heterogeneous nuclear ribonucleoprotein L-like ::RNA-binding protein that functions as regulator of alternative splicing for multiple target mRNAs, including PTPRC/CD45 and STAT5A. Required for alternative splicing of PTPRC.::Homo sapiens (taxid: 9606) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.40::66-211 PF13893::RRM_5 99.02::81-139 GO:0003723::RNA binding confident bp_3tyt_A_1::77-99,104-129,131-146,148-206 very confident psy16559 207 Q09176::Splicing factor U2AF 23 kDa subunit ::Necessary for the splicing of pre-mRNA. The SF1-U2AF59-U2AF23 complex has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.46::136-198 PF13893::RRM_5 99.48::138-197 GO:0005829::cytosol confident hh_1jmt_A_1::92-109,114-198 very confident psy6355 83 Q61701::ELAV-like protein 4 ::May play a role in neuron-specific RNA processing. Protects CDKN1A mRNA from decay by binding to its 3'-UTR. Binds to AU-rich sequences (AREs) of target mRNAs, including VEGF and FOS mRNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.36::1-47 PF13893::RRM_5 98.57::9-46 GO:0010468::regulation of gene expression confident hh_1fxl_A_1::2-46 very confident psy11608 99 Q62504::Msx2-interacting protein ::May serve as a nuclear matrix platform that organizes and integrates transcriptional responses. In osteoblasts, supports transcription activation: synergizes with RUNX2 to enhance FGFR2-mediated activation of the osteocalcin FGF-responsive element (OCFRE). Has also been shown to be an essential corepressor protein, which probably regulates different key pathways, such as the Notch pathway. Negative regulator of the Notch pathway via its interaction with RBPSUH, which prevents the association between NOTCH1 and RBPSUH, and therefore suppresses the transactivation activity of Notch signaling. Blocks the differentiation of precursor B-cells into marginal zone B-cells. Probably represses transcription via the recruitment of large complexes containing histone deacetylase proteins. May bind both to DNA and RNA.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.91::2-83 PF13893::RRM_5 99.11::2-50 GO:0017053::transcriptional repressor complex confident hh_1why_A_1::2-11,15-54 very confident psy2111 63 Q9Y2U8::Inner nuclear membrane protein Man1 ::Can function as a specific repressor of TGF-beta, activin, and BMP signaling through its interaction with the R-SMAD proteins. Antagonizes TGF-beta-induced cell proliferation arrest.::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 92.43::2-33 PF13893::RRM_5 98.40::2-31 GO:0030512::negative regulation of transforming growth factor beta receptor signaling pathway confident hh_3v4m_A_1::2-39 very confident psy2134 104 P42698::DNA-damage-repair/toleration protein DRT111, chloroplastic ::Seems to be involved in the resistance to UV light and chemical DNA-damaging agents.::Arabidopsis thaliana (taxid: 3702) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 97.47::8-92 PF13893::RRM_5 99.26::13-91 GO:0044428::nuclear part confident hh_3dxb_A_1::8-60,76-104 very confident psy4383 89 Q9UKM9::RNA-binding protein Raly ::Probable-RNA binding protein. Could be a heterogeneous nuclear ribonucleoprotein (hnRNP). May be involved in pre-mRNA splicing.::Homo sapiens (taxid: 9606) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.11::13-74 PF13893::RRM_5 98.95::30-71 GO:0045120::pronucleus confident hh_1wf1_A_1::30-74 very confident psy1928 105 O08583::THO complex subunit 4 ::Component of a splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of a few core proteins and several more peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Plays a role in mRNA processing and export. Acts as chaperone and promotes the dimerization of transcription factors containing basic leucine zipper (bZIP) domains and thereby promotes transcriptional activation. May function as scaffold that mediates interactions between proteins and/or RNA. Integral part of the THO/TREX complex that is recruited to transcribed genes and travels with the RNA polymerase during elongation. Is part of the exon junction complex that remains associated with spliced mRNA and plays an important role in mRNA export and nonsense-mediated RNA decay.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.92::1-62 PF13893::RRM_5 99.50::2-61 GO:0046784::intronless viral mRNA export from host nucleus confident hh_2f3j_A_1::1-62 very confident psy12245 189 Q7TP17::Splicing factor U2AF 26 kDa subunit ::RNA-binding protein that function as a pre-mRNA splicing factor. Plays a critical role in both constitutive and enhancer-dependent splicing by mediating protein-protein interactions and protein-RNA interactions required for accurate 3'-splice site selection. Acts by enhancing the binding of U2AF2 to weak pyrimidine tracts. Also participates in the regulation of alternative pre-mRNA splicing. Activates exon 5 skipping of PTPRC during T-cell activation; an event reversed by GFI1. Binds to RNA at the AG dinucleotide at the 3'-splice site.::Rattus norvegicus (taxid: 10116) very confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.82::71-133 PF13893::RRM_5 99.48::72-132 GO:0071011::precatalytic spliceosome very confident hh_1jmt_A_1::28-49,52-77,79-133 very confident psy4990 130 Q94535::Splicing factor U2af 38 kDa subunit ::Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly.::Drosophila melanogaster (taxid: 7227) very confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 98.91::17-83 PF13893::RRM_5 99.55::22-82 GO:0071011::precatalytic spliceosome very confident hh_1jmt_A_1::6-27,29-83 very confident psy3068 152 P55795::Heterogeneous nuclear ribonucleoprotein H2 ::This protein is a component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complexes which provide the substrate for the processing events that pre-mRNAs undergo before becoming functional, translatable mRNAs in the cytoplasm. Binds poly(RG).::Homo sapiens (taxid: 9606) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.42::54-128 PF14259::RRM_6 99.65::57-123 GO:0015629::actin cytoskeleton confident hh_2hgn_A_1::55-132 very confident psy3067 141 Q5RD26::Heterogeneous nuclear ribonucleoprotein H2 ::This protein is a component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complexes which provide the substrate for the processing events that pre-mRNAs undergo before becoming functional, translatable mRNAs in the cytoplasm. Binds poly(RG).::Pongo abelii (taxid: 9601) portable COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.29::25-102 PF14259::RRM_6 99.64::28-97 GO:0015629::actin cytoskeleton confident hh_1wg5_A_1::26-60,62-108 very confident psy3345 787 Q8R3C6::Probable RNA-binding protein 19 ::Plays a role in embryo pre-implantation development.::Mus musculus (taxid: 10090) confident COG0724::RNA-binding proteins (RRM domain) [General function prediction only] 99.30::580-749 PF14259::RRM_6 99.50::15-89 GO:0044428::nuclear part confident hh_1l3k_A_1::577-617,623-646,648-669,678-721,723-747,749-749,751-772 very confident psy16052 476 A2VEC9::SCO-spondin ::Involved in the modulation of neuronal aggregation. May be involved in developmental events during the formation of the central nervous system.::Homo sapiens (taxid: 9606) portable COG0726::CDA1 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism] 99.76::179-308 PF01522::Polysacc_deac_1 99.85::177-310 GO:0005737::cytoplasm very confident hh_2y8u_A_1::177-190,192-203,211-249,254-273,277-296,298-309 very confident psy16054 563 P98166::Very low-density lipoprotein receptor ::Binds VLDL and transports it into cells by endocytosis. In order to be internalized, the receptor-ligand complexes must first cluster into clathrin-coated pits. Binding to Reelin induces tyrosine phosphorylation of Dab1 and modulation of Tau phosphorylation.::Rattus norvegicus (taxid: 10116) portable COG0726::CDA1 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism] 99.80::219-348 PF01522::Polysacc_deac_1 99.88::217-350 GO:0008061::chitin binding very confident hh_3m0c_C_1::20-56,58-77,79-107,109-115,119-216 very confident psy10480 435 no hit no match COG0726::CDA1 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism] 99.82::122-378 PF01522::Polysacc_deac_1 99.87::120-247 GO:0022008::neurogenesis confident hh_3rxz_A_1::135-147,153-153,156-190,192-219,223-254,260-267,282-293,295-310,312-333,335-385 very confident psy1562 620 no hit no match COG0726::CDA1 Predicted xylanase/chitin deacetylase [Carbohydrate transport and metabolism] 99.75::203-329 PF01522::Polysacc_deac_1 99.87::201-331 GO:0022008::neurogenesis confident hh_3qbu_A_1::218-227,235-272,274-300,304-316,318-337,340-378,380-386,389-449,519-542 very confident psy11511 631 O35899::Sodium-dependent serotonin transporter ::Serotonin transporter whose primary function in the central nervous system involves the regulation of serotonergic signaling via transport of serotonin molecules from the synaptic cleft back into the pre-synaptic terminal for re-utilization. Plays a key role in mediating regulation of the availability of serotonin to other receptors of serotonergic systems. Terminates the action of serotonin and recycles it in a sodium-dependent manner.::Cavia porcellus (taxid: 10141) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::35-622 PF00209::SNF 100.00::36-620 GO:0005215::transporter activity confident hh_2a65_A_1::33-146,153-155,179-189,245-391,448-451,454-518,520-524,531-551,555-620 very confident psy1706 540 P30531::Sodium- and chloride-dependent GABA transporter 1 ::Terminates the action of GABA by its high affinity sodium-dependent reuptake into presynaptic terminals.::Homo sapiens (taxid: 9606) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::19-539 PF00209::SNF 100.00::20-540 GO:0005332::gamma-aminobutyric acid:sodium symporter activity confident hh_2a65_A_1::17-138,145-146,170-171,183-193,195-271,347-419,422-486,491-516,520-529,531-540 very confident psy15471 550 Q761V0::Sodium- and chloride-dependent glycine transporter 2 ::Terminates the action of glycine by its high affinity sodium-dependent reuptake into presynaptic terminals. May be responsible for the termination of neurotransmission at strychnine-sensitive glycinergic synapses.::Mus musculus (taxid: 10090) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::2-434 PF00209::SNF 100.00::2-475 GO:0005332::gamma-aminobutyric acid:sodium symporter activity very confident hh_2a65_A_1::2-78,84-86,98-101,107-112,114-264,267-332,336-360,364-449,453-463 very confident psy15483 830 P23977::Sodium-dependent dopamine transporter ::Amine transporter. Terminates the action of dopamine by its high affinity sodium-dependent reuptake into presynaptic terminals.::Rattus norvegicus (taxid: 10116) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::63-819 PF00209::SNF 100.00::64-744 GO:0015171::amino acid transmembrane transporter activity confident hh_2a65_A_1::63-185,192-195,204-214,216-219,222-259,268-269,272-303,305-320,391-392,468-476,507-516,519-522,538-569,572-636,660-666,690-691,693-693,720-724,731-736,744-746,751-752,756-819 very confident psy594 218 Q60857::Sodium-dependent serotonin transporter ::Serotonin transporter whose primary function in the central nervous system involves the regulation of serotonergic signaling via transport of serotonin molecules from the synaptic cleft back into the pre-synaptic terminal for re-utilization. Plays a key role in mediating regulation of the availability of serotonin to other receptors of serotonergic systems. Terminates the action of serotonin and recycles it in a sodium-dependent manner.::Mus musculus (taxid: 10090) portable COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::2-211 PF00209::SNF 100.00::2-205 GO:0015171::amino acid transmembrane transporter activity confident hh_2a65_A_1::2-65,67-79,81-84,87-210 very confident psy8124 106 Q8BJI1::Sodium-dependent neutral amino acid transporter SLC6A17 ::Functions as a sodium-dependent vesicular transporter selective for proline, glycine, leucine and alanine. In contrast to other members of this neurotransmitter transporter family, does not appear to be chloride-dependent.::Mus musculus (taxid: 10090) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 99.81::55-105 PF00209::SNF 99.76::56-105 GO:0031526::brush border membrane confident hh_2a65_A_1::55-105 very confident psy10392 453 Q8BG16::Sodium-dependent neutral amino acid transporter B(0)AT2 ::Functions as a sodium-dependent neutral amino acid transporter. Exhibits preference for methionine and for the branched-chain amino acids, particularly leucine, valine and isoleucine. Mediates the saturable, pH-sensitive and electrogenic cotransport of proline and sodium ions with a stoichiometry of 1:1. May have a role as transporter for neurotransmitter precursors into neurons. In contrast to other members of the neurotransmitter transporter family, does not appear to be chloride-dependent.::Mus musculus (taxid: 10090) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::2-449 PF00209::SNF 100.00::2-260 GO:0032328::alanine transport confident hh_2a65_A_2::261-330,334-337,374-378,410-412,415-415,417-449 very confident psy206 78 Q9JMA9::Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) ::Mediates the uptake of a broad range of neutral and cationic amino acids (with the exception of proline) in a Na(+)/Cl(-)-dependent manner.::Mus musculus (taxid: 10090) portable COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 95.87::2-62 PF00209::SNF 98.77::2-61 GO:0042221::response to chemical stimulus confident hh_2a65_A_1::2-62 portable psy5258 252 P23977::Sodium-dependent dopamine transporter ::Amine transporter. Terminates the action of dopamine by its high affinity sodium-dependent reuptake into presynaptic terminals.::Rattus norvegicus (taxid: 10116) portable COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 99.94::2-186 PF00209::SNF 100.00::2-202 GO:0042745::circadian sleep/wake cycle confident hh_2a65_A_1::2-30,33-97,101-126,130-176,180-189 very confident psy5257 295 P23977::Sodium-dependent dopamine transporter ::Amine transporter. Terminates the action of dopamine by its high affinity sodium-dependent reuptake into presynaptic terminals.::Rattus norvegicus (taxid: 10116) portable COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 99.97::22-242 PF00209::SNF 100.00::17-278 GO:0042745::circadian sleep/wake cycle confident hh_2a65_A_1::19-26,28-32,35-106,109-173,177-202,206-252,256-265 very confident psy205 108 O18875::Sodium- and chloride-dependent creatine transporter 1 ::Required for the uptake of creatine. Plays an important role in supplying creatine to the brain via the blood-brain barrier.::Bos taurus (taxid: 9913) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 99.71::63-106 PF00209::SNF 99.61::64-107 GO:0043025::neuronal cell body confident hh_2a65_A_1::63-107 very confident psy234 445 P51905::Sodium-dependent serotonin transporter ::Terminates the action of serotonin by its high affinity sodium-dependent reuptake into presynaptic terminals.::Drosophila melanogaster (taxid: 7227) very confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::2-396 PF00209::SNF 100.00::1-438 GO:0043679::axon terminus very confident hh_2a65_A_1::1-44,50-50,52-54,63-73,75-78,81-226,229-293,296-296,299-323,327-412,416-425 very confident psy11766 248 Q9JMA9::Sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) ::Mediates the uptake of a broad range of neutral and cationic amino acids (with the exception of proline) in a Na(+)/Cl(-)-dependent manner.::Mus musculus (taxid: 10090) confident COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::54-171 PF00209::SNF 100.00::55-248 GO:0045177::apical part of cell confident hh_2a65_A_1::54-176,184-188,198-217,222-222,224-248 very confident psy8107 1613 Q8IVF5::T-lymphoma invasion and metastasis-inducing protein 2 ::Modulates the activity of RHO-like proteins and connects extracellular signals to cytoskeletal activities. Acts as a GDP-dissociation stimulator protein that stimulates the GDP-GTP exchange activity of RHO-like GTPases and activates them. Mediates extracellular laminin signals to activate Rac1, contributing to neurite growth. Involved in lamellipodial formation and advancement of the growth cone of embryonic hippocampal neurons. Promotes migration of neurons in the cerebral cortex. When overexpressed, induces membrane ruffling accompanied by the accumulation of actin filaments along the altered plasma membrane (By similarity). Activates specifically RAC1, but not CDC42 and RHOA.::Homo sapiens (taxid: 9606) portable COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 100.00::840-1306 PF00209::SNF 100.00::841-1305 GO:0050770::regulation of axonogenesis confident hh_1foe_A_1::585-782 very confident psy17277 123 O88576::Sodium-dependent neutral amino acid transporter B(0)AT3 ::Functions as a sodium and chloride-dependent neutral amino acid transporter.::Mus musculus (taxid: 10090) portable COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 99.93::2-123 PF00209::SNF 99.95::4-123 GO:1901700::response to oxygen-containing compound confident hh_2a65_A_1::5-61,65-89,93-123 confident psy16393 121 P31661::Sodium- and chloride-dependent creatine transporter 1 ::Required for the uptake of creatine. Plays an important role in supplying creatine to the brain via the blood-brain barrier.::Oryctolagus cuniculus (taxid: 9986) portable COG0733::Na+-dependent transporters of the SNF family [General function prediction only] 99.92::28-115 PF00209::SNF 99.95::29-118 GO:1901700::response to oxygen-containing compound confident hh_2a65_A_1::28-118 confident psy11241 148 Q61503::5'-nucleotidase ::Hydrolyzes extracellular nucleotides into membrane permeable nucleosides.::Mus musculus (taxid: 10090) portable COG0737::UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] 99.89::6-148 PF09587::PGA_cap 98.60::11-66 GO:0008253::5'-nucleotidase activity confident hh_4h1s_A_1::3-27,29-73,75-88,90-148 very confident psy11244 102 Q61503::5'-nucleotidase ::Hydrolyzes extracellular nucleotides into membrane permeable nucleosides.::Mus musculus (taxid: 10090) portable COG0737::UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] 98.49::27-101 no hit no match GO:0008253::5'-nucleotidase activity confident hh_2z1a_A_1::11-23,25-101 very confident psy853 314 Q9Y115::UNC93-like protein ::::Drosophila melanogaster (taxid: 7227) confident COG0738::FucP Fucose permease [Carbohydrate transport and metabolism] 95.33::191-305 PF05978::UNC-93 100.00::158-311 GO:0005886::plasma membrane confident hh_4aps_A_1::190-264,273-304 portable psy1755 103 P60815::Feline leukemia virus subgroup C receptor-related protein 2 ::Acts as an importer of heme. Also acts as a transporter for a calcium-chelator complex, important for growth and calcium metabolism.::Rattus norvegicus (taxid: 10116) confident COG0738::FucP Fucose permease [Carbohydrate transport and metabolism] 97.00::5-68 PF11700::ATG22 97.65::3-94 GO:0020037::heme binding confident hh_3o7q_A_1::4-25,27-40,42-62 confident psy5228 114 Q2L256::ATP-dependent Clp protease proteolytic subunit ::Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins.::Bordetella avium (strain 197N) (taxid: 360910) confident COG0740::ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 100.00::1-113 PF00574::CLP_protease 100.00::1-113 GO:0005829::cytosol confident hh_3qwd_A_1::1-114 very confident psy18232 486 Q27539::ATP-dependent Clp protease proteolytic subunit 1, mitochondrial ::Clp cleaves peptides in various proteins in a process that requires ATP hydrolysis. Clp may be responsible for a fairly general and central housekeeping function rather than for the degradation of specific substrates.::Caenorhabditis elegans (taxid: 6239) confident COG0740::ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 100.00::44-301 PF00574::CLP_protease 100.00::55-301 GO:0051260::protein homooligomerization confident hh_1tg6_A_1::32-149,208-278,288-305 very confident psy15891 899 P54098::DNA polymerase subunit gamma-1 ::Involved in the replication of mitochondrial DNA. Associates with mitochondrial DNA.::Homo sapiens (taxid: 9606) confident COG0749::PolA DNA polymerase I - 3'-5' exonuclease and polymerase domains [DNA replication, recombination, and repair] 100.00::438-850 PF00476::DNA_pol_A 100.00::433-845 GO:0006261::DNA-dependent DNA replication confident hh_3ikm_A_1::2-73,112-230,232-273,294-342,347-358,360-421,425-427,429-705,707-752,754-895 very confident psy2827 373 Q8K4V4::Sorting nexin-27 ::Involved in endocytic trafficking (By similarity). In T lymphocytes, participates in endocytic recycling pathway. Recruits PSCDBP and HT4R to early endosomes.::Rattus norvegicus (taxid: 10116) confident COG0750::Predicted membrane-associated Zn-dependent proteases 1 [Cell envelope biogenesis, outer membrane] 99.00::48-266 PF00595::PDZ 99.36::11-101 GO:0051641::cellular localization confident hh_3qe1_A_1::6-105 very confident psy2586 125 Q5RF10::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells.::Pongo abelii (taxid: 9601) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 100.00::16-122 PF00199::Catalase 100.00::12-122 GO:0005758::mitochondrial intermembrane space confident hh_2isa_A_1::13-115,117-122 very confident psy12898 64 Q5RF10::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells.::Pongo abelii (taxid: 9601) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 99.96::2-64 PF00199::Catalase 99.76::2-64 GO:0005758::mitochondrial intermembrane space confident hh_2xq1_A_1::2-64 very confident psy2590 504 O62839::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells.::Sus scrofa (taxid: 9823) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 100.00::44-502 PF00199::Catalase 100.00::44-438 GO:0009605::response to external stimulus confident hh_2xq1_A_1::44-52,55-89,126-178,182-190,220-226,230-248,254-267,274-277,314-319,326-447,450-503 very confident psy2585 80 Q9PT92::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.::Danio rerio (taxid: 7955) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 99.96::1-79 PF00199::Catalase 99.85::1-61 GO:0046688::response to copper ion confident hh_2xq1_A_1::1-72,75-77 very confident psy8744 116 Q9PT92::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.::Danio rerio (taxid: 7955) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 100.00::1-116 PF00199::Catalase 99.97::1-116 GO:0046688::response to copper ion confident hh_2xq1_A_1::1-116 very confident psy15197 902 Q5RF10::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells.::Pongo abelii (taxid: 9601) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 100.00::477-902 PF00199::Catalase 100.00::498-837 GO:0055114::oxidation-reduction process confident hh_2isa_A_1::477-807,809-873,875-902 very confident psy8830 70 Q5RF10::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells.::Pongo abelii (taxid: 9601) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 99.43::1-69 PF06628::Catalase-rel 98.96::39-69 GO:0005829::cytosol confident hh_1dgf_A_1::1-50,52-69 very confident psy8829 205 Q5RF10::Catalase ::Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Promotes growth of cells.::Pongo abelii (taxid: 9601) confident COG0753::KatE Catalase [Inorganic ion transport and metabolism] 99.97::66-205 PF06628::Catalase-rel 99.70::40-101 GO:0009605::response to external stimulus confident hh_2isa_A_1::77-112,114-177,179-205 very confident psy2677 157 P54353::Putative peptidyl-prolyl cis-trans isomerase dodo ::::Drosophila melanogaster (taxid: 7227) very confident COG0760::SurA Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones] 99.51::45-157 PF13616::Rotamase_3 99.96::45-157 GO:0030512::negative regulation of transforming growth factor beta receptor signaling pathway very confident hh_3tc5_A_1::1-157 very confident psy6496 122 Q9CWW6::Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 ::Involved as a ribosomal RNA processing factor in ribosome biogenesis. Binds to tightly bent AT-rich stretches of double-stranded DNA.::Mus musculus (taxid: 10090) very confident COG0760::SurA Parvulin-like peptidyl-prolyl isomerase [Posttranslational modification, protein turnover, chaperones] 99.54::25-122 PF13616::Rotamase_3 99.94::24-122 GO:0030684::preribosome very confident hh_3ui4_A_1::26-122 very confident psy5220 286 B4TQA2::Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta ::Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.::Salmonella schwarzengrund (strain CVM19633) (taxid: 439843) very confident COG0777::AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism] 100.00::1-285 PF01039::Carboxyl_trans 100.00::54-282 GO:0005829::cytosol very confident hh_2f9y_B_1::1-10,12-12,14-16,19-285 very confident psy144 254 Q9DCX8::Iodotyrosine dehalogenase 1 ::Catalyzes the oxidative NADPH-dependent deiodination of monoiodotyrosine (L-MIT) or diiodotyrosine (L-DIT). Acts during the hydrolysis of thyroglobulin to liberate iodide, which can then reenter the hormone-producing pathways. Acts more efficiently on monoiodotyrosine than on diiodotyrosine.::Mus musculus (taxid: 10090) very confident COG0778::NfnB Nitroreductase [Energy production and conversion] 99.96::55-253 PF00881::Nitroreductase 99.97::62-232 GO:0055114::oxidation-reduction process confident hh_3gb5_A_1::22-253 very confident psy3490 88 O35430::Amyloid beta A4 precursor protein-binding family A member 1 ::Putative function in synaptic vesicle exocytosis by binding to Munc18-1, an essential component of the synaptic vesicle exocytotic machinery. May modulate processing of the beta-amyloid precursor protein (APP) and hence formation of beta-AAP.::Rattus norvegicus (taxid: 10116) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.82::3-85 PF00595::PDZ 99.73::12-86 GO:0001540::beta-amyloid binding confident hh_3suz_A_1::3-84 very confident psy2533 684 O35889::Afadin ::Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 97.80::100-179 PF00595::PDZ 99.48::93-176 GO:0005737::cytoplasm confident hh_2xkx_A_1::89-100,102-183,206-207,217-236,241-244,269-334 very confident psy14977 469 Q80VW5::Whirlin ::Necessary for elongation and maintenance of inner and outer hair cell stereocilia in the organ of Corti in the inner ear.::Mus musculus (taxid: 10090) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.72::188-300 PF00595::PDZ 99.36::371-443 GO:0005737::cytoplasm confident hh_2qt5_A_1::204-213,216-229,231-277,288-306,316-316,331-332,363-374,376-429,431-443 very confident psy18106 76 O55164::Multiple PDZ domain protein ::Interacts with HTR2C and provokes its clustering at the cell surface. Member of the NMDAR signaling complex that may play a role in control of AMPAR potentiation and synaptic plasticity in excitatory synapses.::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 96.57::31-76 PF00595::PDZ 99.28::25-76 GO:0005794::Golgi apparatus confident hh_2daz_A_1::7-76 very confident psy3479 518 O17583::Protein lin-10 ::Required specifically for the determination of 3 vulval precursor cell fates P5.p, P6.p and P7.p during late second and early third larval stages; required for basolateral localization of receptor tyrosine kinase let-23. Could have a general but redundant role in development, functioning in diverse cell lineages to control cell fates.::Caenorhabditis elegans (taxid: 6239) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.47::66-161 PF00595::PDZ 99.61::65-149 GO:0005886::plasma membrane confident hh_3suz_A_1::4-175,200-205,207-214,218-256 very confident psy3208 144 Q9NB04::Patj homolog ::Involved in cell polarity establishment. Probably participates in the assembly, positioning and maintenance of adherens junctions via its interaction with the SAC complex.::Drosophila melanogaster (taxid: 7227) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.25::6-66 PF00595::PDZ 99.24::6-64 GO:0005912::adherens junction confident hh_2byg_A_1::5-55,57-67 very confident psy16960 69 no hit no match COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.81::10-68 PF00595::PDZ 99.29::11-68 GO:0005912::adherens junction confident hh_2fcf_A_1::27-56,58-67 very confident psy14174 269 A8KBF6::MAGUK p55 subfamily member 7 ::Acts as an important adapter that promotes epithelial cell polarity and tight junction formation. Involved in the assembly of protein complexes at sites of cell-cell contact.::Xenopus tropicalis (taxid: 8364) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.39::143-217 PF00595::PDZ 99.61::137-215 GO:0005923::tight junction confident hh_2xkx_A_1::134-247,250-269 very confident psy12578 172 O88951::Protein lin-7 homolog B ::Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells. Forms membrane-associated multiprotein complexes that may regulate delivery and recycling of proteins to the correct membrane domains. The tripartite complex composed of LIN7 (LIN7A, LIN7B or LIN7C), CASK and APBA1 may have the potential to couple synaptic vesicle exocytosis to cell adhesion in brain. Ensures the proper localization of GRIN2B (subunit 2B of the NMDA receptor) to neuronal postsynaptic density and may function in localizing synaptic vesicles at synapses where it is recruited by beta-catenin and cadherin. Required to localize Kir2 channels, GABA transporter (SLC6A12) and EGFR/ERBB1, ERBB2, ERBB3 and ERBB4 to the basolateral membrane of epithelial cells. May increase the amplitude of ASIC3 acid-evoked currents by stabilizing the channel at the cell surface.::Mus musculus (taxid: 10090) very confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.81::71-147 PF00595::PDZ 99.68::66-145 GO:0005923::tight junction very confident hh_2dkr_A_1::62-149 very confident psy4600 108 Q9QZR8::PDZ domain-containing protein 2 ::::Rattus norvegicus (taxid: 10116) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 97.62::53-107 PF00595::PDZ 99.52::43-107 GO:0005923::tight junction confident hh_2fne_A_1::39-50,53-107 very confident psy12296 433 Q5RBI7::PDZ domain-containing protein 7 ::::Pongo abelii (taxid: 9601) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 99.35::116-298 PF00595::PDZ 99.37::3-73 GO:0005929::cilium confident hh_3gsl_A_1::3-78,83-91,113-115,117-165,167-193 very confident psy16075 241 Q9JK84::Partitioning defective 6 homolog gamma ::Adapter protein involved in asymmetrical cell division and cell polarization processes. May play a role in the formation of epithelial tight junctions. The PARD6-PARD3 complex links GTP-bound Rho small GTPases to atypical protein kinase C proteins.::Mus musculus (taxid: 10090) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.29::2-73 PF00595::PDZ 99.17::2-59 GO:0005938::cell cortex confident hh_1nf3_C_1::3-64 very confident psy12310 201 Q6QGC0::PDZ and LIM domain protein 3 ::May play a role in the organization of actin filament arrays within muscle cells.::Sus scrofa (taxid: 9823) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 99.35::50-197 PF00595::PDZ 99.61::41-120 GO:0015629::actin cytoskeleton confident hh_1vb7_A_1::49-125 very confident psy12206 164 Q92796::Disks large homolog 3 ::Required for learning most likely through its role in synaptic plasticity following NMDA receptor signaling.::Homo sapiens (taxid: 9606) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 97.30::45-106 PF00595::PDZ 99.25::44-106 GO:0016328::lateral plasma membrane confident hh_2xkx_A_1::38-164 very confident psy337 255 Q62915::Peripheral plasma membrane protein CASK ::Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoring and ion channel trafficking. Contributes to neural development and regulation of gene expression via interaction with the transcription factor TRB1. Binds to cell-surface proteins, including amyloid precursor protein, neurexins, and syndecans. May mediate a link between the extracellular matrix and the actin cytoskeleton via its interaction with syndecan and with the actin/spectrin-binding protein 4.1.::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 97.89::113-171 PF00595::PDZ 99.44::97-171 GO:0016363::nuclear matrix confident hh_1kwa_A_1::94-103,113-171 very confident psy5188 109 P70271::PDZ and LIM domain protein 4 ::::Mus musculus (taxid: 10090) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.61::38-109 PF00595::PDZ 99.60::30-108 GO:0043234::protein complex confident hh_1vb7_A_1::29-109 very confident psy795 109 Q09506::Uncharacterized protein C45G9.7 ::::Caenorhabditis elegans (taxid: 6239) very confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.93::13-105 PF00595::PDZ 99.62::21-102 GO:0043234::protein complex confident hh_2vz5_A_1::22-107 very confident psy4596 439 Q14160::Protein scribble homolog ::Scaffold protein involved in different aspects of polarized cells differentiation regulating epithelial and neuronal morphogenesis. Most probably functions in the establishment of apico-basal cell polarity. May function in cell proliferation regulating progression from G1 to S phase and as a positive regulator of apoptosis for instance during acinar morphogenesis of the mammary epithelium. May also function in cell migration and adhesion and hence regulate cell invasion through MAPK signaling. May play a role in exocytosis and in the targeting synaptic vesicles to synapses. Functions as an activator of Rac GTPase activity.::Homo sapiens (taxid: 9606) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.15::265-349 PF00595::PDZ 99.46::259-347 GO:0043234::protein complex confident hh_1uju_A_1::252-352 very confident psy1521 175 Q8NI35::InaD-like protein ::Scaffolding protein that may bring different proteins into adjacent positions at the cell membrane. May regulate protein targeting, cell polarity and integrity of tight junctions. May regulate the surface expression and/or function of ASIC3 in sensory neurons.::Homo sapiens (taxid: 9606) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.65::44-94 PF00595::PDZ 99.35::43-94 GO:0043234::protein complex confident hh_3gsl_A_1::2-94 very confident psy6405 548 O54824::Pro-interleukin-16 ::Isoform 2 is involved in cell cycle progression in T-cells. Appears to be involved in transcriptional regulation of SKP2 and is probably part of a transcriptional repression complex on the core promoter of the SKP2 gene. May act as a scaffold for GABPB1 (the DNA-binding subunit the GABP transcription factor complex) and HDAC3 thus maintaining transcriptional repression and blocking cell cycle progression in resting T-cells.::Mus musculus (taxid: 10090) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 99.18::12-223 PF00595::PDZ 99.16::53-133 GO:0044444::cytoplasmic part confident hh_3gsl_A_1::48-59,62-203,205-217 very confident psy6070 1454 Q9QZR8::PDZ domain-containing protein 2 ::::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 97.93::1314-1393 PF00595::PDZ 99.41::1305-1390 GO:0044444::cytoplasmic part confident hh_2xkx_A_1::1302-1312,1315-1327,1332-1381,1383-1414,1421-1433 very confident psy8436 306 Q9QZR8::PDZ domain-containing protein 2 ::::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.61::14-91 PF00595::PDZ 99.75::7-89 GO:0044444::cytoplasmic part confident hh_2xkx_A_1::3-14,16-95,219-230,233-299 very confident psy1156 671 Q9QZR8::PDZ domain-containing protein 2 ::::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.15::587-666 PF00595::PDZ 99.44::578-663 GO:0044444::cytoplasmic part confident hh_3gsl_A_1::387-397,400-482,575-585,588-654,656-668 very confident psy16403 177 Q9P227::Rho GTPase-activating protein 23 ::GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.::Homo sapiens (taxid: 9606) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.78::44-133 PF00595::PDZ 99.49::26-130 GO:0044699::single-organism process confident hh_2yuy_A_1::19-33,36-64,66-134 very confident psy6995 342 O43166::Signal-induced proliferation-associated 1-like protein 1 ::Stimulates the GTPase activity of RAP2A. Promotes reorganization of the actin cytoskeleton and recruits DLG4 to F-actin. Contributes to the regulation of dendritic spine morphogenesis.::Homo sapiens (taxid: 9606) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 97.86::232-323 PF00595::PDZ 99.28::251-320 GO:0044763::single-organism cellular process confident hh_1vb7_A_1::245-254,257-323 confident psy10428 309 Q920G2::Na(+)/H(+) exchange regulatory cofactor NHE-RF2 ::Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression. Necessary for cAMP-mediated phosphorylation and inhibition of SLC9A3. May also act as scaffold protein in the nucleus.::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.13::19-93 PF00595::PDZ 99.34::11-87 GO:0045177::apical part of cell confident bp_2kjd_A_1::10-19,22-103,109-118 very confident psy4897 774 Q99L88::Beta-1-syntrophin ::Adapter protein that binds to and probably organizes the subcellular localization of a variety of membrane proteins. May link various receptors to the actin cytoskeleton and the dystrophin glycoprotein complex.::Mus musculus (taxid: 10090) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.01::30-105 PF00595::PDZ 99.51::23-103 GO:0045202::synapse confident rp_1z87_A_1::108-160,165-357 very confident psy4487 315 Q9JIS1::Regulating synaptic membrane exocytosis protein 2 ::Rab effector involved in exocytosis. May act as scaffold protein.::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.03::112-192 PF00595::PDZ 99.51::99-189 GO:0045202::synapse confident hh_1wfg_A_1::77-193 very confident psy12579 138 O88951::Protein lin-7 homolog B ::Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells. Forms membrane-associated multiprotein complexes that may regulate delivery and recycling of proteins to the correct membrane domains. The tripartite complex composed of LIN7 (LIN7A, LIN7B or LIN7C), CASK and APBA1 may have the potential to couple synaptic vesicle exocytosis to cell adhesion in brain. Ensures the proper localization of GRIN2B (subunit 2B of the NMDA receptor) to neuronal postsynaptic density and may function in localizing synaptic vesicles at synapses where it is recruited by beta-catenin and cadherin. Required to localize Kir2 channels, GABA transporter (SLC6A12) and EGFR/ERBB1, ERBB2, ERBB3 and ERBB4 to the basolateral membrane of epithelial cells. May increase the amplitude of ASIC3 acid-evoked currents by stabilizing the channel at the cell surface.::Mus musculus (taxid: 10090) very confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.49::40-113 PF00595::PDZ 99.67::32-111 GO:0045211::postsynaptic membrane very confident hh_2dkr_A_1::27-115 very confident psy10226 208 Q5PYH5::Discs large homolog 1-like protein ::May play a role in synapse assembly and function.::Danio rerio (taxid: 7955) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.15::18-102 PF00595::PDZ 99.63::17-99 GO:0045211::postsynaptic membrane confident hh_3gsl_A_1::11-131 very confident psy12207 69 Q5PYH7::Disks large homolog 2 ::May play a role in synapse assembly and function.::Danio rerio (taxid: 7955) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.01::11-60 PF00595::PDZ 99.32::3-60 GO:0045211::postsynaptic membrane very confident hh_2byg_A_1::3-60 very confident psy1030 114 P51140::Segment polarity protein dishevelled ::Required to establish coherent arrays of polarized cells and segments in embryos. Plays a role in wingless (wg) signaling, possibly through the reception of the wg signal by target cells and subsequent redistribution of arm protein in response to that signal in embryos. This signal seems to be required to establish planar cell polarity and identity.::Drosophila melanogaster (taxid: 7227) very confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.41::1-69 PF00595::PDZ 99.22::1-53 GO:0070300::phosphatidic acid binding very confident hh_3cbz_A_1::1-62 very confident psy18026 246 P51140::Segment polarity protein dishevelled ::Required to establish coherent arrays of polarized cells and segments in embryos. Plays a role in wingless (wg) signaling, possibly through the reception of the wg signal by target cells and subsequent redistribution of arm protein in response to that signal in embryos. This signal seems to be required to establish planar cell polarity and identity.::Drosophila melanogaster (taxid: 7227) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.54::45-141 PF00595::PDZ 99.64::38-123 GO:0070300::phosphatidic acid binding very confident hh_2jre_A_1::33-111,115-125 very confident psy1022 245 Q05AS8::Segment polarity protein dishevelled homolog DVL-2 ::Involved in at least 2 independent signaling cascades, controlling cell fate via canonical Wnt signaling and cell polarity via a planar cell polarity (PCP) cascade. Acts synergistically with dal/dapple-like to activate Wnt signaling, stabilizing ctnnb1/beta-catenin and leading to dorsal axis formation. Also prevents degradation of ctnnb1/beta-catenin by displacing gsk3 from a complex with ARP/Axin-related protein. Has an additional role in anterior-posterior (A/P) axis formation, specifying different neuroectodermal cell fates along the A/P axis in a dose-dependent manner by activating several early patterning genes. In the PCP pathway, required at the cell membrane for PCP-mediated neural and mesodermal convergent extension during gastrulation and subsequent neural tube closure, acting to activate jnk. Also involved in blastopore closure and archenteron elongation during early, but not late, gastrulation. Associates with ephrin receptors and ligands and acts as part of a downstream PCP pathway to mediate ephrin-mediated cell repulsion via activation of rhoa. Required for efnb1/ephrin-B1-driven movement of non-retinal progenitor cells into the retina during eye field formation. Patterns the hindbrain. Required for ciliogenesis. Controls the docking of basal bodies to the apical plasma membrane; mediates the activation, but not localization of rhoa at the apical surface of ciliated cells during basal body docking. Furthermore, required for the association of basal bodies with membrane-bound vesicles and the vesicle-trafficking protein exoc4/sec8, and this association is in turn required for basal body docking. Once basal bodies are docked, required for the planar polarization of basal bodies that underlies ciliary beating and the directional fluid flow across ciliated epithelia.::Xenopus tropicalis (taxid: 8364) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.57::45-151 PF00595::PDZ 99.64::38-123 GO:0070300::phosphatidic acid binding very confident hh_3cbz_A_1::33-132 very confident psy7774 173 Q8TDM6::Disks large homolog 5 ::May play a role at the plasma membrane in the maintenance of the structure of epithelial cells and in the transmission of extracellular signals to the membrane and cytoskeleton.::Homo sapiens (taxid: 9606) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.74::99-171 PF00595::PDZ 99.69::92-169 GO:0071944::cell periphery confident hh_2ehr_A_1::86-172 very confident psy5022 359 O17583::Protein lin-10 ::Required specifically for the determination of 3 vulval precursor cell fates P5.p, P6.p and P7.p during late second and early third larval stages; required for basolateral localization of receptor tyrosine kinase let-23. Could have a general but redundant role in development, functioning in diverse cell lineages to control cell fates.::Caenorhabditis elegans (taxid: 6239) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 97.87::295-358 PF00640::PID 99.93::31-167 GO:0005886::plasma membrane confident hh_4dbb_A_1::22-60,62-117,128-175,177-191 very confident psy12108 665 Q61085::Rhophilin-1 ::Has no enzymatic activity. May serve as a target for Rho, and interact with some cytoskeletal component upon Rho binding or relay a Rho signal to other molecules.::Mus musculus (taxid: 10090) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.76::497-601 PF03097::BRO1 100.00::116-518 GO:0050789::regulation of biological process confident hh_1zb1_A_1::114-241,245-311,315-373,410-454,462-519 very confident psy5713 81 A2RUV4::Rho GTPase-activating protein 21 ::GTPase-activating protein (GAP) for rhoa and cdc42.::Xenopus tropicalis (taxid: 8364) confident COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.94::6-65 PF13180::PDZ_2 99.54::6-68 GO:0005856::cytoskeleton confident hh_2yuy_A_1::5-67 very confident psy2263 232 Q9JI92::Syntenin-1 ::Seems to function as an adapter protein. In adherens junctions may function to couple syndecans to cytoskeletal proteins or signaling components. Seems to couple transcription factor SOX4 to the IL-5 receptor (IL5RA). May also play a role in vesicular trafficking. Seems to be required for the targeting of TGFA to the cell surface in the early secretory pathway.::Rattus norvegicus (taxid: 10116) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.90::22-108 PF13180::PDZ_2 99.52::27-106 GO:0008022::protein C-terminus binding confident hh_1w9e_A_1::14-115,164-224 very confident psy12583 96 Q9CR00::26S proteasome non-ATPase regulatory subunit 9 ::Acts as a chaperone during the assembly of the 26S proteasome, specifically of the base subcomplex of the PA700/19S regulatory complex (RC). During the base subcomplex assembly is part of an intermediate PSMD9:PSMC6:PSMC3 module, also known as modulator trimer complex; PSMD9 is released during the further base assembly process.::Mus musculus (taxid: 10090) portable COG0793::Prc Periplasmic protease [Cell envelope biogenesis, outer membrane] 98.60::8-75 PF13180::PDZ_2 99.48::8-74 GO:0044424::intracellular part confident hh_2fcf_A_1::8-14,19-39,41-54,56-65 confident psy8849 112 P44471::Ribosomal silencing factor RsfS ::::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) confident COG0799::Uncharacterized homolog of plant Iojap protein [Function unknown] 100.00::1-110 PF02410::Oligomerisation 100.00::6-104 GO:0017148::negative regulation of translation confident hh_2id1_A_1::1-110 very confident psy17648 530 Q6DIV6::Vesicular inhibitory amino acid transporter ::Involved in the uptake of GABA and glycine into the synaptic vesicles.::Xenopus tropicalis (taxid: 8364) confident COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.98::118-517 PF01490::Aa_trans 100.00::121-517 GO:0007632::visual behavior very confident hh_4djk_A_1::117-138,141-146,148-180,182-182,184-185,193-206,208-415,419-428,430-447,451-467,470-486 confident psy12819 675 Q7Z2H8::Proton-coupled amino acid transporter 1 ::Neutral amino acid/proton symporter. Has a pH-dependent electrogenic transport activity for small amino acids such as glycine, alanine and proline. Besides small apolar L-amino acids, it also recognize their D-enantiomers and selected amino acid derivatives such as gamma-aminobutyric acid.::Homo sapiens (taxid: 9606) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.93::12-397 PF01490::Aa_trans 100.00::16-398 GO:0008324::cation transmembrane transporter activity confident hh_3l1l_A_2::429-464,466-503 portable psy15185 611 Q924A5::Proton-coupled amino acid transporter 1 ::Neutral amino acid/proton symporter. Probably involved in the efflux of lysosomal proteolysis products such as L-proline, L-alanine and glycine from the cell. May play a role in specifying sites for exocytosis in neurons.::Rattus norvegicus (taxid: 10116) confident COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.97::127-476 PF01490::Aa_trans 100.00::129-476 GO:0008324::cation transmembrane transporter activity confident hh_3l1l_A_1::128-162,164-191,197-208,219-267,269-358,362-388 confident psy4519 236 Q495M3::Proton-coupled amino acid transporter 2 ::Involved in a pH-dependent electrogenic neuronal transport and sequestration of small amino acids. Transports glycine and proline. Inhibited by sarcosine.::Homo sapiens (taxid: 9606) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.42::112-235 PF01490::Aa_trans 99.69::115-236 GO:0015808::L-alanine transport confident hh_3gia_A_1::114-147,149-171 portable psy16922 75 Q4V8B1::Proton-coupled amino acid transporter 3 ::::Rattus norvegicus (taxid: 10116) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 98.49::5-74 PF01490::Aa_trans 99.50::5-74 GO:0015808::L-alanine transport confident hh_4djk_A_1::6-30,34-60 confident psy9719 248 Q4V8B1::Proton-coupled amino acid transporter 3 ::::Rattus norvegicus (taxid: 10116) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 98.63::65-229 PF01490::Aa_trans 99.92::23-229 GO:0015808::L-alanine transport confident hh_4djk_A_1::165-173,176-196 portable psy14213 302 Q6YBV0::Proton-coupled amino acid transporter 4 ::Functions as a sodium-independent electroneutral transporter for tryptophan, proline and alanine. Inhibited by sarcosine.::Homo sapiens (taxid: 9606) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.27::84-291 PF01490::Aa_trans 99.96::69-292 GO:0015808::L-alanine transport confident hh_4djk_A_1::97-114,118-143 portable psy4524 929 Q7Z2H8::Proton-coupled amino acid transporter 1 ::Neutral amino acid/proton symporter. Has a pH-dependent electrogenic transport activity for small amino acids such as glycine, alanine and proline. Besides small apolar L-amino acids, it also recognize their D-enantiomers and selected amino acid derivatives such as gamma-aminobutyric acid.::Homo sapiens (taxid: 9606) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.93::61-464 PF01490::Aa_trans 100.00::60-523 GO:0015808::L-alanine transport confident hh_3l1l_A_1::595-631,633-658,664-677,688-730,732-827,831-857 confident psy16729 238 Q924A5::Proton-coupled amino acid transporter 1 ::Neutral amino acid/proton symporter. Probably involved in the efflux of lysosomal proteolysis products such as L-proline, L-alanine and glycine from the cell. May play a role in specifying sites for exocytosis in neurons.::Rattus norvegicus (taxid: 10116) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.36::2-196 PF01490::Aa_trans 99.97::1-197 GO:0015808::L-alanine transport confident hh_4djk_A_1::3-26,30-88 portable psy14360 471 Q924A5::Proton-coupled amino acid transporter 1 ::Neutral amino acid/proton symporter. Probably involved in the efflux of lysosomal proteolysis products such as L-proline, L-alanine and glycine from the cell. May play a role in specifying sites for exocytosis in neurons.::Rattus norvegicus (taxid: 10116) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.62::3-268 PF01490::Aa_trans 100.00::2-270 GO:0015808::L-alanine transport confident hh_4djk_A_1::100-131,135-172,174-207 portable psy16921 235 Q924A5::Proton-coupled amino acid transporter 1 ::Neutral amino acid/proton symporter. Probably involved in the efflux of lysosomal proteolysis products such as L-proline, L-alanine and glycine from the cell. May play a role in specifying sites for exocytosis in neurons.::Rattus norvegicus (taxid: 10116) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.59::1-234 PF01490::Aa_trans 99.91::1-234 GO:0015808::L-alanine transport confident hh_4djk_A_1::160-189,193-221 portable psy1701 270 Q924A5::Proton-coupled amino acid transporter 1 ::Neutral amino acid/proton symporter. Probably involved in the efflux of lysosomal proteolysis products such as L-proline, L-alanine and glycine from the cell. May play a role in specifying sites for exocytosis in neurons.::Rattus norvegicus (taxid: 10116) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.62::49-256 PF01490::Aa_trans 100.00::49-257 GO:0015808::L-alanine transport confident hh_4djk_A_1::54-83,86-179,182-203,206-225 portable psy14877 221 Q3USY0::Putative sodium-coupled neutral amino acid transporter 11 ::Putative sodium-dependent amino acid/proton antiporter.::Mus musculus (taxid: 10090) portable COG0814::SdaC Amino acid permeases [Amino acid transport and metabolism] 99.60::2-191 PF01490::Aa_trans 99.97::1-191 GO:0044464::cell part confident hh_4djk_A_1::2-23,25-55 portable psy9577 354 Q21W25::Dual-specificity RNA methyltransferase RlmN ::Specifically methylates position 2 of adenine 2503 in 23S rRNA.::Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) (taxid: 338969) very confident COG0820::Predicted Fe-S-cluster redox enzyme [General function prediction only] 100.00::1-353 PF04055::Radical_SAM 99.56::104-286 GO:0000049::tRNA binding confident hh_3rfa_A_1::1-147,153-257,259-288,293-352 very confident psy17091 1250 Q13X32::GTPase Der ::GTPase that plays an essential role in the late steps of ribosome biogenesis.::Burkholderia xenovorans (strain LB400) (taxid: 266265) confident COG0820::Predicted Fe-S-cluster redox enzyme [General function prediction only] 100.00::528-872 PF13393::tRNA-synt_His 100.00::835-1125 GO:0043234::protein complex confident hh_4e51_A_1::819-848,850-865,867-884,886-1002,1005-1137,1139-1244 very confident psy10992 179 O49627::Iron-sulfur cluster assembly protein 1 ::Involved in iron homeostasis within the mitochondrion where it is involved in the assembly of iron-sulfur proteins. Essential for de novo biosynthesis of mitochondrial iron sulfur proteins. Involved in the assembly or repair of the [Fe-S] clusters present in iron-sulfur proteins.::Arabidopsis thaliana (taxid: 3702) very confident COG0822::IscU NifU homolog involved in Fe-S cluster formation [Energy production and conversion] 100.00::44-174 PF01592::NifU_N 100.00::49-173 GO:0005829::cytosol very confident hh_3lvl_A_1::48-174 very confident psy7767 200 Q5AZ42::Probable dipeptidyl peptidase 4 ::Extracellular dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG0823::TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] 98.94::64-175 PF00930::DPPIV_N 99.92::63-200 GO:0005576::extracellular region confident hh_4a5s_A_1::55-61,64-190 very confident psy14259 79 Q9Z218::Dipeptidyl aminopeptidase-like protein 6 ::May be involved in the physiological processes of brain function. Has no dipeptidyl aminopeptidase activity. May modulate the cell surface expression and the activity of the potassium channel KCND2.::Mus musculus (taxid: 10090) portable COG0823::TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] 93.26::26-64 PF00930::DPPIV_N 99.76::5-78 GO:0008239::dipeptidyl-peptidase activity confident hh_1xfd_A_1::7-49,51-79 very confident psy3287 122 Q80YA7::Dipeptidyl peptidase 8 ::Dipeptidyl peptidase that cleaves off N-terminal dipeptides from proteins having a Pro or Ala residue at position 2. May play a role in T-cell activation and immune function.::Mus musculus (taxid: 10090) portable COG0823::TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] 94.40::22-119 PF00930::DPPIV_N 99.88::28-121 GO:0044424::intracellular part confident hh_1xfd_A_1::28-62,69-97,102-119 very confident psy14492 318 Q0KCA7::Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha ::Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.::Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) very confident COG0825::AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] 100.00::2-269 PF01039::Carboxyl_trans 100.00::62-303 GO:0009329::acetate CoA-transferase complex confident hh_2f9i_A_1::2-269 very confident psy14493 318 Q0KCA7::Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha ::Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.::Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) very confident COG0825::AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism] 100.00::2-269 PF01039::Carboxyl_trans 100.00::62-303 GO:0009329::acetate CoA-transferase complex confident hh_2f9y_A_1::1-269 very confident psy15221 70 Q7VWM3::30S ribosomal protein S21 ::::Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) (taxid: 257313) very confident COG0828::RpsU Ribosomal protein S21 [Translation, ribosomal structure and biogenesis] 99.93::1-66 PF01165::Ribosomal_S21 99.73::2-58 GO:0022627::cytosolic small ribosomal subunit very confident hh_3r8n_U_1::4-53 very confident psy6067 584 Q8W4K3::Cationic amino acid transporter 4, vacuolar ::Permease involved in the transport of the cationic amino acids.::Arabidopsis thaliana (taxid: 3702) confident COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 100.00::31-576 PF00324::AA_permease 100.00::41-432 GO:0000064::L-ornithine transmembrane transporter activity confident hh_3gia_A_1::32-62,64-131,139-152,154-155,167-227,243-376,378-378,380-432 very confident psy9213 378 Q9QXW9::Large neutral amino acids transporter small subunit 2 ::Sodium-independent, high-affinity transport of small and large neutral amino acids such as alanine, serine, threonine, cysteine, phenylalanine, tyrosine, leucine, arginine and tryptophan, when associated with SLC3A2/4F2hc. Acts as an amino acid exchanger. Has higher affinity for L-phenylalanine than LAT1 but lower affinity for glutamine and serine. L-alanine is transported at physiological concentrations. Plays a role in basolateral (re)absorption of neutral amino acids. Involved in the uptake of methylmercury (MeHg) when administered as the L-cysteine or D,L-homocysteine complexes, and hence plays a role in metal ion homeostasis and toxicity. Involved in the cellular activity of small molecular weight nitrosothiols, via the stereoselective transport of L-nitrosocysteine (L-CNSO) across the transmembrane. Plays an essential role in the reabsorption of neutral amino acids from the epithelial cells to the bloodstream in the kidney.::Mus musculus (taxid: 10090) portable COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 100.00::3-321 PF00324::AA_permease 100.00::5-262 GO:0005856::cytoskeleton confident hh_4djk_A_1::2-65,67-196,198-282 very confident psy9205 220 Q9QXW9::Large neutral amino acids transporter small subunit 2 ::Sodium-independent, high-affinity transport of small and large neutral amino acids such as alanine, serine, threonine, cysteine, phenylalanine, tyrosine, leucine, arginine and tryptophan, when associated with SLC3A2/4F2hc. Acts as an amino acid exchanger. Has higher affinity for L-phenylalanine than LAT1 but lower affinity for glutamine and serine. L-alanine is transported at physiological concentrations. Plays a role in basolateral (re)absorption of neutral amino acids. Involved in the uptake of methylmercury (MeHg) when administered as the L-cysteine or D,L-homocysteine complexes, and hence plays a role in metal ion homeostasis and toxicity. Involved in the cellular activity of small molecular weight nitrosothiols, via the stereoselective transport of L-nitrosocysteine (L-CNSO) across the transmembrane. Plays an essential role in the reabsorption of neutral amino acids from the epithelial cells to the bloodstream in the kidney.::Mus musculus (taxid: 10090) confident COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 99.94::2-181 PF00324::AA_permease 99.89::1-151 GO:0016021::integral to membrane confident hh_4djk_A_1::1-205 confident psy6063 108 B3TP03::Low affinity cationic amino acid transporter 2 ::Low-affinity, high capacity permease involved in the transport of the cationic amino acids (arginine, lysine and ornithine).::Gallus gallus (taxid: 9031) confident COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 99.08::51-107 PF00324::AA_permease 97.29::60-108 GO:0071011::precatalytic spliceosome confident hh_3l1l_A_1::50-82,85-108 confident psy5069 113 Q8MH63::Putative L-type amino acid transporter 1-like protein MLAS ::::Homo sapiens (taxid: 9606) confident COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 99.07::49-112 PF13520::AA_permease_2 98.12::54-112 GO:0003333::amino acid transmembrane transport confident hh_3l1l_A_1::49-79,81-86,89-112 very confident psy9216 125 Q9Z127::Large neutral amino acids transporter small subunit 1 ::Sodium-independent, high-affinity transport of large neutral amino acids such as phenylalanine, tyrosine, leucine, arginine and tryptophan, when associated with SLC3A2/4F2hc. Involved in cellular amino acid uptake. Acts as an amino acid exchanger. Involved in the transport of L-DOPA across the blood-brain barrier, and that of thyroid hormones triiodothyronine (T3) and thyroxine (T4) across the cell membrane. Plays a role in neuronal cell proliferation (neurogenesis) in brain. Involved in the uptake of methylmercury (MeHg) when administered as the L-cysteine or D,L-homocysteine complexes, and hence plays a role in metal ion homeostasis and toxicity. Involved in the cellular activity of small molecular weight nitrosothiols, via the stereoselective transport of L-nitrosocysteine (L-CNSO) across the transmembrane. Mediates blood-to-retina L-leucine transport across the inner blood-retinal barrier which in turn may play a key role in maintaining large neutral amino acids as well as neurotransmitters in the neural retina. Acts as the major transporter of tyrosine in fibroblasts.::Mus musculus (taxid: 10090) confident COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 99.41::41-123 PF13520::AA_permease_2 99.04::46-124 GO:0003333::amino acid transmembrane transport confident hh_3gia_A_1::41-78,81-113,115-124 very confident psy7925 472 Q9QXW9::Large neutral amino acids transporter small subunit 2 ::Sodium-independent, high-affinity transport of small and large neutral amino acids such as alanine, serine, threonine, cysteine, phenylalanine, tyrosine, leucine, arginine and tryptophan, when associated with SLC3A2/4F2hc. Acts as an amino acid exchanger. Has higher affinity for L-phenylalanine than LAT1 but lower affinity for glutamine and serine. L-alanine is transported at physiological concentrations. Plays a role in basolateral (re)absorption of neutral amino acids. Involved in the uptake of methylmercury (MeHg) when administered as the L-cysteine or D,L-homocysteine complexes, and hence plays a role in metal ion homeostasis and toxicity. Involved in the cellular activity of small molecular weight nitrosothiols, via the stereoselective transport of L-nitrosocysteine (L-CNSO) across the transmembrane. Plays an essential role in the reabsorption of neutral amino acids from the epithelial cells to the bloodstream in the kidney.::Mus musculus (taxid: 10090) portable COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 99.91::3-422 PF13520::AA_permease_2 99.88::28-425 GO:0015171::amino acid transmembrane transporter activity confident hh_4djk_A_1::33-131,315-340,342-426 confident psy6064 568 B3TP03::Low affinity cationic amino acid transporter 2 ::Low-affinity, high capacity permease involved in the transport of the cationic amino acids (arginine, lysine and ornithine).::Gallus gallus (taxid: 9031) confident COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 100.00::82-536 PF13520::AA_permease_2 100.00::87-442 GO:0015181::arginine transmembrane transporter activity confident hh_4djk_A_1::79-102,105-110,114-140,142-247,255-255,259-386,388-442 very confident psy9206 190 Q8MH63::Putative L-type amino acid transporter 1-like protein MLAS ::::Homo sapiens (taxid: 9606) confident COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 99.82::25-175 PF13520::AA_permease_2 99.70::30-186 GO:0050896::response to stimulus confident hh_3l1l_A_1::24-54,56-62,65-118,120-138,140-145,147-163,165-170,173-185 very confident psy799 209 P82251::B(0,+)-type amino acid transporter 1 ::Involved in the high-affinity, sodium-independent transport of cystine and neutral and dibasic amino acids (system b(0,+)-like activity). Thought to be responsible for the high-affinity reabsorption of cystine in the kidney tubule.::Homo sapiens (taxid: 9606) portable COG0833::LysP Amino acid transporters [Amino acid transport and metabolism] 99.06::25-82 PF13520::AA_permease_2 99.19::2-82 GO:0071702::organic substance transport confident hh_4djk_A_1::2-69,71-82 confident psy13439 261 Q03391::Glutamate receptor ionotropic, NMDA 2D ::NMDA receptor subtype of glutamate-gated ion channels possesses high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine.::Mus musculus (taxid: 10090) portable COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 97.99::30-86 PF00060::Lig_chan 99.66::187-260 GO:0035235::ionotropic glutamate receptor signaling pathway confident hh_3kg2_A_1::9-107,109-127,172-210,212-260 very confident psy936 344 P23818::Glutamate receptor 1 ::Ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate.::Mus musculus (taxid: 10090) portable COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 97.90::52-194 PF00060::Lig_chan 99.65::204-312 GO:0043234::protein complex confident hh_3kg2_A_1::46-59,66-66,68-147,171-330 very confident psy17442 90 Q24418::Glutamate [NMDA] receptor subunit 1 ::NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors. Plays a role in associative learning and in long-term memory consolidation.::Drosophila melanogaster (taxid: 7227) confident COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 99.39::3-89 PF00497::SBP_bac_3 99.51::4-89 GO:0042331::phototaxis confident hh_1pb7_A_1::4-89 very confident psy12229 444 P39087::Glutamate receptor ionotropic, kainate 2 ::Ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. May be involved in the transmission of light information from the retina to the hypothalamus. Modulates cell surface expression of NETO2.::Mus musculus (taxid: 10090) portable COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 99.61::4-410 PF00497::SBP_bac_3 99.86::7-409 GO:0043195::terminal bouton confident hh_3kg2_A_1::4-106,108-180,189-264,299-328,332-395,403-410,414-420 very confident psy1412 504 P42260::Glutamate receptor ionotropic, kainate 2 ::Ionotropic glutamate receptor. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. May be involved in the transmission of light information from the retina to the hypothalamus. Modulates cell surface expression of NETO2.::Rattus norvegicus (taxid: 10116) portable COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 99.66::134-493 PF00497::SBP_bac_3 99.86::138-493 GO:0043195::terminal bouton confident hh_1yae_A_1::129-264,288-290,333-333,350-352,359-493,496-502 very confident psy2802 74 P42262::Glutamate receptor 2 ::Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate.::Homo sapiens (taxid: 9606) confident COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 96.57::12-70 PF00497::SBP_bac_3 97.29::12-71 GO:0043195::terminal bouton confident hh_3kg2_A_1::1-74 very confident psy10096 125 Q01812::Glutamate receptor ionotropic, kainate 4 ::Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds kainate > quisqualate > glutamate >> AMPA.::Rattus norvegicus (taxid: 10116) confident COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 95.28::19-93 PF00497::SBP_bac_3 96.86::19-92 GO:0043195::terminal bouton confident bp_1yae_A_1::2-74 very confident psy2313 62 Q8TCU5::Glutamate receptor ionotropic, NMDA 3A ::NMDA receptor subtype of glutamate-gated ion channels with reduced single-channel conductance, low calcium permeability and low voltage-dependent sensitivity to magnesium. Mediated by glycine. May play a role in the development of dendritic spines. May play a role in PPP2CB-NMDAR mediated signaling mechanism.::Homo sapiens (taxid: 9606) portable COG0834::HisJ ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms] 98.17::1-62 PF10613::Lig_chan-Glu_bd 99.69::1-46 GO:0043195::terminal bouton confident hh_1yae_A_1::1-31,34-62 very confident psy1567 463 Q9ZU35::ABC transporter G family member 7 ::::Arabidopsis thaliana (taxid: 3702) portable COG0842::ABC-type multidrug transport system, permease component [Defense mechanisms] 98.13::282-463 PF01061::ABC2_membrane 99.77::272-462 GO:0031410::cytoplasmic vesicle confident no hit no match psy17042 261 Q8T674::ABC transporter G family member 20 ::::Dictyostelium discoideum (taxid: 44689) portable COG0842::ABC-type multidrug transport system, permease component [Defense mechanisms] 99.75::67-255 PF12698::ABC2_membrane_3 99.74::4-256 GO:0005886::plasma membrane confident hh_3cni_A_1::3-47,49-71,73-75,77-87 portable psy2379 585 P0ABI9::Ubiquinol oxidase subunit 1 ::Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration. This ubiquinol oxidase shows proton pump activity across the membrane in addition to the electron transfer.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) very confident COG0843::CyoB Heme/copper-type cytochrome/quinol oxidases, subunit 1 [Energy production and conversion] 100.00::1-539 PF00115::COX1 100.00::2-438 GO:0005507::copper ion binding very confident hh_1fft_A_1::2-584 very confident psy12429 268 Q9VK34::NAD-dependent histone deacetylase Sir2 ::NAD-dependent histone deacetylase involved in heterochromatic silencing. Mildly suppresses the heterochromatin-mediated silencing phenomenon known as position-effect variegation (PEV). Required for epigenetic silencing of the polycomb group proteins. Has histone H4 deacetylase activity in vitro. Required maternally for establishing proper segmentation of the embryo. Involved in sex determination. May be involved in the regulation of life span.::Drosophila melanogaster (taxid: 7227) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::2-193 PF02146::SIR2 100.00::2-146 GO:0000785::chromatin confident hh_2hjh_A_1::2-74,77-193,196-199 very confident psy8970 258 Q9VH08::NAD-dependent protein deacetylase Sirt6 ::NAD-dependent protein deacetylase (By similarity). May be involved in the regulation of life span.::Drosophila melanogaster (taxid: 7227) very confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::34-240 PF02146::SIR2 100.00::52-217 GO:0005654::nucleoplasm confident hh_3pki_A_1::2-256 very confident psy10043 504 Q0P595::NAD-dependent protein deacetylase sirtuin-7 ::NAD-dependent protein deacetylase. Required to restore the transcription of ribosomal RNA (rRNA) at the exit from mitosis. Promotes the association of RNA polymerase I with the rDNA promoter region and coding region. Stimulates transcription activity of the RNA polymerase I complex.::Bos taurus (taxid: 9913) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::40-384 PF02146::SIR2 100.00::58-288 GO:0005731::nucleolus organizer region confident hh_3pki_A_1::87-215,218-256,260-288,292-302,347-392 very confident psy13183 192 Q73KE1::NAD-dependent protein deacetylase ::NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form.::Treponema denticola (strain ATCC 35405 / CIP 103919 / DSM 14222) (taxid: 243275) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::12-192 PF02146::SIR2 100.00::30-192 GO:0005731::nucleolus organizer region confident hh_3pki_A_1::1-192 very confident psy1452 268 Q7VX46::NAD-dependent protein deacetylase ::NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form.::Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) (taxid: 257313) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::39-266 PF02146::SIR2 100.00::57-262 GO:0005759::mitochondrial matrix confident hh_2hjh_A_1::37-73,75-104,108-109,112-205,207-208,210-267 very confident psy16867 275 Q7VX46::NAD-dependent protein deacetylase ::NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form.::Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) (taxid: 257313) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::28-274 PF02146::SIR2 100.00::46-250 GO:0005759::mitochondrial matrix confident hh_2hjh_A_1::26-62,64-91,95-98,101-194,196-196,198-272 very confident psy8974 79 Q9VH08::NAD-dependent protein deacetylase Sirt6 ::NAD-dependent protein deacetylase (By similarity). May be involved in the regulation of life span.::Drosophila melanogaster (taxid: 7227) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 99.54::34-74 PF02146::SIR2 98.89::52-75 GO:0006471::protein ADP-ribosylation confident hh_3pki_A_1::2-77 very confident psy11832 494 Q5RJQ4::NAD-dependent protein deacetylase sirtuin-2 ::NAD-dependent deacetylase, which deacetylates the 'Lys-40' of alpha-tubulin. Involved in the control of mitotic exit in the cell cycle, probably via its role in the regulation of cytoskeleton.::Rattus norvegicus (taxid: 10116) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::1-247 PF02146::SIR2 100.00::1-210 GO:0008270::zinc ion binding confident hh_1j8f_A_1::1-54,85-219,223-235 very confident psy14105 198 O67919::NAD-dependent protein deacylase ::NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form.::Aquifex aeolicus (strain VF5) (taxid: 224324) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::4-197 PF02146::SIR2 100.00::17-197 GO:0016787::hydrolase activity confident hh_1m2k_A_1::5-86,91-136,161-171,174-198 very confident psy6862 315 Q9VK34::NAD-dependent histone deacetylase Sir2 ::NAD-dependent histone deacetylase involved in heterochromatic silencing. Mildly suppresses the heterochromatin-mediated silencing phenomenon known as position-effect variegation (PEV). Required for epigenetic silencing of the polycomb group proteins. Has histone H4 deacetylase activity in vitro. Required maternally for establishing proper segmentation of the embryo. Involved in sex determination. May be involved in the regulation of life span.::Drosophila melanogaster (taxid: 7227) confident COG0846::SIR2 NAD-dependent protein deacetylases, SIR2 family [Transcription] 100.00::182-313 PF02146::SIR2 99.97::200-313 GO:0030512::negative regulation of transforming growth factor beta receptor signaling pathway confident hh_1q1a_A_1::179-224,226-226,228-310,312-313 very confident psy14503 230 Q9ZCJ9::DNA polymerase III subunit epsilon ::DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.::Rickettsia prowazekii (strain Madrid E) (taxid: 272947) confident COG0847::DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] 100.00::2-230 PF00929::RNase_T 99.95::5-166 GO:0009360::DNA polymerase III complex confident hh_2gui_A_1::2-115,117-176 very confident psy8198 230 Q9ZCJ9::DNA polymerase III subunit epsilon ::DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.::Rickettsia prowazekii (strain Madrid E) (taxid: 272947) confident COG0847::DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] 100.00::2-230 PF00929::RNase_T 99.95::5-166 GO:0009360::DNA polymerase III complex confident hh_2gui_A_1::2-115,117-176 very confident psy8196 230 Q9ZCJ9::DNA polymerase III subunit epsilon ::DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.::Rickettsia prowazekii (strain Madrid E) (taxid: 272947) confident COG0847::DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] 100.00::2-230 PF00929::RNase_T 99.95::5-166 GO:0009360::DNA polymerase III complex confident hh_2gui_A_1::2-115,117-176 very confident psy8197 230 Q9ZCJ9::DNA polymerase III subunit epsilon ::DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease.::Rickettsia prowazekii (strain Madrid E) (taxid: 272947) confident COG0847::DnaQ DNA polymerase III, epsilon subunit and related 3'-5' exonucleases [DNA replication, recombination, and repair] 100.00::2-230 PF00929::RNase_T 99.95::5-166 GO:0009360::DNA polymerase III complex confident hh_2gui_A_1::2-115,117-176 very confident psy15771 265 Q0MQG8::NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Pan troglodytes (taxid: 9598) very confident COG0852::NuoC NADH:ubiquinone oxidoreductase 27 kD subunit [Energy production and conversion] 100.00::60-228 PF00329::Complex1_30kDa 100.00::92-197 GO:0044281::small molecule metabolic process confident hh_3mcr_A_1::48-62,64-76,78-183 very confident psy15410 87 Q0MQG8::NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Pan troglodytes (taxid: 9598) confident COG0852::NuoC NADH:ubiquinone oxidoreductase 27 kD subunit [Energy production and conversion] 98.93::16-86 PF00329::Complex1_30kDa 97.36::53-86 GO:0055114::oxidation-reduction process confident hh_3mcr_A_1::14-37,39-86 confident psy15773 73 Q0MQG8::NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Pan troglodytes (taxid: 9598) confident COG0852::NuoC NADH:ubiquinone oxidoreductase 27 kD subunit [Energy production and conversion] 97.47::7-36 no hit no match GO:0055114::oxidation-reduction process confident rp_3i9v_5_1::5-55 portable psy7357 302 A8GIR9::Glycine dehydrogenase [decarboxylating] ::The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.::Serratia proteamaculans (strain 568) (taxid: 399741) confident COG1003::GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism] 100.00::1-302 PF02347::GDC-P 100.00::3-300 GO:0005829::cytosol confident hh_1wyu_B_1::1-14,17-127,131-148,150-269,274-282,288-302 very confident psy11160 598 O60701::UDP-glucose 6-dehydrogenase ::Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate.::Homo sapiens (taxid: 9606) confident COG1004::Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] 100.00::6-511 PF03721::UDPG_MGDP_dh_N 100.00::6-265 GO:0005829::cytosol confident hh_2o3j_A_1::5-26,52-169,225-527 very confident psy15231 101 P18929::NADH-ubiquinone oxidoreductase chain 1 ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Drosophila melanogaster (taxid: 7227) confident COG1005::NuoH NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion] 99.91::12-100 PF00146::NADHdh 99.92::20-100 GO:0044464::cell part confident bp_4he8_H_1::10-23,25-99 portable psy5224 1178 P93313::NADH-ubiquinone oxidoreductase chain 4 ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Arabidopsis thaliana (taxid: 3702) portable COG1008::NuoM NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion] 100.00::192-592 PF00459::Inositol_P 100.00::918-1176 GO:0005887::integral to plasma membrane confident hh_2q74_A_1::916-1150,1152-1175 very confident psy11337 155 Q05201::Developmental protein eyes absent ::Thought to play a role in transcription regulation during organogenesis through its intrinsic protein phosphatase activity. The phosphatase activity was shown in vitro. Appears to function together with So and Dac in eye development. Required for the survival of eye progenitor cells at a critical stage in morphogenesis.::Drosophila melanogaster (taxid: 7227) confident COG1011::Predicted hydrolase (HAD superfamily) [General function prediction only] 97.10::46-137 PF13419::HAD_2 97.87::46-137 GO:0010212::response to ionizing radiation confident rp_3geb_A_1::8-155 very confident psy8471 242 Q05201::Developmental protein eyes absent ::Thought to play a role in transcription regulation during organogenesis through its intrinsic protein phosphatase activity. The phosphatase activity was shown in vitro. Appears to function together with So and Dac in eye development. Required for the survival of eye progenitor cells at a critical stage in morphogenesis.::Drosophila melanogaster (taxid: 7227) confident COG1011::Predicted hydrolase (HAD superfamily) [General function prediction only] 96.58::115-208 PF13419::HAD_2 97.55::115-207 GO:0019204::nucleotide phosphatase activity confident hh_3geb_A_1::1-34,48-225 very confident psy10611 124 Q07536::Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial ::Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.::Bos taurus (taxid: 9913) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.95::1-107 PF00171::Aldedh 99.93::1-102 GO:0000062::fatty-acyl-CoA binding confident hh_4e4g_A_1::1-108 very confident psy13780 100 P47895::Aldehyde dehydrogenase family 1 member A3 ::Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Seems to be the key enzyme in the formation of an RA gradient along the dorso-ventral axis during the early eye development and also in the development of the olfactory system.::Homo sapiens (taxid: 9606) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.66::1-88 PF00171::Aldedh 99.59::1-88 GO:0004029::aldehyde dehydrogenase (NAD) activity confident hh_2o2p_A_1::1-19,21-89 very confident psy1099 605 P20000::Aldehyde dehydrogenase, mitochondrial ::::Bos taurus (taxid: 9913) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::357-601 PF00171::Aldedh 100.00::358-596 GO:0005634::nucleus confident hh_3r31_A_1::358-366,370-381,383-601 very confident psy5845 87 Q8MI17::Retinal dehydrogenase 1 ::Can convert/oxidize retinaldehyde to retinoic acid.::Oryctolagus cuniculus (taxid: 9986) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.74::3-87 PF00171::Aldedh 99.70::3-87 GO:0005634::nucleus confident hh_3r31_A_1::3-87 very confident psy18173 191 B0JWW5::Gamma-glutamyl phosphate reductase ::Catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate.::Microcystis aeruginosa (strain NIES-843) (taxid: 449447) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::11-187 PF00171::Aldedh 100.00::9-188 GO:0005739::mitochondrion confident hh_2h5g_A_1::10-76,78-155,157-190 very confident psy1962 79 Q54RA2::Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial ::Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles.::Dictyostelium discoideum (taxid: 44689) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.52::4-73 PF00171::Aldedh 99.39::2-73 GO:0005739::mitochondrion confident hh_4e3x_A_1::2-39,41-73 very confident psy1960 428 Q9P8I0::Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial ::::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::64-402 PF00171::Aldedh 100.00::90-404 GO:0005739::mitochondrion confident hh_4e3x_A_1::15-79,90-132,140-145,147-149,152-157,159-374 very confident psy3652 394 Q2KJC9::Alpha-aminoadipic semialdehyde dehydrogenase ::Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism.::Bos taurus (taxid: 9913) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::38-382 PF00171::Aldedh 100.00::45-377 GO:0005829::cytosol confident hh_2j6l_A_1::14-32,35-381 very confident psy3661 109 Q2KJC9::Alpha-aminoadipic semialdehyde dehydrogenase ::Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism.::Bos taurus (taxid: 9913) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.94::2-106 PF00171::Aldedh 99.89::2-107 GO:0005829::cytosol confident hh_2j6l_A_1::2-74,78-106 very confident psy3658 74 Q2KJC9::Alpha-aminoadipic semialdehyde dehydrogenase ::Multifunctional enzyme mediating important protective effects. Metabolizes betaine aldehyde to betaine, an important cellular osmolyte and methyl donor. Protects cells from oxidative stress by metabolizing a number of lipid peroxidation-derived aldehydes. Involved in lysine catabolism.::Bos taurus (taxid: 9913) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.74::2-68 PF00171::Aldedh 99.53::3-69 GO:0005829::cytosol confident hh_2j6l_A_1::3-68 very confident psy3132 507 Q8BWF0::Succinate-semialdehyde dehydrogenase, mitochondrial ::Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).::Mus musculus (taxid: 10090) very confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::31-505 PF00171::Aldedh 100.00::38-501 GO:0005829::cytosol very confident hh_2w8n_A_1::29-229,233-346,348-384,387-505 very confident psy5844 442 P11884::Aldehyde dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) very confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::29-403 PF00171::Aldedh 100.00::30-406 GO:0008774::acetaldehyde dehydrogenase (acetylating) activity very confident hh_3r31_A_1::30-64,68-97,99-204,206-317,319-403 very confident psy10614 70 Q9EQ20::Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial ::Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.::Mus musculus (taxid: 10090) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.85::2-68 PF00171::Aldedh 99.72::2-68 GO:0018478::malonate-semialdehyde dehydrogenase (acetylating) activity confident rp_4e4g_A_1::1-45 very confident psy1100 81 P20000::Aldehyde dehydrogenase, mitochondrial ::::Bos taurus (taxid: 9913) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 98.50::23-75 PF00171::Aldedh 98.17::30-76 GO:0042221::response to chemical stimulus confident hh_2ve5_A_1::20-76 very confident psy1961 147 P0C2X9::Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial ::Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.::Rattus norvegicus (taxid: 10116) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.97::2-134 PF00171::Aldedh 99.95::2-131 GO:0055114::oxidation-reduction process confident hh_4e3x_A_1::2-147 very confident psy1843 120 P0C2X9::Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial ::Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.::Rattus norvegicus (taxid: 10116) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.97::1-120 PF00171::Aldedh 99.94::1-119 GO:0055114::oxidation-reduction process confident rp_4e3x_A_1::2-21,24-120 very confident psy1844 120 P0C2X9::Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial ::Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes.::Rattus norvegicus (taxid: 10116) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.97::1-120 PF00171::Aldedh 99.94::1-119 GO:0055114::oxidation-reduction process confident rp_4e3x_A_1::2-21,24-120 very confident psy15673 484 P11883::Aldehyde dehydrogenase, dimeric NADP-preferring ::ALDHs play a major role in the detoxification of alcohol-derived acetaldehyde. They are involved in the metabolism of corticosteroids, biogenic amines, neurotransmitters, and lipid peroxidation. This protein preferentially oxidizes aromatic aldehyde substrates. It may play a role in the oxidation of toxic aldehydes.::Rattus norvegicus (taxid: 10116) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::2-473 PF00171::Aldedh 100.00::2-468 GO:0055114::oxidation-reduction process confident hh_3sza_A_1::1-272,372-397,399-475 very confident psy1588 68 P47740::Fatty aldehyde dehydrogenase ::::Mus musculus (taxid: 10090) confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 99.27::1-54 PF00171::Aldedh 99.11::2-50 GO:0055114::oxidation-reduction process confident hh_3lns_A_1::2-53 very confident psy11681 181 Q54DG1::Aldehyde dehydrogenase family 3 comG ::::Dictyostelium discoideum (taxid: 44689) portable COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::1-178 PF00171::Aldedh 100.00::1-180 GO:0055114::oxidation-reduction process confident hh_3sza_A_1::1-57,59-83,85-179 very confident psy10608 445 Q7QC84::Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial ::Plays a role in valine and pyrimidine metabolism. Binds fatty acyl-CoA.::Anopheles gambiae (taxid: 7165) very confident COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::31-427 PF00171::Aldedh 100.00::38-423 GO:0055114::oxidation-reduction process confident hh_4e4g_A_1::27-313,315-430 very confident psy7043 167 Q8BWF0::Succinate-semialdehyde dehydrogenase, mitochondrial ::Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA).::Mus musculus (taxid: 10090) portable COG1012::PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] 100.00::1-167 PF00171::Aldedh 100.00::1-166 GO:0055114::oxidation-reduction process confident hh_2o2p_A_1::1-131,133-167 very confident psy5567 314 Q0P487::NADH-cytochrome b5 reductase 2 ::NADH-cytochrome b5 reductases are involved in desaturation and elongation of fatty acids, cholesterol biosynthesis and drug metabolism.::Danio rerio (taxid: 7955) confident COG1018::Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] 99.94::91-314 PF00970::FAD_binding_6 99.86::95-253 GO:0055114::oxidation-reduction process confident hh_1umk_A_1::81-122,174-263,265-314 very confident psy581 343 Q3MHW9::NADH-cytochrome b5 reductase 1 ::NADH-cytochrome b5 reductases are involved in desaturation and elongation of fatty acids, cholesterol biosynthesis, drug metabolism, and, in erythrocyte, methemoglobin reduction.::Bos taurus (taxid: 9913) very confident COG1018::Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] 100.00::48-342 PF00970::FAD_binding_6 99.82::52-158 GO:0055114::oxidation-reduction process confident hh_1umk_A_1::38-169,171-285,319-343 very confident psy8246 527 Q7L1T6::Cytochrome b5 reductase 4 ::NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway. Plays a critical role in protecting pancreatic beta-cells against oxidant stress, possibly by protecting the cell from excess buildup of reactive oxygen species (ROS). Reduces a variety of substrates in vitro, such as cytochrome c, feericyanide and methemoglobin.::Homo sapiens (taxid: 9606) confident COG1018::Hmp Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 [Energy production and conversion] 100.00::275-519 PF00970::FAD_binding_6 99.80::278-380 GO:0055114::oxidation-reduction process confident hh_1umk_A_1::272-334,340-459,463-471,476-506 very confident psy8155 617 B5F750::Probable crotonobetaine/carnitine-CoA ligase ::Could catalyze the transfer of CoA to carnitine, generating the initial carnitinyl-CoA needed for the CaiB reaction cycle.::Salmonella agona (strain SL483) (taxid: 454166) portable COG1020::EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::24-617 PF00501::AMP-binding 100.00::214-613 GO:0005789::endoplasmic reticulum membrane confident hh_3r44_A_1::197-337,349-364,367-429,431-509,511-512,514-538,543-561,564-581,584-588,590-596,598-617 very confident psy8218 228 O60488::Long-chain-fatty-acid--CoA ligase 4 ::Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses arachidonate and eicosapentaenoate as substrates.::Homo sapiens (taxid: 9606) confident COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 100.00::1-228 PF00501::AMP-binding 99.76::2-95 GO:0005783::endoplasmic reticulum confident hh_3r44_A_1::2-19,21-27,31-32,34-59,62-64,67-94,96-141,168-176,178-196,203-222 very confident psy6874 504 Q63151::Long-chain-fatty-acid--CoA ligase 3 ::Acyl-CoA synthetases (ACSL) activates long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. ACSL3 is required for the incorporation of fatty acids into phosphatidylcholine, the major phospholipid located on the surface of VLDL (very low density lipoproteins) (By similarity). Has mainly an anabolic role in energy metabolism. Mediates hepatic lipogenesis. Preferentially uses myristate, laurate, arachidonate and eicosapentaenoate as substrates. Both isoforms exhibit the same level of activity.::Rattus norvegicus (taxid: 10116) confident COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 100.00::90-504 PF00501::AMP-binding 100.00::97-503 GO:0005783::endoplasmic reticulum confident hh_3r44_A_1::87-113,135-243,259-271,275-364,373-399,441-470,472-503 very confident psy2847 83 Q5ZKR7::Long-chain-fatty-acid--CoA ligase ACSBG2 ::Mediates activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation.::Gallus gallus (taxid: 9031) portable COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 99.71::1-83 PF00501::AMP-binding 99.62::2-83 GO:0005794::Golgi apparatus confident hh_3r44_A_1::2-83 very confident psy2842 486 Q5ZKR7::Long-chain-fatty-acid--CoA ligase ACSBG2 ::Mediates activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation.::Gallus gallus (taxid: 9031) portable COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 100.00::18-485 PF00501::AMP-binding 99.87::199-464 GO:0005794::Golgi apparatus confident hh_3tsy_A_1::189-196,199-282,284-295,297-298,300-326,330-379,381-464 very confident psy2417 391 Q91WC3::Long-chain-fatty-acid--CoA ligase 6 ::Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Plays an important role in fatty acid metabolism in brain and the acyl-CoAs produced may be utilized exclusively for the synthesis of the brain lipid.::Mus musculus (taxid: 10090) portable COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 100.00::81-387 PF00501::AMP-binding 100.00::89-386 GO:0005794::Golgi apparatus confident hh_3tsy_A_1::77-107,112-196,198-221,228-383 very confident psy8308 311 no hit no match COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 100.00::18-306 PF00501::AMP-binding 99.98::29-305 GO:0044710::single-organism metabolic process confident hh_3r44_A_1::19-48,55-76,85-91,93-177,184-239,243-254,256-271,274-308 very confident psy2420 174 Q91WC3::Long-chain-fatty-acid--CoA ligase 6 ::Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Plays an important role in fatty acid metabolism in brain and the acyl-CoAs produced may be utilized exclusively for the synthesis of the brain lipid.::Mus musculus (taxid: 10090) confident COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 99.97::2-166 PF13193::AMP-binding_C 98.97::42-145 GO:0031090::organelle membrane confident hh_3g7s_A_1::4-10,12-32,34-79,98-101,106-112,114-133,140-157 confident psy2837 107 Q5ZKR7::Long-chain-fatty-acid--CoA ligase ACSBG2 ::Mediates activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation.::Gallus gallus (taxid: 9031) portable COG1022::FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] 99.68::1-107 no hit no match GO:0001676::long-chain fatty acid metabolic process confident hh_1pg4_A_1::59-73,75-75,81-103 portable psy7339 223 B1KPS7::DNA mismatch repair protein MutS ::This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.::Shewanella woodyi (strain ATCC 51908 / MS32) (taxid: 392500) portable COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::29-214 PF00378::ECH 100.00::31-215 GO:0003677::DNA binding confident hh_2fbm_A_1::28-70,72-212 very confident psy9494 314 A4YI89::3-hydroxypropionyl-coenzyme A dehydratase ::Plays a role in autotrophic carbon fixation via the 3-hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl-CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crotonyl-CoA. Inactive towards (R)-3-hydroxybutyryl-CoA.::Metallosphaera sedula (strain ATCC 51363 / DSM 5348) (taxid: 399549) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::13-289 PF00378::ECH 100.00::18-267 GO:0003824::catalytic activity confident hh_3qxi_A_1::13-93,95-95,97-143,180-292 very confident psy504 358 Q86YB7::Enoyl-CoA hydratase domain-containing protein 2, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::44-228 PF00378::ECH 100.00::42-258 GO:0005618::cell wall confident hh_1hzd_A_1::35-196,199-206,214-230 very confident psy14406 275 Q62651::Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial ::Isomerization of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA.::Rattus norvegicus (taxid: 10116) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::1-230 PF00378::ECH 100.00::1-230 GO:0005777::peroxisome confident hh_1dci_A_1::1-43,45-231 very confident psy9280 143 Q5R646::Enoyl-CoA hydratase, mitochondrial ::Straight-chain enoyl-CoA thioesters from C4 up to at least C16 are processed, although with decreasing catalytic rate.::Pongo abelii (taxid: 9601) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 99.91::37-143 PF00378::ECH 99.88::43-143 GO:0005829::cytosol confident hh_3h81_A_1::36-47,51-143 very confident psy9281 152 P34559::Probable enoyl-CoA hydratase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 99.97::6-147 PF00378::ECH 99.97::5-147 GO:0005875::microtubule associated complex confident hh_3h81_A_1::5-9,14-150 very confident psy503 333 Q2TBT3::Enoyl-CoA hydratase domain-containing protein 2, mitochondrial ::::Bos taurus (taxid: 9913) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::45-330 PF00378::ECH 100.00::44-325 GO:0005875::microtubule associated complex confident hh_3kqf_A_1::35-40,43-219,224-253,257-261,294-333 very confident psy12573 315 Q9D7J9::Enoyl-CoA hydratase domain-containing protein 3, mitochondrial ::::Mus musculus (taxid: 10090) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::38-313 PF00378::ECH 100.00::38-313 GO:0043956::3-hydroxypropionyl-CoA dehydratase activity confident hh_2vx2_A_1::23-33,38-57,66-106,153-156,168-273,275-314 very confident psy8151 220 A4WFX4::Fatty acid oxidation complex subunit alpha ::Catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities.::Enterobacter sp. (strain 638) (taxid: 399742) portable COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::8-219 PF00378::ECH 99.96::14-219 GO:0044281::small molecule metabolic process confident hh_1dci_A_1::9-36,50-95,115-115,125-125,130-134,151-219 very confident psy5402 198 O34893::Putative enoyl-CoA hydratase/isomerase YngF ::::Bacillus subtilis (strain 168) (taxid: 224308) portable COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::1-196 PF00378::ECH 100.00::1-197 GO:0044281::small molecule metabolic process confident hh_2f6q_A_1::1-60,73-198 very confident psy15240 155 A4WFX4::Fatty acid oxidation complex subunit alpha ::Catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities.::Enterobacter sp. (strain 638) (taxid: 399742) portable COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::1-154 PF00378::ECH 100.00::1-151 GO:0044446::intracellular organelle part confident hh_1sg4_A_1::1-82,84-155 very confident psy9060 366 P40939::Trifunctional enzyme subunit alpha, mitochondrial ::Bifunctional subunit.::Homo sapiens (taxid: 9606) confident COG1024::CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism] 100.00::62-308 PF00378::ECH 100.00::66-308 GO:0055114::oxidation-reduction process confident hh_1wdk_A_1::63-114,116-117,119-189,214-270,284-309,311-311,313-314,316-317,319-359 very confident psy12151 528 P47245::Nardilysin ::Cleaves peptide substrates on the N-terminus of arginine residues in dibasic pairs.::Rattus norvegicus (taxid: 10116) portable COG1025::Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] 100.00::64-527 PF00675::Peptidase_M16 99.91::158-294 GO:0031323::regulation of cellular metabolic process confident hh_1q2l_A_1::64-98,158-302,308-360,362-438,442-526 very confident psy8002 469 Q9JHR7::Insulin-degrading enzyme ::Plays a role in the cellular breakdown of insulin, IAPP, glucagon, bradykinin, kallidin and other peptides, and thereby plays a role in intercellular peptide signaling. Degrades amyloid formed by APP and IAPP.::Mus musculus (taxid: 10090) portable COG1025::Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] 100.00::6-465 PF05193::Peptidase_M16_C 99.65::228-407 GO:0005829::cytosol confident hh_3cww_A_1::18-172,175-465 very confident psy5653 740 Q9CXT8::Mitochondrial-processing peptidase subunit beta ::Cleaves presequences (transit peptides) from mitochondrial protein precursors.::Mus musculus (taxid: 10090) confident COG1025::Ptr Secreted/periplasmic Zn-dependent peptidases, insulinase-like [Posttranslational modification, protein turnover, chaperones] 100.00::14-722 PF05193::Peptidase_M16_C 99.85::469-655 GO:0005875::microtubule associated complex confident hh_3eoq_A_1::322-410,412-520,523-525,528-572,580-582,585-714,716-723 very confident psy10742 207 Q14B62::Patched domain-containing protein 1 ::::Mus musculus (taxid: 10090) portable COG1033::Predicted exporters of the RND superfamily [General function prediction only] 95.87::117-188 PF02460::Patched 98.76::1-83 GO:0016328::lateral plasma membrane confident rp_1vt4_I_1::2-9,11-21,26-95,97-101,103-113,115-126,128-132,135-149,155-171 portable psy8507 197 P18502::Protein patched ::Segmentation polarity protein. Acts as a receptor for the hedgehog protein (HH). Associates with the smoothened protein (SMO) to transduce the hedgehog signal leading to the activation of wingless, decapentaplegic and patched itself. Participates in cell interactions that establish pattern within the segment and the imaginal disks during development. In the absence of HH, represses the constitutive signaling activity of smo through fused (FU).::Drosophila melanogaster (taxid: 7227) confident COG1033::Predicted exporters of the RND superfamily [General function prediction only] 99.01::96-195 PF02460::Patched 100.00::15-197 GO:0042221::response to chemical stimulus confident hh_4dx5_A_1::97-171 portable psy16375 89 A6QM06::Sterol regulatory element-binding protein cleavage-activating protein ::Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.::Bos taurus (taxid: 9913) confident COG1033::Predicted exporters of the RND superfamily [General function prediction only] 96.83::6-88 PF12349::Sterol-sensing 99.88::5-88 GO:0005789::endoplasmic reticulum membrane confident hh_2v50_A_1::6-82 portable psy8504 150 Q13635::Protein patched homolog 1 ::Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal. Seems to have a tumor suppressor function, as inactivation of this protein is probably a necessary, if not sufficient step for tumorigenesis.::Homo sapiens (taxid: 9606) confident COG1033::Predicted exporters of the RND superfamily [General function prediction only] 99.90::13-148 PF12349::Sterol-sensing 100.00::9-150 GO:0097108::hedgehog family protein binding confident hh_4dx5_A_1::14-46,48-148 confident psy674 70 P18502::Protein patched ::Segmentation polarity protein. Acts as a receptor for the hedgehog protein (HH). Associates with the smoothened protein (SMO) to transduce the hedgehog signal leading to the activation of wingless, decapentaplegic and patched itself. Participates in cell interactions that establish pattern within the segment and the imaginal disks during development. In the absence of HH, represses the constitutive signaling activity of smo through fused (FU).::Drosophila melanogaster (taxid: 7227) confident COG1033::Predicted exporters of the RND superfamily [General function prediction only] 93.67::16-68 no hit no match GO:0048471::perinuclear region of cytoplasm confident hh_3ne5_A_1::15-59 portable psy3842 139 Q91VD9::NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). This is the largest subunit of complex I and it is a component of the iron-sulfur (IP) fragment of the enzyme. It may form part of the active site crevice where NADH is oxidized.::Mus musculus (taxid: 10090) confident COG1034::NuoG NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) [Energy production and conversion] 99.97::1-134 PF10588::NADH-G_4Fe-4S_3 99.72::17-57 GO:0005758::mitochondrial intermembrane space confident hh_3i9v_3_1::1-119 very confident psy15244 1427 Q05920::Pyruvate carboxylase, mitochondrial ::Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. Catalyzes in a tissue specific manner, the initial reactions of glucose (liver, kidney) and lipid (adipose tissue, liver, brain) synthesis from pyruvate.::Mus musculus (taxid: 10090) confident COG1038::PycA Pyruvate carboxylase [Energy production and conversion] 100.00::55-1426 PF02436::PYC_OADA 100.00::990-1234 GO:0005829::cytosol confident hh_2qf7_A_1::55-494,496-515,517-540,542-556,587-602,647-794,798-862,864-931,963-979,981-1108,1120-1128,1134-1135,1139-1145,1166-1172,1180-1234,1312-1320,1322-1426 very confident psy2807 288 Q05920::Pyruvate carboxylase, mitochondrial ::Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. Catalyzes in a tissue specific manner, the initial reactions of glucose (liver, kidney) and lipid (adipose tissue, liver, brain) synthesis from pyruvate.::Mus musculus (taxid: 10090) portable COG1038::PycA Pyruvate carboxylase [Energy production and conversion] 100.00::22-263 PF02436::PYC_OADA 99.97::21-147 GO:0005829::cytosol confident hh_3hbl_A_1::21-151,153-264 very confident psy3968 1080 Q05920::Pyruvate carboxylase, mitochondrial ::Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. Catalyzes in a tissue specific manner, the initial reactions of glucose (liver, kidney) and lipid (adipose tissue, liver, brain) synthesis from pyruvate.::Mus musculus (taxid: 10090) confident COG1038::PycA Pyruvate carboxylase [Energy production and conversion] 100.00::1-981 PF02436::PYC_OADA 100.00::589-800 GO:0005829::cytosol confident hh_2vpq_A_1::2-17,19-286,290-338,340-412 very confident psy3972 77 Q05920::Pyruvate carboxylase, mitochondrial ::Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. Catalyzes in a tissue specific manner, the initial reactions of glucose (liver, kidney) and lipid (adipose tissue, liver, brain) synthesis from pyruvate.::Mus musculus (taxid: 10090) confident COG1038::PycA Pyruvate carboxylase [Energy production and conversion] 99.65::6-61 no hit no match GO:0005829::cytosol confident hh_3hbl_A_1::6-28,30-60 very confident psy14198 149 O13966::Aconitate hydratase, mitochondrial ::Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1048::AcnA Aconitase A [Energy production and conversion] 98.42::60-134 PF00330::Aconitase 98.41::65-132 GO:0005506::iron ion binding confident hh_1c96_A_1::32-135 very confident psy9581 903 Q4UK20::Aconitate hydratase ::Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.::Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456) very confident COG1048::AcnA Aconitase A [Energy production and conversion] 100.00::4-902 PF00330::Aconitase 100.00::44-562 GO:0005507::copper ion binding very confident hh_2b3y_A_1::4-13,15-30,34-354,356-620,622-627,629-658,660-734,742-845,847-861,864-867,871-902 very confident psy3833 1087 O13966::Aconitate hydratase, mitochondrial ::Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1048::AcnA Aconitase A [Energy production and conversion] 100.00::126-889 PF00330::Aconitase 100.00::116-617 GO:0005615::extracellular space confident hh_1c96_A_1::112-328,401-890 very confident psy16645 94 Q90875::Cytoplasmic aconitate hydratase ::Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.::Gallus gallus (taxid: 9031) confident COG1048::AcnA Aconitase A [Energy production and conversion] 99.87::5-94 PF00330::Aconitase 95.41::57-94 GO:0005829::cytosol confident hh_2b3y_A_1::2-71,74-94 very confident psy5344 566 Q90875::Cytoplasmic aconitate hydratase ::Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.::Gallus gallus (taxid: 9031) confident COG1048::AcnA Aconitase A [Energy production and conversion] 100.00::1-561 PF00330::Aconitase 100.00::4-376 GO:0005829::cytosol confident hh_2b3y_A_1::1-167,170-174,176-191,194-197,202-202,209-470,472-564 very confident psy7216 102 Q90875::Cytoplasmic aconitate hydratase ::Catalyzes the isomerization of citrate to isocitrate via cis-aconitate.::Gallus gallus (taxid: 9031) confident COG1048::AcnA Aconitase A [Energy production and conversion] 99.92::2-102 PF00694::Aconitase_C 99.52::1-34 GO:0005829::cytosol confident hh_2b3y_A_1::2-102 very confident psy13065 114 Q8GW31::mRNA-decapping enzyme subunit 2 ::Catalytic component of the decapping complex necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Essential for postembryonic development, especially during the formation of the shoot apical meristem (SAM).::Arabidopsis thaliana (taxid: 3702) portable COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.06::2-81 PF00293::NUDIX 99.00::2-82 GO:0006402::mRNA catabolic process confident hh_2jvb_A_1::2-81,93-111 very confident psy11365 95 Q9NZJ9::Diphosphoinositol polyphosphate phosphohydrolase 2 ::Cleaves a beta-phosphate from the diphosphate groups in PP-InsP5 (diphosphoinositol pentakisphosphate), PP-InsP4 and [PP]2-InsP4 (bisdiphosphoinositol tetrakisphosphate), suggesting that it may play a role in signal transduction. Also able to catalyze the hydrolysis of dinucleoside oligophosphate Ap6A, but not Ap5A. The major reaction products are ADP and p4a from Ap6A. Also able to hydrolyze 5-phosphoribose 1-diphosphate.::Homo sapiens (taxid: 9606) confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.86::22-95 PF00293::NUDIX 99.71::26-91 GO:0009117::nucleotide metabolic process confident hh_2fvv_A_1::35-92 very confident psy9980 124 Q4FP40::RNA pyrophosphohydrolase ::Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage.::Pelagibacter ubique (strain HTCC1062) (taxid: 335992) confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.90::16-124 PF00293::NUDIX 99.86::19-124 GO:0016462::pyrophosphatase activity confident hh_3h95_A_1::15-124 very confident psy11834 230 O95848::Uridine diphosphate glucose pyrophosphatase ::Hydrolyzes UDP-glucose to glucose 1-phosphate and UMP and ADP-ribose to ribose 5-phosphate and AMP. The physiological substrate is probably UDP-glucose. Poor activity on other substrates such as ADP-glucose, CDP-glucose, GDP-glucose and GDP-mannose.::Homo sapiens (taxid: 9606) confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.48::108-201 PF00293::NUDIX 99.76::45-206 GO:0016818::hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides confident hh_3o6z_A_1::4-11,13-34,39-65,79-90,107-119,121-140,143-207,209-222 very confident psy7748 232 Q96DE0::U8 snoRNA-decapping enzyme ::RNA-decapping enzyme that binds specifically to U8 snoRNA. Part of the U8 snoRNP complex that is required for the accumulation of mature 5.8S and 28S rRNA. Has diphosphatase activity and removes m7G and m227G caps from U8 snoRNA. Has broad substrate specificity with manganese or cobalt as cofactor and can act on various RNA species (in vitro).::Homo sapiens (taxid: 9606) confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.72::50-180 PF00293::NUDIX 99.71::51-181 GO:0042803::protein homodimerization activity confident rp_1u20_A_1::36-221 very confident psy13138 362 Q09297::Putative nudix hydrolase 6 ::Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.::Caenorhabditis elegans (taxid: 6239) confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.62::174-309 PF00293::NUDIX 99.25::174-214 GO:0043262::adenosine-diphosphatase activity confident hh_1q33_A_1::34-59,61-109,111-116,119-317 very confident psy10892 135 Q6ZVK8::8-oxo-dGDP phosphatase NUDT18 ::Probably mediates the hydrolysis of some nucleoside diphosphate derivatives.::Homo sapiens (taxid: 9606) confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.74::65-134 PF00293::NUDIX 99.65::66-132 GO:0046712::GDP catabolic process confident hh_3gg6_A_1::63-133 very confident psy13064 192 Q8GW31::mRNA-decapping enzyme subunit 2 ::Catalytic component of the decapping complex necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Essential for postembryonic development, especially during the formation of the shoot apical meristem (SAM).::Arabidopsis thaliana (taxid: 3702) portable COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.42::131-191 PF05026::DCP2 100.00::13-97 GO:0006402::mRNA catabolic process confident hh_2a6t_A_1::7-102,139-190 very confident psy169 280 Q3SZ22::39S ribosomal protein L46, mitochondrial ::::Bos taurus (taxid: 9913) confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 99.24::159-265 PF11788::MRP-L46 99.82::45-143 GO:0005739::mitochondrion confident hh_1ktg_A_1::157-168,170-208,210-221,230-267 very confident psy16776 214 Q3ZCA2::Cleavage and polyadenylation specificity factor subunit 5 ::Component of the cleavage factor Im (CFIm) complex that plays a key role in pre-mRNA 3'-processing. Involved in association with CPSF6 or CPSF7 in pre-MRNA 3'-end poly(A) site cleavage and poly(A) addition. NUDT21/CPSF5 binds to cleavage and polyadenylation RNA substrates. The homodimer mediates simultaneous sequence-specific recognition of two 5'-UGUA-3' elements within the pre-mRNA. Binds to, but does not hydrolyze mono- and di-adenosine nucleotides. May have a role in mRNA export.::Bos taurus (taxid: 9913) very confident COG1051::ADP-ribose pyrophosphatase [Nucleotide transport and metabolism] 98.87::76-151 PF13869::NUDIX_2 100.00::32-214 GO:0003729::mRNA binding very confident hh_3bho_A_1::24-214 very confident psy15800 109 Q9UBQ7::Glyoxylate reductase/hydroxypyruvate reductase ::Enzyme with hydroxy-pyruvate reductase, glyoxylate reductase and D-glycerate dehydrogenase enzymatic activities. Reduces hydroxypyruvate to D-glycerate, glyoxylate to glycolate oxidizes D-glycerate to hydroxypyruvate.::Homo sapiens (taxid: 9606) portable COG1052::LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] 100.00::2-108 PF00389::2-Hacid_dh 99.56::5-49 GO:0055114::oxidation-reduction process confident hh_4g2n_A_1::6-108 very confident psy16115 258 O43865::Putative adenosylhomocysteinase 2 ::::Homo sapiens (taxid: 9606) confident COG1052::LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] 99.95::44-250 PF02826::2-Hacid_dh_C 99.90::104-221 GO:0006611::protein export from nucleus confident bp_3gvp_A_1::98-228 very confident psy18199 70 P46838::46 kDa membrane protein ::::Mycobacterium leprae (taxid: 1769) confident COG1055::ArsB Na+/H+ antiporter NhaD and related arsenite permeases [Inorganic ion transport and metabolism] 99.33::5-65 PF03600::CitMHS 99.41::5-66 GO:0005789::endoplasmic reticulum membrane confident hh_4f35_D_2::5-65 confident psy9416 344 Q0VD50::Nicotinamide mononucleotide adenylyltransferase 1 ::Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate with the same efficiency. Can use triazofurin monophosphate (TrMP) as substrate. Also catalyzes the reverse reaction, i.e. the pyrophosphorolytic cleavage of NAD(+). For the pyrophosphorolytic activity, prefers NAD(+) and NAAD as substrates and degrades NADH, nicotinic acid adenine dinucleotide phosphate (NHD) and nicotinamide guanine dinucleotide (NGD) less effectively. Fails to cleave phosphorylated dinucleotides NADP(+), NADPH and NAADP(+). Protects against axonal degeneration following mechanical or toxic insults.::Bos taurus (taxid: 9913) confident COG1057::NadD Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism] 100.00::6-240 PF01467::CTP_transf_2 99.95::11-214 GO:0009435::NAD biosynthetic process confident hh_1kqn_A_1::5-245 very confident psy11640 552 Q5RA62::TFIIH basal transcription factor complex helicase XPB subunit ::ATP-dependent 3'-5' DNA helicase, component of the core-TFIIH basal transcription factor, involved in nucleotide excision repair (NER) of DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. Acts by opening DNA either around the RNA transcription start site or the DNA damage.::Pongo abelii (taxid: 9601) confident COG1061::SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] 100.00::6-466 PF00176::SNF2_N 99.63::25-140 GO:0008353::RNA polymerase II carboxy-terminal domain kinase activity confident hh_2fwr_A_1::28-75,77-77,81-92,96-110,121-124,126-139,221-271,273-326,329-373,375-402,404-426,431-453 very confident psy11637 67 Q02870::DNA excision repair protein haywire ::Probably an ATP-dependent DNA helicase involved in excision repair of DNA. May have a DNA unwinding function.::Drosophila melanogaster (taxid: 7227) very confident COG1061::SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] 99.55::6-65 PF04851::ResIII 99.50::8-64 GO:0008344::adult locomotory behavior confident hh_3b6e_A_1::7-25,29-65 very confident psy16285 97 Q9P2E3::NFX1-type zinc finger-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG1061::SSL2 DNA or RNA helicases of superfamily II [Transcription / DNA replication, recombination, and repair] 99.34::14-94 PF13086::AAA_11 99.72::19-91 GO:0043234::protein complex confident hh_2xzl_A_1::17-61,68-93 very confident psy16556 100 Q58D31::Sorbitol dehydrogenase ::Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.::Bos taurus (taxid: 9913) confident COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 99.92::3-100 PF01488::Shikimate_DH 98.19::55-98 GO:0051160::L-xylitol catabolic process confident hh_1e3j_A_1::9-82,84-100 very confident psy2960 405 Q9V6U9::Probable trans-2-enoyl-CoA reductase, mitochondrial ::Catalyzes the reduction of trans-2-enoyl-CoA to acyl-CoA. May have a role in the mitochondrial synthesis of fatty acids.::Drosophila melanogaster (taxid: 7227) very confident COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 100.00::70-404 PF08240::ADH_N 99.78::100-182 GO:0005507::copper ion binding confident hh_1gu7_A_1::70-346,349-389,392-403 very confident psy9949 383 Q8WWV3::Reticulon-4-interacting protein 1, mitochondrial ::Appears to be a potent inhibitor of regeneration following spinal cord injury.::Homo sapiens (taxid: 9606) confident COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 100.00::24-383 PF08240::ADH_N 99.74::54-153 GO:0005739::mitochondrion confident hh_2eih_A_1::27-44,46-79,95-182,187-269,272-276,279-293,297-301,308-312,317-322,329-383 very confident psy7798 261 P19854::Alcohol dehydrogenase class-3 ::Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione.::Equus caballus (taxid: 9796) confident COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 100.00::101-260 PF08240::ADH_N 99.85::127-210 GO:0005829::cytosol confident rp_2fzw_A_1::99-213 very confident psy3510 64 P40783::Quinone oxidoreductase ::::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) confident COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 99.73::1-62 PF08240::ADH_N 99.72::1-56 GO:0005829::cytosol confident hh_1rjw_A_1::1-54 very confident psy1413 408 Q64442::Sorbitol dehydrogenase ::Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.::Mus musculus (taxid: 10090) confident COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 100.00::1-227 PF08240::ADH_N 99.36::1-71 GO:0006062::sorbitol catabolic process confident rp_1e3j_A_1::234-342,344-407 very confident psy1959 296 O42909::Zinc-type alcohol dehydrogenase-like protein C16A3.02c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 100.00::11-277 PF08240::ADH_N 99.72::38-130 GO:0044464::cell part confident hh_1qor_A_1::13-33,39-63,65-82,93-105,107-182,184-216,218-252,254-260 very confident psy3511 91 P40783::Quinone oxidoreductase ::::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) portable COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 99.92::1-88 PF08240::ADH_N 99.82::28-90 GO:0055114::oxidation-reduction process confident hh_1rjw_A_1::1-12,15-24,26-88 very confident psy12355 112 A4YGN0::Succinate-semialdehyde dehydrogenase (acetylating) ::Catalyzes the reduction of succinate semialdehyde to succinyl-CoA. The enzyme is specific for succinate semialdehyde and succinyl-CoA, and only shows low activity with palmitoyl-CoA. There is no activity with NAD(+) as cosubstrate. Participates in the 3-hydroxypropanoate/4-hydroxybutyrate cycle, an autotrophic CO(2) fixation pathway found in some thermoacidophilic archaea.::Metallosphaera sedula (strain ATCC 51363 / DSM 5348) (taxid: 399549) portable COG1064::AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] 99.81::1-110 PF13602::ADH_zinc_N_2 99.61::1-107 GO:0050019::L-arabinitol 4-dehydrogenase activity confident hh_1e3j_A_1::1-112 very confident psy10531 564 Q6NUW9::FGGY carbohydrate kinase domain-containing protein ::::Danio rerio (taxid: 7955) confident COG1070::XylB Sugar (pentulose and hexulose) kinases [Carbohydrate transport and metabolism] 100.00::1-562 PF00370::FGGY_N 100.00::3-260 GO:0070050::neuron homeostasis confident hh_3h3n_X_1::1-91,101-149,151-208,215-216,218-228,230-235,238-240,243-265,267-269,277-302,304-335,349-363,462-500,504-528,531-562 very confident psy4881 423 O13366::Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial ::The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) confident COG1071::AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] 100.00::131-407 PF00676::E1_dh 100.00::190-388 GO:0006086::acetyl-CoA biosynthetic process from pyruvate confident hh_2ozl_A_1::190-409 very confident psy14560 355 O13366::Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial ::The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) confident COG1071::AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] 100.00::11-192 PF00676::E1_dh 100.00::12-194 GO:0006086::acetyl-CoA biosynthetic process from pyruvate confident hh_2ozl_A_1::13-191 very confident psy11439 91 P52899::Probable pyruvate dehydrogenase E1 component subunit alpha, mitochondrial ::The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).::Caenorhabditis elegans (taxid: 6239) confident COG1071::AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] 100.00::1-90 PF00676::E1_dh 99.98::1-90 GO:0006086::acetyl-CoA biosynthetic process from pyruvate confident hh_2ozl_A_1::1-90 very confident psy16520 353 Q54M22::2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial ::The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).::Dictyostelium discoideum (taxid: 44689) confident COG1071::AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion] 100.00::31-353 PF00676::E1_dh 100.00::41-338 GO:0044281::small molecule metabolic process confident rp_2bfd_A_1::31-176 very confident psy15218 5957 A6SV83::30S ribosomal protein S21 ::::Janthinobacterium sp. (strain Marseille) (taxid: 375286) portable COG1074::RecB ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) [DNA replication, recombination, and repair] 100.00::2791-3889 PF04257::Exonuc_V_gamma 100.00::1890-2481 GO:0022627::cytosolic small ribosomal subunit confident hh_3lfu_A_2::2783-2793,2795-2854,2894-2933,2936-2948,2969-2969,2984-2987,3024-3038,3053-3058,3070-3070,3087-3088,3093-3093,3095-3095,3102-3102,3133-3171,3175-3208,3215-3248,3251-3297,3328-3348,3364-3512,3514-3554,3557-3557,3564-3595,3604-3612,3622-3622,3627-3627,3639-3686 very confident psy7351 253 Q20390::Palmitoyl-protein thioesterase 1 ::Removes thioester-linked fatty acyl groups such as palmitate from modified cysteine residues in proteins or peptides.::Caenorhabditis elegans (taxid: 6239) very confident COG1075::LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only] 99.12::1-116 PF02089::Palm_thioest 100.00::1-252 GO:0051181::cofactor transport confident hh_1ei9_A_1::1-251 very confident psy8325 237 no hit no match COG1076::DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] 99.87::67-232 PF07743::HSCB_C 99.76::152-225 GO:0005737::cytoplasm confident hh_3uo3_A_1::62-104,113-229 very confident psy17172 80 Q9QXQ1::cAMP-specific 3',5'-cyclic phosphodiesterase 7B ::Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May be involved in the control of cAMP-mediated neural activity and cAMP metabolism in the brain.::Mus musculus (taxid: 10090) confident COG1078::HD superfamily phosphohydrolases [General function prediction only] 93.93::42-69 PF00233::PDEase_I 99.90::28-80 GO:0040020::regulation of meiosis confident hh_1f0j_A_1::2-80 very confident psy13612 294 Q5ZJL9::SAM domain and HD domain-containing protein 1 ::Putative nuclease involved in innate immune response by acting as a negative regulator of the cell-intrinsic antiviral response.::Gallus gallus (taxid: 9031) confident COG1078::HD superfamily phosphohydrolases [General function prediction only] 100.00::4-291 PF01966::HD 99.19::54-187 GO:0003723::RNA binding confident hh_3u1n_A_1::4-215,218-271 very confident psy15712 358 O44411::Probable nucleolar GTP-binding protein 1 ::Involved in the biogenesis of the 60S ribosomal subunit.::Caenorhabditis elegans (taxid: 6239) confident COG1084::Predicted GTPase [General function prediction only] 100.00::73-358 PF08155::NOGCT 99.96::17-68 GO:0005794::Golgi apparatus very confident rp_2qu8_A_1::223-352 very confident psy10444 341 P43424::Galactose-1-phosphate uridylyltransferase ::::Rattus norvegicus (taxid: 10116) confident COG1085::GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] 100.00::50-341 PF01087::GalP_UDP_transf 100.00::49-217 GO:0005794::Golgi apparatus confident hh_1gup_A_1::47-247,264-340 very confident psy8179 84 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) confident COG1086::Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] 98.75::28-83 PF01370::Epimerase 98.18::55-82 GO:0055114::oxidation-reduction process confident rp_4dqv_A_1::27-48,52-77 confident psy11859 851 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1086::Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] 100.00::80-515 PF02719::Polysacc_synt_2 100.00::221-512 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_2rpc_A_1::683-722,725-753,756-791,822-841 very confident psy3445 121 Q7TNT2::Fatty acyl-CoA reductase 2 ::Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.::Mus musculus (taxid: 10090) confident COG1086::Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] 99.53::12-104 PF07993::NAD_binding_4 98.71::70-115 GO:0055114::oxidation-reduction process confident hh_4dqv_A_1::32-43,49-51,55-90,94-113 confident psy4233 303 Q16795::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Homo sapiens (taxid: 9606) confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::19-293 PF01073::3Beta_HSD 100.00::22-263 GO:0005759::mitochondrial matrix confident hh_2a35_A_1::17-54,57-57,65-85,88-139,147-185,187-192,196-202,204-206,209-209,211-231,234-248 very confident psy14682 322 Q5R8D0::UDP-glucose 4-epimerase ::Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine.::Pongo abelii (taxid: 9601) confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::1-241 PF01073::3Beta_HSD 99.86::1-200 GO:0005829::cytosol confident hh_3enk_A_1::2-32,35-57,79-161,165-244 very confident psy18114 359 Q29RI9::Methionine adenosyltransferase 2 subunit beta ::Non-catalytic regulatory subunit of S-adenosylmethionine synthetase 2 (MAT2A), an enzyme that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Regulates the activity of S-adenosylmethionine synthetase 2 by changing its kinetic properties, rendering the enzyme more susceptible to S-adenosylmethionine inhibition.::Bos taurus (taxid: 9913) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::6-347 PF01073::3Beta_HSD 100.00::9-274 GO:0045335::phagocytic vesicle confident hh_2p5y_A_1::6-42,50-52,54-77,84-200,204-236,240-240,244-280,318-318,325-347,350-357 very confident psy14739 360 Q8NBZ7::UDP-glucuronic acid decarboxylase 1 ::Catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid to UDP-xylose. Necessary for the biosynthesis of the core tetrasaccharide in glycosaminoglycan biosynthesis.::Homo sapiens (taxid: 9606) confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::83-357 PF01073::3Beta_HSD 100.00::86-356 GO:0048040::UDP-glucuronate decarboxylase activity confident hh_2b69_A_1::80-282,305-357 very confident psy897 125 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.67::14-124 PF01073::3Beta_HSD 99.69::17-125 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::11-94,96-120,122-125 very confident psy16545 600 Q8R059::UDP-glucose 4-epimerase ::Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine.::Mus musculus (taxid: 10090) confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::254-593 PF01370::Epimerase 99.90::9-235 GO:0005829::cytosol confident rp_1z45_A_2::202-204,207-216,224-233,239-345 very confident psy15786 306 Q8K3X3::GDP-mannose 4,6 dehydratase ::Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.::Cricetulus griseus (taxid: 10029) very confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::41-305 PF01370::Epimerase 100.00::43-290 GO:0070401::NADP+ binding very confident hh_1t2a_A_1::41-281,284-294,296-305 very confident psy16526 422 A1ZAI5::Putative fatty acyl-CoA reductase CG5065 ::Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.::Drosophila melanogaster (taxid: 7227) confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.68::289-421 PF03015::Sterile 99.97::147-240 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_4dqv_A_1::304-345,347-371,373-420 very confident psy16546 111 Q5R8D0::UDP-glucose 4-epimerase ::Catalyzes two distinct but analogous reactions: the epimerization of UDP-glucose to UDP-galactose and the epimerization of UDP-N-acetylglucosamine to UDP-N-acetylgalactosamine.::Pongo abelii (taxid: 9601) confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.94::2-111 PF04321::RmlD_sub_bind 99.29::15-110 GO:0005829::cytosol confident rp_3enk_A_1::3-41,43-111 very confident psy7590 358 Q5RBE5::GDP-L-fucose synthase ::Two step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.::Pongo abelii (taxid: 9601) very confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::5-351 PF04321::RmlD_sub_bind 100.00::5-349 GO:0050577::GDP-L-fucose synthase activity confident hh_4b8w_A_1::2-198,238-329,332-357 very confident psy13944 1217 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.90::9-325 PF07993::NAD_binding_4 99.95::13-254 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_4dqv_A_1::8-86,88-110,112-137,158-209,211-214,216-261 very confident psy16243 782 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.97::176-623 PF07993::NAD_binding_4 99.97::218-485 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_2x4g_A_1::258-269,276-322,324-349,373-376,379-419,442-442,450-465,469-492,518-528,531-531,533-549 confident psy3446 166 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.67::1-152 PF07993::NAD_binding_4 99.66::13-135 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident rp_4dqv_A_1::69-143,145-163 confident psy17528 366 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.97::49-363 PF07993::NAD_binding_4 99.97::53-354 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::44-72,74-109,141-186,188-211,213-240,261-308,311-360 very confident psy7539 318 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 100.00::1-313 PF07993::NAD_binding_4 100.00::1-264 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident rp_4dqv_A_1::1-52,55-103,105-120,122-135,148-174,179-211,214-299 very confident psy705 232 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.97::1-228 PF07993::NAD_binding_4 99.97::13-222 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::14-54,56-80,82-106,127-176,179-228 very confident psy3626 189 Q923D2::Flavin reductase (NADPH) ::Broad specificity oxidoreductase that catalyzes the NADPH-dependent reduction of a variety of flavins, such as riboflavin, FAD or FMN, biliverdins, methemoglobin and PQQ (pyrroloquinoline quinone). Contributes to heme catabolism and metabolizes linear tetrapyrroles. Can also reduce the complexed Fe(3+) iron to Fe(2+) in the presence of FMN and NADPH. In the liver, converts biliverdin to bilirubin.::Mus musculus (taxid: 10090) confident COG1087::GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] 99.86::2-183 PF13460::NAD_binding_10 99.84::4-189 GO:0042602::riboflavin reductase (NADPH) activity confident hh_1hdo_A_1::2-58,102-189 very confident psy7542 762 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1088::RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] 100.00::62-431 PF07993::NAD_binding_4 100.00::66-338 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_4dqv_A_1::59-122,125-169,171-194,196-226,245-292,294-296,299-378,380-383 very confident psy17679 303 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG1088::RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] 99.97::45-296 PF07993::NAD_binding_4 99.96::49-280 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::42-70,74-151,153-176,178-297 very confident psy7538 543 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) confident COG1088::RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] 100.00::31-427 PF07993::NAD_binding_4 100.00::35-307 GO:0055114::oxidation-reduction process confident hh_4dqv_A_1::27-55,57-92,94-138,140-163,165-194,213-261,264-265,267-316,318-348,350-352 very confident psy15783 86 Q9VMW9::GDP-mannose 4,6 dehydratase ::Conversion of GDP-D-mannose to GDP-4-keto-6-D-deoxymannose.::Drosophila melanogaster (taxid: 7227) confident COG1089::Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] 99.96::2-84 PF04321::RmlD_sub_bind 93.28::5-50 GO:0005829::cytosol confident rp_1t2a_A_1::12-83 very confident psy18081 82 P68102::Eukaryotic translation initiation factor 2 subunit 1 ::Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.::Bos taurus (taxid: 9913) confident COG1093::SUI2 Translation initiation factor 2, alpha subunit (eIF-2alpha) [Translation, ribosomal structure and biogenesis] 99.31::2-64 no hit no match GO:0005829::cytosol confident hh_1q8k_A_1::1-75 very confident psy7546 150 O74919::RNA-binding protein rnc1 ::Binds and stabilizes pmp1 mRNA and hence acts as a negative regulator of pmk1 signaling. Overexpression suppresses the Cl(-) sensitivity of calcineurin deletion.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1094::Predicted RNA-binding protein (contains KH domains) [General function prediction only] 97.88::19-150 PF00013::KH_1 99.53::22-82 GO:0000790::nuclear chromatin confident hh_2jzx_A_1::18-97,112-150 very confident psy15011 334 O74777::KRR1 small subunit processome component homolog ::Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1094::Predicted RNA-binding protein (contains KH domains) [General function prediction only] 100.00::71-273 PF00013::KH_1 97.62::175-260 GO:0005654::nucleoplasm confident hh_2e3u_A_1::74-199,239-277,279-282 very confident psy13906 914 P57721::Poly(rC)-binding protein 3 ::Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.::Homo sapiens (taxid: 9606) portable COG1094::Predicted RNA-binding protein (contains KH domains) [General function prediction only] 98.55::79-333 PF00013::KH_1 99.08::708-773 GO:0005829::cytosol confident hh_2jzx_A_1::438-515,517-595 very confident psy11929 433 P57721::Poly(rC)-binding protein 3 ::Single-stranded nucleic acid binding protein that binds preferentially to oligo dC.::Homo sapiens (taxid: 9606) confident COG1094::Predicted RNA-binding protein (contains KH domains) [General function prediction only] 98.81::13-194 PF00013::KH_1 99.31::289-350 GO:0005829::cytosol confident hh_2jzx_A_1::12-23,28-71,94-194 very confident psy4141 353 Q05A36::RNA-binding E3 ubiquitin-protein ligase MEX3C ::RNA-binding protein. May be involved in post-transcriptional regulatory mechanisms.::Mus musculus (taxid: 10090) portable COG1094::Predicted RNA-binding protein (contains KH domains) [General function prediction only] 98.63::3-147 PF00013::KH_1 99.36::82-141 GO:0008270::zinc ion binding confident hh_1j4w_A_1::2-59,64-145 very confident psy11278 238 Q99MQ1::Protein bicaudal C homolog 1 ::Putative RNA-binding protein. May be involved in regulating gene expression during embryonic development.::Mus musculus (taxid: 10090) confident COG1094::Predicted RNA-binding protein (contains KH domains) [General function prediction only] 98.99::2-224 PF00013::KH_1 99.42::149-215 GO:0090090::negative regulation of canonical Wnt receptor signaling pathway confident hh_3n89_A_1::1-93,95-219,224-236 very confident psy8224 766 Q6VEU3::RNA-binding protein PNO1 ::::Danio rerio (taxid: 7955) confident COG1094::Predicted RNA-binding protein (contains KH domains) [General function prediction only] 100.00::30-200 PF00856::SET 99.05::615-665 GO:0005829::cytosol confident hh_1tua_A_1::32-110,112-200 very confident psy11392 169 Q9Y535::DNA-directed RNA polymerase III subunit RPC8 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. Plays a key role in sensing and limiting infection by intracellular bacteria and DNA viruses. Acts as nuclear and cytosolic DNA sensor involved in innate immune response. Can sense non-self dsDNA that serves as template for transcription into dsRNA. The non-self RNA polymerase III transcripts, such as Epstein-Barr virus-encoded RNAs (EBERs) induce type I interferon and NF- Kappa-B through the RIG-I pathway.::Homo sapiens (taxid: 9606) confident COG1095::RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] 99.97::5-107 PF03876::SHS2_Rpb7-N 99.47::6-63 GO:0006139::nucleobase-containing compound metabolic process confident hh_2b8k_G_1::5-100 very confident psy13107 170 P62487::DNA-directed RNA polymerase II subunit RPB7 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB7 is part of a subcomplex with RPB4 that binds to a pocket formed by RPB1, RPB2 and RPB6 at the base of the clamp element. The RBP4-RPB7 subcomplex seems to lock the clamp via RPB7 in the closed conformation thus preventing double stranded DNA to enter the active site cleft. The RPB4-RPB7 subcomplex binds single-stranded DNA and RNA (By similarity). Binds RNA.::Homo sapiens (taxid: 9606) very confident COG1095::RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] 100.00::1-170 PF08292::RNA_pol_Rbc25 99.91::79-170 GO:0005665::DNA-directed RNA polymerase II, core complex very confident hh_2c35_B_1::1-170 very confident psy11391 112 Q9D2C6::DNA-directed RNA polymerase III subunit RPC8 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNA. Plays a key role in sensing and limiting infection by intracellular bacteria and DNA viruses. Acts as nuclear and cytosolic DNA sensor involved in innate immune response. Can sense non-self dsDNA that serves as template for transcription into dsRNA. The non-self RNA polymerase III transcripts induce type I interferon and NF- Kappa-B through the RIG-I pathway.::Mus musculus (taxid: 10090) confident COG1095::RPB7 DNA-directed RNA polymerase, subunit E' [Transcription] 99.14::2-108 PF08292::RNA_pol_Rbc25 100.00::2-107 GO:0006139::nucleobase-containing compound metabolic process confident hh_2ckz_B_1::2-36,40-90,95-107 very confident psy6276 271 no hit no match COG1096::Predicted RNA-binding protein (consists of S1 domain and a Zn-ribbon domain) [Translation, ribosomal structure and biogenesis] 100.00::3-192 PF10447::EXOSC1 99.87::67-137 GO:0005634::nucleus confident hh_2nn6_I_1::4-18,20-45,49-189 very confident psy230 222 Q08285::Exosome complex component RRP40 ::Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and cryptic unstable transcripts (CUTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and in RNA surveillance pathways, preventing translation of aberrant mRNAs. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. RRP40 as peripheral part of the Exo-9 complex is thought to stabilize the hexameric ring of RNase PH-domain subunits.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1097::RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] 100.00::1-221 PF10447::EXOSC1 99.30::53-113 GO:0000176::nuclear exosome (RNase complex) confident hh_2nn6_G_1::1-165,168-218 very confident psy10116 298 Q8VBV3::Exosome complex component RRP4 ::Non-catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. EXOSC2 as peripheral part of the Exo-9 complex stabilizes the hexameric ring of RNase PH-domain subunits through contacts with EXOSC4 and EXOSC7.::Mus musculus (taxid: 10090) very confident COG1097::RRP4 RNA-binding protein Rrp4 and related proteins (contain S1 domain and KH domain) [Translation, ribosomal structure and biogenesis] 100.00::28-250 PF10447::EXOSC1 99.41::83-154 GO:0005652::nuclear lamina very confident hh_2nn6_H_1::8-24,26-295 very confident psy9521 125 Q8BXL7::ADP-ribosylation factor-related protein 1 ::Possibly involved in plasma membrane-related signaling events.::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.63::16-123 PF00025::Arf 99.88::5-125 GO:0005794::Golgi apparatus confident hh_1m2o_B_1::1-41,43-46,55-106,108-122 very confident psy2159 194 P0C951::Small COPII coat GTPase SAR1 ::Small GTPase component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. Sar1 controls the coat assembly in a stepwise manner. Activated Sar1-GTP binds to membranes first and recruits the sec23/24 complex. These sec23/24-sar1 prebudding intermediates are then collected by the Sec13/31 complex as subunits polymerize to form coated transport vesicles. Conversion to sar1-GDP triggers coat release and recycles COPII subunits.::Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.89::21-193 PF00025::Arf 100.00::8-193 GO:0005829::cytosol very confident hh_1m2o_B_1::4-151,153-158,163-193 very confident psy1315 202 P61214::ADP-ribosylation factor-like protein 4A ::Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase-activating proteins (GAP). GTP-binding protein that does not act as an allosteric activator of the cholera toxin catalytic subunit. Recruits CYTH1, CYTH2, CYTH3 and CYTH4 to the plasma membrane in GDP-bound form.::Rattus norvegicus (taxid: 10116) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.92::19-189 PF00025::Arf 100.00::7-185 GO:0005829::cytosol very confident hh_2h57_A_1::15-60,66-155,157-187 very confident psy689 162 Q52NJ4::ADP-ribosylation factor-like protein 3 ::Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase-activating proteins (GAP). Required for normal cytokinesis and cilia signaling. Requires assistance from GTPase-activating proteins (GAPs) like RP2 and PDE6D, in order to cycle between inactive GDP-bound and active GTP-bound forms. Required for targeting proteins such as NPHP3 to the ciliary membrane by releasing myristoylated NPHP3 from UNC119B cargo adapter into the cilium.::Sus scrofa (taxid: 9823) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.84::38-156 PF00025::Arf 99.94::35-159 GO:0005829::cytosol very confident rp_1fzq_A_1::23-157 very confident psy12173 224 Q9ZPX1::Probable ADP-ribosylation factor At2g18390 ::GTP-binding protein that functions as an allosteric activator of the cholera toxin catalytic subunit, an ADP-ribosyltransferase. Involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus.::Arabidopsis thaliana (taxid: 3702) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.87::52-219 PF00025::Arf 99.95::50-210 GO:0005829::cytosol confident bp_1ksh_A_1::54-78,82-194 very confident psy11510 171 Q9ZPX1::Probable ADP-ribosylation factor At2g18390 ::GTP-binding protein that functions as an allosteric activator of the cholera toxin catalytic subunit, an ADP-ribosyltransferase. Involved in protein trafficking; may modulate vesicle budding and uncoating within the Golgi apparatus.::Arabidopsis thaliana (taxid: 3702) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.86::37-170 PF00025::Arf 99.97::29-169 GO:0009790::embryo development confident rp_1ksh_A_1::48-146 very confident psy1914 211 O13950::Signal recognition particle receptor subunit beta ::Component of the SRP (signal recognition particle) receptor. Ensures, in conjunction with the signal recognition particle, the correct targeting of the nascent secretory proteins to the endoplasmic reticulum membrane system. Has GTPase activity. May mediate the membrane association of SRPR.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.87::11-134 PF00025::Arf 100.00::8-210 GO:0044425::membrane part confident hh_2fh5_B_1::7-197,201-210 very confident psy4433 211 O13950::Signal recognition particle receptor subunit beta ::Component of the SRP (signal recognition particle) receptor. Ensures, in conjunction with the signal recognition particle, the correct targeting of the nascent secretory proteins to the endoplasmic reticulum membrane system. Has GTPase activity. May mediate the membrane association of SRPR.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.87::11-134 PF00025::Arf 100.00::8-210 GO:0044425::membrane part confident hh_2fh5_B_1::7-197,201-210 very confident psy9524 81 Q99K70::Ras-related GTP-binding protein C ::Has guanine nucleotide-binding activity but weak intrinsic GTPase activity. Probably required for the amino acid-induced relocalization of mTORC1 to the lysosomes and its subsequent activation by the GTPase RHEB. This is a crucial step in the activation of the TOR signaling cascade by amino acids.::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.76::1-80 PF00025::Arf 99.82::1-81 GO:0046982::protein heterodimerization activity confident hh_3llu_A_1::1-81 very confident psy9621 253 P35281::Ras-related protein Rab-10 ::May be involved in vesicular trafficking and neurotransmitter release.::Rattus norvegicus (taxid: 10116) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.91::9-225 PF00071::Ras 100.00::11-222 GO:0000145::exocyst very confident rp_2fu5_C_1::1-3,5-121 very confident psy11289 159 P04388::Ras-like protein 2 ::May be involved in endocytic processes and/or other transport pathways mediated by vesicle trafficking. May interact functionally with ROP protein. Ras proteins bind GDP/GTP and possess intrinsic GTPase activity.::Drosophila melanogaster (taxid: 7227) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.80::3-147 PF00071::Ras 99.97::2-144 GO:0000910::cytokinesis very confident hh_2fn4_A_1::3-150 very confident psy9997 330 P40793::Cdc42 homolog ::Regulates mbt kinase activity and is also required to recruit mbt to adheren junctions. Together with mbt, regulates photoreceptor cell morphogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.89::61-319 PF00071::Ras 99.97::65-316 GO:0003924::GTPase activity very confident hh_1mh1_A_1::60-121,201-322 very confident psy2646 168 Q92928::Putative Ras-related protein Rab-1C ::Protein transport. Probably involved in vesicular traffic.::Homo sapiens (taxid: 9606) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.64::4-136 PF00071::Ras 99.93::4-133 GO:0005525::GTP binding very confident rp_3tkl_A_1::17-148 very confident psy10735 147 Q3T0F5::Ras-related protein Rab-7a ::Key regulator in endo-lysosomal trafficking. Governs early-to-late endosomal maturation, microtubule minus-end as well as plus-end directed endosomal migration and positioning, and endosome-lysosome transport through different protein-protein interaction cascades. Plays a central role, not only in endosomal traffic, but also in many other cellular and physiological events, such as growth-factor-mediated cell signaling, nutrient-transportor mediated nutrient uptake, neurotrophin transport in the axons of neurons and lipid metabolism. Also involved in regulation of some specialized endosomal membrane trafficking, such as maturation of melanosomes, pathogen-induced phagosomes (or vacuoles) and autophagosomes. Plays important roles in microbial pathogen infection and survival, as well as in participating in the life cycle of viruses. Microbial pathogens possess survival strategies governed by RAB7A, sometimes by employing RAB7A function (e.g. Salmonella) and sometimes by excluding RAB7A function (e.g. Mycobacterium). In concert with RAC1, plays a role in regulating the formation of RBs (ruffled borders) in osteoclasts. Controls the endosomal trafficking and neurite outgrowth signaling of NTRK1/TRKA. Regulates the endocytic trafficking of the EGF-EGFR complex by regulating its lysosomal degradation.::Bos taurus (taxid: 9913) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.22::22-67 PF00071::Ras 99.78::23-114 GO:0005770::late endosome very confident hh_1wms_A_1::18-116 very confident psy549 253 O94363::GTP-binding protein rhb1 ::Regulates entry into stationary phase when extracellular nitrogen levels are adequate for growth.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.90::49-215 PF00071::Ras 99.97::51-211 GO:0005829::cytosol confident hh_2bcg_Y_1::46-92,94-181,183-217 very confident psy2518 208 P17609::GTP-binding protein ypt2 ::Protein transport. Probably involved in vesicular traffic.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.90::26-190 PF00071::Ras 100.00::29-186 GO:0005829::cytosol confident hh_2hup_A_1::21-190 very confident psy4710 192 P48148::Ras-like GTP-binding protein Rho1 ::Has a role in regulating actin cytoskeletal organization: required during early development for proper execution of morphogenetic movements of individual cells and groups of cells important for the formation of the embryonic body plan. Plays a role in regulating dorsal closure during embryogenesis. May have a role in eye development.::Drosophila melanogaster (taxid: 7227) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.93::4-182 PF00071::Ras 100.00::7-179 GO:0005829::cytosol very confident hh_2gco_A_1::1-180 very confident psy14754 192 P48148::Ras-like GTP-binding protein Rho1 ::Has a role in regulating actin cytoskeletal organization: required during early development for proper execution of morphogenetic movements of individual cells and groups of cells important for the formation of the embryonic body plan. Plays a role in regulating dorsal closure during embryogenesis. May have a role in eye development.::Drosophila melanogaster (taxid: 7227) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.93::4-182 PF00071::Ras 100.00::7-179 GO:0005829::cytosol very confident hh_2gco_A_1::1-180 very confident psy2599 78 P51153::Ras-related protein Rab-13 ::Could participate in polarized transport, in the assembly and/or the activity of tight junctions.::Homo sapiens (taxid: 9606) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.84::1-78 PF00071::Ras 99.87::2-77 GO:0005829::cytosol confident hh_2hup_A_1::2-64,67-78 very confident psy15625 223 Q15907::Ras-related protein Rab-11B ::GTPase that modulates endosomal trafficking. Acts as a major regulator of membrane delivery during cytokinesis.::Homo sapiens (taxid: 9606) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.90::11-222 PF00071::Ras 100.00::13-222 GO:0005829::cytosol very confident hh_2f9l_A_1::8-109,161-222 very confident psy43 64 Q38922::Ras-related protein RABB1b ::Intracellular vesicle trafficking and protein transport.::Arabidopsis thaliana (taxid: 3702) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.36::10-63 PF00071::Ras 99.56::12-64 GO:0005829::cytosol confident hh_2bcg_Y_1::6-54,56-63 very confident psy38 193 Q38922::Ras-related protein RABB1b ::Intracellular vesicle trafficking and protein transport.::Arabidopsis thaliana (taxid: 3702) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.77::2-155 PF00071::Ras 99.96::3-150 GO:0005829::cytosol very confident hh_2hup_A_1::3-27,29-86,88-104,108-153 very confident psy2600 158 Q3SWY9::Ras-related protein Rab-28 ::::Bos taurus (taxid: 9913) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.28::32-122 PF00071::Ras 99.84::32-120 GO:0005829::cytosol confident hh_2bcg_Y_1::32-61,64-123 very confident psy17235 170 Q3ZBM5::Sorting nexin-5 ::May be involved in several stages of intracellular trafficking. Plays a role in macropinocytosis. Plays a role in the internalization of EGFR after EGF stimulation.::Bos taurus (taxid: 9913) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.64::1-104 PF00071::Ras 99.91::1-104 GO:0005829::cytosol confident hh_2hup_A_1::1-68,70-104 very confident psy13826 173 Q52NJ6::Ras-related protein Rab-14 ::Involved in membrane trafficking between the Golgi complex and endosomes during early embryonic development. Regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development. May act by modulating the kinesin KIF16B-cargo association to endosomes.::Sus scrofa (taxid: 9823) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.78::86-172 PF00071::Ras 99.86::88-173 GO:0005829::cytosol very confident hh_1z0f_A_1::81-172 very confident psy1169 218 Q52NJ6::Ras-related protein Rab-14 ::Involved in membrane trafficking between the Golgi complex and endosomes during early embryonic development. Regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development. May act by modulating the kinesin KIF16B-cargo association to endosomes.::Sus scrofa (taxid: 9823) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.93::15-183 PF00071::Ras 100.00::17-177 GO:0005829::cytosol very confident hh_1z0f_A_1::9-178 very confident psy5781 231 Q53B90::Ras-related protein Rab-43 ::::Rattus norvegicus (taxid: 10116) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.85::21-140 PF00071::Ras 99.94::23-173 GO:0005829::cytosol confident hh_2hup_A_1::15-173 very confident psy5771 108 Q53B90::Ras-related protein Rab-43 ::::Rattus norvegicus (taxid: 10116) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.87::22-106 PF00071::Ras 99.92::23-108 GO:0005829::cytosol confident hh_2hup_A_1::14-107 very confident psy10117 135 Q567Y6::Rab-like protein 5 ::::Danio rerio (taxid: 7955) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.93::3-122 PF00071::Ras 99.97::4-122 GO:0005829::cytosol confident hh_3q3j_B_1::2-40,44-106,109-122 very confident psy8700 200 Q5PR73::GTP-binding protein Di-Ras2 ::Displays low GTPase activity and exist predominantly in the GTP-bound form.::Mus musculus (taxid: 10090) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.92::7-180 PF00071::Ras 100.00::9-173 GO:0005829::cytosol very confident hh_2erx_A_1::6-109,113-176 very confident psy1416 177 Q6PHN9::Ras-related protein Rab-35 ::In the process of endocytosis, essential rate-limiting regulator of a fast recycling pathway back to the plasma membrane. During cytokinesis, required for the postfurrowing terminal steps, Endosome (By similarity). Melanosome (By similarity). namely for intercellular bridge stability and abscission, possibly by controlling phosphatidylinositol 4,5-bis phosphate (PIP2) and SEPT2 localization at the intercellular bridge.::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 98.56::60-148 PF00071::Ras 99.70::60-144 GO:0005829::cytosol confident hh_2bcg_Y_1::60-82,85-151 very confident psy1417 188 Q6PHN9::Ras-related protein Rab-35 ::In the process of endocytosis, essential rate-limiting regulator of a fast recycling pathway back to the plasma membrane. During cytokinesis, required for the postfurrowing terminal steps, Endosome (By similarity). Melanosome (By similarity). namely for intercellular bridge stability and abscission, possibly by controlling phosphatidylinositol 4,5-bis phosphate (PIP2) and SEPT2 localization at the intercellular bridge.::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.87::42-157 PF00071::Ras 99.96::43-182 GO:0005829::cytosol confident rp_3tw8_B_1::51-150 very confident psy12927 75 Q92928::Putative Ras-related protein Rab-1C ::Protein transport. Probably involved in vesicular traffic.::Homo sapiens (taxid: 9606) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.75::7-73 PF00071::Ras 99.82::9-73 GO:0005829::cytosol confident hh_2bcg_Y_1::1-73 very confident psy2300 221 Q96E17::Ras-related protein Rab-3C ::Protein transport. Probably involved in vesicular traffic.::Homo sapiens (taxid: 9606) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.91::21-186 PF00071::Ras 100.00::23-183 GO:0005829::cytosol very confident hh_1zbd_A_1::17-191 very confident psy2967 101 Q9CQW2::ADP-ribosylation factor-like protein 8B ::May play a role in lysosomes motility. Alternatively, may play a role in chromosome segregation.::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.61::19-99 PF00071::Ras 99.81::19-100 GO:0005829::cytosol confident hh_1zd9_A_1::20-99 very confident psy2970 329 Q9CQW2::ADP-ribosylation factor-like protein 8B ::May play a role in lysosomes motility. Alternatively, may play a role in chromosome segregation.::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.80::19-178 PF00071::Ras 99.94::22-209 GO:0005829::cytosol confident rp_1zd9_A_1::6-94,136-187 very confident psy17231 189 Q9FPJ4::Ras-related protein RABD2b ::Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER).::Arabidopsis thaliana (taxid: 3702) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.92::6-161 PF00071::Ras 100.00::10-156 GO:0005829::cytosol confident hh_2hup_A_1::6-37,40-160 very confident psy15714 205 Q9HF56::Cell division control protein 42 ::Involved in development of cell polarity during the cell division cycle. Required for the establishment of actin polarization in germ cells.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.94::23-199 PF00071::Ras 100.00::25-197 GO:0005829::cytosol very confident hh_1mh1_A_1::21-201 very confident psy12922 184 P17609::GTP-binding protein ypt2 ::Protein transport. Probably involved in vesicular traffic.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.92::7-178 PF00071::Ras 100.00::9-176 GO:0005923::tight junction very confident hh_2hup_A_1::4-108,116-181 very confident psy16649 83 P55258::Ras-related protein Rab-8A ::May be involved in vesicular trafficking and neurotransmitter release. Together with RAB11A, RAB3IP, the exocyst complex, PARD3, PRKCI, ANXA2, CDC42 and DNMBP promotes transcytosis of PODXL to the apical membrane initiation sites (AMIS), apical surface formation and lumenogenesis. Together with MYO5B and RAB11A participates in epithelial cell polarization.::Mus musculus (taxid: 10090) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.85::1-83 PF00071::Ras 99.92::1-83 GO:0005932::microtubule basal body very confident rp_2fu5_C_1::25-83 very confident psy13093 111 P34145::Rho-related protein rac1B ::Overexpression promotes the formation of filopodia and membrane ruffles.::Dictyostelium discoideum (taxid: 44689) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.81::1-88 PF00071::Ras 99.92::1-110 GO:0006184::GTP catabolic process very confident bp_1mh1_A_1::1-71 very confident psy8274 228 P40792::Ras-related protein Rac1 ::Involved in axon outgrowth and myoblast fusion. Plays a role in regulating dorsal closure during embryogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.86::1-217 PF00071::Ras 99.97::1-213 GO:0006184::GTP catabolic process very confident hh_1mh1_A_1::1-63,112-217 very confident psy8722 223 Q9UL25::Ras-related protein Rab-21 ::Regulates integrin internalization and recycling, but does not influence the traffic of endosomally translocated receptors in general. As a result, may regulate cell adhesion and migration (By similarity). During the mitosis of adherent cells, controls the endosomal trafficking of integrins which is required for the successful completion of cytokinesis.::Homo sapiens (taxid: 9606) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.92::14-185 PF00071::Ras 100.00::17-177 GO:0006184::GTP catabolic process very confident hh_1z08_A_1::12-178 very confident psy9154 115 O08989::Ras-related protein M-Ras ::May serve as an important signal transducer for a novel upstream stimuli in controlling cell proliferation. Weakly activates the MAP kinase pathway.::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.88::11-113 PF00071::Ras 99.95::14-114 GO:0008283::cell proliferation confident hh_2fn4_A_1::8-112 very confident psy10443 195 P62998::Ras-related C3 botulinum toxin substrate 1 ::Plasma membrane-associated small GTPase which cycles between active GTP-bound and inactive GDP-bound states. In its active state, binds to a variety of effector proteins to regulate cellular responses such as secretory processes, phagocytosis of apoptotic cells, epithelial cell polarization and growth-factor induced formation of membrane ruffles. Stimulates PKN2 kinase activity. In concert with RAB7A, plays a role in regulating the formation of RBs (ruffled borders) in osteoclasts.::Bos taurus (taxid: 9913) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.94::4-183 PF00071::Ras 100.00::8-180 GO:0016601::Rac protein signal transduction very confident hh_1mh1_A_1::3-186 very confident psy5805 75 O88667::GTP-binding protein RAD ::May play an important role in cardiac antiarrhythmia via the strong suppression of voltage-gated L-type Ca(2+) currents. Regulates voltage-dependent L-type calcium channel subunit alpha-1C trafficking to the cell membrane. Inhibits cardiac hypertrophy through the calmodulin-dependent kinase II (CaMKII) pathway. Inhibits phosphorylation and activation of CAMK2D.::Mus musculus (taxid: 10090) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.32::3-70 PF00071::Ras 99.71::3-73 GO:0019003::GDP binding confident hh_3cbq_A_1::3-17,20-73 very confident psy15004 167 P55040::GTP-binding protein GEM ::Could be a regulatory protein, possibly participating in receptor-mediated signal transduction at the plasma membrane. Has guanine nucleotide-binding activity but undetectable intrinsic GTPase activity.::Homo sapiens (taxid: 9606) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.26::2-104 PF00071::Ras 99.84::3-101 GO:0030336::negative regulation of cell migration confident hh_2g3y_A_1::3-104 very confident psy5810 250 Q5R541::GTP-binding protein GEM ::Could be a regulatory protein, possibly participating in receptor-mediated signal transduction at the plasma membrane. Has guanine nucleotide-binding activity but undetectable intrinsic GTPase activity.::Pongo abelii (taxid: 9601) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.87::52-217 PF00071::Ras 99.97::53-210 GO:0030336::negative regulation of cell migration confident hh_3cbq_A_1::48-69,71-108,119-213 very confident psy784 128 Q5ZHX1::Ras-related protein Rap-1b ::::Gallus gallus (taxid: 9031) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.92::1-124 PF00071::Ras 99.97::5-127 GO:0030336::negative regulation of cell migration very confident bp_1c1y_A_1::1-126 very confident psy2792 173 Q922H7::Ras-like protein family member 11B ::::Mus musculus (taxid: 10090) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.45::2-111 PF00071::Ras 99.87::2-108 GO:0030336::negative regulation of cell migration confident hh_3cbq_A_1::2-93,95-109 very confident psy1873 157 Q9VND8::GTP-binding protein Rheb homolog ::Not known; binds GTP and exhibits intrinsic GTPase activity.::Drosophila melanogaster (taxid: 7227) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.92::1-157 PF00071::Ras 100.00::1-157 GO:0030336::negative regulation of cell migration confident hh_3t5g_A_1::1-100,114-157 very confident psy14042 238 P28185::Ras-related protein RABA1a ::Involved in auxin-mediated response. May be involved in vesicle trafficking of components involved in polar auxin transport. Binds GTP and GDP and possesses intrinsic GTPase activity.::Arabidopsis thaliana (taxid: 3702) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.19::4-121 PF00071::Ras 99.83::2-118 GO:0031090::organelle membrane confident hh_2f7s_A_1::11-122 very confident psy785 112 P08645::Ras-like protein 3 ::Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. Plays a role in photoreceptor cell determination.::Drosophila melanogaster (taxid: 7227) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.74::2-110 PF00071::Ras 99.95::2-111 GO:0032486::Rap protein signal transduction very confident rp_1c1y_A_1::1-101 very confident psy11135 191 Q295X7::Ras-like protein 1 ::May mediate a signal that determines the fate of photoreceptor cells in the developing compound eye. Ras proteins bind GDP/GTP and possess intrinsic GTPase activity.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.94::1-169 PF00071::Ras 100.00::5-164 GO:0034259::negative regulation of Rho GTPase activity very confident hh_3con_A_1::1-168 very confident psy15257 65 Q91V93::Rho-related BTB domain-containing protein 2 ::::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 98.89::13-52 PF00071::Ras 99.05::14-62 GO:0035011::melanotic encapsulation of foreign target confident hh_1mh1_A_1::11-31,38-52,55-58 very confident psy15036 179 E2RQ15::Ras-related protein Rab-25 ::Involved in the regulation of cell survival. Promotes invasive migration of cells in which it functions to localize and maintain integrin alpha-V/beta-1 at the tips of extending pseudopodia. May selectively regulate the apical recycling pathway (By similarity). Together with MYO5B regulates transcytosis.::Canis familiaris (taxid: 9615) portable COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.77::43-162 PF00071::Ras 99.94::45-177 GO:0043229::intracellular organelle confident hh_2bcg_Y_1::39-83,85-140,147-177 very confident psy4094 663 Q06AU5::Ras-related protein Rab-32 ::Acts as an A-kinase anchoring protein by binding to the type II regulatory subunit of protein kinase A and anchoring it to the mitochondrion. Also involved in synchronization of mitochondrial fission.::Sus scrofa (taxid: 9823) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.88::459-631 PF00071::Ras 99.97::460-627 GO:0043234::protein complex confident hh_2bcg_Y_1::455-505,507-561,566-584,586-601,603-633 very confident psy18160 373 Q98932::Ras-related protein Rab-5C ::Protein transport. Probably involved in vesicular traffic.::Gallus gallus (taxid: 9031) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.83::48-228 PF00071::Ras 99.96::49-225 GO:0043234::protein complex confident hh_1ek0_A_1::47-141,163-225 very confident psy6968 93 Q96P47::Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 ::GTPase-activating protein for the ADP ribosylation factor family (Potential). GTPase which may be involved in the degradation of expanded polyglutamine proteins through the ubiquitin-proteasome pathway.::Homo sapiens (taxid: 9606) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.58::25-91 PF00071::Ras 99.61::26-87 GO:0071944::cell periphery confident hh_3ihw_A_1::21-85 very confident psy2514 71 P35288::Ras-related protein Rab-23 ::::Mus musculus (taxid: 10090) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.62::12-70 PF00071::Ras 99.73::14-70 GO:0097094::craniofacial suture morphogenesis confident hh_1z2a_A_1::10-70 very confident psy6623 262 P16378::Guanine nucleotide-binding protein G(o) subunit alpha 47A ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. Plays a role in glial cell differentiation during embryogenesis; loco, G-ialpha65A and the G-protein coupled receptor, moody, are required in the surface glia to achieve effective insulation of the nerve cord.::Drosophila melanogaster (taxid: 7227) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.37::101-238 PF00503::G-alpha 100.00::4-237 GO:0005525::GTP binding very confident hh_1zcb_A_1::3-27,29-237 very confident psy12099 174 Q292P9::Guanine nucleotide-binding protein G(s) subunit alpha ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.51::1-166 PF00503::G-alpha 100.00::1-163 GO:0005829::cytosol confident hh_1azs_C_1::1-174 very confident psy14891 359 Q9BIG5::Guanine nucleotide-binding protein alpha-4 subunit ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems.::Caenorhabditis elegans (taxid: 6239) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.68::196-351 PF00503::G-alpha 100.00::10-348 GO:0005829::cytosol very confident hh_3ohm_A_1::31-117,120-281,284-359 very confident psy3651 334 Q03113::Guanine nucleotide-binding protein subunit alpha-12 ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems.::Homo sapiens (taxid: 9606) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.32::171-326 PF00503::G-alpha 100.00::14-323 GO:0030168::platelet activation confident hh_1zcb_A_1::14-33,36-55,62-90,92-135,143-256,259-330,332-334 very confident psy16468 463 Q2PKF4::Guanine nucleotide-binding protein G(q) subunit alpha ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems.::Sus scrofa (taxid: 9823) confident COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 98.53::198-297 PF00503::G-alpha 100.00::11-350 GO:0030168::platelet activation confident hh_3ohm_A_1::9-175,198-266,285-300,304-350 very confident psy8318 313 no hit no match COG1100::GTPase SAR1 and related small G proteins [General function prediction only] 99.77::170-300 PF00503::G-alpha 100.00::5-297 GO:0030496::midbody very confident hh_1cip_A_1::5-308 very confident psy4713 103 Q2KIU2::Phosphomevalonate kinase ::::Bos taurus (taxid: 9913) confident COG1102::Cmk Cytidylate kinase [Nucleotide transport and metabolism] 96.75::6-60 PF04275::P-mevalo_kinase 100.00::10-95 GO:0005777::peroxisome confident hh_3ch4_B_1::1-94 very confident psy17798 110 O74351::Probable cysteine desulfurase, mitochondrial ::Catalyzes the removal of elemental sulfur from cysteine to produce alanine. It supplies the inorganic sulfur for iron-sulfur (Fe-S) clusters.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1104::NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] 99.93::1-109 PF00266::Aminotran_5 99.71::2-109 GO:0042803::protein homodimerization activity confident rp_1eg5_A_1::1-14,16-97 very confident psy8850 397 Q1H361::Cysteine desulfurase ::Catalyzes the removal of elemental sulfur from cysteine to produce alanine.::Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) (taxid: 265072) very confident COG1104::NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism] 100.00::1-380 PF00266::Aminotran_5 100.00::1-362 GO:0042803::protein homodimerization activity very confident hh_4eb5_A_1::1-30,32-168,170-214,217-275,277-382 very confident psy5981 131 P39671::Phosphoglucomutase ::This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide.::Rhizobium radiobacter (taxid: 358) confident COG1109::{ManB} Phosphomannomutase [Carbohydrate transport and metabolism] 100.00::14-124 PF02878::PGM_PMM_I 100.00::16-123 GO:0005634::nucleus confident hh_1kfi_A_1::6-123 very confident psy5979 499 P38652::Phosphoglucomutase-1 ::This enzyme participates in both the breakdown and synthesis of glucose.::Rattus norvegicus (taxid: 10116) confident COG1109::{ManB} Phosphomannomutase [Carbohydrate transport and metabolism] 100.00::17-496 PF02878::PGM_PMM_I 99.94::29-147 GO:0005829::cytosol confident hh_1kfi_A_1::35-205,210-232,234-241,243-293,295-315,318-319,321-445,448-448,450-490 very confident psy1654 459 Q2YW66::Phosphoglucomutase ::Catalyzes the interconversion between glucose-6-phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in the S.aureus membrane, which is also used as a membrane anchor for lipoteichoic acid (LTA).::Staphylococcus aureus (strain bovine RF122 / ET3-1) (taxid: 273036) confident COG1109::{ManB} Phosphomannomutase [Carbohydrate transport and metabolism] 100.00::29-453 PF02878::PGM_PMM_I 100.00::32-170 GO:0005829::cytosol confident hh_1wqa_A_1::33-46,50-72,75-105,107-111,113-172,174-181,184-185,188-191,194-210,212-246,248-249,252-262,264-270,272-303,306-308,311-331,341-382,388-423,427-440,442-454 very confident psy232 299 P57750::Phosphoacetylglucosamine mutase ::Interconverts GlcNAc-6-P and GlcNAc-1-P.::Arabidopsis thaliana (taxid: 3702) portable COG1109::{ManB} Phosphomannomutase [Carbohydrate transport and metabolism] 100.00::9-299 PF02879::PGM_PMM_II 99.81::42-156 GO:0005634::nucleus confident hh_2dka_A_1::66-92,95-105,107-130,132-296 very confident psy5980 103 P39671::Phosphoglucomutase ::This enzyme participates in both the breakdown and synthesis of glucose. Required for the synthesis of capsular polysaccharide and normal lipopolysaccharide.::Rhizobium radiobacter (taxid: 358) confident COG1109::{ManB} Phosphomannomutase [Carbohydrate transport and metabolism] 99.67::5-103 PF02879::PGM_PMM_II 99.82::16-102 GO:0032502::developmental process confident hh_1kfi_A_1::7-37,43-102 very confident psy12282 309 P38652::Phosphoglucomutase-1 ::This enzyme participates in both the breakdown and synthesis of glucose.::Rattus norvegicus (taxid: 10116) confident COG1109::{ManB} Phosphomannomutase [Carbohydrate transport and metabolism] 100.00::1-289 PF02880::PGM_PMM_III 99.94::11-126 GO:0005829::cytosol confident hh_1kfi_A_1::2-4,6-26,29-30,32-155,158-159,161-163,170-170,172-188,230-271,274-309 very confident psy16 87 Q5R979::Glucose 1,6-bisphosphate synthase ::Glucose 1,6-bisphosphate synthase using 1,3-bisphosphoglycerate as a phosphate donor and a series of 1-phosphate sugars as acceptors, including glucose 1-phosphate, mannose 1-phosphate, ribose 1-phosphate and deoxyribose 1-phosphate. 5 or 6-phosphosugars are bad substrates, with the exception of glucose 6-phosphate. Also synthesizes ribose 1,5-bisphosphate. Has only low phosphopentomutase and phosphoglucomutase activities.::Pongo abelii (taxid: 9601) confident COG1109::{ManB} Phosphomannomutase [Carbohydrate transport and metabolism] 99.71::3-83 PF02880::PGM_PMM_III 99.92::3-87 GO:0044464::cell part confident hh_2z0f_A_1::3-27,33-69,73-86 very confident psy3251 959 Q9VYS3::Regulator of nonsense transcripts 1 homolog ::RNA-dependent helicase and ATPase required for nonsense-mediated decay (NMD) of mRNAs containing premature stop codons. Is recruited to mRNAs upon translation termination and undergoes a cycle of phosphorylation and dephosphorylation; its phosphorylation appears to be a key step in NMD. The formation of an Upf1-Upf2-Upf3 surveillance complex is believed to activate NMD.::Drosophila melanogaster (taxid: 7227) very confident COG1112::Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] 100.00::124-943 PF09416::UPF1_Zn_bind 100.00::100-251 GO:0000785::chromatin confident hh_2xzl_A_1::95-195,199-331,386-605,607-661,663-948 very confident psy3902 181 Q9BXT6::Putative helicase Mov10l1 ::Putative RNA helicase. Isoform 1 may play a role in male germ cell development.::Homo sapiens (taxid: 9606) portable COG1112::Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] 99.86::44-181 PF13086::AAA_11 99.68::42-111 GO:0044699::single-organism process confident hh_2xzl_A_1::42-57,61-63,65-88,92-132,150-180 very confident psy16286 92 Q9P2E3::NFX1-type zinc finger-containing protein 1 ::::Homo sapiens (taxid: 9606) portable COG1112::Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] 99.32::1-63 PF13087::AAA_12 99.24::1-39 GO:0043234::protein complex confident hh_2xzl_A_1::1-41,43-64 very confident psy12660 294 Q8CFQ3::Intron-binding protein aquarius ::Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre-mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.::Mus musculus (taxid: 10090) confident COG1112::Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair] 99.86::19-175 PF13087::AAA_12 99.96::13-151 GO:0071013::catalytic step 2 spliceosome confident hh_2xzl_A_1::20-27,31-156,161-178 very confident psy4781 83 Q8GYB4::Cationic amino acid transporter 3, mitochondrial ::Permease involved in the transport of the cationic neutral or acidic amino acids.::Arabidopsis thaliana (taxid: 3702) portable COG1113::AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] 99.40::2-80 PF00324::AA_permease 99.15::1-82 GO:0015171::amino acid transmembrane transporter activity confident hh_3gia_A_1::1-39,43-80 very confident psy16475 299 Q9WTR6::Cystine/glutamate transporter ::Sodium-independent, high-affinity exchange of anionic amino acids with high specificity for anionic form of cystine and glutamate.::Mus musculus (taxid: 10090) portable COG1113::AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] 99.90::25-280 PF00324::AA_permease 99.75::58-236 GO:0015179::L-amino acid transmembrane transporter activity confident hh_3gia_A_1::60-122,126-153,155-170,172-172,174-228,236-251 confident psy9204 265 Q8BGK6::Y+L amino acid transporter 2 ::Involved in the sodium-independent uptake of dibasic amino acids and sodium-dependent uptake of some neutral amino acids. Requires co-expression with SLC3A2/4F2hc to mediate the uptake of arginine, leucine and glutamine. Also acts as an arginine/glutamine exchanger, following an antiport mechanism for amino acid transport, influencing arginine release in exchange for extracellular amino acids. Plays a role in nitric oxide synthesis via transport of L-arginine. Involved in the transport of L-arginine in monocytes. Reduces uptake of ornithine in retinal pigment epithelial cells.::Mus musculus (taxid: 10090) confident COG1113::AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] 99.83::85-264 PF13520::AA_permease_2 99.79::92-262 GO:0003333::amino acid transmembrane transport confident hh_3gia_A_1::87-123,126-180,182-200,202-205,207-261 very confident psy6072 107 O08812::Cationic amino acid transporter 3 ::Mediates the uptake of the cationic amino acids arginine, lysine and ornithine in a sodium-independent manner.::Rattus norvegicus (taxid: 10116) confident COG1113::AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] 98.85::48-104 PF13520::AA_permease_2 96.79::56-106 GO:0006629::lipid metabolic process confident hh_3l1l_A_1::50-82,85-106 confident psy930 89 Q8BGK6::Y+L amino acid transporter 2 ::Involved in the sodium-independent uptake of dibasic amino acids and sodium-dependent uptake of some neutral amino acids. Requires co-expression with SLC3A2/4F2hc to mediate the uptake of arginine, leucine and glutamine. Also acts as an arginine/glutamine exchanger, following an antiport mechanism for amino acid transport, influencing arginine release in exchange for extracellular amino acids. Plays a role in nitric oxide synthesis via transport of L-arginine. Involved in the transport of L-arginine in monocytes. Reduces uptake of ornithine in retinal pigment epithelial cells.::Mus musculus (taxid: 10090) confident COG1113::AnsP Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism] 99.40::3-87 PF13520::AA_permease_2 99.49::1-88 GO:0032329::serine transport confident hh_4djk_A_1::1-3,5-32,34-88 confident psy850 280 Q9LZJ5::ABC transporter C family member 14 ::Pump for glutathione S-conjugates.::Arabidopsis thaliana (taxid: 3702) confident COG1116::TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] 100.00::68-229 PF00005::ABC_tran 99.96::71-212 GO:0005794::Golgi apparatus confident hh_2cbz_A_1::69-196,203-218 very confident psy9640 199 C3L5Y6::Uridine kinase ::::Bacillus anthracis (strain CDC 684 / NRRL 3495) (taxid: 568206) portable COG1116::TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism] 99.95::25-180 PF00005::ABC_tran 99.60::43-84 GO:0005829::cytosol confident hh_2jeo_A_1::40-45,47-117,119-124,133-150 very confident psy14062 388 Q8CG47::Structural maintenance of chromosomes protein 4 ::Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.::Mus musculus (taxid: 10090) portable COG1117::PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism] 100.00::74-324 PF00005::ABC_tran 99.83::102-283 GO:0044446::intracellular organelle part confident hh_3kta_A_1::74-91,104-111,134-134,136-155,160-164,166-173,190-217,222-226,228-274,276-285 very confident psy12735 233 Q8IVF4::Dynein heavy chain 10, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.::Homo sapiens (taxid: 9606) confident COG1120::FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] 99.85::26-201 PF00005::ABC_tran 99.36::50-142 GO:0005794::Golgi apparatus confident hh_3vkg_A_1::1-217 very confident psy7220 80 Q62K72::Nod factor export ATP-binding protein I ::Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.::Burkholderia mallei (strain ATCC 23344) (taxid: 243160) confident COG1120::FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] 99.87::8-74 PF00005::ABC_tran 99.71::24-74 GO:0009605::response to external stimulus confident rp_1vpl_A_1::18-80 very confident psy12072 76 Q9X196::Spermidine/putrescine import ATP-binding protein PotA ::Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.::Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) confident COG1120::FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] 99.84::2-73 PF00005::ABC_tran 99.72::23-74 GO:0071705::nitrogen compound transport confident hh_3tif_A_1::3-16,18-57,59-73 very confident psy832 80 no hit no match COG1120::FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] 99.76::4-79 PF02463::SMC_N 99.45::2-61 GO:0000790::nuclear chromatin confident no hit no match psy16868 109 Q5R4K5::Structural maintenance of chromosomes protein 3 ::Central component of cohesin, a complex required for chromosome cohesion during the cell cycle. The cohesin complex may form a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. Cohesion is coupled to DNA replication and is involved in DNA repair. The cohesin complex plays also an important role in spindle pole assembly during mitosis and in chromosomes movement.::Pongo abelii (taxid: 9601) confident COG1120::FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] 99.77::5-94 PF02463::SMC_N 99.71::2-89 GO:0016363::nuclear matrix confident hh_1e69_A_1::1-20,22-95 very confident psy13975 415 Q5RE09::Cytoplasmic dynein 1 light intermediate chain 2 ::Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.::Pongo abelii (taxid: 9601) confident COG1120::FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] 99.92::2-243 PF05783::DLIC 100.00::19-408 GO:0005813::centrosome confident hh_1tq4_A_1::4-16,20-51,53-59,68-75,78-83,92-99,101-117,119-119,121-125,129-146,179-247 confident psy1747 68 A2REY5::tRNA dimethylallyltransferase ::Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A).::Streptococcus pyogenes serotype M5 (strain Manfredo) (taxid: 160491) confident COG1120::FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism] 99.26::4-38 PF13207::AAA_17 99.19::15-46 GO:0005829::cytosol confident hh_3eph_A_1::14-62 very confident psy310 240 Q64343::ATP-binding cassette sub-family G member 1 ::Transporter involved in macrophage lipid homeostasis. Is an active component of the macrophage lipid export complex. Could also be involved in intracellular lipid transport processes. The role in cellular lipid homeostasis may not be limited to macrophages.::Mus musculus (taxid: 10090) confident COG1123::ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] 99.97::43-228 PF00005::ABC_tran 99.83::45-180 GO:0005548::phospholipid transporter activity confident hh_2olj_A_1::31-78,80-130,133-180 very confident psy7366 566 O35600::Retinal-specific ATP-binding cassette transporter ::In the visual cycle, acts as an inward-directed retinoid flipase, retinoid substrates imported by ABCA4 from the extracellular or intradiscal (rod) membrane surfaces to the cytoplasmic membrane surface are all-trans-retinaldehyde (ATR) and N-retinyl-phosphatidyl-ethanolamine (NR-PE). Once transported to the cytoplasmic surface, ATR is reduced to vitamin A by trans-retinol dehydrogenase (tRDH) and then transferred to the retinal pigment epithelium (RPE) where it is converted to 11-cis-retinal. May play a role in photoresponse, removing ATR/NR-PE from the extracellular photoreceptor surfaces during bleach recovery.::Mus musculus (taxid: 10090) confident COG1123::ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] 100.00::1-564 PF00005::ABC_tran 99.98::362-506 GO:0042221::response to chemical stimulus confident hh_2ihy_A_1::341-353,358-564 very confident psy8953 286 Q9C6W5::ABC transporter G family member 14 ::::Arabidopsis thaliana (taxid: 3702) portable COG1123::ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] 100.00::1-282 no hit no match GO:0005739::mitochondrion confident hh_4a82_A_1::1-13,15-50,52-62,68-114,116-128,130-130,132-156 very confident psy7365 601 Q8T6J5::ABC transporter A family member 2 ::::Dictyostelium discoideum (taxid: 44689) portable COG1123::ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] 100.00::49-524 no hit no match GO:0043231::intracellular membrane-bounded organelle confident hh_2yz2_A_1::50-84,87-91,98-122,125-156,158-201,240-242,278-306,312-347 very confident psy10223 606 Q08234::Uncharacterized ABC transporter ATP-binding protein/permease YOL075C ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::37-249 PF00005::ABC_tran 99.97::43-189 GO:0005488::binding confident hh_2ihy_A_1::37-78,80-209,211-221,223-249 very confident psy10236 515 Q9DBM0::ATP-binding cassette sub-family G member 8 ::Transporter that appears to play an indispensable role in the selective transport of the dietary cholesterol in and out of the enterocytes and in the selective sterol excretion by the liver into bile.::Mus musculus (taxid: 10090) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::38-269 PF00005::ABC_tran 99.98::57-203 GO:0005488::binding confident hh_1yqt_A_1::37-49,52-53,55-100,111-141,150-224,231-239,241-270 very confident psy7367 251 P41234::ATP-binding cassette sub-family A member 2 ::Probable transporter, its natural substrate has not been found yet. May have a role in macrophage lipid metabolism and neural development.::Mus musculus (taxid: 10090) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::1-220 PF00005::ABC_tran 100.00::17-161 GO:0005524::ATP binding confident hh_2ihy_A_1::1-11,13-218 very confident psy18211 127 Q8NC60::Nitric oxide-associated protein 1 ::Involved in regulation of mitochondrial protein translation and respiration. Plays a role in mitochondria-mediated cell death. May act as a scaffolding protein or stabilizer of respiratory chain supercomplexes. Binds GTP.::Homo sapiens (taxid: 9606) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::5-127 PF00005::ABC_tran 99.93::22-127 GO:0005525::GTP binding confident hh_2d2e_A_1::6-126 very confident psy317 137 P54537::Arginine transport ATP-binding protein ArtM ::Part of a binding-protein-dependent transport system for arginine. Probably responsible for energy coupling to the transport system.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::11-137 PF00005::ABC_tran 99.58::44-95 GO:0005548::phospholipid transporter activity confident hh_2olj_A_1::12-31,35-40,43-116,120-137 very confident psy1497 127 Q9H172::ATP-binding cassette sub-family G member 4 ::May be involved in macrophage lipid homeostasis.::Homo sapiens (taxid: 9606) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::3-127 PF00005::ABC_tran 99.90::2-127 GO:0005548::phospholipid transporter activity confident hh_4f4c_A_2::3-9,11-20,22-57,59-69,75-127 confident psy2071 302 O43143::Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ::Pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA.::Homo sapiens (taxid: 9606) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::58-248 PF00005::ABC_tran 99.85::69-189 GO:0005689::U12-type spliceosomal complex confident bp_2xau_A_1::38-248 very confident psy10858 457 Q8WWZ4::ATP-binding cassette sub-family A member 10 ::Probable transporter which may play a role in macrophage lipid homeostasis.::Homo sapiens (taxid: 9606) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::88-319 PF00005::ABC_tran 100.00::107-251 GO:0005773::vacuole confident hh_2ihy_A_1::87-101,104-311,315-321 very confident psy16304 537 Q54UF1::ADP-ribosylation factor-like protein 2 ::May be involved in trafficking events within the endosomal system.::Dictyostelium discoideum (taxid: 44689) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.94::152-416 PF00005::ABC_tran 99.50::188-361 GO:0005829::cytosol confident hh_1m2o_B_1::195-239,241-264,276-296 very confident psy2681 211 Q767L0::ATP-binding cassette sub-family F member 1 ::Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis.::Sus scrofa (taxid: 9823) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::3-181 PF00005::ABC_tran 99.83::4-125 GO:0005829::cytosol confident hh_2olj_A_1::3-13,15-52,55-91,93-173,175-182 very confident psy2689 262 Q9M1H3::ABC transporter F family member 4 ::::Arabidopsis thaliana (taxid: 3702) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::59-262 PF00005::ABC_tran 99.96::72-259 GO:0005829::cytosol confident hh_1oxx_K_1::59-102,105-128,133-141,148-150,154-155,171-177,187-195,197-220,222-262 very confident psy6612 291 Q62K72::Nod factor export ATP-binding protein I ::Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.::Burkholderia mallei (strain ATCC 23344) (taxid: 243160) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::19-230 PF00005::ABC_tran 100.00::35-170 GO:0005886::plasma membrane confident hh_2ihy_A_1::18-229 very confident psy1505 79 Q6Y306::Multidrug resistance-associated protein 9 ::Probable transporter.::Rattus norvegicus (taxid: 10116) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.92::8-77 PF00005::ABC_tran 99.50::12-46 GO:0005887::integral to plasma membrane confident no hit no match psy16753 156 Q84TH5::ABC transporter G family member 25 ::::Arabidopsis thaliana (taxid: 3702) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.98::9-142 PF00005::ABC_tran 99.86::9-136 GO:0006869::lipid transport confident hh_3bk7_A_1::9-20,25-32,43-72,80-128,131-144 very confident psy10472 181 Q5RKI8::ATP-binding cassette sub-family B member 8, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::5-177 PF00005::ABC_tran 99.90::12-134 GO:0009506::plasmodesma confident hh_2ff7_A_1::9-70,72-172,174-176 very confident psy8397 203 Q9H172::ATP-binding cassette sub-family G member 4 ::May be involved in macrophage lipid homeostasis.::Homo sapiens (taxid: 9606) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::7-185 PF00005::ABC_tran 99.51::8-83 GO:0015850::organic hydroxy compound transport confident hh_2ihy_A_1::7-115,159-185 very confident psy860 178 O95477::ATP-binding cassette sub-family A member 1 ::cAMP-dependent and sulfonylurea-sensitive anion transporter. Key gatekeeper influencing intracellular cholesterol transport.::Homo sapiens (taxid: 9606) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::7-176 PF00005::ABC_tran 99.97::16-170 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_3fvq_A_1::10-27,32-44,52-177 very confident psy17960 137 P41233::ATP-binding cassette sub-family A member 1 ::cAMP-dependent and sulfonylurea-sensitive anion transporter. Key gatekeeper influencing intracellular cholesterol transport.::Mus musculus (taxid: 10090) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::6-137 PF00005::ABC_tran 99.74::7-94 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2ihy_A_1::8-114,116-136 very confident psy4634 249 Q8GNH6::Nod factor export ATP-binding protein I ::Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.::Rhizobium meliloti (taxid: 382) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::8-162 PF00005::ABC_tran 99.66::8-95 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2olj_A_1::9-156 very confident psy5634 79 P55476::Nod factor export ATP-binding protein I ::Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.::Rhizobium sp. (strain NGR234) (taxid: 394) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.97::1-76 PF00005::ABC_tran 99.50::3-33 GO:0031090::organelle membrane confident hh_2olj_A_1::2-53,55-76 very confident psy8250 212 P12428::Protein brown ::Part of a membrane-spanning permease system necessary for the transport of pigment precursors into pigment cells responsible for eye color. Brown and white dimerize for the transport of guanine.::Drosophila melanogaster (taxid: 7227) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::1-210 PF00005::ABC_tran 100.00::14-160 GO:0033993::response to lipid confident hh_2olj_A_1::1-50,52-98,102-210 very confident psy6983 210 Q9R088::Thymidine kinase 2, mitochondrial ::Deoxyribonucleoside kinase that phosphorylates thymidine, deoxycytidine, and deoxyuridine. Also phosphorylates anti-viral and anti-cancer nucleoside analogs.::Mus musculus (taxid: 10090) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.96::31-208 PF00005::ABC_tran 99.62::50-188 GO:0034654::nucleobase-containing compound biosynthetic process confident hh_1p5z_B_1::55-187,190-204 very confident psy17517 163 Q9Z1M9::Structural maintenance of chromosomes protein 1A ::Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, or via its phosphorylation by ATR. Works as a downstream effector both in the ATM/NBS1 branch and in the ATR/MSH2 branch of S-phase checkpoint.::Rattus norvegicus (taxid: 10116) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::8-162 PF00005::ABC_tran 99.95::22-149 GO:0034991::nuclear meiotic cohesin complex confident hh_2ihy_A_1::8-15,19-28,30-40,42-50,52-102,107-132,137-163 very confident psy6940 123 O07016::Uncharacterized ABC transporter ATP-binding protein YvfR ::::Bacillus subtilis (strain 168) (taxid: 224308) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.97::8-96 PF00005::ABC_tran 99.49::7-55 GO:0042221::response to chemical stimulus confident hh_2olj_A_1::7-97,99-113 very confident psy106 321 Q39GT7::Nod factor export ATP-binding protein I ::Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.::Burkholderia sp. (strain 383) (taxid: 269483) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::7-227 PF00005::ABC_tran 100.00::26-161 GO:0042221::response to chemical stimulus confident hh_2ihy_A_1::6-20,23-220 very confident psy4761 131 Q8T674::ABC transporter G family member 20 ::::Dictyostelium discoideum (taxid: 44689) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.98::44-131 PF00005::ABC_tran 99.38::44-89 GO:0042221::response to chemical stimulus confident hh_2ihy_A_1::44-131 very confident psy13765 606 Q9H172::ATP-binding cassette sub-family G member 4 ::May be involved in macrophage lipid homeostasis.::Homo sapiens (taxid: 9606) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::28-283 PF00005::ABC_tran 99.95::52-203 GO:0042803::protein homodimerization activity confident hh_2ihy_A_1::26-38,47-88,90-131,133-139,141-160,164-235,237-262 very confident psy2520 290 P45843::Protein scarlet ::Part of a membrane-spanning permease system necessary for the transport of pigment precursors into pigment cells responsible for eye color. Scarlet and white complex transports a metabolic intermediate (such as 3-hydroxy kynurenine) from the cytoplasm into the pigment granules.::Drosophila melanogaster (taxid: 7227) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::4-219 PF00005::ABC_tran 100.00::4-158 GO:0043234::protein complex confident hh_2ihy_A_1::4-40,44-119,128-178,180-191,193-219 very confident psy4235 197 Q4GZT4::ATP-binding cassette sub-family G member 2 ::Xenobiotic transporter that may play an important role in the exclusion of xenobiotics from the brain. May be involved in brain-to-blood efflux.::Bos taurus (taxid: 9913) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::1-194 PF00005::ABC_tran 100.00::1-131 GO:0043234::protein complex confident hh_2ihy_A_1::1-20,22-163,165-178,180-192 very confident psy11928 184 Q767L0::ATP-binding cassette sub-family F member 1 ::Required for efficient Cap- and IRES-mediated mRNA translation initiation. Not involved in the ribosome biogenesis.::Sus scrofa (taxid: 9823) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::2-159 PF00005::ABC_tran 99.74::2-103 GO:0043234::protein complex confident hh_2olj_A_1::2-30,33-68,70-151,153-159 very confident psy10767 149 Q1RFH8::Taurine import ATP-binding protein TauB ::Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system.::Escherichia coli (strain UTI89 / UPEC) (taxid: 364106) portable COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::4-147 PF00005::ABC_tran 100.00::6-140 GO:0044765::single-organism transport confident hh_2ihy_A_1::4-67,71-108,111-147 very confident psy12625 612 Q9H172::ATP-binding cassette sub-family G member 4 ::May be involved in macrophage lipid homeostasis.::Homo sapiens (taxid: 9606) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::20-279 PF00005::ABC_tran 99.97::46-197 GO:0055037::recycling endosome confident hh_2ihy_A_1::18-30,41-82,88-229,231-257 very confident psy858 72 no hit no match COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.97::1-72 PF00005::ABC_tran 99.58::8-42 GO:0071705::nitrogen compound transport confident hh_2olj_A_1::1-72 very confident psy2519 622 Q55DA0::ABC transporter G family member 22 ::May be involved in cell migration.::Dictyostelium discoideum (taxid: 44689) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::17-261 PF00005::ABC_tran 99.94::35-200 GO:1901564::organonitrogen compound metabolic process confident hh_2olj_A_1::17-27,30-42,48-59,65-81,85-131,135-163,172-219,221-232,234-261 very confident psy5297 185 O24617::DNA mismatch repair protein MSH2 ::Involved in postreplication mismatch repair. Binds specifically to DNA containing mismatched nucleotides thus providing a target for the excision repair processes characteristic of postreplication mismatch repair.::Arabidopsis thaliana (taxid: 3702) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::5-185 PF00488::MutS_V 99.97::3-178 GO:0045910::negative regulation of DNA recombination confident hh_1wb9_A_1::3-32,34-182 very confident psy17514 159 Q54PK4::Structural maintenance of chromosomes protein 2 ::Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.::Dictyostelium discoideum (taxid: 44689) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 100.00::5-158 PF02463::SMC_N 99.73::2-145 GO:0000785::chromatin confident hh_1e69_A_1::1-20,22-86,98-139,141-159 very confident psy1506 85 Q6Y306::Multidrug resistance-associated protein 9 ::Probable transporter.::Rattus norvegicus (taxid: 10116) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.97::1-85 PF02463::SMC_N 99.28::1-72 GO:0005887::integral to plasma membrane confident hh_2cbz_A_1::1-84 very confident psy10474 79 P21440::Multidrug resistance protein 3 ::Mediates ATP-dependent export of organic anions and drugs from the cytoplasm. Hydrolyzes ATP with low efficiency. Not capable of conferring drug resistance. Mediates the translocation of phosphatidylcholine across the canalicular membrane of the hepatocyte.::Mus musculus (taxid: 10090) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.84::1-69 PF02463::SMC_N 98.45::1-50 GO:0046581::intercellular canaliculus confident bp_3g5u_A_1::7-77 very confident psy2657 163 Q9NYC9::Dynein heavy chain 9, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Homo sapiens (taxid: 9606) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.95::1-148 PF12775::AAA_7 100.00::2-163 GO:0043234::protein complex confident rp_3vkg_A_1::1-34,37-152 very confident psy6322 128 P55476::Nod factor export ATP-binding protein I ::Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4-linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.::Rhizobium sp. (strain NGR234) (taxid: 394) confident COG1126::GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] 99.96::1-107 PF13304::AAA_21 98.81::2-60 GO:0008509::anion transmembrane transporter activity confident hh_3gfo_A_1::1-67,79-99 very confident psy18009 277 Q48P40::Lipid A export ATP-binding/permease protein MsbA ::Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.::Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) (taxid: 264730) portable COG1129::MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism] 100.00::43-240 no hit no match GO:0009506::plasmodesma confident hh_3nh6_A_1::1-147 very confident psy846 103 Q54U44::ABC transporter C family member 12 ::::Dictyostelium discoideum (taxid: 44689) portable COG1132::MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms] 98.13::33-102 PF00664::ABC_membrane 98.55::41-102 GO:0043231::intracellular membrane-bounded organelle confident hh_3b60_A_1::36-102 confident psy16346 494 Q9C6W5::ABC transporter G family member 14 ::::Arabidopsis thaliana (taxid: 3702) confident COG1135::AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism] 99.93::2-118 PF01061::ABC2_membrane 99.86::206-427 GO:0044464::cell part confident hh_2ihy_A_1::3-20,26-77,79-90,92-118 very confident psy17516 264 Q54PK4::Structural maintenance of chromosomes protein 2 ::Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.::Dictyostelium discoideum (taxid: 44689) confident COG1136::SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] 100.00::32-253 PF02463::SMC_N 99.81::171-255 GO:0000217::DNA secondary structure binding confident hh_3kta_B_1::111-260 very confident psy4925 160 A8GTS0::NADH-quinone oxidoreductase subunit I ::NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.::Rickettsia rickettsii (strain Sheila Smith) (taxid: 392021) very confident COG1143::NuoI Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion] 99.96::3-147 PF14697::Fer4_21 99.42::56-117 GO:0006979::response to oxidative stress very confident rp_3i9v_9_1::10-160 very confident psy3865 107 P55072::Transitional endoplasmic reticulum ATPase ::Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. Regulates E3 ubiquitin-protein ligase activity of RNF19A (By similarity). Component of the VCP/p97-AMFR/gp78 complex that participates in the final step of the sterol-mediated ubiquitination and endoplasmic reticulum-associated degradation (ERAD) of HMGCR.::Homo sapiens (taxid: 9606) confident COG1153::FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion] 96.58::10-76 PF02359::CDC48_N 99.80::13-85 GO:0006200::ATP catabolic process confident hh_3tiw_A_1::15-107 very confident psy13480 615 Q27331::V-type proton ATPase catalytic subunit A isoform 2 ::Catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) very confident COG1155::NtpA Archaeal/vacuolar-type H+-ATPase subunit A [Energy production and conversion] 100.00::17-614 PF00006::ATP-synt_ab 100.00::227-453 GO:0005829::cytosol very confident hh_3mfy_A_1::16-114,116-136,138-298,301-559,566-571,574-585,587-587,590-590,593-593,597-614 very confident psy6464 96 P22068::ATP synthase subunit beta, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Subunits alpha and beta form the catalytic core in F(1). Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) very confident COG1157::FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] 100.00::2-93 PF00006::ATP-synt_ab 100.00::1-93 GO:0005509::calcium ion binding very confident hh_2ck3_D_1::1-25,27-93 very confident psy2897 467 Q0I5X3::ATP synthase subunit beta ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.::Haemophilus somnus (strain 129Pt) (taxid: 205914) very confident COG1157::FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] 100.00::3-438 PF00006::ATP-synt_ab 100.00::127-347 GO:0005509::calcium ion binding very confident hh_1sky_E_1::1-199,207-466 very confident psy2896 467 Q0I5X3::ATP synthase subunit beta ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.::Haemophilus somnus (strain 129Pt) (taxid: 205914) very confident COG1157::FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] 100.00::3-438 PF00006::ATP-synt_ab 100.00::127-347 GO:0005509::calcium ion binding very confident hh_1sky_E_1::1-199,207-466 very confident psy5597 204 Q9SZN1::V-type proton ATPase subunit B2 ::Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Arabidopsis thaliana (taxid: 3702) confident COG1157::FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] 100.00::28-203 PF00006::ATP-synt_ab 98.61::141-203 GO:0042995::cell projection confident hh_3gqb_B_1::30-36,38-77,79-165,168-203 very confident psy5596 154 P31409::V-type proton ATPase subunit B ::Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) very confident COG1157::FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] 100.00::1-124 PF00306::ATP-synt_ab_C 99.20::56-125 GO:0005829::cytosol very confident hh_3gqb_B_1::1-106,108-145 very confident psy271 191 A9WWS4::ATP synthase subunit alpha ::Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.::Brucella suis (strain ATCC 23445 / NCTC 10510) (taxid: 470137) confident COG1157::FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] 99.65::2-101 PF01485::IBR 98.59::120-158 GO:0042288::MHC class I protein binding confident hh_1fx0_A_1::1-99 very confident psy5598 128 P31409::V-type proton ATPase subunit B ::Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) confident COG1157::FliI Flagellar biosynthesis/type III secretory pathway ATPase [Cell motility and secretion / Intracellular trafficking and secretion] 99.91::23-126 PF02874::ATP-synt_ab_N 99.32::31-97 GO:0005794::Golgi apparatus very confident hh_3gqb_B_1::25-89,91-126 very confident psy3765 592 Q06447::Transcription termination factor Rho ::Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template.::Neisseria gonorrhoeae (taxid: 485) confident COG1158::Rho Transcription termination factor [Transcription] 100.00::1-375 PF00006::ATP-synt_ab 100.00::116-324 GO:0005618::cell wall confident hh_3ice_A_1::2-375 very confident psy3450 432 Q96S21::Ras-related protein Rab-40C ::Probable substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Homo sapiens (taxid: 9606) confident COG1159::Era GTPase [General function prediction only] 99.91::60-318 PF00071::Ras 99.97::62-236 GO:0043234::protein complex confident hh_2bcg_Y_1::57-80,82-86,96-104,110-244 very confident psy13475 468 Q90577::Sarcalumenin ::May be involved in the regulation of calcium transport.::Gallus gallus (taxid: 9031) confident COG1159::Era GTPase [General function prediction only] 100.00::93-376 PF00350::Dynamin_N 99.76::98-257 GO:0019904::protein domain specific binding confident hh_2qpt_A_1::53-122,125-334,339-346,350-369,371-376,379-417,425-450 very confident psy5031 281 Q9VC57::Atlastin ::GTPase tethering membranes through formation of trans-homooligomer and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis. May also regulate microtubule polymerization and Golgi biogenesis. Required for dopaminergic neurons survival and the growth of muscles and synapses at neuromuscular junctions.::Drosophila melanogaster (taxid: 7227) confident COG1159::Era GTPase [General function prediction only] 97.14::53-79 PF02263::GBP 100.00::32-281 GO:0051260::protein homooligomerization confident hh_3q5d_A_1::16-83,161-281 very confident psy5032 193 Q9VC57::Atlastin ::GTPase tethering membranes through formation of trans-homooligomer and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis. May also regulate microtubule polymerization and Golgi biogenesis. Required for dopaminergic neurons survival and the growth of muscles and synapses at neuromuscular junctions.::Drosophila melanogaster (taxid: 7227) confident COG1159::Era GTPase [General function prediction only] 98.01::14-39 PF02263::GBP 100.00::2-187 GO:0051260::protein homooligomerization confident hh_3q5d_A_1::2-42,48-182 very confident psy6316 259 O60841::Eukaryotic translation initiation factor 5B ::Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.::Homo sapiens (taxid: 9606) confident COG1159::Era GTPase [General function prediction only] 99.97::20-252 PF02421::FeoB_N 99.91::26-201 GO:0022627::cytosolic small ribosomal subunit confident hh_1g7s_A_1::21-82,89-161 very confident psy871 249 P0C951::Small COPII coat GTPase SAR1 ::Small GTPase component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. Sar1 controls the coat assembly in a stepwise manner. Activated Sar1-GTP binds to membranes first and recruits the sec23/24 complex. These sec23/24-sar1 prebudding intermediates are then collected by the Sec13/31 complex as subunits polymerize to form coated transport vesicles. Conversion to sar1-GDP triggers coat release and recycles COPII subunits.::Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) confident COG1160::Predicted GTPases [General function prediction only] 99.93::66-247 PF00025::Arf 99.97::8-248 GO:0005811::lipid particle confident hh_1f6b_A_1::1-60,110-132,139-249 very confident psy15725 355 P20340::Ras-related protein Rab-6A ::Protein transport. Regulator of membrane traffic from the Golgi apparatus towards the endoplasmic reticulum (ER). Has a low GTPase activity.::Homo sapiens (taxid: 9606) confident COG1160::Predicted GTPases [General function prediction only] 99.93::14-348 PF00071::Ras 99.95::15-343 GO:0005829::cytosol very confident bp_2y8e_A_2::228-346 very confident psy3029 617 Q5RBG1::Ras-related protein Rab-5B ::Protein transport. Probably involved in vesicular traffic.::Pongo abelii (taxid: 9601) portable COG1160::Predicted GTPases [General function prediction only] 99.94::115-394 PF00071::Ras 99.95::115-268 GO:0005856::cytoskeleton confident hh_1ek0_A_1::115-267 very confident psy16673 373 Q5PR73::GTP-binding protein Di-Ras2 ::Displays low GTPase activity and exist predominantly in the GTP-bound form.::Mus musculus (taxid: 10090) portable COG1160::Predicted GTPases [General function prediction only] 99.97::11-367 PF00071::Ras 99.97::12-348 GO:0031982::vesicle confident hh_2g6b_A_1::7-59,145-197,200-216,308-349 very confident psy14768 452 O14966::Ras-related protein Rab-7L1 ::::Homo sapiens (taxid: 9606) portable COG1160::Predicted GTPases [General function prediction only] 100.00::109-414 PF00071::Ras 99.95::242-409 GO:0043234::protein complex confident hh_1mh1_A_1::239-277,279-284,288-344,350-411 very confident psy10878 131 O14966::Ras-related protein Rab-7L1 ::::Homo sapiens (taxid: 9606) confident COG1160::Predicted GTPases [General function prediction only] 99.88::1-130 PF00071::Ras 99.62::72-131 GO:0045335::phagocytic vesicle confident hh_2gf9_A_1::64-114,116-131 very confident psy125 385 P62827::GTP-binding nuclear protein Ran ::GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. The complex with BIRC5/survivin plays a role in mitotic spindle formation by serving as a physical scaffold to help deliver the RAN effector molecule TPX2 to microtubules. Acts as a negative regulator of the kinase activity of VRK1 and VRK2.::Mus musculus (taxid: 10090) very confident COG1160::Predicted GTPases [General function prediction only] 100.00::10-338 PF00071::Ras 99.93::11-168 GO:0072686::mitotic spindle very confident bp_3gj0_A_1::9-206 very confident psy5059 1036 Q8K1M6::Dynamin-1-like protein ::Functions in mitochondrial and peroxisomal division. Mediates membrane fission through oligomerization into ring-like structures which wrap around the scission site to constict and sever the mitochondrial membrane through a GTP hydrolysis-dependent mechanism. Required for normal brain development. Facilitates developmentally-regulated apoptosis during neural tube development. Required for a normal rate of cytochrome c release and caspase activation during apoptosis. Also required for mitochondrial fission during mitosis. May be involved in vesicle transport.::Mus musculus (taxid: 10090) portable COG1160::Predicted GTPases [General function prediction only] 99.97::7-470 PF01031::Dynamin_M 100.00::767-945 GO:0005525::GTP binding confident hh_1jwy_B_1::61-132,141-143,187-296,368-399,486-580 very confident psy17089 419 Q13X32::GTPase Der ::GTPase that plays an essential role in the late steps of ribosome biogenesis.::Burkholderia xenovorans (strain LB400) (taxid: 266265) very confident COG1160::Predicted GTPases [General function prediction only] 100.00::1-419 PF02421::FeoB_N 99.95::183-348 GO:0005618::cell wall confident hh_2hjg_A_1::1-64,66-167,176-419 very confident psy11743 551 Q641Z6::EH domain-containing protein 1 ::Acts in early endocytic membrane fusion and membrane trafficking of recycling endosomes.::Rattus norvegicus (taxid: 10116) confident COG1160::Predicted GTPases [General function prediction only] 100.00::56-477 PF02421::FeoB_N 99.82::58-252 GO:0016887::ATPase activity confident hh_2qpt_A_1::1-251 very confident psy3301 608 Q298L5::Mitochondrial Rho GTPase ::Mitochondrial GTPase involved in mitochondrial trafficking. Probably involved in control of anterograde transport of mitochondria and their subcellular distribution.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG1160::Predicted GTPases [General function prediction only] 99.88::11-149 PF08356::EF_assoc_2 99.94::207-295 GO:0005829::cytosol confident hh_1mh1_A_1::8-109,112-158 very confident psy17467 730 Q17QB7::Ras-related protein Rab-30 ::::Bos taurus (taxid: 9913) confident COG1160::Predicted GTPases [General function prediction only] 99.95::7-355 PF09735::Nckap1 100.00::386-700 GO:0005801::cis-Golgi network confident bp_2ew1_A_1::1-119 very confident psy3589 604 Q5RA07::Guanine nucleotide-binding protein-like 1 ::Possible regulatory or functional link with the histocompatibility cluster.::Pongo abelii (taxid: 9601) confident COG1161::Predicted GTPases [General function prediction only] 99.97::176-523 PF00005::ABC_tran 99.24::368-399 GO:0006974::response to DNA damage stimulus confident no hit no match psy8220 161 Q9NVN8::Guanine nucleotide-binding protein-like 3-like protein ::Required for normal processing of ribosomal pre-rRNA. Required for cell proliferation. Binds GTP.::Homo sapiens (taxid: 9606) portable COG1161::Predicted GTPases [General function prediction only] 99.91::5-160 PF00009::GTP_EFTU 99.39::5-135 GO:0005730::nucleolus confident hh_1puj_A_1::6-11,13-17,19-49,53-69,78-89,91-103,121-160 very confident psy3587 195 Q5RA07::Guanine nucleotide-binding protein-like 1 ::Possible regulatory or functional link with the histocompatibility cluster.::Pongo abelii (taxid: 9601) confident COG1161::Predicted GTPases [General function prediction only] 100.00::21-177 PF02421::FeoB_N 99.22::22-81 GO:0006974::response to DNA damage stimulus confident no hit no match psy15351 352 Q9VCU5::Mitochondrial GTPase 1 ::Mitochondrial GTPase. May be involved in assembly of the large ribosomal subunit.::Drosophila melanogaster (taxid: 7227) confident COG1161::Predicted GTPases [General function prediction only] 100.00::1-345 PF03193::DUF258 99.59::61-294 GO:0005739::mitochondrion confident hh_3cnl_A_1::1-36,38-39,42-73,77-77,79-85,88-100,168-190,196-212,214-217,220-242,252-285,288-289,291-307,317-346 very confident psy9995 595 Q9W590::Large subunit GTPase 1 homolog ::GTPase required for the nuclear export of the 60S ribosomal subunit. Probably acts by mediating the release of NMD3 from the 60S ribosomal subunit after export into the cytoplasm (By similarity). Regulator of body size; acts in serotonergic neurons to regulate insulin signaling and thus exert global growth control.::Drosophila melanogaster (taxid: 7227) very confident COG1161::Predicted GTPases [General function prediction only] 100.00::157-488 PF03193::DUF258 99.36::221-382 GO:0043332::mating projection tip confident hh_3cnl_A_1::161-193,195-196,202-234,236-244,300-310,322-388,397-415,417-427,434-434,442-486 very confident psy6781 534 P53742::Nucleolar GTP-binding protein 2 ::GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) very confident COG1161::Predicted GTPases [General function prediction only] 100.00::228-493 PF08153::NGP1NT 100.00::71-201 GO:0044732::mitotic spindle pole body confident hh_3cnl_A_1::223-225,228-265,267-268,274-305,309-329,338-398,400-400,402-412,416-443,445-446,448-493 very confident psy7063 188 Q58D56::Developmentally-regulated GTP-binding protein 2 ::May play a role in cell proliferation, differentiation and death.::Bos taurus (taxid: 9913) confident COG1163::DRG Predicted GTPase [General function prediction only] 100.00::43-188 PF00009::GTP_EFTU 98.59::59-136 GO:0005739::mitochondrion confident hh_4a9a_A_1::84-188 very confident psy6249 119 Q9LQK0::Developmentally regulated G-protein 1 ::Binds GDP and GTP, and has low GTPase activity. May interact with phosphatidic acid (PA).::Arabidopsis thaliana (taxid: 3702) confident COG1163::DRG Predicted GTPase [General function prediction only] 99.95::2-119 PF02421::FeoB_N 99.91::2-108 GO:0005739::mitochondrion very confident hh_1udx_A_1::3-117 very confident psy2924 225 P32233::Developmentally-regulated GTP-binding protein 1 ::Critical regulator of cell growth under specific conditions. Implicated in differentiation and cell cycle arrest.::Mus musculus (taxid: 10090) very confident COG1163::DRG Predicted GTPase [General function prediction only] 100.00::1-225 PF02421::FeoB_N 99.73::51-142 GO:0045111::intermediate filament cytoskeleton very confident hh_4a9a_A_1::1-225 very confident psy2927 123 P32233::Developmentally-regulated GTP-binding protein 1 ::Critical regulator of cell growth under specific conditions. Implicated in differentiation and cell cycle arrest.::Mus musculus (taxid: 10090) confident COG1163::DRG Predicted GTPase [General function prediction only] 100.00::1-122 PF02824::TGS 99.65::47-121 GO:0045111::intermediate filament cytoskeleton confident hh_2eki_A_1::41-69,71-122 very confident psy7060 160 Q58D56::Developmentally-regulated GTP-binding protein 2 ::May play a role in cell proliferation, differentiation and death.::Bos taurus (taxid: 9913) confident COG1163::DRG Predicted GTPase [General function prediction only] 100.00::1-160 no hit no match GO:0051286::cell tip confident hh_4a9a_A_1::1-52,89-160 very confident psy17158 686 Q9GLN7::Angiotensin-converting enzyme ::Converts angiotensin I to angiotensin II by release of the terminal His-Leu, this results in an increase of the vasoconstrictor activity of angiotensin. Also able to inactivate bradykinin, a potent vasodilator. Has also a glycosidase activity which releases GPI-anchored proteins from the membrane by cleaving the mannose linkage in the GPI moiety.::Pan troglodytes (taxid: 9598) portable COG1164::Oligoendopeptidase F [Amino acid transport and metabolism] 99.77::148-681 PF01401::Peptidase_M2 100.00::195-686 GO:0005615::extracellular space confident hh_3nxq_A_1::196-213,221-238,242-254,256-313,318-322,324-600,602-686 very confident psy3039 118 Q9GLN7::Angiotensin-converting enzyme ::Converts angiotensin I to angiotensin II by release of the terminal His-Leu, this results in an increase of the vasoconstrictor activity of angiotensin. Also able to inactivate bradykinin, a potent vasodilator. Has also a glycosidase activity which releases GPI-anchored proteins from the membrane by cleaving the mannose linkage in the GPI moiety.::Pan troglodytes (taxid: 9598) confident COG1164::Oligoendopeptidase F [Amino acid transport and metabolism] 92.02::43-90 PF01401::Peptidase_M2 100.00::1-109 GO:0008144::drug binding confident hh_3nxq_A_1::1-107 very confident psy5622 269 Q7A5L8::L-threonine dehydratase catabolic TdcB ::Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.::Staphylococcus aureus (strain N315) (taxid: 158879) confident COG1171::IlvA Threonine dehydratase [Amino acid transport and metabolism] 100.00::19-269 PF00291::PALP 100.00::15-268 GO:0005509::calcium ion binding confident hh_2d1f_A_1::13-63,65-145,157-202,204-227,232-237,240-268 very confident psy9339 258 Q5PPI9::Probable tubulin polyglutamylase TTLL1 ::Catalytic subunit of the neuronal tubulin polyglutamylase complex. Modifies alpha- and beta-tubulin, generating side chains of glutamate on the gamma-carboxyl groups of specific glutamate residues within the C-terminal tail of alpha- and beta-tubulin.::Rattus norvegicus (taxid: 10116) confident COG1181::DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] 97.20::119-179 PF03133::TTL 100.00::14-204 GO:0005929::cilium confident hh_3tig_A_1::17-47,50-70,73-178,188-191,195-217 very confident psy2507 111 Q6EMB2::Tubulin polyglutamylase TTLL5 ::Polyglutamylase which preferentially modifies alpha-tubulin. Involved in the side-chain initiation step of the polyglutamylation reaction rather than in the elongation step (By similarity). Increases the effects of NCOA2 in glucocorticoid receptor-mediated repression and induction and in androgen receptor-mediated induction.::Homo sapiens (taxid: 9606) confident COG1181::DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] 97.81::5-43 PF03133::TTL 99.73::2-62 GO:0044441::cilium part confident hh_3tig_A_1::3-34,41-54,59-69 very confident psy9332 148 Q5PPI9::Probable tubulin polyglutamylase TTLL1 ::Catalytic subunit of the neuronal tubulin polyglutamylase complex. Modifies alpha- and beta-tubulin, generating side chains of glutamate on the gamma-carboxyl groups of specific glutamate residues within the C-terminal tail of alpha- and beta-tubulin.::Rattus norvegicus (taxid: 10116) confident COG1181::DdlA D-alanine-D-alanine ligase and related ATP-grasp enzymes [Cell envelope biogenesis, outer membrane] 98.01::21-86 PF03133::TTL 99.85::1-103 GO:0044446::intracellular organelle part confident hh_3tig_A_1::1-15,18-79,86-108 very confident psy17541 717 Q3T058::Translation initiation factor eIF-2B subunit delta ::Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.::Bos taurus (taxid: 9913) confident COG1184::GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] 100.00::398-712 PF01008::IF-2B 100.00::414-702 GO:0005829::cytosol confident hh_3ecs_A_1::418-440,445-464,466-504,506-663,670-710 very confident psy6494 87 Q54I81::Translation initiation factor eIF-2B subunit alpha ::Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.::Dictyostelium discoideum (taxid: 44689) confident COG1184::GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] 99.92::1-87 PF01008::IF-2B 99.88::1-75 GO:0005829::cytosol confident hh_3ecs_A_1::1-87 very confident psy2575 165 O28242::Putative translation initiation factor eIF-2B subunit 2 ::Catalyzes the exchange of initiation factor 2-bound GDP for GTP.::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) portable COG1184::GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis] 100.00::34-161 PF01008::IF-2B 100.00::34-161 GO:0043234::protein complex confident hh_3ecs_A_1::35-161 very confident psy11065 138 Q96AE4::Far upstream element-binding protein 1 ::Regulates MYC expression by binding to a single-stranded far-upstream element (FUSE) upstream of the MYC promoter. May act both as activator and repressor of transcription.::Homo sapiens (taxid: 9606) portable COG1185::Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] 98.64::4-123 PF00013::KH_1 99.51::46-109 GO:0005730::nucleolus confident hh_1j4w_A_1::4-113 very confident psy2768 96 Q5SF07::Insulin-like growth factor 2 mRNA-binding protein 2 ::Binds to the 5'-UTR of the insulin-like growth factor 2 (IGF2) mRNAs. Binding is isoform-specific. May regulate translation of target mRNAs.::Mus musculus (taxid: 10090) portable COG1185::Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] 99.00::2-95 PF00013::KH_1 99.69::25-86 GO:0071013::catalytic step 2 spliceosome confident hh_3krm_A_1::2-93 very confident psy3754 755 A4G647::Polyribonucleotide nucleotidyltransferase ::Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction.::Herminiimonas arsenicoxydans (taxid: 204773) very confident COG1185::Pnp Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) [Translation, ribosomal structure and biogenesis] 100.00::64-755 PF01138::RNase_PH 99.90::387-520 GO:0035438::cyclic-di-GMP binding very confident hh_4aid_A_1::46-54,63-299,301-755 very confident psy9364 156 P15180::Lysine--tRNA ligase, cytoplasmic ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1190::LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] 100.00::2-156 PF00152::tRNA-synt_2 99.83::30-155 GO:0000049::tRNA binding confident hh_3bju_A_1::2-24,26-155 very confident psy8863 442 C5CSG3::Lysine--tRNA ligase ::::Variovorax paradoxus (strain S110) (taxid: 543728) very confident COG1190::LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] 100.00::1-442 PF00152::tRNA-synt_2 100.00::92-439 GO:0005829::cytosol very confident hh_4ex5_A_1::1-18,24-296,298-340,342-389,391-441 very confident psy15209 442 C5CSG3::Lysine--tRNA ligase ::::Variovorax paradoxus (strain S110) (taxid: 543728) very confident COG1190::LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] 100.00::1-442 PF00152::tRNA-synt_2 100.00::92-439 GO:0005829::cytosol very confident hh_4ex5_A_1::1-18,24-296,298-340,342-389,391-441 very confident psy11418 553 Q99MN1::Lysine--tRNA ligase ::Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction: the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA.::Mus musculus (taxid: 10090) confident COG1190::LysU Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] 100.00::38-328 PF00152::tRNA-synt_2 100.00::189-332 GO:0005875::microtubule associated complex confident hh_3bju_A_1::38-329 very confident psy14655 261 Q9CWD8::Iron-sulfur protein NUBPL ::Required for the assembly of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I). May deliver of one or more Fe-S clusters to complex I subunits.::Mus musculus (taxid: 10090) confident COG1192::Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] 99.97::1-248 PF06564::YhjQ 99.97::1-257 GO:0005829::cytosol confident hh_2ph1_A_1::1-26,29-193,204-211,213-215,224-239 very confident psy8564 341 P57617::A/G-specific adenine glycosylase ::Adenine glycosylase active on G-A and C-A mispairs.::Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (taxid: 107806) confident COG1194::MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair] 100.00::1-339 PF14815::NUDIX_4 99.89::213-336 GO:0006281::DNA repair confident hh_3fsp_A_1::1-246,248-249,261-307,310-340 very confident psy8565 341 P57617::A/G-specific adenine glycosylase ::Adenine glycosylase active on G-A and C-A mispairs.::Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (taxid: 107806) confident COG1194::MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair] 100.00::1-339 PF14815::NUDIX_4 99.89::213-336 GO:0006281::DNA repair confident hh_3fsp_A_1::1-246,248-249,261-307,310-340 very confident psy9547 363 Q05869::A/G-specific adenine glycosylase ::Adenine glycosylase active on G-A and C-A mispairs.::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) confident COG1194::MutY A/G-specific DNA glycosylase [DNA replication, recombination, and repair] 100.00::7-356 PF14815::NUDIX_4 99.89::241-353 GO:0006281::DNA repair confident hh_3n5n_X_1::6-234 very confident psy2547 1807 P02469::Laminin subunit beta-1 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Mus musculus (taxid: 10090) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.67::1759-1794 PF00055::Laminin_N 100.00::40-276 GO:0016477::cell migration confident hh_4aqs_A_1::26-90,94-110,112-222,225-506,508-546 very confident psy5037 224 Q6P5D4::Centrosomal protein of 135 kDa ::Centrosomal protein involved in centriole biogenesis. Acts as a scaffolding protein during early centriole biogenesis. Also required for centriole-centriole cohesion during interphase by acting as a platform protein for CEP250 at the centriole.::Mus musculus (taxid: 10090) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 98.93::104-219 PF00261::Tropomyosin 98.95::16-220 GO:0000142::cellular bud neck contractile ring confident hh_1c1g_A_1::149-216 confident psy4658 182 P05661::Myosin heavy chain, muscle ::Muscle contraction.::Drosophila melanogaster (taxid: 7227) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 96.33::113-175 PF00261::Tropomyosin 97.87::25-180 GO:0030898::actin-dependent ATPase activity confident hh_1i84_S_1::7-21,25-179 very confident psy1411 270 P09491::Tropomyosin-2 ::Tropomyosin, in association with the troponin complex, plays a central role in the calcium dependent regulation of muscle contraction. May also regulate motor systems required to maintain nuclear integrity and apico-basal polarity during embryogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.30::6-215 PF00261::Tropomyosin 99.93::39-270 GO:0031941::filamentous actin very confident hh_2efr_A_1::127-137,141-153,158-270 very confident psy4474 2174 Q6ZWR6::Nesprin-1 ::Multi-isomeric modular protein which forms a linking network between organelles and the actin cytoskeleton to maintain the subcellular spatial organization. Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments. Involved in the maintenance of nuclear organization and structural integrity. Connects nuclei to the cytoskeleton by interacting with the nuclear envelope and with F-actin in the cytoplasm (By similarity). Required for centrosome migration to the apical cell surface during early ciliogenesis.::Mus musculus (taxid: 10090) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 92.05::1452-1508 PF00435::Spectrin 98.84::1375-1480 GO:0043234::protein complex confident hh_3kbt_A_2::243-264,266-343,345-368,370-449,451-473,475-552 confident psy10988 1857 Q15643::Thyroid receptor-interacting protein 11 ::Binds the ligand binding domain of the thyroid receptor (THRB) in the presence of triiodothyronine and enhances THRB-modulated transcription. Golgi auto-antigen; probably involved in maintaining cis-Golgi structure.::Homo sapiens (taxid: 9606) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.93::88-638 PF01576::Myosin_tail_1 100.00::812-1729 GO:0005635::nuclear envelope confident hh_1i84_S_1::592-698,700-734,741-750,752-819,821-832 very confident psy12517 1286 Q6NZL0::Protein SOGA3 ::::Mus musculus (taxid: 10090) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.86::725-988 PF01576::Myosin_tail_1 100.00::246-834 GO:0005768::endosome confident hh_2dfs_A_2::398-413,417-440 confident psy8739 558 P05661::Myosin heavy chain, muscle ::Muscle contraction.::Drosophila melanogaster (taxid: 7227) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.10::514-557 PF01576::Myosin_tail_1 99.97::2-492 GO:0050896::response to stimulus confident rp_1i84_S_2::191-298,300-514 confident psy4651 721 P05661::Myosin heavy chain, muscle ::Muscle contraction.::Drosophila melanogaster (taxid: 7227) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.72::507-707 PF01576::Myosin_tail_1 100.00::12-616 GO:0050896::response to stimulus confident hh_1i84_S_1::359-492 confident psy17852 200 Q27991::Myosin-10 ::Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping. Involved with LARP6 in the stabilization of type I collagen mRNAs for CO1A1 and CO1A2.::Bos taurus (taxid: 9913) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 95.75::122-194 PF01576::Myosin_tail_1 99.78::2-195 GO:0050896::response to stimulus confident hh_1i84_S_2::118-120,122-192 confident psy16513 156 Q9TV62::Myosin-4 ::Muscle contraction.::Sus scrofa (taxid: 9823) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 95.37::111-141 PF01576::Myosin_tail_1 99.83::1-105 GO:0050896::response to stimulus confident hh_2dfs_A_2::53-77,79-79,83-105 confident psy12760 199 Q20060::Structural maintenance of chromosomes protein 4 ::Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. Also involved in chromosome segregation.::Caenorhabditis elegans (taxid: 6239) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.95::59-194 PF02463::SMC_N 97.06::171-194 GO:0000228::nuclear chromosome confident hh_1w1w_A_1::78-192 very confident psy834 926 Q28298::Ribosome-binding protein 1 ::Acts as a ribosome receptor and mediates interaction between the ribosome and the endoplasmic reticulum membrane.::Canis familiaris (taxid: 9615) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 100.00::379-669 PF02463::SMC_N 99.41::534-667 GO:0016021::integral to membrane confident hh_1w1w_A_1::397-468,490-491,499-507,509-557,563-568,579-585,610-612,615-619,627-667 very confident psy16785 1642 no hit no match COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 95.32::1107-1133 PF04012::PspA_IM30 95.17::29-158 GO:0005819::spindle confident hh_1i84_S_2::99-158 portable psy13761 402 O75410::Transforming acidic coiled-coil-containing protein 1 ::Likely involved in the processes that promote cell division prior to the formation of differentiated tissues.::Homo sapiens (taxid: 9606) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 96.57::350-395 PF05010::TACC 100.00::215-396 GO:0045111::intermediate filament cytoskeleton confident hh_2dfs_A_1::263-285,290-345 confident psy11659 684 Q5TZ80::Protein Hook homolog 1 ::May function to promote vesicle trafficking and/or fusion.::Danio rerio (taxid: 7955) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.12::500-590 PF05622::HOOK 100.00::4-683 GO:0030897::HOPS complex very confident hh_1wix_A_1::3-66,68-162 very confident psy3622 964 Q9P219::Protein Daple ::Negative regulator of the canonical Wnt signaling pathway, acting downstream of DVL to inhibit CTNNB1/Beta-catenin stabilization.::Homo sapiens (taxid: 9606) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.63::208-290 PF05622::HOOK 100.00::13-305 GO:0043229::intracellular organelle confident hh_1wix_A_1::13-28,30-108,113-162 very confident psy14063 531 Q8CG47::Structural maintenance of chromosomes protein 4 ::Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.::Mus musculus (taxid: 10090) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 100.00::5-456 PF06470::SMC_hinge 99.82::244-360 GO:0005737::cytoplasm confident hh_3l51_B_1::229-313,315-362 very confident psy444 495 no hit no match COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 95.95::234-384 PF07888::CALCOCO1 94.93::192-456 GO:0031672::A band confident hh_1i84_S_2::349-357 confident psy8072 584 Q9VRP9::E3 ubiquitin-protein ligase Bre1 ::E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-117' of histone H2B. H2B 'Lys-117' ubiquitination gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation. It thereby plays a central role in histone code and gene regulation. Required for the expression of Notch target genes in development by affecting the levels of Su(H) in imaginal disk cells and stimulating the Su(H)-mediated transcription of Notch-specific genes.::Drosophila melanogaster (taxid: 7227) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 97.88::236-288 PF07888::CALCOCO1 98.33::422-549 GO:0043234::protein complex confident hh_2dfs_A_2::467-488 confident psy5601 270 Q9NSB8::Homer protein homolog 2 ::Postsynaptic density scaffolding protein. Binds and cross-links cytoplasmic regions of GRM1, GRM5, ITPR1, DNM3, RYR1, RYR2, SHANK1 and SHANK3. By physically linking GRM1 and GRM5 with ER-associated ITPR1 receptors, it aids the coupling of surface receptors to intracellular calcium release. May also couple GRM1 to PI3 kinase through its interaction with AGAP2. Isoforms can be differently regulated and may play an important role in maintaining the plasticity at glutamatergic synapses.::Homo sapiens (taxid: 9606) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 98.46::218-264 PF07888::CALCOCO1 98.55::62-267 GO:0050896::response to stimulus confident hh_3cvf_A_1::196-269 confident psy825 565 P40222::Alpha-taxilin ::May be involved in intracellular vesicle traffic and potentially in calcium-dependent exocytosis in neuroendocrine cells.::Homo sapiens (taxid: 9606) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 97.96::425-534 PF09728::Taxilin 100.00::255-522 GO:0005737::cytoplasm confident hh_1i84_S_2::455-483 confident psy10418 389 O76878::RILP-like protein homolog ::::Drosophila melanogaster (taxid: 7227) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 95.51::7-78 PF09744::Jnk-SapK_ap_N 100.00::14-152 GO:0005829::cytosol confident hh_1i84_S_2::101-109 confident psy15959 393 Q16204::Coiled-coil domain-containing protein 6 ::::Homo sapiens (taxid: 9606) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 98.15::28-207 PF09755::DUF2046 100.00::2-310 GO:0005737::cytoplasm confident hh_1i84_S_2::31-62 confident psy8596 237 no hit no match COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.39::7-160 PF10174::Cast 99.28::2-228 GO:0048788::presynaptic cytoskeletal matrix assembled at active zones confident hh_1i84_S_2::189-229 confident psy10214 415 Q9VBQ9::Mediator of RNA polymerase II transcription subunit 28 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Drosophila melanogaster (taxid: 7227) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 91.96::218-226 PF11594::Med28 99.94::74-157 GO:0043232::intracellular non-membrane-bounded organelle confident hh_1deq_A_1::213-251 confident psy7816 2905 Q6ZWR6::Nesprin-1 ::Multi-isomeric modular protein which forms a linking network between organelles and the actin cytoskeleton to maintain the subcellular spatial organization. Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments. Involved in the maintenance of nuclear organization and structural integrity. Connects nuclei to the cytoskeleton by interacting with the nuclear envelope and with F-actin in the cytoplasm (By similarity). Required for centrosome migration to the apical cell surface during early ciliogenesis.::Mus musculus (taxid: 10090) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 96.33::2306-2355 PF12128::DUF3584 98.79::2195-2335 GO:0044430::cytoskeletal part confident hh_3kbt_A_2::2436-2502,2504-2538,2540-2641,2643-2663,2666-2676,2711-2782 confident psy15551 640 P13496::Dynactin subunit 1 ::Required for the cytoplasmic dynein-driven retrograde movement of vesicles and organelles along microtubules. Dynein-dynactin interaction is a key component of the mechanism of axonal transport of vesicles and organelles.::Drosophila melanogaster (taxid: 7227) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.39::578-630 PF12455::Dynactin 99.93::461-640 GO:0044464::cell part confident hh_2dfs_A_2::378-418,423-451 confident psy16118 1070 Q9Z1M9::Structural maintenance of chromosomes protein 1A ::Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis. Involved in DNA repair via its interaction with BRCA1 and its related phosphorylation by ATM, or via its phosphorylation by ATR. Works as a downstream effector both in the ATM/NBS1 branch and in the ATR/MSH2 branch of S-phase checkpoint.::Rattus norvegicus (taxid: 10116) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 100.00::39-1067 PF13514::AAA_27 99.84::998-1052 GO:0000785::chromatin confident hh_2wd5_A_1::450-535,539-584,587-637 very confident psy9513 1491 Q9W252::DNA repair protein RAD50 ::Essential component of the MRN complex, a complex that possesses single-stranded DNA endonuclease and 3' to 5' exonuclease activities, and plays a central role in double-strand break (DSB) repair. The complex participates in processes such as DNA recombination, DNA repair, genome stability, telomere integrity and meiosis. The MRN complex may protect telomeres by facilitating recruitment of HOAP and HP1 at chromosome ends. In the complex, it mediates the ATP-binding and is probably required to bind DNA ends and hold them in close proximity.::Drosophila melanogaster (taxid: 7227) confident COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 100.00::2-1321 PF13514::AAA_27 99.98::1122-1297 GO:0030674::protein binding, bridging confident hh_3qf7_A_1::2-16,20-65,71-71,92-106,108-122,125-128,134-141,143-153,156-215 very confident psy11582 1760 Q8CJ40::Rootletin ::Major structural component of the ciliary rootlet, a cytoskeletal-like structure in ciliated cells which originates from the basal body at the proximal end of a cilium and extends proximally toward the cell nucleus. Contributes to centrosome cohesion before mitosis.::Mus musculus (taxid: 10090) portable COG1196::Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] 99.81::392-641 PF15035::Rootletin 100.00::54-251 GO:0031090::organelle membrane confident hh_1c1g_A_1::395-435 confident psy3462 795 Q9V597::60S ribosomal protein L31 ::::Drosophila melanogaster (taxid: 7227) confident COG1199::DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] 99.95::533-679 PF01198::Ribosomal_L31e 99.93::121-195 GO:0022625::cytosolic large ribosomal subunit confident hh_2zkr_x_1::114-194 very confident psy14273 115 A2QY22::ATP-dependent RNA helicase chl1 ::Important for chromosome transmission and normal cell cycle progression in G(2)/M. May have a role in changing DNA topology to allow the loading of proteins involved in maintaining sister chromatid cohesion in the vicinity of the centromeres. Has a specific role in chromosome segregation during meiosis II.::Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) confident COG1199::DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] 99.45::23-81 PF04851::ResIII 98.78::29-75 GO:0000790::nuclear chromatin confident hh_4a15_A_1::29-81 confident psy14272 194 A8MPP1::Putative ATP-dependent RNA helicase DDX11-like protein 8 ::Putative DNA helicase.::Homo sapiens (taxid: 9606) portable COG1199::DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] 99.37::25-82 PF04851::ResIII 98.52::29-75 GO:0044424::intracellular part confident hh_4a15_A_1::29-80 confident psy876 179 Q7QEI1::Regulator of telomere elongation helicase 1 homolog ::ATP-dependent DNA helicase required to suppress inappropriate homologous recombination, thereby playing a central role DNA repair and in the maintenance of genomic stability. Antagonizes homologous recombination by promoting the disassembly of D loop recombination intermediates.::Anopheles gambiae (taxid: 7165) portable COG1199::DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] 97.24::84-125 PF06733::DEAD_2 96.75::1-44 GO:0005737::cytoplasm confident hh_4a15_A_1::82-97,99-100,102-126,128-146 confident psy11433 941 P18074::TFIIH basal transcription factor complex helicase XPD subunit ::ATP-dependent 5'-3' DNA helicase, component of the core-TFIIH basal transcription factor. Involved in nucleotide excision repair (NER) of DNA by opening DNA around the damage, and in RNA transcription by RNA polymerase II by anchoring the CDK-activating kinase (CAK) complex, composed of CDK7, cyclin H and MAT1, to the core-TFIIH complex. Involved in the regulation of vitamin-D receptor activity. As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation. Might have a role in aging process and could play a causative role in the generation of skin cancers.::Homo sapiens (taxid: 9606) confident COG1199::DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] 99.97::62-147 PF06777::DUF1227 99.96::150-337 GO:0009411::response to UV confident hh_3crv_A_1::34-45,53-104,106-121,123-146 very confident psy877 136 Q7QEI1::Regulator of telomere elongation helicase 1 homolog ::ATP-dependent DNA helicase required to suppress inappropriate homologous recombination, thereby playing a central role DNA repair and in the maintenance of genomic stability. Antagonizes homologous recombination by promoting the disassembly of D loop recombination intermediates.::Anopheles gambiae (taxid: 7165) portable COG1199::DinG Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair] 99.88::2-134 PF13307::Helicase_C_2 99.97::2-135 GO:0043234::protein complex confident hh_4a15_A_1::2-32,39-40,43-44,48-63,68-68,81-117,119-133 very confident psy3103 217 Q54G57::Activating signal cointegrator 1 complex subunit 3 ::::Dictyostelium discoideum (taxid: 44689) portable COG1204::Superfamily II helicase [General function prediction only] 99.89::39-201 PF00270::DEAD 97.99::35-103 GO:0005681::spliceosomal complex confident hh_2va8_A_1::36-54,56-81,92-115,122-149,153-211 very confident psy2029 138 Q2VPA6::Helicase POLQ-like ::DNA-dependent ATPase and 5' to 3' DNA helicase.::Mus musculus (taxid: 10090) portable COG1204::Superfamily II helicase [General function prediction only] 99.59::57-138 PF00270::DEAD 99.37::62-136 GO:0005730::nucleolus confident hh_2p6r_A_1::45-101,103-124,126-137 very confident psy15878 693 Q2VPA6::Helicase POLQ-like ::DNA-dependent ATPase and 5' to 3' DNA helicase.::Mus musculus (taxid: 10090) confident COG1204::Superfamily II helicase [General function prediction only] 100.00::1-664 PF00271::Helicase_C 99.53::240-314 GO:0017116::single-stranded DNA-dependent ATP-dependent DNA helicase activity confident hh_2p6r_A_1::1-12,14-31,35-56,59-150,153-156,165-205,211-214,218-328,330-384,391-416,420-453,456-471,473-474,481-497,501-508,519-581,584-585,589-637,639-645,649-661,663-674 very confident psy14582 1689 A6UN73::Putative ski2-type helicase ::::Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) (taxid: 406327) portable COG1204::Superfamily II helicase [General function prediction only] 100.00::468-1467 PF02889::Sec63 100.00::1216-1672 GO:0004004::ATP-dependent RNA helicase activity confident hh_4f92_B_1::405-562,588-595,615-616,639-648,662-669,678-679,681-687,762-771,809-1009,1045-1673 very confident psy13788 1034 E1BNG3::Activating signal cointegrator 1 complex subunit 3 ::3'-5' DNA helicase involved in repair of alkylated DNA. Promotes DNA unwinding to generate single-stranded substrate needed for ALKHB3, enabling ALKHB3 to process alkylated N3-methylcytosine (3mC) within double-stranded regions. Enhances NF-kappa-B, SRF and AP1 transactivation.::Bos taurus (taxid: 9913) confident COG1204::Superfamily II helicase [General function prediction only] 100.00::2-612 PF02889::Sec63 100.00::340-659 GO:0043140::ATP-dependent 3'-5' DNA helicase activity confident hh_3im1_A_1::335-402,404-434,436-466,468-492,503-615,620-630,633-659 very confident psy9269 148 Q54G57::Activating signal cointegrator 1 complex subunit 3 ::::Dictyostelium discoideum (taxid: 44689) portable COG1204::Superfamily II helicase [General function prediction only] 99.42::9-146 no hit no match GO:0005681::spliceosomal complex confident hh_4f92_B_1::1-63,65-76,81-147 very confident psy9164 380 Q295Y7::Mannose-1-phosphate guanyltransferase beta ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG1207::GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] 100.00::1-379 PF00483::NTP_transferase 99.95::1-201 GO:0051286::cell tip confident hh_1hm9_A_1::1-34,40-41,44-265,267-289,295-344,346-363,369-380 very confident psy17795 523 Q0VFM6::Mannose-1-phosphate guanyltransferase alpha ::::Xenopus tropicalis (taxid: 8364) confident COG1208::GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] 100.00::93-500 PF00483::NTP_transferase 100.00::95-367 GO:0005829::cytosol confident hh_2ggo_A_1::94-102,105-139,141-152,156-164,167-167,170-181,199-204,206-209,212-214,216-231,234-234,237-247,250-262,264-307,325-326,328-334,336-457 very confident psy1482 627 Q64350::Translation initiation factor eIF-2B subunit epsilon ::Catalyzes the exchange of eukaryotic initiation factor 2-bound GDP for GTP.::Rattus norvegicus (taxid: 10116) confident COG1208::GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] 100.00::17-363 PF00483::NTP_transferase 99.97::19-284 GO:0044444::cytoplasmic part confident hh_3jui_A_1::463-627 very confident psy9166 77 P0C5I2::Mannose-1-phosphate guanyltransferase beta ::::Sus scrofa (taxid: 9823) confident COG1208::GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] 99.79::10-76 PF00483::NTP_transferase 99.77::12-76 GO:0051286::cell tip confident hh_2ggo_A_1::11-66 very confident psy10879 245 Q91Z92::Beta-1,3-galactosyltransferase 6 ::Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-linked galactose residue. Has a preference for galactose-beta-1,4-xylose that is found in the linker region of glycosaminoglycans, such as heparan sulfate and chondroitin sulfate. Has no activity towards substrates with terminal glucosamine or galactosamine residues.::Mus musculus (taxid: 10090) confident COG1215::Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 93.83::20-221 PF01762::Galactosyl_T 100.00::34-219 GO:0006024::glycosaminoglycan biosynthetic process confident hh_2j0a_A_1::19-49,53-66,71-72,75-80,82-104,107-136,138-148,150-154,156-238 confident psy10876 319 Q91Z92::Beta-1,3-galactosyltransferase 6 ::Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-linked galactose residue. Has a preference for galactose-beta-1,4-xylose that is found in the linker region of glycosaminoglycans, such as heparan sulfate and chondroitin sulfate. Has no activity towards substrates with terminal glucosamine or galactosamine residues.::Mus musculus (taxid: 10090) confident COG1215::Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 95.59::50-252 PF01762::Galactosyl_T 100.00::65-250 GO:0006024::glycosaminoglycan biosynthetic process confident hh_2j0a_A_1::48-78,80-81,84-84,86-95,99-103,106-111,113-136,138-166,168-179,181-185,187-200,202-257 confident psy11718 65 O01346::Beta-1,4-mannosyltransferase egh ::Glycosyltransferase with a proposed role in glycosphingolipid biosynthesis. Neurogenic protein implicated in epithelial development. Critical component of a differential oocyte-follicle cell adhesive system.::Drosophila melanogaster (taxid: 7227) confident COG1215::Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 99.66::2-65 PF13632::Glyco_trans_2_3 99.66::2-64 GO:0019187::beta-1,4-mannosyltransferase activity confident hh_4hg6_A_1::3-13,17-64 confident psy7267 569 no hit no match COG1215::Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 99.93::89-354 PF13641::Glyco_tranf_2_3 99.91::90-347 GO:0005783::endoplasmic reticulum confident hh_2ffu_A_1::87-115,122-145,149-152,155-208,223-283,286-317 confident psy11373 539 O88693::Ceramide glucosyltransferase ::Catalyzes the first glycosylation step in glycosphingolipid biosynthesis, the transfer of glucose to ceramide. May also serve as a "flippase".::Mus musculus (taxid: 10090) portable COG1215::Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 100.00::69-403 PF13641::Glyco_tranf_2_3 100.00::70-403 GO:0005789::endoplasmic reticulum membrane confident hh_2z86_A_1::67-127,130-133,135-139,143-201,209-209,260-264,288-289,318-320,326-356,358-372,374-405 confident psy11724 355 O01346::Beta-1,4-mannosyltransferase egh ::Glycosyltransferase with a proposed role in glycosphingolipid biosynthesis. Neurogenic protein implicated in epithelial development. Critical component of a differential oocyte-follicle cell adhesive system.::Drosophila melanogaster (taxid: 7227) confident COG1215::Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 98.45::139-328 PF13641::Glyco_tranf_2_3 98.94::140-345 GO:0019187::beta-1,4-mannosyltransferase activity confident hh_3l7i_A_1::141-151,153-167,172-195,198-201,205-205,208-221,227-254 portable psy3378 239 Q10473::Polypeptide N-acetylgalactosaminyltransferase 1 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7.::Rattus norvegicus (taxid: 10116) confident COG1215::Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] 97.01::190-236 no hit no match GO:0004653::polypeptide N-acetylgalactosaminyltransferase activity confident hh_2d7i_A_1::120-140,145-145,148-182,184-237 very confident psy1766 214 Q921L8::Polypeptide N-acetylgalactosaminyltransferase 11 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays the same enzyme activity toward Muc1, Muc4.1, and EA2 than GALNT1. Does not appear to be involved in glycosylation of erythropoietin.::Mus musculus (taxid: 10090) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.84::13-143 PF00535::Glycos_transf_2 99.91::18-145 GO:0009312::oligosaccharide biosynthetic process confident rp_2ffu_A_1::5-62,64-72,79-171 very confident psy3380 290 Q6UE39::Polypeptide N-acetylgalactosaminyltransferase 13 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. May be responsible for the synthesis of Tn antigen in neuronal cells.::Rattus norvegicus (taxid: 10116) portable COG1216::Predicted glycosyltransferases [General function prediction only] 96.62::5-159 PF00652::Ricin_B_lectin 98.79::209-288 GO:0009312::oligosaccharide biosynthetic process confident hh_1xhb_A_1::2-43,51-125,127-127,150-226,229-288 very confident psy14347 316 Q9Y5Z6::Beta-1,3-galactosyltransferase 1 ::Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.::Homo sapiens (taxid: 9606) confident COG1216::Predicted glycosyltransferases [General function prediction only] 91.55::46-275 PF01762::Galactosyl_T 100.00::59-274 GO:0008378::galactosyltransferase activity confident hh_2j0a_A_1::45-73,76-76,81-89,91-94,99-101,104-133,136-162,188-206,210-224,226-295 confident psy16417 118 P34678::Polypeptide N-acetylgalactosaminyltransferase 3 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.::Caenorhabditis elegans (taxid: 6239) confident COG1216::Predicted glycosyltransferases [General function prediction only] 97.15::67-112 PF02709::Glyco_transf_7C 99.04::64-114 GO:0004653::polypeptide N-acetylgalactosaminyltransferase activity very confident hh_1xhb_A_1::3-114 very confident psy15856 118 O88419::Beta-1,4-galactosyltransferase 6 ::Required for the biosynthesis of glycosphingolipids.::Rattus norvegicus (taxid: 10116) portable COG1216::Predicted glycosyltransferases [General function prediction only] 98.40::27-87 PF02709::Glyco_transf_7C 99.94::9-86 GO:0005794::Golgi apparatus confident hh_3lw6_A_1::1-13,16-117 very confident psy13781 155 Q9Z2Y2::Beta-1,4-galactosyltransferase 2 ::Responsible for the synthesis of complex-type N-linked oligosaccharides in many glycoproteins as well as the carbohydrate moieties of glycolipids. Can produce lactose.::Mus musculus (taxid: 10090) portable COG1216::Predicted glycosyltransferases [General function prediction only] 96.24::47-95 PF02709::Glyco_transf_7C 99.86::30-106 GO:0009247::glycolipid biosynthetic process confident hh_3lw6_A_1::9-34,37-154 very confident psy6373 199 Q6WV19::Polypeptide N-acetylgalactosaminyltransferase 2 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident COG1216::Predicted glycosyltransferases [General function prediction only] 98.81::6-65 PF02709::Glyco_transf_7C 99.46::3-63 GO:0009312::oligosaccharide biosynthetic process confident no hit no match psy5324 131 Q6WV20::Polypeptide N-acetylgalactosaminyltransferase 1 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.19::1-60 PF02709::Glyco_transf_7C 99.52::2-57 GO:0009312::oligosaccharide biosynthetic process confident bp_1xhb_A_1::1-91 very confident psy7047 469 Q11068::Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ::Initiates complex N-linked carbohydrate formation. Essential for the conversion of high-mannose to hybrid and complex N-glycans.::Caenorhabditis elegans (taxid: 6239) confident COG1216::Predicted glycosyltransferases [General function prediction only] 97.95::97-238 PF03071::GNT-I 100.00::9-468 GO:0048471::perinuclear region of cytoplasm confident hh_1fo8_A_1::98-306,330-442,448-457,460-469 very confident psy736 304 P34678::Polypeptide N-acetylgalactosaminyltransferase 3 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.::Caenorhabditis elegans (taxid: 6239) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.97::9-235 PF10111::Glyco_tranf_2_2 99.96::14-233 GO:0009312::oligosaccharide biosynthetic process confident hh_2d7i_A_1::1-69,71-158,162-241,244-281 very confident psy8674 439 Q5RFJ6::N-acetylgalactosaminyltransferase 7 ::Glycopeptide transferase involved in O-linked oligosaccharide biosynthesis, which catalyzes the transfer of an N-acetyl-D-galactosamine residue to an already glycosylated peptide. In contrast to other proteins of the family, it does not act as a peptide transferase that transfers GalNAc onto serine or threonine residue on the protein receptor, but instead requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Some peptide transferase activity is however not excluded, considering that its appropriate peptide substrate may remain unidentified.::Pongo abelii (taxid: 9601) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.89::7-191 PF10111::Glyco_tranf_2_2 99.85::4-187 GO:0009312::oligosaccharide biosynthetic process confident rp_2ffu_A_2::8-92,96-188 very confident psy10463 605 Q6WV17::Polypeptide N-acetylgalactosaminyltransferase 5 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers EA2 as substrate.::Drosophila melanogaster (taxid: 7227) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.94::197-432 PF10111::Glyco_tranf_2_2 99.93::201-431 GO:0009312::oligosaccharide biosynthetic process confident hh_2d7i_A_1::48-85,87-122,231-257,259-356,360-439,442-468,470-531,537-547,549-560,562-578,583-604 very confident psy1765 867 Q921L8::Polypeptide N-acetylgalactosaminyltransferase 11 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays the same enzyme activity toward Muc1, Muc4.1, and EA2 than GALNT1. Does not appear to be involved in glycosylation of erythropoietin.::Mus musculus (taxid: 10090) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.94::51-350 PF13641::Glyco_tranf_2_3 99.93::52-346 GO:0004653::polypeptide N-acetylgalactosaminyltransferase activity confident hh_2ffu_A_1::4-98,168-175,178-358,428-429,451-519,545-552,555-563,565-595,597-622,624-626,671-671,676-692,695-708,710-721 very confident psy11642 372 Q8MV48::N-acetylgalactosaminyltransferase 7 ::Glycopeptide transferase involved in O-linked oligosaccharide biosynthesis, which catalyzes the transfer of an N-acetyl-D-galactosamine residue to an already glycosylated peptide. In contrast to other proteins of the family, it does not act as a peptide transferase that transfers GalNAc onto serine or threonine residue on the protein receptor, but instead requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Some peptide transferase activity is however not excluded, considering that its appropriate peptide substrate may remain unidentified. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.97::81-319 PF13641::Glyco_tranf_2_3 99.96::82-315 GO:0009312::oligosaccharide biosynthetic process confident hh_2d7i_A_1::20-38,41-141,143-218,221-243,246-324,331-348,350-372 very confident psy3650 435 Q9WU83::Dolichol-phosphate mannosyltransferase ::Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.::Cricetulus griseus (taxid: 10029) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.91::199-416 PF13641::Glyco_tranf_2_3 99.94::200-425 GO:0019348::dolichol metabolic process confident hh_2z86_A_1::7-31,33-33,36-224,228-259,262-266,268-340,344-344,349-350,352-352,355-396,398-408 very confident psy14856 734 O60568::Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ::Forms hydroxylysine residues in -Xaa-Lys-Gly- sequences in collagens. These hydroxylysines serve as sites of attachment for carbohydrate units and are essential for the stability of the intermolecular collagen cross-links.::Homo sapiens (taxid: 9606) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.61::290-515 PF13641::Glyco_tranf_2_3 99.61::291-509 GO:0055114::oxidation-reduction process confident hh_2ffu_A_1::289-338,342-342,347-374,378-392,394-470,472-473,476-512 confident psy18177 220 Q9UBV7::Beta-1,4-galactosyltransferase 7 ::Required for the biosynthesis of the tetrasaccharide linkage region of proteoglycans, especially for small proteoglycans in skin fibroblasts.::Homo sapiens (taxid: 9606) confident COG1216::Predicted glycosyltransferases [General function prediction only] 99.07::63-219 PF13733::Glyco_transf_7N 100.00::39-152 GO:0006024::glycosaminoglycan biosynthetic process confident hh_3lw6_A_1::33-123,126-220 very confident psy5933 406 P08037::Beta-1,4-galactosyltransferase 1 ::The cell surface form functions as a recognition molecule during a variety of cell to cell and cell to matrix interactions, as those occurring during development and egg fertilization, by binding to specific oligosaccharide ligands on opposing cells or in the extracellular matrix.::Bos taurus (taxid: 9913) portable COG1216::Predicted glycosyltransferases [General function prediction only] 98.44::132-288 PF13733::Glyco_transf_7N 100.00::88-221 GO:0009247::glycolipid biosynthetic process confident hh_3lw6_A_1::93-107,109-194,197-228,231-327,330-348 very confident psy1760 793 P0A3B1::GTP-binding protein TypA/BipA ::Not known; probably interacts with the ribosomes in a GTP dependent manner.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) confident COG1217::TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] 100.00::211-790 PF01509::TruB_N 100.00::31-179 GO:0009570::chloroplast stroma confident hh_3e3x_A_1::481-561,563-683,688-790 very confident psy1758 1527 B1XV89::Translation initiation factor IF-2 ::One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.::Polynucleobacter necessarius subsp. necessarius (strain STIR1) (taxid: 452638) confident COG1217::TypA Predicted membrane GTPase involved in stress response [Signal transduction mechanisms] 100.00::920-1525 PF01509::TruB_N 100.00::684-832 GO:0097216::guanosine tetraphosphate binding confident hh_3e3x_A_1::1193-1273,1275-1395,1400-1525 very confident psy5910 225 Q47FB7::ATP-dependent Clp protease ATP-binding subunit ClpX ::ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.::Dechloromonas aromatica (strain RCB) (taxid: 159087) confident COG1219::ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] 100.00::2-225 PF00004::AAA 99.85::43-198 GO:0004176::ATP-dependent peptidase activity confident bp_3hws_A_1::3-160,163-223 very confident psy11091 408 Q9JHS4::ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial ::ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of clpP.::Mus musculus (taxid: 10090) confident COG1219::ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] 100.00::4-242 PF07724::AAA_2 99.57::5-140 GO:0004176::ATP-dependent peptidase activity confident rp_1um8_A_1::20-36,38-82,107-241 very confident psy13428 67 A4XHW1::ATP-dependent Clp protease ATP-binding subunit ClpX ::ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.::Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) (taxid: 351627) confident COG1219::ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] 99.86::2-60 no hit no match GO:0004176::ATP-dependent peptidase activity confident hh_3hws_A_1::2-41 very confident psy2392 1165 Q0KF69::ATP-dependent protease ATPase subunit HslU ::ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.::Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) confident COG1220::HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] 100.00::171-610 PF07724::AAA_2 99.84::419-500 GO:0005829::cytosol confident hh_1g41_A_1::171-314,319-437,439-610 very confident psy2406 464 Q0KF69::ATP-dependent protease ATPase subunit HslU ::ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.::Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) very confident COG1220::HslU ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones] 100.00::29-464 PF07724::AAA_2 99.91::272-353 GO:0016020::membrane very confident hh_1ofh_A_1::28-59,64-128,205-207,267-290,292-464 very confident psy15623 133 Q9WV86::Katanin p60 ATPase-containing subunit A1 ::Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays, such as that seen during disassembly of interphase microtubules at the G2-M transition. May also be required for microtubule release from the centrosome after nucleation. In mitotic spindles this could allow depolymerization of the microtubule end proximal to the centrosome, and subsequent poleward microtubule flux. In neurons, microtubule release within the cell body allows their subsequent transport into neuronal processes by microtubule dependent motor proteins. This transport is required for axonal growth.::Mus musculus (taxid: 10090) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.97::3-123 PF00004::AAA 98.20::2-52 GO:0000785::chromatin confident hh_2qp9_X_1::2-15,21-124 very confident psy522 131 P62191::26S protease regulatory subunit 4 ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Homo sapiens (taxid: 9606) very confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::1-131 PF00004::AAA 99.54::1-86 GO:0004175::endopeptidase activity very confident hh_4b4t_I_1::1-131 very confident psy16204 577 B7NZ88::Katanin p60 ATPase-containing subunit A-like 1 ::Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth.::Oryctolagus cuniculus (taxid: 9986) portable COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::210-557 PF00004::AAA 99.82::250-486 GO:0005634::nucleus confident hh_2qp9_X_1::210-301,411-434,436-456,460-576 very confident psy11689 390 O60058::ATPase family gene 2 protein ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::139-379 PF00004::AAA 99.53::181-253 GO:0005634::nucleus confident hh_2qp9_X_1::125-135,145-172,174-266,271-335,338-355 very confident psy6098 378 O18413::26S protease regulatory subunit 8 ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Drosophila melanogaster (taxid: 7227) very confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::108-377 PF00004::AAA 99.61::5-79 GO:0005635::nuclear envelope confident hh_3h4m_A_1::202-300,330-375 very confident psy11254 741 Q2KIW6::26S protease regulatory subunit 10B ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Bos taurus (taxid: 9913) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::12-453 PF00004::AAA 99.85::527-660 GO:0005730::nucleolus very confident hh_4b4t_L_2::501-732 very confident psy4165 242 Q925I1::ATPase family AAA domain-containing protein 3 ::::Mus musculus (taxid: 10090) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::1-207 PF00004::AAA 99.75::2-116 GO:0005743::mitochondrial inner membrane confident hh_2qp9_X_1::1-44,46-65,67-136,147-148,153-184 very confident psy3868 69 P55072::Transitional endoplasmic reticulum ATPase ::Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. Regulates E3 ubiquitin-protein ligase activity of RNF19A (By similarity). Component of the VCP/p97-AMFR/gp78 complex that participates in the final step of the sterol-mediated ubiquitination and endoplasmic reticulum-associated degradation (ERAD) of HMGCR.::Homo sapiens (taxid: 9606) very confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.87::3-68 PF00004::AAA 99.49::3-64 GO:0005794::Golgi apparatus very confident bp_3hu3_A_1::14-66 very confident psy3632 121 P18708::Vesicle-fusing ATPase ::Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seem to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin. Interaction with AMPAR subunit GRIA2 leads to influence GRIA2 membrane cycling.::Cricetulus griseus (taxid: 10029) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.97::9-117 PF00004::AAA 99.36::57-114 GO:0005795::Golgi stack confident hh_2qp9_X_1::11-17,20-31,33-48,50-84,86-115 very confident psy3374 72 P46463::Peroxisome biosynthesis protein PAS1 ::Involved in peroxisome biosynthesis. May play a direct or indirect role in delivering membrane material to developing peroxisomes. It may also be involved in intracellular membrane movement.::Pichia pastoris (taxid: 4922) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.86::10-71 PF00004::AAA 98.99::11-65 GO:0005829::cytosol confident hh_1iy2_A_1::13-71 very confident psy5642 237 P46468::Putative cell division cycle ATPase ::::Plasmodium falciparum (isolate 3D7) (taxid: 36329) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::3-221 PF00004::AAA 99.65::7-119 GO:0005829::cytosol confident hh_2x8a_A_1::7-62,67-158,186-228 very confident psy6770 362 Q3T030::26S protease regulatory subunit 6B ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Bos taurus (taxid: 9913) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::1-328 PF00004::AAA 99.72::1-123 GO:0005829::cytosol confident hh_4b4t_K_1::1-72,204-327 very confident psy13773 299 Q7KN62::Transitional endoplasmic reticulum ATPase TER94 ::Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process (By similarity). Involved in the ubiquitin-proteasome system. Important for oskar mRNA localization and/or anchoring during oogenesis.::Drosophila melanogaster (taxid: 7227) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.97::1-204 PF00004::AAA 98.87::24-78 GO:0005829::cytosol confident hh_3cf0_A_1::2-168,170-174,178-179,181-222 very confident psy3997 256 Q8H1F9::Pachytene checkpoint protein 2 homolog ::Plays a key role in chromosome recombination during meiosis.::Arabidopsis thaliana (taxid: 3702) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::3-248 PF00004::AAA 99.85::19-185 GO:0005829::cytosol confident hh_2qp9_X_1::13-42,52-83,89-108,113-135,144-150,162-187,198-230,243-248 very confident psy7780 317 no hit no match COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::1-316 PF00004::AAA 99.90::83-232 GO:0005829::cytosol confident hh_2ce7_A_1::82-180,200-305 very confident psy15151 431 O88685::26S protease regulatory subunit 6A ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Mus musculus (taxid: 10090) very confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::34-424 PF00004::AAA 99.87::215-348 GO:0008540::proteasome regulatory particle, base subcomplex very confident hh_1iy2_A_1::170-196,198-416 very confident psy5205 113 P54813::ATP-dependent zinc metalloprotease YME1 homolog ::Putative ATP-dependent protease.::Caenorhabditis elegans (taxid: 6239) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.98::4-113 PF00004::AAA 98.90::50-113 GO:0009535::chloroplast thylakoid membrane confident hh_2ce7_A_1::2-113 very confident psy15936 665 O18413::26S protease regulatory subunit 8 ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Drosophila melanogaster (taxid: 7227) very confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::140-654 PF00004::AAA 99.73::416-578 GO:0016887::ATPase activity confident hh_2ce7_A_1::373-397,399-519,549-652 very confident psy13774 110 P55072::Transitional endoplasmic reticulum ATPase ::Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. Regulates E3 ubiquitin-protein ligase activity of RNF19A (By similarity). Component of the VCP/p97-AMFR/gp78 complex that participates in the final step of the sterol-mediated ubiquitination and endoplasmic reticulum-associated degradation (ERAD) of HMGCR.::Homo sapiens (taxid: 9606) very confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::2-107 PF00004::AAA 99.69::2-91 GO:0016887::ATPase activity very confident rp_3cf0_A_1::10-94 very confident psy3540 202 B7NZ88::Katanin p60 ATPase-containing subunit A-like 1 ::Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth.::Oryctolagus cuniculus (taxid: 9986) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::2-182 PF00004::AAA 99.53::2-92 GO:0031090::organelle membrane confident hh_2qp9_X_1::2-33,35-57,61-201 very confident psy5521 570 Q9D3R6::Katanin p60 ATPase-containing subunit A-like 2 ::Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.::Mus musculus (taxid: 10090) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::219-453 PF00004::AAA 99.82::264-393 GO:0031090::organelle membrane confident hh_3b9p_A_1::220-223,225-413,418-462,533-570 very confident psy15087 341 B4F6J6::ATPase family AAA domain-containing protein 1 ::ATPase that plays a critical role in regulating the surface expression of AMPA receptors (AMPAR). Required for NMDA-stimulated AMPAR internalization in an ATPase-dependent manner.::Xenopus tropicalis (taxid: 8364) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::158-339 PF00004::AAA 99.90::203-333 GO:0031323::regulation of cellular metabolic process confident hh_2qp9_X_1::154-194,197-300,302-339 very confident psy5649 305 O60058::ATPase family gene 2 protein ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::3-222 PF00004::AAA 99.91::16-145 GO:0043234::protein complex confident hh_1xwi_A_1::10-133,136-200 very confident psy7809 343 P52917::Vacuolar protein sorting-associated protein 4 ::Involved in the transport of biosynthetic membrane proteins from the prevacuolar/endosomal compartment to the vacuole. Required for multivesicular body (MVB) protein sorting. Catalyzes the ATP-dependent dissociation of class E VPS proteins from endosomal membranes, such as the disassembly of the ESCRT-III complex.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::46-323 PF00004::AAA 99.86::92-218 GO:0045324::late endosome to vacuole transport confident hh_3vfd_A_1::25-188,190-275,292-292,302-342 very confident psy4538 343 P40328::Probable 26S protease subunit YTA6 ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::1-214 PF00004::AAA 99.88::1-131 GO:0051260::protein homooligomerization confident hh_2qp9_X_1::1-97,99-220 very confident psy16321 102 P62191::26S protease regulatory subunit 4 ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Homo sapiens (taxid: 9606) very confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.91::4-100 PF00005::ABC_tran 99.44::37-100 GO:0008540::proteasome regulatory particle, base subcomplex very confident rp_3h4m_A_1::12-92 very confident psy6523 713 Q5E9F9::26S protease regulatory subunit 7 ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Bos taurus (taxid: 9913) portable COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::90-616 PF00089::Trypsin 99.66::194-380 GO:0044464::cell part confident hh_2ce7_A_1::491-617 very confident psy7673 541 Q9SS94::Cell division control protein 48 homolog C ::Probably functions in cell division and growth processes. Interacts with certain SNAREs as part of specialized membrane fusion events where vesicles from the same organelle fuse (homotypic fusion).::Arabidopsis thaliana (taxid: 3702) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::2-243 PF01593::Amino_oxidase 99.87::299-532 GO:0005829::cytosol confident hh_3cf0_A_1::3-167,171-181,184-260 very confident psy11253 515 Q2KIW6::26S protease regulatory subunit 10B ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Bos taurus (taxid: 9913) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::34-163 PF02535::Zip 99.71::225-467 GO:0005737::cytoplasm confident hh_4b4t_L_1::34-161 very confident psy15622 217 Q9WV86::Katanin p60 ATPase-containing subunit A1 ::Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays, such as that seen during disassembly of interphase microtubules at the G2-M transition. May also be required for microtubule release from the centrosome after nucleation. In mitotic spindles this could allow depolymerization of the microtubule end proximal to the centrosome, and subsequent poleward microtubule flux. In neurons, microtubule release within the cell body allows their subsequent transport into neuronal processes by microtubule dependent motor proteins. This transport is required for axonal growth.::Mus musculus (taxid: 10090) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::10-196 PF05496::RuvB_N 99.63::12-151 GO:0000278::mitotic cell cycle confident hh_2qp9_X_1::2-216 very confident psy6716 371 B7NZ88::Katanin p60 ATPase-containing subunit A-like 1 ::Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Microtubule release from the mitotic spindle poles may allow depolymerization of the microtubule end proximal to the spindle pole, leading to poleward microtubule flux and poleward motion of chromosome. Microtubule release within the cell body of neurons may be required for their transport into neuronal processes by microtubule-dependent motor proteins. This transport is required for axonal growth.::Oryctolagus cuniculus (taxid: 9986) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::73-354 PF05496::RuvB_N 99.89::77-310 GO:0000785::chromatin confident hh_2qp9_X_1::70-213,219-271,284-371 very confident psy3808 330 P52917::Vacuolar protein sorting-associated protein 4 ::Involved in the transport of biosynthetic membrane proteins from the prevacuolar/endosomal compartment to the vacuole. Required for multivesicular body (MVB) protein sorting. Catalyzes the ATP-dependent dissociation of class E VPS proteins from endosomal membranes, such as the disassembly of the ESCRT-III complex.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::116-328 PF05496::RuvB_N 99.90::118-325 GO:0000815::ESCRT III complex confident hh_2qp9_X_1::103-182,184-226,228-329 very confident psy4924 105 E2R222::Pachytene checkpoint protein 2 homolog ::Plays a key role in chromosome recombination and chromosome structure development during meiosis. Required at early steps in meiotic recombination that leads to non-crossovers pathways. Also needed for efficient completion of homologous synapsis by influencing crossover distribution along the chromosomes affecting both crossovers and non-crossovers pathways. Also required for development of higher-order chromosome structures and is needed for synaptonemal-complex formation. In males, required for efficient synapsis of the sex chromosomes and for sex body formation. Promotes early steps of the DNA double-strand breaks (DSBs) repair process upstream of the assembly of RAD51 complexes. Required for depletion of HORMAD1 and HORMAD2 from synapsed chromosomes.::Canis familiaris (taxid: 9615) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.86::13-103 PF05496::RuvB_N 99.64::16-100 GO:0001673::male germ cell nucleus confident hh_2qp9_X_1::14-102 very confident psy6772 80 Q3T030::26S protease regulatory subunit 6B ::The 26S protease is involved in the ATP-dependent degradation of ubiquitinated proteins. The regulatory (or ATPase) complex confers ATP dependency and substrate specificity to the 26S complex.::Bos taurus (taxid: 9913) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.79::9-79 PF05496::RuvB_N 98.89::13-79 GO:0001673::male germ cell nucleus very confident hh_3h4m_A_1::10-78 very confident psy7782 225 no hit no match COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.94::2-91 PF05496::RuvB_N 98.77::1-64 GO:0004175::endopeptidase activity very confident hh_4b4t_I_1::73-91,93-225 very confident psy6208 197 P55072::Transitional endoplasmic reticulum ATPase ::Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. Regulates E3 ubiquitin-protein ligase activity of RNF19A (By similarity). Component of the VCP/p97-AMFR/gp78 complex that participates in the final step of the sterol-mediated ubiquitination and endoplasmic reticulum-associated degradation (ERAD) of HMGCR.::Homo sapiens (taxid: 9606) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.97::73-196 PF05496::RuvB_N 99.68::78-195 GO:0005794::Golgi apparatus very confident rp_3hu3_A_1::5-197 very confident psy2637 502 Q9QYY8::Spastin ::ATP-dependent microtubule severing protein. Microtubule severing may promote reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. Required for membrane traffic from the endoplasmic reticulum (ER) to the Golgi and for completion of the abscission stage of cytokinesis (By similarity). Required for development of axonal processes and for axonal branching.::Mus musculus (taxid: 10090) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 100.00::219-480 PF05496::RuvB_N 99.85::222-442 GO:0051260::protein homooligomerization confident hh_3b9p_A_1::210-502 very confident psy1374 263 Q9CZP5::Mitochondrial chaperone BCS1 ::Chaperone necessary for the assembly of mitochondrial respiratory chain complex III. Plays an important role in the maintenance of mitochondrial tubular networks, respiratory chain assembly and formation of the LETM1 complex.::Mus musculus (taxid: 10090) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.35::1-43 PF08740::BCS1_N 100.00::74-230 GO:0034551::mitochondrial respiratory chain complex III assembly confident hh_4b4t_I_1::1-43 confident psy3811 89 O75351::Vacuolar protein sorting-associated protein 4B ::Involved in late steps of the endosomal multivesicular bodies (MVB) pathway. Recognizes membrane-associated ESCRT-III assemblies and catalyzes their disassembly, possibly in combination with membrane fission. Redistributes the ESCRT-III components to the cytoplasm for further rounds of MVB sorting. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. In conjunction with the ESCRT machinery also appears to function in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis and enveloped virus budding (HIV-1 and other lentiviruses).::Homo sapiens (taxid: 9606) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 96.63::1-33 PF09336::Vps4_C 99.47::48-87 GO:0000815::ESCRT III complex confident hh_1xwi_A_1::1-87 very confident psy3814 69 P52917::Vacuolar protein sorting-associated protein 4 ::Involved in the transport of biosynthetic membrane proteins from the prevacuolar/endosomal compartment to the vacuole. Required for multivesicular body (MVB) protein sorting. Catalyzes the ATP-dependent dissociation of class E VPS proteins from endosomal membranes, such as the disassembly of the ESCRT-III complex.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 96.17::43-69 no hit no match GO:0005634::nucleus confident hh_2qp9_X_1::25-68 very confident psy8938 75 B4F6J6::ATPase family AAA domain-containing protein 1 ::ATPase that plays a critical role in regulating the surface expression of AMPA receptors (AMPAR). Required for NMDA-stimulated AMPAR internalization in an ATPase-dependent manner.::Xenopus tropicalis (taxid: 8364) portable COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.36::31-75 no hit no match GO:0043231::intracellular membrane-bounded organelle confident hh_2qp9_X_1::28-67 confident psy4539 84 A4IHT0::Fidgetin-like protein 1 ::::Xenopus tropicalis (taxid: 8364) confident COG1222::RPT1 ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones] 99.39::35-83 no hit no match GO:0051286::cell tip confident hh_3d8b_A_1::15-82 very confident psy2779 101 Q29AK9::RuvB-like helicase 1 ::Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG1224::TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] 99.94::10-91 PF06068::TIP49 99.94::14-91 GO:0005794::Golgi apparatus confident hh_2c9o_A_1::1-55,63-67,69-85 very confident psy2778 409 Q29AK9::RuvB-like helicase 1 ::Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG1224::TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] 100.00::1-408 PF06068::TIP49 100.00::1-368 GO:0005794::Golgi apparatus very confident hh_2c9o_A_1::2-256,264-408 very confident psy18185 190 Q29AK9::RuvB-like helicase 1 ::Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG1224::TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] 100.00::6-189 PF06068::TIP49 99.98::6-148 GO:0031011::Ino80 complex confident hh_2c9o_A_1::7-189 very confident psy1686 448 Q2TBU9::RuvB-like 2 ::Plays an essential role in oncogenic transformation by MYC and also modulates transcriptional activation by the LEF1/TCF1-CTNNB1 complex. May also inhibit the transcriptional activity of ATF2.::Bos taurus (taxid: 9913) confident COG1224::TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] 100.00::13-328 PF06068::TIP49 100.00::18-288 GO:0031011::Ino80 complex confident hh_3uk6_A_1::3-91,104-271,273-332 very confident psy654 224 Q755G5::RuvB-like helicase 2 ::DNA helicase which participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. The SWR1 complex mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. The INO80 complex remodels chromatin by shifting nucleosomes and is involved in DNA repair. Also involved in pre-rRNA processing.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG1224::TIP49 DNA helicase TIP49, TBP-interacting protein [Transcription] 100.00::1-207 PF06068::TIP49 100.00::1-207 GO:0031011::Ino80 complex confident hh_2c9o_A_1::2-102,105-106,125-125,133-134,138-181,187-207 very confident psy17178 384 Q9BGI2::Peroxiredoxin-4 ::Probably involved in redox regulation of the cell. Regulates the activation of NF-kappa-B in the cytosol by a modulation of I-kappa-B-alpha phosphorylation.::Bos taurus (taxid: 9913) confident COG1225::Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 99.97::49-192 PF00578::AhpC-TSA 99.93::243-376 GO:0005829::cytosol confident rp_1qmv_A_1::241-361 very confident psy5399 156 O14313::Putative peroxiredoxin pmp20 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1225::Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 100.00::1-139 PF08534::Redoxin 99.97::4-155 GO:0005829::cytosol very confident hh_3uma_A_1::1-15,17-156 very confident psy8729 190 A6QLU8::Nucleoredoxin ::Functions as a redox-dependent negative regulator of the Wnt signaling pathway, possibly by preventing ubiquitination of DVL3 by the BCR(KLHL12) complex. May also function as a transcriptional regulator act as a regulator of protein phosphatase 2A (PP2A).::Bos taurus (taxid: 9913) confident COG1225::Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones] 99.62::19-144 PF13905::Thioredoxin_8 99.88::45-138 GO:0044424::intracellular part confident hh_1o8x_A_1::23-34,36-42,44-77,79-131,134-138,141-165 very confident psy11812 152 Q9Y6M5::Zinc transporter 1 ::May be involved in zinc transport out of the cell.::Homo sapiens (taxid: 9606) portable COG1230::CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism] 99.94::1-126 PF01545::Cation_efflux 99.87::3-127 GO:0005773::vacuole confident hh_2zzt_A_1::46-62,64-81,83-127 confident psy7654 373 Q8C0L6::Peroxisomal N(1)-acetyl-spermine/spermidine oxidase ::Flavoenzyme which catalyzes the oxidation of N(1)-acetylspermine to spermidine and is thus involved in the polyamine back-conversion. Can also oxidize N(1)-acetylspermidine to putrescine. Substrate specificity: N(1)-acetylspermine = N(1)-acetylspermidine > N(1),N(12)-diacylspermine >> spermine. Does not oxidize spermidine. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs.::Mus musculus (taxid: 10090) portable COG1231::Monoamine oxidase [Amino acid transport and metabolism] 100.00::41-372 PF01593::Amino_oxidase 99.96::41-367 GO:0008152::metabolic process confident hh_1rsg_A_1::14-28,31-36,39-42,44-57,65-163,167-167,178-178,181-192,197-207,215-215,226-242,244-317,319-329,335-371 very confident psy10795 412 Q9NWM0::Spermine oxidase ::Flavoenzyme which catalyzes the oxidation of spermine to spermidine. Can also use N(1)-acetylspermine and spermidine as substrates, with different affinity depending on the isoform (isozyme) and on the experimental conditions. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs. May contribute to beta-alanine production via aldehyde dehydrogenase conversion of 3-amino-propanal.::Homo sapiens (taxid: 9606) portable COG1231::Monoamine oxidase [Amino acid transport and metabolism] 100.00::77-379 PF01593::Amino_oxidase 99.96::89-374 GO:0008152::metabolic process confident hh_1rsg_A_1::78-87,89-214,216-287,315-315,325-336,342-380 very confident psy13543 184 no hit no match COG1231::Monoamine oxidase [Amino acid transport and metabolism] 99.84::12-183 PF01593::Amino_oxidase 99.55::55-180 GO:0008152::metabolic process confident hh_2yg5_A_1::55-64,72-87,99-130,133-142,149-183 very confident psy10801 153 Q9NWM0::Spermine oxidase ::Flavoenzyme which catalyzes the oxidation of spermine to spermidine. Can also use N(1)-acetylspermine and spermidine as substrates, with different affinity depending on the isoform (isozyme) and on the experimental conditions. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs. May contribute to beta-alanine production via aldehyde dehydrogenase conversion of 3-amino-propanal.::Homo sapiens (taxid: 9606) portable COG1231::Monoamine oxidase [Amino acid transport and metabolism] 99.77::2-152 PF01593::Amino_oxidase 99.66::2-153 GO:0044237::cellular metabolic process confident hh_1b37_A_1::2-45,61-108,111-128,130-153 very confident psy7655 110 Q9NWM0::Spermine oxidase ::Flavoenzyme which catalyzes the oxidation of spermine to spermidine. Can also use N(1)-acetylspermine and spermidine as substrates, with different affinity depending on the isoform (isozyme) and on the experimental conditions. Plays an important role in the regulation of polyamine intracellular concentration and has the potential to act as a determinant of cellular sensitivity to the antitumor polyamine analogs. May contribute to beta-alanine production via aldehyde dehydrogenase conversion of 3-amino-propanal.::Homo sapiens (taxid: 9606) portable COG1231::Monoamine oxidase [Amino acid transport and metabolism] 99.84::1-109 PF01593::Amino_oxidase 99.78::2-108 GO:0044710::single-organism metabolic process confident hh_1b37_A_1::2-22,24-58,61-70,77-109 very confident psy6038 661 O60341::Lysine-specific histone demethylase 1A ::Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me. May play a role in the repression of neuronal genes. Alone, it is unable to demethylate H3K4me on nucleosomes and requires the presence of RCOR1/CoREST to achieve such activity. Also acts as a coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and mediating demethylation of H3K9me, a specific tag for epigenetic transcriptional repression. The presence of PRKCB in ANDR-containing complexes, which mediates phosphorylation of 'Thr-6' of histone H3 (H3T6ph), a specific tag that prevents demethylation H3K4me, prevents H3K4me demethylase activity of KDM1A. Demethylates di-methylated 'Lys-370' of p53/TP53 which prevents interaction of p53/TP53 with TP53BP1 and represses p53/TP53-mediated transcriptional activation. Demethylates and stabilizes the DNA methylase DNMT1. Required for gastrulation during embryogenesis. Component of a RCOR/GFI/KDM1A/HDAC complex that suppresses, via histone deacetylase (HDAC) recruitment, a number of genes implicated in multilineage blood cell development.::Homo sapiens (taxid: 9606) confident COG1231::Monoamine oxidase [Amino acid transport and metabolism] 100.00::137-651 PF01593::Amino_oxidase 100.00::405-646 GO:0055114::oxidation-reduction process confident hh_2z3y_A_1::33-229,235-471,475-653 very confident psy7666 350 P50336::Protoporphyrinogen oxidase ::Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.::Homo sapiens (taxid: 9606) portable COG1232::HemY Protoporphyrinogen oxidase [Coenzyme metabolism] 99.98::82-349 PF01593::Amino_oxidase 99.65::84-150 GO:0043231::intracellular membrane-bounded organelle confident rp_3nks_A_1::91-277,283-349 very confident psy893 523 Q68FT3::Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 ::Probable oxidoreductase.::Rattus norvegicus (taxid: 10116) very confident COG1233::Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-521 PF01593::Amino_oxidase 99.94::224-518 GO:0005507::copper ion binding confident hh_4dgk_A_1::1-37,39-67,69-77,79-85,91-149,152-159,165-194,196-211,216-222,224-260,262-328,340-343,346-349,351-361,365-400,402-412,414-477,484-522 very confident psy895 269 B5A5T4::Protein quiver ::Required for homeostatic regulation of sleep under normal conditions and after sleep deprivation. Important regulator of the Sh K(+) channel, acting as a signaling molecule that connects sleep drive to lowered membrane excitability, possibly by enhancing K(+) channel activity and thus reducing neuronal excitability.::Drosophila melanogaster (taxid: 7227) confident COG1233::Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 99.96::1-267 PF01593::Amino_oxidase 98.93::3-264 GO:0008076::voltage-gated potassium channel complex confident hh_4dgk_A_1::3-47,49-55,61-63,68-146,148-159,161-223,230-268 very confident psy10545 1428 P21685::Phytoene desaturase (lycopene-forming) ::This enzyme converts phytoene into lycopene via the intermediaries of phytofluene, zeta-carotene and neurosporene by the introduction of four double bonds.::Pantoea ananas (taxid: 553) confident COG1233::Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::709-1197 PF05834::Lycopene_cycl 100.00::10-328 GO:0071949::FAD binding confident hh_4dgk_A_1::711-1198 very confident psy16255 156 Q8MKW7::Ribonuclease Z, mitochondrial ::Zinc phosphodiesterase, which displays some tRNA 3'-processing endonuclease activity of nuclear and mitochondrial pre-tRNA. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA. May participate in tRNA processing in the developing embryo.::Drosophila melanogaster (taxid: 7227) confident COG1234::ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] 99.92::31-154 PF12706::Lactamase_B_2 99.58::56-154 GO:0016891::endoribonuclease activity, producing 5'-phosphomonoesters confident hh_2cbn_A_1::31-154 very confident psy16250 485 Q9BQ52::Zinc phosphodiesterase ELAC protein 2 ::Zinc phosphodiesterase, which displays some tRNA 3'-processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA.::Homo sapiens (taxid: 9606) portable COG1234::ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only] 100.00::123-382 PF12706::Lactamase_B_2 99.92::135-353 GO:0042779::tRNA 3'-trailer cleavage confident hh_2cbn_A_1::124-151,153-154,159-215,217-223,227-234,243-243,255-257,259-382 very confident psy17906 174 O35952::Hydroxyacylglutathione hydrolase, mitochondrial ::Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid.::Rattus norvegicus (taxid: 10116) confident COG1237::Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only] 99.04::102-172 PF00753::Lactamase_B 99.14::100-161 GO:0006750::glutathione biosynthetic process confident hh_2qed_A_1::87-110,112-164,168-173 very confident psy13520 238 Q6NYY9::Vacuole membrane protein 1 ::::Danio rerio (taxid: 7955) confident COG1238::Predicted membrane protein [Function unknown] 98.58::117-217 PF09335::SNARE_assoc 98.79::118-217 GO:0000421::autophagic vacuole membrane confident hh_3qil_A_1::13-22,27-37,42-57 portable psy12966 741 Q27874::Integrin beta pat-3 ::Possible role in cell-cell interactions. Integrin alpha pat-1/beta pat-3 is a receptor for laminin. Integrin alpha pat-2/beta pat-3 recognizes the sequence R-G-D in its ligands.::Caenorhabditis elegans (taxid: 6239) confident COG1240::ChlD Mg-chelatase subunit ChlD [Coenzyme metabolism] 97.74::120-336 PF00362::Integrin_beta 100.00::2-444 GO:0043229::intracellular organelle confident hh_3vi3_B_1::2-27,32-61,71-71,83-246,248-282,284-415,419-449 very confident psy17515 1061 Q7Z3S7::Voltage-dependent calcium channel subunit alpha-2/delta-4 ::The alpha-2/delta subunit of voltage-dependent calcium channels regulates calcium current density and activation/inactivation kinetics of the calcium channel.::Homo sapiens (taxid: 9606) portable COG1240::ChlD Mg-chelatase subunit ChlD [Coenzyme metabolism] 99.38::210-384 PF08399::VWA_N 99.96::70-186 GO:0006816::calcium ion transport confident hh_3c8c_A_1::392-419,430-444,450-500,505-507,514-515,535-539,541-547,552-560,567-588,592-600 very confident psy11584 573 Q9UL03::Integrator complex subunit 6 ::Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes. May have a tumor suppressor role; an ectopic expression suppressing tumor cell growth.::Homo sapiens (taxid: 9606) confident COG1240::ChlD Mg-chelatase subunit ChlD [Coenzyme metabolism] 92.12::11-167 PF13519::VWA_2 98.11::10-174 GO:0034472::snRNA 3'-end processing confident hh_1mf7_A_1::10-22,24-63,66-67,74-75,77-77,80-94,97-101,106-106,115-138,140-178 portable psy10004 354 Q7Z3S7::Voltage-dependent calcium channel subunit alpha-2/delta-4 ::The alpha-2/delta subunit of voltage-dependent calcium channels regulates calcium current density and activation/inactivation kinetics of the calcium channel.::Homo sapiens (taxid: 9606) portable COG1240::ChlD Mg-chelatase subunit ChlD [Coenzyme metabolism] 99.72::81-263 PF13768::VWA_3 99.94::83-255 GO:0007528::neuromuscular junction development confident hh_3ibs_A_1::80-115,117-135,145-158,160-181,189-214,223-276 very confident psy13403 195 P49736::DNA replication licensing factor MCM2 ::Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for the entry in S phase and for cell division.::Homo sapiens (taxid: 9606) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 99.80::4-172 PF00493::MCM 99.71::4-91 GO:0000785::chromatin confident hh_3f9v_A_1::4-19,24-28,35-93 very confident psy13876 118 Q6NX31::DNA replication licensing factor mcm7 ::Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. The existence of maternal and zygotic forms of mcm3 and mcm6 suggests that specific forms of mcm2-7 complexes may be used during different stages of development.::Xenopus tropicalis (taxid: 8364) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 99.96::7-118 PF00493::MCM 99.27::74-117 GO:0000785::chromatin confident hh_3f9v_A_1::6-64,69-116 very confident psy14566 532 P97311::DNA replication licensing factor MCM6 ::Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.::Mus musculus (taxid: 10090) portable COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::7-526 PF00493::MCM 100.00::99-526 GO:0003678::DNA helicase activity confident hh_3f9v_A_1::7-40,55-77,92-134,141-157,168-184,186-227,230-253,282-339,341-345,362-367,371-375,383-384,406-411,415-420,450-482,484-526 very confident psy10828 245 I0IUP4::DNA helicase MCM9 ::Component of the MCM8-MCM9 complex, a complex involved in homologous recombination repair following DNA interstrand cross-links and plays a key role during gametogenesis. The MCM8-MCM9 complex probably acts as a hexameric helicase required to process aberrant forks into homologous recombination substrates and to orchestrate homologous recombination with resection, fork stabilization and fork restart.::Gallus gallus (taxid: 9031) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::8-245 PF00493::MCM 100.00::17-245 GO:0005634::nucleus confident hh_3f9v_A_1::18-51,53-59,62-82,87-98,100-164,166-180,185-245 very confident psy2640 613 Q0V9Q6::DNA helicase MCM8 ::Component of the MCM8-MCM9 complex, a complex involved in homologous recombination repair following DNA interstrand cross-links and plays a key role during gametogenesis. The MCM8-MCM9 complex probably acts as a hexameric helicase required to process aberrant forks into homologous recombination substrates and to orchestrate homologous recombination with resection, fork stabilization and fork restart. In eggs, required for elongation during DNA replication by facilitating the recruitment of rpa2/rpa34 and stimulating the processivity of DNA polymerases at replication foci. Probably not required for DNA replication in other cells.::Xenopus tropicalis (taxid: 8364) portable COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::9-502 PF00493::MCM 100.00::15-395 GO:0005634::nucleus confident hh_3f9v_A_1::9-20,22-135,178-253,255-269,305-326,328-373,375-398 very confident psy1366 345 F1N2W9::DNA helicase MCM9 ::Component of the MCM8-MCM9 complex, a complex involved in homologous recombination repair following DNA interstrand cross-links and plays a key role during gametogenesis. The MCM8-MCM9 complex probably acts as a hexameric helicase downstream of the Fanconi anemia proteins BRCA2 and RAD51 and is required to process aberrant forks into homologous recombination substrates and to orchestrate homologous recombination with resection, fork stabilization and fork restart.::Bos taurus (taxid: 9913) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::3-345 PF00493::MCM 100.00::196-345 GO:0005656::nuclear pre-replicative complex confident hh_3f9v_A_1::6-71,75-84,87-187,192-194,196-232,234-344 very confident psy9645 98 P49736::DNA replication licensing factor MCM2 ::Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for the entry in S phase and for cell division.::Homo sapiens (taxid: 9606) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::7-98 PF00493::MCM 99.97::8-98 GO:0005656::nuclear pre-replicative complex confident hh_3f9v_A_1::8-32,34-98 very confident psy7187 214 Q9VGW6::DNA replication licensing factor Mcm5 ::Acts as component of the Mcm2-7 complex (Mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the Mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.::Drosophila melanogaster (taxid: 7227) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::1-214 PF00493::MCM 100.00::1-214 GO:0005656::nuclear pre-replicative complex confident hh_3f9v_A_1::2-99,101-115,122-169,172-214 very confident psy11213 621 Q6NX31::DNA replication licensing factor mcm7 ::Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. The existence of maternal and zygotic forms of mcm3 and mcm6 suggests that specific forms of mcm2-7 complexes may be used during different stages of development.::Xenopus tropicalis (taxid: 8364) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::106-621 PF00493::MCM 100.00::345-621 GO:0005829::cytosol confident hh_3f9v_A_1::86-99,104-165,193-193,202-205,207-219,222-285,288-290,294-523,525-539,544-621 very confident psy17703 720 Q26454::DNA replication licensing factor MCM4 ::Acts as component of the Mcm2-7 complex (Mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the Mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for DNA replication and cell proliferation. Essential role in mitotic DNA replication but not in endoreplication.::Drosophila melanogaster (taxid: 7227) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::1-639 PF00493::MCM 100.00::344-596 GO:0042555::MCM complex confident hh_3f9v_A_1::176-499,501-599 very confident psy899 411 Q8R3C0::Mini-chromosome maintenance complex-binding protein ::Associated component of the MCM complex that acts as a regulator of DNA replication. Binds to the MCM complex during late S phase and promotes the disassembly of the MCM complex from chromatin, thereby acting as a key regulator of pre-replication complex (pre-RC) unloading from replicated DNA. Can dissociate the MCM complex without addition of ATP; probably acts by destabilizing interactions of each individual subunits of the MCM complex. Required for sister chromatid cohesion.::Mus musculus (taxid: 10090) portable COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 100.00::3-395 PF00493::MCM 100.00::83-384 GO:0042555::MCM complex confident hh_3f8t_A_1::4-46,50-58,68-94,96-116,123-133,136-138,142-142,144-171,176-180,182-202,210-238,240-251,258-276,281-281,285-342,361-388 confident psy5804 113 Q9VGW6::DNA replication licensing factor Mcm5 ::Acts as component of the Mcm2-7 complex (Mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the Mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity.::Drosophila melanogaster (taxid: 7227) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 97.84::31-106 PF14551::MCM_N 99.65::31-106 GO:0006261::DNA-dependent DNA replication confident hh_3f9v_A_1::30-105 very confident psy13400 79 P49735::DNA replication licensing factor Mcm2 ::Acts as component of the Mcm2-7 complex (Mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the Mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for DNA replication and cell proliferation.::Drosophila melanogaster (taxid: 7227) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 98.29::11-76 PF14551::MCM_N 99.44::11-69 GO:0043234::protein complex confident hh_3f9v_A_1::6-75 very confident psy13877 114 P33993::DNA replication licensing factor MCM7 ::Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for S-phase checkpoint activation upon UV-induced damage.::Homo sapiens (taxid: 9606) confident COG1241::MCM2 Predicted ATPase involved in replication control, Cdc46/Mcm family [DNA replication, recombination, and repair] 99.22::2-77 no hit no match GO:0000785::chromatin confident hh_3f9v_A_1::11-61 confident psy3055 219 Q6NVL5::Elongator complex protein 3 ::Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. Elongator may play a role in chromatin remodeling. May also have a methyltransferase activity.::Xenopus tropicalis (taxid: 8364) confident COG1243::ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] 100.00::23-202 no hit no match GO:0045202::synapse confident hh_1olt_A_1::151-165,167-169,171-183,186-200 portable psy1687 107 Q8LPJ4::ABC transporter E family member 2 ::::Arabidopsis thaliana (taxid: 3702) confident COG1245::Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only] 99.85::5-104 no hit no match GO:0043024::ribosomal small subunit binding confident hh_3j16_B_1::5-106 very confident psy7904 181 Q9JHD2::Histone acetyltransferase KAT2A ::Functions as a histone acetyltransferase (HAT) to promote transcriptional activation. Acetylation of histones gives a specific tag for epigenetic transcription activation. Has significant histone acetyltransferase activity with core histones, but not with nucleosome core particles (By similarity). Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4.::Mus musculus (taxid: 10090) confident COG1246::ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] 99.47::5-97 PF00583::Acetyltransf_1 99.58::6-81 GO:0042826::histone deacetylase binding confident hh_1z4r_A_1::3-115 very confident psy6918 123 Q9VAI0::Probable glucosamine 6-phosphate N-acetyltransferase ::::Drosophila melanogaster (taxid: 7227) confident COG1247::Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] 99.66::6-118 PF00583::Acetyltransf_1 99.79::36-113 GO:0005829::cytosol confident hh_1i12_A_1::36-122 very confident psy837 226 Q8VE10::N-alpha-acetyltransferase 40 ::::Mus musculus (taxid: 10090) confident COG1247::Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] 99.69::46-208 PF00583::Acetyltransf_1 99.71::104-181 GO:0008080::N-acetyltransferase activity confident hh_3fix_A_1::36-42,45-50,54-75,77-102,105-116,121-187,198-206 very confident psy17026 435 Q9GZZ1::N-alpha-acetyltransferase 50 ::Probable catalytic component of the NAA11-NAA15 complex which displays alpha (N-terminal) acetyltransferase activity.::Homo sapiens (taxid: 9606) confident COG1247::Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] 99.67::104-253 PF13420::Acetyltransf_4 99.62::106-237 GO:0005504::fatty acid binding confident bp_2ob0_A_2::273-421,424-429 very confident psy13682 175 Q6P632::N-alpha-acetyltransferase 20 ::Catalytic subunit of the NatB complex which catalyzes acetylation of the N-terminal methionine residues of peptides beginning with Met-Asp-Glu. May play a role in normal cell-cycle progression.::Xenopus tropicalis (taxid: 8364) very confident COG1247::Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] 99.88::1-153 PF13420::Acetyltransf_4 99.85::4-137 GO:0005829::cytosol very confident hh_2x7b_A_1::1-48,50-139,142-151 very confident psy631 110 Q7PCJ8::Diamine acetyltransferase 2 ::Enzyme which catalyzes the acetylation of polyamines. Substrate specificity: norspermidine > spermidine = spermine >> N(1)acetylspermine = putrescine.::Bos taurus (taxid: 9913) confident COG1247::Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] 99.59::4-110 PF13527::Acetyltransf_9 99.66::5-109 GO:0004145::diamine N-acetyltransferase activity confident hh_2fe7_A_1::2-46,48-60,63-109 very confident psy16071 225 Q94521::Dopamine N-acetyltransferase ::Catalyzes N-acetylation of tryptamine, tyramine, dopamine, serotonin and octopamine. Is not essential for sclerotization.::Drosophila melanogaster (taxid: 7227) portable COG1247::Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] 99.68::12-198 PF13527::Acetyltransf_9 99.74::13-190 GO:0006584::catecholamine metabolic process confident hh_4fd5_A_1::10-200,202-224 very confident psy16200 183 Q6NYG8::Dihydropyrimidine dehydrogenase [NADP(+)] ::Involved in pyrimidine base degradation. Catalyzes the reduction of uracil and thymine.::Danio rerio (taxid: 7955) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 99.85::10-182 PF00070::Pyr_redox 99.37::71-146 GO:0050661::NADP binding confident rp_1gte_A_1::6-58,61-179 very confident psy9583 866 P52992::Dihydrolipoyl dehydrogenase ::The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).::Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 100.00::388-856 PF00198::2-oxoacid_dh 100.00::169-384 GO:0005576::extracellular region confident hh_3lad_A_1::390-513,519-653,659-865 very confident psy1545 454 Q8WU10::Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 100.00::2-451 PF00743::FMO-like 99.88::3-349 GO:0002119::nematode larval development confident hh_3cgb_A_1::3-170,172-187,229-246,250-257,259-278,280-349,356-448 very confident psy810 227 P38866::Thiol-specific monooxygenase ::Flavin-dependent oxidation of thiol-containing compounds. Probably required for the correct folding of disulfide-bonded proteins.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 99.88::3-215 PF00743::FMO-like 99.92::42-215 GO:0004497::monooxygenase activity confident hh_4a9w_A_1::41-58,62-71,73-141,143-194,196-200,203-211 very confident psy11185 312 Q17745::Thioredoxin reductase 1 ::::Caenorhabditis elegans (taxid: 6239) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 99.92::101-311 PF00743::FMO-like 99.74::105-312 GO:0004791::thioredoxin-disulfide reductase activity confident rp_3dgh_A_1::99-183,186-242,244-295 very confident psy3825 332 Q17745::Thioredoxin reductase 1 ::::Caenorhabditis elegans (taxid: 6239) portable COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 100.00::14-312 PF02852::Pyr_redox_dim 99.90::247-313 GO:0004791::thioredoxin-disulfide reductase activity confident hh_3dgh_A_1::12-43,45-45,47-142,217-220,245-258,260-321 very confident psy14461 535 Q74ZK4::Glutathione reductase ::Maintains high levels of reduced glutathione in the cytosol.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) portable COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 100.00::88-535 PF02852::Pyr_redox_dim 99.78::416-535 GO:0004791::thioredoxin-disulfide reductase activity confident hh_4dna_A_1::89-120,122-318,322-325,329-382,384-441,444-459,461-462,485-535 very confident psy11186 212 Q9JLT4::Thioredoxin reductase 2, mitochondrial ::Maintains thioredoxin in a reduced state. Implicated in the defenses against oxidative stress. May play a role in redox-regulated cell signaling.::Mus musculus (taxid: 10090) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 100.00::3-196 PF02852::Pyr_redox_dim 99.92::83-196 GO:0004791::thioredoxin-disulfide reductase activity confident hh_3dgh_A_1::4-13,15-15,17-39,51-141,143-203 very confident psy14927 1074 Q8CIZ7::Dihydrolipoyl dehydrogenase, mitochondrial ::Lipoamide dehydrogenase is a component of the glycine cleavage system as well as of the alpha-ketoacid dehydrogenase complexes. Involved in the hyperactivation of spermatazoa during capacitation and in the spermatazoal acrosome reaction.::Cricetulus griseus (taxid: 10029) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 100.00::856-1072 PF02852::Pyr_redox_dim 99.59::419-533 GO:0005730::nucleolus confident hh_3urh_A_1::794-942,944-989,991-1073 very confident psy7674 164 P30635::Probable glutathione reductase 2 ::Maintains high levels of reduced glutathione in the cytosol.::Caenorhabditis elegans (taxid: 6239) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 99.69::73-163 PF13738::Pyr_redox_3 98.86::73-164 GO:0042803::protein homodimerization activity confident hh_3dgz_A_1::74-163 very confident psy7665 296 Q9N2I8::Thioredoxin reductase 2, mitochondrial ::Maintains thioredoxin in a reduced state. Implicated in the defenses against oxidative stress. May play a role in redox-regulated cell signaling.::Bos taurus (taxid: 9913) confident COG1249::Lpd Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes [Energy production and conversion] 99.94::114-294 PF13738::Pyr_redox_3 99.53::119-294 GO:0055114::oxidation-reduction process confident rp_3dgh_A_1::113-272 very confident psy3940 83 Q61425::Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial ::Plays an essential role in the mitochondrial beta-oxidation of short chain fatty acids. Exerts it highest activity toward 3-hydroxybutyryl-CoA.::Mus musculus (taxid: 10090) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 99.95::1-83 PF00725::3HCDH 99.97::1-81 GO:0005743::mitochondrial inner membrane confident hh_1f0y_A_1::1-51,53-82 very confident psy3941 83 Q61425::Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial ::Plays an essential role in the mitochondrial beta-oxidation of short chain fatty acids. Exerts it highest activity toward 3-hydroxybutyryl-CoA.::Mus musculus (taxid: 10090) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 99.95::1-83 PF00725::3HCDH 99.97::1-81 GO:0005743::mitochondrial inner membrane confident hh_1f0y_A_1::1-51,53-82 very confident psy9061 99 P40939::Trifunctional enzyme subunit alpha, mitochondrial ::Bifunctional subunit.::Homo sapiens (taxid: 9606) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 99.22::47-96 PF00725::3HCDH 99.51::50-96 GO:0055114::oxidation-reduction process confident hh_1wdk_A_1::4-40,42-96 very confident psy9058 142 P40939::Trifunctional enzyme subunit alpha, mitochondrial ::Bifunctional subunit.::Homo sapiens (taxid: 9606) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 99.84::45-141 PF00725::3HCDH 99.93::49-141 GO:0055114::oxidation-reduction process confident hh_1wdk_A_1::5-40,42-114,116-134,136-141 very confident psy3942 160 P77851::3-hydroxybutyryl-CoA dehydrogenase ::::Thermoanaerobacterium thermosaccharolyticum (strain ATCC 7956 / DSM 571 / NCIB 9385 / NCA 3814) (taxid: 580327) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 100.00::2-160 PF02737::3HCDH_N 100.00::2-155 GO:0005829::cytosol confident hh_1f0y_A_1::2-159 very confident psy9059 269 P40939::Trifunctional enzyme subunit alpha, mitochondrial ::Bifunctional subunit.::Homo sapiens (taxid: 9606) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 100.00::51-269 PF02737::3HCDH_N 100.00::51-173 GO:0005875::microtubule associated complex confident hh_1f0y_A_1::52-68,71-83,86-109,112-243,246-269 very confident psy9056 359 P40939::Trifunctional enzyme subunit alpha, mitochondrial ::Bifunctional subunit.::Homo sapiens (taxid: 9606) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 99.95::218-359 PF02737::3HCDH_N 99.95::222-359 GO:0006635::fatty acid beta-oxidation confident hh_1wdk_A_1::1-22,25-82,96-123,133-359 very confident psy17416 290 P14755::Lambda-crystallin ::Functions as crystallin in the rabbit eye lens. Has high L-gulonate 3-dehydrogenase activity.::Oryctolagus cuniculus (taxid: 9986) portable COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 100.00::1-155 PF02737::3HCDH_N 100.00::122-290 GO:0016616::oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor confident hh_3ado_A_2::122-290 very confident psy13746 294 P14755::Lambda-crystallin ::Functions as crystallin in the rabbit eye lens. Has high L-gulonate 3-dehydrogenase activity.::Oryctolagus cuniculus (taxid: 9986) confident COG1250::FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism] 100.00::11-293 PF02737::3HCDH_N 100.00::15-237 GO:0055114::oxidation-reduction process confident hh_1f0y_A_1::10-55,99-234,236-279,283-293 very confident psy2951 1466 Q10499::Apoptosis-inducing factor 1 ::Putative FAD-dependent oxidoreductase involved in the resistance to cercosporin and other singlet oxygen-generating photosensitizers. Translocates from mitochondria to the nucleus under apoptotic conditions, where it degrades DNA and induces apoptosis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1251::NirB NAD(P)H-nitrite reductase [Energy production and conversion] 100.00::1066-1457 PF00743::FMO-like 99.80::1067-1379 GO:0044237::cellular metabolic process confident hh_3klj_A_1::1063-1089,1092-1145,1147-1180,1182-1273,1289-1318,1320-1321,1323-1349,1357-1411,1413-1456 very confident psy14914 216 P49326::Dimethylaniline monooxygenase [N-oxide-forming] 5 ::In contrast with other forms of FMO it does not seem to be a drug-metabolizing enzyme.::Homo sapiens (taxid: 9606) portable COG1252::Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] 96.90::18-117 PF00743::FMO-like 100.00::9-211 GO:0055114::oxidation-reduction process confident hh_2gv8_A_1::17-136,139-163,165-167 very confident psy8791 706 Q9Y6N5::Sulfide:quinone oxidoreductase, mitochondrial ::Catalyzes the oxidation of hydrogen sulfide, with the help of a quinone.::Homo sapiens (taxid: 9606) portable COG1252::Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion] 100.00::29-415 PF07992::Pyr_redox_2 99.65::32-143 GO:0005737::cytoplasm confident hh_3sx6_A_1::30-145,183-186,191-223,225-296,299-343,345-417,422-445,447-459,461-470 very confident psy4850 64 P0C588::Metal transporter CNNM4 ::Probable metal transporter. The interaction with the metal ion chaperone COX11 suggests that it may play a role in sensory neuron functions. May play a role in biomineralization and retinal function.::Rattus norvegicus (taxid: 10116) confident COG1253::TlyC Hemolysins and related proteins containing CBS domains [General function prediction only] 99.53::6-64 PF00571::CBS 95.91::31-64 GO:0015693::magnesium ion transport confident hh_3lv9_A_1::8-51,53-64 confident psy17076 71 Q0GA42::Metal transporter CNNM1 ::Probable metal transporter.::Mus musculus (taxid: 10090) confident COG1253::TlyC Hemolysins and related proteins containing CBS domains [General function prediction only] 99.47::11-71 PF00571::CBS 95.18::39-71 GO:0015693::magnesium ion transport confident hh_3ocm_A_1::13-59,61-71 confident psy4847 396 Q9USJ3::Uncharacterized protein C4B3.03c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1253::TlyC Hemolysins and related proteins containing CBS domains [General function prediction only] 99.97::3-233 PF00571::CBS 98.42::45-101 GO:0015693::magnesium ion transport confident hh_3jtf_A_1::40-65,67-114,119-140,142-149,158-177,179-181 very confident psy17078 68 Q0GA42::Metal transporter CNNM1 ::Probable metal transporter.::Mus musculus (taxid: 10090) confident COG1253::TlyC Hemolysins and related proteins containing CBS domains [General function prediction only] 99.03::13-58 no hit no match GO:0015693::magnesium ion transport confident hh_3ocm_A_1::14-60 confident psy9027 448 Q38862::Inositol-3-phosphate synthase isozyme 2 ::::Arabidopsis thaliana (taxid: 3702) confident COG1260::INO1 Myo-inositol-1-phosphate synthase [Lipid metabolism] 100.00::137-446 PF07994::NAD_binding_5 100.00::1-448 GO:0009793::embryo development ending in seed dormancy confident hh_1vko_A_1::1-175,218-418,421-448 very confident psy8678 394 Q0P5L5::Sulfatase-modifying factor 1 ::Using molecular oxygen and an unidentified reducing agent, oxidizes a cysteine residue in the substrate sulfatase to an active site 3-oxoalanine residue, which is also called C(alpha)-formylglycine. Known substrates include GALNS, ARSA, STS and ARSE.::Bos taurus (taxid: 9913) confident COG1262::Uncharacterized conserved protein [Function unknown] 100.00::9-343 PF03781::FGE-sulfatase 100.00::12-341 GO:0044281::small molecule metabolic process confident hh_1y4j_A_1::13-30,32-96,118-122,132-134,138-141,150-150,160-227,231-283,297-347 very confident psy16337 104 Q03530::CAAX prenyl protease 2 ::Proteolytically removes the C-terminal three residues of farnesylated a-factor mating pheromone and of RAS.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1266::Predicted metal-dependent membrane protease [General function prediction only] 96.26::18-53 PF02517::Abi 98.26::19-54 GO:0071586::CAAX-box protein processing confident no hit no match psy653 91 P25286::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Rattus norvegicus (taxid: 10116) confident COG1269::NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] 90.46::5-47 PF01496::V_ATPase_I 99.01::26-72 GO:0005769::early endosome very confident hh_3rrk_A_1::2-72 confident psy6250 778 P25286::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Rattus norvegicus (taxid: 10116) confident COG1269::NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] 100.00::127-777 PF01496::V_ATPase_I 100.00::2-777 GO:0005769::early endosome confident hh_2nvj_A_1::691-716 very confident psy17051 152 P25286::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Rattus norvegicus (taxid: 10116) confident COG1269::NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] 96.11::47-150 PF01496::V_ATPase_I 99.71::41-150 GO:0005794::Golgi apparatus confident hh_3rrk_A_1::41-76,89-102,104-150 confident psy510 380 P25286::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Rattus norvegicus (taxid: 10116) confident COG1269::NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] 100.00::34-291 PF01496::V_ATPase_I 100.00::2-294 GO:0016324::apical plasma membrane confident hh_3rrk_A_1::2-20,33-46,48-131,134-160,162-163,167-211 confident psy15627 77 Q29466::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Bos taurus (taxid: 9913) confident COG1269::NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] 91.78::5-47 PF01496::V_ATPase_I 97.80::26-56 GO:0016324::apical plasma membrane confident hh_3rrk_A_1::2-48 confident psy15628 90 Q29466::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Bos taurus (taxid: 9913) confident COG1269::NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] 90.24::5-45 PF01496::V_ATPase_I 99.17::26-73 GO:0031090::organelle membrane confident hh_3rrk_A_1::2-74 confident psy15626 153 P25286::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Rattus norvegicus (taxid: 10116) portable COG1269::NtpI Archaeal/vacuolar-type H+-ATPase subunit I [Energy production and conversion] 94.89::1-30 PF01496::V_ATPase_I 99.77::17-151 GO:0042221::response to chemical stimulus confident hh_3rrk_A_1::1-30,50-90,98-146 confident psy10148 108 Q6TCH7::Progestin and adipoQ receptor family member 3 ::Functions as a spatial regulator of RAF1 kinase by sequestrating it to the Golgi.::Homo sapiens (taxid: 9606) portable COG1272::Predicted membrane protein, hemolysin III homolog [General function prediction only] 99.67::9-108 PF03006::HlyIII 99.95::6-101 GO:0005488::binding confident no hit no match psy15881 248 Q6TCH7::Progestin and adipoQ receptor family member 3 ::Functions as a spatial regulator of RAF1 kinase by sequestrating it to the Golgi.::Homo sapiens (taxid: 9606) portable COG1272::Predicted membrane protein, hemolysin III homolog [General function prediction only] 100.00::55-233 PF03006::HlyIII 100.00::79-227 GO:0005488::binding confident no hit no match psy15882 149 Q6TCH7::Progestin and adipoQ receptor family member 3 ::Functions as a spatial regulator of RAF1 kinase by sequestrating it to the Golgi.::Homo sapiens (taxid: 9606) portable COG1272::Predicted membrane protein, hemolysin III homolog [General function prediction only] 99.66::12-134 PF03006::HlyIII 99.97::1-126 GO:0005886::plasma membrane confident no hit no match psy2033 124 Q9VCY8::ADIPOR-like receptor CG5315 ::Probable receptor, which may be involved in metabolic pathways that regulate lipid metabolism such as fatty acid oxidation.::Drosophila melanogaster (taxid: 7227) confident COG1272::Predicted membrane protein, hemolysin III homolog [General function prediction only] 99.61::8-108 PF03006::HlyIII 99.92::11-100 GO:0046982::protein heterodimerization activity confident no hit no match psy5581 240 Q9D099::Alkaline ceramidase 3 ::Hydrolyzes only phytoceramide into phytosphingosine and free fatty acid. Does not have reverse activity.::Mus musculus (taxid: 10090) confident COG1272::Predicted membrane protein, hemolysin III homolog [General function prediction only] 96.75::31-235 PF05875::Ceramidase 100.00::8-239 GO:0046512::sphingosine biosynthetic process confident no hit no match psy13077 630 B2HMX9::Phosphoenolpyruvate carboxykinase [GTP] ::Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.::Mycobacterium marinum (strain ATCC BAA-535 / M) (taxid: 216594) very confident COG1274::PckA Phosphoenolpyruvate carboxykinase (GTP) [Energy production and conversion] 100.00::18-630 PF00821::PEPCK 100.00::35-630 GO:0005829::cytosol very confident hh_3moe_A_1::18-115,117-194,196-552,554-578,580-630 very confident psy17657 652 P20007::Phosphoenolpyruvate carboxykinase [GTP] ::Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.::Drosophila melanogaster (taxid: 7227) very confident COG1274::PckA Phosphoenolpyruvate carboxykinase (GTP) [Energy production and conversion] 100.00::27-638 PF00821::PEPCK 100.00::43-639 GO:0005829::cytosol very confident hh_3moe_A_1::26-123,125-200,202-555,557-570,573-581,589-640 very confident psy13078 325 O06084::Phosphoenolpyruvate carboxykinase [GTP] ::Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.::Mycobacterium leprae (taxid: 1769) confident COG1274::PckA Phosphoenolpyruvate carboxykinase (GTP) [Energy production and conversion] 100.00::20-320 PF00821::PEPCK 100.00::35-321 GO:0043229::intracellular organelle confident hh_3moe_A_1::19-115,117-194,196-321 very confident psy12844 121 P0A9Y4::Cold shock protein CspA ::Binds to and stimulates the transcription of the CCAAT-containing, cold-shock-inducible promoters of the H-NS and GyrA proteins. Binds also to the inverted repeat 5'-ATTGG-3'.::Shigella flexneri (taxid: 623) confident COG1278::CspC Cold shock proteins [Transcription] 99.94::13-85 PF00313::CSD 99.89::14-85 GO:0003727::single-stranded RNA binding confident hh_3i2z_B_1::13-32,35-53,57-75,77-85 very confident psy3654 140 Q9VVA0::Cold shock domain-containing protein CG9705 ::::Drosophila melanogaster (taxid: 7227) very confident COG1278::CspC Cold shock proteins [Transcription] 99.89::58-125 PF00313::CSD 99.85::59-125 GO:0005829::cytosol very confident hh_3aqq_A_1::29-138 very confident psy547 282 Q9KN00::Cold shock-like protein CspA ::::Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277) portable COG1278::CspC Cold shock proteins [Transcription] 99.90::33-102 PF00313::CSD 99.80::34-103 GO:0009409::response to cold confident hh_1g6p_A_2::201-221,223-236,241-269 very confident psy3660 144 Q9VVA0::Cold shock domain-containing protein CG9705 ::::Drosophila melanogaster (taxid: 7227) portable COG1278::CspC Cold shock proteins [Transcription] 99.82::78-138 PF00313::CSD 99.63::79-138 GO:0031564::transcription antitermination confident no hit no match psy9900 191 P67809::Nuclease-sensitive element-binding protein 1 ::The secreted form acts as an extracellular mitogen and stimulates cell migration and proliferation.::Homo sapiens (taxid: 9606) confident COG1278::CspC Cold shock proteins [Transcription] 99.91::8-77 PF00313::CSD 99.82::9-77 GO:0070937::CRD-mediated mRNA stability complex confident hh_1g6p_A_2::110-130,132-145,150-180 very confident psy2410 198 Q8ZHV1::Thymidylate synthase ::Provides the sole de novo source of dTMP for DNA biosynthesis.::Yersinia pestis (taxid: 632) confident COG1280::RhtB Putative threonine efflux protein [Amino acid transport and metabolism] 99.97::1-165 PF01810::LysE 99.89::15-156 GO:0005829::cytosol confident hh_1hw4_A_1::103-198 very confident psy12509 194 Q54NM9::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 ::Component of the N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the endoplasmic reticulum (ER). Sst3 seems to be involved in complex substrate specificity.::Dictyostelium discoideum (taxid: 44689) confident COG1287::Uncharacterized membrane protein, required for N-linked glycosylation [General function prediction only] 99.96::16-194 PF02516::STT3 100.00::15-193 GO:0008250::oligosaccharyltransferase complex confident hh_3rce_A_1::16-56,59-62,68-70,79-91,95-97,100-192 very confident psy336 121 Q8CCP0::Nuclear export mediator factor Nemf ::Plays a role in nuclear export.::Mus musculus (taxid: 10090) confident COG1293::Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription] 99.89::1-119 PF05833::FbpA 99.94::1-119 GO:0051168::nuclear export confident hh_3doa_A_1::1-99,102-119 very confident psy4691 380 Q8CCP0::Nuclear export mediator factor Nemf ::Plays a role in nuclear export.::Mus musculus (taxid: 10090) portable COG1293::Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription] 100.00::80-367 PF05833::FbpA 99.68::16-280 GO:0051168::nuclear export confident hh_3doa_A_1::52-57,67-72,74-95 portable psy2491 162 P43006::Excitatory amino acid transporter 2 ::Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium.::Mus musculus (taxid: 10090) portable COG1301::GltP Na+/H+-dicarboxylate symporters [Energy production and conversion] 99.97::6-162 PF00375::SDF 99.96::21-162 GO:0005794::Golgi apparatus confident hh_2nwl_A_1::6-88,93-102,105-135,137-162 confident psy2489 369 P43006::Excitatory amino acid transporter 2 ::Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium.::Mus musculus (taxid: 10090) portable COG1301::GltP Na+/H+-dicarboxylate symporters [Energy production and conversion] 100.00::22-355 PF00375::SDF 100.00::20-352 GO:0005794::Golgi apparatus confident hh_2nwl_A_1::20-32,36-54,56-151,153-158,160-186,188-226,228-255,258-266,270-313,315-316,321-324,326-354,356-360 very confident psy14035 90 Q22682::Putative sodium-dependent excitatory amino acid transporter glt-4 ::::Caenorhabditis elegans (taxid: 6239) confident COG1301::GltP Na+/H+-dicarboxylate symporters [Energy production and conversion] 99.52::12-86 PF00375::SDF 99.51::12-86 GO:0005794::Golgi apparatus confident hh_2nwl_A_1::12-86 very confident psy907 472 no hit no match COG1301::GltP Na+/H+-dicarboxylate symporters [Energy production and conversion] 100.00::1-434 PF00375::SDF 100.00::1-426 GO:0005794::Golgi apparatus confident no hit no match psy13811 297 P51906::Excitatory amino acid transporter 3 ::Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium. Negatively regulated by ARL6IP5.::Mus musculus (taxid: 10090) portable COG1301::GltP Na+/H+-dicarboxylate symporters [Energy production and conversion] 100.00::43-297 PF00375::SDF 100.00::37-297 GO:0030425::dendrite confident hh_2nwl_A_1::43-121,124-124,127-153,170-170,172-235,237-243,245-270,272-297 very confident psy13812 120 P43006::Excitatory amino acid transporter 2 ::Transports L-glutamate and also L- and D-aspartate. Essential for terminating the postsynaptic action of glutamate by rapidly removing released glutamate from the synaptic cleft. Acts as a symport by cotransporting sodium.::Mus musculus (taxid: 10090) confident COG1301::GltP Na+/H+-dicarboxylate symporters [Energy production and conversion] 100.00::2-117 PF00375::SDF 99.97::2-117 GO:0044708::single-organism behavior confident hh_2nwl_A_1::3-6,8-35,37-75,77-117 very confident psy1056 590 Q5RGV1::Inosine-5'-monophosphate dehydrogenase 1b ::Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.::Danio rerio (taxid: 7955) confident COG1304::idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] 99.77::358-558 PF00478::IMPDH 100.00::69-580 GO:0055114::oxidation-reduction process confident rp_1jcn_A_1::211-243,245-387,389-398,411-499,503-506,508-590 very confident psy7649 100 Q9NYQ3::Hydroxyacid oxidase 2 ::Catalyzes the oxidation of L-alpha-hydroxy acids as well as, more slowly, that of L-alpha-amino acids.::Homo sapiens (taxid: 9606) confident COG1304::idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] 99.86::1-75 PF01070::FMN_dh 99.82::1-72 GO:0005777::peroxisome confident hh_2nzl_A_1::1-74 very confident psy16780 202 Q9UJM8::Hydroxyacid oxidase 1 ::Has 2-hydroxyacid oxidase activity. Most active on the 2-carbon substrate glycolate, but is also active on 2-hydroxy fatty acids, with high activity towards 2-hydroxy palmitate and 2-hydroxy octanoate.::Homo sapiens (taxid: 9606) confident COG1304::idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] 99.97::40-198 PF01070::FMN_dh 100.00::36-194 GO:0005777::peroxisome confident hh_3sgz_A_1::45-195,200-202 very confident psy13219 193 Q9UJM8::Hydroxyacid oxidase 1 ::Has 2-hydroxyacid oxidase activity. Most active on the 2-carbon substrate glycolate, but is also active on 2-hydroxy fatty acids, with high activity towards 2-hydroxy palmitate and 2-hydroxy octanoate.::Homo sapiens (taxid: 9606) portable COG1304::idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] 100.00::1-193 PF01070::FMN_dh 100.00::1-193 GO:0055114::oxidation-reduction process confident hh_2nzl_A_1::1-140,143-145,147-150,154-192 very confident psy7088 873 Q9VF87::Cytoplasmic FMR1-interacting protein ::Plays a role in guidance and morphology of central and peripheral axons and in synaptic morphology. Also required for formation of cell membrane protrusions and for bristle development.::Drosophila melanogaster (taxid: 7227) confident COG1304::idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] 99.94::1-260 PF05994::FragX_IP 100.00::141-828 GO:0031209::SCAR complex confident hh_3p8c_A_1::142-188,212-315,317-412,432-433,440-471,473-857 very confident psy7363 552 P23606::Protein-glutamine gamma-glutamyltransferase K ::Catalyzes the cross-linking of proteins and the conjugation of polyamines to proteins. Responsible for cross-linking epidermal proteins during formation of the stratum corneum.::Rattus norvegicus (taxid: 10116) portable COG1305::Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism] 98.18::146-263 PF00927::Transglut_C 99.64::373-479 GO:0005509::calcium ion binding confident hh_1ex0_A_1::9-78,80-158,161-172,190-241,243-304,306-379,381-402,404-512 very confident psy18189 119 Q68F90::Nascent polypeptide-associated complex subunit alpha ::May promote appropriate targeting of ribosome-nascent polypeptide complexes.::Xenopus tropicalis (taxid: 8364) confident COG1308::EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription] 97.98::66-106 PF01849::NAC 99.77::65-117 GO:0005634::nucleus confident hh_3mce_A_1::69-117 very confident psy2782 147 Q94518::Nascent polypeptide-associated complex subunit alpha ::May promote appropriate targeting of ribosome-nascent polypeptide complexes (By similarity). Required for correct localization of the osk/oskar protein to the posterior pole during embryonic development. The osk protein directs the recruitment of molecules responsible for posterior body patterning and germline formation in the embryo.::Drosophila melanogaster (taxid: 7227) very confident COG1308::EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription] 98.02::65-118 PF01849::NAC 99.89::65-122 GO:0005634::nucleus confident hh_3mce_A_1::69-125 very confident psy12141 142 Q5M8V0::Transcription factor BTF3 homolog 4 ::::Xenopus tropicalis (taxid: 8364) very confident COG1308::EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription] 96.61::46-101 PF01849::NAC 99.86::48-105 GO:0005875::microtubule associated complex confident hh_3lkx_A_1::60-125 very confident psy9211 226 Q7PVR3::Eukaryotic translation initiation factor 3 subunit H ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) confident COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 97.29::5-58 PF01398::JAB 98.82::1-44 GO:0005829::cytosol confident hh_2znr_A_1::8-55,61-84 confident psy4542 273 Q7QD36::Eukaryotic translation initiation factor 3 subunit F ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) very confident COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 98.12::7-119 PF01398::JAB 99.94::2-111 GO:0005829::cytosol confident hh_2o95_A_1::3-175 very confident psy401 326 Q5REY0::COP9 signalosome complex subunit 6 ::Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1 and IRF8, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively. Has some glucocorticoid receptor-responsive activity.::Pongo abelii (taxid: 9601) very confident COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 98.00::40-154 PF01398::JAB 99.94::35-146 GO:0008180::signalosome very confident hh_4e0q_A_1::32-170 very confident psy9085 394 Q6P635::COP9 signalosome complex subunit 5 ::Probable protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity. In the complex, it probably acts as the catalytic center that mediates the cleavage of nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex.::Xenopus tropicalis (taxid: 8364) very confident COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 99.60::108-225 PF01398::JAB 99.93::104-216 GO:0046328::regulation of JNK cascade very confident bp_4f7o_A_1::64-302 very confident psy1714 449 Q6P635::COP9 signalosome complex subunit 5 ::Probable protease subunit of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity. In the complex, it probably acts as the catalytic center that mediates the cleavage of nedd8 from cullins. It however has no metalloprotease activity by itself and requires the other subunits of the CSN complex.::Xenopus tropicalis (taxid: 8364) very confident COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 99.62::163-261 PF01398::JAB 99.93::159-272 GO:0046328::regulation of JNK cascade very confident hh_2znr_A_1::158-221,223-223,225-225,229-233,236-283,290-303 very confident psy17875 107 Q5R9L6::Lys-63-specific deubiquitinase BRCC36 ::Metalloprotease that specifically cleaves 'Lys-63'-linked polyubiquitin chains. Does not have activity toward 'Lys-48'-linked polyubiquitin chains. Component of the BRCA1-A complex, a complex that specifically recognizes 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs). In the BRCA1-A complex, it specifically removes 'Lys-63'-linked ubiquitin on histones H2A and H2AX, antagonizing the RNF8-dependent ubiquitination at double-strand breaks (DSBs). Catalytic subunit of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked ubiquitin in various substrates. Mediates the specific 'Lys-63'-specific deubiquitination associated with the COP9 signalosome complex (CSN), via the interaction of the BRISC complex with the CSN complex.::Pongo abelii (taxid: 9601) portable COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 99.80::6-106 PF01398::JAB 99.89::2-106 GO:0050790::regulation of catalytic activity confident hh_2znr_A_1::2-42,47-56,58-73,77-79,86-106 very confident psy15735 574 O35593::26S proteasome non-ATPase regulatory subunit 14 ::Metalloprotease component of the 26S proteasome that specifically cleaves 'Lys-63'-linked polyubiquitin chains. The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The function of the 'Lys-63'-specific deubiquitination of the proteasome is unclear.::Mus musculus (taxid: 10090) very confident COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 99.52::191-307 PF01398::JAB 99.91::187-299 GO:0061133::endopeptidase activator activity very confident hh_4b4t_V_1::160-170,172-175,180-370 very confident psy10969 204 Q9Y3B6::ER membrane protein complex subunit 9 ::::Homo sapiens (taxid: 9606) confident COG1310::Predicted metal-dependent protease of the PAD1/JAB1 superfamily [General function prediction only] 94.19::4-98 PF03665::UPF0172 100.00::1-196 GO:0072546::ER membrane protein complex confident hh_4e0q_A_1::3-34,41-91,97-98,100-125 confident psy8633 327 Q6AXY4::DNA polymerase delta subunit 2 ::::Rattus norvegicus (taxid: 10116) confident COG1311::HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] 100.00::4-322 PF04042::DNA_pol_E_B 99.96::155-280 GO:0006261::DNA-dependent DNA replication confident hh_3e0j_A_1::4-39,42-326 very confident psy2623 707 O54956::DNA polymerase epsilon subunit 2 ::Participates in DNA repair and in chromosomal DNA replication.::Mus musculus (taxid: 10090) portable COG1311::HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] 99.92::265-672 PF04042::DNA_pol_E_B 99.97::431-645 GO:0008622::epsilon DNA polymerase complex confident hh_3flo_A_1::272-302,320-356,359-396,416-487,499-505,509-510,512-515,518-544,549-582,584-657,660-663 confident psy8637 216 Q6AXY4::DNA polymerase delta subunit 2 ::::Rattus norvegicus (taxid: 10116) portable COG1311::HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] 99.12::27-168 PF05997::Nop52 99.22::190-215 GO:0005730::nucleolus confident hh_3e0j_A_1::7-69,72-178,181-210 very confident psy13881 140 Q7SIA8::Divalent-cation tolerance protein CutA ::Involved in resistance toward heavy metals.::Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) (taxid: 300852) confident COG1324::CutA Uncharacterized protein involved in tolerance to divalent cations [Inorganic ion transport and metabolism] 100.00::37-139 PF03091::CutA1 100.00::38-139 GO:0008104::protein localization confident hh_1osc_A_1::18-139 very confident psy7224 297 P33908::Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA ::Involved in the maturation of Asn-linked oligosaccharides. Progressively trim alpha-1,2-linked mannose residues from Man(9)GlcNAc(2) to produce Man(5)GlcNAc(2).::Homo sapiens (taxid: 9606) confident COG1331::Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] 97.53::8-113 PF01532::Glyco_hydro_47 100.00::3-285 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_1nxc_A_1::2-249,258-285 very confident psy3602 390 Q9BZQ6::ER degradation-enhancing alpha-mannosidase-like protein 3 ::Involved in endoplasmic reticulum-associated degradation (ERAD). Accelerates the glycoprotein ERAD by proteasomes. This process depends on mannose-trimming from the N-glycans. Seems to have alpha 1,2-mannosidase activity.::Homo sapiens (taxid: 9606) confident COG1331::Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] 97.75::7-238 PF01532::Glyco_hydro_47 100.00::37-389 GO:0031090::organelle membrane confident hh_1x9d_A_1::27-63,76-80,82-141,154-192,194-315,317-389 very confident psy8438 270 B2GUY0::Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase ::Involved in glycoprotein quality control targeting of misfolded glycoproteins for degradation. It primarily trims a single alpha-1,2-linked mannose residue from Man(9)GlcNAc(2) to produce Man(8)GlcNAc(2), but at high enzyme concentrations, as found in the ER quality control compartment (ERQC), it further trims the carbohydrates to Man(5-6)GlcNAc(2).::Rattus norvegicus (taxid: 10116) confident COG1331::Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] 91.06::151-270 PF01532::Glyco_hydro_47 100.00::1-270 GO:0044446::intracellular organelle part confident hh_1x9d_A_1::1-49,53-110,112-125,130-270 very confident psy7540 578 Q9EPS3::D-glucuronyl C5-epimerase ::Converts D-glucuronic acid residues adjacent to N-sulfate sugar residues to L-iduronic acids.::Mus musculus (taxid: 10090) confident COG1331::Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] 96.53::408-573 PF06662::C5-epim_C 100.00::138-331 GO:0005794::Golgi apparatus confident hh_1gxm_A_1::128-139,141-153,155-155,158-184,186-228,234-274,277-335 confident psy1561 285 Q9USS0::Nicotinamidase ::Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1335::PncA Amidases related to nicotinamidase [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::82-280 PF00857::Isochorismatase 100.00::6-275 GO:0008936::nicotinamidase activity confident hh_3v8e_A_1::6-28,83-121,124-136,143-272 very confident psy8942 340 Q9USS0::Nicotinamidase ::Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1335::PncA Amidases related to nicotinamidase [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::32-263 PF00857::Isochorismatase 100.00::37-258 GO:0008936::nicotinamidase activity confident hh_3v8e_A_1::36-55,62-105,108-117,121-122,126-255 very confident psy5092 291 Q6DJ03::Protein MEMO1 ::May control cell migration by relaying extracellular chemotactic signals to the microtubule cytoskeleton. Mediator of ERBB2 signaling.::Xenopus tropicalis (taxid: 8364) confident COG1355::Predicted dioxygenase [General function prediction only] 100.00::33-281 PF01875::Memo 100.00::37-282 GO:0005829::cytosol confident hh_3bcz_A_1::34-258,261-263,268-281 very confident psy17757 225 Q9SE95::FH protein interacting protein FIP2 ::May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Arabidopsis thaliana (taxid: 3702) confident COG1357::Pentapeptide repeats containing protein [Function unknown] 99.72::86-138 PF13599::Pentapeptide_4 99.39::171-201 GO:0051260::protein homooligomerization confident hh_2j8k_A_1::34-70,82-217 very confident psy6066 370 Q966C6::60S ribosomal protein L7a ::::Caenorhabditis elegans (taxid: 6239) confident COG1358::RPL8A Ribosomal protein HS6-type (S12/L30/L7a) [Translation, ribosomal structure and biogenesis] 99.67::230-345 PF01248::Ribosomal_L7Ae 99.04::262-322 GO:0022625::cytosolic large ribosomal subunit confident hh_2zkr_f_1::7-11,13-95,146-167,239-370 very confident psy16564 157 P25398::40S ribosomal protein S12 ::::Homo sapiens (taxid: 9606) very confident COG1358::RPL8A Ribosomal protein HS6-type (S12/L30/L7a) [Translation, ribosomal structure and biogenesis] 99.91::34-143 PF01248::Ribosomal_L7Ae 99.89::37-141 GO:0022627::cytosolic small ribosomal subunit very confident hh_3u5c_M_1::31-141 very confident psy6265 91 P62008::50S ribosomal protein L7Ae ::Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, box H/ACA, box C/D and box C'/D' sRNAs.::Pyrococcus abyssi (strain GE5 / Orsay) (taxid: 272844) confident COG1358::RPL8A Ribosomal protein HS6-type (S12/L30/L7a) [Translation, ribosomal structure and biogenesis] 99.90::2-72 PF01248::Ribosomal_L7Ae 99.82::2-75 GO:0031428::box C/D snoRNP complex confident hh_2lbw_A_1::2-87 very confident psy1295 137 P55770::NHP2-like protein 1 ::Binds to the 5'-stem-loop of U4 snRNA and may play a role in the late stage of spliceosome assembly. The protein undergoes a conformational change upon RNA-binding.::Rattus norvegicus (taxid: 10116) very confident COG1358::RPL8A Ribosomal protein HS6-type (S12/L30/L7a) [Translation, ribosomal structure and biogenesis] 99.94::18-134 PF01248::Ribosomal_L7Ae 99.89::29-120 GO:0071011::precatalytic spliceosome very confident hh_2jnb_A_1::13-137 very confident psy7458 139 Q9VXK0::Protein NipSnap ::::Drosophila melanogaster (taxid: 7227) confident COG1359::Uncharacterized conserved protein [Function unknown] 95.55::38-132 PF07978::NIPSNAP 99.97::40-137 GO:0042165::neurotransmitter binding confident hh_1vqy_A_1::36-139 very confident psy10709 348 Q5BJN5::Mitochondrial intermembrane space import and assembly protein 40 ::Required for the import and folding of small cysteine-containing proteins (small Tim) in the mitochondrial intermembrane space (IMS). Probably acts by forming a redox cycle with GFER/ERV1 that involves a disulfide relay system. Precursor proteins to be imported into the IMS are translocated in their reduced form into the mitochondria. The oxidized form of MIA40 forms a transient intermolecular disulfide bridge with the reduced precursor protein, resulting in oxidation of the precursor protein that now contains an intramolecular disulfide bond and is able to undergo folding in the IMS.::Rattus norvegicus (taxid: 10116) confident COG1369::POP5 RNase P/RNase MRP subunit POP5 [Translation, ribosomal structure and biogenesis] 98.15::135-200 PF01900::RNase_P_Rpp14 99.39::135-200 GO:0005758::mitochondrial intermembrane space confident hh_2k3j_A_1::202-315 very confident psy16496 245 Q15465::Sonic hedgehog protein ::Binds to the patched (PTC) receptor, which functions in association with smoothened (SMO), to activate the transcription of target genes. In the absence of SHH, PTC represses the constitutive signaling activity of SMO. Also regulates another target, the gli oncogene. Intercellular signal essential for a variety of patterning events during development: signal produced by the notochord that induces ventral cell fate in the neural tube and somites, and the polarizing signal for patterning of the anterior-posterior axis of the developing limb bud. Displays both floor plate- and motor neuron-inducing activity. The threshold concentration of N-product required for motor neuron induction is 5-fold lower than that required for floor plate induction.::Homo sapiens (taxid: 9606) confident COG1372::Intein/homing endonuclease [DNA replication, recombination, and repair] 97.61::169-223 PF01085::HH_signal 100.00::7-100 GO:0035264::multicellular organism growth confident hh_3k7i_B_1::7-106,108-114 very confident psy8680 180 A4QND5::60S ribosome subunit biogenesis protein NIP7 homolog ::Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.::Xenopus tropicalis (taxid: 8364) confident COG1374::NIP7 Protein involved in ribosomal biogenesis, contains PUA domain [Translation, ribosomal structure and biogenesis] 100.00::2-176 PF03657::UPF0113 100.00::1-174 GO:0005829::cytosol confident hh_1sqw_A_1::1-62,101-179 very confident psy8679 221 A4QND5::60S ribosome subunit biogenesis protein NIP7 homolog ::Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly.::Xenopus tropicalis (taxid: 8364) very confident COG1374::NIP7 Protein involved in ribosomal biogenesis, contains PUA domain [Translation, ribosomal structure and biogenesis] 100.00::56-218 PF03657::UPF0113 100.00::54-216 GO:0005829::cytosol confident hh_1sqw_A_1::55-220 very confident psy7686 243 Q8R0K9::Transcription factor E2F4 ::Transcription activator that binds DNA cooperatively with DP proteins through the E2 recognition site, 5'-TTTC[CG]CGC-3' found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The DRTF1/E2F complex functions in the control of cell-cycle progression from G1 to S phase. E2F-4 binds with high affinity to RBL1 and RBL2. In some instances, can also bind RB protein.::Mus musculus (taxid: 10090) portable COG1378::Predicted transcriptional regulators [Transcription] 92.26::21-75 PF02319::E2F_TDP 99.89::9-75 GO:0051726::regulation of cell cycle confident hh_2aze_B_1::86-165,169-179,182-192 very confident psy13667 144 Q9VTE5::Probable prefoldin subunit 2 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.::Drosophila melanogaster (taxid: 7227) confident COG1382::GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] 99.91::8-118 PF01920::Prefoldin_2 99.85::14-117 GO:0005634::nucleus confident hh_1fxk_A_1::11-113 confident psy15717 72 Q2TBR6::Prefoldin subunit 4 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.::Bos taurus (taxid: 9913) portable COG1382::GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] 99.02::4-68 PF01920::Prefoldin_2 99.49::3-64 GO:0005737::cytoplasm confident hh_1fxk_A_1::3-62 confident psy14557 338 Q9CWM4::Prefoldin subunit 1 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.::Mus musculus (taxid: 10090) confident COG1382::GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] 99.81::216-330 PF01920::Prefoldin_2 99.79::225-329 GO:0005737::cytoplasm confident hh_1v38_A_1::2-62 very confident psy14231 75 Q03958::Prefoldin subunit 6 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.::Mus musculus (taxid: 10090) confident COG1382::GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] 99.69::2-73 PF01920::Prefoldin_2 99.18::2-61 GO:0005829::cytosol confident hh_1fxk_A_1::2-58 confident psy14230 110 Q03958::Prefoldin subunit 6 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.::Mus musculus (taxid: 10090) confident COG1382::GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] 99.95::2-108 PF01920::Prefoldin_2 99.85::10-108 GO:0051087::chaperone binding confident hh_1fxk_A_1::7-108 very confident psy14232 112 no hit no match COG1382::GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] 99.79::2-69 PF01920::Prefoldin_2 99.25::10-79 GO:0051087::chaperone binding confident hh_1fxk_A_1::7-81 confident psy3275 114 P17704::40S ribosomal protein S17 ::::Drosophila melanogaster (taxid: 7227) very confident COG1383::RPS17A Ribosomal protein S17E [Translation, ribosomal structure and biogenesis] 99.95::52-112 PF00833::Ribosomal_S17e 99.95::52-111 GO:0022627::cytosolic small ribosomal subunit very confident hh_2xzm_V_1::1-57 very confident psy12513 159 P11019::V-type proton ATPase subunit E 1 ::Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Bos taurus (taxid: 9913) portable COG1390::NtpE Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion] 98.82::57-139 PF01991::vATP-synt_E 98.68::64-138 GO:0005774::vacuolar membrane confident hh_4efa_E_1::46-138 confident psy12510 236 P11019::V-type proton ATPase subunit E 1 ::Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Bos taurus (taxid: 9913) portable COG1390::NtpE Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion] 99.18::126-228 PF01991::vATP-synt_E 99.37::132-235 GO:0005774::vacuolar membrane confident hh_4efa_E_1::112-236 very confident psy12089 467 P54611::V-type proton ATPase subunit E ::Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) confident COG1390::NtpE Archaeal/vacuolar-type H+-ATPase subunit E [Energy production and conversion] 99.96::36-242 PF01991::vATP-synt_E 99.97::42-240 GO:0005829::cytosol confident hh_2dm9_A_2::254-298,310-352,355-402,408-415,420-463 very confident psy7193 136 Q9V7D2::V-type proton ATPase subunit D 1 ::Subunit of the peripheral V1 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.::Drosophila melanogaster (taxid: 7227) confident COG1394::NtpD Archaeal/vacuolar-type H+-ATPase subunit D [Energy production and conversion] 99.97::8-124 PF01813::ATP-synt_D 99.94::15-127 GO:0005774::vacuolar membrane confident hh_3aon_A_1::8-88,90-121,125-135 very confident psy12149 243 Q5RCS8::V-type proton ATPase subunit D ::Subunit of the peripheral V1 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.::Pongo abelii (taxid: 9601) very confident COG1394::NtpD Archaeal/vacuolar-type H+-ATPase subunit D [Energy production and conversion] 100.00::7-213 PF01813::ATP-synt_D 100.00::14-208 GO:0005829::cytosol very confident hh_3aon_A_1::7-125,129-211 very confident psy12586 309 Q05941::Neuronal acetylcholine receptor subunit alpha-7 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. The channel is blocked by alpha-bungarotoxin.::Rattus norvegicus (taxid: 10116) portable COG1394::NtpD Archaeal/vacuolar-type H+-ATPase subunit D [Energy production and conversion] 99.77::207-282 PF01813::ATP-synt_D 99.73::207-276 GO:0042221::response to chemical stimulus confident hh_1oed_A_1::112-185,187-203,207-217 very confident psy6526 696 Q9TT94::Acyl-CoA desaturase ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Bos taurus (taxid: 9913) portable COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::157-409 PF00089::Trypsin 99.84::451-685 GO:0032502::developmental process confident hh_2oq5_A_1::450-465,470-479,481-491,498-500,504-511,514-515,518-537,540-547,551-690 very confident psy13039 199 Q2KIA4::Stearoyl-CoA desaturase 5 ::Fatty acid delta(9)-desaturase that introduces a double bond in fatty acyl-coenzyme A at the delta 9 position.::Bos taurus (taxid: 9913) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 99.93::1-76 PF00487::FA_desaturase 94.09::10-62 GO:0005783::endoplasmic reticulum confident no hit no match psy408 132 Q2KIA4::Stearoyl-CoA desaturase 5 ::Fatty acid delta(9)-desaturase that introduces a double bond in fatty acyl-coenzyme A at the delta 9 position.::Bos taurus (taxid: 9913) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::1-132 PF00487::FA_desaturase 97.98::1-29 GO:0005783::endoplasmic reticulum confident no hit no match psy12870 417 P13516::Acyl-CoA desaturase 1 ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Mus musculus (taxid: 10090) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::51-376 PF00487::FA_desaturase 99.44::81-154 GO:0031410::cytoplasmic vesicle confident no hit no match psy13035 293 O00767::Acyl-CoA desaturase ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Homo sapiens (taxid: 9606) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::51-279 PF00487::FA_desaturase 99.05::85-147 GO:0055114::oxidation-reduction process confident no hit no match psy10539 109 O02858::Acyl-CoA desaturase (Fragment) ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Sus scrofa (taxid: 9823) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 99.95::1-75 PF00487::FA_desaturase 96.14::9-62 GO:0055114::oxidation-reduction process confident no hit no match psy13036 324 O02858::Acyl-CoA desaturase (Fragment) ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Sus scrofa (taxid: 9823) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::19-292 PF00487::FA_desaturase 99.57::52-122 GO:0055114::oxidation-reduction process confident no hit no match psy11084 277 P13516::Acyl-CoA desaturase 1 ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Mus musculus (taxid: 10090) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::47-277 PF00487::FA_desaturase 99.17::88-157 GO:0055114::oxidation-reduction process confident no hit no match psy16812 359 P13516::Acyl-CoA desaturase 1 ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Mus musculus (taxid: 10090) portable COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::3-342 PF00487::FA_desaturase 99.42::5-76 GO:0055114::oxidation-reduction process confident no hit no match psy10534 286 Q2KIA4::Stearoyl-CoA desaturase 5 ::Fatty acid delta(9)-desaturase that introduces a double bond in fatty acyl-coenzyme A at the delta 9 position.::Bos taurus (taxid: 9913) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::2-240 PF00487::FA_desaturase 99.32::7-67 GO:0055114::oxidation-reduction process confident no hit no match psy10541 152 Q2KIA4::Stearoyl-CoA desaturase 5 ::Fatty acid delta(9)-desaturase that introduces a double bond in fatty acyl-coenzyme A at the delta 9 position.::Bos taurus (taxid: 9913) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 100.00::1-148 PF00487::FA_desaturase 98.09::2-28 GO:0055114::oxidation-reduction process confident rp_1vt4_I_1::2-41,47-55,67-111,113-130 portable psy11080 90 P07308::Acyl-CoA desaturase 1 ::Terminal component of the liver microsomal stearyl-CoA desaturase system, that utilizes O(2) and electrons from reduced cytochrome b5 to catalyze the insertion of a double bond into a spectrum of fatty acyl-CoA substrates including palmitoyl-CoA and stearoyl-CoA.::Rattus norvegicus (taxid: 10116) confident COG1398::OLE1 Fatty-acid desaturase [Lipid metabolism] 99.84::1-54 no hit no match GO:0005783::endoplasmic reticulum confident no hit no match psy6932 150 Q3ZBG7::Signal recognition particle 19 kDa protein ::Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP.::Bos taurus (taxid: 9913) confident COG1400::SEC65 Signal recognition particle 19 kDa protein [Intracellular trafficking and secretion] 99.96::14-116 PF01922::SRP19 100.00::16-115 GO:0008312::7S RNA binding confident hh_1jid_A_1::1-120 very confident psy5372 586 P13134::Kexin ::Processing of precursors of alpha-factors and killer toxin.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1404::AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] 99.91::144-416 PF00082::Peptidase_S8 100.00::162-450 GO:0005615::extracellular space confident hh_1p8j_A_1::119-134,141-152,154-421,423-468,470-476,479-582 very confident psy357 132 Q03333::Neuroendocrine convertase 2 ::Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues.::Sus scrofa (taxid: 9823) confident COG1404::AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] 98.13::68-132 PF00082::Peptidase_S8 98.21::84-132 GO:0006508::proteolysis confident hh_1p8j_A_1::40-57,64-132 very confident psy15698 577 Q9WTZ3::Membrane-bound transcription factor site-1 protease ::Catalyzes the first step in the proteolytic activation of the sterol regulatory element-binding proteins (SREBPs). Other known substrates are BDNF and ATF6. Cleaves after hydrophobic or small residues, provided that Arg or Lys is in position P4. Cleaves known substrates after Arg-Ser-Val-Leu (SERBP-2), Arg-His-Leu-Leu (ATF6), Arg-Gly-Leu-Thr (BDNF) and its own propeptide after Arg-Arg-Leu-Leu.::Rattus norvegicus (taxid: 10116) confident COG1404::AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] 99.91::201-446 PF00082::Peptidase_S8 100.00::218-458 GO:0006629::lipid metabolic process confident hh_2qtw_B_1::206-266,269-317,320-348,350-381,394-417,420-447 very confident psy14141 698 P29144::Tripeptidyl-peptidase 2 ::Component of the proteolytic cascade acting downstream of the 26S proteasome in the ubiquitin-proteasome pathway. May be able to complement the 26S proteasome function to some extent under conditions in which the latter is inhibited.::Homo sapiens (taxid: 9606) confident COG1404::AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] 97.38::621-682 PF00082::Peptidase_S8 98.83::10-78 GO:0008240::tripeptidyl-peptidase activity confident hh_3lxu_X_1::361-548,551-597,600-637,639-684 very confident psy1075 624 Q9WTZ3::Membrane-bound transcription factor site-1 protease ::Catalyzes the first step in the proteolytic activation of the sterol regulatory element-binding proteins (SREBPs). Other known substrates are BDNF and ATF6. Cleaves after hydrophobic or small residues, provided that Arg or Lys is in position P4. Cleaves known substrates after Arg-Ser-Val-Leu (SERBP-2), Arg-His-Leu-Leu (ATF6), Arg-Gly-Leu-Thr (BDNF) and its own propeptide after Arg-Arg-Leu-Leu.::Rattus norvegicus (taxid: 10116) confident COG1404::AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] 98.11::140-206 PF00082::Peptidase_S8 99.26::141-206 GO:0042990::regulation of transcription factor import into nucleus confident hh_1sh7_A_1::84-165,171-188 very confident psy15973 266 P23188::Furin ::Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.::Mus musculus (taxid: 10090) confident COG1404::AprE Subtilisin-like serine proteases [Posttranslational modification, protein turnover, chaperones] 98.97::82-234 PF00082::Peptidase_S8 99.80::69-265 GO:0043043::peptide biosynthetic process confident hh_1p8j_A_1::54-217,221-265 very confident psy6534 309 P62916::Transcription initiation factor IIB ::General factor that plays a major role in the activation of eukaryotic genes transcribed by RNA polymerase II.::Rattus norvegicus (taxid: 10116) very confident COG1405::SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription] 100.00::6-290 PF00382::TFIIB 99.75::114-184 GO:0001047::core promoter binding very confident hh_1c9b_A_1::104-309 very confident psy1861 661 P62744::AP-2 complex subunit sigma ::Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein Transport via Transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but is itself unable to bind directly to membrane components. Clathrin-associated adaptor protein (AP) complexes which can bind directly to both the clathrin lattice and to the lipid and protein components of membranes are considered to be the major clathrin adaptors contributing the CCV formation. AP-2 also serves as a cargo receptor to selectively sort the membrane proteins involved in receptor-mediated endocytosis. AP-2 seems to play a role in the recycling of synaptic vesicle membranes from the presynaptic surface. AP-2 recognizes Y-X-X-[FILMV] (Y-X-X-Phi) and [ED]-X-X-X-L-[LI] endocytosis signal motifs within the cytosolic tails of transmembrane cargo molecules. AP-2 may also play a role in maintaining normal post-endocytic trafficking through the ARF6-regulated, non-clathrin pathway. The AP-2 alpha and AP-2 sigma subunits are thought to contribute to the recognition of the [ED]-X-X-X-L-[LI] motif.::Rattus norvegicus (taxid: 10116) very confident COG1405::SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription] 100.00::174-416 PF07741::BRF1 99.92::469-558 GO:0030122::AP-2 adaptor complex very confident hh_2vgl_S_1::2-54,113-177 very confident psy9484 407 Q24472::Retinoblastoma family protein ::Functions in cell cycle regulation. Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In follicle cells, the complex plays a central role in the site-specific DNA replication at the chorion loci. During development, the complex represses transcription of developmentally controlled E2F target genes.::Drosophila melanogaster (taxid: 7227) portable COG1405::SUA7 Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB [Transcription] 96.36::9-122 PF11934::DUF3452 100.00::65-206 GO:0043234::protein complex confident hh_4elj_A_1::10-59,72-101,103-104,108-147,149-149,159-207,212-224,235-261,290-300,313-319,327-380 very confident psy16143 388 Q04519::Sphingomyelin phosphodiesterase ::Converts sphingomyelin to ceramide. Also has phospholipase C activities toward 1,2-diacylglycerolphosphocholine and 1,2-diacylglycerolphosphoglycerol.::Mus musculus (taxid: 10090) portable COG1409::Icc Predicted phosphohydrolases [General function prediction only] 96.70::5-91 PF00149::Metallophos 97.39::29-90 GO:0005576::extracellular region confident hh_2nxf_A_1::28-78,80-95,98-101,107-140 confident psy15419 332 Q04519::Sphingomyelin phosphodiesterase ::Converts sphingomyelin to ceramide. Also has phospholipase C activities toward 1,2-diacylglycerolphosphocholine and 1,2-diacylglycerolphosphoglycerol.::Mus musculus (taxid: 10090) portable COG1409::Icc Predicted phosphohydrolases [General function prediction only] 97.91::55-145 PF00149::Metallophos 97.55::82-144 GO:0005576::extracellular region confident hh_2nxf_A_1::47-131,133-149,152-155,161-192 confident psy15259 257 Q04519::Sphingomyelin phosphodiesterase ::Converts sphingomyelin to ceramide. Also has phospholipase C activities toward 1,2-diacylglycerolphosphocholine and 1,2-diacylglycerolphosphoglycerol.::Mus musculus (taxid: 10090) portable COG1409::Icc Predicted phosphohydrolases [General function prediction only] 99.12::122-192 PF00149::Metallophos 99.02::135-191 GO:0005576::extracellular region confident hh_2nxf_A_1::64-86,109-115,118-134,136-156,159-173,175-175,177-192,196-197,211-253 confident psy2930 293 Q5RET5::Metallophosphoesterase 1 ::Metallophosphoesterase required for transport of GPI-anchor proteins from the endoplasmic reticulum to the Golgi. Acts in lipid remodeling steps of GPI-anchor maturation by mediating the removal of a side-chain ethanolamine-phosphate (EtNP) from the second Man (Man2) of the GPI intermediate, an essential step for efficient transport of GPI-anchor proteins.::Pongo abelii (taxid: 9601) confident COG1409::Icc Predicted phosphohydrolases [General function prediction only] 99.83::13-251 PF00149::Metallophos 99.79::13-250 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_2nxf_A_1::9-34,38-73,75-87,89-106,113-171,183-202,214-214,222-255,257-291 confident psy3003 106 Q9Y324::rRNA-processing protein FCF1 homolog ::Essential protein involved in pre-rRNA processing and 40S ribosomal subunit assembly.::Homo sapiens (taxid: 9606) confident COG1412::Uncharacterized proteins of PilT N-term./Vapc superfamily [General function prediction only] 99.95::4-100 PF04900::Fcf1 100.00::2-98 GO:0006364::rRNA processing confident hh_1o4w_A_1::7-34,37-44,46-47,49-49,51-62,64-80,82-92 very confident psy10052 500 Q5PPJ4::Deoxyhypusine hydroxylase ::Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L-lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.::Rattus norvegicus (taxid: 10116) confident COG1413::FOG: HEAT repeat [Energy production and conversion] 99.84::38-428 PF01602::Adaptin_N 99.62::6-431 GO:0055114::oxidation-reduction process confident hh_3ltm_A_1::32-81,84-131,157-169,172-233,236-252 very confident psy14015 318 P36179::Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit ::The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of the catalytic subunit and a variable regulatory B subunit.::Drosophila melanogaster (taxid: 7227) confident COG1413::FOG: HEAT repeat [Energy production and conversion] 99.14::14-264 PF01602::Adaptin_N 99.33::6-310 GO:0072686::mitotic spindle confident bp_1b3u_A_1::9-180,211-284 very confident psy10293 179 Q9UM00::Transmembrane and coiled-coil domain-containing protein 1 ::::Homo sapiens (taxid: 9606) very confident COG1422::Predicted membrane protein [Function unknown] 100.00::5-162 PF01956::DUF106 100.00::4-161 GO:0055120::striated muscle dense body very confident hh_3hd7_A_1::29-49 portable psy17239 115 P83094::Stromal interaction molecule homolog ::Plays a role in mediating Ca(2+) influx following depletion of intracellular Ca(2+) stores.::Drosophila melanogaster (taxid: 7227) confident COG1422::Predicted membrane protein [Function unknown] 92.23::11-78 PF10828::DUF2570 96.55::11-84 GO:0005783::endoplasmic reticulum confident hh_2dfs_A_1::35-85 portable psy6807 395 P91929::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Drosophila melanogaster (taxid: 7227) confident COG1428::Deoxynucleoside kinases [Nucleotide transport and metabolism] 99.97::69-294 PF01712::dNK 99.86::146-279 GO:0005811::lipid particle confident hh_2vp4_A_1::67-104,107-114,131-139,141-160,164-164,167-243,247-277,280-294 very confident psy16743 114 Q9R088::Thymidine kinase 2, mitochondrial ::Deoxyribonucleoside kinase that phosphorylates thymidine, deoxycytidine, and deoxyuridine. Also phosphorylates anti-viral and anti-cancer nucleoside analogs.::Mus musculus (taxid: 10090) portable COG1428::Deoxynucleoside kinases [Nucleotide transport and metabolism] 99.97::2-113 PF01712::dNK 100.00::7-111 GO:0009165::nucleotide biosynthetic process confident hh_2ocp_A_1::2-112 very confident psy2224 504 A6N7Y9::Piwi-like protein 1 ::Plays a central role during gametogenesis by repressing transposable elements and prevent their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons. Directly binds methylated piRNAs, a class of 24 to 30 nucleotide RNAs that are generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequence elements. Besides their function in transposable elements repression, piRNAs are probably involved in other processes during meiosis such as translation regulation.::Gallus gallus (taxid: 9031) portable COG1431::Argonaute homolog, implicated in RNA metabolism [Translation, ribosomal structure and biogenesis] 91.50::403-476 PF02170::PAZ 99.86::153-271 GO:0034584::piRNA binding confident hh_3qir_A_1::151-293 very confident psy11399 865 Q9UKV8::Protein argonaute-2 ::Required for RNA-mediated gene silencing (RNAi) by the RNA-induced silencing complex (RISC). The 'minimal RISC' appears to include EIF2C2/AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the mRNA specifically by EIF2C2/AGO2. Binding of RISC to a partially complementary mRNA results in silencing through inhibition of translation, and this is independent of endonuclease activity. May inhibit translation initiation by binding to the 7-methylguanosine cap, thereby preventing the recruitment of the translation initiation factor eIF4-E. May also inhibit translation initiation via interaction with EIF6, which itself binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit. The inhibition of translational initiation leads to the accumulation of the affected mRNA in cytoplasmic processing bodies (P-bodies), where mRNA degradation may subsequently occur. In some cases RISC-mediated translational repression is also observed for miRNAs that perfectly match the 3' untranslated region (3'-UTR). Can also up-regulate the translation of specific mRNAs under certain growth conditions. Binds to the AU element of the 3'-UTR of the TNF (TNF-alpha) mRNA and up-regulates translation under conditions of serum starvation. Also required for transcriptional gene silencing (TGS), in which short RNAs known as antigene RNAs or agRNAs direct the transcriptional repression of complementary promoter regions.::Homo sapiens (taxid: 9606) very confident COG1431::Argonaute homolog, implicated in RNA metabolism [Translation, ribosomal structure and biogenesis] 98.38::537-821 PF02171::Piwi 100.00::590-823 GO:0005634::nucleus very confident hh_4f3t_A_1::76-480,499-865 very confident psy11920 884 A8KBF3::Piwi-like protein 2 ::Plays a central role during gametogenesis by repressing transposable elements and prevent their mobilization, which is essential for the germline integrity. Plays an essential role in germ cell differentiation and meiosis, independently of the function in transposable elements repression. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons. Directly binds piRNAs, a class of 24 to 30 nucleotide RNAs that are generated by a Dicer-independent mechanism and are primarily derived from transposons and other repeated sequence elements. The piRNA process acts upstream of known mediators of DNA methylation. Besides their function in transposable elements repression, piRNAs are probably involved in other processes such as translation regulation.::Xenopus tropicalis (taxid: 8364) confident COG1431::Argonaute homolog, implicated in RNA metabolism [Translation, ribosomal structure and biogenesis] 99.57::569-884 PF02171::Piwi 100.00::568-870 GO:0034584::piRNA binding very confident hh_3qir_A_1::287-387,390-435 very confident psy6533 387 Q69VD5::Protein argonaute PNH1 ::Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity). Plays a role in the maintenance of the indeterminate state of the stem cells in the shoot apical meristem (SAM). Regulates leaf formation through vascular development and may be involved in determining the central domain of the leaf founder region.::Oryza sativa subsp. japonica (taxid: 39947) confident COG1431::Argonaute homolog, implicated in RNA metabolism [Translation, ribosomal structure and biogenesis] 98.35::142-354 PF02171::Piwi 100.00::138-357 GO:0035068::micro-ribonucleoprotein complex confident hh_4f3t_A_1::36-116,126-134,136-256,258-360 very confident psy8456 353 Q72XC1::Thymidine kinase ::::Bacillus cereus (strain ATCC 10987) (taxid: 222523) portable COG1435::Tdk Thymidine kinase [Nucleotide transport and metabolism] 100.00::10-151 PF00265::TK 100.00::10-149 GO:0006213::pyrimidine nucleoside metabolic process confident hh_1w4r_A_1::10-43,45-150 very confident psy6439 114 Q24583::V-type proton ATPase subunit F 1 ::Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) very confident COG1436::NtpG Archaeal/vacuolar-type H+-ATPase subunit F [Energy production and conversion] 99.87::9-113 PF01990::ATP-synt_F 99.93::12-114 GO:0005794::Golgi apparatus very confident hh_2i4r_A_1::2-34,42-42,47-102,104-110 very confident psy963 128 Q28029::V-type proton ATPase subunit F ::Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Bos taurus (taxid: 9913) confident COG1436::NtpG Archaeal/vacuolar-type H+-ATPase subunit F [Energy production and conversion] 99.89::6-122 PF01990::ATP-synt_F 99.94::9-120 GO:0051704::multi-organism process confident hh_2qai_A_1::7-28,42-85,94-108,110-122 very confident psy4197 124 Q7QGX9::Mediator of RNA polymerase II transcription subunit 18 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Anopheles gambiae (taxid: 7165) confident COG1437::CyaB Adenylate cyclase, class 2 (thermophilic) [Nucleotide transport and metabolism] 94.15::11-105 PF09637::Med18 99.94::3-118 GO:0016592::mediator complex confident hh_3c0t_A_1::5-114 very confident psy12603 391 Q8BW10::RNA-binding protein NOB1 ::May play a role in mRNA degradation.::Mus musculus (taxid: 10090) confident COG1439::Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module [General function prediction only] 100.00::6-284 PF08772::NOB1_Zn_bind 100.00::238-310 GO:0044763::single-organism cellular process confident hh_2con_A_1::233-309 very confident psy3471 227 Q9JLA3::UDP-glucose:glycoprotein glucosyltransferase 1 ::Recognizes glycoproteins with minor folding defects. Reglucosylates single N-glycans near the misfolded part of the protein, thus providing quality control for protein folding in the endoplasmic reticulum. Reglucosylated proteins are recognized by calreticulin for recycling to the endoplasmic reticulum and refolding or degradation.::Rattus norvegicus (taxid: 10116) confident COG1442::RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] 99.45::9-130 PF01501::Glyco_transf_8 99.65::5-149 GO:0005509::calcium ion binding confident hh_1g9r_A_1::9-44,54-95,99-117,119-150 confident psy2336 222 O08730::Glycogenin-1 ::Self-glucosylates, via an inter-subunit mechanism, to form an oligosaccharide primer that serves as substrate for glycogen synthase.::Rattus norvegicus (taxid: 10116) confident COG1442::RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] 99.92::7-181 PF01501::Glyco_transf_8 99.94::4-180 GO:0008466::glycogenin glucosyltransferase activity confident hh_1ll2_A_1::4-218 very confident psy7288 518 no hit no match COG1442::RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] 99.92::10-243 PF01501::Glyco_transf_8 99.96::10-242 GO:0008466::glycogenin glucosyltransferase activity confident hh_3u2u_A_1::4-169,173-173,180-191,198-201,207-265 very confident psy3847 664 Q6P7A1::Glycosyltransferase-like protein LARGE2 ::Glycosyltransferase which participates in glycosylation of alpha-dystroglycan. May carry out the synthesis of glycoprotein and glycosphingolipid sugar chains. Has a higher activity toward alpha-dystroglycan than LARGE.::Rattus norvegicus (taxid: 10116) confident COG1442::RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] 100.00::13-373 PF13896::Glyco_transf_49 100.00::478-664 GO:0016757::transferase activity, transferring glycosyl groups confident hh_3tzt_A_1::14-20,22-81,84-86,184-232,235-235,237-255,257-297,301-319,323-367,369-383 very confident psy18105 333 Q9H0A0::N-acetyltransferase 10 ::Has protein acetyltransferase activity in vitro. Can acetylate both histones and microtubules. Histone acetylation may regulate transcription and mitotic chromosome de-condensation. Activates telomerase activity by stimulating the transcription of TERT, and may also regulate telomerase function by affecting the balance of telomerase subunit assembly, disassembly, and localization. Acetylates alpha-tubulin, which may affect microtubule stability and cell division.::Homo sapiens (taxid: 9606) confident COG1444::Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] 100.00::5-329 PF08351::DUF1726 99.96::35-129 GO:0005634::nucleus confident hh_2zpa_A_1::29-90,94-133,135-139,148-151,169-173,178-197,212-213,255-279,284-321 very confident psy5132 204 Q7L266::Isoaspartyl peptidase/L-asparaginase ::Acts in asparagine catabolism. May be involved in astroglial production of L-aspartate, which can act as an excitatory neurotransmitter in some brain regions.::Homo sapiens (taxid: 9606) confident COG1446::Asparaginase [Amino acid transport and metabolism] 100.00::1-186 PF01112::Asparaginase_2 100.00::1-184 GO:0005737::cytoplasm confident hh_1apy_B_1::62-184 very confident psy207 109 P17174::Aspartate aminotransferase, cytoplasmic ::Plays a key role in amino acid metabolism.::Homo sapiens (taxid: 9606) confident COG1448::TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 99.94::22-109 PF00155::Aminotran_1_2 99.37::37-109 GO:0005829::cytosol confident hh_1ajs_A_1::37-58,60-108 very confident psy16707 420 P00508::Aspartate aminotransferase, mitochondrial ::Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. May facilitate cellular uptake of long-chain free fatty acids.::Gallus gallus (taxid: 9031) portable COG1448::TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 100.00::139-419 PF00155::Aminotran_1_2 99.74::161-415 GO:0043231::intracellular membrane-bounded organelle confident rp_7aat_A_1::299-420 very confident psy16706 142 P00508::Aspartate aminotransferase, mitochondrial ::Plays a key role in amino acid metabolism. Important for metabolite exchange between mitochondria and cytosol. May facilitate cellular uptake of long-chain free fatty acids.::Gallus gallus (taxid: 9031) confident COG1448::TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 100.00::1-141 PF00155::Aminotran_1_2 99.03::2-136 GO:0043234::protein complex confident hh_1ajs_A_1::2-7,14-123,125-141 very confident psy14428 583 P74861::Aromatic-amino-acid aminotransferase ::::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) confident COG1448::TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 100.00::145-582 PF00155::Aminotran_1_2 100.00::164-537 GO:0043650::dicarboxylic acid biosynthetic process confident hh_1ajs_A_1::147-254,256-441,484-535 very confident psy9326 125 P17174::Aspartate aminotransferase, cytoplasmic ::Plays a key role in amino acid metabolism.::Homo sapiens (taxid: 9606) confident COG1448::TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 100.00::6-125 PF00155::Aminotran_1_2 97.87::14-123 GO:0043679::axon terminus confident hh_1ajs_A_1::14-122 very confident psy6266 218 P33097::Aspartate aminotransferase, cytoplasmic ::::Bos taurus (taxid: 9913) confident COG1448::TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] 100.00::7-213 PF00155::Aminotran_1_2 99.90::8-200 GO:0043679::axon terminus confident hh_1ajs_A_1::5-66,68-125,127-187,190-199 very confident psy2427 660 Q28XT3::Probable hydroxyacid-oxoacid transhydrogenase, mitochondrial ::Catalyzes the cofactor-independent reversible oxidation of gamma-hydroxybutyrate (GHB) to succinic semialdehyde (SSA) coupled to reduction of 2-ketoglutarate (2-KG) to D-2-hydroxyglutarate (D-2-HG). L-3-hydroxybutyrate (L-3-OHB) is also a substrate for HOT when using 2-KG as hydrogen acceptor, resulting in the formation of D-2-HG.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG1454::EutG Alcohol dehydrogenase, class IV [Energy production and conversion] 100.00::26-657 PF00465::Fe-ADH 100.00::28-649 GO:0015993::molecular hydrogen transport confident hh_1rrm_A_1::23-27,29-133,135-143,149-231,251-256,473-492,495-533,547-633,635-659 very confident psy18023 151 P24043::Laminin subunit alpha-2 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Homo sapiens (taxid: 9606) portable COG1463::Ttg2C ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism] 96.28::68-125 PF00015::MCPsignal 97.27::63-106 GO:0015629::actin cytoskeleton confident hh_1c1g_A_1::64-99 portable psy4599 201 P43308::Translocon-associated protein subunit beta ::TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.::Homo sapiens (taxid: 9606) confident COG1470::Predicted membrane protein [Function unknown] 96.34::4-148 PF05753::TRAP_beta 100.00::1-191 GO:0005875::microtubule associated complex confident hh_2l0d_A_1::2-25,37-71 portable psy1800 81 P51405::40S ribosomal protein S4 ::::Dictyostelium discoideum (taxid: 44689) confident COG1471::RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] 99.91::1-68 PF00467::KOW 97.82::3-36 GO:0005615::extracellular space confident hh_3iz6_D_1::1-74 very confident psy8661 71 Q9USW5::40S ribosomal protein S4-B ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1471::RPS4A Ribosomal protein S4E [Translation, ribosomal structure and biogenesis] 100.00::1-70 PF08071::RS4NT 98.95::1-22 GO:0005774::vacuolar membrane confident hh_3iz6_D_1::1-70 very confident psy17062 520 O16810::Origin recognition complex subunit 1 ::Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.::Drosophila melanogaster (taxid: 7227) confident COG1474::CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] 99.96::128-387 PF05496::RuvB_N 99.87::130-361 GO:0006270::DNA replication initiation confident hh_2v1u_A_1::128-221,223-290,292-361 very confident psy200 490 Q54RM2::Origin recognition complex subunit 1 ::Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.::Dictyostelium discoideum (taxid: 44689) portable COG1474::CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] 100.00::194-478 PF05496::RuvB_N 99.87::194-422 GO:0043234::protein complex confident rp_2qby_A_1::195-353,356-422,428-448,453-482,484-490 very confident psy3261 342 P51398::28S ribosomal protein S29, mitochondrial ::Involved in mediating interferon-gamma-induced cell death.::Homo sapiens (taxid: 9606) confident COG1474::CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] 98.24::44-340 PF10236::DAP3 100.00::44-338 GO:0010259::multicellular organismal aging confident hh_1vt4_I_1::45-59,61-61,65-90 confident psy6501 174 Q9JMG1::Endothelial differentiation-related factor 1 ::Transcriptional coactivator stimulating NR5A1 and ligand-dependent NR1H3/LXRA and PPARG transcriptional activities. Enhances the DNA-binding activity of ATF1, ATF2, CREB1 and NR5A1. Regulates nitric oxid synthase activity probably by sequestering calmodulin in the cytoplasm. Might function in endothelial cells differentiation, hormone-induced cardiomyocytes hypertrophy and lipid metabolism.::Mus musculus (taxid: 10090) confident COG1476::Predicted transcriptional regulators [Transcription] 99.64::36-93 PF12844::HTH_19 99.72::34-93 GO:0005730::nucleolus confident rp_2jvl_A_1::2-89 very confident psy12637 270 P29952::Mannose-6-phosphate isomerase ::Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG1482::ManA Phosphomannose isomerase [Carbohydrate transport and metabolism] 100.00::1-261 PF01238::PMI_typeI 100.00::1-265 GO:0005737::cytoplasm confident hh_2wfp_A_1::1-14,18-30,34-57,59-84,86-165,171-237,239-262 very confident psy12635 198 P29952::Mannose-6-phosphate isomerase ::Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG1482::ManA Phosphomannose isomerase [Carbohydrate transport and metabolism] 100.00::1-186 PF01238::PMI_typeI 100.00::1-186 GO:0005737::cytoplasm confident hh_2wfp_A_1::1-15,19-29,33-84,86-186 very confident psy318 438 O42895::Uncharacterized protein C115.02c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1485::Predicted ATPase [General function prediction only] 100.00::8-415 PF03969::AFG1_ATPase 100.00::9-416 GO:0005739::mitochondrion confident hh_2z4s_A_1::65-108,112-116,169-172,174-226 confident psy15544 125 Q6P3H4::Nicotinate phosphoribosyltransferase ::Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).::Danio rerio (taxid: 7955) confident COG1488::PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] 99.96::7-119 PF02749::QRPTase_N 96.94::63-105 GO:0005794::Golgi apparatus confident hh_2i1o_A_1::12-29,61-61,63-119 very confident psy15542 180 Q9VQX4::Nicotinate phosphoribosyltransferase ::Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).::Drosophila melanogaster (taxid: 7227) confident COG1488::PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] 99.91::51-158 PF04095::NAPRTase 99.86::50-158 GO:0005794::Golgi apparatus confident hh_2f7f_A_1::49-69,71-167 very confident psy13791 90 Q9VQX4::Nicotinate phosphoribosyltransferase ::Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).::Drosophila melanogaster (taxid: 7227) confident COG1488::PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] 99.95::2-85 PF04095::NAPRTase 99.82::19-81 GO:0005794::Golgi apparatus confident hh_2f7f_A_1::1-16,18-86 very confident psy15543 163 Q9VQX4::Nicotinate phosphoribosyltransferase ::Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).::Drosophila melanogaster (taxid: 7227) confident COG1488::PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] 98.06::14-114 PF04095::NAPRTase 96.29::15-53 GO:0005794::Golgi apparatus confident hh_2f7f_A_1::13-25,27-72,74-135,140-155 very confident psy13801 88 Q6P3H4::Nicotinate phosphoribosyltransferase ::Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN).::Danio rerio (taxid: 7955) confident COG1488::PncB Nicotinic acid phosphoribosyltransferase [Coenzyme metabolism] 99.64::20-86 no hit no match GO:0005794::Golgi apparatus confident hh_2f7f_A_1::22-86 very confident psy11634 178 Q9DD18::D-tyrosyl-tRNA(Tyr) deacylase 1 ::Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine.::Mus musculus (taxid: 10090) confident COG1490::Dtd D-Tyr-tRNAtyr deacylase [Translation, ribosomal structure and biogenesis] 100.00::18-163 PF02580::Tyr_Deacylase 100.00::19-163 GO:0005730::nucleolus confident hh_2okv_A_1::18-168 very confident psy11166 1746 Q8WWY3::U4/U6 small nuclear ribonucleoprotein Prp31 ::Involved in pre-mRNA splicing. Required for U4/U6.U5 tri-snRNP formation.::Homo sapiens (taxid: 9606) confident COG1498::SIK1 Protein implicated in ribosomal biogenesis, Nop56p homolog [Translation, ribosomal structure and biogenesis] 100.00::1218-1539 PF01798::Nop 100.00::1321-1497 GO:0015030::Cajal body confident hh_2ozb_B_1::1214-1373,1387-1433,1449-1496 very confident psy10021 716 Q6BIX6::Nucleolar protein 58 ::Required for pre-18S rRNA processing. May bind microtubules.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) confident COG1498::SIK1 Protein implicated in ribosomal biogenesis, Nop56p homolog [Translation, ribosomal structure and biogenesis] 100.00::387-714 PF01798::Nop 100.00::570-714 GO:0032040::small-subunit processome confident hh_3gqu_A_1::583-632,657-714 very confident psy1329 465 Q5RK30::Ribosome maturation protein SBDS ::Required for the assembly of mature ribosomes and ribosome biogenesis. Together with EFTUD1, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Required for normal levels of protein synthesis. May play a role in cellular stress resistance. May play a role in cellular response to DNA damage. May play a role in cell proliferation.::Rattus norvegicus (taxid: 10116) confident COG1500::Predicted exosome subunit [Translation, ribosomal structure and biogenesis] 100.00::102-382 PF09377::SBDS_C 100.00::245-369 GO:0008017::microtubule binding confident hh_2kdo_A_1::92-156,203-316,319-346,348-390 very confident psy1332 103 Q5RK30::Ribosome maturation protein SBDS ::Required for the assembly of mature ribosomes and ribosome biogenesis. Together with EFTUD1, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Required for normal levels of protein synthesis. May play a role in cellular stress resistance. May play a role in cellular response to DNA damage. May play a role in cell proliferation.::Rattus norvegicus (taxid: 10116) confident COG1500::Predicted exosome subunit [Translation, ribosomal structure and biogenesis] 99.82::2-93 PF09377::SBDS_C 99.91::2-80 GO:0044464::cell part confident hh_2kdo_A_1::2-27,30-57,59-103 very confident psy6580 490 Q6P7A9::Lysosomal alpha-glucosidase ::Essential for the degradation of glygogen to glucose in lysosomes.::Rattus norvegicus (taxid: 10116) portable COG1501::Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] 100.00::254-489 PF01055::Glyco_hydro_31 99.97::352-489 GO:0005576::extracellular region confident hh_3l4y_A_1::114-118,120-162,164-245,247-489 very confident psy11532 260 Q94502::Neutral alpha-glucosidase AB ::Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from N-linked oligosaccharides on newly synthesized glycoproteins.::Dictyostelium discoideum (taxid: 44689) portable COG1501::Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] 100.00::102-260 PF01055::Glyco_hydro_31 100.00::106-260 GO:0005576::extracellular region confident hh_3nsx_A_1::106-149,152-231,234-248,250-260 very confident psy11534 81 Q94502::Neutral alpha-glucosidase AB ::Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from N-linked oligosaccharides on newly synthesized glycoproteins.::Dictyostelium discoideum (taxid: 44689) confident COG1501::Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] 99.94::1-79 PF01055::Glyco_hydro_31 99.90::2-80 GO:0071944::cell periphery confident rp_2g3m_A_1::1-16,19-63 very confident psy11533 92 Q14697::Neutral alpha-glucosidase AB ::Cleaves sequentially the 2 innermost alpha-1,3-linked glucose residues from the Glc(2)Man(9)GlcNAc(2) oligosaccharide precursor of immature glycoproteins.::Homo sapiens (taxid: 9606) confident COG1501::Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] 98.23::2-53 PF13802::Gal_mutarotas_2 99.53::2-49 GO:0050896::response to stimulus confident hh_3lpp_A_1::2-11,14-51 very confident psy1966 59 Q28DT3::Mitochondrial cardiolipin hydrolase ::Cardiolipin hydrolase present at the mitochondrial outer membrane required both for mitochondrial fusion and piRNA metabolic process. Acts by catalyzing the hydrolysis of cardiolipin (diphosphatidylglycerol) to form phosphatidate (phosphatidic acid or PA) at the mitochondrial outer membrane surface, promoting mitochondrial fusion. The production of phosphatidate also regulates the piRNA metabolic process by promoting recruitment and/or activation of components of the meiotic nuage, also named P granule, a critical step for primary biogenesis of piRNAs. Required during spermatogenesis to repress transposable elements and prevent their mobilization via its role in the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi proteins and govern the methylation and subsequent repression of transposons.::Xenopus tropicalis (taxid: 8364) confident COG1502::Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] 99.60::2-58 PF13091::PLDc_2 99.54::4-57 GO:0035755::cardiolipin hydrolase activity confident hh_4gel_A_1::3-58 very confident psy702 308 P25578::CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ::Essential for the viability of mitochondrial petite mutant. Catalyzes the committed step to the synthesis of the acidic phospholipids.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG1502::Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] 99.88::42-307 PF13091::PLDc_2 98.84::189-307 GO:0043231::intracellular membrane-bounded organelle confident hh_3hsi_A_1::7-20,22-28,40-86,88-101,108-120,123-129,131-145,148-149,152-155,158-158,162-179,181-195,198-273,276-288,295-307 very confident psy9095 203 Q9VPH7::Eukaryotic peptide chain release factor subunit 1 ::Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.::Drosophila melanogaster (taxid: 7227) very confident COG1503::eRF1 Peptide chain release factor 1 (eRF1) [Translation, ribosomal structure and biogenesis] 100.00::5-202 PF03464::eRF1_2 99.97::67-199 GO:0005829::cytosol confident hh_1dt9_A_1::9-30,33-202 very confident psy9255 127 Q9VPH7::Eukaryotic peptide chain release factor subunit 1 ::Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.::Drosophila melanogaster (taxid: 7227) very confident COG1503::eRF1 Peptide chain release factor 1 (eRF1) [Translation, ribosomal structure and biogenesis] 99.75::16-120 PF03465::eRF1_3 99.53::37-90 GO:0005829::cytosol confident hh_1dt9_A_1::17-119 very confident psy9094 185 Q9VPH7::Eukaryotic peptide chain release factor subunit 1 ::Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.::Drosophila melanogaster (taxid: 7227) confident COG1503::eRF1 Peptide chain release factor 1 (eRF1) [Translation, ribosomal structure and biogenesis] 100.00::2-185 PF03465::eRF1_3 99.96::55-185 GO:0006479::protein methylation confident hh_1dt9_A_1::2-185 very confident psy14549 117 B6HFS8::Probable dipeptidyl-aminopeptidase B ::Type IV dipeptidyl-peptidase which removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.::Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) (taxid: 500485) portable COG1506::DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] 99.87::1-116 PF00326::Peptidase_S9 99.88::13-116 GO:0005576::extracellular region confident hh_1z68_A_1::1-69,71-98,100-116 very confident psy463 790 Q12884::Seprase ::In association with DPP4 is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May have a role in tissue remodeling during development and wound healing, and may contribute to invasiveness in malignant cancers.::Homo sapiens (taxid: 9606) confident COG1506::DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] 100.00::246-790 PF00326::Peptidase_S9 99.95::521-790 GO:0005576::extracellular region confident hh_1xfd_A_1::7-23,25-26,28-30,33-46,53-107,111-128,143-154,161-183,185-216,222-229,231-232,243-291,293-316,320-325,328-343,347-394,396-406,411-480,482-494,497-576,578-607,609-637,640-643,709-723,725-790 very confident psy7765 77 P14740::Dipeptidyl peptidase 4 ::Cell surface glycoprotein receptor involved in the costimulatory signal essential for T-cell receptor (TCR)-mediated T-cell activation. Acts as a positive regulator of T-cell coactivation, by binding at least ADA, CAV1, IGF2R, and PTPRC. Its binding to CAV1 and CARD11 induces T-cell proliferation and NF-kappa-B activation in a T-cell receptor/CD3-dependent manner. Its interaction with ADA also regulates lymphocyte-epithelial cell adhesion. In association with FAP is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May be involved in the promotion of lymphatic endothelial cells adhesion, migration and tube formation. When overexpressed, enhanced cell proliferation, a process inhibited by GPC3. Acts also as a serine exopeptidase with a dipeptidyl peptidase activity that regulates various physiological processes by cleaving peptides in the circulation, including many chemokines, mitogenic growth factors, neuropeptides and peptide hormones (By similarity). Removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline.::Rattus norvegicus (taxid: 10116) confident COG1506::DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] 99.45::2-76 PF00326::Peptidase_S9 99.36::15-76 GO:0005794::Golgi apparatus confident hh_1z68_A_1::2-38,40-76 very confident psy472 68 Q12884::Seprase ::In association with DPP4 is involved in the pericellular proteolysis of the extracellular matrix (ECM), the migration and invasion of endothelial cells into the ECM. May have a role in tissue remodeling during development and wound healing, and may contribute to invasiveness in malignant cancers.::Homo sapiens (taxid: 9606) confident COG1506::DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] 99.64::9-68 PF00326::Peptidase_S9 99.64::7-68 GO:0008239::dipeptidyl-peptidase activity confident hh_1z68_A_1::2-68 very confident psy3845 167 P80035::Gastric triacylglycerol lipase ::::Canis familiaris (taxid: 9615) portable COG1506::DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] 95.62::81-166 PF00561::Abhydrolase_1 97.65::81-152 GO:0043229::intracellular organelle confident hh_1k8q_A_1::44-54,57-129,132-165 very confident psy4394 286 Q5ZJX1::Abhydrolase domain-containing protein FAM108C1 ::::Gallus gallus (taxid: 9031) very confident COG1506::DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism] 99.93::60-286 PF12695::Abhydrolase_5 99.88::93-286 GO:0071944::cell periphery confident hh_3cn9_A_1::88-160,162-206,218-218,241-283,285-286 very confident psy16584 202 Q9BQ65::Putative U6 snRNA phosphodiesterase ::::Homo sapiens (taxid: 9606) confident COG1514::LigT 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis] 99.91::22-154 PF09749::HVSL 100.00::1-201 GO:0005634::nucleus confident bp_4h7w_A_1::13-52,54-167,172-201 confident psy16608 202 Q9BQ65::Putative U6 snRNA phosphodiesterase ::::Homo sapiens (taxid: 9606) confident COG1514::LigT 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis] 99.91::22-154 PF09749::HVSL 100.00::1-201 GO:0005634::nucleus confident bp_4h7w_A_1::13-52,54-167,172-201 confident psy2081 380 Q9D8Z1::Activating signal cointegrator 1 complex subunit 1 ::Enhances NF-kappa-B, SRF and AP1 transactivation.::Mus musculus (taxid: 10090) confident COG1514::LigT 2'-5' RNA ligase [Translation, ribosomal structure and biogenesis] 99.96::165-380 PF10469::AKAP7_NLS 100.00::165-380 GO:0003723::RNA binding confident hh_1vig_A_1::91-140,142-156 confident psy15555 488 Q54DM9::GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase ::::Dictyostelium discoideum (taxid: 44689) confident COG1519::KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] 100.00::55-479 PF00534::Glycos_transf_1 99.91::285-460 GO:0005789::endoplasmic reticulum membrane confident hh_3c48_A_1::49-83,86-100,109-109,111-117,119-143,147-195,217-318,324-337,340-412,414-419,424-444,446-487 very confident psy2153 325 Q58A65::C-Jun-amino-terminal kinase-interacting protein 4 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module.::Mus musculus (taxid: 10090) confident COG1520::FOG: WD40-like repeat [Function unknown] 94.25::3-143 PF13360::PQQ_2 96.46::5-142 GO:0008432::JUN kinase binding confident hh_2ymu_A_2::15-43,52-98,102-129,131-139 confident psy16020 151 Q58A65::C-Jun-amino-terminal kinase-interacting protein 4 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module.::Mus musculus (taxid: 10090) confident COG1520::FOG: WD40-like repeat [Function unknown] 97.40::3-145 PF13360::PQQ_2 98.43::3-145 GO:0008432::JUN kinase binding confident hh_1nr0_A_1::16-44,52-102,106-144 confident psy16019 121 Q9GQF1::JNK-interacting protein 3 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK-signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins. Syd is required for efficient kinesin-I mediated axonal transport.::Drosophila melanogaster (taxid: 7227) confident COG1520::FOG: WD40-like repeat [Function unknown] 95.83::5-118 PF14783::BBS2_Mid 98.17::4-102 GO:0090074::negative regulation of protein homodimerization activity confident hh_3odt_A_2::5-21,23-23,27-62,71-74,76-119 confident psy11008 96 C3Y431::DDRGK domain-containing protein 1 ::::Branchiostoma floridae (taxid: 7739) confident COG1522::Lrp Transcriptional regulators [Transcription] 95.25::2-56 PF09756::DDRGK 100.00::1-88 GO:0005783::endoplasmic reticulum confident hh_1wi9_A_1::1-48 very confident psy4034 221 Q4ILH3::GPI ethanolamine phosphate transferase 1 ::Ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers ethanolamine phosphate to the first alpha-1,4-linked mannose of the glycosylphosphatidylinositol precursor of GPI-anchor.::Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533) portable COG1524::Uncharacterized proteins of the AP superfamily [General function prediction only] 99.94::10-220 PF01663::Phosphodiest 99.93::46-215 GO:0005783::endoplasmic reticulum confident hh_3nkq_A_1::40-63,68-78,81-196,198-216 very confident psy4035 121 Q4ILH3::GPI ethanolamine phosphate transferase 1 ::Ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers ethanolamine phosphate to the first alpha-1,4-linked mannose of the glycosylphosphatidylinositol precursor of GPI-anchor.::Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533) portable COG1524::Uncharacterized proteins of the AP superfamily [General function prediction only] 99.55::6-118 PF01663::Phosphodiest 97.69::46-114 GO:0043231::intracellular membrane-bounded organelle confident hh_3nkq_A_1::43-63,68-78,81-112 confident psy16181 480 Q7KZF4::Staphylococcal nuclease domain-containing protein 1 ::Functions as a bridging factor between STAT6 and the basal transcription factor. Plays a role in PIM1 regulation of MYB activity. Functions as a transcriptional coactivator for the Epstein-Barr virus nuclear antigen 2 (EBNA2).::Homo sapiens (taxid: 9606) portable COG1525::Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair] 99.80::237-365 PF00565::SNase 99.84::262-364 GO:0043229::intracellular organelle confident hh_3bdl_A_1::9-30,33-102,168-303,306-316,319-461,468-477 very confident psy12609 93 Q5R6I1::V-type proton ATPase subunit d 1 ::Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. May play a role in coupling of proton transport and ATP hydrolysis.::Pongo abelii (taxid: 9601) confident COG1527::NtpC Archaeal/vacuolar-type H+-ATPase subunit C [Energy production and conversion] 99.24::29-92 PF01992::vATP-synt_AC39 98.72::30-90 GO:0043679::axon terminus confident hh_1v9m_A_1::15-23,28-87 confident psy12607 175 Q9W4P5::V-type proton ATPase subunit d 1 ::Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.::Drosophila melanogaster (taxid: 7227) very confident COG1527::NtpC Archaeal/vacuolar-type H+-ATPase subunit C [Energy production and conversion] 99.97::4-173 PF01992::vATP-synt_AC39 99.91::4-174 GO:0043679::axon terminus confident hh_1v9m_A_1::3-23,28-87,90-92,94-113,115-131,134-163,167-174 confident psy15457 71 P19976::Ferritin-1, chloroplastic ::Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation.::Glycine max (taxid: 3847) confident COG1528::Ftn Ferritin-like protein [Inorganic ion transport and metabolism] 99.78::2-57 PF00210::Ferritin 99.19::2-57 GO:0005794::Golgi apparatus confident hh_3a68_A_1::2-57 very confident psy10513 239 P09528::Ferritin heavy chain ::Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.::Mus musculus (taxid: 10090) confident COG1528::Ftn Ferritin-like protein [Inorganic ion transport and metabolism] 100.00::69-230 PF00210::Ferritin 99.94::75-216 GO:0005829::cytosol confident hh_1rcd_A_1::63-193,195-227 very confident psy6334 63 P09528::Ferritin heavy chain ::Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.::Mus musculus (taxid: 10090) portable COG1528::Ftn Ferritin-like protein [Inorganic ion transport and metabolism] 97.92::2-62 PF00210::Ferritin 98.41::2-48 GO:0009570::chloroplast stroma confident hh_3a68_A_1::2-62 very confident psy12315 120 P09528::Ferritin heavy chain ::Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.::Mus musculus (taxid: 10090) confident COG1528::Ftn Ferritin-like protein [Inorganic ion transport and metabolism] 100.00::10-118 PF00210::Ferritin 99.83::15-118 GO:0048147::negative regulation of fibroblast proliferation confident hh_3a68_A_1::3-118 very confident psy15458 176 P09528::Ferritin heavy chain ::Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Has ferroxidase activity. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. Also plays a role in delivery of iron to cells. Mediates iron uptake in capsule cells of the developing kidney.::Mus musculus (taxid: 10090) confident COG1528::Ftn Ferritin-like protein [Inorganic ion transport and metabolism] 100.00::1-175 PF00210::Ferritin 99.94::6-159 GO:0055114::oxidation-reduction process confident hh_1z6o_M_1::1-48,50-60,62-115,120-122,126-176 very confident psy14045 287 Q00519::Xanthine dehydrogenase/oxidase ::Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species.::Mus musculus (taxid: 10090) confident COG1529::CoxL Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion] 100.00::9-250 PF02738::Ald_Xan_dh_C2 100.00::11-178 GO:0055114::oxidation-reduction process confident hh_1dgj_A_1::11-16,18-51,54-59,61-62,65-67,69-84,86-154,159-187,189-220,232-250 very confident psy17307 342 Q58DV0::Protein pelota homolog ::Required for normal chromosome segregation during cell division and genomic stability (By similarity). May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs. May have ribonuclease activity.::Bos taurus (taxid: 9913) confident COG1537::PelA Predicted RNA-binding proteins [General function prediction only] 100.00::1-341 PF03463::eRF1_1 100.00::1-195 GO:0005737::cytoplasm confident hh_3mca_B_1::1-8,10-59,123-341 very confident psy14161 91 Q9BRX2::Protein pelota homolog ::Required for normal chromosome segregation during cell division and genomic stability (By similarity). May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs. May have ribonuclease activity.::Homo sapiens (taxid: 9606) confident COG1537::PelA Predicted RNA-binding proteins [General function prediction only] 99.96::1-91 PF03463::eRF1_1 99.95::1-90 GO:0005737::cytoplasm confident hh_3mca_B_1::1-8,10-90 very confident psy6196 146 P48612::Protein pelota ::Required prior to the first meiotic division for spindle formation and nuclear envelope breakdown during spermatogenesis. It is also required for normal eye patterning and for mitotic divisions in the ovary. Required for ovarian germ line stem cell self-renewal. May play a role in regulating translation. May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs. May have ribonuclease activity.::Drosophila melanogaster (taxid: 7227) confident COG1537::PelA Predicted RNA-binding proteins [General function prediction only] 99.97::27-135 PF03463::eRF1_1 99.76::33-92 GO:0005829::cytosol confident hh_3mca_B_1::27-135 very confident psy14162 90 P48612::Protein pelota ::Required prior to the first meiotic division for spindle formation and nuclear envelope breakdown during spermatogenesis. It is also required for normal eye patterning and for mitotic divisions in the ovary. Required for ovarian germ line stem cell self-renewal. May play a role in regulating translation. May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs. May have ribonuclease activity.::Drosophila melanogaster (taxid: 7227) confident COG1537::PelA Predicted RNA-binding proteins [General function prediction only] 98.77::25-72 PF03464::eRF1_2 99.72::10-89 GO:0005737::cytoplasm confident hh_3mca_B_1::9-76,78-90 very confident psy16241 186 Q9R0M5::Thiamin pyrophosphokinase 1 ::Catalyzes the phosphorylation of thiamine to thiamine pyrophosphate. Can also catalyze the phosphorylation of pyrithiamine to pyrithiamine pyrophosphate.::Mus musculus (taxid: 10090) confident COG1564::THI80 Thiamine pyrophosphokinase [Coenzyme metabolism] 100.00::2-183 PF04263::TPK_catalytic 100.00::1-112 GO:0005829::cytosol confident hh_3lm8_A_1::2-16,26-74,76-121,124-133,138-183 very confident psy14930 308 Q9Y5Z9::UbiA prenyltransferase domain-containing protein 1 ::Prenyltransferase that mediates the formation of menaquinone-4 (MK-4), a vitamin K2 isoform present at high concentrations in the brain, kidney and pancreas. Mediates the conversion of phylloquinone (PK) into menaquinone-4 (MK-4), probably by cleaving the side chain of phylloquinone (PK) to release 2-methyl-1,4-naphthoquinone (menadione; K3) and then prenylating it with geranylgeranyl pyrophosphate (GGPP) to form MK-4.::Homo sapiens (taxid: 9606) very confident COG1575::MenA 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism] 100.00::18-307 PF01040::UbiA 99.97::32-236 GO:0005634::nucleus very confident no hit no match psy11662 346 Q5R5F8::Pantothenate kinase 4 ::Plays a role in the physiological regulation of the intracellular CoA concentration.::Pongo abelii (taxid: 9601) portable COG1578::Uncharacterized conserved protein [Function unknown] 100.00::64-346 PF01937::DUF89 100.00::16-344 GO:0005737::cytoplasm confident hh_1xfi_A_1::8-31,33-37,64-87,97-144,149-193,195-262,264-346 very confident psy21 288 P08928::Lamin Dm0 ::Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin.::Drosophila melanogaster (taxid: 7227) portable COG1579::Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] 94.86::184-281 PF00038::Filament 99.75::163-284 GO:0005635::nuclear envelope confident hh_1ifr_A_1::69-138,140-177 very confident psy13152 61 Q27249::Tropomyosin isoforms c/e ::Tropomyosin, in association with the troponin complex, plays a central role in the calcium dependent regulation of muscle contraction. Involved in muscle actin filament organization and muscle arm extension and morphology. Also has a role in male mating behavior by regulating the copulatory spicules. Binds to F-actin.::Caenorhabditis elegans (taxid: 6239) confident COG1579::Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] 91.87::2-57 PF00261::Tropomyosin 99.04::3-59 GO:0031941::filamentous actin confident hh_2b9c_A_1::17-59 very confident psy9275 284 Q9Y6D9::Mitotic spindle assembly checkpoint protein MAD1 ::Component of the spindle-assembly checkpoint that prevents the onset of anaphase until all chromosomes are properly aligned at the metaphase plate. May recruit MAD2L1 to unattached kinetochores. Has a role in the correct positioning of the septum. Required for anchoring MAD2L1 to the nuclear periphery. Binds to the TERT promoter and represses telomerase expression, possibly by interfering with MYC binding.::Homo sapiens (taxid: 9606) portable COG1579::Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] 92.17::139-233 PF05557::MAD 100.00::52-274 GO:0015629::actin cytoskeleton confident hh_4dzo_A_1::161-276 very confident psy10797 517 Q9VRP9::E3 ubiquitin-protein ligase Bre1 ::E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-117' of histone H2B. H2B 'Lys-117' ubiquitination gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation. It thereby plays a central role in histone code and gene regulation. Required for the expression of Notch target genes in development by affecting the levels of Su(H) in imaginal disk cells and stimulating the Su(H)-mediated transcription of Notch-specific genes.::Drosophila melanogaster (taxid: 7227) confident COG1579::Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] 98.46::307-464 PF08647::BRE1 99.72::326-421 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2ocy_A_1::299-328,340-427 confident psy14403 168 Q8BKE9::Intraflagellar transport protein 74 homolog ::::Mus musculus (taxid: 10090) portable COG1579::Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] 94.38::65-151 PF10146::zf-C4H2 96.17::37-146 GO:0043229::intracellular organelle confident hh_1i84_S_2::48-56 confident psy5576 156 P10716::C-type lectin domain family 4 member F ::Receptor with an affinity for galactose and fucose. Could be involved in endocytosis.::Rattus norvegicus (taxid: 10116) portable COG1579::Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] 98.42::11-123 PF12718::Tropomyosin_1 98.43::7-147 GO:0043234::protein complex confident hh_1i84_S_1::10-47 confident psy4748 136 Q791N7::DNA-directed RNA polymerase I subunit RPA12 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase I which synthesizes ribosomal RNA precursors.::Mus musculus (taxid: 10090) confident COG1594::RPB9 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription] 99.96::10-136 PF01096::TFIIS_C 99.78::103-136 GO:0005736::DNA-directed RNA polymerase I complex confident hh_3h0g_I_1::10-44,68-71,77-136 very confident psy8689 72 O13896::DNA-directed RNA polymerase III subunit RPC10 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1594::RPB9 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription] 99.85::22-72 PF01096::TFIIS_C 99.90::31-71 GO:0005829::cytosol confident hh_3qt1_I_1::14-63,66-72 very confident psy996 221 P52652::Putative transcription elongation factor S-II ::Necessary for efficient RNA polymerase II transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by S-II allows the resumption of elongation from the new 3'-terminus.::Caenorhabditis elegans (taxid: 6239) confident COG1594::RPB9 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS [Transcription] 99.28::183-219 PF07500::TFIIS_M 99.91::49-176 GO:0051254::positive regulation of RNA metabolic process confident hh_3ndq_A_1::37-43,46-139,153-158 very confident psy16024 316 P20192::Diacylglycerol kinase alpha ::Upon cell stimulation converts the second messenger diacylglycerol into phosphatidate, initiating the resynthesis of phosphatidylinositols and attenuating protein kinase C activity.::Sus scrofa (taxid: 9823) portable COG1597::LCB5 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only] 100.00::61-315 PF00781::DAGK_cat 99.93::63-195 GO:0005829::cytosol confident hh_2qv7_A_1::62-138,141-165,173-195,210-233,242-262,267-281,283-315 very confident psy3603 264 Q9VM17::SOSS complex subunit B homolog ::::Drosophila melanogaster (taxid: 7227) confident COG1599::RFA1 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins [DNA replication, recombination, and repair] 98.84::28-144 PF01336::tRNA_anti-codon 98.73::45-116 GO:0070876::SOSS complex confident hh_1o7i_A_1::31-133,140-151 very confident psy15132 786 Q5ZJJ2::Replication protein A 70 kDa DNA-binding subunit ::Plays an essential role in several cellular processes in DNA metabolism including replication, recombination and DNA repair. Binds and subsequently stabilizes single-stranded DNA intermediates and thus prevents complementary DNA from reannealing.::Gallus gallus (taxid: 9031) portable COG1599::RFA1 Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins [DNA replication, recombination, and repair] 99.08::439-649 PF08646::Rep_fac-A_C 99.96::204-347 GO:0043234::protein complex confident hh_1l1o_C_2::650-786 very confident psy7490 193 Q5E9D0::Eukaryotic translation initiation factor 2 subunit 2 ::eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.::Bos taurus (taxid: 9913) confident COG1601::GCD7 Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain [Translation, ribosomal structure and biogenesis] 100.00::19-167 PF01873::eIF-5_eIF-2B 100.00::36-156 GO:0003743::translation initiation factor activity confident hh_2g2k_A_1::39-161 very confident psy15553 489 P59325::Eukaryotic translation initiation factor 5 ::Catalyzes the hydrolysis of GTP bound to the 40S ribosomal initiation complex (40S.mRNA.Met-tRNA[F].eIF-2.GTP) with the subsequent joining of a 60S ribosomal subunit resulting in the release of eIF-2 and the guanine nucleotide. The subsequent joining of a 60S ribosomal subunit results in the formation of a functional 80S initiation complex (80S.mRNA.Met-tRNA[F]).::Mus musculus (taxid: 10090) very confident COG1601::GCD7 Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain [Translation, ribosomal structure and biogenesis] 99.95::16-133 PF01873::eIF-5_eIF-2B 100.00::3-130 GO:0005829::cytosol confident hh_2g2k_A_1::2-151 very confident psy4670 643 A8GXM1::Heme A synthase ::Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group.::Rickettsia bellii (strain OSU 85-389) (taxid: 391896) portable COG1612::CtaA Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones] 100.00::82-519 PF02628::COX15-CtaA 100.00::71-643 GO:0044710::single-organism metabolic process confident no hit no match psy4671 104 Q08DG6::Cytochrome c oxidase assembly protein COX15 homolog ::May be involved in the biosynthesis of heme A.::Bos taurus (taxid: 9913) confident COG1612::CtaA Uncharacterized protein required for cytochrome oxidase assembly [Posttranslational modification, protein turnover, chaperones] 99.66::4-96 PF02628::COX15-CtaA 99.72::2-90 GO:0044710::single-organism metabolic process confident no hit no match psy3156 557 Q32H09::Periplasmic trehalase ::Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system.::Shigella dysenteriae serotype 1 (strain Sd197) (taxid: 300267) confident COG1626::TreA Neutral trehalase [Carbohydrate transport and metabolism] 100.00::3-528 PF01204::Trehalase 100.00::10-524 GO:0005615::extracellular space confident hh_2jg0_A_1::3-13,15-41,46-63,65-66,72-76,84-84,88-106,111-203,205-233,236-264,266-292,295-295,299-394,398-408,410-414,421-458,462-546 very confident psy10829 545 Q9W2M2::Trehalase ::::Drosophila melanogaster (taxid: 7227) very confident COG1626::TreA Neutral trehalase [Carbohydrate transport and metabolism] 100.00::2-522 PF01204::Trehalase 100.00::3-518 GO:0005615::extracellular space confident hh_2jg0_A_1::1-33,39-57,59-63,69-70,78-78,82-100,105-196,198-228,231-258,260-286,288-289,298-395,400-409,412-451,455-523 very confident psy13121 158 Q9FWC1::Probable trehalase ::Involved in the regulation of trehalose content by hydrolyzing trehalose to glucose.::Oryza sativa subsp. japonica (taxid: 39947) confident COG1626::TreA Neutral trehalase [Carbohydrate transport and metabolism] 100.00::12-122 PF01204::Trehalase 100.00::14-118 GO:0071944::cell periphery confident hh_2jg0_A_1::14-51,55-127 very confident psy6045 105 P61485::60S ribosomal protein L36a ::::Danio rerio (taxid: 7955) very confident COG1631::RPL42A Ribosomal protein L44E [Translation, ribosomal structure and biogenesis] 100.00::4-96 PF00935::Ribosomal_L44 100.00::19-95 GO:0040035::hermaphrodite genitalia development very confident hh_4a18_C_1::3-101 very confident psy7821 231 O17445::60S ribosomal protein L15 ::::Drosophila melanogaster (taxid: 7227) confident COG1632::RPL15A Ribosomal protein L15E [Translation, ribosomal structure and biogenesis] 100.00::1-231 PF00827::Ribosomal_L15e 100.00::2-220 GO:0005840::ribosome confident hh_3jyw_L_1::71-127,130-211,213-221 very confident psy9590 350 Q09530::Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 ::Could act late in the splicing of pre-mRNA and mediate the release of the spliced mRNA from spliceosomes.::Caenorhabditis elegans (taxid: 6239) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::126-349 PF00005::ABC_tran 99.67::146-257 GO:0005829::cytosol confident hh_2xau_A_1::126-349 very confident psy496 319 Q8VHK9::Probable ATP-dependent RNA helicase DHX36 ::Plays a role in degradation and deadenylation of mRNAs containing in their 3'-UTR the consensus ARE sequence element. May function in sex development and spermatogenesis.::Mus musculus (taxid: 10090) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::42-317 PF00270::DEAD 99.83::46-217 GO:0070937::CRD-mediated mRNA stability complex confident rp_2xau_A_1::72-101,104-127,131-144,146-247 very confident psy6094 455 no hit no match COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::29-447 PF00271::Helicase_C 99.37::216-305 GO:0005634::nucleus confident hh_2xau_A_1::36-131,133-168,173-369,375-447 very confident psy2470 858 Q7QGX9::Mediator of RNA polymerase II transcription subunit 18 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Anopheles gambiae (taxid: 7165) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::203-857 PF00271::Helicase_C 99.43::449-538 GO:0016592::mediator complex confident rp_2xau_A_2::587-643,645-695 very confident psy2956 251 O43143::Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ::Pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA.::Homo sapiens (taxid: 9606) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::1-199 PF00271::Helicase_C 98.09::93-188 GO:0071013::catalytic step 2 spliceosome confident bp_2xau_A_1::13-60,62-120,122-195 very confident psy11774 304 O60114::Uncharacterized helicase C15C4.05 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::18-288 PF04408::HA2 99.47::205-268 GO:0005829::cytosol confident hh_2xau_A_1::23-180,184-191,196-288 very confident psy6093 350 no hit no match COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::7-343 PF04408::HA2 99.77::170-295 GO:0005829::cytosol confident hh_2xau_A_1::6-137,139-141,158-222,257-285,287-346 very confident psy14229 119 O60114::Uncharacterized helicase C15C4.05 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 99.71::4-118 PF04408::HA2 99.92::7-111 GO:0030529::ribonucleoprotein complex confident hh_2xau_A_1::5-65,67-75,88-101,103-119 very confident psy12726 558 Q09530::Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 ::Could act late in the splicing of pre-mRNA and mediate the release of the spliced mRNA from spliceosomes.::Caenorhabditis elegans (taxid: 6239) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::101-552 PF04408::HA2 99.55::3-78 GO:0071013::catalytic step 2 spliceosome confident hh_3i4u_A_1::3-218 very confident psy2072 294 Q20875::Putative pre-mRNA-splicing factor ATP-dependent RNA helicase F56D2.6 ::Pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA.::Caenorhabditis elegans (taxid: 6239) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 99.81::3-213 PF04408::HA2 99.68::13-116 GO:0071013::catalytic step 2 spliceosome confident hh_3i4u_A_1::2-52,54-59,81-167,172-218 very confident psy3476 1417 Q9DBV3::Probable ATP-dependent RNA helicase DHX34 ::Probable ATP-binding RNA helicase.::Mus musculus (taxid: 10090) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::24-773 PF04408::HA2 99.57::871-961 GO:0071013::catalytic step 2 spliceosome confident hh_2xau_A_1::19-143,315-370,372-398,409-772 very confident psy1907 1320 O60231::Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 ::Probable ATP-binding RNA helicase involved in pre-mRNA splicing.::Homo sapiens (taxid: 9606) portable COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::656-1123 PF07717::OB_NTP_bind 99.88::1192-1292 GO:0003676::nucleic acid binding confident hh_2xau_A_1::658-960,962-1087,1089-1133 very confident psy17746 182 P24384::Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 ::Acts late in the splicing of pre-mRNA. Mediates the release of the spliced mRNA from spliceosomes.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::1-117 PF07717::OB_NTP_bind 99.59::118-170 GO:0009790::embryo development confident hh_2xau_A_1::1-117 very confident psy17351 162 Q17R09::Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 ::Probable ATP-binding RNA helicase involved in pre-mRNA splicing.::Bos taurus (taxid: 9913) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 96.45::1-86 PF07717::OB_NTP_bind 99.69::9-81 GO:0031981::nuclear lumen confident hh_3i4u_A_1::1-89 very confident psy2073 126 O43143::Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 ::Pre-mRNA processing factor involved in disassembly of spliceosomes after the release of mature mRNA.::Homo sapiens (taxid: 9606) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 98.27::15-93 PF07717::OB_NTP_bind 99.95::14-95 GO:0071013::catalytic step 2 spliceosome confident hh_2xau_A_1::12-121 very confident psy14926 140 P34498::Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 ::Probable ATP-binding RNA helicase involved in pre-mRNA splicing.::Caenorhabditis elegans (taxid: 6239) confident COG1643::HrpA HrpA-like helicases [DNA replication, recombination, and repair] 100.00::1-136 no hit no match GO:0071007::U2-type catalytic step 2 spliceosome confident hh_2xau_A_1::2-97,104-136 very confident psy10221 67 Q8IRC7::LIM/homeobox protein Awh ::Probable transcription factor. Required for the establishment of a subset of imaginal tissues: the abdominal histoblasts and the salivary gland imaginal rings.::Drosophila melanogaster (taxid: 7227) confident COG1645::Uncharacterized Zn-finger containing protein [General function prediction only] 94.55::38-64 PF00412::LIM 99.78::12-67 GO:0003714::transcription corepressor activity confident hh_2rgt_A_1::7-50,53-66 very confident psy6793 376 Q5BKQ4::Inactive pancreatic lipase-related protein 1 ::May function as inhibitor of dietary triglyceride digestion. Lacks detectable lipase activity (in vitro).::Mus musculus (taxid: 10090) portable COG1647::Esterase/lipase [General function prediction only] 99.09::113-236 PF00151::Lipase 100.00::82-372 GO:0046503::glycerolipid catabolic process confident hh_1bu8_A_1::82-137,139-165,167-217,219-280,282-304,317-319,321-338,340-374 very confident psy2106 313 Q5ZJX1::Abhydrolase domain-containing protein FAM108C1 ::::Gallus gallus (taxid: 9031) confident COG1647::Esterase/lipase [General function prediction only] 99.92::106-296 PF12695::Abhydrolase_5 99.88::107-279 GO:0005576::extracellular region confident hh_3fsg_A_1::89-99,103-167,171-173,176-267,269-299 very confident psy1055 256 O94437::Abhydrolase domain-containing protein C22H12.03 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1647::Esterase/lipase [General function prediction only] 99.92::12-254 PF12697::Abhydrolase_6 99.97::19-247 GO:0016790::thiolester hydrolase activity confident hh_3bf7_A_1::14-137,143-161,164-164,167-180,182-188,191-254 very confident psy17040 354 Q8T674::ABC transporter G family member 20 ::::Dictyostelium discoideum (taxid: 44689) portable COG1668::NatB ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism] 99.85::33-350 PF12698::ABC2_membrane_3 99.91::51-349 GO:0005886::plasma membrane confident hh_3cni_A_1::73-90,106-115,117-155,160-162,171-206,208-230,232-234,236-246 confident psy7369 265 P41233::ATP-binding cassette sub-family A member 1 ::cAMP-dependent and sulfonylurea-sensitive anion transporter. Key gatekeeper influencing intracellular cholesterol transport.::Mus musculus (taxid: 10090) portable COG1668::NatB ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism] 94.91::137-201 PF12698::ABC2_membrane_3 99.21::91-252 GO:0016023::cytoplasmic membrane-bounded vesicle confident rp_1vt4_I_1::7-23,26-29,39-54,58-70,73-81,85-99,101-112,117-139,141-157,161-180,184-218,222-225,227-232,235-253 portable psy7370 247 P41233::ATP-binding cassette sub-family A member 1 ::cAMP-dependent and sulfonylurea-sensitive anion transporter. Key gatekeeper influencing intracellular cholesterol transport.::Mus musculus (taxid: 10090) portable COG1668::NatB ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism] 92.94::179-239 PF12698::ABC2_membrane_3 98.76::22-243 GO:0016023::cytoplasmic membrane-bounded vesicle confident no hit no match psy7379 465 P41233::ATP-binding cassette sub-family A member 1 ::cAMP-dependent and sulfonylurea-sensitive anion transporter. Key gatekeeper influencing intracellular cholesterol transport.::Mus musculus (taxid: 10090) portable COG1668::NatB ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism] 96.23::200-322 PF12698::ABC2_membrane_3 99.26::74-316 GO:0044699::single-organism process confident no hit no match psy5744 157 Q5R8H5::General transcription factor IIE subunit 1 ::Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.::Pongo abelii (taxid: 9601) confident COG1675::TFA1 Transcription initiation factor IIE, alpha subunit [Transcription] 99.97::14-157 PF02002::TFIIE_alpha 99.96::19-126 GO:0005634::nucleus confident hh_1vd4_A_1::125-156 confident psy10975 574 Q9Y3I0::tRNA-splicing ligase RtcB homolog ::Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs.::Homo sapiens (taxid: 9606) confident COG1690::RtcB Uncharacterized conserved protein [Function unknown] 100.00::1-411 PF01139::RtcB 100.00::1-411 GO:0001701::in utero embryonic development confident bp_2epg_A_1::132-162,164-240,242-267,272-411 very confident psy10980 105 C3YN79::tRNA-splicing ligase RtcB homolog ::Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs.::Branchiostoma floridae (taxid: 7739) very confident COG1690::RtcB Uncharacterized conserved protein [Function unknown] 99.53::40-103 PF01139::RtcB 99.75::40-103 GO:0003972::RNA ligase (ATP) activity confident hh_2epg_A_1::40-103 very confident psy10094 257 Q9Y3I0::tRNA-splicing ligase RtcB homolog ::Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs.::Homo sapiens (taxid: 9606) confident COG1690::RtcB Uncharacterized conserved protein [Function unknown] 100.00::1-249 PF01139::RtcB 100.00::1-253 GO:0003972::RNA ligase (ATP) activity confident hh_2epg_A_1::1-104,106-125,140-203,205-229,232-233,236-257 very confident psy2133 207 P34648::Uncharacterized protein ZK632.2 ::::Caenorhabditis elegans (taxid: 6239) portable COG1716::FOG: FHA domain [Signal transduction mechanisms] 99.57::17-104 PF00498::FHA 99.85::19-93 GO:0005634::nucleus confident hh_4h87_A_1::1-103 very confident psy5454 129 P55196::Afadin ::Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton.::Homo sapiens (taxid: 9606) confident COG1716::FOG: FHA domain [Signal transduction mechanisms] 99.23::34-109 PF00498::FHA 99.64::35-105 GO:0005730::nucleolus confident hh_1wln_A_1::2-23,25-41,46-106 very confident psy588 903 Q3URD3::Sarcolemmal membrane-associated protein ::May play a role during myoblast fusion.::Mus musculus (taxid: 10090) portable COG1716::FOG: FHA domain [Signal transduction mechanisms] 99.33::31-113 PF00498::FHA 99.64::33-109 GO:0005829::cytosol confident hh_1mzk_A_1::6-38,45-116 very confident psy13346 238 Q8BIZ6::Smad nuclear-interacting protein 1 ::Down-regulates NF-kappa-B signaling by competing with RELA for CREBBP/EP300 binding. Involved in the microRNA (miRNA) biogenesis.::Mus musculus (taxid: 10090) confident COG1716::FOG: FHA domain [Signal transduction mechanisms] 99.49::139-230 PF00498::FHA 99.81::142-217 GO:0005829::cytosol confident hh_2jpe_A_1::93-117,119-172,179-229 very confident psy14677 483 Q8BIZ6::Smad nuclear-interacting protein 1 ::Down-regulates NF-kappa-B signaling by competing with RELA for CREBBP/EP300 binding. Involved in the microRNA (miRNA) biogenesis.::Mus musculus (taxid: 10090) confident COG1716::FOG: FHA domain [Signal transduction mechanisms] 99.41::374-468 PF00498::FHA 99.75::378-458 GO:0006355::regulation of transcription, DNA-dependent confident hh_3elv_A_1::316-408,414-414,419-467 very confident psy12929 198 Q12972::Nuclear inhibitor of protein phosphatase 1 ::Isoform Gamma is a site-specific single-strand endoribonuclease that cleaves single strand RNA 3' to purines and pyrimidines in A+U-rich regions. It generates 5'-phosphate termini at the site of cleavage. This isoform does not inhibit PP-1. May be implicated in mRNA splicing.::Homo sapiens (taxid: 9606) confident COG1716::FOG: FHA domain [Signal transduction mechanisms] 99.24::145-198 PF06151::Trehalose_recp 99.77::4-81 GO:0016607::nuclear speck confident hh_2jpe_A_1::104-112,118-198 very confident psy10574 232 Q96EZ8::Microspherule protein 1 ::Modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. May also be an inhibitor of TERT telomerase activity.::Homo sapiens (taxid: 9606) confident COG1716::FOG: FHA domain [Signal transduction mechanisms] 98.99::142-229 PF13325::MCRS_N 100.00::5-120 GO:0046972::histone acetyltransferase activity (H4-K16 specific) confident hh_2pie_A_1::143-158,162-226 confident psy14535 155 P04359::60S ribosomal protein L32 ::::Drosophila melanogaster (taxid: 7227) very confident COG1717::RPL32 Ribosomal protein L32E [Translation, ribosomal structure and biogenesis] 100.00::23-149 PF01655::Ribosomal_L32e 100.00::36-145 GO:0022625::cytosolic large ribosomal subunit very confident hh_2zkr_y_1::21-155 very confident psy2553 134 P04359::60S ribosomal protein L32 ::::Drosophila melanogaster (taxid: 7227) very confident COG1717::RPL32 Ribosomal protein L32E [Translation, ribosomal structure and biogenesis] 100.00::4-128 PF01655::Ribosomal_L32e 100.00::15-124 GO:0022625::cytosolic large ribosomal subunit very confident hh_2zkr_y_1::1-134 very confident psy10135 351 Q8SVI7::Probable serine/threonine-protein kinase RIO1 homolog ::Required for the final endonucleolytic cleavage at site D converting 20S pre-rRNA into the mature 18S rRNA. Has a role in the cell cycle where it is required for entrance into S-phase and in the control of the onset of anaphase. Appears to also be involved in the maintenance of chromosome stability and correct mitotic segregation.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG1718::RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning] 100.00::4-255 PF01163::RIO1 100.00::50-237 GO:0005829::cytosol confident hh_1zth_A_1::3-59,68-99,102-200,202-237,239-250 very confident psy15785 542 P40423::Myosin regulatory light chain sqh ::Required for cytokinesis, could regulate contractile ring function.::Drosophila melanogaster (taxid: 7227) confident COG1723::Uncharacterized conserved protein [Function unknown] 100.00::2-305 PF02582::DUF155 100.00::58-300 GO:0060288::formation of a compartment boundary confident hh_3j04_B_1::357-469,509-537 very confident psy2274 244 Q9VS34::60S ribosomal protein L18 ::::Drosophila melanogaster (taxid: 7227) confident COG1727::RPL18A Ribosomal protein L18E [Translation, ribosomal structure and biogenesis] 100.00::48-165 PF00828::Ribosomal_L18e 99.42::45-157 GO:0022625::cytosolic large ribosomal subunit confident hh_2zkr_o_1::35-165 very confident psy3204 264 Q99471::Prefoldin subunit 5 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins. Represses the transcriptional activity of MYC.::Homo sapiens (taxid: 9606) confident COG1730::GIM5 Predicted prefoldin, molecular chaperone implicated in de novo protein folding [Posttranslational modification, protein turnover, chaperones] 99.91::161-256 PF02996::Prefoldin 99.90::156-256 GO:0005737::cytoplasm confident hh_2zdi_C_1::161-255 very confident psy10036 366 Q8BJ56::Patatin-like phospholipase domain-containing protein 2 ::Catalyzes the initial step in triglyceride hydrolysis in adipocyte and non-adipocyte lipid droplets. Also has acylglycerol transacylase activity. May act coordinately with LIPE/HLS within the lipolytic cascade. Regulates adiposome size and may be involved in the degradation of adiposomes. May play an important role in energy homeostasis. May play a role in the response of the organism to starvation, enhancing hydrolysis of triglycerides and providing free fatty acids to other tissues to be oxidized in situations of energy depletion.::Mus musculus (taxid: 10090) portable COG1752::RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] 98.51::9-56 PF01734::Patatin 96.02::35-57 GO:0010884::positive regulation of lipid storage confident hh_3tu3_B_1::12-33,36-56 portable psy15139 189 Q96AD5::Patatin-like phospholipase domain-containing protein 2 ::Catalyzes the initial step in triglyceride hydrolysis in adipocyte and non-adipocyte lipid droplets. Also has acylglycerol transacylase activity. May act coordinately with LIPE/HLS within the lipolytic cascade. Regulates adiposome size and may be involved in the degradation of adiposomes. May play an important role in energy homeostasis. May play a role in the response of the organism to starvation, enhancing hydrolysis of triglycerides and providing free fatty acids to other tissues to be oxidized in situations of energy depletion.::Homo sapiens (taxid: 9606) portable COG1752::RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only] 98.05::99-154 PF01734::Patatin 96.94::117-153 GO:0010884::positive regulation of lipid storage confident hh_3tu3_B_1::98-152 portable psy548 84 Q32PE0::DNA-directed RNA polymerases I, II, and III subunit RPABC2 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II, and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, POLR2F/RPB6 is part of the clamp element and togther with parts of RPB1 and RPB2 forms a pocket to which the RPB4-RPB7 subcomplex binds.::Bos taurus (taxid: 9913) confident COG1758::RpoZ DNA-directed RNA polymerase, subunit K/omega [Transcription] 99.83::3-72 PF01192::RNA_pol_Rpb6 99.78::7-62 GO:0005665::DNA-directed RNA polymerase II, core complex confident hh_1qkl_A_1::2-83 very confident psy8360 152 Q32PE0::DNA-directed RNA polymerases I, II, and III subunit RPABC2 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II, and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, POLR2F/RPB6 is part of the clamp element and togther with parts of RPB1 and RPB2 forms a pocket to which the RPB4-RPB7 subcomplex binds.::Bos taurus (taxid: 9913) very confident COG1758::RpoZ DNA-directed RNA polymerase, subunit K/omega [Transcription] 99.72::76-140 PF01192::RNA_pol_Rpb6 99.62::78-130 GO:0005665::DNA-directed RNA polymerase II, core complex very confident hh_1qkl_A_1::67-151 very confident psy11162 91 Q7PVQ9::DNA-directed RNA polymerase II subunit RPB11 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB11 is part of the core element with the central large cleft.::Anopheles gambiae (taxid: 7165) very confident COG1761::RPB11 DNA-directed RNA polymerase, subunit L [Transcription] 100.00::1-91 PF13656::RNA_pol_L_2 100.00::15-91 GO:0005665::DNA-directed RNA polymerase II, core complex very confident hh_3h0g_K_1::3-91 very confident psy12711 639 Q09177::DNA-directed RNA polymerases I and III subunit RPAC2 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common core component of RNA polymerases I and III which synthesize ribosomal RNA precursors and small RNAs, such as 5S rRNA and tRNAs, respectively.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1761::RPB11 DNA-directed RNA polymerase, subunit L [Transcription] 99.92::90-188 PF13656::RNA_pol_L_2 99.94::105-181 GO:0043232::intracellular non-membrane-bounded organelle confident hh_3h0g_K_1::75-100,104-194 very confident psy4818 734 O70196::Prolyl endopeptidase ::Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has high activity on the succinyl- (suc-) peptide-4-methylcoumaryl-7-amide (MCA) substrates suc-Gly-Pro-Leu-Gly-Pro-MCA, suc-Gly-Pro-MCA and suc-Ala-Ala-Ala-MCA.::Rattus norvegicus (taxid: 10116) confident COG1770::PtrB Protease II [Amino acid transport and metabolism] 100.00::20-727 PF02897::Peptidase_S9_N 100.00::23-446 GO:0005829::cytosol confident hh_2xdw_A_1::21-32,34-286,288-429,435-644,649-730 very confident psy2521 783 O70196::Prolyl endopeptidase ::Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has high activity on the succinyl- (suc-) peptide-4-methylcoumaryl-7-amide (MCA) substrates suc-Gly-Pro-Leu-Gly-Pro-MCA, suc-Gly-Pro-MCA and suc-Ala-Ala-Ala-MCA.::Rattus norvegicus (taxid: 10116) confident COG1770::PtrB Protease II [Amino acid transport and metabolism] 100.00::53-780 PF02897::Peptidase_S9_N 100.00::57-513 GO:0005829::cytosol confident hh_2xdw_A_1::54-113,148-353,355-496,502-504,507-711,716-775 very confident psy1288 1012 O70196::Prolyl endopeptidase ::Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has high activity on the succinyl- (suc-) peptide-4-methylcoumaryl-7-amide (MCA) substrates suc-Gly-Pro-Leu-Gly-Pro-MCA, suc-Gly-Pro-MCA and suc-Ala-Ala-Ala-MCA.::Rattus norvegicus (taxid: 10116) confident COG1770::PtrB Protease II [Amino acid transport and metabolism] 100.00::36-722 PF02897::Peptidase_S9_N 100.00::39-390 GO:0005829::cytosol confident no hit no match psy17634 119 Q9V3D6::Probable cleavage and polyadenylation specificity factor subunit 2 ::CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition.::Drosophila melanogaster (taxid: 7227) confident COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 99.83::3-105 PF00753::Lactamase_B 99.54::17-89 GO:0005847::mRNA cleavage and polyadenylation specificity factor complex confident hh_2ycb_A_1::4-77,79-101 very confident psy9121 203 Q8K114::Integrator complex subunit 9 ::Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.::Mus musculus (taxid: 10090) confident COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 99.96::2-201 PF00753::Lactamase_B 98.62::10-141 GO:0034472::snRNA 3'-end processing confident hh_2i7t_A_1::1-34,47-51,86-148,175-202 very confident psy9131 78 Q8K114::Integrator complex subunit 9 ::Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.::Mus musculus (taxid: 10090) confident COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 99.90::2-77 PF00753::Lactamase_B 99.05::4-71 GO:0034472::snRNA 3'-end processing confident hh_2i7t_A_1::3-76 very confident psy9120 263 Q8K114::Integrator complex subunit 9 ::Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.::Mus musculus (taxid: 10090) confident COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 94.76::6-122 PF10996::Beta-Casp 98.47::39-79 GO:0034472::snRNA 3'-end processing confident hh_2i7x_A_1::37-49,53-80 confident psy9123 118 Q8K114::Integrator complex subunit 9 ::Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.::Mus musculus (taxid: 10090) confident COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 99.71::32-116 PF10996::Beta-Casp 99.27::64-115 GO:0034472::snRNA 3'-end processing confident hh_2i7x_A_1::23-116 confident psy8348 622 no hit no match COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 100.00::1-444 PF11718::CPSF73-100_C 100.00::465-622 GO:0003677::DNA binding very confident hh_2i7t_A_1::2-447 very confident psy8351 103 no hit no match COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 99.92::1-102 PF12706::Lactamase_B_2 97.79::27-94 GO:0004521::endoribonuclease activity confident hh_2i7t_A_1::1-80,87-100 very confident psy9966 1101 Q5ZIH0::Integrator complex subunit 11 ::Catalytic component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. Mediates the snRNAs 3' cleavage.::Gallus gallus (taxid: 9031) confident COG1782::Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only] 100.00::4-284 PF13679::Methyltransf_32 99.96::669-870 GO:0007275::multicellular organismal development confident hh_2ycb_A_1::1-106,108-150,152-284 very confident psy2773 236 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) portable COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 100.00::2-202 PF00245::Alk_phosphatase 100.00::2-200 GO:0008270::zinc ion binding confident hh_1k7h_A_1::2-208 very confident psy16916 582 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) confident COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 100.00::52-545 PF00245::Alk_phosphatase 100.00::58-543 GO:0009986::cell surface confident hh_1zed_A_1::29-149,152-217,221-255,260-297,304-334,380-446,452-475,478-552 very confident psy2455 414 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) portable COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 100.00::25-359 PF00245::Alk_phosphatase 100.00::30-359 GO:0014070::response to organic cyclic compound confident hh_1k7h_A_2::233-388,391-414 very confident psy17994 268 P05186::Alkaline phosphatase, tissue-nonspecific isozyme ::This isozyme may play a role in skeletal mineralization.::Homo sapiens (taxid: 9606) confident COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 100.00::1-257 PF00245::Alk_phosphatase 100.00::1-255 GO:0016462::pyrophosphatase activity confident hh_1zed_A_1::1-24,30-92,95-149,152-166,170-211,216-255 very confident psy11731 538 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) confident COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 100.00::49-507 PF00245::Alk_phosphatase 100.00::58-505 GO:0016462::pyrophosphatase activity confident hh_1zed_A_1::29-144,147-213,217-235,239-264,269-307,310-374,379-427,429-431,435-439,442-513 very confident psy17925 120 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) portable COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 98.75::44-93 PF00245::Alk_phosphatase 99.51::8-91 GO:0016787::hydrolase activity confident hh_1k7h_A_1::7-69,71-99 very confident psy17927 122 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) confident COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 99.92::7-118 PF00245::Alk_phosphatase 99.94::7-112 GO:0016787::hydrolase activity confident hh_1zed_A_1::7-40,42-101,105-113 very confident psy17926 95 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) confident COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 99.86::4-88 PF00245::Alk_phosphatase 99.91::2-91 GO:0016787::hydrolase activity confident rp_1zed_A_1::20-72 very confident psy16427 146 Q92058::Alkaline phosphatase, tissue-nonspecific isozyme ::::Gallus gallus (taxid: 9031) portable COG1785::PhoA Alkaline phosphatase [Inorganic ion transport and metabolism] 99.83::43-144 PF00245::Alk_phosphatase 99.92::49-144 GO:0044464::cell part confident hh_1zed_A_1::15-40,45-144 very confident psy10006 67 P56006::Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A ::::Helicobacter pylori (strain ATCC 700392 / 26695) (taxid: 85962) confident COG1788::AtoD Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism] 99.55::1-40 PF01144::CoA_trans 98.37::2-39 GO:0045335::phagocytic vesicle confident hh_3rrl_A_1::1-53 very confident psy840 178 Q9BV57::1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase ::Catalyzes the formation of formate and 2-keto-4-methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Also down-regulates cell migration mediated by MMP14. Necessary for hepatitis C virus replication in an otherwise non-permissive cell line.::Homo sapiens (taxid: 9606) very confident COG1791::Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown] 100.00::1-173 PF03079::ARD 100.00::3-153 GO:0005794::Golgi apparatus very confident hh_1vr3_A_1::1-10,12-32,34-173 very confident psy14581 124 P97386::DNA ligase 3 ::The alpha isoform interacts with DNA-repair protein XRCC1 and can correct defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents. The beta isoform does not interact with XRCC1 and may be specifically involved in the completion of homologous recombination events that occur during meiotic prophase.::Mus musculus (taxid: 10090) confident COG1793::CDC9 ATP-dependent DNA ligase [DNA replication, recombination, and repair] 98.61::6-93 PF04679::DNA_ligase_A_C 98.84::34-78 GO:0006281::DNA repair confident hh_3l2p_A_1::32-97 very confident psy11146 271 O74898::Diphthine synthase ::S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) very confident COG1798::DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] 100.00::1-268 PF00590::TP_methylase 100.00::1-236 GO:0005829::cytosol very confident hh_3i4t_A_1::1-41,43-267 very confident psy11150 201 Q5E982::Diphthine synthase ::S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.::Bos taurus (taxid: 9913) confident COG1798::DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] 100.00::1-134 PF07061::Swi5 99.90::131-200 GO:0005634::nucleus confident hh_2z6r_A_1::1-46,62-133 very confident psy1367 381 O09174::Alpha-methylacyl-CoA racemase ::Racemization of 2-methyl-branched fatty acid CoA esters. Responsible for the conversion of pristanoyl-CoA and C27-bile acyl-CoAs to their (S)-stereoisomers.::Mus musculus (taxid: 10090) very confident COG1804::CaiB Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] 100.00::1-371 PF02515::CoA_transf_3 100.00::54-245 GO:0005102::receptor binding very confident hh_2g04_A_1::1-62,65-316,318-336,339-352 very confident psy16437 501 Q7TNE1::CaiB/baiF CoA-transferase family protein C7orf10 homolog ::::Mus musculus (taxid: 10090) confident COG1804::CaiB Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion] 100.00::214-501 PF02515::CoA_transf_3 100.00::284-472 GO:0005739::mitochondrion confident hh_4ed9_A_1::214-252,254-500 very confident psy15921 158 Q9VQE9::Transmembrane and TPR repeat-containing protein CG31690 ::::Drosophila melanogaster (taxid: 7227) confident COG1807::ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane] 97.84::45-156 PF13231::PMT_2 98.94::49-154 GO:0005739::mitochondrion confident hh_3rce_A_1::46-94,96-155 portable psy6437 254 Q9VQE9::Transmembrane and TPR repeat-containing protein CG31690 ::::Drosophila melanogaster (taxid: 7227) confident COG1807::ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane] 98.07::38-210 PF13231::PMT_2 99.24::41-218 GO:0005783::endoplasmic reticulum confident hh_3rce_A_1::42-47,49-87,89-110,112-138 portable psy10415 130 Q9VQE9::Transmembrane and TPR repeat-containing protein CG31690 ::::Drosophila melanogaster (taxid: 7227) confident COG1807::ArnT 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane] 96.19::36-126 PF13231::PMT_2 98.32::38-127 GO:0030154::cell differentiation confident no hit no match psy15247 203 Q7MDL6::Adenosine deaminase ::::Vibrio vulnificus (strain YJ016) (taxid: 196600) portable COG1816::Add Adenosine deaminase [Nucleotide transport and metabolism] 100.00::4-200 PF00962::A_deaminase 100.00::10-195 GO:0005737::cytoplasm confident hh_3iar_A_1::4-90,92-202 very confident psy47 1001 O80452::AMP deaminase ::AMP deaminase plays a critical role in energy metabolism. Essential for the transition from zygote to embryo.::Arabidopsis thaliana (taxid: 3702) confident COG1816::Add Adenosine deaminase [Nucleotide transport and metabolism] 100.00::554-947 PF00962::A_deaminase 100.00::554-944 GO:0005829::cytosol confident hh_2a3l_A_1::483-499,508-540,543-593,595-779,781-848,851-951 very confident psy8141 480 Q01433::AMP deaminase 2 ::AMP deaminase plays a critical role in energy metabolism.::Homo sapiens (taxid: 9606) confident COG1816::Add Adenosine deaminase [Nucleotide transport and metabolism] 100.00::3-422 PF00962::A_deaminase 100.00::7-420 GO:0005829::cytosol confident hh_2a3l_A_1::5-27,29-44,46-169,171-246,284-312,344-458 very confident psy381 70 O05496::Uncharacterized UDP-glucosyltransferase YdhE ::::Bacillus subtilis (strain 168) (taxid: 224308) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.81::1-69 PF00201::UDPGT 99.89::1-69 GO:0015020::glucuronosyltransferase activity confident hh_2o6l_A_1::1-69 very confident psy16995 165 P08541::UDP-glucuronosyltransferase 2B2 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. 2B2 acts on various endogenous steroids, especially etiocholanolone and androsterone.::Rattus norvegicus (taxid: 10116) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 98.73::47-165 PF00201::UDPGT 100.00::1-165 GO:0015020::glucuronosyltransferase activity confident hh_2o6l_A_1::84-114,117-165 very confident psy2178 357 P08542::UDP-glucuronosyltransferase 2B17 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. 2B17 is active on testosterone.::Rattus norvegicus (taxid: 10116) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.95::75-289 PF00201::UDPGT 100.00::9-305 GO:0015020::glucuronosyltransferase activity confident hh_2c1x_A_1::86-147,151-168,170-292,304-311,314-323 very confident psy14941 513 P16662::UDP-glucuronosyltransferase 2B7 ::Its unique specificity for 3,4-catechol estrogens and estriol suggests it may play an important role in regulating the level and activity of these potent and active estrogen metabolites.::Homo sapiens (taxid: 9606) confident COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 100.00::27-462 PF00201::UDPGT 100.00::27-511 GO:0015020::glucuronosyltransferase activity very confident hh_2iyf_A_1::27-30,32-90,94-101,107-117,120-128,130-146,148-171,174-174,182-184,193-204,211-213,215-215,217-226,228-273,275-275,280-300,304-335,337-337,339-354,357-442,445-460 very confident psy16938 403 O75795::UDP-glucuronosyltransferase 2B17 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. The major substrates of this isozyme are eugenol > 4-methylumbelliferone > dihydrotestosterone (DHT) > androstane-3-alpha,17-beta-diol (3-alpha-diol) > testosterone > androsterone (ADT).::Homo sapiens (taxid: 9606) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.95::171-346 PF00201::UDPGT 100.00::171-392 GO:0052696::flavonoid glucuronidation confident hh_2iyf_A_1::171-210,212-237,240-326,329-344 very confident psy16939 174 O75795::UDP-glucuronosyltransferase 2B17 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. The major substrates of this isozyme are eugenol > 4-methylumbelliferone > dihydrotestosterone (DHT) > androstane-3-alpha,17-beta-diol (3-alpha-diol) > testosterone > androsterone (ADT).::Homo sapiens (taxid: 9606) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.96::9-173 PF00201::UDPGT 100.00::18-173 GO:0052696::flavonoid glucuronidation confident hh_3otg_A_1::32-44,48-81,83-100,103-173 very confident psy15582 477 P08542::UDP-glucuronosyltransferase 2B17 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. 2B17 is active on testosterone.::Rattus norvegicus (taxid: 10116) confident COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 100.00::216-444 PF00201::UDPGT 100.00::30-475 GO:0052696::flavonoid glucuronidation confident hh_2c1x_A_1::221-283,287-303,305-439 very confident psy16993 703 P35503::UDP-glucuronosyltransferase 1-3 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Homo sapiens (taxid: 9606) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.98::415-640 PF00201::UDPGT 100.00::204-694 GO:0052696::flavonoid glucuronidation confident hh_2iya_A_1::295-302,305-314,316-318,320-377,387-387,389-392,394-403,405-407,413-454,460-481,485-533,536-620,623-640 very confident psy10598 119 P36510::UDP-glucuronosyltransferase 2A1 ::UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Active on odorants and seems to be involved in olfaction; it could help clear lipophilic odorant molecules from the sensory epithelium.::Rattus norvegicus (taxid: 10116) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.90::15-118 PF00201::UDPGT 99.95::8-119 GO:0052696::flavonoid glucuronidation confident hh_2yjn_A_1::18-33,40-41,44-118 very confident psy16503 244 P36514::UDP-glucuronosyltransferase 2C1 (Fragment) ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Oryctolagus cuniculus (taxid: 9986) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.96::13-187 PF00201::UDPGT 100.00::3-236 GO:0052696::flavonoid glucuronidation confident hh_2o6l_A_1::3-27,30-166 very confident psy18216 487 P36537::UDP-glucuronosyltransferase 2B10 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Homo sapiens (taxid: 9606) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.93::49-279 PF00201::UDPGT 100.00::1-319 GO:0052696::flavonoid glucuronidation confident hh_2iya_A_1::34-41,43-46,49-89,95-118,122-139,141-172,175-259,262-279 very confident psy17870 406 P54855::UDP-glucuronosyltransferase 2B15 ::UDPGTs are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme displays activity toward several classes of xenobiotic substrates, including simple phenolic compounds, 7-hydroxylated coumarins, flavonoids, anthraquinones, and certain drugs and their hydroxylated metabolites. It also catalyzes the glucuronidation of endogenous estrogens and androgens.::Homo sapiens (taxid: 9606) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.95::201-350 PF00201::UDPGT 100.00::1-405 GO:0052696::flavonoid glucuronidation confident hh_2pq6_A_1::45-110,114-122,201-208,210-293,295-312,314-329 very confident psy14950 77 Q22295::Putative UDP-glucuronosyltransferase ugt-50 ::::Caenorhabditis elegans (taxid: 6239) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.82::4-76 PF00201::UDPGT 99.91::1-76 GO:0052696::flavonoid glucuronidation confident hh_2iyf_A_1::6-76 very confident psy1202 136 Q64550::UDP-glucuronosyltransferase 1-1 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Glucuronates opioids and bilirubin.::Rattus norvegicus (taxid: 10116) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.86::6-112 PF00201::UDPGT 100.00::1-134 GO:0052696::flavonoid glucuronidation confident hh_2iyf_A_1::6-92,95-110 very confident psy16117 668 Q64638::UDP-glucuronosyltransferase 1-5 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Rattus norvegicus (taxid: 10116) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.97::261-489 PF00201::UDPGT 100.00::154-518 GO:0052696::flavonoid glucuronidation confident hh_3hbf_A_2::523-532,544-564,566-667 very confident psy10599 112 Q6PDD0::UDP-glucuronosyltransferase 2A2 ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Mus musculus (taxid: 10090) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.90::15-111 PF00201::UDPGT 99.95::17-112 GO:0052696::flavonoid glucuronidation confident hh_2yjn_A_1::16-34,37-111 very confident psy10186 124 Q6UWM9::UDP-glucuronosyltransferase 2A3 ::UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Homo sapiens (taxid: 9606) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.93::4-124 PF00201::UDPGT 99.97::1-124 GO:0052696::flavonoid glucuronidation confident hh_3otg_A_1::3-48,51-123 very confident psy10509 847 Q8BWQ1::UDP-glucuronosyltransferase 2A3 ::UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds.::Mus musculus (taxid: 10090) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.95::439-667 PF00201::UDPGT 100.00::289-712 GO:0052696::flavonoid glucuronidation confident hh_2c1x_A_1::444-445,447-507,511-517,519-662 very confident psy5669 116 Q9BY64::UDP-glucuronosyltransferase 2B28 ::UDPGTs are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isozyme has glucuronidating capacity with steroid substrates such as 5-beta-androstane 3-alpha,17-beta-diol, estradiol, ADT, eugenol and bile acids. Only isoform 1 seems to be active.::Homo sapiens (taxid: 9606) portable COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 94.22::2-51 PF00201::UDPGT 99.96::2-105 GO:0052696::flavonoid glucuronidation confident hh_2iya_A_1::2-31,34-51 confident psy11555 484 Q9Y4X1::UDP-glucuronosyltransferase 2A1 ::UDP-glucuronosyltransferases catalyze phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase water solubility and enhance excretion. They are of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. Active on odorants and seems to be involved in olfaction; it could help clear lipophilic odorant molecules from the sensory epithelium.::Homo sapiens (taxid: 9606) confident COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 100.00::200-427 PF00201::UDPGT 100.00::1-481 GO:0052696::flavonoid glucuronidation confident hh_2iyf_A_1::1-38,43-43,57-58,62-83,86-93,95-106,108-135,138-140,148-149,158-169,177-181,183-192,194-196,198-239,241-241,246-266,270-318,321-407,410-425 very confident psy10494 203 no hit no match COG1819::Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] 99.91::12-147 PF00201::UDPGT 100.00::13-202 GO:0052696::flavonoid glucuronidation confident hh_3hbf_A_1::16-22,28-109,111-127 very confident psy12256 417 Q8JZV7::Putative N-acetylglucosamine-6-phosphate deacetylase ::::Mus musculus (taxid: 10090) confident COG1820::NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] 100.00::2-417 PF01979::Amidohydro_1 99.66::351-400 GO:0008448::N-acetylglucosamine-6-phosphate deacetylase activity confident hh_1o12_A_1::6-7,9-33,40-120,127-142,144-202,207-237,254-263,275-276,293-301,313-322,335-335,337-383,385-416 very confident psy8562 205 A4JHZ6::50S ribosomal protein L25 ::This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.::Burkholderia vietnamiensis (strain G4 / LMG 22486) (taxid: 269482) very confident COG1825::RplY Ribosomal protein L25 (general stress protein Ctc) [Translation, ribosomal structure and biogenesis] 99.96::1-93 PF01386::Ribosomal_L25p 99.97::3-90 GO:0003735::structural constituent of ribosome confident hh_1feu_A_1::1-9,13-35,37-54,56-95,97-110,113-117,119-171,174-187 very confident psy8560 205 A4JHZ6::50S ribosomal protein L25 ::This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.::Burkholderia vietnamiensis (strain G4 / LMG 22486) (taxid: 269482) very confident COG1825::RplY Ribosomal protein L25 (general stress protein Ctc) [Translation, ribosomal structure and biogenesis] 99.96::1-93 PF01386::Ribosomal_L25p 99.97::3-90 GO:0003735::structural constituent of ribosome confident hh_1feu_A_1::1-9,13-35,37-54,56-95,97-110,113-117,119-171,174-187 very confident psy8561 205 A4JHZ6::50S ribosomal protein L25 ::This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.::Burkholderia vietnamiensis (strain G4 / LMG 22486) (taxid: 269482) very confident COG1825::RplY Ribosomal protein L25 (general stress protein Ctc) [Translation, ribosomal structure and biogenesis] 99.96::1-93 PF01386::Ribosomal_L25p 99.97::3-90 GO:0003735::structural constituent of ribosome confident hh_1feu_A_1::1-9,13-35,37-54,56-95,97-110,113-117,119-171,174-187 very confident psy958 137 Q6MG60::N(G),N(G)-dimethylarginine dimethylaminohydrolase 2 ::Hydrolyzes N(G),N(G)-dimethyl-L-arginine (ADMA) and N(G)-monomethyl-L-arginine (MMA) which act as inhibitors of NOS. Has therefore a role in the regulation of nitric oxide generation.::Rattus norvegicus (taxid: 10116) portable COG1834::N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism] 99.78::17-123 PF02274::Amidinotransf 99.69::17-123 GO:1901605::alpha-amino acid metabolic process confident hh_2ci1_A_1::16-24,26-43,45-49,51-122 very confident psy945 344 Q91W29::Cytochrome c oxidase subunit 4 isoform 2, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Mus musculus (taxid: 10090) portable COG1834::N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism] 99.95::85-314 PF02936::COX4 100.00::201-343 GO:0031966::mitochondrial membrane confident hh_2y69_D_1::195-298,300-344 very confident psy12781 266 no hit no match COG1835::Predicted acyltransferases [Lipid metabolism] 99.93::35-228 PF01757::Acyl_transf_3 99.81::41-244 GO:0030421::defecation confident no hit no match psy10249 91 no hit no match COG1835::Predicted acyltransferases [Lipid metabolism] 98.31::25-77 PF01757::Acyl_transf_3 97.27::50-76 GO:0030421::defecation confident no hit no match psy986 71 Q2TBT7::Fragile X mental retardation syndrome-related protein 1 ::RNA-binding protein required for embryonic and postnatal development of muscle tissue. May regulate intracellular transport and local translation of certain mRNAs.::Bos taurus (taxid: 9913) confident COG1837::Predicted RNA-binding protein (contains KH domain) [General function prediction only] 99.39::3-39 PF13083::KH_4 98.35::5-39 GO:0003730::mRNA 3'-UTR binding confident hh_2qnd_A_1::2-48,51-66 very confident psy1312 213 P32100::60S ribosomal protein L7 ::Binds to G-rich structures in 28S rRNA and in mRNAs. Plays a regulatory role in the translation apparatus; inhibits cell-free translation of mRNAs.::Drosophila melanogaster (taxid: 7227) confident COG1841::RpmD Ribosomal protein L30/L7E [Translation, ribosomal structure and biogenesis] 98.95::104-145 PF08079::Ribosomal_L30_N 99.76::31-101 GO:0009507::chloroplast confident hh_4a17_V_1::27-213 very confident psy2389 172 P0ABJ4::Cytochrome o ubiquinol oxidase subunit 3 ::Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) very confident COG1845::CyoC Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion] 100.00::1-170 PF00510::COX3 100.00::1-170 GO:0009319::cytochrome o ubiquinol oxidase complex confident hh_1fft_C_1::1-171 very confident psy10887 222 O08600::Endonuclease G, mitochondrial ::Cleaves DNA at double-stranded (DG)n.(DC)n and at single-stranded (DC)n tracts. In addition to deoxyribonuclease activities, also has ribonuclease (RNase) and RNase H activities. Capable of generating the RNA primers required by DNA polymerase gamma to initiate replication of mitochondrial DNA.::Mus musculus (taxid: 10090) confident COG1864::NUC1 DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism] 100.00::2-221 PF01223::Endonuclease_NS 100.00::14-221 GO:0006401::RNA catabolic process confident hh_3ism_A_1::1-221 very confident psy4127 75 C5A6N2::tRNA (guanine(26)-N(2))-dimethyltransferase ::Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups.::Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) (taxid: 593117) confident COG1867::TRM1 N2,N2-dimethylguanosine tRNA methyltransferase [Translation, ribosomal structure and biogenesis] 100.00::2-75 PF02005::TRM 100.00::2-75 GO:0005634::nucleus confident hh_3axs_A_1::8-74 very confident psy13819 323 Q4WS33::Probable beta-galactosidase A ::Cleaves beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable COG1874::LacA Beta-galactosidase [Carbohydrate transport and metabolism] 99.97::77-251 PF01301::Glyco_hydro_35 100.00::82-322 GO:0005576::extracellular region confident hh_3thd_A_1::69-184,186-322 very confident psy12280 758 Q8IW92::Beta-galactosidase-1-like protein 2 ::::Homo sapiens (taxid: 9606) confident COG1874::LacA Beta-galactosidase [Carbohydrate transport and metabolism] 100.00::119-733 PF01301::Glyco_hydro_35 100.00::126-450 GO:0005615::extracellular space confident hh_3og2_A_1::110-122,125-187,191-232,234-266,268-281,285-366,368-408,419-449 very confident psy13824 226 P23780::Beta-galactosidase ::Cleaves beta-linked terminal galactosyl residues from gangliosides, glycoproteins, and glycosaminoglycans.::Mus musculus (taxid: 10090) confident COG1874::LacA Beta-galactosidase [Carbohydrate transport and metabolism] 99.92::118-226 PF01301::Glyco_hydro_35 100.00::123-226 GO:0005773::vacuole confident hh_3thd_A_1::111-217,219-226 very confident psy12907 949 P16278::Beta-galactosidase ::Isoform 2 has no beta-galactosidase catalytic activity, but plays functional roles in the formation of extracellular elastic fibers (elastogenesis) and in the development of connective tissue. Seems to be identical to the elastin-binding protein (EBP), a major component of the non-integrin cell surface receptor expressed on fibroblasts, smooth muscle cells, chondroblasts, leukocytes, and certain cancer cell types. In elastin producing cells, associates with tropoelastin intracellularly and functions as a recycling molecular chaperone which facilitates the secretions of tropoelastin and its assembly into elastic fibers.::Homo sapiens (taxid: 9606) portable COG1874::LacA Beta-galactosidase [Carbohydrate transport and metabolism] 100.00::178-463 PF01301::Glyco_hydro_35 100.00::183-494 GO:0016936::galactoside binding confident hh_3og2_A_1::171-284,286-287,289-353,355-463 very confident psy4844 254 P37202::Exosome complex exonuclease dis3 ::Catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and cryptic unstable transcripts (CUTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and in RNA surveillance pathways, preventing translation of aberrant mRNAs. The catalytic inactive RNA exosome core complex of 9 subunits (Exo-9) is proposed to play a pivotal role in the binding and presentation of RNA for ribonucleolysis, and to serve as a scaffold for the association with catalytic subunits and accessory proteins or complexes. DIS3 has both 3'-5' exonuclease and endonuclease activities. The exonuclease activity of DIS3 is down-regulated upon association with Exo-9 possibly involving a conformational change in the catalytic domain and threading of the RNA substrate through the complex central channel. Structured substrates can be degraded if they have a 3' single-stranded extension sufficiently long (such as 35 nt poly(A)) to span the proposed complex inner RNA-binding path and to reach the exonuclease site provided by dis3 (By similarity). Implicated in mitotic control. Essential for cell division and spore germination. May be involved in regulating protein dephosphorylation during mitosis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1875::NYN ribonuclease and ATPase of PhoH family domains [General function prediction only] 99.62::68-200 PF13638::PIN_4 99.65::71-195 GO:0031981::nuclear lumen confident hh_2wp8_J_1::6-39,41-60,62-253 very confident psy9704 116 A0QKN5::Trehalose-phosphate phosphatase ::Removes the phosphate from trehalose 6-phosphate to produce free trehalose.::Mycobacterium avium (strain 104) (taxid: 243243) portable COG1877::OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] 99.85::2-113 PF02358::Trehalose_PPase 99.91::2-113 GO:0005811::lipid particle confident hh_1u02_A_1::3-22,24-36,38-88,90-98,102-111 confident psy9708 99 no hit no match COG1877::OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] 99.41::2-95 PF02358::Trehalose_PPase 99.51::2-96 GO:0005811::lipid particle confident rp_1u02_A_1::13-20,24-93 portable psy6916 105 P13696::Phosphatidylethanolamine-binding protein 1 ::HCNP may be involved in the function of the presynaptic cholinergic neurons of the central nervous system. HCNP increases the production of choline acetyltransferase but not acetylcholinesterase. Seems to be mediated by a specific receptor.::Bos taurus (taxid: 9913) confident COG1881::Phospholipid-binding protein [General function prediction only] 99.75::18-105 PF01161::PBP 99.90::8-104 GO:0005576::extracellular region confident hh_2jyz_A_1::5-14,16-104 very confident psy15670 420 P13696::Phosphatidylethanolamine-binding protein 1 ::HCNP may be involved in the function of the presynaptic cholinergic neurons of the central nervous system. HCNP increases the production of choline acetyltransferase but not acetylcholinesterase. Seems to be mediated by a specific receptor.::Bos taurus (taxid: 9913) confident COG1881::Phospholipid-binding protein [General function prediction only] 99.67::302-413 PF01161::PBP 99.94::126-271 GO:0005634::nucleus confident hh_2jyz_A_1::114-233,235-286 very confident psy6923 113 P13696::Phosphatidylethanolamine-binding protein 1 ::HCNP may be involved in the function of the presynaptic cholinergic neurons of the central nervous system. HCNP increases the production of choline acetyltransferase but not acetylcholinesterase. Seems to be mediated by a specific receptor.::Bos taurus (taxid: 9913) portable COG1881::Phospholipid-binding protein [General function prediction only] 99.54::1-65 PF01161::PBP 99.83::1-93 GO:0005737::cytoplasm confident hh_2jyz_A_1::1-58,60-66,69-98 very confident psy14207 343 P13696::Phosphatidylethanolamine-binding protein 1 ::HCNP may be involved in the function of the presynaptic cholinergic neurons of the central nervous system. HCNP increases the production of choline acetyltransferase but not acetylcholinesterase. Seems to be mediated by a specific receptor.::Bos taurus (taxid: 9913) confident COG1881::Phospholipid-binding protein [General function prediction only] 99.56::189-291 PF01161::PBP 99.91::26-177 GO:0043679::axon terminus confident hh_2jyz_A_2::189-224,231-293,295-337 very confident psy11040 346 P13696::Phosphatidylethanolamine-binding protein 1 ::HCNP may be involved in the function of the presynaptic cholinergic neurons of the central nervous system. HCNP increases the production of choline acetyltransferase but not acetylcholinesterase. Seems to be mediated by a specific receptor.::Bos taurus (taxid: 9913) portable COG1881::Phospholipid-binding protein [General function prediction only] 99.10::159-290 PF01161::PBP 99.89::148-330 GO:0043679::axon terminus confident hh_2jyz_A_1::136-200,234-235,240-292,294-345 very confident psy15669 167 Q8MK67::Phosphatidylethanolamine-binding protein 1 ::HCNP may be involved in the function of the presynaptic cholinergic neurons of the central nervous system. HCNP increases the production of choline acetyltransferase but not acetylcholinesterase. Seems to be mediated by a specific receptor.::Oryctolagus cuniculus (taxid: 9986) confident COG1881::Phospholipid-binding protein [General function prediction only] 99.69::2-72 PF01161::PBP 99.94::2-75 GO:0043679::axon terminus confident hh_2jyz_A_1::2-74,76-83,123-167 very confident psy11011 134 P97351::40S ribosomal protein S3a ::May play a role during erythropoiesis through regulation of transcription factor DDIT3.::Mus musculus (taxid: 10090) confident COG1890::RPS1A Ribosomal protein S3AE [Translation, ribosomal structure and biogenesis] 100.00::14-118 PF01015::Ribosomal_S3Ae 100.00::1-132 GO:0005618::cell wall confident hh_3u5c_B_1::1-43,46-132 very confident psy11013 176 P97351::40S ribosomal protein S3a ::May play a role during erythropoiesis through regulation of transcription factor DDIT3.::Mus musculus (taxid: 10090) confident COG1890::RPS1A Ribosomal protein S3AE [Translation, ribosomal structure and biogenesis] 100.00::10-149 PF01015::Ribosomal_S3Ae 100.00::10-136 GO:0044763::single-organism cellular process confident hh_3u5c_B_1::10-43,49-150,155-163,167-176 very confident psy11033 251 P49821::NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Homo sapiens (taxid: 9606) confident COG1894::NuoF NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion] 100.00::1-250 PF01512::Complex1_51K 99.92::47-174 GO:0005747::mitochondrial respiratory chain complex I confident hh_3i9v_1_1::47-230,234-248 very confident psy2937 257 P87242::HD domain-containing protein C4G3.17 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1896::Predicted hydrolases of HD superfamily [General function prediction only] 99.78::1-165 PF13023::HD_3 99.93::1-153 GO:0043231::intracellular membrane-bounded organelle confident hh_4dmb_A_1::1-14,18-41,80-119,179-243,245-248 very confident psy4459 400 Q6FRN2::Deoxyhypusine synthase ::Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident COG1899::DYS1 Deoxyhypusine synthase [Posttranslational modification, protein turnover, chaperones] 100.00::20-374 PF01916::DS 100.00::20-372 GO:0005829::cytosol confident hh_1rlz_A_1::4-12,14-98,113-171,244-373 very confident psy8528 240 Q20719::Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Caenorhabditis elegans (taxid: 6239) confident COG1905::NuoE NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion] 100.00::45-182 PF01257::2Fe-2S_thioredx 100.00::56-179 GO:0030964::NADH dehydrogenase complex confident hh_3i9v_2_1::46-121,130-185 very confident psy16179 145 P52808::60S ribosomal protein L30-1 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1911::RPL30 Ribosomal protein L30E [Translation, ribosomal structure and biogenesis] 99.98::47-139 PF01248::Ribosomal_L7Ae 99.75::47-138 GO:0022625::cytosolic large ribosomal subunit very confident hh_3vi6_A_1::47-62,70-142 very confident psy12290 530 Q5RES1::Matrix metalloproteinase-14 ::Seems to specifically activate progelatinase A. May thus trigger invasion by tumor cells by activating progelatinase A on the tumor cell surface (By similarity). May be involved in actin cytoskeleton reorganization by cleaving PTK7.::Pongo abelii (taxid: 9601) portable COG1913::Predicted Zn-dependent proteases [General function prediction only] 93.01::22-46 PF00045::Hemopexin 99.26::334-381 GO:0008233::peptidase activity confident hh_3c7x_A_1::232-283,287-329,332-373,375-429 very confident psy1606 285 Q61824::Disintegrin and metalloproteinase domain-containing protein 12 ::Involved in skeletal muscle regeneration, specifically at the onset of cell fusion. Also involved in macrophage-derived giant cells (MGC) and osteoclast formation from mononuclear precursors.::Mus musculus (taxid: 10090) portable COG1913::Predicted Zn-dependent proteases [General function prediction only] 97.93::215-270 PF01421::Reprolysin 100.00::85-281 GO:0005509::calcium ion binding confident hh_3b8z_A_1::83-104,108-209,213-283 very confident psy14250 154 Q8TE57::A disintegrin and metalloproteinase with thrombospondin motifs 16 ::::Homo sapiens (taxid: 9606) portable COG1913::Predicted Zn-dependent proteases [General function prediction only] 97.16::37-94 PF01421::Reprolysin 99.92::4-114 GO:0005578::proteinaceous extracellular matrix confident hh_2rjp_A_1::3-18,25-33,35-58,68-125,127-151 very confident psy14093 857 Q54MG6::60S ribosomal protein L37 ::Binds to the 23S rRNA.::Dictyostelium discoideum (taxid: 44689) confident COG1913::Predicted Zn-dependent proteases [General function prediction only] 93.93::349-386 PF01421::Reprolysin 99.97::95-422 GO:0022625::cytosolic large ribosomal subunit confident hh_2i47_A_1::92-142,147-164,185-186,223-234,237-303,305-307,318-318,324-337,339-400,408-434,437-444 very confident psy1605 718 Q9JLN6::Disintegrin and metalloproteinase domain-containing protein 28 ::May play a role in organogenesis and organ-specific functions such as thymic T-cell development.::Mus musculus (taxid: 10090) portable COG1913::Predicted Zn-dependent proteases [General function prediction only] 91.22::43-72 PF08516::ADAM_CR 99.79::165-265 GO:0008237::metallopeptidase activity confident hh_3k7n_A_1::18-107,127-219,222-239 very confident psy3235 149 Q9FN18::Metal transporter Nramp4 ::Vacuolar metal transporter involved in intracellular metal homeostasis. Can transport iron (Fe), manganese (Mn) and cadmium (Cd). Regulates metal accumulation under Fe starvation. Acts redundantly with NRAMP3 to mobilize vacuolar Fe and provide sufficient Fe during seed germination. In association with NRAMP3, required for optimal growth and photosynthesis under Mn deficiency. Exports Mn from vacuoles in leaf mesophyll cells, making Mn available for functional photosystem II in chloroplasts.::Arabidopsis thaliana (taxid: 3702) portable COG1914::MntH Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism] 99.28::3-69 no hit no match GO:0042221::response to chemical stimulus confident no hit no match psy13309 1568 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident COG1928::PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] 95.22::49-187 PF01365::RYDR_ITPR 99.97::331-539 GO:0005875::microtubule associated complex confident hh_2xoa_A_1::1-92,99-99,102-107,113-216,218-264,266-433,436-452 very confident psy17901 218 Q54P23::Stromal cell-derived factor 2-like protein ::::Dictyostelium discoideum (taxid: 44689) confident COG1928::PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] 100.00::11-153 PF02815::MIR 99.94::29-150 GO:0005783::endoplasmic reticulum confident hh_3mal_A_1::7-136,138-155 very confident psy827 2693 P11881::Inositol 1,4,5-trisphosphate receptor type 1 ::Intracellular channel that mediates calcium release from the endoplasmic reticulum following stimulation by inositol 1,4,5-trisphosphate.::Mus musculus (taxid: 10090) confident COG1928::PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones] 99.48::177-322 PF08709::Ins145_P3_rec 100.00::7-232 GO:0016020::membrane confident hh_1n4k_A_1::229-475,478-518,521-595 very confident psy8733 621 Q7VZG4::Phosphoserine aminotransferase ::Catalyzes the reversible conversion of 3-phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4-phosphonooxybutanoate to phosphohydroxythreonine.::Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) (taxid: 257313) portable COG1932::SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism] 100.00::50-610 PF00266::Aminotran_5 100.00::52-431 GO:0044444::cytoplasmic part confident hh_3e77_A_1::52-126,158-201,234-236,259-432,488-490,492-492,550-610 very confident psy6661 172 Q8VCP8::Adenylate kinase isoenzyme 6 ::Broad activity as an NMP kinase. AMP and dAMP are the preferred substrates of all tested NMPs, but CMP and dCMP are also good substrates. IMP can be phosphorylated, but to a much lesser extent. Adenylate and cytidylate can serve as phosphate acceptors.::Mus musculus (taxid: 10090) very confident COG1936::Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism] 99.97::8-167 PF01202::SKI 99.71::16-169 GO:0005829::cytosol confident hh_3iij_A_1::4-32,34-171 very confident psy2936 174 Q18785::MIF-like protein mif-2 ::::Caenorhabditis elegans (taxid: 6239) confident COG1942::Uncharacterized protein, 4-oxalocrotonate tautomerase homolog [General function prediction only] 98.91::59-117 PF01187::MIF 100.00::2-115 GO:0043518::negative regulation of DNA damage response, signal transduction by p53 class mediator confident hh_1uiz_A_1::1-14,16-115 very confident psy11328 410 Q24087::DNA repair endonuclease XPF ::Implicated in recombination events during meiosis, mostly in meiotic exchange. May directly resolve Holliday junctions within recombination intermediates leading to DNA exchange. Also required for the repair of mismatches within meiotic heteroduplex DNA and for nucleotide excision repair.::Drosophila melanogaster (taxid: 7227) portable COG1948::MUS81 ERCC4-type nuclease [DNA replication, recombination, and repair] 100.00::96-404 PF02732::ERCC4 99.89::102-260 GO:0043234::protein complex confident hh_2bgw_A_1::95-182,189-190,194-196,225-239,241-264,266-280,284-300,356-403 very confident psy13232 111 Q39IC7::Oligoribonuclease ::3'-to-5' exoribonuclease specific for small oligoribonucleotides.::Burkholderia sp. (strain 383) (taxid: 269483) portable COG1949::Orn Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification] 100.00::2-108 PF00929::RNase_T 94.81::3-105 GO:0005634::nucleus confident hh_3tr8_A_1::3-15,20-107 very confident psy3766 470 P0AC34::Fumarate hydratase class I, aerobic ::It functions as an aerobic enzyme in the citric acid cycle. It accounts for about 80% of the fumarase activity when the bacteria grows aerobically.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) confident COG1951::TtdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion] 100.00::1-266 PF05681::Fumerase 100.00::1-250 GO:0004333::fumarate hydratase activity confident hh_2isb_A_1::279-283,285-394,396-452 very confident psy3775 440 P0AC34::Fumarate hydratase class I, aerobic ::It functions as an aerobic enzyme in the citric acid cycle. It accounts for about 80% of the fumarase activity when the bacteria grows aerobically.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) confident COG1951::TtdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion] 100.00::1-266 PF05681::Fumerase 100.00::1-250 GO:0004333::fumarate hydratase activity confident hh_2isb_A_1::278-283,285-394,396-440 very confident psy3773 578 Q58690::Putative fumarate hydratase subunit alpha ::::Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) portable COG1951::TtdA Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion] 100.00::1-253 PF05681::Fumerase 100.00::1-250 GO:0043566::structure-specific DNA binding confident hh_2f1l_A_1::400-443,446-494,496-541,549-578 very confident psy14372 210 O77746::cGMP-specific 3',5'-cyclic phosphodiesterase ::Plays a role in signal transduction by regulating the intracellular concentration of cyclic nucleotides. This phosphodiesterase catalyzes the specific hydrolysis of cGMP to 5'-GMP.::Canis familiaris (taxid: 9615) portable COG1956::GAF domain-containing protein [Signal transduction mechanisms] 98.12::30-128 PF01590::GAF 97.90::45-130 GO:0030551::cyclic nucleotide binding confident hh_3ibj_A_1::44-73,78-159,164-170,172-180,182-194 very confident psy17834 325 B6I163::Pyrimidine-specific ribonucleoside hydrolase RihA ::Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively.::Escherichia coli (strain SE11) (taxid: 409438) confident COG1957::URH1 Inosine-uridine nucleoside N-ribohydrolase [Nucleotide transport and metabolism] 100.00::4-324 PF01156::IU_nuc_hydro 100.00::5-324 GO:0047724::inosine nucleosidase activity confident hh_1q8f_A_1::3-30,34-61,63-83,87-87,91-104,107-107,109-112,114-118,120-173,175-198,200-221,223-242,244-273,275-324 very confident psy5557 213 P87173::U6 snRNA-associated Sm-like protein LSm1 ::Binds specifically to the 3'-terminal U-tract of U6 snRNA.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.77::107-177 PF01423::LSM 99.80::109-177 GO:0000932::cytoplasmic mRNA processing body confident hh_1n9r_A_1::106-152,154-155,158-179 confident psy9934 158 P62306::Small nuclear ribonucleoprotein F ::Appears to function in the U7 snRNP complex that is involved in histone 3'-end processing. Associated with snRNP U1, U2, U4/U6 and U5.::Homo sapiens (taxid: 9606) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.81::5-75 PF01423::LSM 99.78::82-146 GO:0005683::U7 snRNP confident hh_3s6n_F_1::75-158 very confident psy6372 88 P62306::Small nuclear ribonucleoprotein F ::Appears to function in the U7 snRNP complex that is involved in histone 3'-end processing. Associated with snRNP U1, U2, U4/U6 and U5.::Homo sapiens (taxid: 9606) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.89::3-76 PF01423::LSM 99.89::11-76 GO:0005683::U7 snRNP very confident hh_3s6n_F_1::1-2,5-88 very confident psy14196 79 P62318::Small nuclear ribonucleoprotein Sm D3 ::Appears to function in the U7 snRNP complex that is involved in histone 3'-end processing. Binds to the downstream cleavage product (DCP) of histone pre-mRNA in a U7 snRNP dependent manner.::Homo sapiens (taxid: 9606) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.69::3-77 PF01423::LSM 99.64::8-77 GO:0005683::U7 snRNP confident bp_1d3b_A_1::1-53 very confident psy17024 132 Q17348::Small nuclear ribonucleoprotein Sm D3 ::Required for pre-mRNA splicing. Required for snRNP biogenesis.::Caenorhabditis elegans (taxid: 6239) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.82::3-72 PF01423::LSM 99.83::8-73 GO:0005683::U7 snRNP very confident no hit no match psy11512 62 Q9VXE0::Probable small nuclear ribonucleoprotein G ::Associated with snRNP U1, U2, U4/U6 and U5.::Drosophila melanogaster (taxid: 7227) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.74::7-49 PF01423::LSM 99.75::8-61 GO:0005683::U7 snRNP very confident hh_3s6n_G_1::1-61 very confident psy10748 98 A4FUI2::Small nuclear ribonucleoprotein E ::Appears to function in the U7 snRNP complex that is involved in histone 3'-end processing. Associated with snRNP U1, U2, U4/U6 and U5.::Bos taurus (taxid: 9913) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.84::14-90 PF01423::LSM 99.83::20-90 GO:0005829::cytosol very confident hh_3s6n_E_1::10-92 very confident psy10835 80 P62313::U6 snRNA-associated Sm-like protein LSm6 ::Component of LSm protein complexes, which are involved in RNA processing and may function in a chaperone-like manner, facilitating the efficient association of RNA processing factors with their substrates. Component of the cytoplasmic LSM1-LSM7 complex, which is thought to be involved in mRNA degradation by activating the decapping step in the 5'-to-3' mRNA decay pathway. Component of the nuclear LSM2-LSM8 complex, which is involved in splicing of nuclear mRNAs. LSM2-LSM8 associates with multiple snRNP complexes containing the U6 snRNA (U4/U6 di-snRNP, U4/U6.U5 tri-snRNP, and free U6 snRNP). It binds directly to the 3'-terminal U-tract of U6 snRNA and plays a role in the biogenesis and stability of the U6 snRNP and U4/U6 snRNP complexes. LSM2-LSM8 probably also is involved degradation of nuclear pre-mRNA by targeting them for decapping, and in processing of pre-tRNAs, pre-rRNAs and U3 snoRNA.::Mus musculus (taxid: 10090) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.88::3-74 PF01423::LSM 99.87::9-74 GO:0005829::cytosol very confident hh_4emk_B_1::5-77 very confident psy1175 155 Q9LGE6::Probable U6 snRNA-associated Sm-like protein LSm4 ::Binds specifically to the 3'-terminal U-tract of U6 snRNA.::Oryza sativa subsp. japonica (taxid: 39947) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.57::1-57 PF01423::LSM 99.63::1-57 GO:0005829::cytosol confident no hit no match psy11157 111 Q9VI10::Probable small nuclear ribonucleoprotein Sm D2 ::Required for pre-mRNA splicing. Required for snRNP biogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.85::17-104 PF01423::LSM 99.83::24-104 GO:0005829::cytosol very confident hh_1b34_B_1::3-111 very confident psy1084 110 Q9VI10::Probable small nuclear ribonucleoprotein Sm D2 ::Required for pre-mRNA splicing. Required for snRNP biogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.86::16-103 PF01423::LSM 99.83::22-103 GO:0005829::cytosol very confident hh_1b34_B_1::4-109 very confident psy15782 129 Q9VU02::Probable small nuclear ribonucleoprotein Sm D1 ::Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures.::Drosophila melanogaster (taxid: 7227) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.72::2-66 PF01423::LSM 99.78::2-67 GO:0005829::cytosol very confident no hit no match psy6026 98 O35900::U6 snRNA-associated Sm-like protein LSm2 ::Binds specifically to the 3'-terminal U-tract of U6 snRNA. May be involved in pre-mRNA splicing.::Mus musculus (taxid: 10090) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.86::3-75 PF01423::LSM 99.86::9-75 GO:0019901::protein kinase binding very confident hh_4emh_A_1::4-55,57-93 very confident psy1222 60 Q9D2U5::LSM domain-containing protein 1 ::Component of the N-terminal acetyltransferase C (NatC) complex which may catalyze acetylation of N-terminal methionine residues.::Mus musculus (taxid: 10090) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.67::1-59 PF01423::LSM 99.69::1-59 GO:0030532::small nuclear ribonucleoprotein complex confident hh_1d3b_B_1::1-38,40-60 very confident psy10177 116 P87173::U6 snRNA-associated Sm-like protein LSm1 ::Binds specifically to the 3'-terminal U-tract of U6 snRNA.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.66::1-58 PF01423::LSM 99.62::2-58 GO:0033962::cytoplasmic mRNA processing body assembly very confident hh_1i4k_A_1::1-34,38-61 very confident psy9158 133 Q969L4::U7 snRNA-associated Sm-like protein LSm10 ::Appears to function in the U7 snRNP complex that is involved in histone 3'-end processing. Increases U7 snRNA levels but not histone 3'-end pre-mRNA processing activity, when overexpressed. Required for cell cycle progression from G1 to S phases. Binds specifically to U7 snRNA. Binds to the downstream cleavage product (DCP) of histone pre-mRNA in a U7 snRNP dependent manner.::Homo sapiens (taxid: 9606) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.56::17-75 PF01423::LSM 99.69::20-76 GO:0035363::histone locus body confident hh_1b34_A_1::18-89 very confident psy800 204 Q2HJH0::U6 snRNA-associated Sm-like protein LSm5 ::Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro.::Bos taurus (taxid: 9913) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.79::115-188 PF01423::LSM 99.76::120-188 GO:0040020::regulation of meiosis confident hh_1ljo_A_1::115-162,166-190 very confident psy1140 142 Q3ZCE0::N-alpha-acetyltransferase 38, NatC auxiliary subunit ::Binds specifically to the 3'-terminal U-tract of U6 snRNA.::Bos taurus (taxid: 9913) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.59::3-61 PF01423::LSM 99.60::2-61 GO:0071011::precatalytic spliceosome confident hh_4emk_C_1::3-74 very confident psy3154 101 P62311::U6 snRNA-associated Sm-like protein LSm3 ::Binds specifically to the 3'-terminal U-tract of U6 snRNA.::Mus musculus (taxid: 10090) very confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.85::11-94 PF01423::LSM 99.85::16-94 GO:0071013::catalytic step 2 spliceosome very confident hh_3bw1_A_1::10-65,72-99 very confident psy17123 105 Q9CQQ8::U6 snRNA-associated Sm-like protein LSm7 ::Binds specifically to the 3'-terminal U-tract of U6 snRNA.::Mus musculus (taxid: 10090) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 99.83::20-92 PF01423::LSM 99.86::25-93 GO:0071013::catalytic step 2 spliceosome confident hh_4emk_C_1::11-98 very confident psy488 86 Q9H840::Gem-associated protein 7 ::The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus.::Homo sapiens (taxid: 9606) confident COG1958::LSM1 Small nuclear ribonucleoprotein (snRNP) homolog [Transcription] 91.60::21-85 PF11095::Gemin7 100.00::8-86 GO:0016604::nuclear body confident hh_1y96_B_1::5-72,74-86 very confident psy2177 677 P50544::Very long-chain specific acyl-CoA dehydrogenase, mitochondrial ::Active toward esters of long-chain and very long chain fatty acids such as palmitoyl-CoA, mysritoyl-CoA and stearoyl-CoA. Can accommodate substrate acyl chain lengths as long as 24 carbons, but shows little activity for substrates of less than 12 carbons.::Mus musculus (taxid: 10090) very confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.00::82-498 PF00441::Acyl-CoA_dh_1 99.88::306-498 GO:0004466::long-chain-acyl-CoA dehydrogenase activity confident hh_2uxw_A_1::44-423,437-437,463-471,477-478,484-498,506-676 very confident psy2287 268 Q9R0H0::Peroxisomal acyl-coenzyme A oxidase 1 ::Catalyzes the desaturation of acyl-CoAs to 2-trans-enoyl-CoAs. Isoform 1 shows highest activity against medium-chain fatty acyl-CoAs and activity decreases with increasing chain length. Isoform 2 is active against a much broader range of substrates and shows activity towards very long-chain acyl-CoAs.::Mus musculus (taxid: 10090) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.97::3-225 PF00441::Acyl-CoA_dh_1 99.91::48-222 GO:0005504::fatty acid binding confident hh_1w07_A_1::2-61,67-73,76-267 very confident psy12318 392 P12007::Isovaleryl-CoA dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) very confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.00::7-391 PF00441::Acyl-CoA_dh_1 99.92::239-388 GO:0005759::mitochondrial matrix very confident hh_1ivh_A_1::3-392 very confident psy1771 217 Q63448::Peroxisomal acyl-coenzyme A oxidase 3 ::Oxidizes the CoA-esters of 2-methyl-branched fatty acids.::Rattus norvegicus (taxid: 10116) portable COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.97::1-217 PF00441::Acyl-CoA_dh_1 99.78::71-217 GO:0005777::peroxisome confident rp_1w07_A_1::7-26,28-66,71-119,125-174,181-217 very confident psy7726 96 Q9DBS4::Acyl-coenzyme A oxidase-like protein ::::Mus musculus (taxid: 10090) portable COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.55::1-96 PF00441::Acyl-CoA_dh_1 98.94::35-95 GO:0005777::peroxisome confident hh_1w07_A_1::1-32,37-96 very confident psy5138 575 Q9DBL1::Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial ::Has greatest activity toward short branched chain acyl-CoA derivative such as (s)-2-methylbutyryl-CoA, isobutyryl-CoA, and 2-methylhexanoyl-CoA as well as toward short straight chain acyl-CoAs such as butyryl-CoA and hexanoyl-CoA. Can use valproyl-CoA as substrate and may play a role in controlling the metabolic flux of valproic acid in the development of toxicity of this agent.::Mus musculus (taxid: 10090) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.00::217-574 PF00441::Acyl-CoA_dh_1 99.88::389-570 GO:0006635::fatty acid beta-oxidation confident hh_2jif_A_1::214-223,226-277,279-497,530-573 very confident psy13265 245 P52042::Acyl-CoA dehydrogenase, short-chain specific ::::Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (taxid: 272562) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.00::2-243 PF00441::Acyl-CoA_dh_1 99.90::107-239 GO:0030424::axon confident hh_1egd_A_1::2-243 very confident psy10337 87 Q3SZB4::Medium-chain specific acyl-CoA dehydrogenase, mitochondrial ::This enzyme is specific for acyl chain lengths of 4 to 16.::Bos taurus (taxid: 9913) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.57::19-86 PF00441::Acyl-CoA_dh_1 99.70::12-83 GO:0030424::axon confident hh_1egd_A_1::14-86 very confident psy1215 260 P16219::Short-chain specific acyl-CoA dehydrogenase, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.00::2-259 PF00441::Acyl-CoA_dh_1 99.76::144-259 GO:0033539::fatty acid beta-oxidation using acyl-CoA dehydrogenase confident hh_2vig_A_1::1-259 very confident psy9220 464 P81140::Glutaryl-CoA dehydrogenase, mitochondrial (Fragment) ::Catalyzes the oxidative decarboxylation of glutaryl-CoA to crotonyl-CoA and CO(2) in the degradative pathway of L-lysine, L-hydroxylysine, and L-tryptophan metabolism. It uses electron transfer flavoprotein as its electron acceptor.::Sus scrofa (taxid: 9823) very confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.00::26-463 PF00441::Acyl-CoA_dh_1 99.89::312-459 GO:0050660::flavin adenine dinucleotide binding confident hh_1siq_A_1::15-60,62-78,80-154,174-218,262-464 very confident psy1303 206 P16219::Short-chain specific acyl-CoA dehydrogenase, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 100.00::2-206 PF02770::Acyl-CoA_dh_M 99.69::44-95 GO:0005829::cytosol confident hh_2vig_A_1::2-206 very confident psy5140 120 Q9DBL1::Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial ::Has greatest activity toward short branched chain acyl-CoA derivative such as (s)-2-methylbutyryl-CoA, isobutyryl-CoA, and 2-methylhexanoyl-CoA as well as toward short straight chain acyl-CoAs such as butyryl-CoA and hexanoyl-CoA. Can use valproyl-CoA as substrate and may play a role in controlling the metabolic flux of valproic acid in the development of toxicity of this agent.::Mus musculus (taxid: 10090) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.84::1-120 PF02770::Acyl-CoA_dh_M 99.80::52-103 GO:0005829::cytosol confident hh_2jif_A_1::1-115,117-120 very confident psy10338 312 P52042::Acyl-CoA dehydrogenase, short-chain specific ::::Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (taxid: 272562) portable COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.84::46-306 PF02770::Acyl-CoA_dh_M 99.68::253-303 GO:0016627::oxidoreductase activity, acting on the CH-CH group of donors confident hh_1egd_A_1::45-102,217-306 very confident psy1218 136 P16219::Short-chain specific acyl-CoA dehydrogenase, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.94::1-135 PF02770::Acyl-CoA_dh_M 99.78::81-135 GO:0033539::fatty acid beta-oxidation using acyl-CoA dehydrogenase confident hh_2vig_A_1::1-68,72-97,102-135 very confident psy5139 216 P52042::Acyl-CoA dehydrogenase, short-chain specific ::::Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (taxid: 272562) portable COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.77::2-216 PF02771::Acyl-CoA_dh_N 99.36::2-72 GO:0003995::acyl-CoA dehydrogenase activity confident hh_3owa_A_1::2-36,38-96,99-160,171-180,185-215 very confident psy1305 68 P16219::Short-chain specific acyl-CoA dehydrogenase, mitochondrial ::::Homo sapiens (taxid: 9606) confident COG1960::CaiA Acyl-CoA dehydrogenases [Lipid metabolism] 99.17::2-68 PF02771::Acyl-CoA_dh_N 99.75::1-68 GO:0033539::fatty acid beta-oxidation using acyl-CoA dehydrogenase confident hh_2vig_A_1::2-68 very confident psy10962 196 D3ZYW7::Frataxin, mitochondrial ::Promotes the biosynthesis of heme and assembly and repair of iron-sulfur clusters by delivering Fe(2+) to proteins involved in these pathways. May play a role in the protection against iron-catalyzed oxidative stress through its ability to catalyze the oxidation of Fe(2+) to Fe(3+); the oligomeric form but not the monomeric form has in vitro ferroxidase activity. May be able to store large amounts of iron in the form of a ferrihydrite mineral by oligomerization. Modulates the RNA-binding activity of ACO1.::Rattus norvegicus (taxid: 10116) confident COG1965::CyaY Protein implicated in iron transport, frataxin homolog [Inorganic ion transport and metabolism] 100.00::73-185 PF01491::Frataxin_Cyay 100.00::73-185 GO:0055114::oxidation-reduction process confident hh_3t3l_A_1::70-154,157-185,187-195 very confident psy10535 591 O32115::Uncharacterized transporter YutK ::::Bacillus subtilis (strain 168) (taxid: 224308) confident COG1972::NupC Nucleoside permease [Nucleotide transport and metabolism] 100.00::189-591 PF07662::Nucleos_tra2_C 100.00::381-591 GO:0001895::retina homeostasis confident hh_3tij_A_1::187-268,270-591 very confident psy3572 245 O55135::Eukaryotic translation initiation factor 6 ::Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May behave as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (GNB2L1)-dependent protein kinase C activity.::Mus musculus (taxid: 10090) very confident COG1976::TIF6 Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis] 100.00::1-224 PF01912::eIF-6 100.00::3-204 GO:0005829::cytosol very confident hh_4a18_J_1::1-244 very confident psy3570 184 O55135::Eukaryotic translation initiation factor 6 ::Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May behave as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (GNB2L1)-dependent protein kinase C activity.::Mus musculus (taxid: 10090) very confident COG1976::TIF6 Translation initiation factor 6 (eIF-6) [Translation, ribosomal structure and biogenesis] 100.00::1-163 PF01912::eIF-6 100.00::1-143 GO:0005829::cytosol very confident hh_4a18_J_1::1-183 very confident psy2244 73 Q3ZBC0::DNA-directed RNA polymerases I, II, and III subunit RPABC4 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and a small RNAs, such as 5S rRNA and tRNAs, respectively.::Bos taurus (taxid: 9913) confident COG1996::RPC10 DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger) [Transcription] 99.66::14-58 PF03604::DNA_RNApol_7kD 99.75::18-49 GO:0005665::DNA-directed RNA polymerase II, core complex confident hh_3h0g_L_1::9-58 very confident psy838 152 P0CX26::60S ribosomal protein L43-B ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1997::RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis] 99.84::1-45 PF01780::Ribosomal_L37ae 99.88::2-45 GO:0022625::cytosolic large ribosomal subunit confident hh_3jyw_9_1::11-45 very confident psy836 122 P0CX26::60S ribosomal protein L43-B ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG1997::RPL43A Ribosomal protein L37AE/L43A [Translation, ribosomal structure and biogenesis] 100.00::6-119 PF01780::Ribosomal_L37ae 100.00::7-121 GO:0022625::cytosolic large ribosomal subunit very confident hh_3jyw_9_1::16-62,88-111 very confident psy15072 97 P59233::Ubiquitin-40S ribosomal protein S27a-3 ::Ribosomal protein RSP27a-3 is a component of the 40S subunit of the ribosome.::Arabidopsis thaliana (taxid: 3702) confident COG1998::RPS31 Ribosomal protein S27AE [Translation, ribosomal structure and biogenesis] 99.94::1-53 PF01599::Ribosomal_S27 99.97::3-49 GO:0005794::Golgi apparatus confident hh_3u5c_f_1::3-53 very confident psy17586 106 A1A4J8::Protein SCO1 homolog, mitochondrial ::Thought to play a role in cellular copper homeostasis, mitochondrial redox signaling or insertion of copper into the active site of COX.::Bos taurus (taxid: 9913) confident COG1999::Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only] 99.17::7-78 PF02630::SCO1-SenC 98.55::10-61 GO:0005739::mitochondrion confident hh_2ggt_A_1::22-30,32-79 very confident psy17592 183 Q92H76::SCO2-like protein RC0895 ::::Rickettsia conorii (strain ATCC VR-613 / Malish 7) (taxid: 272944) confident COG1999::Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems [General function prediction only] 99.95::64-182 PF02630::SCO1-SenC 99.95::59-177 GO:0060361::flight confident hh_2rli_A_1::61-176 very confident psy397 202 P62849::40S ribosomal protein S24 ::Required for processing of pre-rRNA and maturation of 40S ribosomal subunits.::Mus musculus (taxid: 10090) confident COG2004::RPS24A Ribosomal protein S24E [Translation, ribosomal structure and biogenesis] 100.00::10-101 PF01282::Ribosomal_S24e 99.98::28-105 GO:0034101::erythrocyte homeostasis confident hh_3iz6_U_1::6-104 very confident psy15650 211 P62243::40S ribosomal protein S8 ::::Rattus norvegicus (taxid: 10116) confident COG2007::RPS8A Ribosomal protein S8E [Translation, ribosomal structure and biogenesis] 99.95::1-59 PF01201::Ribosomal_S8e 100.00::2-63 GO:0009790::embryo development confident hh_2xzm_2_1::2-82,130-144,146-186 very confident psy11719 657 Q9CR47::Ribosome biogenesis protein NSA2 homolog ::Involved in the biogenesis of the 60S ribosomal subunit. May play a part in the quality control of pre-60S particles.::Mus musculus (taxid: 10090) confident COG2007::RPS8A Ribosomal protein S8E [Translation, ribosomal structure and biogenesis] 100.00::331-590 PF01201::Ribosomal_S8e 100.00::331-589 GO:0030687::preribosome, large subunit precursor confident hh_2kco_A_1::496-553,563-564,571-590 confident psy15462 71 O13940::Probable low-specificity L-threonine aldolase ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG2008::GLY1 Threonine aldolase [Amino acid transport and metabolism] 99.89::1-71 PF01212::Beta_elim_lyase 99.89::2-70 GO:0004793::threonine aldolase activity confident hh_1jg8_A_1::2-70 very confident psy5413 285 P37303::Low specificity L-threonine aldolase ::Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2008::GLY1 Threonine aldolase [Amino acid transport and metabolism] 99.98::68-284 PF01212::Beta_elim_lyase 99.98::70-284 GO:0044710::single-organism metabolic process confident rp_1jg8_A_1::69-141,143-160,167-180,182-195,197-285 very confident psy9435 106 P35720::Succinate dehydrogenase cytochrome b560 subunit, mitochondrial ::Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).::Bos taurus (taxid: 9913) portable COG2009::SdhC Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Energy production and conversion] 99.06::52-83 PF01127::Sdh_cyt 98.91::50-104 GO:0005739::mitochondrion confident hh_1zoy_C_1::40-105 very confident psy9433 105 Q68XP1::Succinate dehydrogenase cytochrome b556 subunit ::Membrane-anchoring subunit of succinate dehydrogenase (SDH).::Rickettsia typhi (strain ATCC VR-144 / Wilmington) (taxid: 257363) confident COG2009::SdhC Succinate dehydrogenase/fumarate reductase, cytochrome b subunit [Energy production and conversion] 99.85::1-102 PF01127::Sdh_cyt 99.74::2-101 GO:0006979::response to oxidative stress confident hh_3vr8_C_1::1-104 very confident psy5290 536 Q2T9T3::DNA-directed RNA polymerases I, II, and III subunit RPABC1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non-coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. Pol II is the central component of the basal RNA polymerase II transcription machinery. Pols are composed of mobile elements that move relative to each other. In Pol II, POLR2E/RPB5 is part of the lower jaw surrounding the central large cleft and thought to grab the incoming DNA template. Seems to be the major component in this process.::Bos taurus (taxid: 9913) confident COG2012::RPB5 DNA-directed RNA polymerase, subunit H, RpoH/RPB5 [Transcription] 99.84::115-180 PF03871::RNA_pol_Rpb5_N 99.87::1-78 GO:0005665::DNA-directed RNA polymerase II, core complex confident hh_3h0g_E_1::1-31,34-162,166-181 very confident psy15688 70 P89886::Translation machinery-associated protein 20 ::Involved in translation.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG2016::Predicted RNA-binding protein (contains PUA domain) [Translation, ribosomal structure and biogenesis] 99.89::1-68 PF01472::PUA 99.61::1-59 GO:0005840::ribosome confident hh_3r90_A_1::1-70 very confident psy5515 644 Q96C23::Aldose 1-epimerase ::Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose.::Homo sapiens (taxid: 9606) portable COG2017::GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] 100.00::98-483 PF01263::Aldose_epim 100.00::104-480 GO:0005576::extracellular region confident hh_1snz_A_1::85-92,98-111,114-146,184-188,190-225,240-249,251-280,284-358,396-465,467-482 very confident psy11898 124 Q96C23::Aldose 1-epimerase ::Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose.::Homo sapiens (taxid: 9606) confident COG2017::GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] 99.79::10-106 PF01263::Aldose_epim 99.11::10-103 GO:0005829::cytosol confident hh_1snz_A_1::10-93,95-106 very confident psy11903 179 Q792Q4::Cysteine-rich PDZ-binding protein ::Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.::Rattus norvegicus (taxid: 10116) confident COG2017::GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] 98.97::13-114 PF10235::Cript 100.00::90-179 GO:0043025::neuronal cell body confident hh_1snz_A_1::8-18,22-24,27-36,38-97,99-99,101-114 very confident psy7055 102 Q3T132::Ragulator complex protein LAMTOR2 ::Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, recruits the Rag GTPases and the mTORC1 complex to lysosomes, a key step in activation of the TOR signaling cascade by amino acids. Adapter protein that enhances the efficiency of the MAP kinase cascade facilitating the activation of MAPK2.::Bos taurus (taxid: 9913) confident COG2018::Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only] 99.44::2-94 PF03259::Robl_LC7 99.13::1-71 GO:0032947::protein complex scaffold confident hh_1vet_B_1::1-101 very confident psy6241 211 Q3T132::Ragulator complex protein LAMTOR2 ::Regulator of the TOR pathway, a signaling cascade that promotes cell growth in response to growth factors, energy levels, and amino acids. As part of the Ragulator complex, recruits the Rag GTPases and the mTORC1 complex to lysosomes, a key step in activation of the TOR signaling cascade by amino acids. Adapter protein that enhances the efficiency of the MAP kinase cascade facilitating the activation of MAPK2.::Bos taurus (taxid: 9913) confident COG2018::Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only] 99.57::101-203 PF03259::Robl_LC7 99.17::101-180 GO:0032947::protein complex scaffold confident bp_1vet_B_1::101-207 very confident psy15579 368 Q9HZP7::Electron transfer flavoprotein subunit alpha ::The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).::Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) confident COG2025::FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] 100.00::6-259 PF00766::ETF_alpha 100.00::110-222 GO:0005739::mitochondrion confident hh_1efv_A_1::5-90,93-134,159-210,215-259 very confident psy15576 108 P13804::Electron transfer flavoprotein subunit alpha, mitochondrial ::The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).::Homo sapiens (taxid: 9606) very confident COG2025::FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] 100.00::4-108 PF00766::ETF_alpha 99.87::6-72 GO:0050660::flavin adenine dinucleotide binding very confident bp_1efv_A_1::50-108 very confident psy9406 312 Q9HZP7::Electron transfer flavoprotein subunit alpha ::The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).::Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) (taxid: 208964) very confident COG2025::FixB Electron transfer flavoprotein, alpha subunit [Energy production and conversion] 100.00::1-312 PF00766::ETF_alpha 100.00::190-275 GO:0050660::flavin adenine dinucleotide binding very confident hh_1efv_A_1::1-170,173-312 very confident psy11115 203 P51660::Peroxisomal multifunctional enzyme type 2 ::Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Catalyzes the formation of 3-ketoacyl-CoA intermediates from both straight-chain and 2-methyl-branched-chain fatty acids.::Mus musculus (taxid: 10090) portable COG2030::MaoC Acyl dehydratase [Lipid metabolism] 99.77::10-126 PF01575::MaoC_dehydratas 99.81::14-104 GO:0043231::intracellular membrane-bounded organelle confident hh_1s9c_A_1::8-39,47-55,57-131 very confident psy11114 88 P51659::Peroxisomal multifunctional enzyme type 2 ::Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Catalyzes the formation of 3-ketoacyl-CoA intermediates from both straight-chain and 2-methyl-branched-chain fatty acids.::Homo sapiens (taxid: 9606) confident COG2030::MaoC Acyl dehydratase [Lipid metabolism] 97.86::16-75 PF13452::MaoC_dehydrat_N 99.72::8-70 GO:0036112::medium-chain fatty-acyl-CoA metabolic process confident hh_1s9c_A_1::6-61,63-79 very confident psy9438 274 P33431::Superoxide dismutase [Cu-Zn] ::Destroys radicals which are normally produced within the cells and which are toxic to biological systems.::Cavia porcellus (taxid: 10141) confident COG2032::SodC Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism] 100.00::131-272 PF00080::Sod_Cu 100.00::130-271 GO:0005615::extracellular space confident hh_1xso_A_1::131-158,164-211,213-274 very confident psy962 155 P33431::Superoxide dismutase [Cu-Zn] ::Destroys radicals which are normally produced within the cells and which are toxic to biological systems.::Cavia porcellus (taxid: 10141) very confident COG2032::SodC Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism] 100.00::14-151 PF00080::Sod_Cu 100.00::6-150 GO:0043234::protein complex very confident hh_1xso_A_1::5-26,28-90,92-154 very confident psy9876 193 P33431::Superoxide dismutase [Cu-Zn] ::Destroys radicals which are normally produced within the cells and which are toxic to biological systems.::Cavia porcellus (taxid: 10141) confident COG2032::SodC Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism] 99.89::11-95 PF00080::Sod_Cu 99.87::2-94 GO:0043234::protein complex confident hh_3kbe_A_1::2-98 very confident psy967 82 Q95086::Superoxide dismutase [Cu-Zn] ::Destroys radicals which are normally produced within the cells and which are toxic to biological systems.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG2032::SodC Cu/Zn superoxide dismutase [Inorganic ion transport and metabolism] 97.03::5-50 PF00080::Sod_Cu 98.66::6-52 GO:0043234::protein complex confident hh_2wyt_A_1::3-51 very confident psy10959 132 P84244::Histone H3.3 ::Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.93::42-131 PF00125::Histone 99.85::54-128 GO:0005576::extracellular region very confident hh_2hue_B_1::56-132 very confident psy17766 148 Q16778::Histone H2B type 2-E ::Has broad antibacterial activity. May contribute to the formation of the functional antimicrobial barrier of the colonic epithelium, and to the bactericidal activity of amniotic fluid.::Homo sapiens (taxid: 9606) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 97.35::75-127 PF00125::Histone 99.15::75-123 GO:0005576::extracellular region very confident hh_2nqb_D_1::62-148 very confident psy7427 151 P68431::Histone H3.1 ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Homo sapiens (taxid: 9606) confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.79::42-136 PF00125::Histone 99.60::58-136 GO:0031298::replication fork protection complex confident hh_1tzy_C_1::35-113,126-136 very confident psy17763 136 P68431::Histone H3.1 ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Homo sapiens (taxid: 9606) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.93::44-135 PF00125::Histone 99.85::58-132 GO:0031618::nuclear centromeric heterochromatin very confident hh_2hue_B_1::60-136 very confident psy16895 93 P84244::Histone H3.3 ::Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.96::1-92 PF00125::Histone 99.87::15-89 GO:0031618::nuclear centromeric heterochromatin very confident hh_2hue_B_1::17-93 very confident psy2783 340 P84244::Histone H3.3 ::Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.85::149-238 PF00125::Histone 99.72::163-237 GO:0031618::nuclear centromeric heterochromatin very confident hh_1tzy_C_1::108-239 very confident psy16276 215 P84244::Histone H3.3 ::Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.58::44-138 PF00125::Histone 98.96::58-128 GO:0031618::nuclear centromeric heterochromatin very confident hh_3r45_A_1::21-46,49-98,102-103,105-105,122-138,140-144 very confident psy15118 132 Q71DI3::Histone H3.2 ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Homo sapiens (taxid: 9606) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.85::44-126 PF00125::Histone 99.67::59-125 GO:0031618::nuclear centromeric heterochromatin very confident hh_1tzy_C_1::1-124 very confident psy13072 257 P02283::Histone H2B ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Drosophila melanogaster (taxid: 7227) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 97.90::173-236 PF00125::Histone 99.50::165-232 GO:0040035::hermaphrodite genitalia development very confident hh_2nqb_D_1::156-257 very confident psy1398 102 P68431::Histone H3.1 ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Homo sapiens (taxid: 9606) very confident COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.95::3-92 PF00125::Histone 99.86::15-89 GO:0060968::regulation of gene silencing very confident hh_2hue_B_1::17-91 very confident psy17761 92 P62796::Histone H4 ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Oreochromis niloticus (taxid: 8128) portable COG2036::HHT1 Histones H3 and H4 [Chromatin structure and dynamics] 99.76::21-87 PF15511::CENP-T 99.44::9-74 GO:0006334::nucleosome assembly confident hh_1id3_B_1::20-70,72-84 very confident psy4808 156 Q5HCK7::Pyrrolidone-carboxylate peptidase ::Removes 5-oxoproline from various penultimate amino acid residues except L-proline.::Staphylococcus aureus (strain COL) (taxid: 93062) portable COG2039::Pcp Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) [Posttranslational modification, protein turnover, chaperones] 100.00::25-156 PF01470::Peptidase_C15 100.00::25-156 GO:0005829::cytosol confident hh_1iu8_A_1::25-53,55-55,59-136,139-151,153-156 very confident psy17603 591 O31463::Homocysteine S-methyltransferase YbgG ::::Bacillus subtilis (strain 168) (taxid: 224308) portable COG2040::MHT1 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) [Amino acid transport and metabolism] 100.00::1-408 PF02574::S-methyl_trans 100.00::4-406 GO:0008152::metabolic process confident hh_1q7z_A_1::3-18,20-24,26-29,34-71,73-74,76-96,158-158,160-174,182-182,184-263,267-292,342-358,360-416,423-436,447-461,465-490,492-527,532-536,540-570 very confident psy15811 581 O31463::Homocysteine S-methyltransferase YbgG ::::Bacillus subtilis (strain 168) (taxid: 224308) portable COG2040::MHT1 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) [Amino acid transport and metabolism] 100.00::265-575 PF02574::S-methyl_trans 100.00::265-574 GO:0008152::metabolic process confident hh_1q7z_A_2::5-21,23-26,29-30,34-76,78-98,117-117,119-133,142-221,225-251,253-279,281-288,295-307 very confident psy4652 291 C3MQM6::Probable ribosome biogenesis protein LS215_1685 ::Probable pre-rRNA processing protein involved in ribosome biogenesis.::Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) (taxid: 429572) portable COG2042::Uncharacterized conserved protein [Function unknown] 100.00::1-250 PF04034::DUF367 100.00::77-248 GO:0005829::cytosol confident no hit no match psy7396 145 Q9CQR4::Acyl-coenzyme A thioesterase 13 ::Acyl-CoA thioesterases are a group of enzymes that catalyze the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Has acyl-CoA thioesterase activity towards medium (C12) and long-chain (C18) fatty acyl-CoA substrates. Can also hydrolyze 3-hydroxyphenylacetyl-CoA (in vitro).::Mus musculus (taxid: 10090) confident COG2050::PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism] 99.93::15-144 PF14539::DUF4442 99.78::13-141 GO:0047617::acyl-CoA hydrolase activity confident hh_3f5o_A_1::14-72,81-144 very confident psy2574 115 Q71UM5::40S ribosomal protein S27-like ::::Homo sapiens (taxid: 9606) very confident COG2051::RPS27A Ribosomal protein S27E [Translation, ribosomal structure and biogenesis] 99.96::22-77 PF01667::Ribosomal_S27e 100.00::28-79 GO:0022627::cytosolic small ribosomal subunit very confident hh_3iz6_X_1::1-80 very confident psy5287 65 Q6PBK3::40S ribosomal protein S28 ::::Danio rerio (taxid: 7955) very confident COG2053::RPS28A Ribosomal protein S28E/S33 [Translation, ribosomal structure and biogenesis] 100.00::5-65 PF01200::Ribosomal_S28e 100.00::1-65 GO:0022627::cytosolic small ribosomal subunit very confident hh_2xzm_1_1::1-65 very confident psy5915 89 B2GV06::Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial ::Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.::Rattus norvegicus (taxid: 10116) confident COG2057::AtoA Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism] 99.85::20-86 PF01144::CoA_trans 94.20::23-70 GO:0042803::protein homodimerization activity confident hh_3k6m_A_1::19-89 very confident psy12544 140 B2GV06::Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial ::Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.::Rattus norvegicus (taxid: 10116) confident COG2057::AtoA Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism] 100.00::2-92 PF13336::AcetylCoA_hyd_C 97.59::8-79 GO:0042803::protein homodimerization activity confident hh_3rrl_B_1::1-34,36-81,83-92 very confident psy2830 183 P42899::60S acidic ribosomal protein P2 ::Plays an important role in the elongation step of protein synthesis.::Bos taurus (taxid: 9913) confident COG2058::RPP1A Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis] 99.95::39-152 PF00428::Ribosomal_60s 99.85::55-151 GO:0005634::nucleus confident no hit no match psy10269 108 P91913::60S acidic ribosomal protein P1 ::Plays an important role in the elongation step of protein synthesis.::Caenorhabditis elegans (taxid: 6239) very confident COG2058::RPP1A Ribosomal protein L12E/L44/L45/RPP1/RPP2 [Translation, ribosomal structure and biogenesis] 99.90::2-108 PF00428::Ribosomal_60s 99.84::17-107 GO:0022625::cytosolic large ribosomal subunit confident no hit no match psy8041 101 Q571F8::Glutaminase liver isoform, mitochondrial ::Plays an important role in the regulation of glutamine catabolism. Promotes mitochondrial respiration and increases ATP generation in cells by catalyzing the synthesis of glutamate and alpha-ketoglutarate. Increases cellular anti-oxidant function via NADH and glutathione production.::Mus musculus (taxid: 10090) confident COG2066::GlsA Glutaminase [Amino acid transport and metabolism] 100.00::1-97 PF04960::Glutaminase 100.00::1-97 GO:0005759::mitochondrial matrix confident hh_3voy_A_1::1-97 very confident psy5714 163 Q571F8::Glutaminase liver isoform, mitochondrial ::Plays an important role in the regulation of glutamine catabolism. Promotes mitochondrial respiration and increases ATP generation in cells by catalyzing the synthesis of glutamate and alpha-ketoglutarate. Increases cellular anti-oxidant function via NADH and glutathione production.::Mus musculus (taxid: 10090) confident COG2066::GlsA Glutaminase [Amino acid transport and metabolism] 99.96::1-73 PF04960::Glutaminase 99.96::1-73 GO:0005759::mitochondrial matrix confident hh_3uo9_A_1::1-9,12-94 very confident psy8039 105 Q8FMX4::Glutaminase ::::Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) (taxid: 196164) confident COG2066::GlsA Glutaminase [Amino acid transport and metabolism] 100.00::4-104 PF04960::Glutaminase 100.00::21-103 GO:0005759::mitochondrial matrix confident hh_1mki_A_1::6-103 very confident psy14047 350 Q92820::Gamma-glutamyl hydrolase ::Hydrolyzes the polyglutamate sidechains of pteroylpolyglutamates. Progressively removes gamma-glutamyl residues from pteroylpoly-gamma-glutamate to yield pteroyl-alpha-glutamate (folic acid) and free glutamate. May play an important role in the bioavailability of dietary pteroylpolyglutamates and in the metabolism of pteroylpolyglutamates and antifolates.::Homo sapiens (taxid: 9606) confident COG2071::Predicted glutamine amidotransferases [General function prediction only] 100.00::4-312 PF07722::Peptidase_C26 100.00::7-276 GO:0005773::vacuole confident hh_1l9x_A_1::3-18,22-80,98-101,136-137,141-178,180-249,251-338,341-350 very confident psy12875 308 Q92820::Gamma-glutamyl hydrolase ::Hydrolyzes the polyglutamate sidechains of pteroylpolyglutamates. Progressively removes gamma-glutamyl residues from pteroylpoly-gamma-glutamate to yield pteroyl-alpha-glutamate (folic acid) and free glutamate. May play an important role in the bioavailability of dietary pteroylpolyglutamates and in the metabolism of pteroylpolyglutamates and antifolates.::Homo sapiens (taxid: 9606) portable COG2071::Predicted glutamine amidotransferases [General function prediction only] 100.00::16-299 PF07722::Peptidase_C26 100.00::19-293 GO:0005773::vacuole confident hh_1l9x_A_1::16-31,36-94,96-133,135-146,153-155,174-175,194-195,209-210,213-307 very confident psy12350 1129 Q9HFE4::Thiol-specific monooxygenase ::Flavin-dependent oxidation of thiol-containing compounds. Probably required for the correct folding of disulfide-bonded proteins.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2072::TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] 99.94::7-293 PF00743::FMO-like 100.00::741-1126 GO:0003824::catalytic activity confident hh_2xve_A_1::741-762,765-907,931-1051,1053-1053,1055-1065,1070-1084,1086-1126 very confident psy2343 396 Q99518::Dimethylaniline monooxygenase [N-oxide-forming] 2 ::Catalyzes the N-oxidation of certain primary alkylamines to their oximes via an N-hydroxylamine intermediate. Inactive toward certain tertiary amines, such as imipramine or chloropromazine. Can catalyze the S-oxidation of methimazole. The truncated form is catalytically inactive.::Homo sapiens (taxid: 9606) confident COG2072::TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] 100.00::1-347 PF00743::FMO-like 100.00::1-395 GO:0005789::endoplasmic reticulum membrane confident hh_2gv8_A_1::1-64,67-171,241-321,323-348,353-367,372-394 very confident psy2398 433 Q99518::Dimethylaniline monooxygenase [N-oxide-forming] 2 ::Catalyzes the N-oxidation of certain primary alkylamines to their oximes via an N-hydroxylamine intermediate. Inactive toward certain tertiary amines, such as imipramine or chloropromazine. Can catalyze the S-oxidation of methimazole. The truncated form is catalytically inactive.::Homo sapiens (taxid: 9606) confident COG2072::TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism] 100.00::5-384 PF00743::FMO-like 100.00::8-432 GO:0005789::endoplasmic reticulum membrane confident hh_4a9w_A_1::7-49,56-101,104-128,130-196,198-220,228-232,238-241,246-247,253-256,258-382 very confident psy4232 130 O74884::60S ribosomal protein L24-B ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) very confident COG2075::RPL24A Ribosomal protein L24E [Translation, ribosomal structure and biogenesis] 100.00::1-65 PF01246::Ribosomal_L24e 100.00::1-71 GO:0003723::RNA binding confident hh_2zkr_u_1::1-126 very confident psy4931 186 Q5RF04::Probable ribosome biogenesis protein RLP24 ::Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of GTPBP4/NOG1 to pre-60S particles.::Pongo abelii (taxid: 9601) very confident COG2075::RPL24A Ribosomal protein L24E [Translation, ribosomal structure and biogenesis] 100.00::1-65 PF01246::Ribosomal_L24e 100.00::1-67 GO:0022625::cytosolic large ribosomal subunit very confident hh_4a17_T_1::1-68,72-90,97-107 very confident psy4929 633 Q9VGN9::Probable ribosome biogenesis protein RLP24 ::Involved in the biogenesis of the 60S ribosomal subunit. Ensures the docking of NOG1 to pre-60S particles.::Drosophila melanogaster (taxid: 7227) confident COG2075::RPL24A Ribosomal protein L24E [Translation, ribosomal structure and biogenesis] 97.32::169-221 PF07707::BACK 99.76::409-519 GO:0022625::cytosolic large ribosomal subunit confident hh_3no8_A_1::79-186 very confident psy1882 233 Q9VCF0::Uncharacterized protein CG5902 ::::Drosophila melanogaster (taxid: 7227) confident COG2078::AMMECR1 Uncharacterized conserved protein [Function unknown] 100.00::41-221 PF01871::AMMECR1 100.00::44-219 GO:0005829::cytosol confident hh_1wsc_A_1::40-65,67-158,163-198,202-221 very confident psy7831 206 P19921::Carbon monoxide dehydrogenase small chain ::Catalyzes the oxidation of carbon monoxide to carbon dioxide.::Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) (taxid: 504832) confident COG2080::CoxS Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion] 100.00::13-193 PF01799::Fer2_2 100.00::97-189 GO:0055114::oxidation-reduction process confident hh_1rm6_C_1::12-26,29-68,79-104,106-127,144-158,160-193 very confident psy755 183 P63935::Probable 3-hydroxyisobutyrate dehydrogenase ::::Mycobacterium tuberculosis (taxid: 1773) confident COG2084::MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] 100.00::1-183 PF03446::NAD_binding_2 99.97::1-152 GO:0005829::cytosol confident hh_3doj_A_1::1-183 very confident psy764 286 P63935::Probable 3-hydroxyisobutyrate dehydrogenase ::::Mycobacterium tuberculosis (taxid: 1773) confident COG2084::MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] 100.00::1-283 PF03446::NAD_binding_2 100.00::2-153 GO:0042838::D-glucarate catabolic process confident hh_2gf2_A_1::1-285 very confident psy10640 242 Q5RFK0::Electron transfer flavoprotein subunit beta ::The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).::Pongo abelii (taxid: 9601) confident COG2086::FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion] 100.00::29-226 PF01012::ETF 99.55::31-202 GO:0005739::mitochondrion confident hh_1efv_B_1::29-57,59-91,138-223 very confident psy9408 219 Q7F9U3::Electron transfer flavoprotein subunit beta, mitochondrial ::The electron transfer flavoprotein serves as a specific electron acceptor for several dehydrogenases, including five acyl-CoA dehydrogenases, glutaryl-CoA and sarcosine dehydrogenase. It transfers the electrons to the main mitochondrial respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase).::Oryza sativa subsp. japonica (taxid: 39947) very confident COG2086::FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion] 100.00::1-219 PF01012::ETF 99.97::2-153 GO:0005829::cytosol confident hh_1efv_B_1::1-20,22-118,120-217 very confident psy17999 335 Q58465::Uncharacterized protein MJ1065 ::::Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) confident COG2089::SpsE Sialic acid synthase [Cell envelope biogenesis, outer membrane] 100.00::1-331 PF03102::NeuB 100.00::1-258 GO:0070085::glycosylation confident hh_1vli_A_1::1-22,25-116,118-134,158-297,299-330 very confident psy2429 108 P32471::Elongation factor 1-beta ::Catalytic subunit of the guanine nucleotide exchange factor (GEF) (eEF1B subcomplex) of the eukaryotic elongation factor 1 complex (eEF1). Stimulates the exchange of GDP for GTP on elongation factor 1A (eEF1A), probably by displacing GDP from the nucleotide binding pocket in eEF1A. The 30-fold higher concentration of GTP compared to GDP in cells favors the formation of eEF1A-GTP, which rapidly forms a ternary complex with aminoacyl-tRNA that in turn displaces eEF1B from the complex.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG2092::EFB1 Translation elongation factor EF-1beta [Translation, ribosomal structure and biogenesis] 99.97::22-107 PF00736::EF1_GNE 100.00::23-107 GO:0005829::cytosol confident hh_1b64_A_1::20-107 very confident psy11729 281 C1EZP2::Putative 3-methyladenine DNA glycosylase ::::Bacillus cereus (strain 03BB102) (taxid: 572264) confident COG2094::Mpg 3-methyladenine DNA glycosylase [DNA replication, recombination, and repair] 100.00::17-275 PF02245::Pur_DNA_glyco 100.00::19-266 GO:0008152::metabolic process confident hh_3uby_A_1::14-131,138-142,186-211,213-249,251-279 very confident psy873 141 Q9V597::60S ribosomal protein L31 ::::Drosophila melanogaster (taxid: 7227) confident COG2097::RPL31A Ribosomal protein L31E [Translation, ribosomal structure and biogenesis] 99.91::26-116 PF01198::Ribosomal_L31e 99.96::25-115 GO:0000022::mitotic spindle elongation confident hh_2zkr_x_1::22-44,46-64,67-79,88-139 very confident psy2814 176 Q42808::TATA-box-binding protein ::General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II.::Glycine max (taxid: 3847) very confident COG2101::SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription] 100.00::1-174 PF00352::TBP 99.98::88-174 GO:0000126::transcription factor TFIIIB complex very confident hh_1ytb_A_1::1-176 very confident psy16701 272 P17871::TATA-box-binding protein ::General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG2101::SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription] 100.00::32-208 PF00352::TBP 99.97::122-207 GO:0005669::transcription factor TFIID complex confident hh_1rm1_A_1::82-106,111-272 very confident psy17242 172 A6H907::TATA box-binding protein-like protein 2 ::Transcription factor required in complex with TAF3 for the differentiation of myoblasts into myocytes. The complex replaces TFIID at specific promoters at an early stage in the differentiation process.::Pan troglodytes (taxid: 9598) very confident COG2101::SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription] 100.00::16-171 PF00352::TBP 99.98::19-102 GO:0005737::cytoplasm very confident hh_1ytb_A_1::17-171 very confident psy9199 204 Q32LB1::TATA box-binding protein-like protein 1 ::Does not bind the TATA box. Has DNA-binding ability.::Bos taurus (taxid: 9913) confident COG2101::SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription] 100.00::40-201 PF00352::TBP 99.95::42-125 GO:0009790::embryo development confident hh_1ytb_A_1::41-202 very confident psy3800 133 Q8TQD0::Macro domain-containing protein MA_1614 ::::Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (taxid: 188937) confident COG2110::Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [General function prediction only] 99.94::2-102 PF01661::Macro 99.94::1-103 GO:0019213::deacetylase activity confident hh_2x47_A_1::1-44,51-102 very confident psy1841 156 P16066::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Homo sapiens (taxid: 9606) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.76::35-155 PF00211::Guanylate_cyc 99.91::35-156 GO:0004383::guanylate cyclase activity confident hh_3et6_A_1::35-156 very confident psy5058 377 P16066::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Homo sapiens (taxid: 9606) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.98::179-377 PF00211::Guanylate_cyc 100.00::205-377 GO:0004383::guanylate cyclase activity confident hh_3uvj_A_1::200-275,277-298,301-377 very confident psy10450 111 P18293::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Mus musculus (taxid: 10090) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.72::9-111 PF00211::Guanylate_cyc 99.86::9-110 GO:0004383::guanylate cyclase activity confident hh_3uvj_A_1::9-25,30-53,55-102,104-110 very confident psy13820 487 P51841::Retinal guanylyl cyclase 2 ::Probably plays a specific functional role in the rods and/or cones of photoreceptors. It may be the enzyme involved in the resynthesis of cGMP required for recovery of the dark state after phototransduction.::Homo sapiens (taxid: 9606) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.98::144-352 PF00211::Guanylate_cyc 100.00::169-351 GO:0004383::guanylate cyclase activity confident hh_3et6_A_1::167-260,263-352 very confident psy13822 123 P55203::Retinal guanylyl cyclase 1 ::Probably plays a specific functional role in the rods and/or cones of photoreceptors. It may be the enzyme involved in the resynthesis of cGMP required for recovery of the dark state after phototransduction.::Bos taurus (taxid: 9913) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.93::9-122 PF00211::Guanylate_cyc 99.96::4-122 GO:0004383::guanylate cyclase activity confident hh_3et6_A_1::2-97,100-123 very confident psy16053 351 P21932::Adenylate cyclase type 3 ::Mediates odorant detection (possibly) via modulation of intracellular cAMP concentration.::Rattus norvegicus (taxid: 10116) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 100.00::26-276 PF00211::Guanylate_cyc 100.00::57-273 GO:0006171::cAMP biosynthetic process confident hh_1ab8_A_1::52-108,125-152,155-278 very confident psy10907 72 Q80TL1::Adenylate cyclase type 2 ::This is a membrane-bound, calmodulin-insensitive adenylyl cyclase.::Mus musculus (taxid: 10090) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.15::4-70 PF00211::Guanylate_cyc 99.51::5-71 GO:0006171::cAMP biosynthetic process very confident hh_1azs_A_1::4-71 very confident psy2440 60 P40145::Adenylate cyclase type 8 ::This is a membrane-bound, calcium-stimulable adenylyl cyclase. May be involved in learning, in memory and in drug dependence.::Homo sapiens (taxid: 9606) portable COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.02::2-60 PF00211::Guanylate_cyc 99.41::2-60 GO:0006184::GTP catabolic process confident hh_2wz1_A_1::2-48,50-60 very confident psy9751 182 P32870::Ca(2+)/calmodulin-responsive adenylate cyclase ::This is a membrane-bound, calmodulin-sensitive adenylyl cyclase. Inactivation of this cyclase leads to a learning and memory defect.::Drosophila melanogaster (taxid: 7227) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.92::1-162 PF00211::Guanylate_cyc 99.97::1-160 GO:0008294::calcium- and calmodulin-responsive adenylate cyclase activity confident hh_1azs_A_1::1-51,74-166 very confident psy16759 512 P21932::Adenylate cyclase type 3 ::Mediates odorant detection (possibly) via modulation of intracellular cAMP concentration.::Rattus norvegicus (taxid: 10116) portable COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.96::197-509 PF00211::Guanylate_cyc 100.00::226-507 GO:0009190::cyclic nucleotide biosynthetic process confident hh_1ab8_A_1::220-308,340-351,356-363,379-382,401-410,426-510 very confident psy9752 722 P32870::Ca(2+)/calmodulin-responsive adenylate cyclase ::This is a membrane-bound, calmodulin-sensitive adenylyl cyclase. Inactivation of this cyclase leads to a learning and memory defect.::Drosophila melanogaster (taxid: 7227) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.94::263-527 PF00211::Guanylate_cyc 100.00::290-524 GO:0016020::membrane confident hh_1ab8_A_1::284-371,407-527 very confident psy9434 100 P40145::Adenylate cyclase type 8 ::This is a membrane-bound, calcium-stimulable adenylyl cyclase. May be involved in learning, in memory and in drug dependence.::Homo sapiens (taxid: 9606) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.48::4-99 PF00211::Guanylate_cyc 99.76::4-99 GO:0016021::integral to membrane confident rp_1ab8_A_1::17-93 very confident psy17569 197 P40145::Adenylate cyclase type 8 ::This is a membrane-bound, calcium-stimulable adenylyl cyclase. May be involved in learning, in memory and in drug dependence.::Homo sapiens (taxid: 9606) portable COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.67::99-195 PF00211::Guanylate_cyc 99.77::99-194 GO:0043231::intracellular membrane-bounded organelle confident hh_1azs_A_1::99-194 very confident psy10910 93 Q80TL1::Adenylate cyclase type 2 ::This is a membrane-bound, calmodulin-insensitive adenylyl cyclase.::Mus musculus (taxid: 10090) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 98.52::50-93 PF00211::Guanylate_cyc 98.85::7-67 GO:0043234::protein complex confident hh_1azs_A_2::13-69 very confident psy7403 368 P16066::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Homo sapiens (taxid: 9606) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.89::18-261 PF00211::Guanylate_cyc 99.94::13-259 GO:0043679::axon terminus confident hh_3uvj_A_1::8-68,71-76,78-86,88-98,123-128,162-166,169-169,172-262 very confident psy13613 112 Q8INF0::Soluble guanylate cyclase 88E ::Heterodimers with Gyc-89Da and Gyc-89Db are activated in response to changing oxygen concentrations, alerting flies to hypoxic environments. Under normal oxygen concentrations, oxygen binds to the heme group and results in low levels of guanylyl cyclase activity. When exposed to reduced oxygen concentrations, the oxygen dissociates from the heme group resulting in activation of the enzyme.::Drosophila melanogaster (taxid: 7227) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.26::4-65 PF00211::Guanylate_cyc 99.52::1-63 GO:0043679::axon terminus confident hh_1ab8_A_1::1-66 very confident psy7235 305 Q9ERL9::Guanylate cyclase soluble subunit alpha-3 ::::Mus musculus (taxid: 10090) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 100.00::39-283 PF00211::Guanylate_cyc 100.00::62-280 GO:0043679::axon terminus confident hh_3uvj_A_1::57-159,192-288 very confident psy16155 306 P0A4Y1::Adenylate cyclase ::::Mycobacterium bovis (taxid: 1765) portable COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.91::28-242 PF00211::Guanylate_cyc 99.95::59-240 GO:0044425::membrane part confident hh_1ab8_A_1::55-133,150-242 very confident psy14005 226 P18293::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Mus musculus (taxid: 10090) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.97::46-226 PF00211::Guanylate_cyc 100.00::41-226 GO:0050896::response to stimulus confident hh_3uvj_A_1::37-111,144-166,169-226 very confident psy6828 392 P20594::Atrial natriuretic peptide receptor 2 ::Receptor for the C-type natriuretic peptide NPPC/CNP hormone. Has guanylate cyclase activity upon binding of its ligand. May play a role in the regulation of skeletal growth.::Homo sapiens (taxid: 9606) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.95::220-391 PF00211::Guanylate_cyc 99.96::215-391 GO:0050896::response to stimulus confident hh_3uvj_A_1::211-283,316-340,343-391 very confident psy17571 151 P97490::Adenylate cyclase type 8 ::This is a membrane-bound, calcium-stimulable adenylyl cyclase. May be involved in learning, in memory and in drug dependence.::Mus musculus (taxid: 10090) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.64::1-86 PF00211::Guanylate_cyc 99.80::1-84 GO:0072372::primary cilium confident hh_1azs_A_1::1-87 very confident psy1896 101 P26261::Syndecan-3 ::Cell surface proteoglycan that may bear both heparan sulfate and chondroitin sulfate. The multiple functional domains provide potential sites for mediating the adhesive cell-matrix interactions and cytoskeletal reorganization involved in limb chondrogenesis. Interaction with other matrix ligands as well as phosphorylation and shedding of the ectodomain might be involved in cell shape changes that occur during chondrogenesis. Furthermore, shedding of the ectodomain might break the adhesive interactions that promoted condensation, thus facilitating the deposition of cartilage matrix molecules.::Gallus gallus (taxid: 9031) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 98.09::4-71 PF01034::Syndecan 99.72::45-99 GO:0045202::synapse very confident hh_3et6_A_1::4-51,57-71 very confident psy7227 635 P20595::Guanylate cyclase soluble subunit beta-1 ::::Rattus norvegicus (taxid: 10116) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 99.53::513-634 PF07700::HNOB 100.00::5-194 GO:0008074::guanylate cyclase complex, soluble confident hh_3tfg_A_1::5-30,35-35,41-41,52-121,124-179,181-208 very confident psy7228 151 P20595::Guanylate cyclase soluble subunit beta-1 ::::Rattus norvegicus (taxid: 10116) portable COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 97.50::84-147 PF07700::HNOB 99.90::2-80 GO:0008074::guanylate cyclase complex, soluble confident hh_3tfg_A_1::2-6,9-79 very confident psy6744 149 P32870::Ca(2+)/calmodulin-responsive adenylate cyclase ::This is a membrane-bound, calmodulin-sensitive adenylyl cyclase. Inactivation of this cyclase leads to a learning and memory defect.::Drosophila melanogaster (taxid: 7227) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 92.96::67-147 PF07701::HNOBA 98.04::47-91 GO:0007528::neuromuscular junction development confident hh_1azs_A_1::86-148 confident psy7229 183 P20595::Guanylate cyclase soluble subunit beta-1 ::::Rattus norvegicus (taxid: 10116) confident COG2114::CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] 97.94::29-88 PF07701::HNOBA 99.95::50-183 GO:0043231::intracellular membrane-bounded organelle confident hh_2wz1_A_1::26-105 very confident psy7340 440 Q2HJH9::Programmed cell death protein 5 ::May function in the process of apoptosis.::Bos taurus (taxid: 9913) confident COG2118::DNA-binding protein [General function prediction only] 99.92::20-100 PF01984::dsDNA_bind 99.93::11-100 GO:0005634::nucleus confident no hit no match psy8300 256 no hit no match COG2119::Predicted membrane protein [Function unknown] 100.00::31-256 PF01169::UPF0016 99.86::34-134 GO:0005783::endoplasmic reticulum confident no hit no match psy16988 103 B9G125::GDT1-like protein 5 ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG2119::Predicted membrane protein [Function unknown] 99.81::37-100 PF01169::UPF0016 99.86::39-100 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy9088 756 Q6ICG6::Uncharacterized protein KIAA0930 ::::Homo sapiens (taxid: 9606) confident COG2123::RNase PH-related exoribonuclease [Translation, ribosomal structure and biogenesis] 100.00::412-675 PF09741::DUF2045 100.00::69-304 GO:0005634::nucleus confident hh_2je6_A_1::389-409,413-447,450-579,582-602,605-651 very confident psy16032 243 O54750::Cytochrome P450 2J6 ::::Mus musculus (taxid: 10090) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.79::106-241 PF00067::p450 99.88::111-242 GO:0004497::monooxygenase activity confident hh_3pm0_A_1::111-242 very confident psy14413 711 Q9CX98::Cytochrome P450 2U1 ::Catalyzes the hydroxylation of arachidonic acid, docosahexaenoic acid and other long chain fatty acids. May modulate the arachidonic acid signaling pathway and play a role in other fatty acid signaling processes.::Mus musculus (taxid: 10090) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::277-560 PF00067::p450 100.00::277-583 GO:0004497::monooxygenase activity confident hh_1cpt_A_1::363-374,376-427,443-459,461-510,521-559 very confident psy9446 174 Q9SZ46::Cytochrome P450 82C4 ::Can hydroxylates 8-methoxypsoralen to form 5-hydroxy-8-methoxypsoralen in vivo and in vitro. Involved in the early iron deficiency response, possibly through an IDE1-like mediated pathway.::Arabidopsis thaliana (taxid: 3702) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.90::19-163 PF00067::p450 99.96::20-167 GO:0004497::monooxygenase activity confident hh_2ij2_A_1::20-32,35-80,85-162 very confident psy6577 96 A2RRT9::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12).::Rattus norvegicus (taxid: 10116) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.12::4-88 PF00067::p450 99.15::5-89 GO:0005737::cytoplasm confident hh_2ve3_A_1::5-12,14-54,59-83 very confident psy16906 120 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 97.80::1-62 PF00067::p450 98.61::2-82 GO:0005737::cytoplasm confident hh_3mdm_A_1::2-82 very confident psy16355 228 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.48::32-227 PF00067::p450 99.91::15-227 GO:0005737::cytoplasm confident hh_2ve3_A_1::16-28,30-32,34-75,77-135,139-162,164-169,173-186,190-194,199-200,203-226 confident psy11242 69 O18993::Cytochrome P450 3A21 ::Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.::Callithrix jacchus (taxid: 9483) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 98.81::1-34 PF00067::p450 99.30::1-35 GO:0005811::lipid particle confident hh_3i3k_A_1::1-35 very confident psy10387 199 P04798::Cytochrome P450 1A1 ::Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.::Homo sapiens (taxid: 9606) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::2-172 PF00067::p450 100.00::2-195 GO:0009804::coumarin metabolic process confident hh_2ve3_A_1::2-72,74-174,176-179,181-198 very confident psy10395 79 P04798::Cytochrome P450 1A1 ::Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.::Homo sapiens (taxid: 9606) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.47::2-78 PF00067::p450 99.88::2-79 GO:0009804::coumarin metabolic process confident hh_2hi4_A_1::2-79 very confident psy16029 159 Q95078::Cytochrome P450 18a1 ::Probably involved in steroid hormones biosynthesis.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.89::2-158 PF00067::p450 99.94::2-158 GO:0009804::coumarin metabolic process confident hh_3pm0_A_1::3-49,54-158 very confident psy15775 191 A2RRT9::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12).::Rattus norvegicus (taxid: 10116) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.88::64-187 PF00067::p450 99.95::64-184 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::64-126,137-163,165-188 very confident psy9538 117 P29980::Probable cytochrome P450 110 ::Probably involved in alkane/fatty acid hydroxylase.::Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.92::1-116 PF00067::p450 99.97::1-113 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-88,93-117 very confident psy14275 303 P51538::Cytochrome P450 3A9 ::This isozyme seems to be implicated in olfaction. Active in the demethylation of erythromycin as well as benzphetamine.::Rattus norvegicus (taxid: 10116) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::92-303 PF00067::p450 100.00::94-303 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::94-112,116-132,139-193,196-238,241-303 very confident psy5847 170 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.97::26-170 PF00067::p450 100.00::1-167 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-11,15-142,145-145,148-170 very confident psy16716 141 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.90::26-138 PF00067::p450 100.00::1-140 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-11,15-110,116-119,129-140 very confident psy2604 189 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-185 PF00067::p450 100.00::1-182 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-27,29-29,32-160,162-176,178-186 very confident psy1886 170 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.97::26-169 PF00067::p450 100.00::1-167 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-11,15-142,145-145,148-170 very confident psy5859 93 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.87::1-81 PF00067::p450 99.95::1-81 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-81 very confident psy16719 197 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1-196 PF00067::p450 100.00::1-194 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-39,42-42,44-170,175-197 very confident psy9539 222 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.97::17-214 PF00067::p450 100.00::19-211 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::19-55,59-188,193-215 very confident psy6726 184 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.86::31-134 PF00067::p450 99.96::1-130 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::1-16,20-131 very confident psy2560 215 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::27-206 PF00067::p450 100.00::27-208 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::27-33,35-80,82-206 very confident psy16715 225 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::6-189 PF00067::p450 100.00::6-190 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::5-59,63-190,195-211,213-218 very confident psy14277 217 Q64459::Cytochrome P450 3A11 ::Catalyzes erythromycin N-demethylation, nifedipine oxidation and testosterone 6 beta-hydroxylation.::Mus musculus (taxid: 10090) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::33-217 PF00067::p450 100.00::34-217 GO:0018685::alkane 1-monooxygenase activity confident hh_2ve3_A_1::35-104,107-149,152-217 very confident psy7704 124 Q9VLZ7::Probable cytochrome P450 4d21 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 98.81::2-81 PF00067::p450 99.67::1-81 GO:0018685::alkane 1-monooxygenase activity confident hh_3dbg_A_1::1-21,25-81 very confident psy10368 549 P51538::Cytochrome P450 3A9 ::This isozyme seems to be implicated in olfaction. Active in the demethylation of erythromycin as well as benzphetamine.::Rattus norvegicus (taxid: 10116) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::86-546 PF00067::p450 100.00::60-543 GO:0031000::response to caffeine confident hh_2ve3_A_1::56-67,71-128,131-187,193-194,196-217,219-223,226-226,228-242,249-260,264-304,312-366,370-388,409-432,435-525,529-547 very confident psy16905 68 O46051::Probable cytochrome P450 4d14 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.89::2-68 PF00067::p450 99.95::1-68 GO:0031090::organelle membrane confident hh_2ve3_A_1::1-68 very confident psy14268 108 P08684::Cytochrome P450 3A4 ::Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It performs a variety of oxidation reactions (e.g. caffeine 8-oxidation, omeprazole sulphoxidation, midazolam 1'-hydroxylation and midazolam 4-hydroxylation) of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. The enzyme also hydroxylates etoposide.::Homo sapiens (taxid: 9606) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 98.98::1-27 PF00067::p450 99.40::1-29 GO:0042221::response to chemical stimulus confident hh_2ve3_A_1::1-28 confident psy6575 351 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::71-350 PF00067::p450 100.00::71-346 GO:0042221::response to chemical stimulus confident hh_2ve3_A_1::71-130,170-180,187-269,275-322,324-324,330-350 very confident psy5849 59 Q64459::Cytochrome P450 3A11 ::Catalyzes erythromycin N-demethylation, nifedipine oxidation and testosterone 6 beta-hydroxylation.::Mus musculus (taxid: 10090) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 98.44::2-58 PF00067::p450 99.69::1-58 GO:0042221::response to chemical stimulus confident hh_3i3k_A_1::2-22,24-58 very confident psy14266 560 Q64481::Cytochrome P450 3A16 ::Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics.::Mus musculus (taxid: 10090) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::44-560 PF00067::p450 100.00::18-560 GO:0042221::response to chemical stimulus confident hh_2ve3_A_1::10-34,36-55,58-88,92-145,151-175,177-181,184-184,186-200,207-216,222-265,434-487,490-531,534-560 very confident psy14858 405 Q9VRM7::Cytochrome P450 307a1 ::Required for correct development of the embryonic midline glial cells which are necessary for the formation of distinct segmental commissures.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::5-403 PF00067::p450 100.00::1-400 GO:0042359::vitamin D metabolic process confident hh_2hi4_A_1::1-83,85-168,170-181,183-401,403-404 very confident psy18219 520 Q9NGX9::Cytochrome P450 302a1, mitochondrial ::Required for CNS development; negatively regulates glial cell division in the embryonic midline. Involved in the metabolism of insect hormones; responsible for ecdysteroid C22-hydroxylase activity. May be involved in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::47-459 PF00067::p450 100.00::19-459 GO:0042767::ecdysteroid 22-hydroxylase activity confident hh_3n9y_A_1::12-28,30-35,39-64,66-107,111-195,199-413,417-459 very confident psy2144 423 Q9VGH1::Cytochrome P450 315a1, mitochondrial ::Required for CNS development: midline glial cells. Involved in the metabolism of insect hormones: responsible for ecdysteroid C2-hydroxylase activity. May be involved in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::49-422 PF00067::p450 100.00::24-423 GO:0044710::single-organism metabolic process confident hh_2hi4_A_1::21-40,46-99,103-104,106-181,186-211,214-388,390-423 very confident psy17785 180 P51538::Cytochrome P450 3A9 ::This isozyme seems to be implicated in olfaction. Active in the demethylation of erythromycin as well as benzphetamine.::Rattus norvegicus (taxid: 10116) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.86::43-180 PF00067::p450 99.93::74-180 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::74-124,128-180 very confident psy11243 91 P98187::Cytochrome P450 4F8 ::Hydroxylates arachidonic acid (20:4n-6) to (18R)-hydroxyarachidonate. Shows little activity against prostaglandin (PG) D2, PGE1, PGE2, PGF2alpha, and leukotriene B4. Catalyzes omega-2 and omega-3-hydroxylation of PGH1 and PGH2. Catalyzes epoxidation of 4,7,10,13,16,19-(Z)-docosahexaenoic acid (22:6n-3) and 7,10,13,16,19-(Z)-docosapentaenoic acid (22:5n-3) and omega-3-hydroxylation of 4,7,10,13,16-(Z)-docosapentaenoic acid (22:5n-6). Catalyzes hydrxylation of PGI2 and carbaprostacyclin.::Homo sapiens (taxid: 9606) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.54::1-57 PF00067::p450 99.82::1-57 GO:0055114::oxidation-reduction process confident hh_2cib_A_1::1-57,63-89 very confident psy739 438 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::74-426 PF00067::p450 100.00::49-423 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::45-67,71-72,74-115,117-174,179-271,274-401,403-427 very confident psy16903 421 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.94::104-418 PF00067::p450 100.00::56-411 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::47-71,73-82,92-95,98-129,138-193,197-205,207-211,214-214,216-230,234-237,243-247,249-274,296-368,372-402,406-411 very confident psy4939 302 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::52-296 PF00067::p450 100.00::53-293 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::54-123,126-166,186-272,274-297 very confident psy9540 214 Q5RCN6::Cytochrome P450 4V2 ::Catalyzes the omega-hydroxylation of medium-chain saturated fatty acids such as laurate, myristate and palmitate in an NADPH-dependent pathway. The substrate specificity is higher for myristate > laurate > palmitate (C14>C16>C12). May have a role in fatty acid and steroid metabolism in the eye.::Pongo abelii (taxid: 9601) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::7-198 PF00067::p450 100.00::8-202 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::9-67,71-199 very confident psy14276 256 Q64464::Cytochrome P450 3A13 ::Can activate aflatoxin B1 to a genotoxic product.::Mus musculus (taxid: 10090) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 99.96::11-252 PF00067::p450 100.00::7-249 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::13-22,26-64,66-138,141-231,235-253 very confident psy1708 482 Q9V4U9::Probable cytochrome P450 6a13 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::269-481 PF00067::p450 100.00::289-481 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::271-305,311-364,367-408,411-481 very confident psy16721 234 Q9V557::Probable cytochrome P450 4p2 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::12-234 PF00067::p450 100.00::12-231 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::12-52,55-206,211-234 very confident psy4753 809 Q9VA27::Cytochrome P450 4c3 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::76-600 PF00067::p450 100.00::48-597 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::39-68,73-82,86-177,181-204,206-211,215-250,258-258,270-341,400-482,531-577,579-601 very confident psy15843 517 Q9VA27::Cytochrome P450 4c3 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::30-505 PF00067::p450 100.00::6-510 GO:0055114::oxidation-reduction process confident hh_2ve3_A_1::13-51,53-111,115-132,207-207,213-217,219-224,228-242,246-253,260-286,304-368,370-375,378-506 very confident psy1301 429 Q9VRM7::Cytochrome P450 307a1 ::Required for correct development of the embryonic midline glial cells which are necessary for the formation of distinct segmental commissures.::Drosophila melanogaster (taxid: 7227) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::49-401 PF00067::p450 100.00::28-422 GO:0055114::oxidation-reduction process confident hh_3pm0_A_1::20-45,48-120,122-139,143-170,173-195,197-427 very confident psy15755 516 Q9VG17::Probable cytochrome P450 304a1 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::33-502 PF00067::p450 100.00::9-505 GO:0070887::cellular response to chemical stimulus confident hh_3pm0_A_1::4-13,15-26,31-44,46-86,89-90,92-148,153-181,183-185,187-199,233-233,241-242,245-311,313-505 very confident psy9975 382 Q64459::Cytochrome P450 3A11 ::Catalyzes erythromycin N-demethylation, nifedipine oxidation and testosterone 6 beta-hydroxylation.::Mus musculus (taxid: 10090) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::2-382 PF00067::p450 100.00::2-382 GO:0070989::oxidative demethylation confident hh_2ve3_A_1::2-41,43-85,88-99,102-102,104-126,128-131,134-135,137-152,159-169,173-213,220-274,277-319,322-382 very confident psy2446 500 Q9V4U9::Probable cytochrome P450 6a13 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::63-485 PF00067::p450 100.00::39-498 GO:0070989::oxidative demethylation very confident hh_2ve3_A_1::33-55,59-62,64-73,79-115,119-173,180-203,205-209,212-212,214-227,232-232,234-234,236-246,251-291,300-355,357-398,401-485 very confident psy2447 448 Q9V4U9::Probable cytochrome P450 6a13 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::48-448 PF00067::p450 100.00::28-448 GO:0070989::oxidative demethylation confident hh_2ve3_A_1::33-44,47-49,51-57,59-61,64-69,71-102,106-159,166-189,191-195,198-198,200-213,218-218,221-232,237-277,286-341,343-384,387-448 very confident psy14265 489 Q9V4U9::Probable cytochrome P450 6a13 ::May be involved in the metabolism of insect hormones and in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::2-325 PF00067::p450 100.00::1-327 GO:0070989::oxidative demethylation confident hh_2ve3_A_1::1-17,20-20,24-25,27-49,51-54,57-57,59-71,78-78,81-91,96-98,100-193,196-238,241-324 very confident psy14422 529 Q9VUF8::Ecdysone 20-monooxygenase ::Required for CNS development; midline glial cells. Involved in the metabolism of insect hormones; responsible for all ecdysone 20-monooxygenase activity during embryonic, larval and adult stages. May be involved in the breakdown of synthetic insecticides.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::90-529 PF00067::p450 100.00::62-526 GO:0070989::oxidative demethylation confident hh_3n9y_A_1::55-71,73-74,76-79,82-107,109-129,132-152,156-529 very confident psy13734 820 O54750::Cytochrome P450 2J6 ::::Mus musculus (taxid: 10090) portable COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::493-820 PF00067::p450 100.00::34-522 GO:1901564::organonitrogen compound metabolic process confident hh_2hi4_A_1::28-51,58-106,109-113,167-223,228-277,279-294,297-386,388-394,397-499,501-521 very confident psy4821 520 Q95078::Cytochrome P450 18a1 ::Probably involved in steroid hormones biosynthesis.::Drosophila melanogaster (taxid: 7227) confident COG2124::CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::276-497 PF00067::p450 100.00::40-518 GO:1901564::organonitrogen compound metabolic process confident hh_2ve3_A_1::30-60,62-157,159-165,169-180,258-258,262-266,269-273,276-302,305-320,327-331,336-398,400-498 very confident psy17953 234 P62753::40S ribosomal protein S6 ::May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA.::Homo sapiens (taxid: 9606) very confident COG2125::RPS6A Ribosomal protein S6E (S10) [Translation, ribosomal structure and biogenesis] 99.83::5-63 PF01092::Ribosomal_S6e 99.94::4-70 GO:0000003::reproduction confident hh_3u5c_G_1::4-106,112-117,121-182 very confident psy17954 143 Q9C0Z7::40S ribosomal protein S6-B ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG2125::RPS6A Ribosomal protein S6E (S10) [Translation, ribosomal structure and biogenesis] 99.93::1-89 PF01092::Ribosomal_S6e 100.00::1-90 GO:0022627::cytosolic small ribosomal subunit confident hh_3u5c_G_1::1-109,114-114,116-119,123-143 very confident psy353 1363 Q8IWV8::E3 ubiquitin-protein ligase UBR2 ::E3 ubiquitin-protein ligase which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. Plays a critical role in chromatin inactivation and chromosome-wide transcriptional silencing during meiosis via ubiquitination of histone H2A. Binds leucine and is a negative regulator of the leucine-mTOR signaling pathway, thereby controlling cell growth.::Homo sapiens (taxid: 9606) portable COG2127::Uncharacterized conserved protein [Function unknown] 94.84::299-352 PF02207::zf-UBR 99.76::117-187 GO:0044446::intracellular organelle part confident hh_3ny3_A_1::114-187 confident psy17685 286 Q9W1K5::Sestrin homolog ::::Drosophila melanogaster (taxid: 7227) confident COG2128::Uncharacterized conserved protein [Function unknown] 99.62::113-255 PF04636::PA26 100.00::93-269 GO:0044699::single-organism process confident hh_2prr_A_1::98-257 confident psy12823 295 Q5REB1::Metallophosphoesterase MPPED2 ::Displays low metallophosphoesterase activity (in vitro). May play a role in the development of the nervous system.::Pongo abelii (taxid: 9601) confident COG2129::Predicted phosphoesterases, related to the Icc protein [General function prediction only] 99.93::40-273 PF14582::Metallophos_3 99.84::40-274 GO:0016787::hydrolase activity confident hh_3rl5_A_1::1-57,60-117,121-125,131-140,146-291 very confident psy6804 207 Q5M9G0::Deoxycytidylate deaminase ::Supplies the nucleotide substrate for thymidylate synthetase.::Rattus norvegicus (taxid: 10116) confident COG2131::ComEB Deoxycytidylate deaminase [Nucleotide transport and metabolism] 99.97::88-205 PF00383::dCMP_cyt_deam_1 99.95::89-200 GO:0008270::zinc ion binding confident hh_2w4l_A_1::82-201 very confident psy9698 123 Q09920::Iron transport multicopper oxidase fio1 ::Could be a iron transport multicopper oxidase, which is required for Fe(2+) high affinity uptake. May be required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 99.24::38-87 PF07731::Cu-oxidase_2 99.81::32-88 GO:0000329::fungal-type vacuole membrane confident hh_3t6v_A_1::34-87,89-106 very confident psy16562 445 Q6CII3::Iron transport multicopper oxidase FET3 ::Iron transport multicopper ferroxidase required for Fe(2+) high affinity uptake. Required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::88-445 PF07732::Cu-oxidase_3 100.00::91-200 GO:0000329::fungal-type vacuole membrane confident hh_3zx1_A_1::53-68,90-129,131-144,147-152,156-203,209-213,216-255,267-275,278-287,289-334,336-414,417-445 very confident psy6774 140 Q09920::Iron transport multicopper oxidase fio1 ::Could be a iron transport multicopper oxidase, which is required for Fe(2+) high affinity uptake. May be required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 99.87::6-135 PF07732::Cu-oxidase_3 99.95::3-73 GO:0005576::extracellular region confident hh_3t6v_A_1::4-74,77-105,111-133 very confident psy88 75 Q6CII3::Iron transport multicopper oxidase FET3 ::Iron transport multicopper ferroxidase required for Fe(2+) high affinity uptake. Required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 99.79::1-75 PF07732::Cu-oxidase_3 99.97::2-75 GO:0005576::extracellular region confident hh_1hfu_A_1::2-75 very confident psy7532 235 Q6CII3::Iron transport multicopper oxidase FET3 ::Iron transport multicopper ferroxidase required for Fe(2+) high affinity uptake. Required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 99.89::6-167 PF07732::Cu-oxidase_3 99.94::3-73 GO:0005576::extracellular region confident hh_3t6v_A_1::4-75,78-105,111-133,137-211 very confident psy4302 613 P43561::Iron transport multicopper oxidase FET5 ::Iron transport multicopper oxidase, which is required for Fe(2+) high affinity uptake. May be required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::53-573 PF07732::Cu-oxidase_3 100.00::54-164 GO:0009505::plant-type cell wall confident hh_3zx1_A_1::17-32,54-93,95-107,110-116,120-167,173-177,180-219,233-241,244-253,255-292,297-326,329-330,334-336,343-351,360-375,379-380,389-411,413-413,450-468,470-470,474-498,522-573 very confident psy12112 246 Q6CII3::Iron transport multicopper oxidase FET3 ::Iron transport multicopper ferroxidase required for Fe(2+) high affinity uptake. Required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 99.78::148-245 PF07732::Cu-oxidase_3 99.97::148-243 GO:0040003::chitin-based cuticle development confident hh_3sqr_A_1::102-127,135-245 very confident psy16567 127 Q09920::Iron transport multicopper oxidase fio1 ::Could be a iron transport multicopper oxidase, which is required for Fe(2+) high affinity uptake. May be required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 99.87::12-126 PF07732::Cu-oxidase_3 100.00::16-125 GO:0046658::anchored to plasma membrane confident hh_3t6v_A_1::16-125 very confident psy978 695 Q09920::Iron transport multicopper oxidase fio1 ::Could be a iron transport multicopper oxidase, which is required for Fe(2+) high affinity uptake. May be required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG2132::SufI Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::56-588 PF07732::Cu-oxidase_3 100.00::58-166 GO:0055070::copper ion homeostasis confident hh_3gdc_A_1::22-36,57-94,96-108,112-169,176-180,182-193 very confident psy16424 295 O13823::U3 small nucleolar ribonucleoprotein protein imp4 ::Component of the U3 small nucleolar ribonucleoprotein. Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) very confident COG2136::IMP4 Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain [Translation, ribosomal structure and biogenesis / RNA processing and modification] 100.00::94-274 PF04427::Brix 100.00::98-268 GO:0016363::nuclear matrix very confident hh_2cxh_A_1::80-87,89-198,200-225 very confident psy10707 130 Q95123::Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial ::Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).::Bos taurus (taxid: 9913) confident COG2142::SdhD Succinate dehydrogenase, hydrophobic anchor subunit [Energy production and conversion] 99.14::24-99 PF05328::CybS 100.00::22-126 GO:0002119::nematode larval development confident hh_3vr8_D_1::23-127 very confident psy17505 199 P84100::60S ribosomal protein L19 ::::Rattus norvegicus (taxid: 10116) very confident COG2147::RPL19A Ribosomal protein L19E [Translation, ribosomal structure and biogenesis] 100.00::1-149 PF01280::Ribosomal_L19e 100.00::2-149 GO:0022625::cytosolic large ribosomal subunit very confident hh_4a1a_O_1::1-178 very confident psy281 162 Q9D187::Mitotic spindle-associated MMXD complex subunit MIP18 ::As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation.::Mus musculus (taxid: 10090) very confident COG2151::PaaD Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only] 99.92::34-136 PF01883::DUF59 99.76::39-115 GO:0097361::CIA complex very confident hh_3ux2_A_1::38-156 very confident psy16125 162 Q9D187::Mitotic spindle-associated MMXD complex subunit MIP18 ::As part of the mitotic spindle-associated MMXD complex it plays a role in chromosome segregation.::Mus musculus (taxid: 10090) very confident COG2151::PaaD Predicted metal-sulfur cluster biosynthetic enzyme [General function prediction only] 99.92::34-136 PF01883::DUF59 99.76::39-115 GO:0097361::CIA complex very confident hh_3ux2_A_1::38-156 very confident psy14675 105 B2T7M8::Putative pterin-4-alpha-carbinolamine dehydratase ::::Burkholderia phytofirmans (strain DSM 17436 / PsJN) (taxid: 398527) very confident COG2154::Pterin-4a-carbinolamine dehydratase [Coenzyme metabolism] 100.00::5-104 PF01329::Pterin_4a 100.00::5-101 GO:0055114::oxidation-reduction process very confident hh_1ru0_A_1::3-103 very confident psy10335 177 P41093::60S ribosomal protein L18a ::::Drosophila melanogaster (taxid: 7227) very confident COG2157::RPL20A Ribosomal protein L20A (L18A) [Translation, ribosomal structure and biogenesis] 99.96::70-153 PF01775::Ribosomal_L18ae 100.00::7-130 GO:0000022::mitotic spindle elongation very confident hh_3u5e_S_1::5-161,164-176 very confident psy2461 462 Q2YGT9::60S ribosomal protein L6 ::::Sus scrofa (taxid: 9823) confident COG2163::RPL14A Ribosomal protein L14E/L6E/L27E [Translation, ribosomal structure and biogenesis] 99.74::180-307 PF01159::Ribosomal_L6e 100.00::221-333 GO:0003735::structural constituent of ribosome confident no hit no match psy3013 151 Q7ZV82::60S ribosomal protein L27 ::::Danio rerio (taxid: 7955) confident COG2163::RPL14A Ribosomal protein L14E/L6E/L27E [Translation, ribosomal structure and biogenesis] 99.77::33-151 PF01777::Ribosomal_L27e 99.93::84-151 GO:0022625::cytosolic large ribosomal subunit very confident hh_4a18_N_1::33-133,135-151 very confident psy2756 112 P36105::60S ribosomal protein L14-A ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG2163::RPL14A Ribosomal protein L14E/L6E/L27E [Translation, ribosomal structure and biogenesis] 99.94::13-110 PF01929::Ribosomal_L14e 99.87::55-112 GO:0003723::RNA binding confident no hit no match psy5233 178 Q8L8W6::60S ribosomal protein L39-2 ::::Arabidopsis thaliana (taxid: 3702) confident COG2167::RPL39 Ribosomal protein L39E [Translation, ribosomal structure and biogenesis] 99.93::128-178 PF00832::Ribosomal_L39 99.92::136-178 GO:0022625::cytosolic large ribosomal subunit very confident hh_4a18_B_1::128-178 very confident psy11112 632 P97494::Glutamate--cysteine ligase catalytic subunit ::::Mus musculus (taxid: 10090) confident COG2170::Uncharacterized conserved protein [Function unknown] 91.04::78-149 PF03074::GCS 100.00::70-512 GO:0006750::glutathione biosynthetic process confident hh_3ig5_A_1::18-112,137-350,353-353,412-537 very confident psy3939 123 P40525::60S ribosomal protein L34-B ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG2174::RPL34A Ribosomal protein L34E [Translation, ribosomal structure and biogenesis] 100.00::4-85 PF01199::Ribosomal_L34e 100.00::5-79 GO:0005774::vacuolar membrane confident hh_4a18_L_1::4-99 very confident psy17350 528 O94443::Uncharacterized exonuclease C637.09 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2176::PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] 99.86::361-526 PF00929::RNase_T 99.83::365-514 GO:0004527::exonuclease activity confident rp_1wlj_A_1::358-422,424-438,440-518 very confident psy3897 240 Q8IX06::Exonuclease GOR ::::Homo sapiens (taxid: 9606) confident COG2176::PolC DNA polymerase III, alpha subunit (gram-positive type) [DNA replication, recombination, and repair] 99.90::76-235 PF00929::RNase_T 99.88::81-228 GO:0042771::intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator confident hh_1wlj_A_1::77-140,143-155,157-234 very confident psy10790 127 O74955::Translin-associated protein X homolog ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2178::Predicted RNA-binding protein of the translin family [Translation, ribosomal structure and biogenesis] 99.01::35-125 PF01997::Translin 99.84::49-125 GO:0005737::cytoplasm confident hh_3axj_B_1::26-125 very confident psy10794 273 Q9QZE7::Translin-associated protein X ::Possible role in spermatogenesis.::Mus musculus (taxid: 10090) confident COG2178::Predicted RNA-binding protein of the translin family [Translation, ribosomal structure and biogenesis] 100.00::35-253 PF01997::Translin 100.00::49-251 GO:0032403::protein complex binding confident hh_3axj_A_1::30-97,99-157,162-194,196-220,222-255 very confident psy8548 102 Q9ULD8::Potassium voltage-gated channel subfamily H member 3 ::Pore-forming (alpha) subunit of voltage-gated potassium channel. Elicits an outward current with fast inactivation. Channel properties may be modulated by cAMP and subunit assembly.::Homo sapiens (taxid: 9606) confident COG2202::AtoS FOG: PAS/PAC domain [Signal transduction mechanisms] 97.02::2-86 PF13426::PAS_9 99.55::2-86 GO:0005887::integral to plasma membrane confident hh_1byw_A_1::2-14,16-39,42-86 very confident psy10825 140 O15516::Circadian locomoter output cycles protein kaput ::ARNTL/2-CLOCK heterodimers activate E-box element (3'-CACGTG-5') transcription of a number of proteins of the circadian clock. Activates transcription of PER1 and PER2. This transcription is inhibited in a feedback loop by PER and CRY proteins. Has intrinsic histone acetyltransferase activity and this enzymatic function contributes to chromatin-remodeling events implicated in circadian control of gene expression (By similarity). Acetylates primarily histones H3 and H4 (By similarity). Acetylates also a non-histone substrate: ARNTL (By similarity). Plays a role in DNA damage response (DDR) signaling during the S phase.::Homo sapiens (taxid: 9606) confident COG2202::AtoS FOG: PAS/PAC domain [Signal transduction mechanisms] 97.52::7-111 PF14598::PAS_11 99.91::8-112 GO:0003690::double-stranded DNA binding confident rp_4f3l_A_1::21-110 very confident psy8265 630 P35869::Aryl hydrocarbon receptor ::Ligand-activated transcriptional activator. Binds to the XRE promoter region of genes it activates. Activates the expression of multiple phase I and II xenobiotic chemical metabolizing enzyme genes (such as the CYP1A1 gene). Mediates biochemical and toxic effects of halogenated aromatic hydrocarbons. Involved in cell-cycle regulation. Likely to play an important role in the development and maturation of many tissues.::Homo sapiens (taxid: 9606) portable COG2202::AtoS FOG: PAS/PAC domain [Signal transduction mechanisms] 96.37::278-381 PF14598::PAS_11 99.92::276-381 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity confident hh_4f3l_B_1::110-128,131-164,172-197,203-381 very confident psy8796 536 Q9VFI9::cGMP-specific 3',5'-cyclic phosphodiesterase ::Has a role regulating cGMP transport in Malpighian tubule principal cells.::Drosophila melanogaster (taxid: 7227) confident COG2203::FhlA FOG: GAF domain [Signal transduction mechanisms] 94.07::18-67 PF00233::PDEase_I 100.00::143-381 GO:0016324::apical plasma membrane confident hh_3bjc_A_1::1-46,48-66,68-394 very confident psy678 60 Q9HCR9::Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A ::Plays a role in signal transduction by regulating the intracellular concentration of cyclic nucleotides cAMP and cGMP. Catalyzes the hydrolysis of both cAMP and cGMP to 5'-AMP and 5'-GMP, respectively.::Homo sapiens (taxid: 9606) confident COG2203::FhlA FOG: GAF domain [Signal transduction mechanisms] 91.29::14-58 PF01590::GAF 96.74::29-59 GO:0043204::perikaryon confident hh_2e4s_A_1::5-59 confident psy1694 247 Q9ER41::Torsin-1B ::May serve as a molecular chaperone assisting in the proper folding of secreted and/or membrane proteins.::Mus musculus (taxid: 10090) confident COG2204::AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] 99.95::29-246 PF06309::Torsin 99.97::51-184 GO:0005635::nuclear envelope confident hh_1sxj_D_1::79-96,101-102,106-107,109-134,137-151,157-206,214-227 confident psy15159 238 O59868::Calcium-transporting ATPase 1 ::Transports calcium and manganese ions into the cell. Regulates cell morphogenesis through control of manganese and calcium homeostasis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG2217::ZntA Cation transport ATPase [Inorganic ion transport and metabolism] 100.00::3-238 PF00122::E1-E2_ATPase 99.97::25-238 GO:0005509::calcium ion binding confident hh_2zxe_A_1::23-55,57-96,99-117,140-238 very confident psy410 93 Q12697::Vacuolar cation-transporting ATPase YPK9 ::Vacuolar transporter which plays a role in sequestration of divalent heavy metal ions.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG2217::ZntA Cation transport ATPase [Inorganic ion transport and metabolism] 99.82::2-87 PF00702::Hydrolase 98.74::31-86 GO:0005764::lysosome confident hh_2zxe_A_1::2-54 confident psy16665 71 A1Z8N1::Facilitated trehalose transporter Tret1-1 ::Low-capacity facilitative transporter for trehalose. Does not transport maltose, sucrose or lactose. Mediates the bidirectional transfer of trehalose. Responsible for the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source, thereby regulating trehalose levels in the hemolymph.::Drosophila melanogaster (taxid: 7227) portable COG2223::NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] 96.14::3-34 PF00083::Sugar_tr 98.04::2-71 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::2-37,45-71 confident psy14099 224 Q8IZD6::Solute carrier family 22 member 15 ::Probably transports organic cations (By similarity). Appears not to be the agmatine transporter.::Homo sapiens (taxid: 9606) portable COG2223::NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] 95.47::62-105 PF00083::Sugar_tr 98.26::2-106 GO:0071702::organic substance transport confident hh_4aps_A_1::3-31,33-35,37-37,44-46,48-105 portable psy17792 116 Q8IRI6::Glucose transporter type 1 ::Facilitative glucose transporter.::Drosophila melanogaster (taxid: 7227) confident COG2223::NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] 98.90::15-112 PF12832::MFS_1_like 98.93::37-101 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::27-112 confident psy890 131 A6UFF7::Ubiquinone/menaquinone biosynthesis methyltransferase ubiE ::Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).::Sinorhizobium medicae (strain WSM419) (taxid: 366394) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.95::1-129 PF01209::Ubie_methyltran 99.94::2-129 GO:0005739::mitochondrion confident hh_3mgg_A_1::1-22,34-60,66-122 very confident psy889 167 A6UFF7::Ubiquinone/menaquinone biosynthesis methyltransferase ubiE ::Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).::Sinorhizobium medicae (strain WSM419) (taxid: 366394) portable COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.91::1-165 PF01209::Ubie_methyltran 99.89::1-166 GO:0005759::mitochondrial matrix confident hh_3mgg_A_1::1-21,33-59,101-158 very confident psy11741 352 Q86BS6::Methyltransferase-like protein ::Probable methyltransferase.::Drosophila melanogaster (taxid: 7227) very confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.92::56-270 PF01209::Ubie_methyltran 99.92::56-271 GO:0005829::cytosol confident hh_3i9f_A_1::108-128,133-152,157-166,168-168,175-193,196-226,244-262,265-272 very confident psy1107 218 Q8TCB7::Methyltransferase-like protein 6 ::Probable methyltransferase.::Homo sapiens (taxid: 9606) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.88::79-197 PF01209::Ubie_methyltran 99.83::61-196 GO:0005829::cytosol confident hh_3i9f_A_1::77-101,104-122,127-136,144-164,167-194 very confident psy1420 241 A6UFF7::Ubiquinone/menaquinone biosynthesis methyltransferase ubiE ::Methyltransferase required for the conversion of demethylmenaquinone (DMKH2) to menaquinone (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2).::Sinorhizobium medicae (strain WSM419) (taxid: 366394) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 100.00::3-241 PF01209::Ubie_methyltran 99.97::3-240 GO:0070887::cellular response to chemical stimulus confident hh_1xxl_A_1::32-58,72-76,96-118,144-148,151-229 very confident psy17742 597 Q9D0L8::mRNA cap guanine-N7 methyltransferase ::mRNA-capping methyltransferase that methylates the N7 position of the added guanosine to the 5'-cap structure of mRNAs. Binds RNA containing 5'-terminal GpppC.::Mus musculus (taxid: 10090) portable COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.75::233-486 PF03291::Pox_MCEL 100.00::235-537 GO:0005845::mRNA cap binding complex confident hh_3bgv_A_1::258-288,291-344,350-437,440-537 very confident psy10644 196 Q5U4F0::Ribosomal RNA-processing protein 8 ::Essential component of the eNoSC (energy-dependent nucleolar silencing) complex, a complex that mediates silencing of rDNA in response to intracellular energy status and acts by recruiting histone-modifying enzymes. The eNoSC complex is able to sense the energy status of cell: upon glucose starvation, elevation of NAD(+)/NADP(+) ratio activates SIRT1, leading to histone H3 deacetylation followed by dimethylation of H3 at 'Lys-9' (H3K9me2) by SUV39H1 and the formation of silent chromatin in the rDNA locus. In the complex, RRP8 binds to H3K9me2 and probably acts as a methyltransferase. Its substrates are however unknown.::Rattus norvegicus (taxid: 10116) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.79::118-196 PF05148::Methyltransf_8 100.00::45-196 GO:0005677::chromatin silencing complex confident hh_2zfu_A_1::50-115,118-136,138-196 very confident psy1769 1662 Q0J2C6::Probable protein arginine N-methyltransferase 1 ::Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in a glycine and arginine-rich domain (can methylate histones).::Oryza sativa subsp. japonica (taxid: 39947) portable COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.52::1401-1536 PF05185::PRMT5 99.95::1389-1661 GO:0005829::cytosol confident hh_3q7e_A_1::1372-1415,1426-1488,1490-1491,1494-1569,1574-1643,1654-1662 very confident psy14674 519 Q0J2C6::Probable protein arginine N-methyltransferase 1 ::Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in a glycine and arginine-rich domain (can methylate histones).::Oryza sativa subsp. japonica (taxid: 39947) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.68::64-184 PF05185::PRMT5 100.00::52-362 GO:0005829::cytosol confident hh_3q7e_A_1::31-143,146-189,220-393 very confident psy8370 256 O13748::Alpha N-terminal protein methyltransferase 1 ::Alpha-N-methyltransferase that methylates the N-terminus of target proteins containing the N-terminal motif [Ala/Pro/Ser]-Pro-Lys when the initiator Met is cleaved. Specifically catalyzes mono-, di- or tri-methylation of exposed alpha-amino group of Ala or Ser residue in the [Ala/Ser]-Pro-Lys motif and mono- or di-methylation of Pro in the Pro-Pro-Lys motif.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.89::78-226 PF05891::Methyltransf_PK 100.00::30-246 GO:0005829::cytosol confident hh_1xtp_A_1::30-63,68-73,75-127,129-131,133-147,150-246 very confident psy3185 298 Q5BJZ6::UPF0586 protein C9orf41 homolog ::::Rattus norvegicus (taxid: 10116) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.84::73-296 PF07942::N2227 100.00::68-298 GO:0005829::cytosol confident hh_3g2m_A_1::102-113,119-165,202-220,222-259 very confident psy17227 268 Q8TEK3::Histone-lysine N-methyltransferase, H3 lysine-79 specific ::Histone methyltransferase. Methylates 'Lys-79' of histone H3. Nucleosomes are preferred as substrate compared to free histones. Binds to DNA.::Homo sapiens (taxid: 9606) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.93::8-173 PF08123::DOT1 99.95::15-186 GO:0046425::regulation of JAK-STAT cascade confident hh_3uwp_A_1::2-190 very confident psy4109 77 Q55DA6::Probable methyltransferase WBSCR22 homolog ::Probable DNA methyltransferase.::Dictyostelium discoideum (taxid: 44689) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.33::1-74 PF08241::Methyltransf_11 99.28::1-75 GO:0005829::cytosol confident hh_1vl5_A_1::1-25,27-51,63-74 confident psy8023 88 Q42539::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. This enzyme does not act on D-aspartyl residues.::Arabidopsis thaliana (taxid: 3702) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.60::15-83 PF12847::Methyltransf_18 99.69::16-81 GO:0005829::cytosol confident hh_1i1n_A_1::4-84 very confident psy8709 319 Q08A71::Probable protein arginine N-methyltransferase 6 ::Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA).::Arabidopsis thaliana (taxid: 3702) confident COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.78::187-307 PF12847::Methyltransf_18 99.77::201-309 GO:0043234::protein complex confident hh_3q7e_A_1::108-149,203-318 very confident psy9773 252 Q6PAK3::Protein arginine N-methyltransferase 8 ::Membrane-associated arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and asymmetrical dimethylarginine (aDMA). Able to mono- and dimethylate EWS protein; however its precise role toward EWS remains unclear as it still interacts with fully methylated EWS.::Mus musculus (taxid: 10090) portable COG2226::UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] 99.66::34-153 PF12847::Methyltransf_18 99.59::49-148 GO:0043234::protein complex confident hh_3r0q_C_1::8-61,64-65,74-182 very confident psy1134 149 Q2KHT8::Probable dimethyladenosine transferase ::Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 18S rRNA in the 40S particle.::Bos taurus (taxid: 9913) confident COG2227::UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] 99.66::9-145 PF02353::CMAS 99.41::36-145 GO:0030686::90S preribosome confident hh_2h1r_A_1::18-92 very confident psy5241 132 Q7L2J0::7SK snRNA methylphosphate capping enzyme ::S-adenosyl-L-methionine-dependent methyltransferase that adds a methylphosphate cap at the 5'-end of 7SK snRNA, leading to stabilize it.::Homo sapiens (taxid: 9606) confident COG2227::UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] 94.57::4-97 PF06859::Bin3 100.00::5-113 GO:0040031::snRNA modification confident hh_3g07_A_1::2-116 very confident psy11730 496 Q9VD28::Bifunctional arginine demethylase and lysyl-hydroxylase PSR ::Dioxygenase that can both act as a histone arginine demethylase and a lysyl-hydroxylase.::Drosophila melanogaster (taxid: 7227) confident COG2227::UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] 99.49::245-389 PF13621::Cupin_8 99.94::65-195 GO:0070815::peptidyl-lysine 5-dioxygenase activity confident hh_3k2o_A_1::11-203,381-495 very confident psy2161 155 P0C951::Small COPII coat GTPase SAR1 ::Small GTPase component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules. Sar1 controls the coat assembly in a stepwise manner. Activated Sar1-GTP binds to membranes first and recruits the sec23/24 complex. These sec23/24-sar1 prebudding intermediates are then collected by the Sec13/31 complex as subunits polymerize to form coated transport vesicles. Conversion to sar1-GDP triggers coat release and recycles COPII subunits.::Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) confident COG2229::Predicted GTPase [General function prediction only] 99.69::12-152 PF00025::Arf 99.97::2-154 GO:0005829::cytosol very confident rp_1f6b_A_1::1-155 very confident psy17510 113 P62330::ADP-ribosylation factor 6 ::GTP-binding protein involved in protein trafficking; regulates endocytic recycling and cytoskeleton remodeling. May modulate vesicle budding and uncoating within the Golgi apparatus. Functions as an allosteric activator of the cholera toxin catalytic subunit, an ADP-ribosyltransferase. Involved in the regulation of dendritic spine development (By similarity). Contributes to the regulation of dendritic branching and filopodia extension.::Homo sapiens (taxid: 9606) very confident COG2229::Predicted GTPase [General function prediction only] 99.69::1-110 PF00025::Arf 99.92::1-111 GO:0005829::cytosol very confident rp_3lvq_E_1::1-112 very confident psy6566 126 Q9D4P0::ADP-ribosylation factor-like protein 5B ::Binds and exchanges GTP and GDP.::Mus musculus (taxid: 10090) very confident COG2229::Predicted GTPase [General function prediction only] 99.73::9-126 PF00025::Arf 99.94::2-126 GO:0005829::cytosol confident rp_2h17_A_1::1-126 very confident psy12794 106 P25160::ADP-ribosylation factor-like protein 1 ::Binds and hydrolyzes GTP. Does not act as an allosteric activator of the cholera toxin catalytic subunit.::Drosophila melanogaster (taxid: 7227) confident COG2229::Predicted GTPase [General function prediction only] 99.27::2-101 PF00025::Arf 99.89::1-102 GO:0043234::protein complex confident rp_1upt_A_1::1-104 very confident psy10891 142 Q63481::Ras-related protein Rab-7L1 ::::Rattus norvegicus (taxid: 10116) confident COG2229::Predicted GTPase [General function prediction only] 99.56::1-110 PF00071::Ras 99.87::1-112 GO:0019003::GDP binding confident hh_2hup_A_1::1-48,53-116 very confident psy2408 298 Q9ZSK1::Tocopherol O-methyltransferase, chloroplastic ::Involved in the synthesis of tocopherol (vitamin E). Methylates gamma- and delta-tocopherol to form beta- and alpha-tocopherol, respectively.::Arabidopsis thaliana (taxid: 3702) portable COG2230::Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] 100.00::25-288 PF02353::CMAS 100.00::28-288 GO:0044710::single-organism metabolic process confident hh_3bus_A_1::30-42,44-246,248-281,284-298 very confident psy14449 673 Q9UHI7::Solute carrier family 23 member 1 ::Sodium/ascorbate cotransporter. Mediates electrogenic uptake of vitamin C, with a stoichiometry of 2 Na(+) for each ascorbate.::Homo sapiens (taxid: 9606) confident COG2233::UraA Xanthine/uracil permeases [Nucleotide transport and metabolism] 100.00::183-617 PF00860::Xan_ur_permease 100.00::192-571 GO:0043229::intracellular organelle confident hh_3qe7_A_1::180-216,221-222,225-226,234-331,352-378,392-404,408-472,474-569,574-576,590-621 very confident psy571 162 Q16769::Glutaminyl-peptide cyclotransferase ::Responsible for the biosynthesis of pyroglutamyl peptides. Has a bias against acidic and tryptophan residues adjacent to the N-terminal glutaminyl residue and a lack of importance of chain length after the second residue. Also catalyzes N-terminal pyroglutamate formation. In vitro, catalyzes pyroglutamate formation of N-terminally truncated form of APP amyloid-beta peptides [Glu-3]-beta-amyloid. May be involved in the N-terminal pyroglutamate formation of several amyloid-related plaque-forming peptides.::Homo sapiens (taxid: 9606) portable COG2234::Iap Predicted aminopeptidases [General function prediction only] 99.75::5-99 PF04389::Peptidase_M28 99.89::3-105 GO:0008270::zinc ion binding confident hh_3pb6_X_1::3-77,81-134,139-162 very confident psy15910 404 Q16769::Glutaminyl-peptide cyclotransferase ::Responsible for the biosynthesis of pyroglutamyl peptides. Has a bias against acidic and tryptophan residues adjacent to the N-terminal glutaminyl residue and a lack of importance of chain length after the second residue. Also catalyzes N-terminal pyroglutamate formation. In vitro, catalyzes pyroglutamate formation of N-terminally truncated form of APP amyloid-beta peptides [Glu-3]-beta-amyloid. May be involved in the N-terminal pyroglutamate formation of several amyloid-related plaque-forming peptides.::Homo sapiens (taxid: 9606) portable COG2234::Iap Predicted aminopeptidases [General function prediction only] 99.64::215-342 PF04389::Peptidase_M28 99.86::231-351 GO:0017186::peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase confident hh_4f9u_A_1::188-376,384-403 very confident psy5605 152 P39018::40S ribosomal protein S19a ::::Drosophila melanogaster (taxid: 7227) very confident COG2238::RPS19A Ribosomal protein S19E (S16A) [Translation, ribosomal structure and biogenesis] 100.00::3-133 PF01090::Ribosomal_S19e 100.00::2-131 GO:0022627::cytosolic small ribosomal subunit very confident hh_3iz6_S_1::2-131 very confident psy11349 360 A5UA83::Pyridoxamine kinase ::Phosphorylates B6 vitamers; functions in a salvage pathway. Uses pyridoxamine.::Haemophilus influenzae (strain PittEE) (taxid: 374930) confident COG2240::PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism] 100.00::89-347 PF08543::Phos_pyr_kin 100.00::108-350 GO:0005829::cytosol confident hh_3pzs_A_1::88-282,287-318,320-346 very confident psy2281 287 Q8R323::Replication factor C subunit 3 ::The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1.::Mus musculus (taxid: 10090) confident COG2256::MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] 100.00::2-285 PF05496::RuvB_N 99.94::3-166 GO:0006200::ATP catabolic process confident hh_1sxj_E_1::1-275 very confident psy4285 533 Q8ZYK4::Replication factor C small subunit 1 ::Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA.::Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) (taxid: 178306) confident COG2256::MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] 99.88::288-514 PF13177::DNA_pol3_delta2 99.86::289-431 GO:0005875::microtubule associated complex confident rp_1sxj_C_1::296-331,333-441 very confident psy5727 303 O15260::Surfeit locus protein 4 ::May play a role in the maintenance of the architecture of the endoplasmic reticulum-Golgi intermediate compartment and of the Golgi.::Homo sapiens (taxid: 9606) very confident COG2259::Predicted membrane protein [Function unknown] 99.62::185-301 PF02077::SURF4 100.00::15-303 GO:0045169::fusome confident no hit no match psy7862 101 Q6DRH5::H/ACA ribonucleoprotein complex subunit 3 ::Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.::Danio rerio (taxid: 7955) confident COG2260::Predicted Zn-ribbon RNA-binding protein [Translation, ribosomal structure and biogenesis] 99.93::38-95 PF04135::Nop10p 99.96::40-90 GO:0031429::box H/ACA snoRNP complex confident hh_1y2y_A_1::38-95 very confident psy2977 92 Q9CQW2::ADP-ribosylation factor-like protein 8B ::May play a role in lysosomes motility. Alternatively, may play a role in chromosome segregation.::Mus musculus (taxid: 10090) confident COG2262::HflX GTPases [General function prediction only] 99.15::1-89 PF00025::Arf 99.86::1-87 GO:0051233::spindle midzone confident hh_1zd9_A_1::1-91 very confident psy50 505 O43824::Putative GTP-binding protein 6 ::::Homo sapiens (taxid: 9606) confident COG2262::HflX GTPases [General function prediction only] 100.00::84-498 PF13167::GTP-bdg_N 99.96::105-199 GO:0005525::GTP binding confident hh_2qtf_A_1::107-122,124-134,136-153,158-167,169-300,302-322,324-389,393-440 very confident psy17460 216 Q57732::Uncharacterized protein MJ0284 ::::Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) confident COG2263::Predicted RNA methylase [Translation, ribosomal structure and biogenesis] 100.00::4-212 PF03602::Cons_hypoth95 99.79::24-207 GO:0003676::nucleic acid binding confident hh_1wy7_A_1::3-13,15-44,46-97,99-107,110-113,119-171,173-174,176-212 very confident psy13204 189 Q923W1::Trimethylguanosine synthase ::Catalyzes the 2 serial methylation steps for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure. The enzyme is specific for guanine, and N7 methylation must precede N2 methylation. Hypermethylation of the m7G cap of U snRNAs leads to their concentration in nuclear foci, their colocalization with coilin and the formation of canonical Cajal bodies (CBs). Plays a role in transcriptional regulation.::Mus musculus (taxid: 10090) confident COG2263::Predicted RNA methylase [Translation, ribosomal structure and biogenesis] 99.71::37-142 PF09445::Methyltransf_15 99.90::65-188 GO:0036261::7-methylguanosine cap hypermethylation confident hh_3gdh_A_1::36-157,160-188 very confident psy15742 342 Q12052::Trimethylguanosine synthase ::Catalyzes the two serial methylation steps for the conversion of the 7-monomethylguanosine (m(7)G) caps of snRNAs and snoRNAs to a 2,2,7-trimethylguanosine (m(2,2,7)G) cap structure. The enzyme is specific for guanine, and N7 methylation must precede N2 methylation. Hypermethylates the m3G cap on TLC1 telomerase which affects telomere silencing and telomere length regulation. Required for pre-mRNA splicing, pre-rRNA processing and small ribosomal subunit synthesis. Involved in nucleolar structural organization.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG2265::TrmA SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis] 99.87::170-341 PF09445::Methyltransf_15 99.88::192-317 GO:0036261::7-methylguanosine cap hypermethylation confident hh_3gdh_A_1::108-163,187-283,286-324 very confident psy545 531 P06857::Inactive pancreatic lipase-related protein 1 ::May function as inhibitor of dietary triglyceride digestion. Lacks detectable lipase activity towards triglycerides, diglycerides, phosphatidylcholine, galactolipids or cholesterol esters (in vitro).::Canis familiaris (taxid: 9615) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 98.83::111-219 PF00151::Lipase 100.00::41-376 GO:0005615::extracellular space confident hh_1rp1_A_1::41-283,286-344,347-389,391-391,396-420,424-454,457-460,468-484 very confident psy16598 247 Q9BDJ4::Lipase member H ::Hydrolyzes specifically phosphatidic acid (PA) to produce lysophosphatidic acid (LPA).::Oryctolagus cuniculus (taxid: 9986) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.41::11-138 PF00151::Lipase 100.00::4-245 GO:0006644::phospholipid metabolic process confident hh_1bu8_A_1::4-70,72-145,147-217,219-246 very confident psy16575 247 Q9BDJ4::Lipase member H ::Hydrolyzes specifically phosphatidic acid (PA) to produce lysophosphatidic acid (LPA).::Oryctolagus cuniculus (taxid: 9986) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.41::11-138 PF00151::Lipase 100.00::4-245 GO:0006644::phospholipid metabolic process confident hh_1bu8_A_1::4-70,72-145,147-217,219-246 very confident psy5002 417 P11151::Lipoprotein lipase ::The primary function of this lipase is the hydrolysis of triglycerides of circulating chylomicrons and very low density lipoproteins (VLDL). Binding to heparin sulfate proteogylcans at the cell surface is vital to the function. The apolipoprotein, APOC2, acts as a coactivator of LPL activity in the presence of lipids on the luminal surface of vascular endothelium.::Bos taurus (taxid: 9913) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 98.35::151-238 PF00151::Lipase 100.00::140-364 GO:0016042::lipid catabolic process confident hh_1bu8_A_1::143-170,172-223,225-283,285-369 very confident psy2108 345 P81139::Pancreatic lipase-related protein 2 ::Lipase with broad substrate specificity. Can hydrolyze both phospholipids and galactolipids. Acts preferentially on monoglycerides, phospholipids and galactolipids. Contributes to milk fat hydrolysis.::Cavia porcellus (taxid: 10141) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.04::37-144 PF00151::Lipase 100.00::11-275 GO:0016042::lipid catabolic process confident hh_1bu8_A_1::11-76,78-130,132-290,295-329 very confident psy18203 316 P50903::Pancreatic triacylglycerol lipase ::::Cavia porcellus (taxid: 10141) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 98.83::63-196 PF00151::Lipase 100.00::1-316 GO:0046503::glycerolipid catabolic process confident hh_1bu8_A_1::1-10,12-46,48-89,110-127,129-181,185-205,208-269,271-292,298-308,310-316 very confident psy2283 604 P81139::Pancreatic lipase-related protein 2 ::Lipase with broad substrate specificity. Can hydrolyze both phospholipids and galactolipids. Acts preferentially on monoglycerides, phospholipids and galactolipids. Contributes to milk fat hydrolysis.::Cavia porcellus (taxid: 10141) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 97.81::67-205 PF00151::Lipase 100.00::43-378 GO:0046503::glycerolipid catabolic process confident hh_1bu8_A_1::43-86,104-188,193-271,273-327,331-346,360-380,401-411,419-422,463-469,495-503,525-525,527-532,544-573,575-579,584-603 very confident psy15133 229 Q5E9H0::Phospholipase A1 member A ::Hydrolyzes the ester bond at the sn-1 position of glycerophospholipids and produces 2-acyl lysophospholipids. Hydrolyzes phosphatidylserine (PS) in the form of liposomes and 1-acyl-2 lysophosphatidylserine (lyso-PS), but not triolein, phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidic acid (PA) or phosphatidylinositol (PI). Hydrolysis of lyso-PS in peritoneal mast cells activated by receptors for IgE leads to stimulate histamine production.::Bos taurus (taxid: 9913) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 98.40::7-98 PF00151::Lipase 100.00::3-224 GO:0046503::glycerolipid catabolic process confident hh_1bu8_A_1::3-27,29-52,54-82,85-224 very confident psy7259 412 Q9BDJ4::Lipase member H ::Hydrolyzes specifically phosphatidic acid (PA) to produce lysophosphatidic acid (LPA).::Oryctolagus cuniculus (taxid: 9986) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 98.96::85-187 PF00151::Lipase 100.00::40-408 GO:0046503::glycerolipid catabolic process confident hh_1bu8_A_1::43-53,57-72,75-128,130-154,237-241,243-284,286-326,328-384,386-401 very confident psy4317 235 Q9Y5X9::Endothelial lipase ::Has phospholipase and triglyceride lipase activities. Hydrolyzes high density lipoproteins (HDL) more efficiently than other lipoproteins. Binds heparin.::Homo sapiens (taxid: 9606) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.24::54-168 PF00151::Lipase 100.00::12-233 GO:0046503::glycerolipid catabolic process confident hh_1bu8_A_1::10-97,99-152,155-213,215-233 very confident psy17377 106 Q5VXI9::Lipase member N ::Plays a highly specific role in the last step of keratinocyte differentiation. May have an essential function in lipid metabolism of the most differentiated epidermal layers.::Homo sapiens (taxid: 9606) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 98.39::14-78 PF00561::Abhydrolase_1 99.28::10-73 GO:0003824::catalytic activity confident hh_1k8q_A_1::5-78 very confident psy5051 87 Q5VYY2::Lipase member M ::Plays a highly specific role in the last step of keratinocyte differentiation. May have an essential function in lipid metabolism of the most differentiated epidermal layers.::Homo sapiens (taxid: 9606) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 98.81::5-61 PF00561::Abhydrolase_1 99.14::3-57 GO:0044281::small molecule metabolic process confident hh_1k8q_A_1::4-61 very confident psy17147 291 Q9UMR5::Lysosomal thioesterase PPT2 ::Removes thioester-linked fatty acyl groups from various substrates including S-palmitoyl-CoA. Has the highest S-thioesterase activity for the acyl groups palmitic and myristic acid followed by other short- and long-chain acyl substrates. However, because of structural constraints, is unable to remove palmitate from peptides or proteins.::Homo sapiens (taxid: 9606) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.87::5-107 PF02089::Palm_thioest 100.00::2-291 GO:0005615::extracellular space confident hh_1pja_A_1::3-128,133-141,155-167,172-205,207-209,211-291 very confident psy11077 97 P0CL94::Acyl-protein thioesterase 1 ::Hydrolyzes fatty acids from S-acylated cysteine residues in proteins with a strong preference for palmitoylated G-alpha proteins over other acyl substrates.::Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.53::8-91 PF02230::Abhydrolase_2 99.66::4-94 GO:0005829::cytosol confident hh_1fj2_A_1::6-93 very confident psy7212 75 Q5RBR7::Acyl-protein thioesterase 1 ::Hydrolyzes fatty acids from S-acylated cysteine residues in proteins such as trimeric G alpha proteins or HRAS. Has depalmitoylating activity and also low lysophospholipase activity.::Pongo abelii (taxid: 9601) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.23::8-68 PF02230::Abhydrolase_2 99.39::11-71 GO:0005829::cytosol confident rp_1fj2_A_1::21-75 very confident psy4395 283 Q8WMP9::Group XV phospholipase A2 ::Has transacylase and calcium-independent phospholipase A2 activity. Catalyzes the formation of 1-O-acyl-N-acetylsphingosine and the concomitant release of a lyso-phospholipid.::Bos taurus (taxid: 9913) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.62::87-184 PF02450::LCAT 99.94::47-199 GO:0044238::primary metabolic process confident hh_3fdn_A_1::219-282 confident psy17378 181 P80035::Gastric triacylglycerol lipase ::::Canis familiaris (taxid: 9615) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 95.96::47-115 PF04083::Abhydro_lipase 99.92::35-89 GO:0003824::catalytic activity confident hh_1k8q_A_1::30-95,99-104,106-148,151-154,156-166 very confident psy6856 370 O46107::Lipase 1 ::Could be a digestive enzyme.::Drosophila melanogaster (taxid: 7227) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.56::88-212 PF04083::Abhydro_lipase 99.48::76-131 GO:0043229::intracellular organelle confident hh_1k8q_A_1::67-134,136-216,218-225,228-234,238-280,282-369 very confident psy13664 139 O60095::Probable lipase C14C8.15 ::Probable lipase.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 97.49::68-138 PF04083::Abhydro_lipase 99.91::57-110 GO:0052689::carboxylic ester hydrolase activity confident hh_1k8q_A_1::48-122,124-136 very confident psy1220 337 Q5RBU7::Lysosomal Pro-X carboxypeptidase ::Cleaves C-terminal amino acids linked to proline in peptides such as angiotensin II, III and des-Arg9-bradykinin. This cleavage occurs at acidic pH, but enzymatic activity is retained with some substrates at neutral pH.::Pongo abelii (taxid: 9601) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.56::70-197 PF05577::Peptidase_S28 100.00::40-309 GO:0005615::extracellular space confident hh_3n2z_B_1::32-67,69-150,156-260,262-307 very confident psy10890 499 Q5RBU7::Lysosomal Pro-X carboxypeptidase ::Cleaves C-terminal amino acids linked to proline in peptides such as angiotensin II, III and des-Arg9-bradykinin. This cleavage occurs at acidic pH, but enzymatic activity is retained with some substrates at neutral pH.::Pongo abelii (taxid: 9601) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 98.47::56-166 PF05577::Peptidase_S28 100.00::1-432 GO:0005829::cytosol confident hh_3n2z_B_1::1-111,124-225,227-302,304-445 very confident psy3685 1042 Q96IR2::Zinc finger protein 845 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.11::766-888 PF05577::Peptidase_S28 100.00::737-1005 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2i13_A_2::410-477,503-613 very confident psy10118 409 Q29458::Gastric triacylglycerol lipase ::::Bos taurus (taxid: 9913) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.95::116-408 PF12697::Abhydrolase_6 99.87::144-398 GO:0003824::catalytic activity confident hh_1k8q_A_1::101-407 very confident psy4974 345 Q86WA6::Valacyclovir hydrolase ::Serine hydrolase that catalyzes the hydrolytic activation of amino acid ester prodrugs of nucleoside analogs such as valacyclovir and valganciclovir. Activates valacyclovir to acyclovir. May play a role in detoxification processes. It is a specific alpha-amino acid ester hydrolase that prefers small, hydrophobic, and aromatic side chains and does not have a stringent requirement for the leaving group other than preferring a primary alcohol.::Homo sapiens (taxid: 9606) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.94::74-345 PF12697::Abhydrolase_6 99.97::96-334 GO:0005739::mitochondrion confident hh_2ocg_A_1::72-131,145-155,157-247,250-340 very confident psy1324 115 Q6IE26::Epoxide hydrolase 4 ::::Mus musculus (taxid: 10090) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.77::1-97 PF12697::Abhydrolase_6 99.88::1-97 GO:0005794::Golgi apparatus confident hh_3afi_E_1::1-93 very confident psy17711 335 Q6QA69::1-acylglycerol-3-phosphate O-acyltransferase ABHD5 ::Lysophosphatidic acid acyltransferase which functions in phosphatidic acid biosynthesis. May regulate the cellular storage of triacylglycerol through activation of the phospholipase PNPLA2. Involved in keratinocyte differentiation.::Rattus norvegicus (taxid: 10116) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.76::1-240 PF12697::Abhydrolase_6 99.81::1-232 GO:0005829::cytosol confident hh_3ibt_A_1::1-9,14-69,71-73,84-95,99-104,109-117,125-128,131-134,136-148,151-175,178-205,209-238 confident psy16156 260 Q9EPB5::Serine hydrolase-like protein ::Probable serine hydrolase. May be related to cell muscle hypertrophy.::Mus musculus (taxid: 10090) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.87::2-95 PF12697::Abhydrolase_6 99.96::1-254 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_3qit_A_1::1-112,117-121,123-142,145-213,218-221,223-228,230-257 very confident psy3848 552 Q9CPP7::Gastric triacylglycerol lipase ::::Mus musculus (taxid: 10090) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.90::11-197 PF12697::Abhydrolase_6 99.88::44-195 GO:0043229::intracellular organelle confident hh_1k8q_A_1::2-59,87-209,212-242,244-315,375-414,417-449 very confident psy18021 230 P54069::Protein bem46 ::Suppressor of bem1/bud5.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG2267::PldB Lysophospholipase [Lipid metabolism] 99.89::5-205 PF12697::Abhydrolase_6 99.79::38-192 GO:0043231::intracellular membrane-bounded organelle confident hh_2qjw_A_1::35-90,93-93,96-110,133-134,138-170,174-179,181-203 confident psy1322 231 Q0IIS3::Epoxide hydrolase 3 ::::Xenopus tropicalis (taxid: 8364) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.74::72-183 PF12697::Abhydrolase_6 99.79::90-184 GO:0044255::cellular lipid metabolic process confident hh_3kxp_A_1::72-84,87-183 very confident psy5149 250 P34163::Sterol esterase TGL1 ::Mediates the hydrolysis of steryl esters. Required for mobilization of steryl ester, thereby playing a central role in lipid metabolism. May have weak lipase activity toward triglycerides upon some conditions, however, the relevance of such activity is unclear in vivo.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2267::PldB Lysophospholipase [Lipid metabolism] 99.74::60-205 PF12697::Abhydrolase_6 99.65::86-199 GO:0052689::carboxylic ester hydrolase activity confident hh_1k8q_A_1::41-199 very confident psy6112 374 O61491::Flotillin-1 ::May act as a scaffolding protein within caveolar membranes, functionally participating in formation of caveolae or caveolae-like vesicles.::Drosophila melanogaster (taxid: 7227) very confident COG2268::Uncharacterized protein conserved in bacteria [Function unknown] 100.00::1-374 PF01145::Band_7 99.90::7-195 GO:0034451::centriolar satellite confident hh_1win_A_1::43-69,74-185 very confident psy6111 133 O61491::Flotillin-1 ::May act as a scaffolding protein within caveolar membranes, functionally participating in formation of caveolae or caveolae-like vesicles.::Drosophila melanogaster (taxid: 7227) confident COG2268::Uncharacterized protein conserved in bacteria [Function unknown] 99.73::1-127 PF01145::Band_7 98.59::2-68 GO:0034451::centriolar satellite confident hh_1win_A_1::1-58 very confident psy1054 467 Q98TZ8::Flotillin-2a ::May play a role in axon growth and regeneration. May be involved in epidermal cell adhesion and epidermal structure and function.::Danio rerio (taxid: 7955) confident COG2268::Uncharacterized protein conserved in bacteria [Function unknown] 100.00::1-466 PF01145::Band_7 99.81::1-143 GO:0044464::cell part confident hh_1win_A_1::33-156 very confident psy16105 130 Q6PEM8::Proton-coupled folate transporter ::Has been shown to act both as an intestinal proton-coupled high-affinity folate transporter and as an intestinal heme transporter which mediates heme uptake from the gut lumen into duodenal epithelial cells. The iron is then released from heme and may be transported into the bloodstream. Dietary heme iron is an important nutritional source of iron. Shows a higher affinity for folate than heme.::Mus musculus (taxid: 10090) portable COG2270::Permeases of the major facilitator superfamily [General function prediction only] 97.57::16-109 PF11700::ATG22 98.38::46-127 GO:0044464::cell part confident hh_4aps_A_1::12-102,106-127 portable psy3209 567 P30605::Myo-inositol transporter 1 ::Major transporter for myo-inositol.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::112-537 PF00083::Sugar_tr 100.00::122-549 GO:0005794::Golgi apparatus confident hh_2gfp_A_1::120-146,152-299,303-304,337-358,364-420,423-465,467-478,480-519 very confident psy17080 565 Q5R5H7::Solute carrier family 22 member 2 ::Mediates tubular uptake of organic compounds from circulation. Mediates the influx of agmatine, dopamine, noradrenaline (norepinephrine), serotonin, choline, famotidine, ranitidine, histamin, creatinine, amantadine, memantine, acriflavine, 4-[4-(dimethylamino)-styryl]-N-methylpyridinium ASP, amiloride, metformin, N-1-methylnicotinamide (NMN), tetraethylammonium (TEA), 1-methyl-4-phenylpyridinium (MPP), cimetidine, cisplatin and oxaliplatin. Cisplatin may develop a nephrotoxic action. Transport of creatinine is inhibited by fluoroquinolones such as DX-619 and LVFX. This transporter is a major determinant of the anticancer activity of oxaliplatin and may contribute to antitumor specificity.::Pongo abelii (taxid: 9601) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::140-523 PF00083::Sugar_tr 100.00::153-540 GO:0005887::integral to plasma membrane confident hh_1pw4_A_1::153-306,321-326,328-328,332-434,436-526 very confident psy1726 137 Q8N4V2::Synaptic vesicle 2-related protein ::::Homo sapiens (taxid: 9606) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 90.61::50-134 PF00083::Sugar_tr 95.55::29-136 GO:0008021::synaptic vesicle confident hh_4aps_A_1::46-77,86-87,92-92,102-135 portable psy4866 537 P17809::Solute carrier family 2, facilitated glucose transporter member 1 ::Facilitative glucose transporter. This isoform may be responsible for constitutive or basal glucose uptake. Has a very broad substrate specificity; can transport a wide range of aldoses including both pentoses and hexoses.::Mus musculus (taxid: 10090) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::62-489 PF00083::Sugar_tr 100.00::70-502 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::61-94,98-269,272-294,298-389,398-508 very confident psy16653 301 P58351::Solute carrier family 2, facilitated glucose transporter member 2 ::Facilitative glucose transporter. This isoform likely mediates the bidirectional transfer of glucose across the plasma membrane of hepatocytes and is responsible for uptake of glucose by the beta cells; may comprise part of the glucose-sensing mechanism of the beta cell. May also participate with the Na(+)/glucose cotransporter in the transcellular transport of glucose in the small intestine and kidney.::Bos taurus (taxid: 9913) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.89::3-283 PF00083::Sugar_tr 100.00::4-297 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::4-106,108-140,142-154,156-165,170-300 very confident psy11545 337 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.83::11-291 PF00083::Sugar_tr 99.96::12-306 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::12-71,73-73,77-84,87-93,98-188,200-312 very confident psy17630 372 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.76::16-323 PF00083::Sugar_tr 99.93::3-337 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::16-23,28-77,79-85,87-97,102-194,203-259,291-343 confident psy66 164 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 97.92::4-71 PF00083::Sugar_tr 99.74::2-140 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::3-92 confident psy15227 515 Q9UGQ3::Solute carrier family 2, facilitated glucose transporter member 6 ::Facilitative glucose transporter; binds cytochalasin B with low affinity.::Homo sapiens (taxid: 9606) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::8-436 PF00083::Sugar_tr 100.00::17-450 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::7-220,222-235,237-245,250-341,346-452 very confident psy17628 338 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.86::16-292 PF00083::Sugar_tr 99.95::2-306 GO:0015771::trehalose transport confident hh_4gc0_A_1::16-23,28-77,79-85,87-96,101-194,203-312 very confident psy7965 257 Q93YP9::Sugar transporter ERD6-like 4 ::Sugar transporter.::Arabidopsis thaliana (taxid: 3702) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.84::2-215 PF00083::Sugar_tr 99.94::1-257 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_4gc0_A_1::1-134,136-141,143-154,159-257 confident psy6665 420 P96710::Arabinose-proton symporter ::Uptake of arabinose across the boundary membrane with the concomitant transport of protons into the cell (symport system).::Bacillus subtilis (strain 168) (taxid: 224308) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::2-372 PF00083::Sugar_tr 100.00::7-385 GO:0031982::vesicle confident hh_4gc0_A_1::8-63,76-83,85-179,183-187,190-197,201-347,349-390 very confident psy2968 173 Q9WTN6::Solute carrier family 22 member 21 ::Sodium-ion independent, medium affinity carnitine transporter. Also transports organic cations such as tetraethylammonium (TEA) without the involvement of sodium. Relative uptake activity ratio of carnitine to TEA is 746.::Mus musculus (taxid: 10090) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 97.08::3-50 PF00083::Sugar_tr 99.51::2-150 GO:0042221::response to chemical stimulus confident hh_4gc0_A_1::3-75,79-142 confident psy15864 553 Q07647::Solute carrier family 2, facilitated glucose transporter member 3 ::Facilitative glucose transporter. Probably a neuronal glucose transporter.::Rattus norvegicus (taxid: 10116) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.88::103-420 PF00083::Sugar_tr 99.95::83-435 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy3807 483 P14672::Solute carrier family 2, facilitated glucose transporter member 4 ::Insulin-regulated facilitative glucose transporter.::Homo sapiens (taxid: 9606) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.83::160-481 PF00083::Sugar_tr 99.90::181-481 GO:0055056::D-glucose transmembrane transporter activity confident hh_4gc0_A_1::107-125,147-163,168-169,172-297,300-305,310-402,414-479 confident psy12242 498 P17809::Solute carrier family 2, facilitated glucose transporter member 1 ::Facilitative glucose transporter. This isoform may be responsible for constitutive or basal glucose uptake. Has a very broad substrate specificity; can transport a wide range of aldoses including both pentoses and hexoses.::Mus musculus (taxid: 10090) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::24-477 PF00083::Sugar_tr 100.00::35-492 GO:0055056::D-glucose transmembrane transporter activity very confident hh_4gc0_A_1::26-39,41-67,80-238,240-279,282-288,293-385,389-497 very confident psy15226 362 P93051::Sugar transporter ERD6-like 7 ::Sugar transporter.::Arabidopsis thaliana (taxid: 3702) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.85::9-283 PF00083::Sugar_tr 99.95::15-297 GO:0071385::cellular response to glucocorticoid stimulus confident hh_4gc0_A_1::14-65,67-83,85-93,98-187,192-299,301-304 confident psy13410 493 Q9U539::Organic cation transporter 1 ::Transports organic cations such as tetraethylammonium (TEA). Displays a broad substrate specificity.::Caenorhabditis elegans (taxid: 6239) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.91::33-489 PF00083::Sugar_tr 99.91::66-234 GO:0071702::organic substance transport confident hh_1pw4_A_1::56-60,62-62,66-161,170-211,214-221,240-247,253-254,256-258,260-273,276-278,284-286,291-307,310-316,381-382,392-397,401-489 confident psy11785 308 Q8R3L5::Solute carrier organic anion transporter family member 3A1 ::Mediates the Na(+)-independent transport of organic anions (By similarity). Mediates transport of prostaglandins (PG) E1 and E2, thyroxine (T4), deltorphin II, BQ-123 and vasopressin.::Mus musculus (taxid: 10090) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.60::5-210 PF03137::OATP 100.00::1-264 GO:0044425::membrane part confident hh_2erw_A_1::254-257,260-263,265-291 confident psy10696 174 Q9JJL3::Solute carrier organic anion transporter family member 1B2 ::Mediates the Na(+)-independent uptake of organic anions such as taurochlate, bromosulfophthalein and steroid conjugates such as estrone-3-sulfate, 17-beta-glucuronosyl estradiol, dehydroepiandrosterone sulfate and prostaglandin E2.::Mus musculus (taxid: 10090) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 95.71::33-169 PF03137::OATP 99.96::4-163 GO:0071705::nitrogen compound transport confident hh_4aps_A_1::5-91,111-111,113-116,121-156,158-173 portable psy5252 285 B0JZE1::Protein spinster homolog 2 ::Sphingolipid transporter required for migration of myocardial precursors. Transports sphingosine 1-phosphate (S1P), a secreted lipid mediator that plays critical roles in cardiovascular, immunological, and neural development and function. Mediates the export of S1P from cells in the extraembryonic yolk syncytial layer (YSL), thereby regulating myocardial precursor migration.::Xenopus tropicalis (taxid: 8364) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.91::1-260 PF05977::MFS_3 99.58::2-256 GO:0001569::patterning of blood vessels confident hh_4aps_A_1::1-56,58-81 confident psy14136 534 Q9JI12::Vesicular glutamate transporter 2 ::Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas. May also mediate the transport of inorganic phosphate.::Rattus norvegicus (taxid: 10116) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::9-480 PF07690::MFS_1 100.00::95-439 GO:0005315::inorganic phosphate transmembrane transporter activity confident hh_1pw4_A_1::13-43,95-98,100-356,367-448,454-479 very confident psy11630 169 Q8TED4::Sugar phosphate exchanger 2 ::::Homo sapiens (taxid: 9606) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.77::5-127 PF07690::MFS_1 97.50::2-127 GO:0005774::vacuolar membrane confident hh_1pw4_A_2::2-10,15-57,59-68,76-91,109-127 confident psy15069 461 Q7RTX9::Monocarboxylate transporter 14 ::Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates.::Homo sapiens (taxid: 9606) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::4-449 PF07690::MFS_1 100.00::7-408 GO:0005886::plasma membrane confident hh_1pw4_A_1::5-18,20-82,84-177,179-182,199-199,221-222,232-236,247-334,337-419,421-447 very confident psy12271 95 Q8BGC3::Monocarboxylate transporter 12 ::Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates.::Mus musculus (taxid: 10090) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.31::3-80 PF07690::MFS_1 98.94::5-72 GO:0008028::monocarboxylic acid transmembrane transporter activity confident no hit no match psy10147 179 Q8BN82::Sialin ::Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.::Mus musculus (taxid: 10090) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.73::35-178 PF07690::MFS_1 99.28::35-178 GO:0009536::plastid confident hh_1pw4_A_1::35-107,116-178 confident psy11734 817 Q9FKV1::Probable anion transporter 5 ::Inorganic phosphate and probable anion transporter.::Arabidopsis thaliana (taxid: 3702) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.96::443-793 PF07690::MFS_1 99.86::209-755 GO:0015291::secondary active transmembrane transporter activity confident hh_1pw4_A_2::1-56,58-103,106-115,189-271,282-365,411-436 confident psy4738 1188 Q8BN82::Sialin ::Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.::Mus musculus (taxid: 10090) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::6-427 PF07690::MFS_1 99.96::16-390 GO:0015319::sodium:inorganic phosphate symporter activity confident hh_1pw4_A_1::8-38,67-69,71-124,127-191,194-304,314-401,404-426 very confident psy10491 520 Q9V7S5::Putative inorganic phosphate cotransporter ::May be an inorganic phosphate cotransporter.::Drosophila melanogaster (taxid: 7227) very confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::25-459 PF07690::MFS_1 100.00::38-416 GO:0015739::sialic acid transport confident hh_1pw4_A_1::28-59,68-70,72-126,129-191,195-333,344-424,431-457 very confident psy8365 381 Q1JQC1::Major facilitator superfamily domain-containing protein 1 ::::Bos taurus (taxid: 9913) very confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::27-381 PF07690::MFS_1 100.00::40-380 GO:0016021::integral to membrane confident hh_1pw4_A_1::29-64,66-95,97-189,196-199,202-221,224-250,252-380 very confident psy3467 455 Q9V7S5::Putative inorganic phosphate cotransporter ::May be an inorganic phosphate cotransporter.::Drosophila melanogaster (taxid: 7227) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.97::15-286 PF07690::MFS_1 99.94::9-286 GO:0030672::synaptic vesicle membrane confident hh_2gfp_A_1::7-148,152-186,206-285 confident psy3312 189 Q652N5::Probable anion transporter 4, chloroplastic ::Probable anion transporter.::Oryza sativa subsp. japonica (taxid: 39947) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.79::19-187 PF07690::MFS_1 99.66::32-187 GO:0031090::organelle membrane confident hh_1pw4_A_1::21-52,80-82,84-139,143-187 confident psy4758 318 Q8BN82::Sialin ::Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.::Mus musculus (taxid: 10090) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 100.00::1-300 PF07690::MFS_1 99.90::2-259 GO:0031090::organelle membrane confident hh_1pw4_A_1::2-38,40-176,187-221,223-268,273-299 confident psy4740 147 Q9NRA2::Sialin ::Primary solute translocator for anionic substances; particularly it is a free sialic acid transporter in the lysosomes.::Homo sapiens (taxid: 9606) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.82::2-136 PF07690::MFS_1 99.82::2-131 GO:0031090::organelle membrane confident hh_2gfp_A_1::2-35,38-102,105-134 confident psy3469 154 Q9V7S5::Putative inorganic phosphate cotransporter ::May be an inorganic phosphate cotransporter.::Drosophila melanogaster (taxid: 7227) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.38::2-133 PF07690::MFS_1 98.82::4-112 GO:0031090::organelle membrane confident hh_1pw4_A_1::4-19,21-83,88-117 confident psy13668 513 Q652N5::Probable anion transporter 4, chloroplastic ::Probable anion transporter.::Oryza sativa subsp. japonica (taxid: 39947) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.88::22-225 PF07690::MFS_1 99.70::22-303 GO:0046943::carboxylic acid transmembrane transporter activity confident hh_1pw4_A_1::22-47,49-93,95-128,136-312 confident psy15816 171 A4FV52::Vesicular glutamate transporter 1 ::Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also mediate the transport of inorganic phosphate.::Bos taurus (taxid: 9913) portable COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 98.39::22-151 PF07690::MFS_1 98.14::18-138 GO:0071705::nitrogen compound transport confident hh_4aps_A_1::18-43,45-109,116-141 portable psy15142 744 Q05B21::Vesicular glutamate transporter 1 ::Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.::Xenopus tropicalis (taxid: 8364) confident COG2271::UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] 99.97::291-648 PF07690::MFS_1 99.91::317-580 GO:0072686::mitotic spindle confident hh_1pw4_A_2::128-154,165-372,375-467 confident psy12957 274 P21837::Crystal protein ::::Dictyostelium discoideum (taxid: 44689) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::1-252 PF00135::COesterase 100.00::1-254 GO:0001941::postsynaptic membrane organization confident hh_1p0i_A_1::1-41,55-117,132-212,218-248 very confident psy3087 192 Q62765::Neuroligin-1 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures (By similarity). May be involved in specification of excitatory synapses.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.85::55-152 PF00135::COesterase 99.83::55-152 GO:0001941::postsynaptic membrane organization confident hh_1p0i_A_1::80-108,117-159 very confident psy4292 155 Q62765::Neuroligin-1 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures (By similarity). May be involved in specification of excitatory synapses.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.61::24-152 PF00135::COesterase 99.74::5-149 GO:0001941::postsynaptic membrane organization confident hh_1p0i_A_1::5-18,20-52,77-117,123-152 very confident psy14924 209 Q62765::Neuroligin-1 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures (By similarity). May be involved in specification of excitatory synapses.::Rattus norvegicus (taxid: 10116) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.92::50-189 PF00135::COesterase 99.90::50-189 GO:0001941::postsynaptic membrane organization confident hh_2ogt_A_1::50-167,174-188 very confident psy13950 110 Q62889::Neuroligin-3 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.66::1-105 PF00135::COesterase 99.86::1-105 GO:0001941::postsynaptic membrane organization confident hh_1ea5_A_1::1-105 very confident psy7699 150 Q62889::Neuroligin-3 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.94::32-148 PF00135::COesterase 99.96::29-149 GO:0001941::postsynaptic membrane organization confident hh_1llf_A_1::33-47,54-107,114-147 very confident psy6011 388 Q62889::Neuroligin-3 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::4-274 PF00135::COesterase 100.00::10-380 GO:0001941::postsynaptic membrane organization confident hh_1p0i_A_1::10-251,254-305,314-321,323-365 very confident psy3368 169 Q62889::Neuroligin-3 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.93::27-140 PF00135::COesterase 99.95::21-146 GO:0001941::postsynaptic membrane organization confident hh_1qe3_A_1::27-42,51-102,120-141 very confident psy7145 191 Q69ZK9::Neuroligin-2 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures.::Mus musculus (taxid: 10090) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.91::21-129 PF00135::COesterase 99.95::1-135 GO:0001941::postsynaptic membrane organization confident hh_1llf_A_1::21-35,38-98,103-105,107-131 very confident psy6008 123 Q8NFZ3::Neuroligin-4, Y-linked ::Putative neuronal cell surface protein involved in cell-cell-interactions.::Homo sapiens (taxid: 9606) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.94::8-119 PF00135::COesterase 99.94::6-122 GO:0001941::postsynaptic membrane organization confident hh_1llf_A_1::8-17,19-24,28-82,88-120 very confident psy9097 152 no hit no match COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.93::24-142 PF00135::COesterase 99.94::20-147 GO:0001941::postsynaptic membrane organization confident no hit no match psy600 494 Q6AW47::Carboxylesterase 5A ::Involved in the detoxification of xenobiotics and in the activation of ester and amide prodrugs.::Canis familiaris (taxid: 9615) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::2-478 PF00135::COesterase 100.00::1-475 GO:0004091::carboxylesterase activity confident hh_1llf_A_1::1-187,189-207,210-246,252-285,287-292,294-304,311-311,317-365,367-381,392-410,421-457,459-482 very confident psy2603 178 Q47M62::Carboxylesterase ::::Thermobifida fusca (strain YX) (taxid: 269800) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::22-176 PF00135::COesterase 99.98::24-178 GO:0005576::extracellular region confident hh_1llf_A_1::22-46,50-52,59-62,66-70,73-104,106-176 very confident psy13951 130 Q69ZK9::Neuroligin-2 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures.::Mus musculus (taxid: 10090) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.95::16-129 PF00135::COesterase 99.95::11-129 GO:0005794::Golgi apparatus confident hh_2ogt_A_1::16-129 very confident psy1491 391 Q62889::Neuroligin-3 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::3-380 PF00135::COesterase 100.00::3-380 GO:0005887::integral to plasma membrane confident hh_1llf_A_1::3-12,14-72,75-81,100-100,107-133,138-277,279-284,287-311,316-317,321-334,343-357,359-376 very confident psy13956 83 Q62889::Neuroligin-3 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. May play a role in formation or maintenance of synaptic junctions. May also play a role in glia-glia or glia-neuron interactions in the developing peripheral nervous system.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.51::8-83 PF00135::COesterase 99.67::3-83 GO:0005887::integral to plasma membrane confident hh_1ea5_A_1::2-22,27-52,58-83 very confident psy4013 69 Q69ZK9::Neuroligin-2 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures.::Mus musculus (taxid: 10090) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.71::3-67 PF00135::COesterase 99.82::5-66 GO:0005887::integral to plasma membrane confident hh_1p0i_A_1::3-67 very confident psy6 66 Q69ZK9::Neuroligin-2 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures.::Mus musculus (taxid: 10090) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 98.93::12-66 PF00135::COesterase 99.18::12-66 GO:0005887::integral to plasma membrane confident hh_1ea5_A_1::14-35,41-66 very confident psy7 79 Q69ZK9::Neuroligin-2 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures.::Mus musculus (taxid: 10090) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.19::7-79 PF00135::COesterase 99.30::7-79 GO:0005887::integral to plasma membrane confident hh_1ea5_A_1::8-21,23-48,54-79 very confident psy2605 53 Q62765::Neuroligin-1 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures (By similarity). May be involved in specification of excitatory synapses.::Rattus norvegicus (taxid: 10116) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.65::1-49 PF00135::COesterase 99.61::1-49 GO:0007157::heterophilic cell-cell adhesion confident hh_1qe3_A_1::1-48 very confident psy13955 74 Q62765::Neuroligin-1 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures (By similarity). May be involved in specification of excitatory synapses.::Rattus norvegicus (taxid: 10116) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.55::2-74 PF00135::COesterase 99.60::10-74 GO:0016044::cellular membrane organization confident hh_1ea5_A_1::2-43,49-74 very confident psy4014 85 Q62765::Neuroligin-1 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures (By similarity). May be involved in specification of excitatory synapses.::Rattus norvegicus (taxid: 10116) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.78::3-72 PF00135::COesterase 99.78::3-71 GO:0030425::dendrite confident hh_2ogt_A_1::3-11,13-69 very confident psy3086 90 Q62765::Neuroligin-1 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures (By similarity). May be involved in specification of excitatory synapses.::Rattus norvegicus (taxid: 10116) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.93::3-89 PF00135::COesterase 99.94::4-89 GO:0031594::neuromuscular junction confident hh_1qe3_A_1::4-19,25-89 very confident psy15829 193 P07140::Acetylcholinesterase ::Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine.::Drosophila melanogaster (taxid: 7227) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.79::1-191 PF00135::COesterase 99.92::1-191 GO:0042426::choline catabolic process confident hh_1dx4_A_1::1-34,36-92,95-192 very confident psy12441 916 O00748::Cocaine esterase ::Involved in the detoxification of xenobiotics and in the activation of ester and amide prodrugs. Shows high catalytic efficiency for hydrolysis of cocaine, 4-methylumbelliferyl acetate, heroin and 6-monoacetylmorphine.::Homo sapiens (taxid: 9606) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::540-916 PF00135::COesterase 100.00::540-916 GO:0044281::small molecule metabolic process confident hh_1llf_A_1::540-562,564-719,722-758,763-799,801-809,814-823,831-879,882-882,884-898,909-916 very confident psy9478 71 P37967::Para-nitrobenzyl esterase ::Catalyzes hydrolysis of several beta-lactam antibiotic PNB esters to the corresponding free acid and PNB alcohol.::Bacillus subtilis (strain 168) (taxid: 224308) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.76::4-69 PF00135::COesterase 99.76::4-69 GO:0044708::single-organism behavior confident hh_1p0i_A_1::15-65 very confident psy15632 339 P37967::Para-nitrobenzyl esterase ::Catalyzes hydrolysis of several beta-lactam antibiotic PNB esters to the corresponding free acid and PNB alcohol.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::105-329 PF00135::COesterase 100.00::101-327 GO:0044710::single-organism metabolic process confident hh_1llf_A_1::105-111,113-120,127-150,152-196,201-203,207-327 very confident psy12886 326 Q69ZK9::Neuroligin-2 ::Neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins. Seems to play role in formation or maintenance of synaptic junctions. In vitro, triggers the de novo formation of presynaptic structures.::Mus musculus (taxid: 10090) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::16-308 PF00135::COesterase 100.00::8-308 GO:0048699::generation of neurons confident hh_1llf_A_1::8-171,180-192,195-214,217-224,226-252,271-287,289-305 very confident psy17624 201 P07140::Acetylcholinesterase ::Rapidly hydrolyzes choline released into the synapse. It can hydrolyze butyrylthiocholine.::Drosophila melanogaster (taxid: 7227) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.86::27-190 PF00135::COesterase 99.91::22-189 GO:0050896::response to stimulus confident rp_1dx4_A_1::1-38,40-54,56-196 very confident psy10960 341 P14943::Liver carboxylesterase 2 ::Involved in the detoxification of xenobiotics and in the activation of ester and amide prodrugs.::Oryctolagus cuniculus (taxid: 9986) portable COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 100.00::139-341 PF00135::COesterase 100.00::137-341 GO:0050896::response to stimulus confident hh_1p0i_A_1::139-157,159-159,161-231,233-340 very confident psy161 148 P06276::Cholinesterase ::Esterase with broad substrate specificity. Contributes to the inactivation of the neurotransmitter acetylcholine. Can degrade neurotoxic organophosphate esters.::Homo sapiens (taxid: 9606) confident COG2272::PnbA Carboxylesterase type B [Lipid metabolism] 99.66::69-148 PF00135::COesterase 99.73::69-148 GO:0051384::response to glucocorticoid stimulus confident hh_1llf_A_1::69-148 very confident psy1371 244 Q54DY9::Probable mitochondrial chaperone BCS1-B ::Chaperone necessary for the assembly of mitochondrial respiratory chain complex III.::Dictyostelium discoideum (taxid: 44689) confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 99.87::13-226 PF00004::AAA 99.21::157-241 GO:0034551::mitochondrial respiratory chain complex III assembly confident hh_1iy2_A_1::115-131,133-181,184-242 very confident psy3001 602 Q54U44::ABC transporter C family member 12 ::::Dictyostelium discoideum (taxid: 44689) portable COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::3-447 PF00005::ABC_tran 99.92::201-378 GO:0005774::vacuolar membrane confident hh_3nh6_A_1::158-187,190-211,213-268,280-283,297-300,307-349,352-437,439-447 very confident psy11400 298 P28288::ATP-binding cassette sub-family D member 3 ::Probable transporter. The nucleotide-binding fold acts as an ATP-binding subunit with ATPase activity.::Homo sapiens (taxid: 9606) confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::4-298 PF00005::ABC_tran 99.90::105-263 GO:0006635::fatty acid beta-oxidation confident hh_2olj_A_1::80-92,94-95,104-121,130-138,146-146,151-196,198-222,232-295 very confident psy12535 209 Q9M1C7::ABC transporter C family member 9 ::Pump for glutathione S-conjugates.::Arabidopsis thaliana (taxid: 3702) portable COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 99.97::9-180 PF00005::ABC_tran 99.16::37-76 GO:0031090::organelle membrane confident rp_2cbz_A_1::18-91,115-119,128-188 very confident psy1503 265 Q9P5N0::ATP-binding cassette transporter abc3 ::Iron-regulated vacuolar ABC-type transporter which may be responsible for mobilizing stored iron from the vacuole to the cytosol in response to iron deficiency.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::62-257 PF00005::ABC_tran 100.00::107-242 GO:0032502::developmental process confident hh_2cbz_A_1::88-101,103-256 very confident psy1502 597 O15439::Multidrug resistance-associated protein 4 ::May be an organic anion pump relevant to cellular detoxification.::Homo sapiens (taxid: 9606) confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::14-565 PF00005::ABC_tran 100.00::357-503 GO:0042221::response to chemical stimulus confident hh_2olj_A_1::340-351,353-448,454-460,462-552 very confident psy845 677 P32386::ATP-dependent bile acid permease ::Exhibits ATP-dependent bile acid transport.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::161-677 PF00005::ABC_tran 99.95::454-654 GO:0042221::response to chemical stimulus confident hh_2ff7_A_1::434-505,564-677 very confident psy13349 604 Q57180::Uncharacterized ABC transporter ATP-binding protein HI_1051 ::::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) very confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::8-600 PF00005::ABC_tran 100.00::376-530 GO:0042221::response to chemical stimulus confident hh_2ff7_A_1::358-484,490-600 very confident psy5743 644 Q9JI39::ATP-binding cassette sub-family B member 10, mitochondrial ::May mediate critical mitochondrial transport functions related to heme biosynthesis.::Mus musculus (taxid: 10090) very confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::25-641 PF00005::ABC_tran 100.00::418-570 GO:0042803::protein homodimerization activity confident hh_2ff7_A_1::398-411,413-502,506-642 very confident psy4347 816 O75027::ATP-binding cassette sub-family B member 7, mitochondrial ::Could be involved in the transport of heme from the mitochondria to the cytosol. Plays a central role in the maturation of cytosolic iron-sulfur (Fe/S) cluster-containing proteins.::Homo sapiens (taxid: 9606) confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::88-706 PF00005::ABC_tran 99.98::500-649 GO:0044425::membrane part confident hh_2ff7_A_1::480-493,495-701 very confident psy6082 275 Q4HVU7::Iron-sulfur clusters transporter ATM1, mitochondrial ::Performs an essential function in the generation of cytoplasmic iron-sulfur proteins by mediating export of Fe/S cluster precursors from the mitochondrion.::Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533) confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 99.95::22-271 PF00664::ABC_membrane 99.97::34-273 GO:0005739::mitochondrion confident hh_3g5u_A_2::29-123,137-264 confident psy10468 365 Q56A55::ATP-binding cassette sub-family B member 8, mitochondrial ::::Danio rerio (taxid: 7955) confident COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 99.88::2-360 PF00664::ABC_membrane 99.93::2-360 GO:0005774::vacuolar membrane confident hh_3g5u_A_1::3-98,222-358 very confident psy12536 205 Q54P13::ABC transporter C family member 8 ::::Dictyostelium discoideum (taxid: 44689) portable COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 99.96::4-205 PF00664::ABC_membrane 99.83::8-167 GO:0005886::plasma membrane confident hh_2yl4_A_1::8-152 confident psy1504 153 Q42093::ABC transporter C family member 2 ::Pump for glutathione S-conjugates. Mediates the transport of S-conjugates such as GSH, S-(2,4-dinitrophenyl)-glutathione (DNP-GS), GSSG, cyanidin 3-glucoside-GS (C3G-GS) and metolachlor-GS (MOC-GS), glucuronides such as 17-beta-estradiol 17-(beta-D-glucuronide) (E(2)17betaG), and of the chlorophyll catabolite such as B.napus nonfluorescent chlorophyll catabolite (Bn-NCC-1).::Arabidopsis thaliana (taxid: 3702) portable COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 99.43::3-138 PF00664::ABC_membrane 99.70::3-151 GO:0016020::membrane confident hh_4f4c_A_2::29-145 confident psy16196 950 O15438::Canalicular multispecific organic anion transporter 2 ::May act as an inducible transporter in the biliary and intestinal excretion of organic anions. Acts as an alternative route for the export of bile acids and glucuronides from cholestatic hepatocytes.::Homo sapiens (taxid: 9606) portable COG2274::SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] 100.00::230-804 PF00664::ABC_membrane 99.83::246-515 GO:0042221::response to chemical stimulus confident hh_2cbz_A_1::664-676,684-804 very confident psy10663 572 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::1-552 PF00732::GMC_oxred_N 100.00::1-295 GO:0005615::extracellular space confident hh_2jbv_A_1::1-35,37-52,57-57,59-122,127-128,131-145,147-149,151-169,171-223,225-297,299-307,309-311,325-325,330-330,332-362,368-369,373-376,385-385,387-458,462-464,468-558,560-568 very confident psy3408 146 A6VEI3::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas aeruginosa (strain PA7) (taxid: 381754) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.83::26-133 PF00732::GMC_oxred_N 99.86::30-134 GO:0005622::intracellular confident rp_3t37_A_1::20-93,98-114 very confident psy11618 1381 B7GYG5::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Acinetobacter baumannii (strain AB307-0294) (taxid: 557600) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::159-782 PF00732::GMC_oxred_N 100.00::163-464 GO:0005622::intracellular confident hh_2jbv_A_1::160-227,233-295,298-316,319-337,339-373,375-467,469-478,497-499,563-563,570-598,600-600,602-603,607-607,609-612,623-624,626-697,701-703,707-782 very confident psy1205 868 P18172::Glucose dehydrogenase [acceptor] ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::138-858 PF00732::GMC_oxred_N 100.00::386-605 GO:0005622::intracellular confident hh_2jbv_A_1::387-440,442-534,536-619,636-637,640-652,656-675,677-682,688-688,693-764,766-768,774-861 very confident psy4112 284 Q3BXK8::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Xanthomonas campestris pv. vesicatoria (strain 85-10) (taxid: 316273) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::51-284 PF00732::GMC_oxred_N 100.00::55-283 GO:0005622::intracellular confident hh_2jbv_A_1::53-118,125-125,127-187,189-207,231-283 very confident psy17300 152 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.87::1-143 PF00732::GMC_oxred_N 99.95::1-104 GO:0005622::intracellular confident hh_3fim_B_1::1-106,108-143,145-151 very confident psy760 511 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::65-465 PF00732::GMC_oxred_N 100.00::70-366 GO:0005622::intracellular confident hh_2jbv_A_1::68-133,139-139,141-203,205-297,299-368,370-378 very confident psy7389 731 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::113-726 PF00732::GMC_oxred_N 100.00::118-414 GO:0005622::intracellular confident hh_2jbv_A_1::116-182,188-248,250-250,253-304,307-318,320-339,341-341,347-415,417-426,428-429,441-441,445-445,452-466,469-489,492-493,496-496,500-500,502-529,531-553,559-563,582-583,589-596,609-613,624-628,643-730 very confident psy754 610 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::39-605 PF00732::GMC_oxred_N 100.00::44-341 GO:0005622::intracellular confident hh_2jbv_A_1::42-107,113-113,115-176,178-269,272-342,344-354,359-359,365-366,381-394,398-416,421-423,425-427,438-438,440-511,515-518,522-607 very confident psy6708 197 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.96::39-193 PF00732::GMC_oxred_N 99.97::43-193 GO:0005622::intracellular confident hh_3fim_B_1::42-107,112-194 very confident psy2463 177 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::3-175 PF00732::GMC_oxred_N 100.00::7-174 GO:0005622::intracellular confident hh_3q9t_A_1::4-66,75-174 very confident psy10417 385 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::19-368 PF00732::GMC_oxred_N 100.00::24-356 GO:0005622::intracellular confident hh_2jbv_A_1::22-88,94-155,193-285,287-357,359-367 very confident psy4102 1049 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::88-402 PF00732::GMC_oxred_N 100.00::91-391 GO:0005622::intracellular confident hh_2jbv_A_1::89-153,161-162,164-225,227-319,323-394,396-401 very confident psy8892 1183 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::654-1178 PF00732::GMC_oxred_N 100.00::658-952 GO:0005622::intracellular confident hh_2jbv_A_1::656-722,728-790,792-883,885-954,956-966,971-972,985-985,990-990,993-1007,1010-1027,1033-1037,1048-1048,1050-1068,1076-1127,1131-1135,1139-1179 very confident psy17311 310 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::53-308 PF00732::GMC_oxred_N 100.00::57-308 GO:0005622::intracellular confident hh_2jbv_A_1::55-120,125-125,127-188,190-195,197-268,271-308 very confident psy8943 134 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.61::2-93 PF00732::GMC_oxred_N 99.78::6-94 GO:0005622::intracellular confident hh_2jbv_A_1::2-44,48-92 very confident psy1043 1306 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::76-645 PF00732::GMC_oxred_N 100.00::80-375 GO:0005622::intracellular confident hh_2jbv_A_1::78-144,150-211,213-306,308-378,380-392,397-397,441-471,473-478,480-550,554-557,561-648 very confident psy1042 567 B7GYG5::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Acinetobacter baumannii (strain AB307-0294) (taxid: 557600) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::114-567 PF00732::GMC_oxred_N 100.00::118-421 GO:0005829::cytosol confident hh_2jbv_A_1::116-182,188-249,253-326,328-347,349-349,355-423,425-436,449-449,453-453,458-458,461-475,478-497,499-501,508-508,510-538,540-567 very confident psy4106 209 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::1-209 PF00732::GMC_oxred_N 100.00::1-209 GO:0005829::cytosol confident hh_2jbv_A_1::1-37,41-94,114-152,154-209 very confident psy1040 614 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::73-612 PF00732::GMC_oxred_N 100.00::76-372 GO:0005829::cytosol confident hh_2jbv_A_1::74-140,145-206,208-300,302-374,376-388,403-408,413-432,435-444,446-518,522-525,529-613 very confident psy1058 512 Q8FKI9::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::6-507 PF00732::GMC_oxred_N 100.00::11-313 GO:0005829::cytosol confident hh_2jbv_A_1::8-75,81-143,146-164,167-185,187-221,223-241,243-315,317-379,381-382,386-413,417-418,422-510 very confident psy1059 512 Q8FKI9::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::6-507 PF00732::GMC_oxred_N 100.00::11-313 GO:0005829::cytosol confident hh_2jbv_A_1::8-75,81-143,146-164,167-185,187-221,223-241,243-315,317-379,381-382,386-413,417-418,422-510 very confident psy14643 801 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::256-790 PF00732::GMC_oxred_N 100.00::258-527 GO:0008205::ecdysone metabolic process confident hh_2jbv_A_1::257-267,269-294,300-362,364-405,407-457,459-528,530-540,560-560,564-565,567-581,584-601,606-607,611-611,621-696,700-703,707-793 very confident psy7388 224 Q3BXK8::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Xanthomonas campestris pv. vesicatoria (strain 85-10) (taxid: 316273) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.97::57-221 PF00732::GMC_oxred_N 99.97::60-217 GO:0032502::developmental process confident hh_3q9t_A_1::58-120,129-214 very confident psy10349 517 B7L439::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Escherichia coli (strain 55989 / EAEC) (taxid: 585055) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::1-517 PF00732::GMC_oxred_N 100.00::1-286 GO:0042600::chorion confident hh_2jbv_A_1::1-53,58-58,60-121,123-217,219-288,290-301,306-306,320-320,326-339,343-360,364-364,369-369,371-375,386-386,388-459,463-466,470-517 very confident psy14408 720 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.97::430-720 PF00732::GMC_oxred_N 100.00::434-720 GO:0044424::intracellular part confident hh_2jbv_A_1::432-498,504-565,567-567,569-587,590-608,610-644,646-664,666-720 very confident psy939 67 B3PTE0::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Rhizobium etli (strain CIAT 652) (taxid: 491916) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.72::2-57 PF00732::GMC_oxred_N 99.70::2-59 GO:0044464::cell part confident hh_1gpe_A_1::2-58 very confident psy9925 180 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.92::28-176 PF00732::GMC_oxred_N 99.87::27-178 GO:0044464::cell part confident hh_3q9t_A_1::26-37,44-141,143-170,172-174 very confident psy3407 749 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::1-405 PF00732::GMC_oxred_N 100.00::1-206 GO:0044464::cell part confident hh_2jbv_A_1::1-37,39-41,43-81,83-209,211-221,233-234,240-276,278-318,322-322,326-366,369-381,387-405 very confident psy4105 107 P64264::Uncharacterized GMC-type oxidoreductase Mb1310 ::::Mycobacterium bovis (taxid: 1765) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.20::36-105 PF00732::GMC_oxred_N 99.29::40-105 GO:0046331::lateral inhibition confident hh_2jbv_A_1::38-43,45-105 very confident psy4101 82 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.56::6-71 PF00732::GMC_oxred_N 99.82::5-58 GO:0050660::flavin adenine dinucleotide binding confident hh_2jbv_A_1::5-60,62-70 very confident psy14407 522 B7L439::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Escherichia coli (strain 55989 / EAEC) (taxid: 585055) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::7-517 PF00732::GMC_oxred_N 100.00::5-259 GO:0055114::oxidation-reduction process confident hh_2jbv_A_1::7-20,25-25,27-88,90-90,92-110,113-131,133-167,169-187,189-261,263-271,273-275,289-289,294-294,296-325,328-328,332-333,335-339,350-350,352-423,427-429,433-520 very confident psy14811 522 B7L439::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Escherichia coli (strain 55989 / EAEC) (taxid: 585055) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::7-517 PF00732::GMC_oxred_N 100.00::5-259 GO:0055114::oxidation-reduction process confident hh_2jbv_A_1::7-20,25-25,27-88,90-90,92-110,113-131,133-167,169-187,189-261,263-271,273-275,289-289,294-294,296-325,328-328,332-333,335-339,350-350,352-423,427-429,433-520 very confident psy14810 522 B7L439::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Escherichia coli (strain 55989 / EAEC) (taxid: 585055) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::7-517 PF00732::GMC_oxred_N 100.00::5-259 GO:0055114::oxidation-reduction process confident hh_2jbv_A_1::7-20,25-25,27-88,90-90,92-110,113-131,133-167,169-187,189-261,263-271,273-275,289-289,294-294,296-325,328-328,332-333,335-339,350-350,352-423,427-429,433-520 very confident psy8945 219 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::2-214 PF05199::GMC_oxred_C 100.00::62-207 GO:0005622::intracellular confident hh_2jbv_A_1::5-34,41-44,46-46,48-75,77-120,124-127,131-217 very confident psy759 230 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 100.00::9-225 PF05199::GMC_oxred_C 100.00::74-218 GO:0005622::intracellular confident hh_2jbv_A_1::3-14,18-36,41-41,43-47,58-58,60-131,135-138,142-227 very confident psy3537 117 P64264::Uncharacterized GMC-type oxidoreductase Mb1310 ::::Mycobacterium bovis (taxid: 1765) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.93::2-112 PF05199::GMC_oxred_C 99.97::1-105 GO:0005829::cytosol confident hh_2jbv_A_1::2-21,26-114 very confident psy4110 169 Q4ZM63::Choline dehydrogenase ::Can catalyze the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine.::Pseudomonas syringae pv. syringae (strain B728a) (taxid: 205918) portable COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.97::4-154 PF05199::GMC_oxred_C 100.00::7-148 GO:0005829::cytosol confident hh_2jbv_A_1::5-61,65-68,72-161 very confident psy10421 120 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.91::4-109 PF05199::GMC_oxred_C 99.97::25-102 GO:0032502::developmental process confident rp_3t37_A_1::45-55,58-109 very confident psy15532 60 Q6UPE0::Choline dehydrogenase, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident COG2303::BetA Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] 99.80::1-57 PF05199::GMC_oxred_C 99.89::1-50 GO:0032502::developmental process confident hh_2jbv_A_1::1-59 very confident psy2199 179 Q8BJ83::TM2 domain-containing protein 3 ::::Mus musculus (taxid: 10090) confident COG2314::XynA Predicted membrane protein [Function unknown] 98.37::115-151 PF05154::TM2 99.65::115-163 GO:0016021::integral to membrane confident no hit no match psy8730 287 Q8N4W6::DnaJ homolog subfamily C member 22 ::May function as a co-chaperone.::Homo sapiens (taxid: 9606) portable COG2314::XynA Predicted membrane protein [Function unknown] 98.21::27-84 PF05154::TM2 99.50::28-78 GO:0031410::cytoplasmic vesicle confident no hit no match psy8106 196 Q9W2H1::TM2 domain-containing protein CG10795 ::::Drosophila melanogaster (taxid: 7227) very confident COG2314::XynA Predicted membrane protein [Function unknown] 98.37::101-134 PF05154::TM2 99.60::100-148 GO:0097190::apoptotic signaling pathway confident no hit no match psy3038 499 Q10714::Angiotensin-converting enzyme ::May be involved in the specific maturation or degradation of a number of bioactive peptides. May play a role in the contractions of the heart, gut and testes, and in spermatid differentiation.::Drosophila melanogaster (taxid: 7227) confident COG2317::Zn-dependent carboxypeptidase [Amino acid transport and metabolism] 100.00::123-451 PF01401::Peptidase_M2 100.00::2-477 GO:0008144::drug binding confident hh_3nxq_A_1::2-225,230-234,245-247,254-256,265-269,273-286,290-306,308-391,399-492 very confident psy4869 2435 Q55AR8::U5 small nuclear ribonucleoprotein 40 kDa protein ::::Dictyostelium discoideum (taxid: 44689) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.83::111-612 PF00112::Peptidase_C1 99.97::2174-2409 GO:0005737::cytoplasm confident no hit no match psy11104 70 Q8BND3::WD repeat-containing protein 35 ::May promote CASP3 activation and TNF-stimulated apoptosis (By similarity). Required for ciliogenesis.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 97.03::9-49 PF00400::WD40 99.36::4-42 GO:0005932::microtubule basal body confident hh_3iz6_a_1::10-56 confident psy1285 118 Q5M9G8::DDB1- and CUL4-associated factor 11 ::May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.45::9-107 PF00400::WD40 99.22::27-64 GO:0006511::ubiquitin-dependent protein catabolic process confident no hit no match psy75 120 Q27954::Coatomer subunit alpha ::Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor.::Bos taurus (taxid: 9913) confident COG2319::FOG: WD40 repeat [General function prediction only] 96.96::57-91 PF00400::WD40 99.09::54-91 GO:0010883::regulation of lipid storage confident no hit no match psy11876 68 Q9VAT2::DDB1- and CUL4-associated factor 10 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.51::2-67 PF00400::WD40 99.31::29-65 GO:0017053::transcriptional repressor complex confident no hit no match psy6444 88 Q9Y3F4::Serine-threonine kinase receptor-associated protein ::The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. STRAP may play a role in the cellular distribution of the SMN complex. Negatively regulates TGF-beta signaling but positively regulates the PDPK1 kinase activity by enhancing its autophosphorylation and by significantly reducing the association of PDPK1 with 14-3-3 protein.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.82::6-88 PF00400::WD40 99.24::5-46 GO:0030512::negative regulation of transforming growth factor beta receptor signaling pathway confident no hit no match psy12376 89 Q3UGF1::WD repeat-containing protein 19 ::May be involved in cilia function and/or assembly.::Mus musculus (taxid: 10090) portable COG2319::FOG: WD40 repeat [General function prediction only] 98.82::2-83 PF00400::WD40 99.02::2-32 GO:0031513::nonmotile primary cilium confident hh_2ovr_B_2::2-13,16-85 confident psy8253 88 Q5ZKH3::Polycomb protein EED ::Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.::Gallus gallus (taxid: 9031) confident COG2319::FOG: WD40 repeat [General function prediction only] 91.55::4-88 PF00400::WD40 97.17::48-88 GO:0042054::histone methyltransferase activity confident hh_3k26_A_1::2-88 very confident psy7058 85 Q803V5::Target of rapamycin complex subunit lst8 ::::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.94::7-84 PF00400::WD40 99.36::22-60 GO:0042393::histone binding confident no hit no match psy16880 84 Q55FR9::Coatomer subunit alpha ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.::Dictyostelium discoideum (taxid: 44689) portable COG2319::FOG: WD40 repeat [General function prediction only] 98.82::3-82 PF00400::WD40 99.44::2-41 GO:0043234::protein complex confident no hit no match psy15190 117 Q7K4B3::Probable elongator complex protein 2 ::Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (By similarity). Involved in the regulation of the STAT pathway.::Drosophila melanogaster (taxid: 7227) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.42::2-91 PF00400::WD40 99.30::7-44 GO:0046425::regulation of JAK-STAT cascade confident no hit no match psy12461 294 Q9UMS4::Pre-mRNA-processing factor 19 ::Plays a role in DNA double-strand break (DSB) repair and pre-mRNA splicing reaction. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity. Essential for spliceosome assembly in a oligomerization-dependent manner and might also be important for spliceosome stability. May have E3 ubiquitin ligase activity. The PSO4 complex is required in the DNA interstrand cross-links (ICLs) repair process. Overexpression of PRPF19 might extend the cellular life span by increasing the resistance to stress or by improving the DNA repair capacity of the cells.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 97.29::237-293 PF00400::WD40 97.98::237-266 GO:0048711::positive regulation of astrocyte differentiation confident hh_4h5i_A_1::237-247,249-293 confident psy1940 78 Q5ZL16::WD repeat domain phosphoinositide-interacting protein 3 ::::Gallus gallus (taxid: 9031) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.20::7-75 PF00400::WD40 99.38::19-57 GO:0080025::phosphatidylinositol-3,5-bisphosphate binding confident hh_3vu4_A_1::21-78 very confident psy3053 917 Q92636::Protein FAN ::Couples the p55 TNF-receptor (TNF-R55 / TNFR1) to neutral sphingomyelinase (N-SMASE). Specifically binds to the N-smase activation domain of TNF-R55. May regulate ceramide production by N-SMASE.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.84::575-912 PF02138::Beach 100.00::267-542 GO:0005057::receptor signaling protein activity confident no hit no match psy10778 556 P97412::Lysosomal-trafficking regulator ::May be required for sorting endosomal resident proteins into late multivesicular endosomes by a mechanism involving microtubules.::Mus musculus (taxid: 10090) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.65::296-545 PF02138::Beach 100.00::11-203 GO:0005829::cytosol confident no hit no match psy682 330 Q19317::Putative neurobeachin homolog ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins (By similarity). Regulates endosomal traffic in polarized epithelial cells such as the vulval precursor cells and intestinal cells. Thought to act as a negative regulator of lin-12 activity in vulval precursor cells. May have a role in the internalization process from basolateral surface of polarized epithelial cells.::Caenorhabditis elegans (taxid: 6239) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.20::2-269 PF02138::Beach 99.67::165-330 GO:0016020::membrane confident hh_1t77_A_1::165-211,213-213,274-330 very confident psy1242 540 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.33::259-524 PF02138::Beach 100.00::4-226 GO:0043025::neuronal cell body confident no hit no match psy6127 515 Q6NV31::WD repeat-containing protein 82 ::Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus.::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.90::133-512 PF02239::Cytochrom_D1 99.70::196-512 GO:0000785::chromatin confident no hit no match psy8285 507 Q5H7C0::Cell division cycle protein 20 homolog ::Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation.::Sus scrofa (taxid: 9823) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.87::167-455 PF02239::Cytochrom_D1 99.80::178-463 GO:0005680::anaphase-promoting complex confident no hit no match psy10566 604 Q5SP67::WD repeat-containing protein 26 ::May be involved in MAPK pathways.::Danio rerio (taxid: 7955) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.80::296-593 PF02239::Cytochrom_D1 99.64::291-594 GO:0005730::nucleolus confident hh_4ery_A_1::291-331,336-369,372-388,390-570,572-590 very confident psy7482 327 Q9NWT1::p21-activated protein kinase-interacting protein 1 ::Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which have been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.92::10-324 PF02239::Cytochrom_D1 99.82::25-325 GO:0005730::nucleolus confident no hit no match psy17610 515 Q5F201::WD repeat-containing protein 16 ::May play an essential role in the growth or survival of hepatocellular carcinoma (HCC).::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.95::76-472 PF02239::Cytochrom_D1 99.87::93-412 GO:0005737::cytoplasm confident no hit no match psy13969 877 Q9C0J8::pre-mRNA 3' end processing protein WDR33 ::Essential for both cleavage and polyadenylation of pre-mRNA 3' ends.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.79::154-456 PF02239::Cytochrom_D1 99.51::173-455 GO:0005737::cytoplasm confident no hit no match psy4754 304 P62882::Guanine nucleotide-binding protein subunit beta-5 ::Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.85::3-277 PF02239::Cytochrom_D1 99.67::2-276 GO:0005829::cytosol confident no hit no match psy15549 621 Q13112::Chromatin assembly factor 1 subunit B ::Complex that is thought to mediate chromatin assembly in DNA replication and DNA repair. Assembles histone octamers onto replicating DNA in vitro. CAF-1 performs the first step of the nucleosome assembly process, bringing newly synthesized histones H3 and H4 to replicating DNA; histones H2A/H2B can bind to this chromatin precursor subsequent to DNA replication to complete the histone octamer. The CCR4-NOT complex functions as general transcription regulation complex.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.86::8-485 PF02239::Cytochrom_D1 99.61::32-451 GO:0005829::cytosol confident no hit no match psy3710 424 Q640T2::WD repeat domain phosphoinositide-interacting protein 3 ::::Xenopus tropicalis (taxid: 8364) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.90::6-395 PF02239::Cytochrom_D1 99.81::23-339 GO:0005829::cytosol confident no hit no match psy8895 479 Q6BU94::Pre-mRNA-splicing factor PRP46 ::Involved in pre-mRNA splicing and required for cell cycle progression at G2/M.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.73::212-445 PF02239::Cytochrom_D1 99.48::223-466 GO:0005829::cytosol confident no hit no match psy13076 423 Q9VU68::Actin-interacting protein 1 ::Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins. Essential for organismal and cell viability. Required for the development of normal wing cell planar polarity.::Drosophila melanogaster (taxid: 7227) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.90::42-423 PF02239::Cytochrom_D1 99.70::18-383 GO:0005829::cytosol confident no hit no match psy15421 340 P17343::Guanine nucleotide-binding protein subunit beta-1 ::Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.::Caenorhabditis elegans (taxid: 6239) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.92::50-340 PF02239::Cytochrom_D1 99.69::46-340 GO:0005834::heterotrimeric G-protein complex very confident no hit no match psy519 351 P49846::Transcription initiation factor TFIID subunit 5 ::TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. May play a role in helping to anchor Taf4 within the TFIID complex. May be involved in transducing signals from various transcriptional regulators to the RNA polymerase II transcription machinery.::Drosophila melanogaster (taxid: 7227) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.89::6-294 PF02239::Cytochrom_D1 99.75::65-337 GO:0005840::ribosome confident no hit no match psy2671 573 Q9FLX9::Notchless protein homolog ::::Arabidopsis thaliana (taxid: 3702) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.93::105-572 PF02239::Cytochrom_D1 99.65::211-541 GO:0005840::ribosome confident no hit no match psy10063 894 Q7PP77::Eukaryotic translation initiation factor 3 subunit I ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.79::404-876 PF02239::Cytochrom_D1 99.70::425-842 GO:0005852::eukaryotic translation initiation factor 3 complex confident no hit no match psy710 591 Q5T5C0::Syntaxin-binding protein 5 ::Plays a regulatory role in calcium-dependent exocytosis and neurotransmitter release. Inhibits membrane fusion between transport vesicles and the plasma membrane. May modulate the assembly of trans-SNARE complexes between transport vesicles and the plasma membrane. Inhibits translocation of GLUT4 from intracellular vesicles to the plasma membrane. Competes with STXBP1 for STX1 binding.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.89::3-411 PF02239::Cytochrom_D1 99.77::20-387 GO:0005856::cytoskeleton confident hh_2oaj_A_1::2-58,60-81,84-89,91-148,150-241,244-295,299-315,317-359,361-377,379-389,401-411,414-429,434-492,498-516,529-530,552-587 very confident psy17342 401 O14576::Cytoplasmic dynein 1 intermediate chain 1 ::Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. May play a role in mediating the interaction of cytoplasmic dynein with membranous organelles and kinetochores.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.85::63-391 PF02239::Cytochrom_D1 99.68::69-398 GO:0005868::cytoplasmic dynein complex confident hh_3dm0_A_1::63-84,95-130,132-154,161-175,178-201,204-209,211-212,215-228,230-252,255-275,282-310,312-325,327-331,333-389 very confident psy226 406 Q7KNS3::Lissencephaly-1 homolog ::Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as nuclear migration during cell division, mitotic spindle formation and the removal of mitotic checkpoint proteins from kinetochores at the metaphase to anaphase transition. Required for several aspects of neurogenesis including neuroblast proliferation, neuronal cell differentiation, dendritic growth, branching and maturation and axonal transport. Required for synchronized cell divisions in the germline, fusome integrity and oocyte differentiation. Acts together with BicD, Egl, dynein and microtubules to determine oocyte identity during oogenesis. Also required for nurse cell to oocyte transport during oocyte growth and for the positioning of the nucleus in the oocyte.::Drosophila melanogaster (taxid: 7227) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.94::101-406 PF02239::Cytochrom_D1 99.73::102-405 GO:0005938::cell cortex very confident no hit no match psy17188 504 Q9JIT3::Transducin-like enhancer protein 3 ::Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.93::109-504 PF02239::Cytochrom_D1 99.81::129-478 GO:0007219::Notch signaling pathway confident no hit no match psy9770 811 Q05BC3::Echinoderm microtubule-associated protein-like 1 ::May modify the assembly dynamics of microtubules, such that microtubules are slightly longer, but more dynamic.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.89::293-735 PF02239::Cytochrom_D1 99.68::272-655 GO:0008022::protein C-terminus binding confident no hit no match psy12697 602 O60907::F-box-like/WD repeat-containing protein TBL1X ::F-box-like protein involved in the recruitment of the ubiquitin/19S proteasome complex to nuclear receptor-regulated transcription units. Plays an essential role in transcription activation mediated by nuclear receptors. Probably acts as integral component of corepressor complexes that mediates the recruitment of the 19S proteasome complex, leading to the subsequent proteasomal degradation of transcription repressor complexes, thereby allowing cofactor exchange.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.91::135-600 PF02239::Cytochrom_D1 99.80::119-519 GO:0017053::transcriptional repressor complex confident no hit no match psy6984 380 O18640::Guanine nucleotide-binding protein subunit beta-like protein ::::Drosophila melanogaster (taxid: 7227) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.88::8-375 PF02239::Cytochrom_D1 99.66::30-374 GO:0030292::protein tyrosine kinase inhibitor activity very confident no hit no match psy14906 583 Q8NI36::WD repeat-containing protein 36 ::Involved in T-cell activation and highly co-regulated with IL2.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.94::106-575 PF02239::Cytochrom_D1 99.84::125-582 GO:0030684::preribosome confident no hit no match psy17902 454 O43818::U3 small nucleolar RNA-interacting protein 2 ::Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.89::135-442 PF02239::Cytochrom_D1 99.76::133-441 GO:0034511::U3 snoRNA binding confident no hit no match psy15995 683 Q9VU68::Actin-interacting protein 1 ::Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins. Essential for organismal and cell viability. Required for the development of normal wing cell planar polarity.::Drosophila melanogaster (taxid: 7227) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.89::80-474 PF02239::Cytochrom_D1 99.84::244-648 GO:0035317::imaginal disc-derived wing hair organization confident no hit no match psy17863 341 Q5XGI5::WD repeat domain-containing protein 83 ::Molecular scaffold protein for various multimeric protein complexes. Acts as a module in the assembly of a multicomponent scaffold for the ERK pathway, linking ERK responses to specific agonists. Also involved in response to hypoxia by acting as a negative regulator of HIF1A/HIF-1-alpha.::Xenopus tropicalis (taxid: 8364) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.90::8-330 PF02239::Cytochrom_D1 99.87::26-334 GO:0043234::protein complex confident no hit no match psy10867 343 Q68EI0::WD repeat-containing protein 18 ::Involved in left-right determination through controlling the correct clustering and migration of dorsal forerunner cells (DFCs) and Kupffer's vesicle formation.::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.92::11-339 PF02239::Cytochrom_D1 99.87::6-341 GO:0043234::protein complex confident no hit no match psy6213 330 Q7ZVL2::WD repeat-containing protein 24 ::::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.91::2-304 PF02239::Cytochrom_D1 99.77::23-302 GO:0043234::protein complex confident no hit no match psy14511 488 Q9JJ66::Cell division cycle protein 20 homolog ::Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation.::Mus musculus (taxid: 10090) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.87::4-436 PF02239::Cytochrom_D1 99.84::5-402 GO:0043234::protein complex confident no hit no match psy18018 635 Q9VZF4::F-box/WD repeat-containing protein 7 ::Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins (By similarity). Involved in the degradation of cyclin E and dm/Myc. Required for endocycles, but not mitosis in follicle cell epithelium.::Drosophila melanogaster (taxid: 7227) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.82::137-620 PF02239::Cytochrom_D1 99.65::197-589 GO:0044424::intracellular part confident no hit no match psy17243 392 P49695::Probable serine/threonine-protein kinase PkwA ::May play a regulatory role during the complex growth cycle and in secondary metabolite production.::Thermomonospora curvata (taxid: 2020) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.85::3-247 PF02239::Cytochrom_D1 99.74::3-256 GO:0044428::nuclear part confident no hit no match psy10942 537 Q05946::U3 small nucleolar RNA-associated protein 13 ::Involved in nucleolar processing of pre-18S ribosomal RNA.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.85::3-537 PF02239::Cytochrom_D1 99.74::16-493 GO:0044446::intracellular organelle part confident no hit no match psy12911 356 Q7ZWF0::mRNA export factor ::Binds mRNA. May function in nucleocytoplasmic transport and in directly or indirectly attaching cytoplasmic mRNPs to the cytoskeleton.::Danio rerio (taxid: 7955) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.85::24-325 PF02239::Cytochrom_D1 99.73::45-338 GO:0045886::negative regulation of synaptic growth at neuromuscular junction very confident no hit no match psy9182 486 Q5SRY7::F-box/WD repeat-containing protein 11 ::Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. SCF(FBXW11) mediates the ubiquitination of CTNNB1 and participates in Wnt signaling. Mediates also the ubiquitination of IFNAR1 and targets phosphorylation-dependent degradation of beta-catenin. Involved in the oxidative stress-induced ubiquitin-mediated decrease of RCAN1. Promotes the degradation of CDC25A induced by ionizing radiation in cells progressing through S phase and thus may function in the intra-S-phase checkpoint (By similarity). Involved in the ubiquitination of phosphorylated NFKBIA, which degradation frees the associated NFKB1 to translocate into the nucleus and to activate transcription. Has an essential role in the control of the clock-dependent transcription via degradation of PER1 and phosphorylated PER2.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.79::101-469 PF02239::Cytochrom_D1 99.52::118-468 GO:0046599::regulation of centriole replication very confident no hit no match psy2110 622 Q15291::Retinoblastoma-binding protein 5 ::As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation.::Homo sapiens (taxid: 9606) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.91::79-489 PF02239::Cytochrom_D1 99.86::94-455 GO:0048188::Set1C/COMPASS complex very confident no hit no match psy988 408 Q9R037::WD repeat-containing protein 44 ::Downstream effector for RAB11. May be involved in vesicle recycling.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.90::1-395 PF02239::Cytochrom_D1 99.88::2-404 GO:0048471::perinuclear region of cytoplasm confident no hit no match psy6859 261 Q5NVL7::Peptidylprolyl isomerase domain and WD repeat-containing protein 1 ::Putative peptidylprolyl isomerase (PPIase). PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. May be involved in pre-mRNA splicing.::Pongo abelii (taxid: 9601) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.85::1-260 PF02239::Cytochrom_D1 99.68::17-214 GO:0071013::catalytic step 2 spliceosome confident no hit no match psy4578 860 Q9W7I5::Histone-binding protein RBBP4 ::Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA.::Gallus gallus (taxid: 9031) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.43::601-856 PF03666::NPR3 100.00::164-504 GO:0016590::ACF complex confident no hit no match psy2685 992 Q55FR9::Coatomer subunit alpha ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.::Dictyostelium discoideum (taxid: 44689) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.80::4-431 PF04053::Coatomer_WDAD 100.00::697-986 GO:0005829::cytosol confident no hit no match psy14440 711 P49846::Transcription initiation factor TFIID subunit 5 ::TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. May play a role in helping to anchor Taf4 within the TFIID complex. May be involved in transducing signals from various transcriptional regulators to the RNA polymerase II transcription machinery.::Drosophila melanogaster (taxid: 7227) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.87::382-661 PF04494::TFIID_90kDa 100.00::133-269 GO:0001075::RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly confident no hit no match psy307 1019 Q9DC48::Pre-mRNA-processing factor 17 ::Associates with the spliceosome late in the splicing pathway and may function in the second step of pre-mRNA splicing.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.73::293-632 PF04727::ELMO_CED12 100.00::851-1015 GO:0071013::catalytic step 2 spliceosome confident no hit no match psy12802 1637 Q22830::Intraflagellar transport protein osm-1 ::Required for the maintenance and formation of chemosensory cilia that detect chemosensory cues.::Caenorhabditis elegans (taxid: 6239) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.68::7-473 PF04762::IKI3 99.88::10-881 GO:0005932::microtubule basal body confident hh_2pm9_A_1::12-164,170-216,221-257,263-323,325-328,330-371 very confident psy12614 708 Q8R2N2::Cirhin ::::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.88::21-433 PF04762::IKI3 99.72::27-622 GO:0006355::regulation of transcription, DNA-dependent confident no hit no match psy9598 1915 Q921C3::Bromodomain and WD repeat-containing protein 1 ::May be a transcriptional activator. May be involved in chromatin remodeling. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape.::Mus musculus (taxid: 10090) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.83::449-845 PF06507::Auxin_resp 99.78::1247-1315 GO:0044699::single-organism process confident no hit no match psy6522 1407 Q9NSI6::Bromodomain and WD repeat-containing protein 1 ::May be a transcriptional activator. May be involved in chromatin remodeling (By similarity). Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape.::Homo sapiens (taxid: 9606) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.84::179-573 PF06507::Auxin_resp 99.78::976-1043 GO:0044699::single-organism process confident no hit no match psy9327 641 Q55FR9::Coatomer subunit alpha ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.::Dictyostelium discoideum (taxid: 44689) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.70::2-316 PF06957::COPI_C 100.00::425-589 GO:0005179::hormone activity confident no hit no match psy10114 819 Q9UM11::Fizzy-related protein homolog ::Key regulator of ligase activity of the anaphase promoting complex/cyclosome (APC/C), which confers substrate specificity upon the complex. Associates with the APC/C in late mitosis, in replacement of CDC20, and activates the APC/C during anaphase and telophase. The APC/C remains active in degrading substrates to ensure that positive regulators of the cell cycle do not accumulate prematurely. At the G1/S transition FZR1 is phosphorylated, leading to its dissociation from the APC/C. Following DNA damage, it is required for the G2 DNA damage checkpoint: its dephosphorylation and reassociation with the APC/C leads to the ubiquitination of PLK1, preventing entry into mitosis.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.79::519-802 PF08145::BOP1NT 99.96::285-517 GO:0040020::regulation of meiosis confident no hit no match psy13207 197 Q10099::Nucleoporin seh1 ::Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. Active directional transport is assured by both, a Phe-Gly (FG) repeat affinity gradient for these transport factors across the NPC and a transport cofactor concentration gradient across the nuclear envelope.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.44::7-187 PF08662::eIF2A 99.55::29-188 GO:0000776::kinetochore confident no hit no match psy9316 264 Q05583::Cytosolic iron-sulfur protein assembly protein 1 ::Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.48::30-239 PF08662::eIF2A 99.56::55-237 GO:0003677::DNA binding confident hh_2pm7_B_1::15-23,25-82,84-237 very confident psy11529 244 Q92747::Actin-related protein 2/3 complex subunit 1A ::Probably functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.82::5-242 PF08662::eIF2A 99.81::59-240 GO:0003779::actin binding confident no hit no match psy13856 271 Q3ZCC9::Protein SEC13 homolog ::Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.::Bos taurus (taxid: 9913) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.34::28-222 PF08662::eIF2A 99.48::67-219 GO:0005635::nuclear envelope confident no hit no match psy15157 344 Q99LC2::Cleavage stimulation factor subunit 1 ::One of the multiple factors required for polyadenylation and 3'-end cleavage of mammalian pre-mRNAs. May be responsible for the interaction of CSTF with other factors to form a stable complex on the pre-mRNA.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.58::110-329 PF08662::eIF2A 99.72::123-325 GO:0005654::nucleoplasm confident no hit no match psy4876 609 Q12834::Cell division cycle protein 20 homolog ::Required for full ubiquitin ligase activity of the anaphase promoting complex/cyclosome (APC/C) and may confer substrate specificity upon the complex. Is regulated by MAD2L1: in metaphase the MAD2L1-CDC20-APC/C ternary complex is inactive and in anaphase the CDC20-APC/C binary complex is active in degrading substrates. The CDC20-APC/C complex positively regulates the formation of synaptic vesicle clustering at active zone to the presynaptic membrane in postmitotic neurons. CDC20-APC/C-induced degradation of NEUROD2 induces presynaptic differentiation.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.78::270-585 PF08662::eIF2A 99.56::421-588 GO:0005680::anaphase-promoting complex confident no hit no match psy3337 297 Q9WTV0::Prolactin regulatory element-binding protein ::Was first identified based on its probable role in the regulation of pituitary gene transcription. Binds to the prolactin gene (PRL) promoter and seems to activate transcription. Guanine nucleotide exchange factor that activates SARA2. Required for the formation of COPII transport vesicles from the ER.::Rattus norvegicus (taxid: 10116) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.74::3-295 PF08662::eIF2A 99.72::122-295 GO:0005783::endoplasmic reticulum confident no hit no match psy10662 221 Q8NHY2::E3 ubiquitin-protein ligase RFWD2 ::E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.84::5-220 PF08662::eIF2A 99.80::56-220 GO:0005813::centrosome confident no hit no match psy11518 139 Q9NWT1::p21-activated protein kinase-interacting protein 1 ::Negatively regulates the PAK1 kinase. PAK1 is a member of the PAK kinase family, which have been shown to play a positive role in the regulation of signaling pathways involving MAPK8 and RELA. PAK1 exists as an inactive homodimer, which is activated by binding of small GTPases such as CDC42 to an N-terminal regulatory domain. PAK1IP1 also binds to the N-terminus of PAK1, and inhibits the specific activation of PAK1 by CDC42.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.43::10-132 PF08662::eIF2A 99.72::15-138 GO:0005815::microtubule organizing center confident no hit no match psy4653 229 O55029::Coatomer subunit beta' ::This coatomer complex protein, essential for Golgi budding and vesicular trafficking, is a selective binding protein (RACK) for protein kinase C, epsilon type. It binds to Golgi membranes in a GTP-dependent manner.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.84::6-220 PF08662::eIF2A 99.65::19-178 GO:0005829::cytosol confident hh_3mkq_A_1::4-228 very confident psy14458 125 O94967::WD repeat-containing protein 47 ::::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.32::5-122 PF08662::eIF2A 99.58::49-122 GO:0005829::cytosol confident no hit no match psy6446 134 P49695::Probable serine/threonine-protein kinase PkwA ::May play a regulatory role during the complex growth cycle and in secondary metabolite production.::Thermomonospora curvata (taxid: 2020) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.59::1-133 PF08662::eIF2A 99.80::11-133 GO:0005829::cytosol confident no hit no match psy2762 318 Q3ZCC9::Protein SEC13 homolog ::Functions as a component of the nuclear pore complex (NPC) and the COPII coat. At the endoplasmic reticulum, SEC13 is involved in the biogenesis of COPII-coated vesicles.::Bos taurus (taxid: 9913) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.83::8-302 PF08662::eIF2A 99.43::159-298 GO:0005829::cytosol very confident no hit no match psy16005 248 Q5RKI0::WD repeat-containing protein 1 ::Induces disassembly of actin filaments in conjunction with ADF/cofilin family proteins.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.82::14-247 PF08662::eIF2A 99.80::62-245 GO:0005829::cytosol confident no hit no match psy15417 176 P17343::Guanine nucleotide-binding protein subunit beta-1 ::Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.::Caenorhabditis elegans (taxid: 6239) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.72::15-176 PF08662::eIF2A 99.68::25-176 GO:0005834::heterotrimeric G-protein complex very confident no hit no match psy14961 320 P62882::Guanine nucleotide-binding protein subunit beta-5 ::Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.82::16-296 PF08662::eIF2A 99.59::178-296 GO:0005834::heterotrimeric G-protein complex confident no hit no match psy10953 181 P49695::Probable serine/threonine-protein kinase PkwA ::May play a regulatory role during the complex growth cycle and in secondary metabolite production.::Thermomonospora curvata (taxid: 2020) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.59::4-166 PF08662::eIF2A 99.76::14-164 GO:0005840::ribosome confident no hit no match psy11885 327 Q1JQB2::Mitotic checkpoint protein BUB3 ::Has a dual function in spindle-assembly checkpoint signaling and in promoting the establishment of correct kinetochore-microtubule (K-MT) attachments. Promotes the formation of stable end-on bipolar attachments. Necessary for kinetochore localization of BUB1. Regulates chromosome segregation during oocyte meiosis. The BUB1/BUB3 complex plays a role in the inhibition of anaphase-promoting complex or cyclosome (APC/C) when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20. This complex can also phosphorylate MAD1L1.::Bos taurus (taxid: 9913) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.70::12-296 PF08662::eIF2A 99.34::12-132 GO:0005875::microtubule associated complex very confident no hit no match psy11524 323 Q8K057::Intraflagellar transport protein 80 homolog ::Component of the intraflagellar transport (IFT) complex B, which is essential for the development and maintenance of motile and sensory cilia.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.76::39-322 PF08662::eIF2A 99.75::85-242 GO:0005929::cilium confident no hit no match psy11100 110 Q8BND3::WD repeat-containing protein 35 ::May promote CASP3 activation and TNF-stimulated apoptosis (By similarity). Required for ciliogenesis.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.72::8-105 PF08662::eIF2A 99.20::13-105 GO:0005932::microtubule basal body confident hh_2aq5_A_1::11-49,54-56,60-108 very confident psy15612 131 Q9JIT3::Transducin-like enhancer protein 3 ::Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES.::Rattus norvegicus (taxid: 10116) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.64::1-130 PF08662::eIF2A 99.84::16-130 GO:0007219::Notch signaling pathway very confident no hit no match psy1859 162 Q1JQB2::Mitotic checkpoint protein BUB3 ::Has a dual function in spindle-assembly checkpoint signaling and in promoting the establishment of correct kinetochore-microtubule (K-MT) attachments. Promotes the formation of stable end-on bipolar attachments. Necessary for kinetochore localization of BUB1. Regulates chromosome segregation during oocyte meiosis. The BUB1/BUB3 complex plays a role in the inhibition of anaphase-promoting complex or cyclosome (APC/C) when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20. This complex can also phosphorylate MAD1L1.::Bos taurus (taxid: 9913) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.50::9-161 PF08662::eIF2A 99.73::17-162 GO:0008608::attachment of spindle microtubules to kinetochore confident no hit no match psy11350 471 Q3MHE2::U4/U6 small nuclear ribonucleoprotein Prp4 ::Involved in pre-mRNA splicing.::Bos taurus (taxid: 9913) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.80::147-403 PF08662::eIF2A 99.65::246-401 GO:0015030::Cajal body confident no hit no match psy4571 437 P90916::Probable histone-binding protein lin-53 ::Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA (By similarity). Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that repress transcription.::Caenorhabditis elegans (taxid: 6239) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.71::32-357 PF08662::eIF2A 99.56::107-289 GO:0016581::NuRD complex confident rp_2xyi_A_1::108-276 very confident psy4577 384 Q9W7I5::Histone-binding protein RBBP4 ::Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA.::Gallus gallus (taxid: 9031) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.56::4-356 PF08662::eIF2A 99.54::245-330 GO:0016590::ACF complex very confident no hit no match psy3840 131 O60907::F-box-like/WD repeat-containing protein TBL1X ::F-box-like protein involved in the recruitment of the ubiquitin/19S proteasome complex to nuclear receptor-regulated transcription units. Plays an essential role in transcription activation mediated by nuclear receptors. Probably acts as integral component of corepressor complexes that mediates the recruitment of the 19S proteasome complex, leading to the subsequent proteasomal degradation of transcription repressor complexes, thereby allowing cofactor exchange.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.40::3-124 PF08662::eIF2A 99.70::3-117 GO:0017053::transcriptional repressor complex confident no hit no match psy7433 213 Q8TDJ6::DmX-like protein 2 ::May serve as a scaffold protein for MADD and RAB3GA on synaptic vesicles.::Homo sapiens (taxid: 9606) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.73::2-206 PF08662::eIF2A 99.75::12-205 GO:0017137::Rab GTPase binding confident no hit no match psy6442 231 Q54LT8::Serine-threonine kinase receptor-associated protein ::The SMN complex plays an essential role in spliceosomal snRNP assembly in the cytoplasm and is required for pre-mRNA splicing in the nucleus. STRAP may play a role in the cellular distribution of the SMN complex.::Dictyostelium discoideum (taxid: 44689) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.59::3-204 PF08662::eIF2A 99.46::30-200 GO:0030512::negative regulation of transforming growth factor beta receptor signaling pathway confident no hit no match psy2107 391 P91343::Ribosome biogenesis protein WDR12 homolog ::Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.::Caenorhabditis elegans (taxid: 6239) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.83::111-391 PF08662::eIF2A 99.59::275-390 GO:0030687::preribosome, large subunit precursor confident no hit no match psy7108 703 Q15269::Periodic tryptophan protein 2 homolog ::::Homo sapiens (taxid: 9606) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.50::27-285 PF08662::eIF2A 99.38::51-244 GO:0032040::small-subunit processome confident no hit no match psy17135 106 P58405::Striatin-3 ::Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.95::4-106 PF08662::eIF2A 99.27::6-106 GO:0032403::protein complex binding very confident no hit no match psy9278 98 A4QNE6::WD repeat-containing protein 92 ::Seems to act as a modulator of apoptosis.::Xenopus tropicalis (taxid: 8364) confident COG2319::FOG: WD40 repeat [General function prediction only] 91.46::22-98 PF08662::eIF2A 97.80::22-98 GO:0034968::histone lysine methylation confident hh_3i2n_A_1::6-98 very confident psy6415 174 A4QNE6::WD repeat-containing protein 92 ::Seems to act as a modulator of apoptosis.::Xenopus tropicalis (taxid: 8364) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.16::5-109 PF08662::eIF2A 99.25::2-109 GO:0034968::histone lysine methylation confident hh_3i2n_A_1::1-79,81-111,130-174 very confident psy10348 291 Q5ZKH3::Polycomb protein EED ::Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' and 'Lys-27' of histone H3, leading to transcriptional repression of the affected target gene.::Gallus gallus (taxid: 9031) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.82::6-291 PF08662::eIF2A 99.68::3-134 GO:0042054::histone methyltransferase activity very confident no hit no match psy14456 93 O94967::WD repeat-containing protein 47 ::::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.90::2-90 PF08662::eIF2A 99.27::4-88 GO:0042393::histone binding confident no hit no match psy3639 113 Q5BK30::Outer row dynein assembly protein 16 homolog ::May play a role in axonemal outer row dynein assembly.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.45::3-113 PF08662::eIF2A 99.71::3-112 GO:0042393::histone binding confident no hit no match psy2113 183 Q6NX08::Ribosome biogenesis protein wdr12 ::Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.::Danio rerio (taxid: 7955) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.41::11-177 PF08662::eIF2A 99.65::6-174 GO:0042393::histone binding confident no hit no match psy16373 166 Q39836::Guanine nucleotide-binding protein subunit beta-like protein ::::Glycine max (taxid: 3847) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.43::13-158 PF08662::eIF2A 99.50::44-164 GO:0043234::protein complex confident no hit no match psy15191 312 Q5EBD9::Elongator complex protein 2 ::Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.::Xenopus tropicalis (taxid: 8364) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.79::42-312 PF08662::eIF2A 99.72::140-312 GO:0043234::protein complex confident no hit no match psy13945 86 Q5ND34::WD repeat-containing protein 81 ::::Mus musculus (taxid: 10090) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.01::2-84 PF08662::eIF2A 99.21::2-77 GO:0043234::protein complex confident no hit no match psy11015 360 Q5R650::WD repeat-containing protein 37 ::::Pongo abelii (taxid: 9601) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.52::170-353 PF08662::eIF2A 99.58::184-354 GO:0043234::protein complex confident no hit no match psy8430 361 Q5R650::WD repeat-containing protein 37 ::::Pongo abelii (taxid: 9601) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.49::151-343 PF08662::eIF2A 99.54::160-309 GO:0043234::protein complex confident no hit no match psy505 161 Q5ZHN3::WD repeat domain phosphoinositide-interacting protein 2 ::Probable early component of the autophagy machinery being involved in formation of preautophagosomal structures and their maturation into mature phagosomes in response to PtdIns3P. May bind PtdIns3P.::Gallus gallus (taxid: 9031) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.30::12-148 PF08662::eIF2A 99.10::17-136 GO:0043234::protein complex confident hh_3vu4_A_2::15-31,37-56,58-96,99-156 confident psy16881 222 Q5ZIU8::Katanin p80 WD40 repeat-containing subunit B1 ::Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.::Gallus gallus (taxid: 9031) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.29::26-211 PF08662::eIF2A 99.61::28-220 GO:0043234::protein complex confident no hit no match psy11036 239 Q8C7V3::U3 small nucleolar RNA-associated protein 15 homolog ::Involved in nucleolar processing of pre-18S ribosomal RNA.::Mus musculus (taxid: 10090) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.81::5-237 PF08662::eIF2A 99.77::46-227 GO:0043234::protein complex confident no hit no match psy2085 358 Q802W4::Nucleolar protein 10 ::::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.85::43-190 PF08662::eIF2A 99.39::46-190 GO:0044424::intracellular part confident no hit no match psy2083 248 Q802W4::Nucleolar protein 10 ::::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.98::11-147 PF08662::eIF2A 99.18::14-142 GO:0044424::intracellular part confident hh_4ggc_A_1::22-43,50-71,74-110,112-147 confident psy7062 148 Q803V5::Target of rapamycin complex subunit lst8 ::::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.81::15-131 PF08662::eIF2A 99.52::14-127 GO:0044424::intracellular part confident no hit no match psy8758 198 Q803X4::DDB1- and CUL4-associated factor 13 ::Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.73::2-194 PF08662::eIF2A 99.87::5-196 GO:0044424::intracellular part confident no hit no match psy14817 138 Q32PJ6::Probable cytosolic iron-sulfur protein assembly protein CIAO1 ::Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Seems to specifically modulate the transactivation activity of WT1. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation.::Bos taurus (taxid: 9913) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.30::1-136 PF08662::eIF2A 99.63::1-137 GO:0044428::nuclear part confident no hit no match psy8891 203 Q5RAC9::Autophagy-related protein 16-1 ::Plays an essential role in autophagy.::Pongo abelii (taxid: 9601) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.31::2-200 PF08662::eIF2A 99.47::2-134 GO:0044428::nuclear part confident no hit no match psy9936 315 Q9Z0H1::WD repeat-containing protein 46 ::::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.80::10-243 PF08662::eIF2A 99.77::55-212 GO:0044446::intracellular organelle part confident no hit no match psy3599 223 Q5RF24::WD repeat-containing protein 13 ::::Pongo abelii (taxid: 9601) confident COG2319::FOG: WD40 repeat [General function prediction only] 98.97::57-221 PF08662::eIF2A 99.43::79-219 GO:0044699::single-organism process confident no hit no match psy4391 231 Q5M786::WD repeat-containing protein 5 ::Contributes to histone modification. May position the N-terminus of histone H3 for efficient trimethylation at 'Lys-4'. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. May regulate osteoblasts differentiation.::Xenopus tropicalis (taxid: 8364) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.80::29-226 PF08662::eIF2A 99.76::73-226 GO:0048188::Set1C/COMPASS complex very confident no hit no match psy4393 247 Q5M786::WD repeat-containing protein 5 ::Contributes to histone modification. May position the N-terminus of histone H3 for efficient trimethylation at 'Lys-4'. As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. May regulate osteoblasts differentiation.::Xenopus tropicalis (taxid: 8364) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.81::28-233 PF08662::eIF2A 99.74::73-227 GO:0048188::Set1C/COMPASS complex very confident no hit no match psy16316 335 Q6NV31::WD repeat-containing protein 82 ::Component of a chromatin regulatory complex involved in regulating chromatin structure in the nucleus.::Danio rerio (taxid: 7955) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.86::16-313 PF08662::eIF2A 99.47::26-178 GO:0048188::Set1C/COMPASS complex very confident hh_1got_B_1::11-76,79-119,121-181,184-185,189-234,236-279,281-309 very confident psy12788 254 Q5RHH4::Intraflagellar transport protein 172 homolog ::Required for the maintenance and formation of cilia.::Danio rerio (taxid: 7955) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.19::2-204 PF08662::eIF2A 99.49::7-132 GO:0048731::system development confident hh_3dwl_C_1::6-40,45-47,49-83,85-89,91-201 confident psy12456 162 Q5ZMA2::Pre-mRNA-processing factor 19 ::Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity.::Gallus gallus (taxid: 9031) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.70::6-162 PF08662::eIF2A 99.77::12-162 GO:0071013::catalytic step 2 spliceosome confident no hit no match psy8448 482 Q7ZVA0::WD40 repeat-containing protein SMU1 ::::Danio rerio (taxid: 7955) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.85::95-352 PF08662::eIF2A 99.68::153-319 GO:0071013::catalytic step 2 spliceosome very confident no hit no match psy17133 116 P58405::Striatin-3 ::Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.33::2-116 PF08662::eIF2A 99.79::3-114 GO:0072686::mitotic spindle confident no hit no match psy8803 111 Q4KLI9::F-box/WD repeat-containing protein 5 ::Substrate recognition component of both SCF (SKP1-CUL1-F-box protein) and DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes. Substrate recognition component of the SCF(FBXW5) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of SASS6 during S phase, leading to prevent centriole reduplication. Substrate-specific adapter of the DCX(FBXW5) E3 ubiquitin-protein ligase complex which mediates the polyubiquitination and subsequent degradation of TSC2. May also act as a negative regulator of MAP3K7/TAK1 signaling in the interleukin-1B (IL1B) signaling pathway.::Rattus norvegicus (taxid: 10116) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.03::3-111 PF08662::eIF2A 99.37::4-111 GO:0080008::Cul4-RING ubiquitin ligase complex confident no hit no match psy18074 197 Q5ZLK1::DDB1- and CUL4-associated factor 13 ::Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.::Gallus gallus (taxid: 9031) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.36::5-160 PF08662::eIF2A 99.69::14-156 GO:0080008::Cul4-RING ubiquitin ligase complex confident no hit no match psy11351 224 Q80T85::DDB1- and CUL4-associated factor 5 ::May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.79::9-204 PF08662::eIF2A 99.73::40-204 GO:0080008::Cul4-RING ubiquitin ligase complex confident hh_2pm9_A_2::3-168,174-178,180-203 very confident psy18091 377 Q32PJ6::Probable cytosolic iron-sulfur protein assembly protein CIAO1 ::Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins. Seems to specifically modulate the transactivation activity of WT1. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation.::Bos taurus (taxid: 9913) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.83::45-375 PF08662::eIF2A 99.54::101-261 GO:0097361::CIA complex very confident no hit no match psy14130 494 A8WGE3::Coronin-2B ::May play a role in the reorganization of neuronal actin structure.::Xenopus tropicalis (taxid: 8364) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.75::150-385 PF08954::DUF1900 99.93::302-437 GO:0016477::cell migration confident no hit no match psy17682 490 Q9ULV4::Coronin-1C ::May be involved in cytokinesis, motility, and signal transduction.::Homo sapiens (taxid: 9606) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.85::39-425 PF08954::DUF1900 99.77::341-473 GO:0030027::lamellipodium confident no hit no match psy7057 557 Q9Y263::Phospholipase A-2-activating protein ::Involved in the maintenance of ubiquitin levels.::Homo sapiens (taxid: 9606) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.74::7-274 PF09070::PFU 100.00::315-525 GO:0043234::protein complex confident no hit no match psy2305 334 O59762::Guanine nucleotide-binding protein negative regulator 1 ::Negatively regulates the pheromone-response pathway. Acts as a structural mimic of the G protein beta subunit thereby interacting with gpa1 which then inhibits gpa1 signaling.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.89::2-332 PF10282::Lactonase 99.77::4-277 GO:0005622::intracellular confident hh_3dm0_A_2::2-36,51-54,56-66,74-105,108-142,144-148,153-171,173-198,200-220,223-233,235-278 very confident psy8152 444 Q58D06::WD repeat-containing protein 74 ::::Bos taurus (taxid: 9913) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.88::5-361 PF10282::Lactonase 99.72::9-324 GO:0005730::nucleolus confident no hit no match psy17688 349 P61962::DDB1- and CUL4-associated factor 7 ::Involved in craniofacial development. Acts upstream of the EDN1 pathway and is required for formation of the upper jaw equivalent, the palatoquadrate. The activity required for EDN1 pathway function differs between the first and second arches (By similarity). Associates with DIAPH1 and controls GLI1 transcriptional activity. Could be involved in normal and disease skin development. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.::Homo sapiens (taxid: 9606) very confident COG2319::FOG: WD40 repeat [General function prediction only] 99.84::19-349 PF10282::Lactonase 99.73::40-349 GO:0080008::Cul4-RING ubiquitin ligase complex very confident no hit no match psy4510 812 Q810D6::Glutamate-rich WD repeat-containing protein 1 ::::Mus musculus (taxid: 10090) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.85::172-445 PF12265::CAF1C_H4-bd 99.67::63-131 GO:0005829::cytosol confident hh_2xyi_A_2::177-186,188-361,363-397,400-448,452-499 very confident psy4579 368 P90916::Probable histone-binding protein lin-53 ::Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA (By similarity). Synthetic multivulva class B (synMuvB) protein. SynMuvB proteins are required to repress the induction of vulval development by Ras signaling and probably act by forming the multiprotein DRM complex that repress transcription.::Caenorhabditis elegans (taxid: 6239) confident COG2319::FOG: WD40 repeat [General function prediction only] 99.57::37-361 PF12265::CAF1C_H4-bd 99.32::17-93 GO:0042826::histone deacetylase binding confident no hit no match psy467 845 Q5ZIU8::Katanin p80 WD40 repeat-containing subunit B1 ::Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.::Gallus gallus (taxid: 9031) portable COG2319::FOG: WD40 repeat [General function prediction only] 99.79::10-390 PF13925::Katanin_con80 99.61::453-549 GO:0005622::intracellular confident no hit no match psy10688 169 Q9CYL5::Golgi-associated plant pathogenesis-related protein 1 ::::Mus musculus (taxid: 10090) confident COG2340::Uncharacterized protein with SCP/PR1 domains [Function unknown] 99.20::1-125 PF00188::CAP 99.87::7-140 GO:0043231::intracellular membrane-bounded organelle confident hh_3nt8_A_1::2-39,44-58,60-87,90-90,93-96,98-127,130-131,134-164 very confident psy11882 110 Q9CWG1::Glioma pathogenesis-related protein 1 ::::Mus musculus (taxid: 10090) portable COG2340::Uncharacterized protein with SCP/PR1 domains [Function unknown] 96.61::2-84 PF00188::CAP 99.56::2-93 GO:0044464::cell part confident hh_1cfe_A_1::2-15,20-30,34-41,43-46,51-104 very confident psy10686 147 Q9CYL5::Golgi-associated plant pathogenesis-related protein 1 ::::Mus musculus (taxid: 10090) confident COG2340::Uncharacterized protein with SCP/PR1 domains [Function unknown] 95.50::1-58 PF00188::CAP 99.65::1-118 GO:0044464::cell part confident hh_2vzn_A_1::1-17,22-36,38-44,46-65,68-68,71-74,76-135 very confident psy11267 103 Q5M872::Dipeptidase 2 ::Probable metalloprotease which hydrolyzes leukotriene D4 (LTD4) into leukotriene E4 (LTE4).::Rattus norvegicus (taxid: 10116) confident COG2355::Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism] 100.00::1-101 PF01244::Peptidase_M19 100.00::1-101 GO:0030336::negative regulation of cell migration confident hh_3id7_A_1::1-101 very confident psy12861 292 P31428::Dipeptidase 1 ::Hydrolyzes a wide range of dipeptides. Implicated in the renal metabolism of glutathione and its conjugates. Converts leukotriene D4 to leukotriene E4; it may play an important role in the regulation of leukotriene activity.::Mus musculus (taxid: 10090) confident COG2355::Zn-dependent dipeptidase, microsomal dipeptidase homolog [Amino acid transport and metabolism] 100.00::42-292 PF01244::Peptidase_M19 100.00::1-292 GO:0070573::metallodipeptidase activity confident hh_3id7_A_1::1-24,33-62,65-97,100-110,112-129,131-143,153-198,218-223,236-292 very confident psy10181 198 Q6ZPE2::Myotubularin-related protein 5 ::Probable pseudophosphatase. Lacks several amino acids in the catalytic pocket which renders it catalytically inactive as a phosphatase. The pocket is however sufficiently preserved to bind phosphorylated substrates, and maybe protect them from phosphatases. Inhibits myoblast differentiation in vitro and induces oncogenic transformation in fibroblasts.::Mus musculus (taxid: 10090) portable COG2365::Protein tyrosine/serine phosphatase [Signal transduction mechanisms] 94.61::116-164 PF06602::Myotub-related 100.00::2-197 GO:0055037::recycling endosome confident hh_1lw3_A_1::2-40,54-60,88-197 very confident psy15726 171 P21333::Filamin-A ::Promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. Anchors various transmembrane proteins to the actin cytoskeleton and serves as a scaffold for a wide range of cytoplasmic signaling proteins. Interaction with FLNA may allow neuroblast migration from the ventricular zone into the cortical plate. Tethers cell surface-localized furin, modulates its rate of internalization and directs its intracellular trafficking.::Homo sapiens (taxid: 9606) portable COG2373::Large extracellular alpha-helical protein [General function prediction only] 93.43::63-168 PF00630::Filamin 99.91::48-136 GO:0043229::intracellular organelle confident hh_2e9j_A_1::31-140 very confident psy742 713 Q8R422::CD109 antigen ::Modulates negatively TGFB1 signaling in keratinocytes.::Mus musculus (taxid: 10090) portable COG2373::Large extracellular alpha-helical protein [General function prediction only] 99.73::14-610 PF07678::A2M_comp 100.00::167-406 GO:0019731::antibacterial humoral response confident hh_4acq_A_1::14-48,53-63,71-127,129-141,143-172,174-223,232-251,257-257,259-328,334-343,348-412,414-423,426-478,484-515,518-546,550-590,592-614 very confident psy5522 1397 Q8R422::CD109 antigen ::Modulates negatively TGFB1 signaling in keratinocytes.::Mus musculus (taxid: 10090) confident COG2373::Large extracellular alpha-helical protein [General function prediction only] 100.00::97-997 PF07678::A2M_comp 100.00::931-1279 GO:0019731::antibacterial humoral response confident hh_4acq_A_1::1-38,42-273,275-347,350-358,364-386,388-703,705-764,778-845,847-1026,1094-1098,1128-1129,1140-1141,1156-1279,1340-1395 very confident psy9572 163 Q8R422::CD109 antigen ::Modulates negatively TGFB1 signaling in keratinocytes.::Mus musculus (taxid: 10090) portable COG2373::Large extracellular alpha-helical protein [General function prediction only] 99.62::3-161 PF10569::Thiol-ester_cl 99.80::133-163 GO:0019222::regulation of metabolic process confident hh_3prx_B_1::3-119,124-163 very confident psy15923 68 F1RKQ4::Bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase (cyclizing) ::Catalyzes both the phosphorylation of dihydroxyacetone and of glyceraldehyde, and the splitting of ribonucleoside diphosphate-X compounds among which FAD is the best substrate.::Sus scrofa (taxid: 9823) confident COG2376::DAK1 Dihydroxyacetone kinase [Carbohydrate transport and metabolism] 99.77::2-68 PF02733::Dak1 99.96::1-68 GO:0005829::cytosol confident hh_1un8_A_1::1-48,51-51,55-68 very confident psy16139 466 Q09235::Uncharacterized protein C13B9.2 ::::Caenorhabditis elegans (taxid: 6239) confident COG2379::GckA Putative glycerate kinase [Carbohydrate transport and metabolism] 100.00::2-330 PF13660::DUF4147 100.00::2-248 GO:0005794::Golgi apparatus confident hh_1x3l_A_1::2-39,41-65,67-67,69-81,89-99,101-189,191-254,256-331 very confident psy9348 308 Q09235::Uncharacterized protein C13B9.2 ::::Caenorhabditis elegans (taxid: 6239) confident COG2379::GckA Putative glycerate kinase [Carbohydrate transport and metabolism] 100.00::2-307 PF13660::DUF4147 100.00::2-248 GO:0043798::glycerate 2-kinase activity confident hh_1x3l_A_1::2-39,41-65,67-67,69-81,89-99,101-189,191-307 very confident psy11622 346 Q3MHI8::tRNA methyltransferase 10 homolog A ::Probable RNA methyltransferase.::Bos taurus (taxid: 9913) confident COG2419::Uncharacterized conserved protein [Function unknown] 99.92::104-282 PF01746::tRNA_m1G_MT 100.00::117-282 GO:0030488::tRNA methylation confident hh_4fmw_A_1::91-98,102-265,267-283 very confident psy13395 224 Q8FVE4::Ornithine cyclodeaminase ::::Brucella suis biovar 1 (strain 1330) (taxid: 204722) portable COG2423::Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] 100.00::17-216 PF02423::OCD_Mu_crystall 100.00::18-217 GO:0005737::cytoplasm confident hh_1omo_A_1::18-63,66-78,86-148,152-203,205-216 very confident psy13389 617 P51523::Zinc finger protein 84 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG2423::Predicted ornithine cyclodeaminase, mu-crystallin homolog [Amino acid transport and metabolism] 99.93::485-617 PF02423::OCD_Mu_crystall 99.86::488-617 GO:0048523::negative regulation of cellular process confident hh_2i13_A_1::221-354,356-404 very confident psy9550 271 O14974::Protein phosphatase 1 regulatory subunit 12A ::Key regulator of protein phosphatase 1C (PPP1C). Mediates binding to myosin. As part of the PPP1C complex, involved in dephosphorylation of PLK1. Capable of inhibiting HIF1AN-dependent suppression of HIF1A activity.::Homo sapiens (taxid: 9606) portable COG2433::Uncharacterized conserved protein [Function unknown] 95.24::184-260 PF13870::DUF4201 95.44::187-216 GO:0005856::cytoskeleton confident hh_3s9g_A_1::230-242,246-262 confident psy10374 65 Q3T104::Protein transport protein Sec61 subunit gamma ::Necessary for protein translocation in the endoplasmic reticulum.::Bos taurus (taxid: 9913) very confident COG2443::Sss1 Preprotein translocase subunit Sss1 [Intracellular trafficking and secretion] 99.94::3-57 PF00584::SecE 98.81::3-57 GO:0010507::negative regulation of autophagy confident hh_2wwb_B_1::2-60 very confident psy4327 187 Q9LMK0::60S ribosomal protein L35a-1 ::::Arabidopsis thaliana (taxid: 3702) confident COG2451::Ribosomal protein L35AE/L33A [Translation, ribosomal structure and biogenesis] 100.00::78-187 PF01247::Ribosomal_L35Ae 100.00::81-181 GO:0022625::cytosolic large ribosomal subunit confident hh_4a18_H_1::77-132,140-187 very confident psy6368 317 Q6NN85::Protein phosphatase Slingshot ::Protein phosphatase which regulates actin filament dynamics. Dephosphorylates and activates the actin binding/depolymerizing factor tsr/cofilin, which subsequently binds to actin filaments and stimulates their disassembly.::Drosophila melanogaster (taxid: 7227) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 97.39::148-242 PF00782::DSPc 99.57::141-243 GO:0003779::actin binding confident hh_2nt2_A_1::141-246 very confident psy6369 123 Q6NN85::Protein phosphatase Slingshot ::Protein phosphatase which regulates actin filament dynamics. Dephosphorylates and activates the actin binding/depolymerizing factor tsr/cofilin, which subsequently binds to actin filaments and stimulates their disassembly.::Drosophila melanogaster (taxid: 7227) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.85::18-113 PF00782::DSPc 100.00::2-115 GO:0005634::nucleus confident hh_2nt2_A_1::2-118 very confident psy15044 154 Q9BVJ7::Dual specificity protein phosphatase 23 ::Protein phosphatase that mediates dephosphorylation of proteins phosphorylated on Tyr and Ser/Thr residues. In vitro, it can dephosphorylate p44-ERK1 (MAPK3) but not p54 SAPK-beta (MAPK10) in vitro. Able to enhance activation of JNK and p38 (MAPK14).::Homo sapiens (taxid: 9606) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.82::63-151 PF00782::DSPc 99.95::26-153 GO:0005730::nucleolus confident hh_2img_A_1::12-56,58-152 very confident psy7473 136 Q66GT5::Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 ::Protein phosphatase that specifically mediates dephosphorylation of mitochondrial proteins, thereby playing an essential role in ATP production. Has probably a preference for proteins phosphorylated on Ser and/or Thr residues compared to proteins phosphorylated on Tyr residues. Probably involved in regulation of insulin secretion in pancreatic beta cells.::Mus musculus (taxid: 10090) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.75::72-136 PF00782::DSPc 99.94::33-135 GO:0005739::mitochondrion confident hh_3rgo_A_1::25-135 very confident psy16347 288 Q99956::Dual specificity protein phosphatase 9 ::Inactivates MAP kinases. Has a specificity for the ERK family.::Homo sapiens (taxid: 9606) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.65::58-135 PF00782::DSPc 99.95::22-152 GO:0005829::cytosol confident rp_2hxp_A_1::41-161 very confident psy12442 208 Q78EG7::Protein tyrosine phosphatase type IVA 1 ::Protein tyrosine phosphatase which stimulates progression from G1 into S phase during mitosis. May play a role in the development and maintenance of differentiating epithelial tissues.::Rattus norvegicus (taxid: 10116) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.72::57-157 PF00782::DSPc 99.92::29-155 GO:0009898::internal side of plasma membrane confident hh_3s4o_A_1::13-154 very confident psy7475 295 Q66GT5::Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 ::Protein phosphatase that specifically mediates dephosphorylation of mitochondrial proteins, thereby playing an essential role in ATP production. Has probably a preference for proteins phosphorylated on Ser and/or Thr residues compared to proteins phosphorylated on Tyr residues. Probably involved in regulation of insulin secretion in pancreatic beta cells.::Mus musculus (taxid: 10090) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.59::71-156 PF00782::DSPc 99.93::33-164 GO:0016311::dephosphorylation confident hh_3rgo_A_1::25-136,139-166 very confident psy15942 211 O13632::Tyrosine-protein phosphatase yvh1 ::May be directly involved in signal transduction and/or cell cycle regulation. It is necessary for maintaining growth rate or spore germination. Could show both activity toward tyrosine-protein phosphate as well as with serine-protein phosphate.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.79::77-178 PF00782::DSPc 99.94::49-175 GO:0016791::phosphatase activity confident hh_1zzw_A_1::43-45,47-180 very confident psy14072 205 O95147::Dual specificity protein phosphatase 14 ::Involved in the inactivation of MAP kinases. Dephosphorylates ERK, JNK and p38 MAP-kinases.::Homo sapiens (taxid: 9606) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.74::75-178 PF00782::DSPc 99.97::44-171 GO:0035335::peptidyl-tyrosine dephosphorylation confident hh_3s4e_A_1::35-72,74-172 very confident psy1565 146 Q8WTR2::Dual specificity protein phosphatase 19 ::Has a dual specificity toward Ser/Thr and Tyr-containing proteins.::Homo sapiens (taxid: 9606) portable COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.81::38-136 PF00782::DSPc 99.96::12-139 GO:0046328::regulation of JNK cascade confident hh_3emu_A_1::6-36,40-145 very confident psy18175 132 Q99956::Dual specificity protein phosphatase 9 ::Inactivates MAP kinases. Has a specificity for the ERK family.::Homo sapiens (taxid: 9606) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.86::28-126 PF00782::DSPc 99.97::12-122 GO:0046328::regulation of JNK cascade confident hh_1zzw_A_1::1-127 very confident psy13471 249 Q9JIM4::Dual specificity protein phosphatase 12 ::Seems to dephosphorylate glucokinase.::Rattus norvegicus (taxid: 10116) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.69::44-138 PF00782::DSPc 99.98::9-137 GO:0046328::regulation of JNK cascade confident hh_3emu_A_1::2-140 very confident psy1264 209 Q9NRW4::Dual specificity protein phosphatase 22 ::Activates the Jnk signaling pathway. Dephosphorylates and deactivates p38 and stress-activated protein kinase/c-Jun N-terminal kinase (SAPK/JNK).::Homo sapiens (taxid: 9606) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.53::68-144 PF00782::DSPc 99.96::23-145 GO:0048523::negative regulation of cellular process confident hh_1yz4_A_1::14-56,66-160 very confident psy16333 192 Q9HBL0::Tensin-1 ::May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton.::Homo sapiens (taxid: 9606) portable COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 98.33::2-58 PF10409::PTEN_C2 99.96::63-191 GO:0005925::focal adhesion confident hh_3n0a_A_1::8-118,121-123,128-154,156-156,160-171,174-192 very confident psy3115 226 Q6GQT0::Dual specificity protein phosphatase CDC14A ::Dual-specificity phosphatase. Required for centrosome separation and productive cytokinesis during cell division. May dephosphorylate the APC subunit FZR1/CDH1, thereby promoting APC-FZR1 dependent degradation of mitotic cyclins and subsequent exit from mitosis.::Mus musculus (taxid: 10090) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 95.80::50-128 PF14671::DSPn 100.00::19-162 GO:0005813::centrosome confident hh_1ohe_A_1::12-35,38-130,132-223 very confident psy3113 328 Q6GQT0::Dual specificity protein phosphatase CDC14A ::Dual-specificity phosphatase. Required for centrosome separation and productive cytokinesis during cell division. May dephosphorylate the APC subunit FZR1/CDH1, thereby promoting APC-FZR1 dependent degradation of mitotic cyclins and subsequent exit from mitosis.::Mus musculus (taxid: 10090) confident COG2453::CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] 99.59::238-328 PF14671::DSPn 100.00::19-162 GO:0048523::negative regulation of cellular process confident hh_1ohe_A_1::12-35,38-130,132-317,322-328 very confident psy665 180 Q8TB61::Adenosine 3'-phospho 5'-phosphosulfate transporter 1 ::Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.::Homo sapiens (taxid: 9606) confident COG2510::Predicted membrane protein [Function unknown] 99.35::24-161 PF08449::UAA 99.97::1-169 GO:0046964::3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity confident hh_3b5d_A_1::98-163 portable psy14971 156 A4JEQ0::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Burkholderia vietnamiensis (strain G4 / LMG 22486) (taxid: 269482) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.95::1-133 PF01135::PCMT 99.94::1-131 GO:0005737::cytoplasm confident hh_1r18_A_1::2-37,39-42,46-98,100-127 very confident psy8015 165 O27962::Protein-L-isoaspartate O-methyltransferase 2 ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 100.00::7-160 PF01135::PCMT 100.00::6-156 GO:0005737::cytoplasm confident hh_2pbf_A_1::8-133,135-154 very confident psy7830 364 Q9GPS6::Probable protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Dictyostelium discoideum (taxid: 44689) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 100.00::64-269 PF01135::PCMT 100.00::62-269 GO:0005737::cytoplasm confident hh_2pbf_A_1::61-97,101-247,249-268 very confident psy7829 511 A3CXP8::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) (taxid: 368407) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 100.00::66-273 PF01135::PCMT 100.00::64-274 GO:0005829::cytosol confident rp_1i1n_A_1::67-268 very confident psy7837 299 A4JEQ0::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Burkholderia vietnamiensis (strain G4 / LMG 22486) (taxid: 269482) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 100.00::9-269 PF01135::PCMT 99.97::6-271 GO:0005829::cytosol confident hh_3lbf_A_1::12-24,27-62,65-88,92-114,181-235,238-247,249-264,266-270 very confident psy10573 206 A9R115::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Yersinia pestis bv. Antiqua (strain Angola) (taxid: 349746) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.97::1-195 PF01135::PCMT 99.97::1-196 GO:0005829::cytosol confident hh_3mb5_A_1::29-45,48-100,105-117,120-121,124-161 very confident psy7834 492 O27962::Protein-L-isoaspartate O-methyltransferase 2 ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.95::143-328 PF01135::PCMT 99.94::143-318 GO:0005829::cytosol confident rp_1i1n_A_1::147-171,176-321,330-337,340-349 very confident psy7826 213 O27962::Protein-L-isoaspartate O-methyltransferase 2 ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) (taxid: 224325) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.95::55-213 PF01135::PCMT 99.95::53-212 GO:0005829::cytosol confident hh_1i1n_A_1::49-211 very confident psy5588 61 P80895::Protein-L-isoaspartate(D-aspartate) O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.::Sus scrofa (taxid: 9823) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.72::1-56 PF01135::PCMT 99.66::1-56 GO:0005829::cytosol confident hh_1i1n_A_1::1-59 very confident psy5587 126 P80895::Protein-L-isoaspartate(D-aspartate) O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.::Sus scrofa (taxid: 9823) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.81::10-106 PF01135::PCMT 99.72::10-106 GO:0005829::cytosol confident hh_1i1n_A_1::36-112 very confident psy10572 204 P80895::Protein-L-isoaspartate(D-aspartate) O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl and D-aspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. Acts on microtubule-associated protein 2, calreticulin, clathrin light chains a and b, Ubiquitin carboxyl-terminal hydrolase isozyme L1, phosphatidylethanolamine-binding protein 1, stathmin, beta-synuclein and alpha-synuclein.::Sus scrofa (taxid: 9823) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 100.00::1-191 PF01135::PCMT 99.97::1-193 GO:0005829::cytosol confident rp_1r18_A_1::1-9,13-173,175-185 very confident psy5757 139 Q27873::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. This enzyme does not act on D-aspartyl residues.::Caenorhabditis elegans (taxid: 6239) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.71::4-124 PF01135::PCMT 99.71::4-123 GO:0005829::cytosol confident hh_2pbf_A_1::5-78,80-102,105-123 very confident psy5585 110 Q27873::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. This enzyme does not act on D-aspartyl residues.::Caenorhabditis elegans (taxid: 6239) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.77::1-100 PF01135::PCMT 99.79::1-99 GO:0005829::cytosol confident hh_2pbf_A_1::1-96 very confident psy425 254 Q27873::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. This enzyme does not act on D-aspartyl residues.::Caenorhabditis elegans (taxid: 6239) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.97::10-251 PF01135::PCMT 99.97::8-251 GO:0005829::cytosol confident hh_2pbf_A_1::3-57,121-125,140-212,214-250 very confident psy14969 687 Q9YDA1::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) (taxid: 272557) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.94::528-681 PF01135::PCMT 99.93::532-680 GO:0005829::cytosol confident hh_2pbf_A_1::513-526,532-561,564-675 very confident psy14962 216 Q9YDA1::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) (taxid: 272557) confident COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.88::2-158 PF01135::PCMT 99.87::2-159 GO:0005829::cytosol confident hh_1o54_A_1::14-66,71-84,86-124 very confident psy7827 140 Q9YDA1::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) (taxid: 272557) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.90::7-139 PF01135::PCMT 99.92::5-139 GO:0005829::cytosol confident hh_1r18_A_1::6-9,12-41,45-126 very confident psy7843 255 Q9YDA1::Protein-L-isoaspartate O-methyltransferase ::Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.::Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) (taxid: 272557) portable COG2518::Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] 99.90::121-244 PF01135::PCMT 99.93::120-252 GO:0005829::cytosol confident hh_2pbf_A_1::119-154,159-252 very confident psy16898 324 B8A5G9::tRNA (guanine(37)-N1)-methyltransferase ::Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding.::Danio rerio (taxid: 7955) confident COG2520::Predicted methyltransferase [General function prediction only] 100.00::47-317 PF02475::Met_10 100.00::62-274 GO:0030488::tRNA methylation confident hh_3a27_A_1::46-80,85-86,88-93,95-123,125-208,211-212,214-225,227-228,247-274,283-294 very confident psy6637 105 Q9VGH7::Chloride channel protein 2 ::Voltage-gated chloride channel. Chloride channels have several functions including the regulation of cell volume; membrane potential stabilization, signal transduction and transepithelial transport.::Drosophila melanogaster (taxid: 7227) confident COG2524::Predicted transcriptional regulator, contains C-terminal CBS domains [Transcription] 98.18::25-77 PF00571::CBS 99.08::25-75 GO:0043204::perikaryon confident hh_2d4z_A_1::1-77 very confident psy7515 106 Q54PZ2::Copper transport protein ATOX1 homolog ::Could bind and deliver cytosolic copper to the copper ATPase proteins. May be important in cellular antioxidant defense.::Dictyostelium discoideum (taxid: 44689) confident COG2608::CopZ Copper chaperone [Inorganic ion transport and metabolism] 99.46::37-102 PF00403::HMA 99.49::39-98 GO:0000785::chromatin confident hh_3iwl_A_1::37-61,64-65,67-105 very confident psy13020 81 Q64446::Copper-transporting ATPase 2 ::Involved in the export of copper out of the cells, such as the efflux of hepatic copper into the bile.::Mus musculus (taxid: 10090) portable COG2608::CopZ Copper chaperone [Inorganic ion transport and metabolism] 98.82::47-81 PF00403::HMA 98.98::49-81 GO:0005507::copper ion binding confident hh_2rop_A_1::4-81 very confident psy13022 93 P49015::Copper-transporting ATPase 1 (Fragment) ::May function in the export of copper from the cytoplasm to an intracellular organelle. It may serve as well for the export of other metals.::Cricetulus griseus (taxid: 10029) portable COG2608::CopZ Copper chaperone [Inorganic ion transport and metabolism] 99.49::5-65 PF00403::HMA 99.62::3-62 GO:0005923::tight junction confident hh_2rop_A_1::7-67 very confident psy13021 287 A6QK47::Copper-exporting P-type ATPase A ::Involved in copper export.::Staphylococcus aureus (strain Newman) (taxid: 426430) portable COG2608::CopZ Copper chaperone [Inorganic ion transport and metabolism] 99.31::53-119 PF00403::HMA 99.37::128-189 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2rop_A_1::126-272 very confident psy2375 929 Q89AR0::Pyruvate dehydrogenase E1 component ::The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).::Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) (taxid: 224915) very confident COG2609::AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion] 100.00::1-877 PF00456::Transketolase_N 100.00::78-445 GO:0005829::cytosol very confident hh_2qtc_A_1::4-487,489-489,491-721,724-795,798-820,822-881 very confident psy11412 290 Q63836::Selenium-binding protein 2 ::Selenium- and acetaminophen-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport.::Mus musculus (taxid: 10090) confident COG2706::3-carboxymuconate cyclase [Carbohydrate transport and metabolism] 99.96::30-277 PF10282::Lactonase 99.95::31-276 GO:0005730::nucleolus confident hh_2ece_A_2::2-4,6-83,98-100,104-141 very confident psy14902 985 Q9FIW4::Beta-glucosidase 42 ::::Arabidopsis thaliana (taxid: 3702) portable COG2723::BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] 100.00::36-563 PF00232::Glyco_hydro_1 100.00::36-563 GO:0005773::vacuole confident hh_2e9l_A_2::665-699,701-804,806-879,882-985 very confident psy3005 79 P97265::Cytosolic beta-glucosidase ::Seems to be involved in the intestinal absorption and metabolism of dietary flavonoid glycosides. Able to hydrolyze a broad variety of glycosides including phytoestrogens, flavonols, flavones, flavanones and cyanogens. Possesses beta-glycosylceramidase activity and may be involved in a nonlysosomal catabolic pathway of glycosylceramide.::Cavia porcellus (taxid: 10141) portable COG2723::BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] 99.91::5-79 PF00232::Glyco_hydro_1 99.89::5-79 GO:0005829::cytosol confident hh_1wcg_A_1::5-48,51-79 very confident psy14903 241 Q6UWM7::Lactase-like protein ::::Homo sapiens (taxid: 9606) portable COG2723::BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] 100.00::1-205 PF00232::Glyco_hydro_1 100.00::1-238 GO:0044237::cellular metabolic process confident hh_1v02_A_1::1-64,66-120,122-146,149-161,172-240 very confident psy1995 211 P68401::Platelet-activating factor acetylhydrolase IB subunit beta ::Inactivates PAF by removing the acetyl group at the sn-2 position. This is a catalytic subunit.::Bos taurus (taxid: 9913) confident COG2755::TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] 99.84::37-210 PF13472::Lipase_GDSL_2 99.92::39-204 GO:0005829::cytosol confident hh_1es9_A_1::2-162,167-210 very confident psy9943 135 P68401::Platelet-activating factor acetylhydrolase IB subunit beta ::Inactivates PAF by removing the acetyl group at the sn-2 position. This is a catalytic subunit.::Bos taurus (taxid: 9913) portable COG2755::TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism] 98.70::12-88 PF13472::Lipase_GDSL_2 99.04::1-75 GO:0044424::intracellular part confident hh_1fxw_F_1::1-31,36-93 very confident psy7978 542 O96553::C-1-tetrahydrofolate synthase, cytoplasmic ::::Drosophila melanogaster (taxid: 7227) confident COG2759::MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] 100.00::140-542 PF01268::FTHFS 100.00::138-542 GO:0004488::methylenetetrahydrofolate dehydrogenase (NADP+) activity confident hh_1b0a_A_1::1-66,73-120 very confident psy4802 103 P09440::C-1-tetrahydrofolate synthase, mitochondrial ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG2759::MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] 100.00::4-102 PF01268::FTHFS 100.00::4-102 GO:0005829::cytosol confident hh_3do6_A_1::4-68,77-102 very confident psy7967 353 P27653::C-1-tetrahydrofolate synthase, cytoplasmic ::::Rattus norvegicus (taxid: 10116) confident COG2759::MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] 100.00::1-353 PF01268::FTHFS 100.00::1-353 GO:0005829::cytosol confident hh_3do6_A_1::1-22,24-108,112-161,170-204,222-226,256-262,288-292,313-319,321-347 very confident psy8591 570 O96553::C-1-tetrahydrofolate synthase, cytoplasmic ::::Drosophila melanogaster (taxid: 7227) portable COG2759::MIS1 Formyltetrahydrofolate synthetase [Nucleotide transport and metabolism] 100.00::21-201 PF01268::FTHFS 100.00::21-201 GO:0044464::cell part confident hh_3do6_A_1::22-71,80-107,109-113,115-121,123-130,137-154,159-174,181-186,191-200 very confident psy2196 142 Q9XZH6::V-type proton ATPase subunit G ::Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) very confident COG2811::NtpF Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion] 98.09::2-108 PF03179::V-ATPase_G 99.97::3-107 GO:0005829::cytosol confident hh_4efa_G_1::2-114 very confident psy2197 394 Q9XZH6::V-type proton ATPase subunit G ::Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Drosophila melanogaster (taxid: 7227) confident COG2811::NtpF Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion] 94.76::317-374 PF11945::WASH_WAHD 100.00::42-277 GO:0043231::intracellular membrane-bounded organelle confident hh_4efa_G_1::312-390 confident psy879 317 Q9WUK4::Replication factor C subunit 2 ::The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. This subunit binds ATP.::Mus musculus (taxid: 10090) very confident COG2812::DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] 100.00::2-310 PF05496::RuvB_N 99.97::2-201 GO:0005663::DNA replication factor C complex very confident hh_1sxj_B_1::2-231,235-311 very confident psy12150 456 Q99J62::Replication factor C subunit 4 ::The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. This subunit may be involved in the elongation of the multiprimed DNA template.::Mus musculus (taxid: 10090) confident COG2812::DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] 100.00::33-300 PF05496::RuvB_N 99.95::27-246 GO:0005829::cytosol confident hh_2chq_A_1::31-127,135-245,248-274,304-305,375-409,411-451 very confident psy17903 355 Q99J62::Replication factor C subunit 4 ::The elongation of primed DNA templates by DNA polymerase delta and epsilon requires the action of the accessory proteins proliferating cell nuclear antigen (PCNA) and activator 1. This subunit may be involved in the elongation of the multiprimed DNA template.::Mus musculus (taxid: 10090) very confident COG2812::DnaX DNA polymerase III, gamma/tau subunits [DNA replication, recombination, and repair] 100.00::33-350 PF05496::RuvB_N 99.97::29-246 GO:0005829::cytosol very confident hh_2chq_A_1::31-127,131-131,136-245,248-308,310-350 very confident psy10821 200 Q70BM6::Solute carrier family 22 member 8 ::Plays an important role in the excretion/detoxification of endogenous and exogenous organic anions, especially from the brain and kidney.::Sus scrofa (taxid: 9823) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 98.94::46-163 PF00083::Sugar_tr 99.29::43-176 GO:0005452::inorganic anion exchanger activity confident hh_4gc0_A_1::44-175 confident psy2962 690 Q9VCA2::Organic cation transporter protein ::Probably transports organic cations.::Drosophila melanogaster (taxid: 7227) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.97::134-615 PF00083::Sugar_tr 100.00::184-624 GO:0005452::inorganic anion exchanger activity confident hh_2gfp_A_1::185-329,374-452,455-507,509-535 confident psy4871 494 P17809::Solute carrier family 2, facilitated glucose transporter member 1 ::Facilitative glucose transporter. This isoform may be responsible for constitutive or basal glucose uptake. Has a very broad substrate specificity; can transport a wide range of aldoses including both pentoses and hexoses.::Mus musculus (taxid: 10090) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::49-450 PF00083::Sugar_tr 100.00::56-460 GO:0005794::Golgi apparatus confident hh_4gc0_A_1::48-79,83-250,252-254,256-279,283-374,383-466 very confident psy1725 837 Q8N4V2::Synaptic vesicle 2-related protein ::::Homo sapiens (taxid: 9606) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.97::172-350 PF00083::Sugar_tr 99.97::181-834 GO:0008021::synaptic vesicle confident hh_4aps_A_1::206-348 confident psy3965 535 Q9R0W2::Solute carrier family 22 member 2 ::Mediates tubular uptake of organic compounds from circulation. Mediates the influx of agmatine, serotonin, choline, ranitidine, histamin, creatinine, amantadine, memantine, acriflavine, 4-[4-(dimethylamino)-styryl]-N-methylpyridinium ASP and amiloride (By similarity). Mediates the influx of adrenaline, noradrenaline (norepinephrine), dopamine, cimetidine, famotidine, metformin, N-1-methylnicotinamide (NMN), 1-methyl-4-phenylpyridinium (MPP), tetraethylammonium (TEA), oxaliplatin and cisplatin. Cisplatin may develop a nephrotoxic action. Transport of creatinine is inhibited by fluoroquinolones such as DX-619 and LVFX. This transporter is a major determinant of the anticancer activity of oxaliplatin and may contribute to antitumor specificity.::Rattus norvegicus (taxid: 10116) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.95::149-531 PF00083::Sugar_tr 99.97::154-530 GO:0008509::anion transmembrane transporter activity confident hh_1pw4_A_1::158-178,184-312,329-336,339-401,425-532 confident psy7005 88 O95528::Solute carrier family 2, facilitated glucose transporter member 10 ::Facilitative glucose transporter.::Homo sapiens (taxid: 9606) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 98.05::2-63 PF00083::Sugar_tr 99.38::1-77 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::2-86 confident psy13784 388 P39932::Sugar transporter STL1 ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::1-369 PF00083::Sugar_tr 100.00::1-386 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::1-57,61-114,116-145,153-176,179-271,282-388 very confident psy13206 478 P45598::Arabinose-proton symporter ::Uptake of arabinose across the boundary membrane with the concomitant transport of protons into the cell (symport system).::Klebsiella oxytoca (taxid: 571) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.96::29-420 PF00083::Sugar_tr 100.00::2-439 GO:0015574::trehalose transmembrane transporter activity very confident hh_4gc0_A_1::2-198,204-222,224-229,234-326,335-443 very confident psy16658 318 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.97::2-299 PF00083::Sugar_tr 99.92::2-314 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::2-201,209-317 very confident psy5073 115 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 98.81::20-94 PF00083::Sugar_tr 99.47::7-108 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::6-113 confident psy15865 156 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 97.92::2-70 PF00083::Sugar_tr 99.57::1-102 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::2-91 confident psy7924 481 P93051::Sugar transporter ERD6-like 7 ::Sugar transporter.::Arabidopsis thaliana (taxid: 3702) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::8-444 PF00083::Sugar_tr 100.00::27-459 GO:0015574::trehalose transmembrane transporter activity confident hh_1pw4_A_1::6-17,21-22,24-81,84-85,90-96,99-126,147-158,168-211,225-230,232-236,238-258,263-272,274-343,348-348,354-374,376-444 very confident psy15539 333 Q07647::Solute carrier family 2, facilitated glucose transporter member 3 ::Facilitative glucose transporter. Probably a neuronal glucose transporter.::Rattus norvegicus (taxid: 10116) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.92::66-243 PF00083::Sugar_tr 99.92::75-333 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::65-275,277-286,288-299,304-332 confident psy10222 1693 Q8MKK4::Facilitated trehalose transporter Tret1-2 homolog ::Fails to transport trehalose.::Drosophila melanogaster (taxid: 7227) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.97::1229-1660 PF00083::Sugar_tr 100.00::1237-1675 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::1225-1439,1441-1446,1458-1468,1470-1471,1475-1559,1561-1565,1568-1683 very confident psy6142 483 Q8MKK4::Facilitated trehalose transporter Tret1-2 homolog ::Fails to transport trehalose.::Drosophila melanogaster (taxid: 7227) very confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.94::21-445 PF00083::Sugar_tr 100.00::27-462 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::12-207,214-218,222-257,289-350,358-466 very confident psy69 157 Q9FRL3::Sugar transporter ERD6-like 6 ::Sugar transporter.::Arabidopsis thaliana (taxid: 3702) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.65::15-132 PF00083::Sugar_tr 99.64::21-156 GO:0015574::trehalose transmembrane transporter activity confident hh_4aps_A_1::15-24,26-135 confident psy11547 587 Q9UGQ3::Solute carrier family 2, facilitated glucose transporter member 6 ::Facilitative glucose transporter; binds cytochalasin B with low affinity.::Homo sapiens (taxid: 9606) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::88-524 PF00083::Sugar_tr 100.00::94-539 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::84-182,188-301,306-313,318-329,332-422,434-546 very confident psy10231 607 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::31-557 PF00083::Sugar_tr 100.00::34-572 GO:0015770::sucrose transport confident hh_4gc0_A_1::34-52,56-174,191-191,195-199,279-341,343-353,357-364,369-458,467-578 very confident psy168 130 Q92339::High-affinity gluconate transporter ght3 ::High-affinity gluconate transporter.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.14::1-82 PF00083::Sugar_tr 99.69::1-107 GO:0031090::organelle membrane confident hh_4gc0_A_1::2-107 confident psy8366 513 Q9UGQ3::Solute carrier family 2, facilitated glucose transporter member 6 ::Facilitative glucose transporter; binds cytochalasin B with low affinity.::Homo sapiens (taxid: 9606) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::37-475 PF00083::Sugar_tr 100.00::43-491 GO:0032502::developmental process confident hh_4gc0_A_1::32-70,75-258,274-276,278-278,282-284,286-291,295-384,386-498 very confident psy2966 237 Q9U539::Organic cation transporter 1 ::Transports organic cations such as tetraethylammonium (TEA). Displays a broad substrate specificity.::Caenorhabditis elegans (taxid: 6239) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.86::2-235 PF00083::Sugar_tr 99.89::9-171 GO:0042221::response to chemical stimulus confident hh_4gc0_A_1::9-102,104-171 confident psy12745 175 Q69ZS6::Synaptic vesicle glycoprotein 2C ::Receptor for the botulinium neurotoxin type A/BOTA.::Mus musculus (taxid: 10090) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 96.79::7-83 PF00083::Sugar_tr 99.59::2-160 GO:0043231::intracellular membrane-bounded organelle confident hh_4gc0_A_1::7-26,34-51,56-160 confident psy8697 508 Q9UGQ3::Solute carrier family 2, facilitated glucose transporter member 6 ::Facilitative glucose transporter; binds cytochalasin B with low affinity.::Homo sapiens (taxid: 9606) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::37-490 PF00083::Sugar_tr 100.00::55-507 GO:0043231::intracellular membrane-bounded organelle confident hh_4gc0_A_1::40-106,109-182,184-201,209-238,243-253,255-257,262-346,364-369,403-508 very confident psy12153 236 A7MBE0::Solute carrier family 22 member 1 ::Translocates a broad array of organic cations with various structures and molecular weights including the model compounds 1-methyl-4-phenylpyridinium (MPP), tetraethylammonium (TEA), N-1-methylnicotinamide (NMN), 4-(4-(dimethylamino)styryl)-N-methylpyridinium (ASP), the endogenous compounds choline, guanidine, histamine, epinephrine, adrenaline, noradrenaline and dopamine, and the drugs quinine, and metformin. The transport of organic cations is inhibited by a broad array of compounds like tetramethylammonium (TMA), cocaine, lidocaine, NMDA receptor antagonists, atropine, prazosin, cimetidine, TEA and NMN, guanidine, cimetidine, choline, procainamide, quinine, tetrabutylammonium, and tetrapentylammonium. Translocates organic cations in an electrogenic and pH-independent manner. Translocates organic cations across the plasma membrane in both directions. Transports the polyamines spermine and spermidine. Transports pramipexole across the basolateral membrane of the proximal tubular epithelial cells. The choline transport is activated by MMTS. Regulated by various intracellular signaling pathways including inhibition by protein kinase A activation, and endogenously activation by the calmodulin complex, the calmodulin-dependent kinase II and LCK tyrosine kinase.::Bos taurus (taxid: 9913) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.78::15-184 PF00083::Sugar_tr 99.79::27-206 GO:0044425::membrane part confident hh_1pw4_A_2::20-22,26-115,134-179 confident psy7008 101 Q4F7G0::Sugar transporter ERD6-like 2 ::Sugar transporter.::Arabidopsis thaliana (taxid: 3702) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 98.20::5-100 PF00083::Sugar_tr 99.00::6-101 GO:0044446::intracellular organelle part confident hh_4gc0_A_1::6-53,56-100 confident psy3292 213 no hit no match COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.72::4-159 PF00083::Sugar_tr 99.72::13-205 GO:0044464::cell part confident hh_4aps_A_1::42-157 confident psy7519 213 Q9U539::Organic cation transporter 1 ::Transports organic cations such as tetraethylammonium (TEA). Displays a broad substrate specificity.::Caenorhabditis elegans (taxid: 6239) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.24::59-173 PF00083::Sugar_tr 99.37::45-177 GO:0071702::organic substance transport confident hh_4aps_A_1::46-56,59-172 confident psy1201 179 Q61672::Equilibrative nucleoside transporter 2 ::Mediates equilibrative transport of purine and pyrimidine nucleosides, and the purine base hypoxanthine.::Mus musculus (taxid: 10090) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 95.13::52-172 PF01733::Nucleoside_tran 100.00::5-176 GO:0071705::nitrogen compound transport confident hh_1pw4_A_2::55-92,94-99,101-106,114-172 portable psy10432 440 Q28E13::Major facilitator superfamily domain-containing protein 5 ::::Xenopus tropicalis (taxid: 8364) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::30-414 PF07690::MFS_1 100.00::22-375 GO:0005794::Golgi apparatus very confident hh_4aps_A_1::45-128,135-173,176-245,247-284,286-306,308-318,324-378,382-386,389-414 confident psy10046 805 Q6P2X9::Monocarboxylate transporter 12 ::Proton-linked monocarboxylate transporter.::Xenopus tropicalis (taxid: 8364) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.97::162-804 PF07690::MFS_1 99.95::177-802 GO:0005886::plasma membrane confident hh_1pw4_A_2::180-256,258-337 confident psy6058 235 Q7RTX9::Monocarboxylate transporter 14 ::Proton-linked monocarboxylate transporter. Catalyzes the rapid transport across the plasma membrane of many monocarboxylates.::Homo sapiens (taxid: 9606) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.66::3-130 PF07690::MFS_1 99.66::3-127 GO:0005886::plasma membrane confident hh_1pw4_A_1::3-39,41-48,50-127 confident psy4795 285 Q9Y115::UNC93-like protein ::::Drosophila melanogaster (taxid: 7227) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.46::18-213 PF07690::MFS_1 99.38::84-227 GO:0005886::plasma membrane confident hh_4aps_A_1::79-143,148-232 confident psy2964 208 Q9WTW5::Solute carrier family 22 member 3 ::Mediates potential-dependent transport of a variety of organic cations. May play a significant role in the disposition of cationic neurotoxins and neurotransmitters in the brain.::Mus musculus (taxid: 10090) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.83::50-205 PF07690::MFS_1 99.78::54-205 GO:0006812::cation transport confident hh_1pw4_A_1::52-59,61-61,65-160,162-208 confident psy13786 219 P22732::Solute carrier family 2, facilitated glucose transporter member 5 ::Cytochalasin B-sensitive carrier. Seems to function primarily as a fructose transporter.::Homo sapiens (taxid: 9606) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.88::47-218 PF07690::MFS_1 99.82::62-214 GO:0015149::hexose transmembrane transporter activity confident hh_4gc0_A_1::43-165,169-216 confident psy5074 204 P58354::Solute carrier family 2, facilitated glucose transporter member 8 ::Insulin-regulated facilitative glucose transporter. Binds cytochalasin B in a glucose-inhibitable manner. Seems to be a dual-specific sugar transporter as it is inhibitable by fructose.::Bos taurus (taxid: 9913) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.80::5-183 PF07690::MFS_1 99.79::3-184 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::3-84,92-202 confident psy15540 87 Q8GXK5::Sugar transporter ERD6-like 14 ::Sugar transporter.::Arabidopsis thaliana (taxid: 3702) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.02::9-84 PF07690::MFS_1 98.84::9-81 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::24-76 confident psy6141 144 Q8MKK4::Facilitated trehalose transporter Tret1-2 homolog ::Fails to transport trehalose.::Drosophila melanogaster (taxid: 7227) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.80::2-141 PF07690::MFS_1 99.74::13-142 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::6-141 confident psy11010 256 Q01827::Synaptic vesicular amine transporter ::Involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters. Pumps cytosolic monoamines including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. Requisite for vesicular amine storage prior to secretion via exocytosis.::Rattus norvegicus (taxid: 10116) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.94::55-238 PF07690::MFS_1 99.91::66-239 GO:0015844::monoamine transport confident hh_1pw4_A_1::55-86,88-91,93-180,182-242 confident psy16660 594 P70187::Hippocampus abundant transcript 1 protein ::::Mus musculus (taxid: 10090) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::116-573 PF07690::MFS_1 100.00::103-507 GO:0016021::integral to membrane confident hh_4aps_A_1::97-115,117-135,137-224,284-515 confident psy16666 167 P70187::Hippocampus abundant transcript 1 protein ::::Mus musculus (taxid: 10090) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.71::10-160 PF07690::MFS_1 99.67::20-159 GO:0016021::integral to membrane confident hh_4aps_A_1::1-31,33-160 confident psy3615 211 Q9JI12::Vesicular glutamate transporter 2 ::Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells. May also play a role in the endocrine glutamatergic system of other tissues such as pineal gland and pancreas. May also mediate the transport of inorganic phosphate.::Rattus norvegicus (taxid: 10116) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.92::20-182 PF07690::MFS_1 99.88::21-184 GO:0031090::organelle membrane confident hh_4aps_A_1::26-90,93-182 confident psy14075 414 Q01827::Synaptic vesicular amine transporter ::Involved in the ATP-dependent vesicular transport of biogenic amine neurotransmitters. Pumps cytosolic monoamines including dopamine, norepinephrine, serotonin, and histamine into synaptic vesicles. Requisite for vesicular amine storage prior to secretion via exocytosis.::Rattus norvegicus (taxid: 10116) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::17-376 PF07690::MFS_1 100.00::17-337 GO:0043195::terminal bouton confident hh_2gfp_A_1::17-114,116-259,262-305,309-314,316-357 very confident psy10294 226 P38695::Probable glucose transporter HXT5 ::Probable glucose transporter.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.63::11-188 PF07690::MFS_1 99.54::11-166 GO:0043231::intracellular membrane-bounded organelle confident hh_4gc0_A_1::3-76,78-166,181-199 confident psy10938 314 Q69ZS6::Synaptic vesicle glycoprotein 2C ::Receptor for the botulinium neurotoxin type A/BOTA.::Mus musculus (taxid: 10090) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.96::24-307 PF07690::MFS_1 99.87::34-273 GO:0043231::intracellular membrane-bounded organelle confident hh_1pw4_A_1::23-58,60-305 confident psy17194 871 O17444::Vesicular acetylcholine transporter ::Involved in acetylcholine transport into synaptic vesicles.::Drosophila melanogaster (taxid: 7227) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 100.00::39-455 PF07690::MFS_1 99.97::49-420 GO:0043679::axon terminus confident hh_1pw4_A_1::41-73,75-75,103-187,189-342,345-386,390-455 very confident psy3157 822 Q8T9B6::LDLR chaperone boca ::Chaperone specifically assisting the folding of beta-propeller/EGF modules within the family of low-density lipoprotein receptors (LDLRs). Acts as a modulator of the Wg pathway, since some LDLRs are coreceptors for the canonical Wnt pathway.::Drosophila melanogaster (taxid: 7227) confident COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.96::213-805 PF07690::MFS_1 99.88::216-388 GO:0045177::apical part of cell confident hh_2kgl_A_1::54-162 very confident psy6455 249 Q63564::Synaptic vesicle glycoprotein 2B ::Receptor for the botulinium neurotoxin type A/BOTA.::Rattus norvegicus (taxid: 10116) portable COG2814::AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] 99.93::27-214 PF07690::MFS_1 99.89::35-216 GO:0071705::nitrogen compound transport confident hh_2gfp_A_1::32-176,188-219 confident psy12154 214 O94830::Phospholipase DDHD2 ::Phospholipase that hydrolyzes preferentially phosphatidic acid and phosphatidylethanolamine. May be involved in the maintenance of the endoplasmic reticulum and/or Golgi structures.::Homo sapiens (taxid: 9606) confident COG2819::Predicted hydrolase of the alpha/beta superfamily [General function prediction only] 93.33::94-149 PF07819::PGAP1 97.04::106-147 GO:0005813::centrosome confident hh_2qjw_A_1::125-147 portable psy12152 133 Q5PQP5::Structure-specific endonuclease subunit SLX1 ::Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products.::Rattus norvegicus (taxid: 10116) confident COG2827::Predicted endonuclease containing a URI domain [DNA replication, recombination, and repair] 99.97::1-117 PF01541::GIY-YIG 99.32::3-77 GO:0033557::Slx1-Slx4 complex confident hh_1zg2_A_1::2-13,18-39,43-56,58-83,101-107,110-123 very confident psy15340 81 Q9UI30::tRNA methyltransferase 112 homolog ::Participates both in methylation of protein and tRNA species. The heterodimer with HEMK2/N6AMT1 catalyzes N5-methylation of ETF1 on 'Gln-185', using S-adenosyl L-methionine as methyl donor. The heterodimer with ALKBH8 catalyzes the methylation of 5-carboxymethyl uridine to 5-methylcarboxymethyl uridine at the wobble position of the anticodon loop in target tRNA species.::Homo sapiens (taxid: 9606) confident COG2835::Uncharacterized conserved protein [Function unknown] 99.31::47-80 PF03966::Trm112p 99.62::4-70 GO:0043234::protein complex confident hh_2j6a_A_1::1-19,22-81 very confident psy13797 339 Q54K96::Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 ::Histone demethylase that specifically demethylates 'Lys-4' (H3K4me) and 'Lys-36' (H3K36me) of histone H3, thereby playing a central role in histone code.::Dictyostelium discoideum (taxid: 44689) confident COG2850::Uncharacterized conserved protein [Function unknown] 99.97::1-236 PF08007::Cupin_4 100.00::1-339 GO:0005829::cytosol confident hh_4diq_A_1::1-251,254-314,316-339 very confident psy12933 65 Q9CXT6::Lysine-specific demethylase 8 ::Histone demethylase required for G2/M phase cell cycle progression. Specifically demethylates dimethylated 'Lys-36' (H3K36me2) of histone H3, an epigenetic repressive mark, thereby acting as a transcription activator. Regulates expression of CCNA1 (cyclin-A1).::Mus musculus (taxid: 10090) confident COG2850::Uncharacterized conserved protein [Function unknown] 98.35::28-63 PF13621::Cupin_8 99.82::8-65 GO:0006355::regulation of transcription, DNA-dependent confident hh_3d8c_A_1::9-14,17-65 very confident psy10277 305 P23135::Cytochrome c1 ::Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.::Rhodospirillum rubrum (taxid: 1085) confident COG2857::CYT1 Cytochrome c1 [Energy production and conversion] 100.00::36-292 PF02167::Cytochrom_C1 100.00::37-291 GO:0005750::mitochondrial respiratory chain complex III very confident hh_1pp9_D_1::27-157,174-249,270-302 very confident psy18094 260 Q68FV1::Trimeric intracellular cation channel type B ::Monovalent cation channel required for maintenance of rapid intracellular calcium release. May act as a potassium counter-ion channel that functions in synchronization with calcium release from intracellular stores.::Rattus norvegicus (taxid: 10116) confident COG2860::Predicted membrane protein [Function unknown] 96.66::48-218 PF05197::TRIC 100.00::34-218 GO:0015672::monovalent inorganic cation transport confident no hit no match psy17404 305 P83852::Carboxypeptidase D (Fragment) ::::Lophonetta specularioides (taxid: 75873) portable COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.26::15-137 PF00246::Peptidase_M14 100.00::1-239 GO:0003214::cardiac left ventricle morphogenesis confident hh_2nsm_A_1::1-118,124-176,181-305 very confident psy15737 444 P00730::Carboxypeptidase A1 ::Carboxypeptidase that catalyzes the release of a C-terminal amino acid, but has little or no action with -Asp, -Glu, -Arg, -Lys or -Pro.::Bos taurus (taxid: 9913) confident COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.37::217-434 PF00246::Peptidase_M14 100.00::203-440 GO:0005615::extracellular space confident hh_2c1c_A_1::192-276,278-316,318-325,341-442 very confident psy17405 241 P18143::Zinc carboxypeptidase ::Combines the specificities of mammalian Cpase A and B.::Streptomyces griseus (taxid: 1911) portable COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.47::69-189 PF00246::Peptidase_M14 100.00::55-240 GO:0005615::extracellular space confident hh_2nsm_A_1::46-94,96-169,173-203,207-235,237-240 very confident psy7680 102 P42787::Carboxypeptidase D ::Required for the proper melanization and sclerotization of the cuticle.::Drosophila melanogaster (taxid: 7227) portable COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 96.10::56-99 PF00246::Peptidase_M14 99.59::42-102 GO:0005634::nucleus confident hh_1uwy_A_1::34-81,83-102 very confident psy17663 149 Q0P4M4::Cytosolic carboxypeptidase 2 ::Metallocarboxypeptidase.::Xenopus tropicalis (taxid: 8364) confident COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.47::3-87 PF00246::Peptidase_M14 99.96::3-131 GO:0005829::cytosol confident hh_4a37_A_1::4-97,116-130 very confident psy11075 195 P18143::Zinc carboxypeptidase ::Combines the specificities of mammalian Cpase A and B.::Streptomyces griseus (taxid: 1911) portable COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.50::66-189 PF00246::Peptidase_M14 100.00::52-192 GO:0008270::zinc ion binding confident hh_3mn8_A_1::35-89,93-192 very confident psy17594 579 Q68EI3::Cytosolic carboxypeptidase-like protein 5 ::Metallocarboxypeptidase that mediates tubulin deglutamylation. Specifically catalyzes the deglutamylation of the branching point glutamate side chains generated by post-translational glutamylation in proteins such as tubulins. In contrast, it is not able to act as a long-chain deglutamylase that shortens long polyglutamate chains.::Danio rerio (taxid: 7955) confident COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.59::307-576 PF00246::Peptidase_M14 99.93::414-578 GO:0035611::protein branching point deglutamylation confident hh_4a37_A_1::284-315,321-348,351-376,379-379,382-384,387-392,395-423,425-426,437-461,487-578 very confident psy7350 315 Q5RFD6::Carboxypeptidase M ::Specifically removes C-terminal basic residues (Arg or Lys) from peptides and proteins. It is believed to play important roles in the control of peptide hormone and growth factor activity at the cell surface, and in the membrane-localized degradation of extracellular proteins.::Pongo abelii (taxid: 9601) portable COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.35::1-109 PF00246::Peptidase_M14 100.00::1-307 GO:0042221::response to chemical stimulus confident hh_3mn8_A_1::1-158,212-246,250-310 very confident psy13505 167 Q2TZK2::Putative metallocarboxypeptidase ecm14 ::Probable carboxypeptidase that may be involved in cell wall organization and biogenesis.::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) portable COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.22::79-163 PF00246::Peptidase_M14 99.94::65-163 GO:0043226::organelle confident hh_2c1c_A_1::56-163 very confident psy8322 651 no hit no match COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 99.30::19-164 PF00246::Peptidase_M14 100.00::34-220 GO:0044446::intracellular organelle part confident no hit no match psy7679 608 Q9JHW1::Carboxypeptidase D ::::Rattus norvegicus (taxid: 10116) portable COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 98.14::141-271 PF00246::Peptidase_M14 100.00::127-418 GO:0051384::response to glucocorticoid stimulus confident hh_2nsm_A_1::117-184,199-202,213-232,236-356,361-492,494-499,501-510,520-527 very confident psy17408 96 Q9JHW1::Carboxypeptidase D ::::Rattus norvegicus (taxid: 10116) confident COG2866::Predicted carboxypeptidase [Amino acid transport and metabolism] 92.77::26-41 PF00246::Peptidase_M14 99.86::5-95 GO:0051384::response to glucocorticoid stimulus confident hh_3mn8_A_1::5-47,51-96 very confident psy15938 209 Q567E6::Coenzyme Q-binding protein COQ10 homolog B, mitochondrial ::Required for the function of coenzyme Q in the respiratory chain. May serve as a chaperone or may be involved in the transport of Q6 from its site of synthesis to the catalytic sites of the respiratory complexes.::Danio rerio (taxid: 7955) confident COG2867::Oligoketide cyclase/lipid transport protein [Lipid metabolism] 100.00::44-190 PF03364::Polyketide_cyc 99.91::53-181 GO:0005739::mitochondrion confident hh_1t17_A_1::44-124,126-140,145-190 very confident psy12707 245 Q46AR9::Alanyl-tRNA editing protein AlaX-M ::Functions in trans to edit the amino acid moiety from incorrectly charged Ser-tRNA(Ala) or Gly-tRNA(Ala). Has no activity on incorrectly charged Ser-tRNA(Thr), nor on correctly charged Ala-tRNA(Ala) or Ser-tRNA(Ser).::Methanosarcina barkeri (strain Fusaro / DSM 804) (taxid: 269797) confident COG2872::Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only] 100.00::3-242 PF07973::tRNA_SAD 99.64::188-233 GO:0002161::aminoacyl-tRNA editing activity confident hh_2zze_A_1::3-22,30-136,138-220,224-238 very confident psy12853 137 Q9P3U4::Uncharacterized RING finger protein C328.02 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG2888::Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis] 94.85::48-104 PF01485::IBR 99.24::32-88 GO:0005634::nucleus confident hh_1wd2_A_1::91-135 very confident psy7093 322 Q921L7::HemK methyltransferase family member 1 ::N5-glutamine methyltransferase responsible for the methylation of the GGQ triplet of the mitochondrial translation release factor MTRF1L.::Mus musculus (taxid: 10090) confident COG2890::HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] 100.00::24-321 PF05175::MTS 99.91::107-283 GO:0005739::mitochondrion confident hh_2b3t_A_1::24-37,40-65,68-134,136-136,139-189,191-199,205-208,213-231,233-295,300-320 very confident psy477 60 Q9Y5N5::HemK methyltransferase family member 2 ::Heterodimeric methyltransferase that catalyzes N5-methylation of ETF1 on 'Gln-185', using S-adenosyl L-methionine as methyl donor. ETF1 needs to be complexed to ERF3 in its GTP-bound form to be efficiently methylated. May play a role in the modulation of arsenic-induced toxicity. May be involved in the conversion of monomethylarsonous acid (3+) into the less toxic dimethylarsonic acid.::Homo sapiens (taxid: 9606) portable COG2890::HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis] 93.57::2-55 PF05175::MTS 93.29::2-41 GO:0043234::protein complex confident hh_3q87_B_1::6-56 confident psy11347 294 Q9VJI9::Cytosolic Fe-S cluster assembly factor NUBP1 homolog ::Component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for maturation of extramitochondrial Fe/S proteins. May bind and transfer 2 labile 4Fe-4S clusters to target apoproteins.::Drosophila melanogaster (taxid: 7227) very confident COG2894::MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] 100.00::46-294 PF06564::YhjQ 99.96::47-294 GO:0005829::cytosol very confident hh_2ph1_A_1::36-73,76-158,160-181,185-241,244-280 very confident psy5052 172 Q1JQD7::Molybdenum cofactor biosynthesis protein 1 ::Isoform MOCS1A and isoform MOCS1B probably form a complex that catalyzes the conversion of a guanosine derivative to precursor Z during molybdenum cofactor biosynthesis.::Bos taurus (taxid: 9913) confident COG2896::MoaA Molybdenum cofactor biosynthesis enzyme [Coenzyme metabolism] 100.00::1-172 PF06463::Mob_synth_C 99.94::75-172 GO:0044464::cell part confident hh_1tv8_A_1::1-45,47-110,112-172 very confident psy18174 144 Q9VVW5::Dual specificity protein phosphatase Mpk3 ::Negatively regulates the activity of members of the MAP kinase family in response to changes in the cellular environment. Has a specificity for the ERK family. Acts as negative regulator in a variety of developmental processes including cell differentiation and proliferation controlled by the Ras/ERK pathway. Suppresses the photoreceptor cell differentiation and wing vein formation. Required for proper oogenesis and early embryogenesis. Functions autonomously in a subset of photoreceptor progenitor cells in eye imaginal disks. Appears also to be required in surrounding non-neuronal cells for ommatidial patterning and photoreceptor differentiation. Plays a role in the maintenance of epithelial integrity during tracheal development.::Drosophila melanogaster (taxid: 7227) confident COG2897::SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism] 99.67::13-142 PF00581::Rhodanese 99.56::18-141 GO:0005737::cytoplasm confident hh_3tg1_B_1::14-87,89-102,109-110,113-141 very confident psy18137 320 P10644::cAMP-dependent protein kinase type I-alpha regulatory subunit ::Regulatory subunit of the cAMP-dependent protein kinases involved in cAMP signaling in cells.::Homo sapiens (taxid: 9606) very confident COG2905::Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] 99.56::66-193 PF00027::cNMP_binding 99.64::213-303 GO:0005829::cytosol very confident hh_4din_B_1::14-320 very confident psy9025 361 Q28181::Cyclic nucleotide-gated cation channel beta-1 ::Subunit of cyclic nucleotide-gated (CNG) channels, nonselective cation channels, which play important roles in both visual and olfactory signal transduction. When associated with CNGA1, it is involved in the regulation of ion flow into the rod photoreceptor outer segment (ROS), in response to light-induced alteration of the levels of intracellular cGMP.::Bos taurus (taxid: 9913) confident COG2905::Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] 99.86::113-355 PF00027::cNMP_binding 99.60::141-229 GO:0043204::perikaryon confident hh_3ukn_A_1::30-42,53-80,88-118,120-193,197-243 very confident psy1122 150 Q90805::Cyclic nucleotide-gated channel cone photoreceptor subunit alpha ::Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cyclic GMP which leads to an opening of the cation channel and thereby causing a depolarization of cone photoreceptors.::Gallus gallus (taxid: 9031) portable COG2905::Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] 99.83::3-140 PF00027::cNMP_binding 99.80::30-118 GO:0043204::perikaryon confident hh_3ukn_A_1::6-60,62-83,87-127 very confident psy17883 195 Q920E3::Potassium voltage-gated channel subfamily H member 5 ::Pore-forming (alpha) subunit of voltage-gated potassium channel. Elicits a non-inactivating outward rectifying current (By similarity). Channel properties may be modulated by cAMP and subunit assembly.::Mus musculus (taxid: 10090) confident COG2905::Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] 98.30::125-193 PF07885::Ion_trans_2 99.29::2-55 GO:0007629::flight behavior confident hh_3ukn_A_1::52-128,130-195 very confident psy719 45 P31321::cAMP-dependent protein kinase type I-beta regulatory subunit ::Regulatory subunit of the cAMP-dependent protein kinases involved in cAMP signaling in cells.::Homo sapiens (taxid: 9606) confident COG2905::Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms] 96.24::11-45 no hit no match GO:0045859::regulation of protein kinase activity confident hh_4din_B_1::4-45 very confident psy14488 368 P57620::Exodeoxyribonuclease I ::Also functions as a DNA deoxyribophosphodiesterase that release deoxyribose-phosphate moieties following the cleavage DNA at an apurinic/apyrimidinic (AP) site by either an AP endonuclease AP lyase.::Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (taxid: 107806) confident COG2925::SbcB Exonuclease I [DNA replication, recombination, and repair] 100.00::1-365 PF08411::Exonuc_X-T_C 100.00::98-364 GO:0006308::DNA catabolic process confident hh_2qxf_A_1::2-193,195-221,225-324,330-365 very confident psy2882 1428 P57620::Exodeoxyribonuclease I ::Also functions as a DNA deoxyribophosphodiesterase that release deoxyribose-phosphate moieties following the cleavage DNA at an apurinic/apyrimidinic (AP) site by either an AP endonuclease AP lyase.::Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (taxid: 107806) portable COG2925::SbcB Exonuclease I [DNA replication, recombination, and repair] 100.00::310-779 PF08411::Exonuc_X-T_C 100.00::514-779 GO:0044464::cell part confident hh_3bbo_J_1::158-167,171-291,294-311 very confident psy15309 258 Q7MZB7::Glycerol-3-phosphate acyltransferase ::::Photorhabdus luminescens subsp. laumondii (strain TT01) (taxid: 243265) portable COG2937::PlsB Glycerol-3-phosphate O-acyltransferase [Lipid metabolism] 100.00::49-257 PF01553::Acyltransferase 99.79::138-257 GO:0003824::catalytic activity confident hh_1iuq_A_1::117-130,133-138,141-179,181-198,200-226,228-233,235-256 confident psy6101 341 Q8C6I2::Succinate dehydrogenase assembly factor 2, mitochondrial ::Required for insertion of FAD cofactor into SDHA, the catalytic subunit of succinate dehydrogenase (SDH). SDH is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). In is unclear whether it participates in the chemistry of FAD attachment (enzymatic function) or acts as a chaperone that maintains SDHA in a conformation that is susceptible to autocatalytic FAD attachment.::Mus musculus (taxid: 10090) confident COG2938::Uncharacterized conserved protein [Function unknown] 99.94::234-325 PF03937::Sdh5 99.91::244-319 GO:0018293::protein-FAD linkage confident hh_2lm4_A_1::234-289,292-328 very confident psy6387 483 Q5RFE4::Probable serine carboxypeptidase CPVL ::May be involved in the digestion of phagocytosed particles in the lysosome, participation in an inflammatory protease cascade, and trimming of peptides for antigen presentation.::Pongo abelii (taxid: 9601) confident COG2939::Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] 100.00::68-481 PF00450::Peptidase_S10 100.00::67-481 GO:0005615::extracellular space confident hh_1gxs_A_1::58-76,81-101,103-138,144-213,216-231,235-235,237-283 very confident psy3706 443 Q5RFE4::Probable serine carboxypeptidase CPVL ::May be involved in the digestion of phagocytosed particles in the lysosome, participation in an inflammatory protease cascade, and trimming of peptides for antigen presentation.::Pongo abelii (taxid: 9601) confident COG2939::Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism] 100.00::73-425 PF00450::Peptidase_S10 100.00::73-424 GO:0005773::vacuole confident hh_1gxs_A_1::62-83,88-142,148-217,220-236,238-285 very confident psy7758 235 no hit no match COG2940::Proteins containing SET domain [General function prediction only] 99.74::24-168 PF00856::SET 99.75::39-145 GO:0003714::transcription corepressor activity confident hh_3ooi_A_1::2-152,154-169 very confident psy5735 247 Q7XJS0::Histone-lysine N-methyltransferase ASHR1 ::Histone methyltransferase.::Arabidopsis thaliana (taxid: 3702) portable COG2940::Proteins containing SET domain [General function prediction only] 98.10::49-120 PF00856::SET 99.46::38-89 GO:0005737::cytoplasm confident hh_3n71_A_1::8-30,37-92,95-124,131-137,142-142,160-160,165-236 very confident psy5736 346 Q7XJS0::Histone-lysine N-methyltransferase ASHR1 ::Histone methyltransferase.::Arabidopsis thaliana (taxid: 3702) portable COG2940::Proteins containing SET domain [General function prediction only] 97.98::143-215 PF00856::SET 99.39::135-184 GO:0005737::cytoplasm confident hh_3qwp_A_1::18-94,101-121,133-185,188-219,224-224,240-245,253-257,269-273,281-335 very confident psy8426 278 Q29RP8::Histone-lysine N-methyltransferase SUV420H1 ::Histone methyltransferase that specifically trimethylates 'Lys-20' of histone H4. H4 'Lys-20' trimethylation represents a specific tag for epigenetic transcriptional repression. Mainly functions in pericentric heterochromatin regions, thereby playing a central role in the establishment of constitutive heterochromatin in these regions. SUV420H1 is targeted to histone H3 via its interaction with RB1 family proteins (RB1, RBL1 and RBL2).::Bos taurus (taxid: 9913) confident COG2940::Proteins containing SET domain [General function prediction only] 99.39::77-198 PF00856::SET 99.63::131-178 GO:0034773::histone H4-K20 trimethylation confident hh_3s8p_A_1::1-18,22-34,41-76,78-204 very confident psy14480 190 P38890::Putative protein lysine methyltransferase SET5 ::Putative protein lysine methyltransferase that acts as a virus host factor involved in the replication of positive-strand RNA viruses like the MBV.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG2940::Proteins containing SET domain [General function prediction only] 98.44::105-176 PF00856::SET 99.55::97-147 GO:0044424::intracellular part confident hh_3n71_A_1::11-50,52-185 very confident psy13861 1048 Q61188::Histone-lysine N-methyltransferase EZH2 ::Polycomb group (PcG) protein. Catalytic subunit of the PRC2/EED-EZH2 complex, which methylates (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. Able to mono-, di- and trimethylate 'Lys-27' of histone H3 to form H3K27me1, H3K27me2 and H3K27me3, respectively. Compared to EZH2-containing complexes, it is more abundant in embryonic stem cells and plays a major role in forming H3K27me3, which is required for embryonic stem cell identity and proper differentiation. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXA7, HOXB6 and HOXC8. EZH2 can also methylate non-histone proteins such as the transcription factor GATA4.::Mus musculus (taxid: 10090) confident COG2940::Proteins containing SET domain [General function prediction only] 99.47::469-599 PF00856::SET 99.49::473-577 GO:0045120::pronucleus confident hh_3hna_A_1::470-506,513-597 very confident psy8096 118 P55200::Histone-lysine N-methyltransferase MLL ::Histone methyltransferase that plays an essential role in early development and hematopoiesis. Catalytic subunit of the MLL1/MLL complex, a multiprotein complex that mediates both methylation of 'Lys-4' of histone H3 (H3K4me) complex and acetylation of 'Lys-16' of histone H4 (H4K16ac). In the MLL1/MLL complex, it specifically mediates H3K4me, a specific tag for epigenetic transcriptional activation. Has weak methyltransferase activity by itself, and requires other component of the MLL1/MLL complex to obtain full methyltransferase activity. Has no activity toward histone H3 phosphorylated on 'Thr-3', less activity toward H3 dimethylated on 'Arg-8' or 'Lys-9', while it has higher activity toward H3 acetylated on 'Lys-9'. Required for transcriptional activation of HOXA9. Promotes PPP1R15A-induced apoptosis.::Mus musculus (taxid: 10090) confident COG2940::Proteins containing SET domain [General function prediction only] 99.78::1-118 PF00856::SET 99.67::42-97 GO:0070577::histone acetyl-lysine binding confident hh_2w5y_A_1::1-117 very confident psy6242 541 Q7XJS0::Histone-lysine N-methyltransferase ASHR1 ::Histone methyltransferase.::Arabidopsis thaliana (taxid: 3702) portable COG2940::Proteins containing SET domain [General function prediction only] 95.84::252-317 PF01753::zf-MYND 99.02::15-51 GO:0005634::nucleus confident hh_3n71_A_1::55-107,112-133,135-149,156-191,193-194,196-209,211-212,217-218,220-326,328-328,331-331,337-337,360-429,433-447 very confident psy7969 502 Q32PH7::Histone-lysine N-methyltransferase SUV39H2 ::Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3 using monomethylated H3 'Lys-9' as substrate. H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in heterochromatin regions, thereby playing a central role in the establishment of constitutive heterochromatin at pericentric and telomere regions. H3 'Lys-9' trimethylation is also required to direct DNA methylation at pericentric repeats. SUV39H1 is targeted to histone H3 via its interaction with RB1 and is involved in many processes, such as cell cycle regulation, transcriptional repression and regulation of telomere length. May participate in regulation of higher order chromatin organization during spermatogenesis.::Bos taurus (taxid: 9913) portable COG2940::Proteins containing SET domain [General function prediction only] 99.67::317-499 PF05033::Pre-SET 99.78::234-331 GO:0000785::chromatin confident hh_2r3a_A_1::213-232,234-282,284-288,290-395,409-499 very confident psy14657 605 Q32PH7::Histone-lysine N-methyltransferase SUV39H2 ::Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3 using monomethylated H3 'Lys-9' as substrate. H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in heterochromatin regions, thereby playing a central role in the establishment of constitutive heterochromatin at pericentric and telomere regions. H3 'Lys-9' trimethylation is also required to direct DNA methylation at pericentric repeats. SUV39H1 is targeted to histone H3 via its interaction with RB1 and is involved in many processes, such as cell cycle regulation, transcriptional repression and regulation of telomere length. May participate in regulation of higher order chromatin organization during spermatogenesis.::Bos taurus (taxid: 9913) confident COG2940::Proteins containing SET domain [General function prediction only] 99.56::430-603 PF05033::Pre-SET 99.79::84-181 GO:0043234::protein complex confident hh_2r3a_A_1::312-324,327-392,394-399,402-416,418-508,513-602 very confident psy8081 463 Q15047::Histone-lysine N-methyltransferase SETDB1 ::Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3. H3 'Lys-9' trimethylation represents a specific tag for epigenetic transcriptional repression by recruiting HP1 (CBX1, CBX3 and/or CBX5) proteins to methylated histones. Mainly functions in euchromatin regions, thereby playing a central role in the silencing of euchromatic genes. H3 'Lys-9' trimethylation is coordinated with DNA methylation. Probably forms a complex with MBD1 and ATF7IP that represses transcription and couples DNA methylation and histone 'Lys-9' trimethylation. Its activity is dependent on MBD1 and is heritably maintained through DNA replication by being recruited by CAF-1. SETDB1 is targeted to histone H3 by TRIM28/TIF1B, a factor recruited by KRAB zinc-finger proteins.::Homo sapiens (taxid: 9606) portable COG2940::Proteins containing SET domain [General function prediction only] 99.63::178-462 PF05033::Pre-SET 99.85::80-194 GO:0044446::intracellular organelle part confident hh_3hna_A_1::71-136,138-148,150-153,156-156,163-245,249-258,375-461 very confident psy9570 218 Q54VB3::Ubiquinone biosynthesis protein COQ7 homolog ::Potential central metabolic regulator.::Dictyostelium discoideum (taxid: 44689) very confident COG2941::CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzyme metabolism] 100.00::4-218 PF03232::COQ7 100.00::26-194 GO:0000975::regulatory region DNA binding very confident hh_2fzf_A_1::27-88,90-95,98-136,139-139,143-163 confident psy6685 199 Q63619::Ubiquinone biosynthesis protein COQ7 homolog (Fragment) ::Involved in lifespan determination in ubiquinone-independent manner. Involved in ubiquinone biosynthesis. Potential central metabolic regulator.::Rattus norvegicus (taxid: 10116) very confident COG2941::CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzyme metabolism] 100.00::24-199 PF03232::COQ7 100.00::31-199 GO:0000975::regulatory region DNA binding very confident hh_2fzf_A_1::32-93,95-100,103-140,143-144,148-168 confident psy6686 131 Q63619::Ubiquinone biosynthesis protein COQ7 homolog (Fragment) ::Involved in lifespan determination in ubiquinone-independent manner. Involved in ubiquinone biosynthesis. Potential central metabolic regulator.::Rattus norvegicus (taxid: 10116) confident COG2941::CAT5 Ubiquinone biosynthesis protein COQ7 [Coenzyme metabolism] 100.00::1-131 PF03232::COQ7 100.00::1-131 GO:0001306::age-dependent response to oxidative stress confident hh_1vjx_A_1::1-34,40-71,77-99 confident psy8160 324 O15550::Lysine-specific demethylase 6A ::Histone demethylase that specifically demethylates 'Lys-27' of histone H3, thereby playing a central role in histone code. Demethylates trimethylated and dimethylated but not monomethylated H3 'Lys-27'. Plays a central role in regulation of posterior development, by regulating HOX gene expression. Demethylation of 'Lys-27' of histone H3 is concomitant with methylation of 'Lys-4' of histone H3, and regulates the recruitment of the PRC1 complex and monoubiquitination of histone H2A.::Homo sapiens (taxid: 9606) confident COG2956::Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] 99.86::25-302 PF13429::TPR_15 99.89::54-321 GO:0005705::polytene chromosome interband confident hh_2y4t_A_1::5-46,50-152,155-157,160-172,180-250,252-277,280-306,308-321 very confident psy12713 551 O94826::Mitochondrial import receptor subunit TOM70 ::Receptor that accelerates the import of all mitochondrial precursor proteins.::Homo sapiens (taxid: 9606) confident COG2956::Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] 99.86::61-354 PF13429::TPR_15 99.91::63-343 GO:0005739::mitochondrion confident hh_1w3b_A_2::60-93,97-131,136-150,152-218,225-291,293-359,383-397,432-437,449-498 very confident psy10738 609 Q8VDU0::G-protein-signaling modulator 2 ::Plays an important role in spindle pole orientation (By similarity). Interacts and contributes to the functional activity of G(i) alpha proteins. Acts to stabilize the apical complex during neuroblast divisions.::Mus musculus (taxid: 10090) very confident COG2956::Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] 99.65::18-348 PF13429::TPR_15 99.70::28-350 GO:0005938::cell cortex confident hh_3sf4_A_1::19-385,390-401,403-424 very confident psy12373 198 Q3UGF1::WD repeat-containing protein 19 ::May be involved in cilia function and/or assembly.::Mus musculus (taxid: 10090) portable COG2956::Predicted N-acetylglucosaminyl transferase [Carbohydrate transport and metabolism] 98.40::50-180 PF14938::SNAP 98.97::7-180 GO:0031513::nonmotile primary cilium confident hh_1qqe_A_1::8-32,39-74,81-85,87-92 confident psy648 72 Q6IQ86::Probable protein BRICK1 ::Involved in regulation of actin and microtubule organization. Part of a WAVE complex that activates the Arp2/3 complex.::Danio rerio (taxid: 7955) very confident COG2960::Uncharacterized protein conserved in bacteria [Function unknown] 94.36::4-71 PF10152::DUF2360 99.80::26-71 GO:0005856::cytoskeleton very confident hh_3p8c_E_1::1-3,5-72 very confident psy3671 266 Q91VA6::Polymerase delta-interacting protein 2 ::::Mus musculus (taxid: 10090) very confident COG2967::ApaG Uncharacterized protein affecting Mg2+/Co2+ transport [Inorganic ion transport and metabolism] 100.00::171-266 PF04379::DUF525 99.98::186-266 GO:0042645::mitochondrial nucleoid very confident hh_1xq4_A_1::170-248,250-266 very confident psy1741 333 Q08DE5::Etoposide-induced protein 2.4 homolog ::::Bos taurus (taxid: 9913) confident COG2981::CysZ Uncharacterized protein involved in cysteine biosynthesis [Amino acid transport and metabolism] 97.52::78-279 PF07264::EI24 99.92::79-272 GO:0030308::negative regulation of cell growth confident hh_3tx3_A_1::78-118,123-124,129-211,214-272 confident psy18072 174 P68102::Eukaryotic translation initiation factor 2 subunit 1 ::Functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.::Bos taurus (taxid: 9913) confident COG2996::Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only] 99.85::15-141 PF00575::S1 99.51::14-85 GO:0005829::cytosol confident hh_1kl9_A_1::1-88 very confident psy2044 452 Q5MPP0::Fatty acid 2-hydroxylase ::Required for alpha-hydroxylation of free fatty acids and the formation of alpha-hydroxylated sphingolipids.::Mus musculus (taxid: 10090) portable COG3000::ERG3 Sterol desaturase [Lipid metabolism] 99.56::295-443 PF00173::Cyt-b5 99.36::38-110 GO:0043231::intracellular membrane-bounded organelle confident hh_1hko_A_1::36-114 very confident psy5295 248 A6QLM0::Transmembrane protein 189 ::::Bos taurus (taxid: 9913) very confident COG3000::ERG3 Sterol desaturase [Lipid metabolism] 94.62::186-217 PF10520::Kua-UEV1_localn 100.00::47-241 GO:0016021::integral to membrane confident no hit no match psy13666 278 P75820::N-acetylmuramoyl-L-alanine amidase AmiD ::::Escherichia coli (strain K12) (taxid: 83333) portable COG3023::ampD N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane] 100.00::26-274 PF01510::Amidase_2 99.96::29-174 GO:0019867::outer membrane confident hh_3d2y_A_1::26-55,60-123,125-184,186-196,199-205,210-231,233-248,253-277 very confident psy12445 150 P37153::Apolipoprotein D ::APOD occurs in the macromolecular complex with lecithin-transport and binding of bilin. Appears to be able to transport a variety of ligands in a number of different contexts.::Oryctolagus cuniculus (taxid: 9986) portable COG3040::Blc Bacterial lipocalin [Cell envelope biogenesis, outer membrane] 99.80::69-147 PF08212::Lipocalin_2 99.84::69-147 GO:0005622::intracellular confident hh_2hzq_A_1::61-90,92-114,116-144 very confident psy11333 482 Q2M0J9::Kelch-like protein diablo ::Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.64::260-479 PF00651::BTB 99.76::28-134 GO:0005794::Golgi apparatus very confident hh_1zgk_A_2::261-267,272-283,285-365,367-475 very confident psy10286 748 O94889::Kelch-like protein 18 ::::Homo sapiens (taxid: 9606) confident COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.76::474-718 PF00651::BTB 99.76::65-205 GO:0031463::Cul3-RING ubiquitin ligase complex confident hh_2vpj_A_1::474-743 very confident psy1098 390 Q9V4C8::Host cell factor ::May be involved in control of cell cycle.::Drosophila melanogaster (taxid: 7227) confident COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.83::23-339 PF03089::RAG2 99.35::88-330 GO:0048188::Set1C/COMPASS complex confident hh_2woz_A_2::26-33,37-45,52-69,72-121,129-155,165-177,181-186,190-204,210-239,243-272,286-305,312-357 very confident psy17309 824 Q2M0J9::Kelch-like protein diablo ::Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.77::492-758 PF07707::BACK 99.65::309-411 GO:0005856::cytoskeleton confident hh_4asc_A_1::460-467,475-489,491-727,730-750 very confident psy8877 180 Q9BQ90::Kelch domain-containing protein 3 ::May be involved in meiotic recombination process.::Homo sapiens (taxid: 9606) portable COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.63::5-179 PF13964::Kelch_6 99.48::50-110 GO:0005737::cytoplasm confident hh_3ii7_A_1::1-32,34-72,81-101,105-154,158-180 very confident psy14436 133 Q2M0J9::Kelch-like protein diablo ::Probable substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. May have a role in synapse differentiation and growth.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.07::16-111 PF13964::Kelch_6 99.65::37-85 GO:0005794::Golgi apparatus confident hh_3ii7_A_1::3-132 very confident psy2980 92 Q684M4::Kelch-like ECH-associated protein 1 ::Retains NFE2L2/NRF2 in the cytosol. Functions as substrate adapter protein for the E3 ubiquitin ligase complex formed by CUL3 and RBX1. Targets NFE2L2/NRF2 for ubiquitination and degradation by the proteasome, thus resulting in the suppression of its transcriptional activity and the repression of antioxidant response element-mediated detoxifying enzyme gene expression. May also retain BPTF in the cytosol. Targets PGAM5 for ubiquitination and degradation by the proteasome.::Sus scrofa (taxid: 9823) portable COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 98.92::1-90 PF13964::Kelch_6 99.74::34-83 GO:0005829::cytosol confident hh_3ii7_A_1::1-6,9-92 very confident psy14331 265 Q921I2::Kelch domain-containing protein 4 ::::Mus musculus (taxid: 10090) confident COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.52::41-237 PF13964::Kelch_6 99.30::159-214 GO:0005829::cytosol confident hh_4asc_A_1::24-39,41-56,59-74,81-110,114-127,133-154,157-181,186-206,210-222,224-263 very confident psy2979 400 F1LZ52::Kelch-like protein 3 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a regulator of ion transport in the distal nephron. The BCR(KLHL3) complex may act by mediating ubiquitination of SLC12A3/NCC, thereby regulating SLC12A3/NCC subcellular location at the cell membrane.::Rattus norvegicus (taxid: 10116) portable COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.85::139-399 PF13964::Kelch_6 99.38::332-381 GO:0005856::cytoskeleton confident hh_4asc_A_1::108-117,125-139,141-158,160-255,258-308,310-374,377-398 very confident psy11470 114 no hit no match COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 98.76::10-94 PF13964::Kelch_6 99.59::22-77 GO:0005856::cytoskeleton confident hh_1zgk_A_1::2-58,66-113 very confident psy9754 306 Q9C0H6::Kelch-like protein 4 ::::Homo sapiens (taxid: 9606) portable COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.88::3-278 PF13964::Kelch_6 99.41::88-136 GO:0031463::Cul3-RING ubiquitin ligase complex confident hh_4asc_A_1::5-14,21-33,35-60,62-159,162-179,181-196,198-210,219-285,289-302 very confident psy11771 347 Q6TDP4::Kelch-like protein 17 ::Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex. The BCR(KLHL17) mediates the ubiquitination and subsequenct degradation of GLUR6. May play a role in the actin-based neuronal function.::Homo sapiens (taxid: 9606) portable COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 99.65::137-334 PF13964::Kelch_6 99.40::273-321 GO:0032947::protein complex scaffold confident hh_4asc_A_1::132-314,317-332 very confident psy6079 79 Q9C0H6::Kelch-like protein 4 ::::Homo sapiens (taxid: 9606) confident COG3055::Uncharacterized protein conserved in bacteria [Function unknown] 98.82::10-78 PF13964::Kelch_6 99.79::19-69 GO:0043025::neuronal cell body confident rp_1zgk_A_1::22-29,32-78 very confident psy3174 265 Q60445::Coatomer subunit epsilon ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors.::Cricetulus griseus (taxid: 10029) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.28::94-243 PF04733::Coatomer_E 100.00::9-241 GO:0005794::Golgi apparatus confident hh_3mkr_A_1::10-243 very confident psy3224 1278 Q91YR7::Pre-mRNA-processing factor 6 ::Involved in pre-mRNA splicing. May act in the tri-snRNP complex as a bridging factor between U5 and U4/U6 snRNPs in the late step of spliceosome assembly. May be necessary for tri-snRNP formation (By similarity). Enhances dihydrotestosterone-induced transactivation activity of AR, as well as dexamethasone-induced transactivation activity of NR3C1, but does not affect estrogen-induced transactivation.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.66::861-1105 PF06424::PRP1_N 100.00::70-214 GO:0071013::catalytic step 2 spliceosome confident hh_2xpi_A_1::708-741,746-775,777-805,809-921,928-929,931-1134,1171-1256 very confident psy17306 904 Q9P6I2::Cys-Gly metallodipeptidase dug1 ::Catalytic component of the GSH degradosomal complex involved in the degradation of glutathione (GSH) and other peptides containing a gamma-glu-X bond. Has a Gly-Cys dipeptidase activity.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.83::3-270 PF09110::HAND 100.00::805-903 GO:0005840::ribosome confident hh_1ofc_X_1::796-903 very confident psy597 546 Q5R581::Kinesin light chain 1 ::Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. The light chain may function in coupling of cargo to the heavy chain or in the modulation of its ATPase activity.::Pongo abelii (taxid: 9601) very confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.74::212-532 PF09311::Rab5-bind 99.88::77-249 GO:0005829::cytosol confident hh_3nf1_A_1::204-249,286-485,494-531 very confident psy11025 535 Q96DF8::Protein DGCR14 ::May be involved in pre-mRNA splicing.::Homo sapiens (taxid: 9606) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 96.44::317-533 PF09751::Es2 100.00::31-317 GO:0005634::nucleus confident hh_2ifu_A_1::317-404,406-460,484-533 very confident psy6603 724 O74985::N-terminal acetyltransferase A complex subunit nat1 ::Non-catalytic component of the NatA N-terminal acetyltransferase, which catalyzes acetylation of proteins beginning with Met-Ser, Met-Gly and Met-Ala. N-acetylation plays a role in normal eukaryotic translation and processing, protect against proteolytic degradation and protein turnover. nat1 anchors ard1 and nat5 to the ribosome and may present the N termini of nascent polypeptides for acetylation.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.86::352-626 PF12569::NARP1 100.00::169-719 GO:0072686::mitotic spindle confident hh_2y4t_A_1::8-20,23-141,171-243,360-400,423-456,519-605 very confident psy875 480 Q54KA7::Ankyrin repeat, PH and SEC7 domain containing protein secG ::::Dictyostelium discoideum (taxid: 44689) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.76::32-259 PF12796::Ank_2 99.76::389-480 GO:0050790::regulation of catalytic activity confident hh_1n0r_A_1::335-366,383-445,448-478 very confident psy5660 337 Q5EA11::Tetratricopeptide repeat protein 4 ::::Bos taurus (taxid: 9913) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.10::36-141 PF13414::TPR_11 99.32::41-110 GO:0005634::nucleus confident hh_2vyi_A_1::36-73,78-158 very confident psy8498 90 Q8R349::Cell division cycle protein 16 homolog ::Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.32::4-88 PF13414::TPR_11 99.61::3-74 GO:0005876::spindle microtubule confident bp_3hym_B_1::16-83 very confident psy11461 253 Q9SRS9::E3 ubiquitin-protein ligase CHIP ::Has E3 ubiquitin-protein ligase activity and may target misfolded substrates towards proteasomal degradation. Regulates the activity of some serine/threonine-protein phosphatases by E3 ubiquitin-protein ligase activity. Required for responses to biotic and abiotic stresses such as auxin, abscisic acid (ABA), low and high temperature and darkness, probably through the activation of serine/threonine-protein phosphatase and the subsequent modification of the plasma membrane composition. Regulates the chloroplastic Clp proteolytic activity in response to stresses. Ubiquitylates FtsH1, a component of the chloroplast FtsH protease, and affects protein degradation in chloroplasts. Mediates plastid precursor degradation to prevent cytosolic precursor accumulation, together with the molecular chaperone HSC70-4. Mediates ubiquitination of transit peptides and thereby led to their degradation through the ubiquitin-proteasome system.::Arabidopsis thaliana (taxid: 3702) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.51::12-156 PF13414::TPR_11 99.47::13-79 GO:0031398::positive regulation of protein ubiquitination confident hh_2c2l_A_1::11-176,178-253 very confident psy4703 401 D7REX8::Protein unc-45 homolog B ::Acts as a co-chaperone for HSP90 and is required for proper folding of the myosin motor domain (By similarity). Plays a role in sarcomere formation during muscle cell development.::Xenopus tropicalis (taxid: 8364) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.33::8-172 PF13414::TPR_11 99.29::46-112 GO:0043229::intracellular organelle confident hh_3now_A_1::209-317,319-327,329-353,356-356,360-385 very confident psy14212 111 Q15006::ER membrane protein complex subunit 2 ::::Homo sapiens (taxid: 9606) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 97.33::1-60 PF13414::TPR_11 97.88::11-63 GO:0043234::protein complex confident hh_2l6j_A_1::2-26,30-62 confident psy13481 231 Q5ZLF0::Hsc70-interacting protein ::One HIP oligomer binds the ATPase domains of at least two HSC70 molecules dependent on activation of the HSC70 ATPase by HSP40. Stabilizes the ADP state of HSC70 that has a high affinity for substrate protein. Through its own chaperone activity, it may contribute to the interaction of HSC70 with various target proteins.::Gallus gallus (taxid: 9031) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.43::111-210 PF13414::TPR_11 99.49::146-212 GO:0043234::protein complex confident hh_3fp2_A_1::108-205,207-214 very confident psy11688 546 Q60676::Serine/threonine-protein phosphatase 5 ::May play a role in the regulation of RNA biogenesis and/or mitosis.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.41::29-152 PF13414::TPR_11 99.20::68-133 GO:0072686::mitotic spindle confident hh_1wao_1_1::32-442 very confident psy10736 104 Q8VDU0::G-protein-signaling modulator 2 ::Plays an important role in spindle pole orientation (By similarity). Interacts and contributes to the functional activity of G(i) alpha proteins. Acts to stabilize the apical complex during neuroblast divisions.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 98.48::24-94 PF13424::TPR_12 99.74::18-94 GO:0005794::Golgi apparatus confident hh_3ro2_A_1::4-98 very confident psy9209 349 A1A4R8::Cell division cycle protein 23 homolog ::Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.::Bos taurus (taxid: 9913) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.93::111-324 PF13429::TPR_15 99.96::43-318 GO:0000080::G1 phase of mitotic cell cycle confident hh_2fo7_A_1::111-244 very confident psy17788 365 A7MB10::Protein RRP5 homolog ::Essential for the generation of mature 18S rRNA, specifically necessary for cleavages at sites A0, 1 and 2 of the 47S precursor. Directly interacts with U3 snoRNA.::Bos taurus (taxid: 9913) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.77::151-358 PF13429::TPR_15 99.86::89-359 GO:0005634::nucleus confident hh_2uy1_A_2::92-109,111-145,148-214,218-250,252-283,285-320,322-322,325-354 confident psy3701 342 Q8R349::Cell division cycle protein 16 homolog ::Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.92::78-322 PF13429::TPR_15 99.94::36-335 GO:0005680::anaphase-promoting complex confident hh_3hym_B_1::33-215,243-341 very confident psy8682 1956 Q6CT48::Peroxisomal targeting signal receptor ::Binds to the C-terminal PTS1-type tripeptide peroxisomal targeting signal (SKL-type) and plays an essential role in peroxisomal protein import.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.59::1604-1832 PF13429::TPR_15 99.75::1607-1896 GO:0005794::Golgi apparatus confident hh_1fch_A_1::1549-1568,1573-1587,1590-1702,1707-1709,1713-1736,1738-1759,1761-1885,1887-1893 very confident psy12642 201 Q6TGY8::ER membrane protein complex subunit 2 ::::Danio rerio (taxid: 7955) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.87::3-165 PF13429::TPR_15 99.76::6-161 GO:0005794::Golgi apparatus confident hh_1w3b_A_1::7-116,120-160 very confident psy17412 240 O13754::Hsp70/Hsp90 co-chaperone cns1 ::Co-chaperone that binds to the molecular chaperones Hsp90 and Hsp70. Stimulates Hsp70 ATPase activity, but not Hsp90 ATPase activity. Involved in only a subset of Hsp90 functions.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.92::44-228 PF13429::TPR_15 99.83::44-239 GO:0005829::cytosol confident hh_2c2l_A_1::44-169,172-222 very confident psy4130 314 Q80W98::Small glutamine-rich tetratricopeptide repeat-containing protein beta ::Co-chaperone that binds directly to HSC70 and HSP70 and regulates their ATPase activity.::Rattus norvegicus (taxid: 10116) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.75::23-211 PF13429::TPR_15 99.66::26-245 GO:0005829::cytosol confident hh_2vyi_A_1::82-208 very confident psy3020 150 Q9USI5::Heat shock protein sti1 homolog ::May play a role in mediating the heat shock response of some HSP70 genes.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.64::2-148 PF13429::TPR_15 99.35::102-149 GO:0005829::cytosol confident hh_2vyi_A_1::2-44,53-58,61-73,102-149 very confident psy1863 425 Q61371::Intraflagellar transport protein 88 homolog ::Involved in primary cilium biogenesis.::Mus musculus (taxid: 10090) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.85::131-332 PF13429::TPR_15 99.80::139-422 GO:0005932::microtubule basal body confident hh_2fo7_A_1::167-293,295-302 very confident psy16611 341 Q8VD72::Tetratricopeptide repeat protein 8 ::The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the guanosyl exchange factor (GEF) for Rab8 and then the Rab8-GTP localizes to the cilium and promotes docking and fusion of carrier vesicles to the base of the ciliary membrane.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.93::119-330 PF13429::TPR_15 99.87::120-338 GO:0005932::microtubule basal body confident hh_2fo7_A_1::189-220,223-323 very confident psy16588 341 Q8VD72::Tetratricopeptide repeat protein 8 ::The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the guanosyl exchange factor (GEF) for Rab8 and then the Rab8-GTP localizes to the cilium and promotes docking and fusion of carrier vesicles to the base of the ciliary membrane.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.93::119-330 PF13429::TPR_15 99.87::120-338 GO:0005932::microtubule basal body confident hh_2fo7_A_1::189-220,223-323 very confident psy4772 235 P49354::Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha ::Catalyzes the transfer of a farnesyl or geranyl-geranyl moiety from farnesyl or geranyl-geranyl pyrophosphate to a cysteine at the fourth position from the C-terminus of several proteins having the C-terminal sequence Cys-aliphatic-aliphatic-X. The alpha subunit is thought to participate in a stable complex with the substrate. The beta subunit binds the peptide substrate. Through RAC1 prenylation and activation may positively regulate neuromuscular junction development downstream of MUSK.::Homo sapiens (taxid: 9606) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.70::46-227 PF13429::TPR_15 99.75::44-232 GO:0018344::protein geranylgeranylation confident hh_2h6f_A_1::1-84,90-109,111-156,158-225 very confident psy16607 677 Q8VD72::Tetratricopeptide repeat protein 8 ::The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the guanosyl exchange factor (GEF) for Rab8 and then the Rab8-GTP localizes to the cilium and promotes docking and fusion of carrier vesicles to the base of the ciliary membrane.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.79::392-628 PF13429::TPR_15 99.88::361-654 GO:0035264::multicellular organism growth confident hh_1na0_A_1::533-565,568-584,604-674 very confident psy12719 116 Q75Q39::Mitochondrial import receptor subunit TOM70 ::Receptor that accelerates the import of all mitochondrial precursor proteins.::Rattus norvegicus (taxid: 10116) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.82::3-116 PF13429::TPR_15 99.76::4-116 GO:0043231::intracellular membrane-bounded organelle confident hh_1na3_A_1::25-74,76-111 very confident psy1039 206 D7REX8::Protein unc-45 homolog B ::Acts as a co-chaperone for HSP90 and is required for proper folding of the myosin motor domain (By similarity). Plays a role in sarcomere formation during muscle cell development.::Xenopus tropicalis (taxid: 8364) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.72::8-180 PF13429::TPR_15 99.62::7-179 GO:0043234::protein complex confident hh_1elr_A_1::6-39,41-42,46-112,114-130 very confident psy3014 570 O54981::Stress-induced-phosphoprotein 1 ::Mediates the association of the molecular chaperones HSC70 and HSP90 (HSPCA and HSPCB).::Cricetulus griseus (taxid: 10029) very confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.89::243-484 PF13429::TPR_15 99.92::259-474 GO:0043234::protein complex very confident hh_1elw_A_2::10-123 very confident psy13014 229 Q54VG4::Small glutamine-rich tetratricopeptide repeat-containing protein ::May act as a co-chaperone and regulate the ATPase activity of heat shock proteins.::Dictyostelium discoideum (taxid: 44689) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.74::19-202 PF13429::TPR_15 99.66::5-209 GO:0043234::protein complex confident hh_2c2l_A_1::67-101,107-116,123-217 very confident psy9159 259 Q0P4W3::Regulator of microtubule dynamics protein 2 ::::Xenopus tropicalis (taxid: 8364) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.77::32-247 PF13429::TPR_15 99.66::45-241 GO:0044446::intracellular organelle part confident hh_2xpi_A_1::45-82,97-130,141-208,210-253 confident psy11738 323 Q9DCV4::Regulator of microtubule dynamics protein 1 ::::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.77::46-311 PF13429::TPR_15 99.77::15-307 GO:0045335::phagocytic vesicle confident hh_4g1t_A_1::13-110,121-160,171-190,192-233,242-248,251-273,275-308 confident psy12000 507 Q5PR66::Tetratricopeptide repeat protein 26 ::::Danio rerio (taxid: 7955) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.68::7-195 PF13429::TPR_15 99.81::103-455 GO:0072372::primary cilium confident hh_2xpi_A_1::9-39,41-73,101-196,202-202,204-255,263-273,276-353,355-379,389-494 very confident psy16144 122 Q7Z4L5::Tetratricopeptide repeat protein 21B ::May negatively modulate SHH signal transduction and may play a role in retrograde intraflagellar transport in cilia.::Homo sapiens (taxid: 9606) portable COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 98.72::22-107 PF14559::TPR_19 99.03::53-110 GO:0042995::cell projection confident hh_2ho1_A_1::22-66,68-109 confident psy5288 186 Q23983::Soluble NSF attachment protein ::Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Also between the endosome and phagosome.::Drosophila melanogaster (taxid: 7227) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.25::34-185 PF14938::SNAP 100.00::6-186 GO:0019905::syntaxin binding confident hh_1qqe_A_1::6-20,22-27,29-185 very confident psy4339 303 Q92624::Amyloid protein-binding protein 2 ::May play a role in intracellular protein transport. May be involved in the translocation of APP along microtubules toward the cell surface.::Homo sapiens (taxid: 9606) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.73::31-262 PF14938::SNAP 99.61::10-261 GO:0030659::cytoplasmic vesicle membrane confident hh_3edt_B_1::6-44,49-87,98-185,187-262 very confident psy10061 325 Q9CWZ7::Gamma-soluble NSF attachment protein ::Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus.::Mus musculus (taxid: 10090) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.44::54-278 PF14938::SNAP 100.00::33-296 GO:0031201::SNARE complex confident hh_2ifu_A_1::28-152,154-307 very confident psy9376 320 Q23983::Soluble NSF attachment protein ::Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Also between the endosome and phagosome.::Drosophila melanogaster (taxid: 7227) confident COG3063::PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] 99.25::28-223 PF14938::SNAP 100.00::2-280 GO:0070044::synaptobrevin 2-SNAP-25-syntaxin-1a complex very confident hh_1qqe_A_1::2-9,13-282 very confident psy16914 284 no hit no match COG3064::TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] 94.77::164-170 no hit no match GO:0031672::A band confident rp_1i84_S_5::10-105,110-282 portable psy3451 223 no hit no match COG3064::TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] 97.47::2-16 no hit no match GO:0031672::A band confident rp_2dfs_A_1::24-188,194-206 portable psy9584 466 Q9Y6X3::MAU2 chromatid cohesion factor homolog ::Required for association of the cohesin complex with chromatin during interphase. Plays a role in sister chromatid cohesion and normal progression through prometaphase.::Homo sapiens (taxid: 9606) confident COG3071::HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] 96.29::331-427 PF10345::Cohesin_load 100.00::1-434 GO:0000785::chromatin confident hh_3ulq_A_1::32-138,159-172,174-176,179-194,210-213,241-255,262-315,319-321,323-364,366-379,384-436 confident psy767 902 P42704::Leucine-rich PPR motif-containing protein, mitochondrial ::May play a role in RNA metabolism in both nuclei and mitochondria. In the nucleus binds to HNRPA1-associated poly(A) mRNAs and is part of nmRNP complexes at late stages of mRNA maturation which are possibly associated with nuclear mRNA export. May bind mature mRNA in the nucleus outer membrane. In mitochondria binds to poly(A) mRNA. Plays a role in translation or stability of mitochondrially encoded cytochrome c oxidase (COX) subunits. May be involved in transcription regulation. Cooperates with PPARGC1A to regulate certain mitochondrially encoded genes and gluconeogenic genes and may regulate docking of PPARGC1A to transcription factors. Seems to be involved in the transcription regulation of the multidrug-related genes MDR1 and MVP. Part of a nuclear factor that binds to the invMED1 element of MDR1 and MVP gene promoters. Binds single-stranded DNA.::Homo sapiens (taxid: 9606) portable COG3071::HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism] 98.89::87-406 PF13041::PPR_2 99.22::157-206 GO:0005739::mitochondrion confident hh_3spa_A_1::82-124,131-243 confident psy14769 90 P52161::Protein max ::Transcription regulator. Forms a sequence-specific DNA-binding protein complex with MYC or MAD which recognizes the core sequence 5'-CAC[GA]TG-3'. The MYC-MAX complex is a transcriptional activator, whereas the MAD-MAX complex is a repressor.::Danio rerio (taxid: 7955) confident COG3074::Uncharacterized protein conserved in bacteria [Function unknown] 91.61::56-85 PF00010::HLH 99.77::15-67 GO:0006461::protein complex assembly confident hh_1nkp_B_1::15-47,49-90 very confident psy14439 245 Q9UH92::Max-like protein X ::Transcription regulator. Forms a sequence-specific DNA-binding protein complex with MAD1, MAD4, MNT, WBSCR14 and MLXIP which recognizes the core sequence 5'-CACGTG-3'. The TCFL4-MAD1, TCFL4-MAD4, TCFL4-WBSCR14 complexes are transcriptional repressors. Plays a role in transcriptional activation of glycolytic target genes. Involved in glucose-responsive gene regulation.::Homo sapiens (taxid: 9606) portable COG3074::Uncharacterized protein conserved in bacteria [Function unknown] 92.94::124-164 PF00010::HLH 99.59::79-135 GO:0046982::protein heterodimerization activity confident hh_1nkp_B_1::79-109,115-159 very confident psy8522 78 Q9Y3Q8::TSC22 domain family protein 4 ::Transcriptional repressor.::Homo sapiens (taxid: 9606) confident COG3074::Uncharacterized protein conserved in bacteria [Function unknown] 92.00::16-62 PF01166::TSC22 99.97::21-77 GO:0005634::nucleus confident hh_1dip_A_1::20-77 very confident psy1888 386 Q7L099::Protein RUFY3 ::Implicated in the formation of a single axon by developing neurons. May inhibit the formation of additional axons by inhibition of PI3K in minor neuronal processes.::Homo sapiens (taxid: 9606) confident COG3074::Uncharacterized protein conserved in bacteria [Function unknown] 94.46::269-324 PF02759::RUN 99.95::100-223 GO:0030426::growth cone confident hh_2dwk_A_1::58-184,186-235 very confident psy1363 756 no hit no match COG3083::Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only] 99.97::302-613 PF02995::DUF229 100.00::148-676 GO:0005615::extracellular space confident hh_1o98_A_1::450-465,468-506,511-528,530-541,543-547,549-550,560-560,565-587,602-610 confident psy5076 288 Q9XYM0::Adapter molecule Crk ::Adapter protein which interacts with C-terminal portion of mbc, homolog of human DOCK180. May play a role in cellular processes throughout development.::Drosophila melanogaster (taxid: 7227) very confident COG3103::SH3 domain protein [Signal transduction mechanisms] 92.36::128-262 PF00017::SH2 99.84::13-92 GO:0046330::positive regulation of JNK cascade very confident hh_2lqn_A_1::2-30,32-69,73-73,75-268 very confident psy10852 563 Q9XYM0::Adapter molecule Crk ::Adapter protein which interacts with C-terminal portion of mbc, homolog of human DOCK180. May play a role in cellular processes throughout development.::Drosophila melanogaster (taxid: 7227) confident COG3103::SH3 domain protein [Signal transduction mechanisms] 93.53::403-539 PF00017::SH2 99.79::13-92 GO:0046330::positive regulation of JNK cascade confident hh_2eyz_A_1::1-29,31-71,74-265 very confident psy6836 83 Q8AXU9::Endophilin-A3 ::Implicated in endocytosis. May recruit other proteins to membranes with high curvature (By similarity). Implicated in endocytosis of yolk proteins during oogenesis.::Gallus gallus (taxid: 9031) confident COG3103::SH3 domain protein [Signal transduction mechanisms] 92.28::41-78 PF14604::SH3_9 99.70::29-77 GO:0002090::regulation of receptor internalization confident hh_2dbm_A_1::24-83 very confident psy2443 77 Q8AXU9::Endophilin-A3 ::Implicated in endocytosis. May recruit other proteins to membranes with high curvature (By similarity). Implicated in endocytosis of yolk proteins during oogenesis.::Gallus gallus (taxid: 9031) confident COG3103::SH3 domain protein [Signal transduction mechanisms] 94.26::35-72 PF14604::SH3_9 99.78::23-71 GO:0002090::regulation of receptor internalization confident hh_2dbm_A_1::18-77 very confident psy7076 290 P43603::LAS seventeen-binding protein 3 ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG3103::SH3 domain protein [Signal transduction mechanisms] 93.53::56-158 PF14604::SH3_9 99.54::43-93 GO:0005737::cytoplasm confident hh_1ng2_A_1::37-68,71-159 very confident psy11791 143 Q8IWW6::Rho GTPase-activating protein 12 ::GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.::Homo sapiens (taxid: 9606) confident COG3103::SH3 domain protein [Signal transduction mechanisms] 92.34::25-64 PF14604::SH3_9 99.63::10-61 GO:0005856::cytoskeleton confident hh_1x2p_A_1::5-20,23-47,49-64 very confident psy6758 101 Q8IWW6::Rho GTPase-activating protein 12 ::GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.::Homo sapiens (taxid: 9606) confident COG3103::SH3 domain protein [Signal transduction mechanisms] 93.67::25-65 PF14604::SH3_9 99.73::10-61 GO:0005856::cytoskeleton confident hh_1x2p_A_1::4-20,23-47,49-65 very confident psy7077 336 P34092::Myosin IB heavy chain ::Myosin is a protein that binds to actin and has ATPase activity that is activated by actin. Myosin IB may have a role in chemotaxis and aggregation; it could serve to stabilize and even retract cortical structures, such as pseudopods and lamellopods. Involved in the whole cell motility of aggregation-stages cells. Overexpression results in significant decrease in the rate of cellular translocation and fluid-phase pinocytosis and abnormalities in the normal rearrangement of the actin cytoskeleton.::Dictyostelium discoideum (taxid: 44689) portable COG3103::SH3 domain protein [Signal transduction mechanisms] 94.61::187-316 PF14604::SH3_9 99.47::174-224 GO:0005886::plasma membrane confident hh_1ng2_A_1::169-197,200-235,238-239,241-260,278-319 very confident psy12864 147 Q0KL02::Triple functional domain protein ::Promotes the exchange of GDP by GTP. Together with leukocyte antigen-related (LAR) protein, it could play a role in coordinating cell-matrix and cytoskeletal rearrangements necessary for cell migration and cell growth.::Mus musculus (taxid: 10090) portable COG3103::SH3 domain protein [Signal transduction mechanisms] 93.87::60-106 PF14604::SH3_9 99.53::47-101 GO:0005886::plasma membrane confident hh_1ng2_A_1::3-30,33-73,76-85,90-106 very confident psy6450 139 Q68F99::SH3 and cysteine-rich domain-containing protein 3 ::::Xenopus tropicalis (taxid: 8364) portable COG3103::SH3 domain protein [Signal transduction mechanisms] 92.05::100-138 PF14604::SH3_9 99.65::28-76 GO:0043234::protein complex confident hh_2d8h_A_1::23-80 very confident psy10857 235 Q9P7E8::Protein app1 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG3103::SH3 domain protein [Signal transduction mechanisms] 90.49::22-111 PF14604::SH3_9 99.56::149-197 GO:0044446::intracellular organelle part confident hh_1ng2_A_1::55-119,137-139,141-202 very confident psy9679 122 Q8C120::SH3 domain-containing RING finger protein 3 ::::Mus musculus (taxid: 10090) confident COG3103::SH3 domain protein [Signal transduction mechanisms] 91.90::82-120 PF14604::SH3_9 99.76::70-120 GO:0046328::regulation of JNK cascade confident hh_2yun_A_1::65-105,108-122 very confident psy195 691 P46059::Solute carrier family 15 member 1 ::Proton-coupled intake of oligopeptides of 2 to 4 amino acids with a preference for dipeptides. May constitute a major route for the absorption of protein digestion end-products.::Homo sapiens (taxid: 9606) confident COG3104::PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] 100.00::12-680 PF00854::PTR2 99.95::88-378 GO:0005427::proton-dependent oligopeptide secondary active transmembrane transporter activity confident hh_4aps_A_1::14-84,86-110,113-113,119-148,151-183,191-310,317-339,341-350,352-379,436-436,585-685 very confident psy1432 850 P46029::Solute carrier family 15 member 2 ::Proton-coupled intake of oligopeptides of 2 to 4 amino acids with a preference for dipeptides.::Oryctolagus cuniculus (taxid: 9986) portable COG3104::PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] 100.00::231-820 PF00854::PTR2 99.92::346-778 GO:0042936::dipeptide transporter activity confident rp_2xut_A_1::230-274,295-301,315-372,379-410,412-442,450-561,565-640 very confident psy7928 87 Q7PIR5::Facilitated trehalose transporter Tret1 ::High-capacity facilitative transporter for trehalose. Does not transport maltose, sucrose or lactose. Mediates the bidirectional transfer of trehalose. Responsible for the transport of trehalose synthesized in the fat body and the incorporation of trehalose into other tissues that require a carbon source, thereby regulating trehalose levels in the hemolymph.::Anopheles gambiae (taxid: 7165) confident COG3104::PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] 96.46::2-57 PF07690::MFS_1 97.50::8-54 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::8-60,68-85 confident psy16498 102 Q15465::Sonic hedgehog protein ::Binds to the patched (PTC) receptor, which functions in association with smoothened (SMO), to activate the transcription of target genes. In the absence of SHH, PTC represses the constitutive signaling activity of SMO. Also regulates another target, the gli oncogene. Intercellular signal essential for a variety of patterning events during development: signal produced by the notochord that induces ventral cell fate in the neural tube and somites, and the polarizing signal for patterning of the anterior-posterior axis of the developing limb bud. Displays both floor plate- and motor neuron-inducing activity. The threshold concentration of N-product required for motor neuron induction is 5-fold lower than that required for floor plate induction.::Homo sapiens (taxid: 9606) confident COG3108::Uncharacterized protein conserved in bacteria [Function unknown] 99.80::7-79 PF05951::Peptidase_M15_2 99.88::7-75 GO:0030336::negative regulation of cell migration confident hh_3n1g_B_1::2-75 very confident psy5680 201 Q95108::Thioredoxin, mitochondrial ::Has an anti-apoptotic function and plays an important role in the regulation of mitochondrial membrane potential (By similarity). Possesses a dithiol-reducing activity. Cooperates with SP-22 protein to protect glutamine synthetase and other proteins from Fe(2+) ion/dithiothreitol-mediated damage. Without SP-22, the protein had no protecting activity.::Bos taurus (taxid: 9913) portable COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.88::58-163 PF00085::Thioredoxin 99.90::58-160 GO:0005829::cytosol confident hh_1wmj_A_1::58-116,118-146,148-164 very confident psy17832 189 Q95108::Thioredoxin, mitochondrial ::Has an anti-apoptotic function and plays an important role in the regulation of mitochondrial membrane potential (By similarity). Possesses a dithiol-reducing activity. Cooperates with SP-22 protein to protect glutamine synthetase and other proteins from Fe(2+) ion/dithiothreitol-mediated damage. Without SP-22, the protein had no protecting activity.::Bos taurus (taxid: 9913) portable COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.91::59-166 PF00085::Thioredoxin 99.91::61-163 GO:0005829::cytosol confident hh_1wmj_A_1::57-105,107-148,150-151,154-169 very confident psy11159 141 Q95108::Thioredoxin, mitochondrial ::Has an anti-apoptotic function and plays an important role in the regulation of mitochondrial membrane potential (By similarity). Possesses a dithiol-reducing activity. Cooperates with SP-22 protein to protect glutamine synthetase and other proteins from Fe(2+) ion/dithiothreitol-mediated damage. Without SP-22, the protein had no protecting activity.::Bos taurus (taxid: 9913) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.92::29-134 PF00085::Thioredoxin 99.95::30-131 GO:0005829::cytosol confident hh_1wmj_A_1::26-75,77-118,120-139 very confident psy6819 135 Q95108::Thioredoxin, mitochondrial ::Has an anti-apoptotic function and plays an important role in the regulation of mitochondrial membrane potential (By similarity). Possesses a dithiol-reducing activity. Cooperates with SP-22 protein to protect glutamine synthetase and other proteins from Fe(2+) ion/dithiothreitol-mediated damage. Without SP-22, the protein had no protecting activity.::Bos taurus (taxid: 9913) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.92::24-130 PF00085::Thioredoxin 99.94::27-126 GO:0005829::cytosol confident hh_1wmj_A_1::21-114,116-134 very confident psy5679 149 Q9PJK3::Thioredoxin ::Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions.::Chlamydia muridarum (strain MoPn / Nigg) (taxid: 243161) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.92::44-149 PF00085::Thioredoxin 99.93::45-146 GO:0005829::cytosol confident hh_1wmj_A_1::44-102,104-132,134-148 very confident psy11066 70 Q9V429::Thioredoxin-2 ::Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. As a reducing substrate of peroxiredoxin 1, thioredoxin 2 is preferred over thioredoxin 1.::Drosophila melanogaster (taxid: 7227) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.70::2-70 PF00085::Thioredoxin 99.76::2-68 GO:0005829::cytosol confident hh_2vim_A_1::2-69 very confident psy7938 305 P04785::Protein disulfide-isomerase ::This multifunctional protein catalyzes the formation, breakage and rearrangement of disulfide bonds. At the cell surface, seems to act as a reductase that cleaves disulfide bonds of proteins attached to the cell. May therefore cause structural modifications of exofacial proteins. Inside the cell, seems to form/rearrange disulfide bonds of nascent proteins. At high concentrations, functions as a chaperone that inhibits aggregation of misfolded proteins. At low concentrations, facilitates aggregation (anti-chaperone activity). May be involved with other chaperones in the structural modification of the TG precursor in hormone biogenesis. Also acts a structural subunit of various enzymes such as prolyl 4-hydroxylase and microsomal triacylglycerol transfer protein MTTP.::Rattus norvegicus (taxid: 10116) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.74::173-280 PF00085::Thioredoxin 99.83::174-277 GO:0006457::protein folding confident hh_3uem_A_1::5-21,25-58,84-281 very confident psy9104 128 Q00248::Protein disulfide-isomerase ::Participates in the folding of proteins containing disulfide bonds, may be involved in glycosylation, prolyl hydroxylation and triglyceride transfer.::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.89::31-128 PF00085::Thioredoxin 99.89::35-127 GO:0006457::protein folding confident hh_2dj1_A_1::32-96,98-119,121-127 very confident psy7943 142 P04785::Protein disulfide-isomerase ::This multifunctional protein catalyzes the formation, breakage and rearrangement of disulfide bonds. At the cell surface, seems to act as a reductase that cleaves disulfide bonds of proteins attached to the cell. May therefore cause structural modifications of exofacial proteins. Inside the cell, seems to form/rearrange disulfide bonds of nascent proteins. At high concentrations, functions as a chaperone that inhibits aggregation of misfolded proteins. At low concentrations, facilitates aggregation (anti-chaperone activity). May be involved with other chaperones in the structural modification of the TG precursor in hormone biogenesis. Also acts a structural subunit of various enzymes such as prolyl 4-hydroxylase and microsomal triacylglycerol transfer protein MTTP.::Rattus norvegicus (taxid: 10116) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.89::24-135 PF00085::Thioredoxin 99.91::28-132 GO:0009986::cell surface confident hh_1mek_A_1::22-123,126-136 very confident psy9732 250 Q8VBT0::Thioredoxin-related transmembrane protein 1 ::May participate in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyze dithiol-disulfide exchange reactions.::Mus musculus (taxid: 10090) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.65::2-93 PF00085::Thioredoxin 99.77::3-90 GO:0015035::protein disulfide oxidoreductase activity confident hh_3idv_A_1::3-68,73-75,77-95,103-132,135-143 very confident psy3441 100 Q921X9::Protein disulfide-isomerase A5 ::::Mus musculus (taxid: 10090) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.39::53-100 PF00085::Thioredoxin 99.46::57-100 GO:0031090::organelle membrane confident hh_3uem_A_1::9-100 very confident psy14086 324 Q8NBS9::Thioredoxin domain-containing protein 5 ::Possesses thioredoxin activity. Has been shown to reduce insulin disulfide bonds. Also complements protein disulfide-isomerase deficiency in yeast.::Homo sapiens (taxid: 9606) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.82::81-188 PF00085::Thioredoxin 99.84::83-185 GO:0042175::nuclear outer membrane-endoplasmic reticulum membrane network confident hh_3uem_A_1::8-13,17-31,33-42,44-68,82-128,131-196,200-253,255-270,273-274,277-319 very confident psy12669 157 Q9D1Q6::Endoplasmic reticulum resident protein 44 ::Mediates thiol-dependent retention in the early secretory pathway, forming mixed disulfides with substrate proteins through its conserved CRFS motif. Inhibits the calcium channel activity of ITPR1. May have a role in the control of oxidative protein folding in the endoplasmic reticulum. Required to retain ERO1L and ERO1LB in the endoplasmic reticulum.::Mus musculus (taxid: 10090) portable COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.92::26-140 PF00085::Thioredoxin 99.94::29-137 GO:0044446::intracellular organelle part confident hh_2dml_A_1::23-73,80-139 very confident psy1110 366 P38659::Protein disulfide-isomerase A4 ::::Rattus norvegicus (taxid: 10116) portable COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.69::99-324 PF00085::Thioredoxin 99.81::101-321 GO:0044464::cell part confident hh_1x5d_A_1::98-148,264-325 very confident psy160 346 no hit no match COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.61::192-295 PF00085::Thioredoxin 99.77::89-188 GO:0044464::cell part confident hh_3idv_A_1::86-178,180-283,286-286,288-295 very confident psy159 285 no hit no match COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.72::56-160 PF00085::Thioredoxin 99.83::58-157 GO:0044464::cell part confident hh_3idv_A_1::55-147,149-250,253-265 very confident psy3452 116 P17967::Protein disulfide-isomerase ::Participates in the folding of proteins containing disulfide bonds, may be involved in glycosylation, prolyl hydroxylation and triglyceride transfer.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.77::1-66 PF00085::Thioredoxin 99.75::2-66 GO:0044710::single-organism metabolic process confident hh_2dj1_A_1::1-65 very confident psy7942 216 P04785::Protein disulfide-isomerase ::This multifunctional protein catalyzes the formation, breakage and rearrangement of disulfide bonds. At the cell surface, seems to act as a reductase that cleaves disulfide bonds of proteins attached to the cell. May therefore cause structural modifications of exofacial proteins. Inside the cell, seems to form/rearrange disulfide bonds of nascent proteins. At high concentrations, functions as a chaperone that inhibits aggregation of misfolded proteins. At low concentrations, facilitates aggregation (anti-chaperone activity). May be involved with other chaperones in the structural modification of the TG precursor in hormone biogenesis. Also acts a structural subunit of various enzymes such as prolyl 4-hydroxylase and microsomal triacylglycerol transfer protein MTTP.::Rattus norvegicus (taxid: 10116) portable COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 97.71::30-151 PF01216::Calsequestrin 99.92::3-211 GO:0005783::endoplasmic reticulum confident hh_3uem_A_1::24-78,101-135,137-210 very confident psy17502 461 Q63081::Protein disulfide-isomerase A6 ::May function as a chaperone that inhibits aggregation of misfolded proteins. Plays a role in platelet aggregation and activation by agonists such as convulxin, collagen and thrombin.::Rattus norvegicus (taxid: 10116) very confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.82::14-122 PF01216::Calsequestrin 99.95::15-372 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment very confident hh_1x5d_A_1::13-124 very confident psy9502 493 Q9D1Q6::Endoplasmic reticulum resident protein 44 ::Mediates thiol-dependent retention in the early secretory pathway, forming mixed disulfides with substrate proteins through its conserved CRFS motif. Inhibits the calcium channel activity of ITPR1. May have a role in the control of oxidative protein folding in the endoplasmic reticulum. Required to retain ERO1L and ERO1LB in the endoplasmic reticulum.::Mus musculus (taxid: 10090) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.76::117-230 PF01216::Calsequestrin 99.97::107-439 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_2r2j_A_1::116-272,275-289,291-385,387-413,415-447,453-464,468-493 very confident psy6451 332 Q8K581::Thioredoxin domain-containing protein 9 ::Significantly diminishes the chaperonin TCP1 complex ATPase activity, thus negatively impacts protein folding, including that of actin or tubulin.::Rattus norvegicus (taxid: 10116) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.77::134-238 PF02114::Phosducin 99.95::24-247 GO:0005634::nucleus confident hh_3evi_A_1::131-139,141-192,196-228,230-247 very confident psy14385 228 Q5RB77::Phosducin-like protein 3 ::Modulates the activation of caspases during apoptosis.::Pongo abelii (taxid: 9601) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.35::130-217 PF02114::Phosducin 100.00::85-226 GO:0005737::cytoplasm confident hh_2dbc_A_1::124-225 very confident psy12938 612 Q71A39::Phosducin-like protein 1 ::Required for normal chemotaxis in response to cAMP and folate. Required for the heterodimerization of the G protein beta and gamma subunits gpbA and gpgA, which is itself thought to be necessary for prenylation of the gamma subunit gpgA and its association with plasma membranes.::Dictyostelium discoideum (taxid: 44689) portable COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.50::480-594 PF02114::Phosducin 100.00::406-601 GO:0005737::cytoplasm confident hh_3egg_C_1::181-199,212-226,277-378 very confident psy17681 148 Q5E936::Thioredoxin domain-containing protein 12 ::Possesses significant protein thiol-disulfide oxidase activity.::Bos taurus (taxid: 9913) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.70::30-146 PF03190::Thioredox_DsbH 99.75::27-144 GO:0002162::dystroglycan binding confident hh_1sen_A_1::21-101,104-147 very confident psy11016 328 Q5RE31::Magnesium transporter protein 1 ::May be involved in N-glycosylation through its association with N-oligosaccharyl transferase. May be involved in Mg(2+) transport in epithelial cells.::Pongo abelii (taxid: 9601) very confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.73::46-171 PF04756::OST3_OST6 99.98::160-298 GO:0008250::oligosaccharyltransferase complex very confident hh_3ga4_A_1::33-60,62-105,107-184 very confident psy8428 328 Q5RE31::Magnesium transporter protein 1 ::May be involved in N-glycosylation through its association with N-oligosaccharyl transferase. May be involved in Mg(2+) transport in epithelial cells.::Pongo abelii (taxid: 9601) very confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.73::46-171 PF04756::OST3_OST6 99.98::160-298 GO:0008250::oligosaccharyltransferase complex very confident hh_3ga4_A_1::33-60,62-105,107-184 very confident psy8429 314 Q8BTV1::Tumor suppressor candidate 3 ::Magnesium transporter. May be involved in N-glycosylation through its association with N-oligosaccharyl transferase.::Mus musculus (taxid: 10090) very confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.74::46-171 PF04756::OST3_OST6 99.98::160-309 GO:0008250::oligosaccharyltransferase complex very confident hh_3ga4_A_1::33-60,62-105,107-184 very confident psy543 278 Q9USR1::Thioredoxin-like protein 1 ::Has a role in cellular detoxification of alkyl hydroperoxide.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.80::3-101 PF06201::PITH 100.00::116-257 GO:0005829::cytosol confident hh_1wwy_A_1::109-272 very confident psy3889 243 P81623::Endoplasmic reticulum resident protein 29 ::Does not seem to be a disulfide isomerase. Plays an important role in the processing of secretory proteins within the ER.::Bos taurus (taxid: 9913) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.65::19-104 PF07749::ERp29 99.93::131-231 GO:0030133::transport vesicle confident hh_2c0g_A_1::19-47,50-111,114-114,119-187,193-243 very confident psy6924 89 Q8NBF2::NHL repeat-containing protein 2 ::::Homo sapiens (taxid: 9606) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 98.97::41-81 PF08534::Redoxin 99.58::18-84 GO:0009570::chloroplast stroma confident hh_2hyx_A_1::13-38,40-84 very confident psy9102 277 P11598::Protein disulfide-isomerase A3 ::::Rattus norvegicus (taxid: 10116) confident COG3118::Thioredoxin domain-containing protein [Posttranslational modification, protein turnover, chaperones] 99.74::101-213 PF13848::Thioredoxin_6 99.82::3-209 GO:0005774::vacuolar membrane confident hh_3uem_A_1::3-20,22-34,38-45,49-50,52-63,66-88,95-95,107-137,139-174,177-277 very confident psy10434 593 Q5FYB0::Arylsulfatase J ::::Homo sapiens (taxid: 9606) portable COG3119::AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] 100.00::28-408 PF00884::Sulfatase 100.00::30-354 GO:0005509::calcium ion binding confident hh_1fsu_A_1::27-49,51-225,231-291,293-296,300-410,414-426,485-490,496-557,559-565 very confident psy5200 271 Q9VEX0::Extracellular sulfatase SULF-1 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG3119::AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] 100.00::7-255 PF00884::Sulfatase 100.00::7-252 GO:0005783::endoplasmic reticulum confident hh_3ed4_A_1::7-63,68-89,93-131,137-142,155-242,244-266 very confident psy12320 175 Q9VEX0::Extracellular sulfatase SULF-1 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG3119::AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] 99.95::43-165 PF00884::Sulfatase 99.82::45-163 GO:0005783::endoplasmic reticulum confident hh_2vqr_A_1::39-112,120-149 very confident psy12301 632 P15848::Arylsulfatase B ::::Homo sapiens (taxid: 9606) confident COG3119::AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] 100.00::80-486 PF00884::Sulfatase 100.00::81-413 GO:0005794::Golgi apparatus confident hh_1fsu_A_1::79-100,102-279,285-349,359-420,443-488,492-503,538-538,547-552,561-613,615-622,624-630 very confident psy1088 905 P15848::Arylsulfatase B ::::Homo sapiens (taxid: 9606) portable COG3119::AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] 100.00::58-468 PF00884::Sulfatase 100.00::60-382 GO:0008484::sulfuric ester hydrolase activity confident hh_1fsu_A_1::58-79,81-253,259-322,327-383 very confident psy7399 107 Q5FYB0::Arylsulfatase J ::::Homo sapiens (taxid: 9606) portable COG3119::AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] 99.95::1-105 PF00884::Sulfatase 99.90::2-101 GO:0008484::sulfuric ester hydrolase activity confident hh_1fsu_A_1::1-39,47-104 very confident psy1575 242 P50429::Arylsulfatase B ::::Mus musculus (taxid: 10090) portable COG3119::AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism] 99.98::10-205 PF00884::Sulfatase 99.96::12-234 GO:0071944::cell periphery confident hh_1fsu_A_1::10-31,33-163,165-205,217-225,228-241 very confident psy6259 227 Q5RAG8::Prolyl 4-hydroxylase subunit alpha-1 ::Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.::Pongo abelii (taxid: 9601) portable COG3128::PiuC Uncharacterized iron-regulated protein [Function unknown] 99.67::47-226 PF13640::2OG-FeII_Oxy_3 99.71::132-226 GO:0031545::peptidyl-proline 4-dioxygenase activity confident hh_3itq_A_1::38-80,83-98,104-123,128-226 very confident psy6258 136 Q5ZLK5::Prolyl 4-hydroxylase subunit alpha-2 ::Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.::Gallus gallus (taxid: 9031) portable COG3128::PiuC Uncharacterized iron-regulated protein [Function unknown] 96.46::72-134 PF13640::2OG-FeII_Oxy_3 98.93::50-133 GO:0031545::peptidyl-proline 4-dioxygenase activity confident hh_3itq_A_1::41-54,57-70,72-135 very confident psy8177 312 Q5RAG8::Prolyl 4-hydroxylase subunit alpha-1 ::Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.::Pongo abelii (taxid: 9601) confident COG3128::PiuC Uncharacterized iron-regulated protein [Function unknown] 99.22::93-268 PF13640::2OG-FeII_Oxy_3 99.38::172-269 GO:0055114::oxidation-reduction process confident hh_3itq_A_1::83-125,130-145,148-196,202-271 very confident psy5105 100 Q86W50::Methyltransferase-like protein 16 ::Probable methyltransferase.::Homo sapiens (taxid: 9606) confident COG3129::Predicted SAM-dependent methyltransferase [General function prediction only] 99.94::26-96 PF05971::Methyltransf_10 100.00::1-97 GO:0005634::nucleus confident hh_2h00_A_1::38-95 very confident psy5103 109 Q86W50::Methyltransferase-like protein 16 ::Probable methyltransferase.::Homo sapiens (taxid: 9606) confident COG3129::Predicted SAM-dependent methyltransferase [General function prediction only] 99.97::26-108 PF05971::Methyltransf_10 100.00::1-108 GO:0008168::methyltransferase activity confident hh_2h00_A_1::38-108 very confident psy7930 146 Q9D8X1::Copper homeostasis protein cutC homolog ::May play a role in copper homeostasis. Can bind one Cu(1+) per subunit.::Mus musculus (taxid: 10090) confident COG3142::CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism] 100.00::9-142 PF03932::CutC 100.00::10-141 GO:0016235::aggresome confident hh_3iwp_A_1::6-68,70-142 very confident psy949 569 Q9BT30::Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 ::Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.::Homo sapiens (taxid: 9606) confident COG3145::AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair] 99.69::22-146 PF13532::2OG-FeII_Oxy_2 99.94::30-166 GO:0005739::mitochondrion confident hh_3tht_A_1::35-55,58-72,80-112,115-172,174-176 very confident psy941 487 Q9D6Z0::Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7 ::Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.::Mus musculus (taxid: 10090) confident COG3145::AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair] 99.91::127-293 PF13532::2OG-FeII_Oxy_2 99.97::132-296 GO:0005739::mitochondrion confident hh_3tht_A_2::317-358,361-365,367-395,398-445,448-483 very confident psy4937 356 Q9D8F1::Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 ::Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.::Mus musculus (taxid: 10090) confident COG3145::AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair] 99.80::115-330 PF13532::2OG-FeII_Oxy_2 99.98::119-333 GO:0016706::oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors confident hh_3tht_A_1::114-192,194-194,196-209,212-244,291-338 very confident psy7738 307 Q08BA6::RNA demethylase ALKBH5 ::Dioxygenase that demethylates RNA by oxidative demethylation: specifically demethylates N(6)-methyladenosine (m(6)A) RNA, the most prevalent internal modification of messenger RNA (mRNA) in higher eukaryotes. Requires molecular oxygen, alpha-ketoglutarate and iron.::Danio rerio (taxid: 7955) confident COG3145::AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair] 99.91::46-244 PF13532::2OG-FeII_Oxy_2 100.00::52-247 GO:0035515::oxidative RNA demethylase activity confident hh_3tht_A_1::47-69,73-89,92-112,115-115,118-118,123-136,138-149,151-183,190-202,205-253 very confident psy11248 227 Q6P6C2::RNA demethylase ALKBH5 ::Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.::Homo sapiens (taxid: 9606) confident COG3145::AlkB Alkylated DNA repair protein [DNA replication, recombination, and repair] 99.85::41-143 PF13532::2OG-FeII_Oxy_2 99.96::19-146 GO:0035515::oxidative RNA demethylase activity confident hh_3tht_A_1::24-35,37-48,50-82,89-101,104-150,160-177 very confident psy4837 100 Q5R7U6::Cytochrome c oxidase assembly protein COX11, mitochondrial ::Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.::Pongo abelii (taxid: 9601) confident COG3175::COX11 Cytochrome oxidase assembly factor [Posttranslational modification, protein turnover, chaperones] 100.00::3-89 PF04442::CtaG_Cox11 100.00::3-88 GO:0005761::mitochondrial ribosome confident hh_1so9_A_1::3-89 very confident psy1740 505 Q29JP8::Adenosine monophosphate-protein transferase FICD homolog ::Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG3177::Fic family protein [Function unknown] 99.96::48-259 PF02661::Fic 99.86::137-234 GO:0070733::protein adenylyltransferase activity confident hh_3cuc_A_1::48-290 very confident psy14226 532 P90925::Probable phenylalanine-4-hydroxylase 1 ::::Caenorhabditis elegans (taxid: 6239) confident COG3186::Phenylalanine-4-hydroxylase [Amino acid transport and metabolism] 100.00::189-471 PF00351::Biopterin_H 100.00::137-522 GO:0006571::tyrosine biosynthetic process confident hh_1toh_A_1::134-263,319-524 very confident psy14589 655 P16331::Phenylalanine-4-hydroxylase ::::Mus musculus (taxid: 10090) confident COG3186::Phenylalanine-4-hydroxylase [Amino acid transport and metabolism] 100.00::382-580 PF00351::Biopterin_H 100.00::345-636 GO:0006726::eye pigment biosynthetic process confident hh_1toh_A_1::341-535,541-581,593-620,623-636 very confident psy14594 125 P16331::Phenylalanine-4-hydroxylase ::::Mus musculus (taxid: 10090) confident COG3186::Phenylalanine-4-hydroxylase [Amino acid transport and metabolism] 99.97::3-83 PF00351::Biopterin_H 100.00::1-124 GO:0042221::response to chemical stimulus confident hh_1phz_A_1::1-103 very confident psy18225 166 Q8NEL9::Phospholipase DDHD1 ::Probable phospholipase that hydrolyzes phosphatidic acid. The different isoforms may change the substrate specificity.::Homo sapiens (taxid: 9606) confident COG3208::GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] 95.38::142-162 PF05057::DUF676 97.60::142-162 GO:0043231::intracellular membrane-bounded organelle confident hh_2qjw_A_1::142-164 portable psy16512 815 Q9VRA2::Molybdenum cofactor sulfurase ::Sulfurates the molybdenum cofactor. Sulfation of molybdenum is essential for xanthine dehydrogenase (XDH) and aldehyde oxidase (ADO) enzymes in which molybdenum cofactor is liganded by 1 oxygen and 1 sulfur atom in active form.::Drosophila melanogaster (taxid: 7227) confident COG3217::Uncharacterized Fe-S protein [General function prediction only] 100.00::533-800 PF00266::Aminotran_5 100.00::63-487 GO:0005886::plasma membrane confident hh_2rqs_A_1::3-34,41-55 very confident psy15307 499 P51692::Signal transducer and activator of transcription 5B ::Carries out a dual function: signal transduction and activation of transcription. Mediates cellular responses to the cytokine KITLG/SCF and other growth factors. Binds to the GAS element and activates PRL-induced transcription.::Homo sapiens (taxid: 9606) confident COG3217::Uncharacterized Fe-S protein [General function prediction only] 99.71::360-499 PF02864::STAT_bind 100.00::134-357 GO:0005730::nucleolus confident hh_1y1u_A_1::135-160,162-197,199-311,316-419 very confident psy10370 280 Q9CW42::MOSC domain-containing protein 1, mitochondrial ::As a component of an N-hydroxylated prodrug-converting complex required to reduce N-hydroxylated prodrugs, such as benzamidoxime. Also able to reduce N(omega)-hydroxy-L-arginine (NOHA) and N(omega)-hydroxy-N(delta)-methyl-L-arginine (NHAM) into L-arginine and N(delta)-methyl-L-arginine, respectively.::Mus musculus (taxid: 10090) confident COG3217::Uncharacterized Fe-S protein [General function prediction only] 100.00::3-280 PF03473::MOSC 99.96::136-275 GO:0005634::nucleus confident hh_2exn_A_1::7-16,18-38,40-45,49-72,75-99,101-114 confident psy13259 345 Q5VT66::MOSC domain-containing protein 1, mitochondrial ::As a component of an N-hydroxylated prodrug-converting complex required to reduce N-hydroxylated prodrugs, such as benzamidoxime. Also able to reduce N(omega)-hydroxy-L-arginine (NOHA) and N(omega)-hydroxy-N(delta)-methyl-L-arginine (NHAM) into L-arginine and N(delta)-methyl-L-arginine, respectively.::Homo sapiens (taxid: 9606) confident COG3217::Uncharacterized Fe-S protein [General function prediction only] 100.00::35-343 PF03476::MOSC_N 99.96::34-167 GO:0055114::oxidation-reduction process confident hh_2exn_A_1::37-57,64-64,76-85,87-109,111-116,119-134,136-164,166-167,171-178,180-182 confident psy2094 341 Q9CW42::MOSC domain-containing protein 1, mitochondrial ::As a component of an N-hydroxylated prodrug-converting complex required to reduce N-hydroxylated prodrugs, such as benzamidoxime. Also able to reduce N(omega)-hydroxy-L-arginine (NOHA) and N(omega)-hydroxy-N(delta)-methyl-L-arginine (NHAM) into L-arginine and N(delta)-methyl-L-arginine, respectively.::Mus musculus (taxid: 10090) confident COG3217::Uncharacterized Fe-S protein [General function prediction only] 100.00::23-334 PF03476::MOSC_N 99.97::22-152 GO:0055114::oxidation-reduction process confident hh_2exn_A_1::25-45,52-54,63-70,72-93,95-102,106-127,130-152,157-167 confident psy3351 276 P08582::Melanotransferrin ::Involved in iron cellular uptake. Seems to be internalized and then recycled back to the cell membrane. Binds a single atom of iron per subunit. Could also bind zinc.::Homo sapiens (taxid: 9606) portable COG3221::PhnD ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism] 96.61::2-45 PF00405::Transferrin 100.00::1-272 GO:0005506::iron ion binding confident hh_2d3i_A_1::1-5,8-9,11-70,80-90,92-131,197-197,200-239,243-262 very confident psy11919 453 P24627::Lactotransferrin ::The lactotransferrin transferrin-like domain 1 functions as a serine protease of the peptidase S60 family that cuts arginine rich regions. This function contributes to the antimicrobial activity.::Bos taurus (taxid: 9913) portable COG3221::PhnD ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism] 99.25::177-393 PF00405::Transferrin 100.00::130-446 GO:0043167::ion binding confident hh_3skp_A_1::128-132,137-151,158-159,162-195,199-257,262-264,269-275,277-285,291-316,318-334,336-377,382-409,412-439,441-451 very confident psy11925 458 P08582::Melanotransferrin ::Involved in iron cellular uptake. Seems to be internalized and then recycled back to the cell membrane. Binds a single atom of iron per subunit. Could also bind zinc.::Homo sapiens (taxid: 9606) portable COG3221::PhnD ABC-type phosphate/phosphonate transport system, periplasmic component [Inorganic ion transport and metabolism] 99.77::123-381 PF00405::Transferrin 100.00::99-430 GO:0043231::intracellular membrane-bounded organelle confident hh_3skp_A_1::97-119,125-164,166-226,231-233,238-244,246-254,260-284,286-299,307-310,315-329,332-364,369-397,400-430,440-449 very confident psy15702 259 Q9Y366::Intraflagellar transport protein 52 homolog ::::Homo sapiens (taxid: 9606) portable COG3225::GldG ABC-type uncharacterized transport system involved in gliding motility, auxiliary component [Cell motility and secretion] 99.58::2-209 PF09822::ABC_transp_aux 99.58::3-74 GO:0042733::embryonic digit morphogenesis confident hh_3soz_A_1::3-76,79-85,99-110,113-121,123-137,144-152,155-191 portable psy6224 82 P19967::Cytochrome b5-related protein ::May play a role in muscle cell metabolism.::Drosophila melanogaster (taxid: 7227) confident COG3239::DesA Fatty acid desaturase [Lipid metabolism] 91.27::32-81 PF00487::FA_desaturase 97.80::28-81 GO:0005739::mitochondrion confident no hit no match psy10886 320 Q5XIF5::Sphingolipid delta(4)-desaturase DES1 ::Has sphingolipid-delta-4-desaturase activity. Converts D-erythro-sphinganine to D-erythro-sphingosine (E-sphing-4-enine).::Rattus norvegicus (taxid: 10116) very confident COG3239::DesA Fatty acid desaturase [Lipid metabolism] 99.97::24-298 PF00487::FA_desaturase 99.95::66-290 GO:0042284::sphingolipid delta-4 desaturase activity very confident rp_1vt4_I_1::6-37,39-60,63-74,77-127,133-149,164-172,174-176,179-230,232-279,282-312 portable psy438 669 Q93324::Probable beta-mannosidase ::::Caenorhabditis elegans (taxid: 6239) portable COG3250::LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] 100.00::10-554 PF02836::Glyco_hydro_2_C 100.00::255-451 GO:0009057::macromolecule catabolic process confident hh_3cmg_A_1::66-81,85-93,97-130,139-140,145-171,254-275,279-347,355-356,365-401,403-426,428-447 very confident psy15572 144 Q5B7W2::Beta-mannosidase B ::Exoglycosidase that cleaves the single beta-linked mannose residue from the non-reducing end of all N-linked glycoprotein oligosaccharides. Involved in the degradation of mannan and galactomannan.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG3250::LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] 99.30::6-140 PF02837::Glyco_hydro_2_N 99.75::4-142 GO:0009057::macromolecule catabolic process confident hh_2je8_A_1::3-26,28-52,81-83,85-142 very confident psy15568 1231 Q28DH0::Phosphoribosyl pyrophosphate synthase-associated protein 2 ::Seems to play a negative regulatory role in 5-phosphoribose 1-diphosphate synthesis.::Xenopus tropicalis (taxid: 8364) confident COG3250::LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] 100.00::43-535 PF14572::Pribosyl_synth 100.00::1019-1225 GO:0004749::ribose phosphate diphosphokinase activity confident hh_2ji4_A_1::920-974,976-1005,1007-1007,1017-1040,1075-1231 very confident psy16778 433 Q9UJM8::Hydroxyacid oxidase 1 ::Has 2-hydroxyacid oxidase activity. Most active on the 2-carbon substrate glycolate, but is also active on 2-hydroxy fatty acids, with high activity towards 2-hydroxy palmitate and 2-hydroxy octanoate.::Homo sapiens (taxid: 9606) portable COG3265::GntK Gluconate kinase [Carbohydrate transport and metabolism] 99.93::44-203 PF01070::FMN_dh 100.00::206-405 GO:0043231::intracellular membrane-bounded organelle confident rp_1knq_A_1::25-28,35-176,178-194 very confident psy12849 138 Q3T067::Saccharopine dehydrogenase-like oxidoreductase ::::Bos taurus (taxid: 9913) portable COG3268::Uncharacterized conserved protein [Function unknown] 99.95::18-133 PF03435::Saccharop_dh 99.87::28-132 GO:0005811::lipid particle confident hh_2z2v_A_1::31-59,61-65,67-90,95-131 confident psy1304 184 Q3T067::Saccharopine dehydrogenase-like oxidoreductase ::::Bos taurus (taxid: 9913) confident COG3268::Uncharacterized conserved protein [Function unknown] 99.88::40-184 PF03435::Saccharop_dh 99.72::47-184 GO:0005811::lipid particle confident hh_2z2v_A_1::74-81,87-133,135-138,140-163,167-167,169-184 confident psy8580 274 no hit no match COG3277::GAR1 RNA-binding protein involved in rRNA processing [Translation, ribosomal structure and biogenesis] 99.49::30-111 PF04410::Gar1 100.00::12-163 GO:0043229::intracellular organelle confident hh_2v3m_A_1::1-20,22-64,66-110,113-125 very confident psy7464 119 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 91.48::3-86 PF02913::FAD-oxidase_C 98.67::1-86 GO:0005778::peroxisomal membrane confident hh_4bby_A_1::2-105 very confident psy9370 101 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 92.79::4-86 PF02913::FAD-oxidase_C 98.62::1-87 GO:0071949::FAD binding confident hh_4bby_A_1::2-97 very confident psy1486 154 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 90.85::54-139 PF02913::FAD-oxidase_C 99.12::1-140 GO:0071949::FAD binding confident hh_4bby_A_1::1-146 very confident psy10393 113 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 91.83::3-86 PF02913::FAD-oxidase_C 98.96::1-104 GO:0071949::FAD binding confident hh_4bby_A_1::2-104 very confident psy4597 110 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 92.48::3-86 PF02913::FAD-oxidase_C 98.51::1-86 GO:0071949::FAD binding confident hh_4bby_A_1::2-94 very confident psy13789 95 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 93.46::3-86 PF02913::FAD-oxidase_C 98.59::1-86 GO:0071949::FAD binding confident hh_4bby_A_1::2-92 very confident psy4570 95 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 93.46::3-86 PF02913::FAD-oxidase_C 98.59::1-86 GO:0071949::FAD binding confident hh_4bby_A_1::2-92 very confident psy13836 96 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 93.46::7-92 PF02913::FAD-oxidase_C 98.91::3-91 GO:0071949::FAD binding confident hh_4bby_A_1::3-95 very confident psy3514 159 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 91.37::59-144 PF02913::FAD-oxidase_C 99.16::3-145 GO:0071949::FAD binding confident hh_2uuu_A_1::4-154 very confident psy3321 110 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 92.48::3-86 PF02913::FAD-oxidase_C 98.51::1-86 GO:0071949::FAD binding confident hh_4bby_A_1::2-94 very confident psy15059 101 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 92.40::4-86 PF02913::FAD-oxidase_C 98.65::1-87 GO:0071949::FAD binding confident hh_4bby_A_1::2-93 very confident psy11487 101 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 92.40::4-86 PF02913::FAD-oxidase_C 98.65::1-87 GO:0071949::FAD binding confident hh_4bby_A_1::2-93 very confident psy6954 95 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 93.46::3-86 PF02913::FAD-oxidase_C 98.59::1-86 GO:0071949::FAD binding confident hh_4bby_A_1::2-92 very confident psy17794 95 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 93.46::3-86 PF02913::FAD-oxidase_C 98.59::1-86 GO:0071949::FAD binding confident hh_4bby_A_1::2-92 very confident psy1203 95 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident COG3286::Uncharacterized protein conserved in archaea [Function unknown] 93.46::3-86 PF02913::FAD-oxidase_C 98.59::1-86 GO:0071949::FAD binding confident hh_4bby_A_1::2-92 very confident psy15189 150 Q8IPK4::Glycosyltransferase 25 family member ::::Drosophila melanogaster (taxid: 7227) confident COG3306::Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane] 99.94::8-139 PF01755::Glyco_transf_25 99.97::4-134 GO:0007155::cell adhesion confident hh_2j0a_A_1::27-52,56-66,72-139 portable psy8614 199 P16233::Pancreatic triacylglycerol lipase ::::Homo sapiens (taxid: 9606) portable COG3319::Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism] 94.86::15-54 PF00151::Lipase 100.00::3-198 GO:0046503::glycerolipid catabolic process confident hh_1bu8_A_1::4-38,42-59,62-149,155-199 very confident psy3027 300 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 98.86::3-131 PF03015::Sterile 99.97::163-256 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::4-52,58-101,105-106,108-134 confident psy5825 596 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::227-539 PF07993::NAD_binding_4 100.00::225-486 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_4dqv_A_1::237-269,271-317,319-341,343-367,388-399,401-439,442-497,512-542 very confident psy17241 93 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 99.46::7-88 PF07993::NAD_binding_4 99.62::22-90 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident rp_4dqv_A_1::11-64,66-87 confident psy4557 958 P69936::NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG ::Catalyzes the NADP-dependent oxidation of L-allo-threonine and L-serine.::Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::320-677 PF07993::NAD_binding_4 100.00::324-563 GO:0031090::organelle membrane confident hh_3a28_C_1::715-939,941-951 very confident psy11862 152 A1ZAI5::Putative fatty acyl-CoA reductase CG5065 ::Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.::Drosophila melanogaster (taxid: 7227) confident COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 99.85::11-152 PF07993::NAD_binding_4 99.88::15-152 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::7-35,39-117,119-142,144-152 very confident psy14522 298 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 99.93::130-297 PF07993::NAD_binding_4 99.92::134-297 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::127-154,158-236,238-296 very confident psy16528 82 A1ZAI5::Putative fatty acyl-CoA reductase CG5065 ::Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols.::Drosophila melanogaster (taxid: 7227) confident COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 98.73::27-77 PF07993::NAD_binding_4 98.84::31-75 GO:0055114::oxidation-reduction process confident hh_4dqv_A_1::24-51,55-73 very confident psy16252 545 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) confident COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::98-407 PF07993::NAD_binding_4 100.00::102-365 GO:0055114::oxidation-reduction process confident hh_4dqv_A_1::95-196,198-221,223-246,268-319,321-326,328-374,378-408 very confident psy6053 614 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) confident COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::103-418 PF07993::NAD_binding_4 100.00::107-379 GO:0055114::oxidation-reduction process confident hh_4dqv_A_1::99-127,129-166,168-210,212-234,236-262,283-333,335-337,340-419,421-424 very confident psy17490 67 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 99.03::14-64 PF07993::NAD_binding_4 99.00::18-62 GO:0055114::oxidation-reduction process confident hh_4dqv_A_1::11-60 very confident psy13684 298 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 99.90::114-282 PF07993::NAD_binding_4 99.88::118-282 GO:0080019::fatty-acyl-CoA reductase (alcohol-forming) activity confident hh_4dqv_A_1::110-220,222-245,247-283 very confident psy17489 177 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable COG3320::Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 99.79::37-177 PF07993::NAD_binding_4 99.83::41-177 GO:0080019::fatty-acyl-CoA reductase (alcohol-forming) activity confident hh_4dqv_A_1::33-60,64-143,145-168,170-177 very confident psy11396 829 Q05470::Polyketide synthase PksL ::Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.::Bacillus subtilis (strain 168) (taxid: 224308) confident COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::115-613 PF00109::ketoacyl-synt 100.00::115-362 GO:0005576::extracellular region confident hh_2vx2_A_1::582-700,702-790,792-807 very confident psy1759 5553 A4G3W7::Serine--tRNA ligase ::Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec).::Herminiimonas arsenicoxydans (taxid: 204773) confident COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::1115-1718 PF00109::ketoacyl-synt 100.00::1116-1364 GO:0005829::cytosol confident hh_2dq3_A_1::5118-5175,5179-5296,5298-5332,5343-5538,5540-5544 very confident psy11963 172 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) confident COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 99.95::14-171 PF00109::ketoacyl-synt 99.73::15-171 GO:0005829::cytosol confident hh_3hhd_A_1::13-27,33-37,40-54,56-60,62-171 very confident psy11395 831 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::14-614 PF00109::ketoacyl-synt 100.00::13-260 GO:0005829::cytosol confident hh_1tqy_B_1::5-27,29-49,52-58,67-76,80-85,87-199,201-282,285-290,292-338,351-402,407-415,423-447 very confident psy616 1152 P40872::Polyketide synthase PksM ::Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::631-1143 PF00109::ketoacyl-synt 100.00::631-873 GO:0005829::cytosol confident hh_3o04_A_1::630-666,669-675,687-694,698-705,707-953,957-1009,1014-1021,1027-1051 very confident psy613 545 Q7TXL9::Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB ::Involved in the elongation of either C22-24 fatty acids or p-hydroxyphenylalkanoic acids by the addition of malonyl-CoA and methylmalonyl-CoA extender units to yield phthiocerol and phenolphthiocerol derivatives, respectively.::Mycobacterium bovis (taxid: 1765) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::13-541 PF00109::ketoacyl-synt 100.00::13-261 GO:0005829::cytosol confident hh_1e5m_A_1::12-48,51-55,67-78,82-86,88-341,351-403,408-416,423-445 very confident psy612 1005 Q869W9::Probable polyketide synthase 16 ::Probable polyketide synthase.::Dictyostelium discoideum (taxid: 44689) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::463-1004 PF00109::ketoacyl-synt 100.00::463-705 GO:0005829::cytosol confident hh_1e5m_A_1::463-498,501-505,517-527,531-536,538-785,789-840,845-854,860-882 very confident psy615 962 Q869W9::Probable polyketide synthase 16 ::Probable polyketide synthase.::Dictyostelium discoideum (taxid: 44689) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::463-961 PF00109::ketoacyl-synt 100.00::463-705 GO:0005829::cytosol confident hh_3o04_A_1::463-498,501-507,519-525,529-537,539-785,789-841,846-853,859-883 very confident psy4744 270 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::2-270 PF00109::ketoacyl-synt 100.00::2-211 GO:0044237::cellular metabolic process confident hh_3hhd_A_1::2-270 very confident psy5082 358 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::25-333 PF00698::Acyl_transf_1 100.00::27-246 GO:0005811::lipid particle confident hh_3im8_A_1::24-61,65-72,74-75,77-210 very confident psy9440 521 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::4-451 PF00698::Acyl_transf_1 100.00::62-264 GO:0005811::lipid particle confident hh_3hhd_A_1::25-41,43-43,48-363,368-399 very confident psy1120 883 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) confident COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::33-881 PF00698::Acyl_transf_1 100.00::463-794 GO:0005829::cytosol confident hh_3hhd_A_1::32-74,77-446,449-657,661-661,664-667,672-678,684-880 very confident psy494 207 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 99.91::1-203 PF00698::Acyl_transf_1 99.96::1-167 GO:0044444::cytoplasmic part confident hh_2vz8_A_1::1-56,58-133,135-203 very confident psy8296 700 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::25-532 PF00698::Acyl_transf_1 100.00::116-447 GO:0044444::cytoplasmic part confident hh_3ezo_A_1::109-150,154-183,198-315,317-340,343-361,366-414 very confident psy11500 387 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::5-386 PF00698::Acyl_transf_1 100.00::7-298 GO:0044444::cytoplasmic part confident hh_3hhd_A_1::3-121,124-265,267-339,341-385 very confident psy2342 4468 O31782::Polyketide synthase PksN ::Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::924-1591 PF00743::FMO-like 100.00::315-757 GO:0004497::monooxygenase activity confident hh_4a9w_A_1::314-356,363-408,411-435,437-503,505-533,537-537,551-555,561-564,566-689 very confident psy9441 418 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable COG3321::Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] 99.95::2-348 PF14765::PS-DH 99.93::189-407 GO:0005811::lipid particle confident hh_3hhd_A_1::1-13,15-244,249-259,261-271,276-296 very confident psy18055 95 P44638::Lactoylglutathione lyase ::Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) confident COG3324::Predicted enzyme related to lactoylglutathione lyase [General function prediction only] 99.53::1-95 PF13669::Glyoxalase_4 99.70::2-93 GO:0005829::cytosol confident hh_2za0_A_1::1-94 very confident psy4440 189 Q9W5U2::Probable chitinase 3 ::::Drosophila melanogaster (taxid: 7227) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 99.91::1-153 PF00704::Glyco_hydro_18 99.91::1-186 GO:0004568::chitinase activity confident hh_4ay1_A_1::1-36,61-96,113-152,154-187 very confident psy13760 242 P30922::Chitinase-3-like protein 1 ::Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.::Bos taurus (taxid: 9913) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 99.95::4-201 PF00704::Glyco_hydro_18 99.92::6-177 GO:0005576::extracellular region confident hh_4ay1_A_1::5-40,42-73,77-106,117-125,127-133,143-200 very confident psy11626 596 P30922::Chitinase-3-like protein 1 ::Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.::Bos taurus (taxid: 9913) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::19-595 PF00704::Glyco_hydro_18 100.00::20-574 GO:0005576::extracellular region confident hh_1itx_A_1::18-33,37-45,48-111,115-160,178-179,182-207,362-362,364-408,411-466,468-472,474-482,485-503,511-522,524-530,538-576,585-595 very confident psy13762 190 Q13231::Chitotriosidase-1 ::Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens. Isoform 3 has no enzymatic activity.::Homo sapiens (taxid: 9606) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::35-189 PF00704::Glyco_hydro_18 99.92::41-190 GO:0008061::chitin binding confident hh_4ay1_A_1::40-68,71-85,88-95,97-97,104-132,135-146,150-171,174-189 very confident psy5813 226 Q5RBP6::Chitinase-3-like protein 1 ::Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment.::Pongo abelii (taxid: 9601) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::55-225 PF00704::Glyco_hydro_18 100.00::57-225 GO:0008061::chitin binding confident hh_4ay1_A_1::52-92,95-136,138-171,174-176,178-226 very confident psy4449 2417 Q62010::Oviduct-specific glycoprotein ::Binds to oocyte zona pellucida in vivo. May play a role in the fertilization process and/or early embryonic development.::Mus musculus (taxid: 10090) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::376-812 PF00704::Glyco_hydro_18 100.00::1711-2056 GO:0008061::chitin binding confident hh_4ay1_A_1::1710-1758,1761-1762,1766-1794,1796-1836,1847-1966,1968-2000,2003-2013,2015-2079 very confident psy5903 122 Q6RY07::Acidic mammalian chitinase ::Degrades chitin and chitotriose. May participate in the defense against nematodes, fungi and other pathogens. Plays a role in T-helper cell type 2 (Th2) immune response. Contributes to the response to IL-13 and inflammation in response to IL-13. Stimulates chemokine production by pulmonary epithelial cells. Protects lung epithelial cells against apoptosis and promotes phosphorylation of AKT1. Its function in the inflammatory response and in protecting cells against apoptosis is inhibited by allosamidin, suggesting that the function of this protein depends on carbohydrate binding.::Rattus norvegicus (taxid: 10116) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 99.81::17-112 PF00704::Glyco_hydro_18 99.40::22-104 GO:0008061::chitin binding confident hh_1w9p_A_1::19-35,39-103 very confident psy1033 67 Q95M17::Acidic mammalian chitinase ::Degrades chitin and chitotriose. May participate in the defense against nematodes, fungi and other pathogens. Plays a role in T-helper cell type 2 (Th2) immune response. Contributes to the response to IL-13 and inflammation in response to IL-13. Stimulates chemokine production by pulmonary epithelial cells. Protects lung epithelial cells against apoptosis and promotes phosphorylation of AKT1. Its function in the inflammatory response and in protecting cells against apoptosis is inhibited by allosamidin, suggesting that the function of this protein depends on carbohydrate binding.::Bos taurus (taxid: 9913) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 99.08::1-55 PF00704::Glyco_hydro_18 99.17::1-60 GO:0008061::chitin binding confident hh_4ay1_A_1::1-54,56-66 very confident psy13135 996 Q9BZP6::Acidic mammalian chitinase ::Degrades chitin and chitotriose. May participate in the defense against nematodes, fungi and other pathogens. Plays a role in T-helper cell type 2 (Th2) immune response. Contributes to the response to IL-13 and inflammation in response to IL-13. Stimulates chemokine production by pulmonary epithelial cells. Protects lung epithelial cells against apoptosis and promotes phosphorylation of AKT1. Its function in the inflammatory response and in protecting cells against apoptosis is inhibited by allosamidin, suggesting that the function of this protein depends on carbohydrate binding.::Homo sapiens (taxid: 9606) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::372-720 PF00704::Glyco_hydro_18 100.00::377-720 GO:0008061::chitin binding confident hh_4ay1_A_1::377-427,431-501,503-632,634-665,668-725 very confident psy10300 1490 Q9W5U2::Probable chitinase 3 ::::Drosophila melanogaster (taxid: 7227) portable COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::1139-1488 PF00704::Glyco_hydro_18 100.00::124-467 GO:0008061::chitin binding confident hh_1itx_A_1::119-138,142-248,251-291,293-319,321-324,328-394,397-468,474-474,477-487 very confident psy1028 424 Q9D7Q1::Chitotriosidase-1 ::Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens.::Mus musculus (taxid: 10090) confident COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::64-421 PF00704::Glyco_hydro_18 100.00::68-398 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_1itx_A_1::66-191,193-225,227-251,253-253,255-399,408-419 very confident psy14882 743 Q9D7Q1::Chitotriosidase-1 ::Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens.::Mus musculus (taxid: 10090) confident COG3325::ChiA Chitinase [Carbohydrate transport and metabolism] 100.00::25-560 PF00704::Glyco_hydro_18 100.00::28-535 GO:0050896::response to stimulus confident hh_4ay1_A_1::28-77,84-155,157-228,304-341,386-407,450-481,483-545,547-561 very confident psy1550 264 Q9VYA8::Transport and Golgi organization 2 ::May play a role in Golgi organization.::Drosophila melanogaster (taxid: 7227) confident COG3332::Uncharacterized conserved protein [Function unknown] 100.00::6-249 PF05742::NRDE 100.00::7-259 GO:0005829::cytosol confident hh_3gvz_A_1::30-86,89-101,103-103,105-115,118-118,128-143,145-153,155-166,168-170,175-186 portable psy5177 213 Q7Z3K3::Pogo transposable element with ZNF domain ::Plays a role in mitotic cell cycle progression and is involved in kinetochore assembly and mitotic sister chromatid cohesion. Probably through its association with CBX5 plays a role in mitotic chromosome segregation by regulating aurora kinase B/AURKB activation and AURKB and CBX5 dissociation from chromosome arms.::Homo sapiens (taxid: 9606) portable COG3335::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 94.30::85-157 PF03184::DDE_1 100.00::8-198 GO:0005737::cytoplasm confident hh_3hot_A_1::10-57,59-64,87-151,153-168 confident psy16521 201 no hit no match COG3335::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 93.45::36-118 PF03184::DDE_1 99.96::1-136 GO:0005737::cytoplasm confident hh_3hot_A_1::41-104,106-122 portable psy9122 169 Q8K114::Integrator complex subunit 9 ::Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes.::Mus musculus (taxid: 10090) confident COG3335::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 97.07::11-77 PF13358::DDE_3 99.41::9-70 GO:0034472::snRNA 3'-end processing confident hh_3hot_A_1::10-86 confident psy12959 239 P23280::Carbonic anhydrase 6 ::Reversible hydration of carbon dioxide. Its role in saliva is unknown.::Homo sapiens (taxid: 9606) portable COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 100.00::10-237 PF00194::Carb_anhydrase 100.00::8-238 GO:0005794::Golgi apparatus confident hh_1rj5_A_1::45-48,51-121,166-171,173-186,188-238 very confident psy3903 112 Q18932::Putative carbonic anhydrase-like protein 2 ::::Caenorhabditis elegans (taxid: 6239) portable COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 99.96::9-97 PF00194::Carb_anhydrase 100.00::4-98 GO:0005794::Golgi apparatus confident hh_3ml5_A_1::3-99 very confident psy11192 180 Q5R665::Carbonic anhydrase-related protein 11 ::Does not have a catalytic activity.::Pongo abelii (taxid: 9601) portable COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 100.00::2-168 PF00194::Carb_anhydrase 100.00::2-177 GO:0005794::Golgi apparatus confident hh_3ml5_A_1::2-16,20-21,23-76,78-151,153-177 very confident psy14180 131 Q92051::Carbonic anhydrase ::Reversible hydration of carbon dioxide.::Danio rerio (taxid: 7955) confident COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 99.97::2-131 PF00194::Carb_anhydrase 100.00::2-131 GO:0005794::Golgi apparatus confident hh_3ml5_A_1::2-25,28-131 very confident psy81 120 Q9ERQ8::Carbonic anhydrase 7 ::Reversible hydration of carbon dioxide.::Mus musculus (taxid: 10090) confident COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 99.87::16-119 PF00194::Carb_anhydrase 100.00::16-119 GO:0005794::Golgi apparatus confident hh_3ml5_A_1::6-11,16-24,26-119 very confident psy16207 258 Q5R665::Carbonic anhydrase-related protein 11 ::Does not have a catalytic activity.::Pongo abelii (taxid: 9601) confident COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 100.00::1-235 PF00194::Carb_anhydrase 100.00::1-236 GO:0005829::cytosol confident hh_3fe4_A_1::1-7,11-15,17-64,69-75,77-117,119-210,214-240 very confident psy16086 139 Q27504::Putative carbonic anhydrase 3 ::Reversible hydration of carbon dioxide.::Caenorhabditis elegans (taxid: 6239) portable COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 100.00::1-138 PF00194::Carb_anhydrase 100.00::1-139 GO:0050896::response to stimulus confident hh_3fe4_A_1::2-72,75-139 very confident psy6463 259 Q27504::Putative carbonic anhydrase 3 ::Reversible hydration of carbon dioxide.::Caenorhabditis elegans (taxid: 6239) portable COG3338::Cah Carbonic anhydrase [Inorganic ion transport and metabolism] 100.00::49-229 PF00194::Carb_anhydrase 100.00::52-231 GO:0050896::response to stimulus confident hh_3fe4_A_1::50-55,57-121,124-132,134-232 very confident psy12268 410 O01761::Muscle M-line assembly protein unc-89 ::Structural component of the muscle M-line. Myofilament lattice assembly begins with positional cues laid down in the basement membrane and muscle cell membrane. UNC-89 responds to these signals, localizes, and then participates in assembling an M-line.::Caenorhabditis elegans (taxid: 6239) portable COG3344::Retron-type reverse transcriptase [DNA replication, recombination, and repair] 96.74::174-265 PF00078::RVT_1 99.79::172-335 GO:0016020::membrane confident no hit no match psy1868 108 Q90744::Alpha-N-acetylgalactosaminidase ::Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.::Gallus gallus (taxid: 9031) confident COG3345::GalA Alpha-galactosidase [Carbohydrate transport and metabolism] 99.59::20-107 PF02065::Melibiase 99.83::20-108 GO:0005576::extracellular region confident hh_3hg3_A_1::18-108 very confident psy10252 85 Q90744::Alpha-N-acetylgalactosaminidase ::Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.::Gallus gallus (taxid: 9031) confident COG3345::GalA Alpha-galactosidase [Carbohydrate transport and metabolism] 99.67::1-85 PF02065::Melibiase 99.86::1-85 GO:0005576::extracellular region confident hh_1uas_A_1::1-12,23-85 very confident psy6552 254 Q5U3V9::Vacuolar-sorting protein SNF8 ::Component of the ESCRT-II complex, which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. The MVB pathway mediates delivery of transmembrane proteins into the lumen of the lysosome for degradation. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex.::Danio rerio (taxid: 7955) very confident COG3355::Predicted transcriptional regulator [Transcription] 94.31::177-232 PF04157::EAP30 100.00::5-228 GO:0005667::transcription factor complex very confident hh_3cuq_A_1::24-134,137-164,166-189,192-249 very confident psy10773 290 Q9VA70::Neutral ceramidase ::Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid at an optimal pH of 6.5-7.5. Acts as a key regulator of sphingolipid signaling metabolites by generating sphingosine at the cell surface. Regulates synaptic vesicle exocytosis and trafficking by controlling presynaptic terminal sphingolipid composition.::Drosophila melanogaster (taxid: 7227) confident COG3356::Predicted membrane protein [Function unknown] 94.66::1-70 PF04734::Ceramidase_alk 100.00::1-288 GO:0008152::metabolic process confident hh_2zws_A_1::1-85,88-201,203-289 very confident psy4884 116 Q29BX8::CDGSH iron-sulfur domain-containing protein 2 homolog ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) portable COG3369::Zinc finger domain containing protein (CDGSH-type) [Function unknown] 99.29::76-103 PF09360::zf-CDGSH 99.57::61-98 GO:0005741::mitochondrial outer membrane confident hh_3fnv_A_1::45-115 very confident psy4887 100 Q3ZBU2::CDGSH iron-sulfur domain-containing protein 1 ::Plays a key role in regulating maximal capacity for electron transport and oxidative phosphorylation. May be involved in Fe-S cluster shuttling and/or in redox reactions.::Bos taurus (taxid: 9913) confident COG3369::Zinc finger domain containing protein (CDGSH-type) [Function unknown] 99.35::58-85 PF09360::zf-CDGSH 99.60::43-80 GO:0005741::mitochondrial outer membrane confident bp_3fnv_A_1::37-97 very confident psy4880 137 Q29BX8::CDGSH iron-sulfur domain-containing protein 2 homolog ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) portable COG3369::Zinc finger domain containing protein (CDGSH-type) [Function unknown] 99.74::42-102 PF09360::zf-CDGSH 99.64::41-96 GO:0031090::organelle membrane confident hh_3fnv_A_1::49-59,61-115 very confident psy4889 131 C4A0P0::CDGSH iron-sulfur domain-containing protein 2 homolog B ::::Branchiostoma floridae (taxid: 7739) confident COG3369::Zinc finger domain containing protein (CDGSH-type) [Function unknown] 99.27::61-88 PF09360::zf-CDGSH 99.53::45-83 GO:0043234::protein complex confident hh_3fnv_A_1::26-49,51-103 very confident psy4888 273 C4A0P0::CDGSH iron-sulfur domain-containing protein 2 homolog B ::::Branchiostoma floridae (taxid: 7739) confident COG3369::Zinc finger domain containing protein (CDGSH-type) [Function unknown] 99.00::179-228 PF09360::zf-CDGSH 99.38::132-169 GO:0043234::protein complex confident hh_3ew0_A_2::161-170,177-242 very confident psy12489 365 Q5U2W9::Renalase ::Probable FAD-dependent amine oxidase secreted by the kidney, which circulates in blood and modulates cardiac function and systemic blood pressure. Degrades catecholamines such as dopamine, norepinephrine and epinephrine in vitro (By similarity). Lowers blood pressure in vivo by decreasing cardiac contractility and heart rate and preventing a compensatory increase in peripheral vascular tone, suggesting a causal link to the increased plasma catecholamine and heightened cardiovascular risk. High concentrations of catecholamines activate plasma renalase and promotes its secretion and synthesis.::Rattus norvegicus (taxid: 10116) confident COG3380::Predicted NAD/FAD-dependent oxidoreductase [General function prediction only] 100.00::1-347 PF01593::Amino_oxidase 99.96::110-345 GO:0005576::extracellular region confident hh_3qj4_A_1::1-24,29-99,101-125,127-142,145-179,182-264,267-325,327-346 very confident psy5223 2777 A8F0M0::NADH-quinone oxidoreductase subunit F ::NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.::Rickettsia massiliae (strain Mtu5) (taxid: 416276) confident COG3383::Uncharacterized anaerobic dehydrogenase [General function prediction only] 100.00::529-1299 PF00146::NADHdh 100.00::2310-2631 GO:0006979::response to oxidative stress confident hh_3i9v_1_1::166-187,189-425,428-446,448-566 very confident psy14128 393 Q94511::NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). This is the largest subunit of complex I and it is a component of the iron-sulfur (IP) fragment of the enzyme. It may form part of the active site crevice where NADH is oxidized.::Drosophila melanogaster (taxid: 7227) confident COG3383::Uncharacterized anaerobic dehydrogenase [General function prediction only] 100.00::16-369 PF00384::Molybdopterin 99.96::75-355 GO:0005739::mitochondrion confident hh_3i9v_3_1::67-72,74-107,110-151,158-158,160-179,181-265,269-349,353-361,363-368 very confident psy11935 1334 Q91VD9::NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial ::Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). This is the largest subunit of complex I and it is a component of the iron-sulfur (IP) fragment of the enzyme. It may form part of the active site crevice where NADH is oxidized.::Mus musculus (taxid: 10090) confident COG3383::Uncharacterized anaerobic dehydrogenase [General function prediction only] 100.00::662-1282 PF00384::Molybdopterin 100.00::958-1280 GO:0005758::mitochondrial intermembrane space confident hh_3i9v_3_1::664-759,782-791,804-806,809-813,828-833,840-866,868-967,969-1031,1039-1058,1060-1141,1143-1152,1162-1191,1193-1206,1211-1316 very confident psy13634 242 O75581::Low-density lipoprotein receptor-related protein 6 ::Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Cell-surface coreceptor of Wnt/beta-catenin signaling, which plays a pivotal role in bone formation. The Wnt-induced Fzd/LRP6 coreceptor complex recruits DVL1 polymers to the plasma membrane which, in turn, recruits the AXIN1/GSK3B-complex to the cell surface promoting the formation of signalsomes and inhibiting AXIN1/GSK3-mediated phosphorylation and destruction of beta-catenin. Required for posterior patterning of the epiblast during gastrulation.::Homo sapiens (taxid: 9606) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 97.85::10-105 PF00058::Ldl_recept_b 99.32::1-40 GO:0006355::regulation of transcription, DNA-dependent confident hh_3v64_C_1::1-7,10-112,114-151,157-166,168-175 very confident psy4903 73 Q04833::Low-density lipoprotein receptor-related protein ::May act as a receptor for the endocytosis of extracellular ligands such as chylomicron remnants, protease-inhibitor complexes and vitellogenin.::Caenorhabditis elegans (taxid: 6239) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 97.00::5-64 PF00058::Ldl_recept_b 99.58::18-56 GO:0016324::apical plasma membrane confident hh_1npe_A_2::6-72 very confident psy959 109 Q04833::Low-density lipoprotein receptor-related protein ::May act as a receptor for the endocytosis of extracellular ligands such as chylomicron remnants, protease-inhibitor complexes and vitellogenin.::Caenorhabditis elegans (taxid: 6239) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 98.42::10-105 PF00058::Ldl_recept_b 99.56::33-77 GO:0016324::apical plasma membrane confident hh_3v64_C_1::3-42,46-108 very confident psy17326 264 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 97.24::5-105 PF00058::Ldl_recept_b 99.06::27-80 GO:0030111::regulation of Wnt receptor signaling pathway confident hh_3v64_C_1::1-51,64-67,70-146,150-161,163-171 very confident psy951 428 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 97.93::323-407 PF00058::Ldl_recept_b 99.25::1-40 GO:0045177::apical part of cell confident hh_3s94_A_1::1-43,45-72,75-133,135-163,165-169,172-179,295-356,360-408,413-425 very confident psy4900 485 Q07954::Prolow-density lipoprotein receptor-related protein 1 ::Functions as a receptor for Pseudomonas aeruginosa exotoxin A.::Homo sapiens (taxid: 9606) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 97.52::378-480 PF00058::Ldl_recept_b 99.24::413-451 GO:0071813::lipoprotein particle binding confident hh_1n7d_A_1::10-19,22-50,54-67,69-145,152-205,207-217,262-263,265-277,283-314,319-384,389-481 very confident psy11725 347 P09957::Protein yellow ::Controls the pigmentation pattern of the adult cuticle and larval mouth parts.::Drosophila melanogaster (taxid: 7227) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 97.76::194-323 PF03022::MRJP 100.00::3-347 GO:0005576::extracellular region confident hh_3q6k_A_1::3-49,82-91,95-95,106-118,120-121,136-139,144-152,176-189,191-233,240-297,299-347 very confident psy11539 530 P62407::Protein yellow ::Controls the pigmentation pattern of the adult cuticle and larval mouth parts.::Drosophila simulans (taxid: 7240) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.02::242-524 PF03022::MRJP 100.00::240-528 GO:0005576::extracellular region confident hh_3q6k_A_1::148-160,170-228,234-349,351-377,407-436,444-486,488-502,504-521,524-528 very confident psy731 494 no hit no match COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 98.90::134-462 PF03022::MRJP 100.00::127-491 GO:0005576::extracellular region confident no hit no match psy11781 1228 no hit no match COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 98.77::417-756 PF03022::MRJP 100.00::28-344 GO:0005576::extracellular region confident hh_3q6k_A_2::826-838,848-906,912-1027,1029-1057,1086-1113,1121-1163,1165-1179,1181-1227 very confident psy13486 91 P09957::Protein yellow ::Controls the pigmentation pattern of the adult cuticle and larval mouth parts.::Drosophila melanogaster (taxid: 7227) confident COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 90.19::2-82 PF03022::MRJP 99.97::1-91 GO:0019438::aromatic compound biosynthetic process confident hh_3q6k_A_1::1-38,40-91 very confident psy4774 120 Q3T0E5::Adipocyte plasma membrane-associated protein ::Exhibits strong arylesterase activity with beta-naphthyl acetate and phenyl acetate. May play a role in adipocyte differentiation.::Bos taurus (taxid: 9913) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.19::9-113 PF03088::Str_synth 99.52::63-115 GO:0005773::vacuole confident hh_2fp8_A_1::10-49,53-113 very confident psy14258 440 Q07954::Prolow-density lipoprotein receptor-related protein 1 ::Functions as a receptor for Pseudomonas aeruginosa exotoxin A.::Homo sapiens (taxid: 9606) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.48::166-437 PF08450::SGL 99.81::83-309 GO:0005737::cytoplasm confident hh_3v64_C_2::139-142,144-168,170-193,196-258,260-289,341-342,344-345,348-407,410-430,432-438 very confident psy5768 652 Q07954::Prolow-density lipoprotein receptor-related protein 1 ::Functions as a receptor for Pseudomonas aeruginosa exotoxin A.::Homo sapiens (taxid: 9606) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.33::316-528 PF08450::SGL 99.75::316-538 GO:0005737::cytoplasm confident hh_3v64_C_1::237-241,243-294,296-301,306-307,310-389,392-394,396-424,426-567,569-579,581-588 very confident psy4773 160 Q3T0E5::Adipocyte plasma membrane-associated protein ::Exhibits strong arylesterase activity with beta-naphthyl acetate and phenyl acetate. May play a role in adipocyte differentiation.::Bos taurus (taxid: 9913) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.11::2-150 PF08450::SGL 99.00::3-148 GO:0005783::endoplasmic reticulum confident hh_2fp8_A_1::3-29,31-33,35-55,59-59,61-61,69-69,80-80,104-159 very confident psy4771 337 Q3T0E5::Adipocyte plasma membrane-associated protein ::Exhibits strong arylesterase activity with beta-naphthyl acetate and phenyl acetate. May play a role in adipocyte differentiation.::Bos taurus (taxid: 9913) confident COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.95::45-312 PF08450::SGL 99.94::65-313 GO:0005783::endoplasmic reticulum confident rp_2fp8_A_1::45-52,54-148,152-168,200-289,291-293,295-314 very confident psy8782 482 O61307::Teneurin-m ::Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-a to organize neuromuscular synapses. Function in olfactory synaptic partner matching; promotes homophilic cell adhesion between pre-synaptic olfactory receptor neurons (ORN) axons and post-synaptic projection neurons (PN) dendrites partner in the developing antennal lobe to form stable connections. Also required for peripheral axon growth cone guidance and target recognition of motor neurons.::Drosophila melanogaster (taxid: 7227) confident COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.46::122-376 PF08450::SGL 99.85::122-394 GO:0005887::integral to plasma membrane confident hh_1rwi_B_2::118-157,173-186,188-210,221-261,264-277,279-297,305-313,334-365 very confident psy5806 1332 O75096::Low-density lipoprotein receptor-related protein 4 ::Mediates SOST-dependent inhibition of bone formation. Functions as a specific facilitator of SOST-mediated inhibition of Wnt signaling. Plays a key role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Directly binds AGRIN and recruits it to the MUSK signaling complex. Mediates the AGRIN-induced phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane. Alternatively, may be involved in the negative regulation of the canonical Wnt signaling pathway, being able to antagonize the LRP6-mediated activation of this pathway. More generally, has been proposed to function as a cell surface endocytic receptor binding and internalizing extracellular ligands for degradation by lysosomes.::Homo sapiens (taxid: 9606) confident COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.40::1047-1258 PF08450::SGL 99.74::1047-1279 GO:0006355::regulation of transcription, DNA-dependent confident bp_3v65_B_1::162-420 very confident psy17325 461 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.57::143-444 PF08450::SGL 99.86::151-441 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_1ijq_A_2::163-168,171-188,190-204,207-212,214-259,294-330,342-397,400-414,424-447 very confident psy6572 1416 Q07954::Prolow-density lipoprotein receptor-related protein 1 ::Functions as a receptor for Pseudomonas aeruginosa exotoxin A.::Homo sapiens (taxid: 9606) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.08::563-781 PF08450::SGL 99.64::569-794 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_3v64_C_1::496-537,539-589,592-737,744-782,784-800,802-823,825-835,837-845 very confident psy8875 734 P98166::Very low-density lipoprotein receptor ::Binds VLDL and transports it into cells by endocytosis. In order to be internalized, the receptor-ligand complexes must first cluster into clathrin-coated pits. Binding to Reelin induces tyrosine phosphorylation of Dab1 and modulation of Tau phosphorylation.::Rattus norvegicus (taxid: 10116) confident COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.54::502-718 PF08450::SGL 99.81::505-728 GO:0030229::very-low-density lipoprotein particle receptor activity confident hh_3v64_C_1::430-466,468-534,536-674,677-718,721-728 very confident psy6570 713 Q07954::Prolow-density lipoprotein receptor-related protein 1 ::Functions as a receptor for Pseudomonas aeruginosa exotoxin A.::Homo sapiens (taxid: 9606) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.42::1-209 PF08450::SGL 99.75::1-210 GO:0043229::intracellular organelle confident hh_3v64_C_1::1-45,49-156,159-216,218-228,231-250 very confident psy952 573 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.58::41-258 PF08450::SGL 99.84::47-268 GO:0043234::protein complex confident bp_3v65_B_1::5-14,16-164,167-215,217-273 very confident psy5751 232 P10493::Nidogen-1 ::Sulfated glycoprotein widely distributed in basement membranes and tightly associated with laminin. Also binds to collagen IV and perlecan. It probably has a role in cell-extracellular matrix interactions.::Mus musculus (taxid: 10090) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.86::2-217 PF08450::SGL 99.95::1-226 GO:0043234::protein complex confident hh_3v64_C_1::1-22,24-108,110-130,132-211,215-229 very confident psy14257 841 Q9NZR2::Low-density lipoprotein receptor-related protein 1B ::Potential cell surface proteins that bind and internalize ligands in the process of receptor-mediated endocytosis.::Homo sapiens (taxid: 9606) portable COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.41::342-576 PF08450::SGL 99.74::252-555 GO:0043234::protein complex confident hh_3v64_C_1::172-188,191-214,218-262,265-284,288-308,413-465,467-485,491-535,538-611,613-623,625-632 very confident psy13635 357 O75581::Low-density lipoprotein receptor-related protein 6 ::Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Cell-surface coreceptor of Wnt/beta-catenin signaling, which plays a pivotal role in bone formation. The Wnt-induced Fzd/LRP6 coreceptor complex recruits DVL1 polymers to the plasma membrane which, in turn, recruits the AXIN1/GSK3B-complex to the cell surface promoting the formation of signalsomes and inhibiting AXIN1/GSK3-mediated phosphorylation and destruction of beta-catenin. Required for posterior patterning of the epiblast during gastrulation.::Homo sapiens (taxid: 9606) confident COG3386::Gluconolactonase [Carbohydrate transport and metabolism] 99.73::69-328 PF08450::SGL 99.91::73-324 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_3s94_A_1::38-104,107-241,243-337,339-355 very confident psy12312 1045 P34335::Probable phosphorylase b kinase regulatory subunit alpha ::Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. The alpha chain may bind calmodulin.::Caenorhabditis elegans (taxid: 6239) confident COG3387::SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism] 100.00::11-382 PF00723::Glyco_hydro_15 100.00::5-708 GO:0004689::phosphorylase kinase activity confident hh_1lf6_A_1::28-57,72-82,84-88,94-116,125-153,161-186,188-201,204-237,239-268,270-271,274-278,285-308,311-322,327-340,355-380 very confident psy13063 316 Q9CUS9::Signal peptide peptidase-like 3 ::Intramembrane-cleaving aspartic protease (I-CLiP) that cleaves type II membrane signal peptides in the hydrophobic plane of the membrane.::Mus musculus (taxid: 10090) confident COG3389::Uncharacterized protein conserved in archaea [Function unknown] 99.44::64-292 PF04258::Peptidase_A22B 100.00::40-302 GO:0006465::signal peptide processing confident hh_4hyg_A_1::49-91,93-110,117-129,151-163,167-174,190-227,235-235,242-246,248-267,269-298 confident psy980 587 Q9D8V0::Minor histocompatibility antigen H13 ::Catalyzes intramembrane proteolysis of some signal peptides after they have been cleaved from a preprotein, resulting in the release of the fragment from the ER membrane into the cytoplasm. Required to generate lymphocyte cell surface (HLA-E) epitopes derived from MHC class I signal peptides. Involved in the intramembrane cleavage of the integral membrane protein PSEN1 (By similarity). May play a role in graft rejection.::Mus musculus (taxid: 10090) confident COG3389::Uncharacterized protein conserved in archaea [Function unknown] 99.32::77-244 PF04258::Peptidase_A22B 100.00::4-254 GO:0006465::signal peptide processing confident hh_4hyg_A_1::72-114,116-198,200-218,221-250 confident psy948 1576 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable COG3391::Uncharacterized conserved protein [Function unknown] 97.92::1195-1548 PF08450::SGL 99.10::1197-1549 GO:0005886::plasma membrane confident hh_3v65_B_2::1321-1332,1335-1348,1350-1360,1362-1392,1394-1467,1476-1501,1508-1576 very confident psy950 407 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable COG3391::Uncharacterized conserved protein [Function unknown] 98.94::33-364 PF08450::SGL 99.52::35-363 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_4a0p_A_1::14-73,75-148,150-150,153-177,180-186,188-202,209-284,286-303,305-325,327-370,374-397 very confident psy5792 377 Q07954::Prolow-density lipoprotein receptor-related protein 1 ::Functions as a receptor for Pseudomonas aeruginosa exotoxin A.::Homo sapiens (taxid: 9606) portable COG3391::Uncharacterized conserved protein [Function unknown] 99.35::31-355 PF08450::SGL 99.76::61-341 GO:0043234::protein complex confident hh_3v64_C_1::118-120,122-159,162-172,178-224,232-341,343-361,363-372 very confident psy14533 209 Q9VS29::Down syndrome cell adhesion molecule-like protein Dscam2 ::Cell adhesion molecule.::Drosophila melanogaster (taxid: 7227) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 97.77::12-204 PF00041::fn3 99.40::57-146 GO:0005509::calcium ion binding confident hh_1x5h_A_1::37-97,100-102,106-160,162-166 very confident psy14886 505 Q9VN14::Contactin ::Required for organization of septate junctions and paracellular barrier functions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion.::Drosophila melanogaster (taxid: 7227) confident COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 93.16::294-479 PF00041::fn3 99.41::389-477 GO:0005919::pleated septate junction confident hh_2jll_A_1::98-184,186-210,213-230,234-331,341-349,351-376,378-391,393-409,412-440,442-443,446-479,481-486 very confident psy14887 238 Q9VN14::Contactin ::Required for organization of septate junctions and paracellular barrier functions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion.::Drosophila melanogaster (taxid: 7227) confident COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 96.62::16-197 PF00041::fn3 99.52::108-195 GO:0005919::pleated septate junction confident hh_3p4l_A_1::1-56,59-127,130-197,199-205 very confident psy8774 427 P16621::Tyrosine-protein phosphatase Lar ::Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase). It controls motor axon guidance.::Drosophila melanogaster (taxid: 7227) confident COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 98.52::23-391 PF00041::fn3 99.29::187-301 GO:0030424::axon confident hh_1x5h_A_1::169-229,233-236,264-310 very confident psy241 753 P97798::Neogenin ::May be involved as a regulatory protein in the transition of undifferentiated proliferating cells to their differentiated state. May also function as a cell adhesion molecule in a broad spectrum of embryonic and adult tissues.::Mus musculus (taxid: 10090) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 98.58::271-635 PF00041::fn3 99.33::554-639 GO:0031672::A band confident hh_3t1w_A_1::255-264,269-328,332-337,344-346,348-370,373-436,441-443,450-472,481-542,544-546,551-563,566-577,581-639 very confident psy7040 716 Q23551::Twitchin ::Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.::Caenorhabditis elegans (taxid: 6239) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 97.75::237-510 PF00041::fn3 99.14::56-139 GO:0031672::A band confident rp_3lpw_A_1::219-229,231-274,276-321,325-374,377-420 very confident psy4956 361 Q92752::Tenascin-R ::Neural extracellular matrix (ECM) protein involved in interactions with different cells and matrix components. These interactions can influence cellular behavior by either evoking a stable adhesion and differentiation, or repulsion and inhibition of neurite growth. Binding to cell surface gangliosides inhibits RGD-dependent integrin-mediated cell adhesion and results in an inhibition of PTK2/FAK1 (FAK) phosphorylation and cell detachment. Binding to membrane surface sulfatides results in a oligodendrocyte adhesion and differentiation. Interaction with CNTN1 induces a repulsion of neurons and an inhibition of neurite outgrowth. Interacts with SCN2B may play a crucial role in clustering and regulation of activity of sodium channels at nodes of Ranvier. TNR-linked chondroitin sulfate glycosaminoglycans are involved in the interaction with FN1 and mediate inhibition of cell adhesion and neurite outgrowth. The highly regulated addition of sulfated carbohydrate structure may modulate the adhesive properties of TNR over the course of development and during synapse maintenance.::Homo sapiens (taxid: 9606) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 98.17::23-360 PF00041::fn3 99.32::91-173 GO:0043025::neuronal cell body confident hh_3r8q_A_1::84-113,115-144,146-174,176-206,209-232,237-286,289-305,308-324,326-342,344-360 very confident psy7018 349 Q5ZJP5::Fibronectin type-III domain-containing protein 3a ::::Gallus gallus (taxid: 9031) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 98.05::10-304 PF00041::fn3 99.45::225-307 GO:0044422::organelle part confident hh_1x4x_A_1::218-265,268-322 very confident psy2190 976 P15127::Insulin receptor ::Receptor tyrosine kinase which mediates the pleiotropic actions of insulin. Binding of insulin leads to phosphorylation of several intracellular substrates, including, insulin receptor substrates (IRS1, 2, 3, 4), SHC, GAB1, CBL and other signaling intermediates. Each of these phosphorylated proteins serve as docking proteins for other signaling proteins that contain Src-homology-2 domains (SH2 domain) that specifically recognize different phosphotyrosines residues, including the p85 regulatory subunit of PI3K and SHP2. Phosphorylation of IRSs proteins lead to the activation of two main signaling pathways: the PI3K-AKT/PKB pathway, which is responsible for most of the metabolic actions of insulin, and the Ras-MAPK pathway, which regulates expression of some genes and cooperates with the PI3K pathway to control cell growth and differentiation. Binding of the SH2 domains of PI3K to phosphotyrosines on IRS1 leads to the activation of PI3K and the generation of phosphatidylinositol-(3, 4, 5)-triphosphate (PIP3), a lipid second messenger, which activates several PIP3-dependent serine/threonine kinases, such as PDPK1 and subsequently AKT/PKB. The net effect of this pathway is to produce a translocation of the glucose transporter SLC2A4/GLUT4 from cytoplasmic vesicles to the cell membrane to facilitate glucose transport. Moreover, upon insulin stimulation, activated AKT/PKB is responsible for: anti-apoptotic effect of insulin by inducing phosphorylation of BAD; regulates the expression of gluconeogenic and lipogenic enzymes by controlling the activity of the winged helix or forkhead (FOX) class of transcription factors. Another pathway regulated by PI3K-AKT/PKB activation is mTORC1 signaling pathway which regulates cell growth and metabolism and integrates signals from insulin. AKT mediates insulin-stimulated protein synthesis by phosphorylating TSC2 thereby activating mTORC1 pathway. The Ras/RAF/MAP2K/MAPK pathway is mainly involved in mediating cell growth, survival and cellular differentiation of insulin. Phosphorylated IRS1 recruits GRB2/SOS complex, which triggers the activation of the Ras/RAF/MAP2K/MAPK pathway. In addition to binding insulin, the insulin receptor can bind insulin-like growth factors (IGFI and IGFII). When present in a hybrid receptor with IGF1R, binds IGF1.::Rattus norvegicus (taxid: 10116) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 91.24::598-672 PF00757::Furin-like 99.88::199-360 GO:0051259::protein oligomerization confident hh_1m6b_A_1::55-96,102-122,124-129,132-190,192-203,206-210,216-291,293-296,299-301,323-438,449-470,479-511,514-531 very confident psy8771 904 P16621::Tyrosine-protein phosphatase Lar ::Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase). It controls motor axon guidance.::Drosophila melanogaster (taxid: 7227) confident COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 98.46::511-882 PF07679::I-set 99.31::105-190 GO:0004725::protein tyrosine phosphatase activity confident hh_3t1w_A_1::481-507,510-564,568-580,582-603,647-705,707-711,715-717,719-741,746-764,766-805,807-884 very confident psy12425 591 Q23551::Twitchin ::Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.::Caenorhabditis elegans (taxid: 6239) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 93.53::449-568 PF07679::I-set 99.69::2-85 GO:0005509::calcium ion binding confident rp_3lpw_A_1::89-96,98-176,180-241,244-286 very confident psy12426 616 Q23551::Twitchin ::Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.::Caenorhabditis elegans (taxid: 6239) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 97.17::324-497 PF07679::I-set 99.32::221-306 GO:0005509::calcium ion binding confident hh_2jll_A_1::224-315,317-396,400-413,415-434,436-497 very confident psy12061 626 Q9VN14::Contactin ::Required for organization of septate junctions and paracellular barrier functions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion.::Drosophila melanogaster (taxid: 7227) confident COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 98.25::300-581 PF07679::I-set 99.58::2-77 GO:0005919::pleated septate junction confident hh_2jll_A_1::2-85,87-111,114-129,135-231,241-250,252-277,279-292,294-310,313-341,343-343,346-380,382-385 very confident psy15127 633 G5EBF1::Protein sax-3 ::Required to confine migrating sex myoblasts to the ventral muscle quadrants during their migration through the body and for multiple aspects of sensory, motor, and interneuron axon guidance.::Caenorhabditis elegans (taxid: 6239) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 91.59::417-630 PF07679::I-set 99.50::72-157 GO:0030424::axon confident hh_2rik_A_1::69-160,162-184,186-243,246-284,287-333 very confident psy7042 2245 A2ASS6::Titin ::Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Mus musculus (taxid: 10090) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 95.61::956-1315 PF07679::I-set 99.52::2088-2177 GO:0031674::I band confident rp_3lpw_A_1::277-284,286-364,368-429,432-474 very confident psy3718 543 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 95.75::260-396 PF07679::I-set 99.48::52-139 GO:0044464::cell part confident no hit no match psy11701 745 P20241::Neuroglian ::The long isoform may play a role in neural and glial cell adhesion in the developing embryo. The short isoform may be a more general cell adhesion molecule involved in other tissues and imaginal disk morphogenesis. Vital for embryonic development. Essential for septate junctions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion. Required for the blood-brain barrier formation.::Drosophila melanogaster (taxid: 7227) confident COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 97.30::415-594 PF07679::I-set 99.48::35-122 GO:0048666::neuron development confident hh_2rik_A_1::32-114,116-216,218-305 very confident psy574 977 Q7TPD3::Roundabout homolog 2 ::Receptor for SLIT2, and probably SLIT1, which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development.::Mus musculus (taxid: 10090) portable COG3401::Fibronectin type 3 domain-containing protein [General function prediction only] 95.99::411-726 PF07679::I-set 99.31::6-96 GO:0048699::generation of neurons confident hh_2rik_A_1::2-29,31-86,88-230,236-245,247-266,268-286 very confident psy11141 566 Q54YQ9::Diphosphomevalonate decarboxylase ::Performs the first committed step in the biosynthesis of isoprenes.::Dictyostelium discoideum (taxid: 44689) confident COG3407::MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism] 100.00::68-391 PF00288::GHMP_kinases_N 98.95::156-212 GO:0043231::intracellular membrane-bounded organelle confident hh_1fi4_A_1::71-83,95-218,222-229,239-405,407-440,445-455 very confident psy4875 100 O18381::Paired box protein Pax-6 ::Involved in eye morphogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 95.32::8-65 PF00292::PAX 100.00::3-81 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity very confident bp_1k78_A_1::10-73 very confident psy2182 67 P63016::Paired box protein Pax-6 ::Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters (By similarity). Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains.::Rattus norvegicus (taxid: 10116) confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 96.88::4-58 PF00292::PAX 100.00::2-67 GO:0005730::nucleolus very confident bp_1k78_A_1::7-67 very confident psy15598 258 P23757::Paired box pox-meso protein ::::Drosophila melanogaster (taxid: 7227) confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 99.71::44-164 PF00292::PAX 100.00::31-155 GO:0007501::mesodermal cell fate specification confident rp_1k78_A_1::26-161 very confident psy1898 230 P47239::Paired box protein Pax-7 ::Probable transcription factor. May have a role in myogenesis.::Mus musculus (taxid: 10090) confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 99.73::97-219 PF00292::PAX 100.00::39-208 GO:0007501::mesodermal cell fate specification confident hh_1pdn_C_1::87-187,189-211 very confident psy10745 197 no hit no match COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 96.41::13-84 PF00292::PAX 99.98::2-83 GO:0043234::protein complex confident hh_1pdn_C_1::118-181 very confident psy15513 77 P23760::Paired box protein Pax-3 ::Probable transcription factor associated with development of alveolar rhabdomyosarcoma.::Homo sapiens (taxid: 9606) confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 99.76::4-76 PF00292::PAX 99.95::1-76 GO:0045944::positive regulation of transcription from RNA polymerase II promoter very confident hh_1pdn_C_1::2-75 very confident psy17316 229 no hit no match COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 99.03::116-225 PF01710::HTH_Tnp_IS630 99.20::118-212 GO:0043565::sequence-specific DNA binding confident hh_2cob_A_1::27-76 confident psy13113 286 Q17QR8::Putative nuclease HARBI1 ::Transposase-derived protein that may have nuclease activity (Potential). Does not have transposase activity.::Bos taurus (taxid: 9913) confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 95.14::12-55 PF13359::DDE_Tnp_4 100.00::92-243 GO:0005813::centrosome confident hh_2jn6_A_1::10-54 portable psy672 314 Q17QR8::Putative nuclease HARBI1 ::Transposase-derived protein that may have nuclease activity (Potential). Does not have transposase activity.::Bos taurus (taxid: 9913) confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 93.99::38-82 PF13359::DDE_Tnp_4 100.00::117-266 GO:0005813::centrosome confident hh_2jn6_A_1::37-80 portable psy4300 307 Q17QR8::Putative nuclease HARBI1 ::Transposase-derived protein that may have nuclease activity (Potential). Does not have transposase activity.::Bos taurus (taxid: 9913) portable COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 95.60::29-72 PF13359::DDE_Tnp_4 100.00::112-269 GO:0005813::centrosome confident hh_2jn6_A_1::27-71 portable psy15697 332 Q8BR93::Putative nuclease HARBI1 ::Transposase-derived protein that may have nuclease activity (Potential). Does not have transposase activity.::Mus musculus (taxid: 10090) confident COG3415::Transposase and inactivated derivatives [DNA replication, recombination, and repair] 93.29::37-80 PF13359::DDE_Tnp_4 100.00::118-270 GO:0005813::centrosome confident hh_2jn6_A_1::36-78 portable psy675 1175 Q7TSL3::F-box only protein 11 ::Substrate recognition component of the a (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. Binds to and neddylates phosphorylated p53/TP53, inhibiting its transcriptional activity. SCF(FBXO11) does not seem to direct ubiquitination of TP53.::Rattus norvegicus (taxid: 10116) confident COG3420::NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism] 99.83::81-436 PF07602::DUF1565 99.47::65-234 GO:0005634::nucleus confident hh_2inu_A_2::552-573,575-597,599-666,668-691,712-719,727-775 confident psy683 137 Q7TSL3::F-box only protein 11 ::Substrate recognition component of the a (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. Binds to and neddylates phosphorylated p53/TP53, inhibiting its transcriptional activity. SCF(FBXO11) does not seem to direct ubiquitination of TP53.::Rattus norvegicus (taxid: 10116) confident COG3420::NosD Nitrous oxidase accessory protein [Inorganic ion transport and metabolism] 98.86::8-132 PF13229::Beta_helix 99.74::7-133 GO:0048471::perinuclear region of cytoplasm very confident hh_2pyg_A_1::13-133 confident psy11265 945 O08915::AH receptor-interacting protein ::May play a positive role in AHR-mediated (aromatic hydrocarbon receptor) signaling, possibly by influencing its receptivity for ligand and/or its nuclear targeting.::Mus musculus (taxid: 10090) portable COG3425::PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] 100.00::492-795 PF01154::HMG_CoA_synt_N 100.00::5-179 GO:0044237::cellular metabolic process confident hh_2p8u_A_1::491-566,570-575,583-605,610-625,627-667,670-771,773-794 very confident psy744 405 Q5R4S0::5'-AMP-activated protein kinase subunit gamma-2 ::AMP/ATP-binding subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. Also acts as a regulator of cellular polarity by remodeling the actin cytoskeleton; probably by indirectly activating myosin. Gamma non-catalytic subunit mediates binding to AMP, ADP and ATP, leading to activate or inhibit AMPK: AMP-binding results in allosteric activation of alpha catalytic subunit (PRKAA1 or PRKAA2) both by inducing phosphorylation and preventing dephosphorylation of catalytic subunits. ADP also stimulates phosphorylation, without stimulating already phosphorylated catalytic subunit. ATP promotes dephosphorylation of catalytic subunit, rendering the AMPK enzyme inactive.::Pongo abelii (taxid: 9601) confident COG3448::CBS-domain-containing membrane protein [Signal transduction mechanisms] 99.89::45-274 PF00571::CBS 99.00::293-344 GO:0019901::protein kinase binding confident hh_2v8q_E_1::70-346 very confident psy10577 203 Q96EZ8::Microspherule protein 1 ::Modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. May also be an inhibitor of TERT telomerase activity.::Homo sapiens (taxid: 9606) portable COG3456::Predicted component of the type VI protein secretion system, contains a FHA domain [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] 99.26::77-172 PF00498::FHA 99.67::89-162 GO:0031011::Ino80 complex confident hh_2pie_A_1::71-97,101-183 confident psy8407 92 P00011::Cytochrome c ::Plays a role in apoptosis. Suppression of the anti-apoptotic members or activation of the pro-apoptotic members of the Bcl-2 family leads to altered mitochondrial membrane permeability resulting in release of cytochrome c into the cytosol. Binding of cytochrome c to Apaf-1 triggers the activation of caspase-9, which then accelerates apoptosis by activating other caspases.::Canis familiaris (taxid: 9615) very confident COG3474::Cytochrome c2 [Energy production and conversion] 100.00::2-91 PF00034::Cytochrom_C 99.35::2-91 GO:0005829::cytosol very confident hh_1i54_A_1::2-92 very confident psy14949 102 P62894::Cytochrome c ::Plays a role in apoptosis. Suppression of the anti-apoptotic members or activation of the pro-apoptotic members of the Bcl-2 family leads to altered mitochondrial membrane permeability resulting in release of cytochrome c into the cytosol. Binding of cytochrome c to Apaf-1 triggers the activation of caspase-9, which then accelerates apoptosis by activating other caspases.::Bos taurus (taxid: 9913) very confident COG3474::Cytochrome c2 [Energy production and conversion] 99.97::1-101 PF13442::Cytochrome_CBB3 99.64::1-98 GO:0006123::mitochondrial electron transport, cytochrome c to oxygen very confident rp_1i54_A_1::2-100 very confident psy305 130 P48776::Tryptophan 2,3-dioxygenase ::Incorporates oxygen into the indole moiety of tryptophan. Has a broad specificity towards tryptamine and derivatives including D- and L-tryptophan, 5-hydroxytryptophan and serotonin.::Mus musculus (taxid: 10090) confident COG3483::TDO2 Tryptophan 2,3-dioxygenase (vermilion) [Amino acid transport and metabolism] 99.96::1-102 PF03301::Trp_dioxygenase 100.00::1-127 GO:0004833::tryptophan 2,3-dioxygenase activity confident hh_2nox_A_1::1-54,62-95,97-100 very confident psy306 190 P48776::Tryptophan 2,3-dioxygenase ::Incorporates oxygen into the indole moiety of tryptophan. Has a broad specificity towards tryptamine and derivatives including D- and L-tryptophan, 5-hydroxytryptophan and serotonin.::Mus musculus (taxid: 10090) confident COG3483::TDO2 Tryptophan 2,3-dioxygenase (vermilion) [Amino acid transport and metabolism] 100.00::20-146 PF03301::Trp_dioxygenase 100.00::19-146 GO:0004833::tryptophan 2,3-dioxygenase activity confident hh_2nox_A_1::23-36,38-46,48-63,65-111,113-131,134-146 very confident psy4833 141 Q9WTS5::Teneurin-2 ::May function as a cellular signal transducer.::Mus musculus (taxid: 10090) portable COG3485::PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] 96.49::7-79 PF13715::DUF4480 99.70::10-93 GO:0031594::neuromuscular junction confident hh_1h8l_A_1::8-34,36-36,38-38,40-55,57-84,86-90 confident psy13745 406 Q22492::Beta-hexosaminidase A ::Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines. Degrades chitotriose.::Caenorhabditis elegans (taxid: 6239) portable COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 100.00::1-369 PF00728::Glyco_hydro_20 100.00::7-274 GO:0005615::extracellular space confident hh_3ozo_A_1::1-108,114-162,166-222,233-316 very confident psy14880 497 Q9SYK0::Beta-hexosaminidase 2 ::Has a broad substrate specificity. Can use synthetic substrates such as p-nitrophenyl-beta-N-acetylglucosaminide, p-nitrophenyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (pNP-GlcNAc), p-nitrophenyl-2-acetamido-2-deoxy-beta-D-galactopyranoside (pNP-GalNAc), 4-methylumbelliferyl-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc), and 4-methylumbelliferyl-6-sulfo-2-acetamido-2-deoxy-beta-D-glucopyranoside (MU-GlcNAc-6SO(4)) as substrates. Removes terminal GlcNAc residues from alpha1,3- and alpha1,6-mannosyl branches of biantennary N-glycans without any strict branch preference.::Arabidopsis thaliana (taxid: 3702) portable COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 100.00::16-485 PF00728::Glyco_hydro_20 100.00::27-455 GO:0005615::extracellular space confident hh_3ozo_A_1::4-57,71-93,108-110,139-182,189-236,239-248,285-332,334-398,400-497 very confident psy13692 592 P06865::Beta-hexosaminidase subunit alpha ::Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines, in the brain and other tissues. The form B is active against certain oligosaccharides. The form S has no measurable activity.::Homo sapiens (taxid: 9606) confident COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 100.00::107-516 PF00728::Glyco_hydro_20 100.00::163-488 GO:0006026::aminoglycan catabolic process confident hh_1now_A_1::18-24,27-76,81-142,144-279,282-372,382-398,402-516,518-525 very confident psy11379 306 Q5RC84::Beta-hexosaminidase subunit alpha ::Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines, in the brain and other tissues.::Pongo abelii (taxid: 9601) confident COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 100.00::25-305 PF00728::Glyco_hydro_20 100.00::125-303 GO:0006026::aminoglycan catabolic process confident hh_2yl5_A_1::124-166,168-177,179-289 very confident psy12961 315 Q5RC84::Beta-hexosaminidase subunit alpha ::Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines, in the brain and other tissues.::Pongo abelii (taxid: 9601) portable COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 100.00::7-315 PF00728::Glyco_hydro_20 100.00::2-314 GO:0008152::metabolic process confident hh_1now_A_1::2-7,9-26,31-37,39-40,42-44,46-49,84-97,102-200,205-247,254-314 very confident psy2349 164 no hit no match COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 100.00::2-163 PF00728::Glyco_hydro_20 100.00::7-163 GO:0015929::hexosaminidase activity confident hh_2epl_X_1::2-104,108-131,133-134,136-143,145-157 very confident psy2348 131 no hit no match COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 99.93::1-131 PF00728::Glyco_hydro_20 100.00::7-130 GO:0015929::hexosaminidase activity confident hh_2epl_X_1::1-105,109-131 very confident psy12962 75 Q22492::Beta-hexosaminidase A ::Responsible for the degradation of GM2 gangliosides, and a variety of other molecules containing terminal N-acetyl hexosamines. Degrades chitotriose.::Caenorhabditis elegans (taxid: 6239) portable COG3525::Chb N-acetyl-beta-hexosaminidase [Carbohydrate transport and metabolism] 99.52::1-75 PF00728::Glyco_hydro_20 99.76::1-75 GO:0071944::cell periphery confident hh_1now_A_1::1-20,25-75 very confident psy14558 136 Q9VZS6::Putative neutral sphingomyelinase ::::Drosophila melanogaster (taxid: 7227) confident COG3568::ElsH Metal-dependent hydrolase [General function prediction only] 99.49::8-122 PF03372::Exo_endo_phos 99.31::11-122 GO:0044464::cell part confident hh_1zwx_A_1::10-85,92-124 very confident psy17743 618 Q04750::DNA topoisomerase 1 ::Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. Finally, in the religation step, the DNA 5'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.::Mus musculus (taxid: 10090) very confident COG3569::Topoisomerase IB [DNA replication, recombination, and repair] 100.00::2-358 PF02919::Topoisom_I_N 100.00::1-190 GO:0043204::perikaryon confident hh_1a31_A_1::1-494 very confident psy18197 144 Q497D6::Protein DDI1 homolog 2 ::::Xenopus tropicalis (taxid: 8364) confident COG3577::Predicted aspartyl protease [General function prediction only] 99.61::2-109 PF09668::Asp_protease 99.97::1-101 GO:0005634::nucleus confident hh_3s8i_A_1::1-125 very confident psy17672 319 Q497D6::Protein DDI1 homolog 2 ::::Xenopus tropicalis (taxid: 8364) very confident COG3577::Predicted aspartyl protease [General function prediction only] 99.37::177-276 PF09668::Asp_protease 100.00::157-280 GO:0005829::cytosol confident hh_3s8i_A_1::168-304 very confident psy8018 280 Q5TDH0::Protein DDI1 homolog 2 ::::Homo sapiens (taxid: 9606) confident COG3577::Predicted aspartyl protease [General function prediction only] 99.30::147-245 PF09668::Asp_protease 100.00::126-249 GO:0005829::cytosol confident hh_3s8i_A_1::137-261,263-264,267-274 very confident psy15482 302 Q5TDH0::Protein DDI1 homolog 2 ::::Homo sapiens (taxid: 9606) confident COG3577::Predicted aspartyl protease [General function prediction only] 98.25::214-294 PF09668::Asp_protease 100.00::192-287 GO:0005829::cytosol confident hh_2i1a_A_1::190-286 very confident psy17192 74 P87362::Bleomycin hydrolase ::The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity.::Gallus gallus (taxid: 9031) confident COG3579::PepC Aminopeptidase C [Amino acid transport and metabolism] 100.00::4-74 PF03051::Peptidase_C1_2 100.00::4-70 GO:0005634::nucleus confident hh_2cb5_A_1::4-73 very confident psy17191 377 P87362::Bleomycin hydrolase ::The normal physiological role of BLM hydrolase is unknown, but it catalyzes the inactivation of the antitumor drug BLM (a glycopeptide) by hydrolyzing the carboxamide bond of its B-aminoalaninamide moiety thus protecting normal and malignant cells from BLM toxicity.::Gallus gallus (taxid: 9031) confident COG3579::PepC Aminopeptidase C [Amino acid transport and metabolism] 100.00::22-377 PF03051::Peptidase_C1_2 100.00::22-373 GO:0008233::peptidase activity confident hh_2cb5_A_1::22-152,165-258,260-290,292-329,349-376 very confident psy822 190 Q91X58::AN1-type zinc finger protein 2B ::::Mus musculus (taxid: 10090) confident COG3582::Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only] 97.79::14-152 PF01428::zf-AN1 99.30::10-50 GO:0008270::zinc ion binding confident hh_1wfe_A_1::96-138 very confident psy11667 119 Q9SZ69::Zinc finger A20 and AN1 domain-containing stress-associated protein 7 ::May be involved in environmental stress response.::Arabidopsis thaliana (taxid: 3702) confident COG3582::Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only] 97.60::58-97 PF01428::zf-AN1 99.15::59-98 GO:0044424::intracellular part confident hh_1wff_A_1::50-114 very confident psy16443 412 Q8TCF1::AN1-type zinc finger protein 1 ::::Homo sapiens (taxid: 9606) portable COG3582::Predicted nucleic acid binding protein containing the AN1-type Zn-finger [General function prediction only] 96.31::178-263 PF05839::Apc13p 99.47::84-150 GO:0070979::protein K11-linked ubiquitination confident hh_1wfe_A_1::170-209 very confident psy12531 183 P07764::Fructose-bisphosphate aldolase ::May take part in developmental stage-specific or tissue -specific sugar-phosphate metabolisms. Protein acts on two substrates fructose 1,6-bisphosphate and fructose 1-phosphate (like other class I aldolases).::Drosophila melanogaster (taxid: 7227) confident COG3588::Fructose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism] 100.00::14-183 PF00274::Glycolytic 100.00::15-183 GO:0004332::fructose-bisphosphate aldolase activity confident hh_3bv4_A_1::6-183 very confident psy196 364 P07764::Fructose-bisphosphate aldolase ::May take part in developmental stage-specific or tissue -specific sugar-phosphate metabolisms. Protein acts on two substrates fructose 1,6-bisphosphate and fructose 1-phosphate (like other class I aldolases).::Drosophila melanogaster (taxid: 7227) very confident COG3588::Fructose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism] 100.00::14-344 PF00274::Glycolytic 100.00::15-364 GO:0004332::fructose-bisphosphate aldolase activity very confident hh_3bv4_A_1::6-344 very confident psy354 207 Q5NVR5::Fructose-bisphosphate aldolase A ::Plays a key role in glycolysis and gluconeogenesis. In addition, may also function as scaffolding protein.::Pongo abelii (taxid: 9601) confident COG3588::Fructose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism] 100.00::1-207 PF00274::Glycolytic 100.00::1-207 GO:0004332::fructose-bisphosphate aldolase activity very confident hh_3bv4_A_1::1-207 very confident psy14055 493 P49337::Protein Wnt-4 ::Ligand for members of the frizzled family of seven transmembrane receptors. May be an intracellular signaling molecule involved in segmentation of the forebrain into the neuromere D2 and in differentiation of the dorsal region of the spinal cord. Is likely to signal over only few cell diameters.::Gallus gallus (taxid: 9031) portable COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 99.02::21-112 PF00110::wnt 100.00::181-477 GO:0006355::regulation of transcription, DNA-dependent confident hh_4f0a_B_1::218-260,263-386,419-477 very confident psy2257 75 P42893::Endothelin-converting enzyme 1 ::Converts big endothelin-1 to endothelin-1.::Rattus norvegicus (taxid: 10116) confident COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 99.90::1-75 PF01431::Peptidase_M13 99.96::3-74 GO:0006508::proteolysis confident rp_3dwb_A_1::20-75 very confident psy2256 103 P42893::Endothelin-converting enzyme 1 ::Converts big endothelin-1 to endothelin-1.::Rattus norvegicus (taxid: 10116) confident COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 99.77::32-103 PF01431::Peptidase_M13 99.87::28-102 GO:0010815::bradykinin catabolic process confident hh_3dwb_A_1::29-32,34-103 very confident psy5137 476 Q495T6::Membrane metallo-endopeptidase-like 1 ::Metalloprotease involved in sperm function, possibly by modulating the processes of fertilization and early embryonic development. Degrades a broad variety of small peptides with a preference for peptides shorter than 3 kDa containing neutral bulky aliphatic or aromatic amino acid residues. Shares the same substrate specificiy with MME and cleaves peptides at the same amide bond.::Homo sapiens (taxid: 9606) portable COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 100.00::18-476 PF01431::Peptidase_M13 100.00::270-475 GO:0050435::beta-amyloid metabolic process confident hh_3dwb_A_1::7-55,57-179,230-359,362-476 very confident psy8609 182 Q495T6::Membrane metallo-endopeptidase-like 1 ::Metalloprotease involved in sperm function, possibly by modulating the processes of fertilization and early embryonic development. Degrades a broad variety of small peptides with a preference for peptides shorter than 3 kDa containing neutral bulky aliphatic or aromatic amino acid residues. Shares the same substrate specificiy with MME and cleaves peptides at the same amide bond.::Homo sapiens (taxid: 9606) portable COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 99.95::2-182 PF05649::Peptidase_M13_N 99.96::4-181 GO:0004175::endopeptidase activity confident hh_3dwb_A_1::9-93,95-182 very confident psy1977 764 Q495T6::Membrane metallo-endopeptidase-like 1 ::Metalloprotease involved in sperm function, possibly by modulating the processes of fertilization and early embryonic development. Degrades a broad variety of small peptides with a preference for peptides shorter than 3 kDa containing neutral bulky aliphatic or aromatic amino acid residues. Shares the same substrate specificiy with MME and cleaves peptides at the same amide bond.::Homo sapiens (taxid: 9606) confident COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 100.00::96-764 PF05649::Peptidase_M13_N 100.00::108-496 GO:0005615::extracellular space very confident hh_3dwb_A_1::87-154,156-200,203-207,210-221,223-347,349-550,553-646,649-692,694-764 very confident psy13033 148 O16796::Neprilysin-2 ::Probable cell surface protease.::Caenorhabditis elegans (taxid: 6239) portable COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 99.34::66-147 PF05649::Peptidase_M13_N 99.55::79-146 GO:0006508::proteolysis confident hh_1r1h_A_1::54-62,65-125,127-146 very confident psy2275 625 O14832::Phytanoyl-CoA dioxygenase, peroxisomal ::Converts phytanoyl-CoA to 2-hydroxyphytanoyl-CoA.::Homo sapiens (taxid: 9606) confident COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 100.00::17-562 PF05649::Peptidase_M13_N 99.89::17-175 GO:0006720::isoprenoid metabolic process confident hh_2a1x_A_1::114-141,145-155,168-168,171-281,284-351 very confident psy5325 379 Q10711::Endothelin-converting enzyme 2 ::Converts big endothelin-1 to endothelin-1. Also involved in the processing of various neuroendocrine peptides, including neurotensin, angiotensin I, substance P, proenkephalin-derived peptides, and prodynorphin-derived peptides. May limit beta-amyloid peptide accumulation in brain. May also have methyltransferase activity.::Bos taurus (taxid: 9913) portable COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 100.00::8-360 PF05649::Peptidase_M13_N 100.00::8-256 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_3dwb_A_1::8-28,37-50,55-101,103-131,137-359 very confident psy12577 298 O16796::Neprilysin-2 ::Probable cell surface protease.::Caenorhabditis elegans (taxid: 6239) portable COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 99.88::55-297 PF05649::Peptidase_M13_N 99.93::67-296 GO:0043170::macromolecule metabolic process confident hh_3dwb_A_1::46-113,115-159,240-244,247-258,260-296 very confident psy9963 800 Q495T6::Membrane metallo-endopeptidase-like 1 ::Metalloprotease involved in sperm function, possibly by modulating the processes of fertilization and early embryonic development. Degrades a broad variety of small peptides with a preference for peptides shorter than 3 kDa containing neutral bulky aliphatic or aromatic amino acid residues. Shares the same substrate specificiy with MME and cleaves peptides at the same amide bond.::Homo sapiens (taxid: 9606) confident COG3590::PepO Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones] 100.00::1-693 PF05649::Peptidase_M13_N 100.00::8-425 GO:0050435::beta-amyloid metabolic process confident hh_3dwb_A_1::1-54,56-100,103-107,110-121,123-131,148-253,267-276,278-479,482-575,578-620,622-693 very confident psy8476 421 Q9VFI9::cGMP-specific 3',5'-cyclic phosphodiesterase ::Has a role regulating cGMP transport in Malpighian tubule principal cells.::Drosophila melanogaster (taxid: 7227) confident COG3605::PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] 99.26::240-381 PF01590::GAF 99.38::243-374 GO:0016324::apical plasma membrane confident hh_1ykd_A_1::36-49,51-52,54-91,96-100,142-151,161-187,190-389 very confident psy680 122 Q9HCR9::Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A ::Plays a role in signal transduction by regulating the intracellular concentration of cyclic nucleotides cAMP and cGMP. Catalyzes the hydrolysis of both cAMP and cGMP to 5'-AMP and 5'-GMP, respectively.::Homo sapiens (taxid: 9606) portable COG3605::PtsP Signal transduction protein containing GAF and PtsI domains [Signal transduction mechanisms] 99.06::2-100 PF01590::GAF 98.73::12-106 GO:0043204::perikaryon confident hh_3ibj_A_1::1-8,10-42,46-52,56-61,66-74,76-99 very confident psy11074 710 Q9JHW1::Carboxypeptidase D ::::Rattus norvegicus (taxid: 10116) portable COG3608::Predicted deacylase [General function prediction only] 99.25::413-621 PF00246::Peptidase_M14 100.00::366-615 GO:0044446::intracellular organelle part confident hh_3mn8_A_1::348-401,405-685,687-710 very confident psy16585 298 Q8K1N1::Calcium-independent phospholipase A2-gamma ::Calcium-independent phospholipase A2, which catalyzes the hydrolysis of the sn-2 position of glycerophospholipids, PtdSer and to a lower extent PtdCho. Cleaves membrane phospholipids.::Mus musculus (taxid: 10090) portable COG3621::Patatin [General function prediction only] 99.87::1-145 PF01734::Patatin 99.13::34-147 GO:0043229::intracellular organelle confident hh_1oxw_A_1::5-26,34-62,67-67,69-74,77-95,102-176,179-179,185-209,211-282 very confident psy13372 273 P36951::Putative hydroxypyruvate isomerase ::::Drosophila melanogaster (taxid: 7227) confident COG3622::Hfi Hydroxypyruvate isomerase [Carbohydrate transport and metabolism] 100.00::5-269 PF01261::AP_endonuc_2 99.95::27-230 GO:0005576::extracellular region confident hh_3ngf_A_1::5-19,22-45,47-110,112-117,122-172,176-226,228-263,265-269 very confident psy7935 260 Q6BHA8::Serine/threonine-protein kinase BUD32 ::Component of the EKC/KEOPS complex which promotes both telomere uncapping and telomere elongation (By similarity). The complex is required for efficient recruitment of transcriptional coactivators. Important for bud site selection.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) confident COG3642::Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] 99.92::22-260 PF07714::Pkinase_Tyr 99.97::20-255 GO:0005829::cytosol confident hh_3n9x_A_1::15-50,52-52,58-101,105-214 very confident psy110 358 P17164::Tissue alpha-L-fucosidase ::Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.::Rattus norvegicus (taxid: 10116) confident COG3669::Alpha-L-fucosidase [Carbohydrate transport and metabolism] 100.00::133-256 PF01120::Alpha_L_fucos 100.00::102-356 GO:0005764::lysosome confident hh_3ues_A_1::121-141,144-148,153-154,157-157,175-219,221-244,247-267,275-277,279-322,326-340 very confident psy1381 102 Q9VTJ4::Putative alpha-L-fucosidase ::Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.::Drosophila melanogaster (taxid: 7227) confident COG3669::Alpha-L-fucosidase [Carbohydrate transport and metabolism] 99.98::7-99 PF01120::Alpha_L_fucos 100.00::14-99 GO:0005764::lysosome confident hh_2wvv_A_1::10-71,73-99 very confident psy111 85 C3YWU0::Alpha-L-fucosidase ::Alpha-L-fucosidase is responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.::Branchiostoma floridae (taxid: 7739) confident COG3669::Alpha-L-fucosidase [Carbohydrate transport and metabolism] 98.69::31-83 PF01120::Alpha_L_fucos 99.82::1-83 GO:0015928::fucosidase activity confident hh_2zxd_A_1::1-11,16-43,45-84 very confident psy5322 476 Q28175::Retinoid isomerohydrolase ::Plays important roles in the production of 11-cis retinal and in visual pigment regeneration. The soluble form binds vitamin A (all-trans-retinol), making it available for LRAT processing to all-trans-retinyl ester. The membrane form, palmitoylated by LRAT, binds all-trans-retinyl esters, making them available for IMH (isomerohydrolase) processing to all-cis-retinol. The soluble form is regenerated by transferring its palmitoyl groups onto 11-cis-retinol, a reaction catalyzed by LRAT. The enzymatic activity is linearly dependent of the expression levels and membrane association.::Bos taurus (taxid: 9913) portable COG3670::Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::46-472 PF03055::RPE65 100.00::46-471 GO:0016702::oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen confident hh_3npe_A_1::32-84,86-141,146-204,206-228,230-243,247-253,257-334,341-377,379-432,434-454,457-473 very confident psy14636 447 Q9I993::Beta,beta-carotene 15,15'-monooxygenase ::Symmetrically cleaves beta-carotene into two molecules of retinal. The reaction proceeds in three stages, epoxidation of the 15,15'-double bond, hydration of the double bond leading to ring opening, and oxidative cleavage of the diol formed.::Gallus gallus (taxid: 9031) confident COG3670::Lignostilbene-alpha,beta-dioxygenase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] 100.00::11-444 PF03055::RPE65 100.00::5-442 GO:0042574::retinal metabolic process confident hh_3npe_A_1::3-37,39-91,96-156,158-181,183-198,200-272,280-280,287-306,313-347,349-404,406-425,428-443 very confident psy8607 131 Q64L89::Microsomal glutathione S-transferase 1 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Has a wide substrate specificity.::Bos taurus (taxid: 9913) portable COG3686::Predicted membrane protein [Function unknown] 99.79::12-112 PF01124::MAPEG 99.83::28-113 GO:0044446::intracellular organelle part confident rp_2h8a_A_1::36-83,85-114 very confident psy8608 93 Q64L89::Microsomal glutathione S-transferase 1 ::Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles. Has a wide substrate specificity.::Bos taurus (taxid: 9913) confident COG3686::Predicted membrane protein [Function unknown] 99.85::5-87 PF01124::MAPEG 99.88::3-87 GO:0044710::single-organism metabolic process confident rp_2h8a_A_1::12-58,60-93 very confident psy17465 154 O14684::Prostaglandin E synthase ::Catalyzes the oxidoreduction of prostaglandin endoperoxide H2 (PGH2) to prostaglandin E2 (PGE2).::Homo sapiens (taxid: 9606) confident COG3686::Predicted membrane protein [Function unknown] 99.88::20-150 PF01124::MAPEG 99.92::20-150 GO:0055114::oxidation-reduction process confident hh_3dww_A_1::10-122,124-152 very confident psy15953 154 O14684::Prostaglandin E synthase ::Catalyzes the oxidoreduction of prostaglandin endoperoxide H2 (PGH2) to prostaglandin E2 (PGE2).::Homo sapiens (taxid: 9606) confident COG3686::Predicted membrane protein [Function unknown] 99.90::20-150 PF01124::MAPEG 99.92::21-150 GO:0055114::oxidation-reduction process confident hh_3dww_A_1::9-123,125-152 very confident psy10899 218 B3STU3::Cation transport regulator-like protein 1 ::Negative regulator of Notch signaling pathway involved in embryonic neurogenesis: acts by inhibiting Notch cleavage by furin, maintaining Notch in an immature inactive form, thereby promoting neurogenesis in embryos. May also act as a pro-apoptotic component of the unfolded protein response pathway by mediating the pro-apoptotic effects of the ATF4-ATF3-DDIT3/CHOP cascade.::Rattus norvegicus (taxid: 10116) portable COG3703::ChaC Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism] 100.00::4-163 PF04752::ChaC 100.00::4-158 GO:0044424::intracellular part confident hh_3cry_A_1::4-40,42-67,83-99,104-135,137-138,143-158 confident psy6806 89 Q9R1T1::Barrier-to-autointegration factor ::Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 nons-pecific dsDNA-binding sites which may promote DNA cross-bridging.::Rattus norvegicus (taxid: 10116) very confident COG3743::Uncharacterized conserved protein [Function unknown] 93.70::9-45 PF02961::BAF 100.00::1-88 GO:0005635::nuclear envelope very confident hh_1ci4_A_1::1-89 very confident psy11980 831 Q6ZMW2::Zinc finger protein 782 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG3751::EGL-9 Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones] 99.29::590-807 PF13465::zf-H2C2_2 98.34::344-368 GO:0005634::nucleus confident hh_2hbt_A_1::636-689,693-763,765-792,797-808 very confident psy9586 233 Q9CY27::Very-long-chain enoyl-CoA reductase ::Reduces trans-2,3-stearoyl-CoA to stearoyl-CoA of long and very long chain fatty acids.::Mus musculus (taxid: 10090) confident COG3752::Steroid 5-alpha reductase family enzyme [General function prediction only] 98.23::62-188 PF02544::Steroid_dh 100.00::127-233 GO:0016021::integral to membrane confident hh_2dzj_A_1::1-59 confident psy3539 315 Q5RJM1::Polyprenol reductase ::Probable polyprenol reductase. Plays a key role in early steps of protein N-linked glycosylation by being required for the conversion of polyprenol into dolichol. Dolichols are required for the synthesis of dolichol-linked monosaccharides and the oligosaccharide precursor used for N-glycosylation. Probably acts as a polyprenol reductase that promotes the reduction of the alpha-isoprene unit of polyprenols into dolichols in a NADP-dependent mechanism. Also able to convert testosterone (T) into 5-alpha-dihydrotestosterone (DHT).::Rattus norvegicus (taxid: 10116) confident COG3752::Steroid 5-alpha reductase family enzyme [General function prediction only] 99.04::199-315 PF02544::Steroid_dh 100.00::154-315 GO:0016095::polyprenol catabolic process confident hh_4a2n_B_1::199-230,233-269,271-283,285-315 confident psy3545 130 Q9H8P0::Polyprenol reductase ::Probable polyprenol reductase. Plays a key role in early steps of protein N-linked glycosylation by being required for the conversion of polyprenol into dolichol. Dolichols are required for the synthesis of dolichol-linked monosaccharides and the oligosaccharide precursor used for N-glycosylation. Probably acts as a polyprenol reductase that promotes the reduction of the alpha-isoprene unit of polyprenols into dolichols in a NADP-dependent mechanism. Also able to convert testosterone (T) into 5-alpha-dihydrotestosterone (DHT).::Homo sapiens (taxid: 9606) portable COG3752::Steroid 5-alpha reductase family enzyme [General function prediction only] 99.86::6-128 PF02544::Steroid_dh 100.00::15-129 GO:0044710::single-organism metabolic process confident hh_4a2n_B_1::11-129 confident psy4061 119 no hit no match COG3752::Steroid 5-alpha reductase family enzyme [General function prediction only] 99.83::1-84 PF06966::DUF1295 99.88::1-73 GO:0005794::Golgi apparatus confident hh_4a2n_B_1::1-23,30-42,45-61,64-80 confident psy16530 81 Q0MQ87::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Pan troglodytes (taxid: 9598) portable COG3761::NADH:ubiquinone oxidoreductase 17.2 kD subunit [Energy production and conversion] 99.96::3-81 PF05071::NDUFA12 99.96::2-80 GO:0005739::mitochondrion confident no hit no match psy291 149 Q0MQ87::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Pan troglodytes (taxid: 9598) confident COG3761::NADH:ubiquinone oxidoreductase 17.2 kD subunit [Energy production and conversion] 99.97::43-141 PF05071::NDUFA12 100.00::42-140 GO:0006979::response to oxidative stress confident no hit no match psy16532 84 Q54MV7::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Dictyostelium discoideum (taxid: 44689) confident COG3761::NADH:ubiquinone oxidoreductase 17.2 kD subunit [Energy production and conversion] 99.14::45-80 PF05071::NDUFA12 99.43::47-79 GO:0006979::response to oxidative stress confident no hit no match psy286 284 Q9N2W7::Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Caenorhabditis elegans (taxid: 6239) confident COG3761::NADH:ubiquinone oxidoreductase 17.2 kD subunit [Energy production and conversion] 99.97::175-276 PF05071::NDUFA12 100.00::176-275 GO:0006979::response to oxidative stress confident no hit no match psy10760 356 Q9N291::Lactosylceramide 4-alpha-galactosyltransferase ::Catalyzes the transfer of galactose to lactosylceramide and galactosylceramide. Necessary for the synthesis of the receptor for bacterial verotoxins.::Pan troglodytes (taxid: 9598) confident COG3774::OCH1 Mannosyltransferase OCH1 and related enzymes [Cell envelope biogenesis, outer membrane] 99.60::84-335 PF04572::Gb3_synth 99.97::232-356 GO:0009247::glycolipid biosynthetic process confident hh_2bvl_A_1::161-175,178-208 confident psy2634 749 Q8N1M1::Bestrophin-3 ::Forms calcium-sensitive (By similarity) chloride channels. Permeable to bicarbonate.::Homo sapiens (taxid: 9606) portable COG3781::Predicted membrane protein [Function unknown] 100.00::16-334 PF01062::Bestrophin 100.00::1-332 GO:0006884::cell volume homeostasis confident hh_3qwp_A_1::620-708,711-747 very confident psy2469 220 Q8VDP2::UPF0428 protein CXorf56 homolog ::::Mus musculus (taxid: 10090) very confident COG3791::Uncharacterized conserved protein [Function unknown] 93.80::30-118 no hit no match GO:0071013::catalytic step 2 spliceosome confident hh_3fac_A_1::87-117 portable psy17885 95 Q02280::Potassium voltage-gated channel protein eag ::Structural component of a potassium channel. Mediates the potassium permeability of membranes; potassium current is regulated by CaMKII and CASK. Has a role in growth of the perineurial glial layer of the larval peripheral nerve.::Drosophila melanogaster (taxid: 7227) confident COG3829::RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms] 96.90::1-73 PF00989::PAS 98.88::27-73 GO:0022843::voltage-gated cation channel activity very confident hh_2l0w_A_1::24-73,78-85 very confident psy6813 758 Q9R152::Poly [ADP-ribose] polymerase 1 ::Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks. Mediates the poly(ADP-ribosyl)ation of APLF and CHFR. Positively regulates the transcription of MTUS1 and negatively regulates the transcription of MTUS2/TIP150. With EEF1A1 and TXK, forms a complex that acts as a T-helper 1 (Th1) cell-specific transcription factor and binds the promoter of IFN-gamma to directly regulate its transcription, and is thus involved importantly in Th1 cytokine production.::Cricetulus griseus (taxid: 10029) portable COG3831::Uncharacterized conserved protein [Function unknown] 98.97::99-175 PF00644::PARP 100.00::497-755 GO:0005634::nucleus confident hh_1efy_A_1::359-421,425-429,431-612,657-704,706-722,726-758 very confident psy340 125 Q6D2F6::Fe(3+) ions import ATP-binding protein FbpC 2 ::Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.::Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) (taxid: 218491) portable COG3839::MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism] 99.97::14-124 PF00005::ABC_tran 99.84::14-116 GO:0005886::plasma membrane confident hh_3fvq_A_1::2-124 very confident psy7411 474 Q8R420::ATP-binding cassette sub-family A member 3 ::Plays an important role in the formation of pulmonary surfactant, probably by transporting lipids such as cholesterol.::Mus musculus (taxid: 10090) portable COG3842::PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] 99.93::347-468 PF00005::ABC_tran 99.68::365-442 GO:0005737::cytoplasm confident hh_3nh6_A_1::347-436,438-449,452-462 very confident psy16345 121 P32568::Protein SNQ2 ::Could be an ATP-dependent permease. Confers hyper-resistance to the mutagens 4-nitroquinoline-N-oxide (4-NQO) and triaziquone, as well as to the chemicals sulphomethuron methyl phenanthroline when present in multiple copies. Exhibits nucleoside triphosphatase activity.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG3842::PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism] 100.00::20-117 PF00005::ABC_tran 99.88::37-111 GO:0045177::apical part of cell confident hh_2olj_A_1::21-115 very confident psy6003 109 Q577Y7::Blue-light-activated histidine kinase ::Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light. Once ejected from an infected animal host, sunlight acts as an environmental signal that increases the virulence of the bacterium, preparing it for infection of the next host. This photoreceptor protein is directly related to the bacterium's survival and replication within host macrophages.::Brucella abortus biovar 1 (strain 9-941) (taxid: 262698) portable COG3852::NtrB Signal transduction histidine kinase, nitrogen specific [Signal transduction mechanisms] 97.72::2-90 PF13426::PAS_9 99.68::8-94 GO:0005887::integral to plasma membrane confident hh_1byw_A_1::9-46,48-93 very confident psy5878 565 O61367::Arginine kinase ::May play an important role in the energy releasing mechanism in the visual system. By acting as an energy shuttle and/or as an energy reservoir, ARGK can provide both spatial and temporal buffering in delivering energy in sensory cells.::Apis mellifera (taxid: 7460) confident COG3869::Arginine kinase [Amino acid transport and metabolism] 100.00::43-296 PF00217::ATP-gua_Ptrans 100.00::65-295 GO:0004054::arginine kinase activity confident hh_1m15_A_1::296-565 very confident psy9603 150 Q6ICG8::Postacrosomal sheath WW domain-binding protein ::May play a role in meotic resumption and pronuclear formation, mediated by a WW domain-signaling pathway during fertilization.::Homo sapiens (taxid: 9606) portable COG3883::Uncharacterized protein conserved in bacteria [Function unknown] 96.81::8-47 PF04582::Reo_sigmaC 97.59::5-27 GO:0043232::intracellular non-membrane-bounded organelle confident hh_2qih_A_1::4-62 confident psy1409 320 Q9H9H4::Vacuolar protein sorting-associated protein 37B ::Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies. May be involved in cell growth and differentiation.::Homo sapiens (taxid: 9606) portable COG3883::Uncharacterized protein conserved in bacteria [Function unknown] 94.61::38-182 PF07200::Mod_r 99.98::99-244 GO:0044446::intracellular organelle part confident hh_2p22_C_1::97-133,138-247 confident psy2820 82 Q811U3::ELKS/Rab6-interacting/CAST family member 1 ::Regulatory subunit of the IKK complex. Probably recruits IkappaBalpha/NFKBIA to the complex (By similarity). May be involved in the organization of the cytomatrix at the nerve terminals active zone (CAZ) which regulates neurotransmitter release. May be involved in vesicle trafficking at the CAZ. May be involved in Rab-6 regulated endosomes to Golgi transport.::Rattus norvegicus (taxid: 10116) confident COG3883::Uncharacterized protein conserved in bacteria [Function unknown] 92.11::21-78 PF10174::Cast 99.58::2-81 GO:0008385::IkappaB kinase complex confident hh_1deb_A_1::20-52,64-77 confident psy17695 222 Q8CGY8::UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit ::Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.::Mus musculus (taxid: 10090) confident COG3914::Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] 100.00::1-222 PF13844::Glyco_transf_41 99.97::138-222 GO:0005829::cytosol confident hh_4gyw_A_1::2-115,122-144,146-147,150-178,180-222 very confident psy15362 200 Q8CGY8::UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit ::Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.::Mus musculus (taxid: 10090) confident COG3914::Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] 99.97::41-199 PF13844::Glyco_transf_41 100.00::1-200 GO:0005829::cytosol confident rp_2vsy_A_1::43-200 very confident psy15363 130 Q8CGY8::UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit ::Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.::Mus musculus (taxid: 10090) confident COG3914::Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] 99.98::2-129 PF13844::Glyco_transf_41 100.00::1-130 GO:0005829::cytosol confident hh_4gyw_A_1::1-130 very confident psy17691 673 Q8CGY8::UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit ::Catalyzes the transfer of a single N-acetylglucosamine from UDP-GlcNAc to a serine or threonine residue in cytoplasmic and nuclear proteins resulting in their modification with a beta-linked N-acetylglucosamine (O-GlcNAc). Glycosylates a large and diverse number of proteins including histone H2B, AKT1, MLL5, MAPT/TAU and HCFC1. Can regulate their cellular processes via cross-talk between glycosylation and phosphorylation or by affecting proteolytic processing. Involved in insulin resistance in muscle and adipocyte cells via glycosylating insulin signaling components and inhibiting the 'Thr-308' phosphorylation of AKT1, enhancing IRS1 phosphorylation and attenuating insulin signaling. Component of a THAP1/THAP3-HCFC1-OGT complex that is required for the regulation of the transcriptional activity of RRM1. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues.::Mus musculus (taxid: 10090) confident COG3914::Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] 100.00::129-672 PF13844::Glyco_transf_41 100.00::308-672 GO:0044464::cell part confident hh_2vsy_A_1::131-371,399-400,410-410,459-511,552-670 very confident psy7291 158 no hit no match COG3958::Transketolase, C-terminal subunit [Carbohydrate transport and metabolism] 99.97::1-156 PF02780::Transketolase_C 99.88::53-157 GO:0005774::vacuolar membrane confident hh_2ozl_B_1::1-60,76-155 very confident psy786 176 Q5R4C1::Transketolase ::::Pongo abelii (taxid: 9601) confident COG3959::Transketolase, N-terminal subunit [Carbohydrate transport and metabolism] 100.00::9-174 PF00456::Transketolase_N 100.00::10-175 GO:0005875::microtubule associated complex confident hh_3mos_A_1::10-161,165-175 very confident psy15960 177 Q9QXE0::2-hydroxyacyl-CoA lyase 1 ::Catalyzes a carbon-carbon cleavage reaction; cleaves a 2-hydroxy-3-methylacyl-CoA into formyl-CoA and a 2-methyl-branched fatty aldehyde.::Mus musculus (taxid: 10090) confident COG3961::Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only] 99.97::24-177 PF02775::TPP_enzyme_C 99.89::92-177 GO:0044710::single-organism metabolic process confident hh_2c31_A_1::67-134,140-177 very confident psy12266 107 P53215::tRNA(His) guanylyltransferase ::Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG4021::Uncharacterized conserved protein [Function unknown] 99.92::36-106 PF04446::Thg1 99.97::39-106 GO:0005829::cytosol confident hh_3otd_A_1::35-106 very confident psy12259 848 P53215::tRNA(His) guanylyltransferase ::Adds a GMP to the 5'-end of tRNA(His) after transcription and RNase P cleavage.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG4021::Uncharacterized conserved protein [Function unknown] 100.00::575-835 PF04446::Thg1 100.00::600-724 GO:0008033::tRNA processing confident hh_3otd_A_1::574-582,600-842 very confident psy424 98 Q9CQS8::Protein transport protein Sec61 subunit beta ::Necessary for protein translocation in the endoplasmic reticulum.::Mus musculus (taxid: 10090) very confident COG4023::SBH1 Preprotein translocase subunit Sec61beta [Intracellular trafficking and secretion] 98.51::52-91 PF03911::Sec61_beta 99.76::51-91 GO:0031205::endoplasmic reticulum Sec complex very confident hh_2wwb_C_1::2-24,26-96 very confident psy422 164 Q9CQS8::Protein transport protein Sec61 subunit beta ::Necessary for protein translocation in the endoplasmic reticulum.::Mus musculus (taxid: 10090) confident COG4023::SBH1 Preprotein translocase subunit Sec61beta [Intracellular trafficking and secretion] 98.44::118-157 PF03911::Sec61_beta 99.71::117-157 GO:0033365::protein localization to organelle confident hh_2wwb_C_1::68-90,92-162 very confident psy4582 133 Q61187::Tumor susceptibility gene 101 protein ::Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Binds to ubiquitinated cargo proteins and is required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs). Mediates the association between the ESCRT-0 and ESCRT-I complex. Required for completion of cytokinesis; the function requires CEP55. May be involved in cell growth and differentiation. Acts as a negative growth regulator.::Mus musculus (taxid: 10090) portable COG4026::Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] 90.58::45-112 PF09304::Cortex-I_coil 95.67::44-108 GO:0044446::intracellular organelle part confident hh_3iv1_A_1::33-107 very confident psy17734 626 Q54KI3::Protein arginine N-methyltransferase 5 ::Methylates arginine residues in proteins such as small nuclear ribonucleoproteins or histone H2A/H4.::Dictyostelium discoideum (taxid: 44689) confident COG4076::Predicted RNA methylase [General function prediction only] 99.63::311-464 PF05185::PRMT5 100.00::169-606 GO:0043234::protein complex confident hh_2y1w_A_1::309-332,341-363,368-369,371-397,399-503,505-514,516-558,562-608 very confident psy6976 177 Q9GUM2::Beta-1,4-N-acetylgalactosaminyltransferase bre-4 ::Catalyzes the transfer of galactose onto proteins or lipids. Required for susceptibility to pore-forming crystal toxins in conjunction with bre-1, bre-2, bre-3 and bre-5.::Caenorhabditis elegans (taxid: 6239) confident COG4092::Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] 98.94::2-106 PF02709::Glyco_transf_7C 99.91::49-126 GO:0006024::glycosaminoglycan biosynthetic process confident hh_2fy7_A_1::2-177 very confident psy6979 167 Q9GUM2::Beta-1,4-N-acetylgalactosaminyltransferase bre-4 ::Catalyzes the transfer of galactose onto proteins or lipids. Required for susceptibility to pore-forming crystal toxins in conjunction with bre-1, bre-2, bre-3 and bre-5.::Caenorhabditis elegans (taxid: 6239) confident COG4092::Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] 94.95::5-56 PF13733::Glyco_transf_7N 99.81::79-139 GO:0009247::glycolipid biosynthetic process confident hh_3lw6_A_1::79-110,113-146,149-166 very confident psy10687 622 A7MB63::Cystinosin ::Thought to transport cystine out of lysosomes.::Bos taurus (taxid: 9913) confident COG4095::Uncharacterized conserved protein [Function unknown] 95.83::124-177 PF04193::PQ-loop 99.14::124-177 GO:0005764::lysosome confident rp_1vt4_I_1::116-129,131-143,146-161,171-200,204-238,241-282,286-291,293-323,325-362,365-384,387-393,403-485,514-529,538-540,544-544,555-601,605-608 portable psy10689 369 Q9VCR7::Cystinosin homolog ::Thought to transport cystine out of lysosomes.::Drosophila melanogaster (taxid: 7227) confident COG4095::Uncharacterized conserved protein [Function unknown] 96.16::67-120 PF04193::PQ-loop 99.28::67-120 GO:0005774::vacuolar membrane confident rp_1vt4_I_1::5-30,39-46,50-65,75-76,82-97,102-130,136-157,159-216,218-223,228-313 portable psy5584 2014 Q9VQH2::Dual oxidase ::Plays a role in innate immunity limiting microbial proliferation in the gut. May generate antimicrobial oxidative burst through its peroxidase-like domain.::Drosophila melanogaster (taxid: 7227) confident COG4097::Predicted ferric reductase [Inorganic ion transport and metabolism] 100.00::1580-2013 PF03098::An_peroxidase 100.00::339-944 GO:0050896::response to stimulus confident hh_2ggz_A_1::1372-1450,1454-1491 very confident psy8389 156 Q96PH1::NADPH oxidase 5 ::Calcium-dependent NADPH oxidase that generates superoxide. Also functions as a calcium-dependent proton channel and may regulate redox-dependent processes in lymphocytes and spermatozoa. May play a role in cell growth and apoptosis. Isoform v2 and isoform v5 are involved in endothelial generation of reactive oxygen species (ROS), proliferation and angiogenesis and contribute to endothelial response to thrombin.::Homo sapiens (taxid: 9606) confident COG4097::Predicted ferric reductase [Inorganic ion transport and metabolism] 95.64::126-156 PF08030::NAD_binding_6 99.74::40-145 GO:0055114::oxidation-reduction process confident hh_3a1f_A_1::40-156 very confident psy16312 245 A3KP37::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5 ::Putative methyltransferase involved in mitochondrial complex I assembly at early stages.::Danio rerio (taxid: 7955) confident COG4106::Tam Trans-aconitate methyltransferase [General function prediction only] 99.80::2-205 PF01209::Ubie_methyltran 99.75::2-127 GO:0031314::extrinsic to mitochondrial inner membrane confident hh_3bkw_A_1::2-18,20-77 very confident psy3961 371 Q8BYF6::Sodium-coupled monocarboxylate transporter 1 ::Acts as an electrogenic sodium (Na(+)) and chloride (Cl-)-dependent sodium-coupled solute transporter, including transport of monocarboxylates (short-chain fatty acids including L-lactate, D-lactate, pyruvate, acetate, propionate, valerate and butyrate), lactate, mocarboxylate drugs (nicotinate, benzoate, salicylate and 5-aminosalicylate) and ketone bodies (beta-D-hydroxybutyrate, acetoacetate and alpha-ketoisocaproate), with a Na(+):substrate stoichiometry of between 4:1 and 2:1. Catalyzes passive carrier mediated diffusion of iodide. Mediates iodide transport from the thyrocyte into the colloid lumen through the apical membrane. May be responsible for the absorption of D-lactate and monocarboxylate drugs from the intestinal tract. May play a critical role in the entry of L-lactate and ketone bodies into neurons by a process driven by an electrochemical Na(+) gradient and hence contribute to the maintenance of the energy status and function of neurons.::Mus musculus (taxid: 10090) portable COG4145::PanF Na+/panthothenate symporter [Coenzyme metabolism] 100.00::10-369 PF00474::SSF 100.00::40-367 GO:0015075::ion transmembrane transporter activity confident hh_2xq2_A_1::2-221,223-233,236-239,298-363 very confident psy7241 84 Q8BGY9::High affinity choline transporter 1 ::Imports choline from the extracellular space to the neuron with high affinity. Rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent.::Mus musculus (taxid: 10090) confident COG4145::PanF Na+/panthothenate symporter [Coenzyme metabolism] 93.71::3-56 PF00474::SSF 97.47::30-73 GO:0043025::neuronal cell body confident hh_3dh4_A_2::3-32,39-62 confident psy16064 515 Q8BGY9::High affinity choline transporter 1 ::Imports choline from the extracellular space to the neuron with high affinity. Rate-limiting step in acetylcholine synthesis. Sodium ion and chloride ion dependent.::Mus musculus (taxid: 10090) confident COG4147::DhlC Predicted symporter [General function prediction only] 100.00::13-503 PF00474::SSF 100.00::47-431 GO:0043025::neuronal cell body confident hh_2xq2_A_1::11-153,196-296,300-312,314-417,419-441,451-454,461-490 very confident psy3973 285 P83740::Putative sodium-dependent multivitamin transporter ::::Drosophila melanogaster (taxid: 7227) portable COG4147::DhlC Predicted symporter [General function prediction only] 99.47::24-220 PF00474::SSF 99.34::16-117 GO:0044464::cell part confident hh_2xq2_A_1::15-37,42-128,188-215 confident psy7219 288 O35600::Retinal-specific ATP-binding cassette transporter ::In the visual cycle, acts as an inward-directed retinoid flipase, retinoid substrates imported by ABCA4 from the extracellular or intradiscal (rod) membrane surfaces to the cytoplasmic membrane surface are all-trans-retinaldehyde (ATR) and N-retinyl-phosphatidyl-ethanolamine (NR-PE). Once transported to the cytoplasmic surface, ATR is reduced to vitamin A by trans-retinol dehydrogenase (tRDH) and then transferred to the retinal pigment epithelium (RPE) where it is converted to 11-cis-retinal. May play a role in photoresponse, removing ATR/NR-PE from the extracellular photoreceptor surfaces during bleach recovery.::Mus musculus (taxid: 10090) portable COG4152::ABC-type uncharacterized transport system, ATPase component [General function prediction only] 99.81::212-285 PF00005::ABC_tran 99.51::232-282 GO:0044699::single-organism process confident hh_2iw3_A_1::212-224,227-277 very confident psy859 247 Q8R420::ATP-binding cassette sub-family A member 3 ::Plays an important role in the formation of pulmonary surfactant, probably by transporting lipids such as cholesterol.::Mus musculus (taxid: 10090) portable COG4152::ABC-type uncharacterized transport system, ATPase component [General function prediction only] 99.91::14-235 PF13732::DUF4162 98.18::136-230 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_1vpl_A_1::13-87 very confident psy863 216 Q8R420::ATP-binding cassette sub-family A member 3 ::Plays an important role in the formation of pulmonary surfactant, probably by transporting lipids such as cholesterol.::Mus musculus (taxid: 10090) portable COG4152::ABC-type uncharacterized transport system, ATPase component [General function prediction only] 99.46::9-137 PF13732::DUF4162 98.17::38-134 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2ihy_A_1::9-43 portable psy11402 135 P28288::ATP-binding cassette sub-family D member 3 ::Probable transporter. The nucleotide-binding fold acts as an ATP-binding subunit with ATPase activity.::Homo sapiens (taxid: 9606) confident COG4178::ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only] 100.00::6-134 PF06472::ABC_membrane_2 100.00::1-134 GO:0006635::fatty acid beta-oxidation confident hh_4f4c_A_2::13-49,51-130 portable psy17303 159 Q8MJ30::Dihydropteridine reductase ::The product of this enzyme, tetrahydrobiopterin (BH-4), is an essential cofactor for phenylalanine, tyrosine, and tryptophan hydroxylases.::Sus scrofa (taxid: 9823) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 97.43::92-159 PF00106::adh_short 98.36::72-159 GO:0005737::cytoplasm confident rp_1ooe_A_1::74-159 very confident psy5125 227 Q8MJ30::Dihydropteridine reductase ::The product of this enzyme, tetrahydrobiopterin (BH-4), is an essential cofactor for phenylalanine, tyrosine, and tryptophan hydroxylases.::Sus scrofa (taxid: 9823) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.76::89-227 PF00106::adh_short 99.57::90-227 GO:0005737::cytoplasm confident hh_1ooe_A_1::88-103,106-113,115-226 very confident psy12454 113 P39640::Bacilysin biosynthesis oxidoreductase BacC ::Part of the bacABCDE operon responsible for the biosynthesis of bacilysin.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.93::4-112 PF00106::adh_short 99.87::8-112 GO:0005829::cytosol confident hh_2gdz_A_1::1-112 very confident psy8445 131 P99120::Diacetyl reductase [(S)-acetoin forming] ::Catalyzes the irreversible reduction of 2,3-butanediol to (S)-acetoin in the presence of NADH.::Staphylococcus aureus (strain N315) (taxid: 158879) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::2-131 PF00106::adh_short 99.94::5-126 GO:0005829::cytosol confident hh_4fgs_A_1::2-48,52-53,55-130 very confident psy14907 181 Q48436::Diacetyl reductase [(S)-acetoin forming] ::Catalyzes the reversible reduction of (S)-acetoin to 2,3-butanediol in the presence of NADH.::Klebsiella pneumoniae (taxid: 573) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.93::68-180 PF00106::adh_short 99.81::68-180 GO:0005829::cytosol confident hh_3a28_C_1::68-113,116-180 very confident psy15155 185 Q8NUV9::Uncharacterized oxidoreductase MW2403 ::::Staphylococcus aureus (strain MW2) (taxid: 196620) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::18-184 PF00106::adh_short 100.00::22-185 GO:0005829::cytosol confident hh_3pgx_A_1::16-67,69-115,118-185 very confident psy9256 265 Q9CXR1::Dehydrogenase/reductase SDR family member 7 ::::Mus musculus (taxid: 10090) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::41-265 PF00106::adh_short 99.95::47-265 GO:0006629::lipid metabolic process confident hh_4g81_D_1::40-94,98-116,179-265 very confident psy16158 136 P48758::Carbonyl reductase [NADPH] 1 ::NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.::Mus musculus (taxid: 10090) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.94::12-135 PF00106::adh_short 99.91::5-133 GO:0016616::oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor confident hh_2cfc_A_1::11-108,117-134 very confident psy2038 155 Q8N3Y7::Epidermal retinol dehydrogenase 2 ::Oxidoreductase with strong preference for NAD. Active in both the oxidative and reductive directions. Oxidizes all-trans-retinol in all-trans-retinaldehyde. No activity was detected with 11-cis-retinol or 11-cis-retinaldehyde as substrates with either NAD(+)/NADH or NADP(+)/NADPH.::Homo sapiens (taxid: 9606) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.94::36-155 PF00106::adh_short 99.88::41-154 GO:0042574::retinal metabolic process confident hh_1yb1_A_1::26-89,91-154 very confident psy5126 123 Q8MJ30::Dihydropteridine reductase ::The product of this enzyme, tetrahydrobiopterin (BH-4), is an essential cofactor for phenylalanine, tyrosine, and tryptophan hydroxylases.::Sus scrofa (taxid: 9823) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.62::28-122 PF00106::adh_short 99.52::21-118 GO:0044444::cytoplasmic part confident hh_1ooe_A_1::2-118 very confident psy346 87 P50171::Estradiol 17-beta-dehydrogenase 8 ::NAD-dependent 17-beta-hydroxysteroid dehydrogenase with highest activity towards estradiol. Has very low activity towards testosterone (By similarity). The heteroteramer with CBR4 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria.::Mus musculus (taxid: 10090) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.83::6-86 PF00106::adh_short 99.63::4-79 GO:0044710::single-organism metabolic process confident hh_1vl8_A_1::5-33,35-85 very confident psy12453 112 Q48436::Diacetyl reductase [(S)-acetoin forming] ::Catalyzes the reversible reduction of (S)-acetoin to 2,3-butanediol in the presence of NADH.::Klebsiella pneumoniae (taxid: 573) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.93::4-112 PF00106::adh_short 99.85::8-111 GO:0055114::oxidation-reduction process confident hh_2gdz_A_1::1-111 very confident psy10251 151 Q8CN40::Uncharacterized oxidoreductase SE_2036 ::::Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.97::4-151 PF00106::adh_short 99.92::10-151 GO:0055114::oxidation-reduction process confident hh_2zat_A_1::4-58,60-151 very confident psy12836 429 Q8NBN7::Retinol dehydrogenase 13 ::Does not exhibit retinol dehydrogenase (RDH) activity in vitro.::Homo sapiens (taxid: 9606) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::139-406 PF13561::adh_short_C2 100.00::149-416 GO:0003959::NADPH dehydrogenase activity confident hh_3rd5_A_1::135-186,192-215,220-266,289-364,368-375,377-399,403-418 very confident psy11190 248 P36086::Uncharacterized oxidoreductase YKL071W ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::2-233 PF13561::adh_short_C2 100.00::8-245 GO:0004090::carbonyl reductase (NADPH) activity very confident hh_1sny_A_1::1-26,28-67,69-248 very confident psy345 462 P38004::3-oxoacyl-[acyl-carrier-protein] reductase FabG ::Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.::Chlamydia trachomatis (strain D/UW-3/Cx) (taxid: 272561) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::117-357 PF13561::adh_short_C2 100.00::116-461 GO:0004303::estradiol 17-beta-dehydrogenase activity confident hh_2hq1_A_1::117-138,148-160,164-165,171-200,202-252,254-318,414-461 very confident psy4246 328 Q91WL8::WW domain-containing oxidoreductase ::Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.::Mus musculus (taxid: 10090) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::120-328 PF13561::adh_short_C2 99.95::130-328 GO:0005794::Golgi apparatus confident hh_3ftp_A_1::117-170,173-272,274-296,299-328 very confident psy15124 256 P12310::Glucose 1-dehydrogenase ::::Bacillus subtilis (strain 168) (taxid: 224308) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::3-235 PF13561::adh_short_C2 100.00::12-251 GO:0005829::cytosol confident hh_3a28_C_1::4-52,54-252 very confident psy7994 230 P48758::Carbonyl reductase [NADPH] 1 ::NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.::Mus musculus (taxid: 10090) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::1-216 PF13561::adh_short_C2 99.98::3-218 GO:0005829::cytosol confident hh_1wma_A_1::1-19,21-229 very confident psy5462 182 Q4A054::Uncharacterized oxidoreductase SSP0419 ::::Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.98::4-164 PF13561::adh_short_C2 99.93::4-164 GO:0005829::cytosol confident hh_4g81_D_1::4-164 very confident psy6113 406 A4FUZ6::Hydroxysteroid dehydrogenase-like protein 2 ::Has apparently no steroid dehydrogenase activity.::Bos taurus (taxid: 9913) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::4-297 PF13561::adh_short_C2 100.00::16-310 GO:0005875::microtubule associated complex confident hh_3kvo_A_1::2-110,170-245,247-271,274-295,297-337 very confident psy16220 223 P96825::Putative short-chain type dehydrogenase/reductase Rv0148 ::::Mycobacterium tuberculosis (taxid: 1773) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::6-208 PF13561::adh_short_C2 100.00::16-203 GO:0008210::estrogen metabolic process confident hh_1gz6_A_1::1-203 very confident psy6643 324 Q3U0B3::Dehydrogenase/reductase SDR family member 11 ::::Mus musculus (taxid: 10090) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::2-170 PF13561::adh_short_C2 100.00::2-200 GO:0016063::rhodopsin biosynthetic process confident hh_3pgx_A_1::2-51,53-104,106-121,124-149,152-181,183-200 very confident psy8794 386 P48758::Carbonyl reductase [NADPH] 1 ::NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.::Mus musculus (taxid: 10090) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::1-350 PF13561::adh_short_C2 100.00::13-365 GO:0016616::oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor confident hh_2et6_A_1::3-29,31-40,43-56,69-78,81-162,282-307,311-320,322-346,349-352,354-367 very confident psy16161 387 P48758::Carbonyl reductase [NADPH] 1 ::NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.::Mus musculus (taxid: 10090) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::54-361 PF13561::adh_short_C2 100.00::64-379 GO:0016616::oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor confident hh_1wma_A_1::55-76,78-78,81-83,85-91,93-94,100-126,128-137,139-264,269-289,342-373,375-381 very confident psy8786 484 Q5RCU5::Carbonyl reductase [NADPH] 1 ::NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.::Pongo abelii (taxid: 9601) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.95::183-393 PF13561::adh_short_C2 99.94::193-408 GO:0016616::oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor confident hh_1yo6_A_1::184-209,211-287,317-347,352-399,402-406 very confident psy16223 153 Q5RCU5::Carbonyl reductase [NADPH] 1 ::NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.::Pongo abelii (taxid: 9601) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.80::1-149 PF13561::adh_short_C2 99.71::11-144 GO:0016616::oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor confident hh_1wma_A_1::1-86,89-122,127-147 very confident psy6644 125 O74628::Uncharacterized oxidoreductase C162.03 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.97::2-124 PF13561::adh_short_C2 99.94::2-124 GO:0031090::organelle membrane confident hh_1xg5_A_1::2-111,114-124 very confident psy9125 117 P38004::3-oxoacyl-[acyl-carrier-protein] reductase FabG ::Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.::Chlamydia trachomatis (strain D/UW-3/Cx) (taxid: 272561) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.96::1-114 PF13561::adh_short_C2 99.91::1-113 GO:0031090::organelle membrane confident hh_3tsc_A_1::1-91,95-113 very confident psy9659 204 Q99J47::Dehydrogenase/reductase SDR family member 7B ::Putative oxidoreductase.::Mus musculus (taxid: 10090) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::2-189 PF13561::adh_short_C2 100.00::14-199 GO:0031090::organelle membrane confident hh_3pgx_A_1::8-164,166-199 very confident psy16222 146 P51660::Peroxisomal multifunctional enzyme type 2 ::Bifunctional enzyme acting on the peroxisomal beta-oxidation pathway for fatty acids. Catalyzes the formation of 3-ketoacyl-CoA intermediates from both straight-chain and 2-methyl-branched-chain fatty acids.::Mus musculus (taxid: 10090) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.79::3-128 PF13561::adh_short_C2 99.82::4-145 GO:0036112::medium-chain fatty-acyl-CoA metabolic process confident bp_1gz6_A_1::1-79 very confident psy13409 330 Q8TC12::Retinol dehydrogenase 11 ::Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.::Homo sapiens (taxid: 9606) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::12-315 PF13561::adh_short_C2 100.00::23-326 GO:0042572::retinol metabolic process confident hh_3rd5_A_1::9-60,70-93,98-145,150-165,168-204,253-253,257-282,284-293,295-312,316-326 very confident psy13412 137 Q8TC12::Retinol dehydrogenase 11 ::Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.::Homo sapiens (taxid: 9606) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 98.94::14-130 PF13561::adh_short_C2 99.42::10-136 GO:0043231::intracellular membrane-bounded organelle confident hh_1wma_A_1::11-21,24-37,40-91,109-136 very confident psy6456 76 Q8TC12::Retinol dehydrogenase 11 ::Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity towards 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected.::Homo sapiens (taxid: 9606) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 97.99::8-70 PF13561::adh_short_C2 99.01::9-74 GO:0043231::intracellular membrane-bounded organelle confident hh_1wma_A_1::9-29,47-75 confident psy7504 357 Q8BTX9::Inactive hydroxysteroid dehydrogenase-like protein 1 ::::Mus musculus (taxid: 10090) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::1-348 PF13561::adh_short_C2 100.00::5-352 GO:0044237::cellular metabolic process confident hh_1gz6_A_1::1-45,47-49,53-89,94-139,260-304,306-312,319-323,326-351 very confident psy10968 339 P39483::Glucose 1-dehydrogenase 2 ::::Bacillus megaterium (taxid: 1404) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::27-257 PF13561::adh_short_C2 100.00::37-273 GO:0044710::single-organism metabolic process confident hh_3pgx_A_1::25-77,79-79,81-153,156-196,199-236,238-274 very confident psy1073 107 Q556J2::3-ketodihydrosphingosine reductase ::Catalyzes the reduction of 3-ketodihydrosphingosine (KDS) to dihydrosphingosine (DHS).::Dictyostelium discoideum (taxid: 44689) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.88::5-103 PF13561::adh_short_C2 99.77::7-106 GO:0044710::single-organism metabolic process confident hh_1yb1_A_1::8-29,35-107 very confident psy12833 254 O18404::3-hydroxyacyl-CoA dehydrogenase type-2 ::May function in mitochondrial tRNA maturation (By similarity). May play a role in germline formation.::Drosophila melanogaster (taxid: 7227) very confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::2-238 PF13561::adh_short_C2 100.00::11-252 GO:0047022::7-beta-hydroxysteroid dehydrogenase (NADP+) activity very confident hh_2o23_A_1::2-253 very confident psy14567 238 Q7Z4W1::L-xylulose reductase ::Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. Participates in the uronate cycle of glucose metabolism. May play a role in the water absorption and cellular osmoregulation in the proximal renal tubules by producing xylitol, an osmolyte, thereby preventing osmolytic stress from occurring in the renal tubules.::Homo sapiens (taxid: 9606) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::10-232 PF13561::adh_short_C2 100.00::19-232 GO:0050038::L-xylulose reductase (NADP+) activity very confident hh_3d3w_A_1::11-104,106-232 very confident psy2266 313 P48758::Carbonyl reductase [NADPH] 1 ::NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.::Mus musculus (taxid: 10090) portable COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 99.93::3-281 PF13561::adh_short_C2 99.91::4-307 GO:0055114::oxidation-reduction process confident hh_1wma_A_1::7-84,178-301 very confident psy15125 296 P55336::3-oxoacyl-[acyl-carrier-protein] reductase FabG ::Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis.::Vibrio harveyi (taxid: 669) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::2-277 PF13561::adh_short_C2 100.00::12-291 GO:0055114::oxidation-reduction process confident hh_3pgx_A_1::2-52,54-99,103-124,152-162,171-237,239-255,257-292 very confident psy942 762 Q99LB2::Dehydrogenase/reductase SDR family member 4 ::Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.::Mus musculus (taxid: 10090) confident COG4221::Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] 100.00::378-612 PF13561::adh_short_C2 100.00::388-625 GO:0055114::oxidation-reduction process confident hh_2zat_A_1::377-430,432-626 very confident psy17381 169 Q16891::Mitochondrial inner membrane protein ::::Homo sapiens (taxid: 9606) portable COG4223::Uncharacterized protein conserved in bacteria [Function unknown] 99.54::9-162 PF09731::Mitofilin 100.00::7-163 GO:0005743::mitochondrial inner membrane confident rp_1vt4_I_1::4-56,58-62,70-110 portable psy15158 709 Q63ZT8::Cytosolic 10-formyltetrahydrofolate dehydrogenase ::::Xenopus tropicalis (taxid: 8364) confident COG4230::Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] 100.00::180-668 PF00171::Aldedh 100.00::259-679 GO:0043234::protein complex confident hh_2o2p_A_1::226-672,676-682 very confident psy333 70 Q04499::Proline dehydrogenase 1, mitochondrial ::Converts proline to delta-1-pyrroline-5-carboxylate.::Drosophila melanogaster (taxid: 7227) confident COG4230::Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] 91.30::5-42 PF01619::Pro_dh 99.55::2-44 GO:0004657::proline dehydrogenase activity confident hh_2ekg_A_1::2-17,20-39 confident psy16295 128 Q9Y3D6::Mitochondrial fission 1 protein ::Promotes the fragmentation of the mitochondrial network and its perinuclear clustering. Can induce cytochrome c release from the mitochondrion to the cytosol, ultimately leading to apoptosis. Also mediates peroxisomal fission.::Homo sapiens (taxid: 9606) confident COG4235::Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones] 98.52::4-84 PF14853::Fis1_TPR_C 99.93::41-93 GO:0044699::single-organism process confident hh_1pc2_A_1::2-35,38-107 very confident psy9195 139 Q9Z1L5::Voltage-dependent calcium channel subunit alpha-2/delta-3 ::The alpha-2/delta subunit of voltage-dependent calcium channels regulates calcium current density and activation/inactivation kinetics of the calcium channel. Acts as a regulatory subunit for P/Q-type calcium channel (CACNA1A), N-type (CACNA1B), L-type (CACNA1C OR CACNA1D) but not T-type (CACNA1G).::Mus musculus (taxid: 10090) confident COG4245::TerY Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain [General function prediction only] 98.36::76-128 PF08399::VWA_N 99.41::2-51 GO:0006816::calcium ion transport confident hh_4fx5_A_1::73-130,133-137 confident psy15857 455 O01382::Caspase ::Involved in the activation cascade of caspases responsible for apoptosis execution. Acts downstream of rpr. Cleaves baculovirus p35 and lamin DmO in vitro.::Drosophila melanogaster (taxid: 7227) confident COG4249::Uncharacterized protein containing caspase domain [General function prediction only] 98.29::23-233 PF00656::Peptidase_C14 99.86::25-202 GO:0006915::apoptotic process confident hh_3sir_A_1::8-215 very confident psy13938 245 P55210::Caspase-7 ::Involved in the activation cascade of caspases responsible for apoptosis execution. Cleaves and activates sterol regulatory element binding proteins (SREBPs). Proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Overexpression promotes programmed cell death.::Homo sapiens (taxid: 9606) portable COG4249::Uncharacterized protein containing caspase domain [General function prediction only] 98.02::23-178 PF00656::Peptidase_C14 99.84::25-231 GO:0043234::protein complex confident hh_1m72_A_1::6-144,148-182,185-220,222-235 very confident psy1450 187 no hit no match COG4257::Vgb Streptogramin lyase [Defense mechanisms] 91.97::106-178 PF03022::MRJP 99.90::106-187 GO:0005576::extracellular region confident hh_3q6k_A_1::1-13,23-43,55-78,80-94,100-132,134-149,151-187 very confident psy13998 319 D3ZVM4::E3 ubiquitin-protein ligase TRIM71 ::E3 ubiquitin-protein ligase that cooperates with the microRNAs (miRNAs) machinery and promotes embryonic stem cells proliferation and maintenance. Binds to miRNAs and associates with AGO2, participating to post-transcriptional repression of transcripts such as CDKN1A. Facilitates the G1-S transition to promote rapid embryonic stem cell self-renewal by repressing CDKN1A expression. Required to maintain proliferation and prevent premature differentiation of neural progenitor cells during early neural development: positively regulates FGF signaling by controlling the stability of SHCBP1.::Rattus norvegicus (taxid: 10116) portable COG4257::Vgb Streptogramin lyase [Defense mechanisms] 99.69::56-318 PF08450::SGL 99.87::58-311 GO:0004842::ubiquitin-protein ligase activity confident hh_1q7f_A_2::96-176,184-189,195-238,243-284,289-319 very confident psy4832 770 Q9WTS5::Teneurin-2 ::May function as a cellular signal transducer.::Mus musculus (taxid: 10090) portable COG4257::Vgb Streptogramin lyase [Defense mechanisms] 99.44::180-531 PF08450::SGL 99.77::182-518 GO:0046982::protein heterodimerization activity confident hh_3hrp_A_2::126-141,143-165,176-183,185-241,243-252,259-271,281-283,291-333,340-340,342-361,363-396,399-399,420-454 confident psy5417 265 O57457::Band 4.1-like protein 4 ::Not known, binds calmodulin.::Danio rerio (taxid: 7955) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 93.33::195-224 PF00373::FERM_M 99.89::47-228 GO:0005737::cytoplasm confident hh_1h4r_A_1::12-30,32-90,163-264 very confident psy14290 332 Q9V3Z6::Myosin-VIIa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements: can function in cells as a single-molecule cargo transporter. A very slow and high-duty-ratio motor, may be suitable for tension maintenance of actin filaments. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Plays a key role in the formation of cellular projections and other actin-based functions required for embryonic and larval viability. Necessary for auditory transduction: plays a role in Johnston organ (JO) organization by functioning in scolopidial apical attachment and therefore to acoustic stimulus propagation from the antenna a2/a3 joint to transducing elements.::Drosophila melanogaster (taxid: 7227) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 96.90::188-283 PF00373::FERM_M 99.90::181-291 GO:0030898::actin-dependent ATPase activity confident hh_3pvl_A_1::13-35,47-63,67-75,77-140,144-148,152-228,230-325 very confident psy15745 170 Q9H4G0::Band 4.1-like protein 1 ::May function to confer stability and plasticity to neuronal membrane via multiple interactions, including the spectrin-actin-based cytoskeleton, integral membrane channels and membrane-associated guanylate kinases.::Homo sapiens (taxid: 9606) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 96.65::51-139 PF00373::FERM_M 99.89::47-146 GO:0033270::paranode region of axon confident hh_3qij_A_1::4-23,25-89,92-170 very confident psy9052 356 Q62130::Tyrosine-protein phosphatase non-receptor type 14 ::Protein tyrosine phosphatase which may be involved in the regulation of T-cell development. May play a role in the regulation of lymphangiogenesis.::Mus musculus (taxid: 10090) portable COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 94.99::18-117 PF00373::FERM_M 99.92::6-124 GO:0043229::intracellular organelle confident hh_1h4r_A_1::1-80,82-210 very confident psy16878 213 Q5RAB8::FERM, RhoGEF and pleckstrin domain-containing protein 1 ::May function as Rho-guanine nucleotide exchange factor.::Pongo abelii (taxid: 9601) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 97.04::87-177 PF00373::FERM_M 99.93::82-184 GO:0043234::protein complex confident hh_3qij_A_1::63-127,129-213 very confident psy2836 215 Q8BHD4::FERM domain-containing protein 3 ::Putative tumor suppressor gene that may be implicated in the origin and progression of lung cancer.::Mus musculus (taxid: 10090) portable COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 96.59::45-135 PF00373::FERM_M 99.94::33-142 GO:0043234::protein complex confident hh_1h4r_A_1::2-196 very confident psy586 472 P31976::Ezrin ::Probably involved in connections of major cytoskeletal structures to the plasma membrane. In epithelial cells, required for the formation of microvilli and membrane ruffles on the apical pole. Along with PLEKHG6, required for normal macropinocytosis.::Bos taurus (taxid: 9913) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 94.83::80-178 PF00373::FERM_M 99.90::72-185 GO:0051286::cell tip confident hh_1h4r_A_1::1-29,31-258 very confident psy9651 414 P11030::Acyl-CoA-binding protein ::Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters. It is also able to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor.::Rattus norvegicus (taxid: 10116) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 99.92::330-414 PF00887::ACBP 99.96::330-414 GO:0005634::nucleus confident hh_3flv_A_1::317-414 very confident psy10469 75 P07108::Acyl-CoA-binding protein ::Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters. It is also able to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor.::Homo sapiens (taxid: 9606) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 99.88::1-65 PF00887::ACBP 99.88::2-68 GO:0005829::cytosol confident hh_1st7_A_1::1-57,60-68 very confident psy10470 209 Q9D258::Acyl-CoA-binding domain-containing protein 7 ::Binds medium- and long-chain acyl-CoA esters.::Mus musculus (taxid: 10090) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 99.90::115-208 PF00887::ACBP 99.95::115-207 GO:0005829::cytosol confident hh_2lbb_A_1::117-130,136-136,138-153,155-207 very confident psy5114 394 Q5XG73::Acyl-CoA-binding domain-containing protein 5 ::Binds medium- and long-chain acyl-CoA esters.::Mus musculus (taxid: 10090) portable COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 99.89::82-170 PF00887::ACBP 99.94::82-169 GO:0031999::negative regulation of fatty acid beta-oxidation confident hh_3fp5_A_1::80-168,170-183 very confident psy15968 250 P31787::Acyl-CoA-binding protein ::Binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 99.93::6-92 PF00887::ACBP 99.97::6-92 GO:0043231::intracellular membrane-bounded organelle confident hh_3fp5_A_1::4-107 very confident psy630 347 A2VDR2::Acyl-CoA-binding domain-containing protein 6 ::Binds long-chain acyl-coenzyme A molecules with a strong preference for unsaturated C18:1-CoA, lower affinity for unsaturated C20:4-CoA, and very weak affinity for saturated C16:0-CoA. Does not bind fatty acids.::Bos taurus (taxid: 9913) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 99.73::96-177 PF00887::ACBP 99.76::95-178 GO:0044428::nuclear part confident hh_1l3k_A_1::4-92,94-137,143-153,156-166 very confident psy633 300 Q66JD7::Acyl-CoA-binding domain-containing protein 6 ::Binds long-chain acyl-coenzyme A molecules with a strong preference for unsaturated C18:1-CoA. Does not bind fatty acids.::Xenopus tropicalis (taxid: 8364) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 99.81::75-158 PF00887::ACBP 99.82::75-158 GO:0044444::cytoplasmic part confident hh_2y1l_E_1::142-160,166-168,170-224,226-258,260-294 very confident psy15599 2347 Q9Y4G6::Talin-2 ::As a major component of focal adhesion plaques that links integrin to the actin cytoskeleton, may play an important role in cell adhesion. Recruits PIP5K1C to focal adhesion plaques and strongly activates its kinase activity.::Homo sapiens (taxid: 9606) confident COG4281::ACB Acyl-CoA-binding protein [Lipid metabolism] 95.24::218-316 PF01608::I_LWEQ 100.00::2171-2319 GO:0005912::adherens junction confident hh_3fyq_A_1::1751-1787,1789-1942 very confident psy10030 484 Q54GN5::Probable UDP-N-acetylglucosamine pyrophosphorylase ::::Dictyostelium discoideum (taxid: 44689) confident COG4284::UDP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] 100.00::70-481 PF01704::UDPGP 100.00::61-432 GO:0005829::cytosol confident hh_2yqc_A_1::74-316,318-417,419-445,447-449,453-469,471-483 very confident psy15810 343 Q641W2::UPF0160 protein MYG1, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident COG4286::Uncharacterized conserved protein related to MYG1 family [Function unknown] 100.00::6-330 PF03690::UPF0160 100.00::9-330 GO:0005829::cytosol confident rp_1vt4_I_1::24-29,39-45,53-104,107-126,128-163,167-183,187-198,203-220,223-244,251-318,321-340 portable psy5646 106 Q9NPJ8::NTF2-related export protein 2 ::Regulator of protein export for NES-containing proteins. Also plays a role in mRNA nuclear export.::Homo sapiens (taxid: 9606) confident COG4319::Ketosteroid isomerase homolog [Function unknown] 93.05::2-95 PF02136::NTF2 99.93::1-98 GO:0006611::protein export from nucleus confident hh_3nv0_B_1::1-7,9-49,51-100 very confident psy8451 110 Q9D668::Arrestin domain-containing protein 2 ::::Mus musculus (taxid: 10090) portable COG4326::Spo0M Sporulation control protein [General function prediction only] 92.01::2-56 PF00339::Arrestin_N 99.84::2-62 GO:0050789::regulation of biological process confident hh_3ugu_A_1::5-63,65-79,83-110 very confident psy2841 178 P41126::60S ribosomal protein L13 ::::Drosophila melanogaster (taxid: 7227) very confident COG4352::RPL13 Ribosomal protein L13E [Translation, ribosomal structure and biogenesis] 100.00::8-121 PF01294::Ribosomal_L13e 100.00::1-178 GO:0022625::cytosolic large ribosomal subunit very confident hh_3u5e_L_1::1-45,47-127,129-131,141-166,169-178 very confident psy10295 115 Q69ZF3::Non-lysosomal glucosylceramidase ::Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide. Involved in sphingomyelin generation and prevention of glycolipid accumulation. May also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo.::Mus musculus (taxid: 10090) confident COG4354::Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] 99.97::1-112 PF04685::DUF608 100.00::1-107 GO:0005794::Golgi apparatus confident no hit no match psy10296 116 Q69ZF3::Non-lysosomal glucosylceramidase ::Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide. Involved in sphingomyelin generation and prevention of glycolipid accumulation. May also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo.::Mus musculus (taxid: 10090) confident COG4354::Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] 100.00::1-114 PF04685::DUF608 100.00::1-114 GO:0043231::intracellular membrane-bounded organelle confident hh_3c68_A_1::6-16,22-41,45-60,63-100 portable psy5277 314 Q69ZF3::Non-lysosomal glucosylceramidase ::Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide. Involved in sphingomyelin generation and prevention of glycolipid accumulation. May also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo.::Mus musculus (taxid: 10090) portable COG4354::Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] 100.00::25-311 PF04685::DUF608 100.00::24-306 GO:0043231::intracellular membrane-bounded organelle confident hh_2okx_A_1::9-35,38-41,48-88,90-166,168-168,170-171,174-183,189-199,201-207,224-224,231-241,244-270,272-275,277-312 confident psy8997 118 P29476::Nitric oxide synthase, brain ::Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. In the brain and peripheral nervous system, NO displays many properties of a neurotransmitter. Inhibitory transmitter for non-adrenergic and non-cholinergic nerves in the colorectum. Probably has nitrosylase activity and mediates cysteine S-nitrosylation of cytoplasmic target proteins such SRR. Inhibitory transmitter for non-adrenergic and non-cholinergic nerves in the colorectum.::Rattus norvegicus (taxid: 10116) confident COG4362::Nitric oxide synthase, oxygenase domain [Inorganic ion transport and metabolism / Amino acid transport and metabolism] 99.94::6-101 PF02898::NO_synthase 100.00::6-100 GO:0004517::nitric-oxide synthase activity confident hh_2ort_A_1::6-73,79-100 very confident psy8546 177 Q9Z0J4::Nitric oxide synthase, brain ::Produces nitric oxide (NO) which is a messenger molecule with diverse functions throughout the body. In the brain and peripheral nervous system, NO displays many properties of a neurotransmitter. Probably has nitrosylase activity and mediates cysteine S-nitrosylation of cytoplasmic target proteins such SRR. Isoform NNOS Mu may be an effector enzyme for the dystrophin complex.::Mus musculus (taxid: 10090) portable COG4362::Nitric oxide synthase, oxygenase domain [Inorganic ion transport and metabolism / Amino acid transport and metabolism] 100.00::1-121 PF02898::NO_synthase 100.00::1-124 GO:0005856::cytoskeleton confident hh_2ort_A_1::1-83,94-95,97-126 very confident psy2823 122 no hit no match COG4372::Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] 95.14::9-102 PF10174::Cast 99.02::15-117 GO:0048788::presynaptic cytoskeletal matrix assembled at active zones confident hh_1i84_S_1::21-37 confident psy2693 122 Q55FR9::Coatomer subunit alpha ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.::Dictyostelium discoideum (taxid: 44689) portable COG4391::Uncharacterized protein conserved in bacteria [Function unknown] 92.65::48-68 PF06957::COPI_C 100.00::2-101 GO:0005794::Golgi apparatus confident hh_3mkr_B_1::2-85,88-101 very confident psy2686 139 Q27954::Coatomer subunit alpha ::Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor.::Bos taurus (taxid: 9913) confident COG4391::Uncharacterized protein conserved in bacteria [Function unknown] 93.34::112-132 PF06957::COPI_C 100.00::1-139 GO:0005829::cytosol confident hh_3mkr_B_1::1-139 very confident psy13817 164 Q0MQH7::NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Pan troglodytes (taxid: 9598) confident COG4391::Uncharacterized protein conserved in bacteria [Function unknown] 98.44::31-72 PF10276::zf-CHCC 99.50::37-72 GO:0005739::mitochondrion confident hh_2jrr_A_2::133-164 confident psy1181 82 Q0MQH7::NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Pan troglodytes (taxid: 9598) confident COG4391::Uncharacterized protein conserved in bacteria [Function unknown] 99.71::32-77 PF10276::zf-CHCC 99.82::37-75 GO:0005747::mitochondrial respiratory chain complex I confident hh_2jvm_A_1::29-79 very confident psy2024 352 Q9JJK2::LanC-like protein 2 ::Necessary for abscisic acid (ABA) binding on the cell membrane and activation of the ABA signaling pathway in granulocytes.::Mus musculus (taxid: 10090) portable COG4403::LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] 98.35::41-209 PF05147::LANC_like 99.37::66-241 GO:0005856::cytoskeleton confident hh_3e6u_A_1::3-30,35-62,66-152,157-226,228-242 very confident psy13779 692 Q9Y0Y7::LanC-like protein 3 homolog ::::Drosophila melanogaster (taxid: 7227) portable COG4403::LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] 100.00::235-683 PF05147::LANC_like 100.00::236-689 GO:0005856::cytoskeleton confident hh_3e6u_A_2::1-123,128-134 very confident psy3913 423 Q9Y0Y7::LanC-like protein 3 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG4403::LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] 100.00::24-420 PF05147::LANC_like 100.00::53-420 GO:0009789::positive regulation of abscisic acid mediated signaling pathway confident hh_3e6u_A_1::4-46,52-75,78-81,84-101,107-107,110-149,153-154,158-248,250-280,290-381,383-422 very confident psy12840 469 Q5NDL9::EGF domain-specific O-linked N-acetylglucosamine transferase ::::Canis familiaris (taxid: 9615) confident COG4421::Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism] 99.78::167-448 PF04577::DUF563 99.97::183-410 GO:0005788::endoplasmic reticulum lumen confident rp_1vt4_I_1::93-129,131-180,183-212,219-220,228-243,248-251,255-286,291-338,343-358,365-366,380-409,419-436 portable psy3832 357 O60704::Protein-tyrosine sulfotransferase 2 ::Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides.::Homo sapiens (taxid: 9606) confident COG4424::Uncharacterized protein conserved in bacteria [Function unknown] 98.69::113-313 PF00685::Sulfotransfer_1 99.77::114-312 GO:0005783::endoplasmic reticulum confident hh_3ap1_A_1::97-166,168-170,173-278,281-313 very confident psy7627 158 Q9VYB7::Protein-tyrosine sulfotransferase ::Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides (By similarity). Has a role in protein secretion.::Drosophila melanogaster (taxid: 7227) confident COG4424::Uncharacterized protein conserved in bacteria [Function unknown] 97.03::18-141 PF00685::Sulfotransfer_1 99.62::50-145 GO:0005794::Golgi apparatus confident hh_3ap1_A_1::5-155 very confident psy14881 384 Q5GFD5::Heparan sulfate glucosamine 3-O-sulfotransferase 6 ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfo group to heparan sulfate. Unlike 3-OST-1, does not convert non-anticoagulant heparan sulfate to anticoagulant heparan sulfate.::Mus musculus (taxid: 10090) confident COG4424::Uncharacterized protein conserved in bacteria [Function unknown] 96.67::238-284 PF00685::Sulfotransfer_1 99.85::42-283 GO:0006024::glycosaminoglycan biosynthetic process confident hh_1t8t_A_1::36-152,213-292,325-384 very confident psy14973 111 Q9VLR5::RNA polymerase II transcriptional coactivator ::General coactivator that functions cooperatively with TAFs and mediates functional interactions between upstream activators and the general transcriptional machinery. Binds single-stranded DNA (By similarity). Binds specifically to the NssBF element, a short nucleotide sequence of the 1731 retrotransposon, to repress promoter activity.::Drosophila melanogaster (taxid: 7227) confident COG4443::Uncharacterized protein conserved in bacteria [Function unknown] 92.64::61-102 PF02229::PC4 99.91::48-101 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_1pcf_A_1::47-111 very confident psy3460 153 P29747::Cyclic AMP response element-binding protein A ::Transcriptional activator. Binds to fat body-specific enhancers of alcohol dehydrogenase (ADH) and yolk protein genes. BBF-2 may play a role in fat body gene expression. It binds the consensus sequence 5'-T[AC]NACGTAN[TG]C-3'.::Drosophila melanogaster (taxid: 7227) confident COG4467::Regulator of replication initiation timing [Replication, recombination, and repair] 91.22::62-108 PF00170::bZIP_1 99.50::37-99 GO:0031981::nuclear lumen confident hh_3a5t_A_1::4-28,30-103 very confident psy8521 75 Q9Y3Q8::TSC22 domain family protein 4 ::Transcriptional repressor.::Homo sapiens (taxid: 9606) confident COG4467::Regulator of replication initiation timing [Replication, recombination, and repair] 90.93::30-65 PF01166::TSC22 99.97::18-73 GO:0005634::nucleus confident hh_1dip_A_1::17-74 very confident psy2372 447 P0AE46::UPF0053 inner membrane protein YtfL ::::Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310) confident COG4536::CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism] 100.00::16-445 PF01595::DUF21 100.00::19-213 GO:0005886::plasma membrane confident hh_3oco_A_1::209-290,294-356 very confident psy17077 83 P0C588::Metal transporter CNNM4 ::Probable metal transporter. The interaction with the metal ion chaperone COX11 suggests that it may play a role in sensory neuron functions. May play a role in biomineralization and retinal function.::Rattus norvegicus (taxid: 10116) confident COG4536::CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism] 99.35::4-73 PF01595::DUF21 99.41::9-72 GO:0015693::magnesium ion transport confident no hit no match psy4843 277 Q5U2P1::Metal transporter CNNM2 ::Divalent metal cation transporter. Mediates transport of divalent metal cations in an order of Mg(2+) > Co(2+) > Mn(2+) > Sr(2+) > Ba(2+) > Cu(2+) > Fe(2+).::Rattus norvegicus (taxid: 10116) confident COG4536::CorB Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism] 99.95::84-276 PF01595::DUF21 99.96::88-277 GO:0015693::magnesium ion transport confident no hit no match psy11447 360 A3KMH1::von Willebrand factor A domain-containing protein 8 ::::Homo sapiens (taxid: 9606) confident COG4548::NorD Nitric oxide reductase activation protein [Inorganic ion transport and metabolism] 91.09::255-356 PF13519::VWA_2 98.54::211-353 GO:0005739::mitochondrion confident hh_1mf7_A_1::199-204,207-229,237-242,244-306,309-331,333-355 portable psy2760 333 Q15477::Helicase SKI2W ::Helicase; has ATPase activity. Component of the SKI complex which is thought to be involved in exosome-mediated RNA decay and associates with transcriptionally active genes in a manner dependent on PAF1 complex (PAF1C).::Homo sapiens (taxid: 9606) portable COG4581::Superfamily II RNA helicase [DNA replication, recombination, and repair] 99.87::186-322 PF00270::DEAD 99.67::196-324 GO:0044446::intracellular organelle part confident hh_3l9o_A_1::188-322 very confident psy6275 391 no hit no match COG4581::Superfamily II RNA helicase [DNA replication, recombination, and repair] 100.00::47-384 PF00270::DEAD 99.92::59-205 GO:0071013::catalytic step 2 spliceosome confident hh_3l9o_A_1::31-386 very confident psy13857 259 O59801::Putative ATP-dependent RNA helicase C550.03c ::RNA helicase component of the SKI complex involved in 3'-mRNA degradation pathway.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG4581::Superfamily II RNA helicase [DNA replication, recombination, and repair] 99.92::83-258 PF08148::DSHCT 99.97::142-258 GO:0043231::intracellular membrane-bounded organelle confident hh_3l9o_A_1::80-234,236-259 very confident psy13859 108 O59801::Putative ATP-dependent RNA helicase C550.03c ::RNA helicase component of the SKI complex involved in 3'-mRNA degradation pathway.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG4581::Superfamily II RNA helicase [DNA replication, recombination, and repair] 99.80::2-94 PF08148::DSHCT 99.97::1-94 GO:0043234::protein complex confident hh_3l9o_A_1::1-19,21-94 very confident psy6286 159 Q23223::mRNA transport homolog 4 ::::Caenorhabditis elegans (taxid: 6239) portable COG4581::Superfamily II RNA helicase [DNA replication, recombination, and repair] 99.97::2-159 PF08148::DSHCT 100.00::22-159 GO:0071013::catalytic step 2 spliceosome confident hh_3l9o_A_1::2-159 very confident psy2759 229 O59801::Putative ATP-dependent RNA helicase C550.03c ::RNA helicase component of the SKI complex involved in 3'-mRNA degradation pathway.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG4581::Superfamily II RNA helicase [DNA replication, recombination, and repair] 99.98::8-224 PF13234::rRNA_proc-arch 99.69::121-225 GO:0005829::cytosol confident hh_3l9o_A_1::8-81,83-157,163-224 very confident psy13858 70 O59801::Putative ATP-dependent RNA helicase C550.03c ::RNA helicase component of the SKI complex involved in 3'-mRNA degradation pathway.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG4581::Superfamily II RNA helicase [DNA replication, recombination, and repair] 99.77::1-67 no hit no match GO:0005829::cytosol confident hh_4a4z_A_1::1-43,49-67 very confident psy6840 439 O35052::Phosphatidate cytidylyltransferase 1 ::Provides CDP-diacylglycerol an important precursor for the synthesis of phosphatidylinositol (PtdIns), phosphatidylglycerol, and cardiolipin. Overexpression may amplify cellular signaling responses from cytokines. May also play an important role in the signal transduction mechanism of retina and neural cells (By similarity). May play an important role in phosphoinositide synthesis, prefers 1-stearoyl-2-arachidonoyl phosphatidic acid as substrate.::Rattus norvegicus (taxid: 10116) confident COG4589::Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only] 100.00::66-397 PF01148::CTP_transf_1 100.00::75-397 GO:0005635::nuclear envelope confident no hit no match psy9635 439 O35052::Phosphatidate cytidylyltransferase 1 ::Provides CDP-diacylglycerol an important precursor for the synthesis of phosphatidylinositol (PtdIns), phosphatidylglycerol, and cardiolipin. Overexpression may amplify cellular signaling responses from cytokines. May also play an important role in the signal transduction mechanism of retina and neural cells (By similarity). May play an important role in phosphoinositide synthesis, prefers 1-stearoyl-2-arachidonoyl phosphatidic acid as substrate.::Rattus norvegicus (taxid: 10116) confident COG4589::Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only] 100.00::66-397 PF01148::CTP_transf_1 100.00::75-397 GO:0005635::nuclear envelope confident no hit no match psy3876 477 Q7PWB8::Probable cytosolic Fe-S cluster assembly factor AGAP009023 ::Component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for maturation of extramitochondrial Fe/S proteins.::Anopheles gambiae (taxid: 7165) very confident COG4624::Iron only hydrogenase large subunit, C-terminal domain [General function prediction only] 100.00::62-464 PF02906::Fe_hyd_lg_C 100.00::114-406 GO:0097361::CIA complex confident hh_3lx4_A_1::94-104,112-202,204-285,288-307,311-411,415-469 very confident psy14046 857 P10351::Xanthine dehydrogenase ::Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid.::Drosophila melanogaster (taxid: 7227) confident COG4630::XdhA Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A [Nucleotide transport and metabolism] 100.00::1-467 PF00941::FAD_binding_5 100.00::171-351 GO:0044710::single-organism metabolic process confident hh_1dgj_A_1::537-723,725-842,845-856 very confident psy7003 1520 O32143::Probable xanthine dehydrogenase subunit E ::Oxidizes hypoxanthine and xanthine to uric acid.::Bacillus subtilis (strain 168) (taxid: 224308) portable COG4631::XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] 100.00::739-1517 PF02738::Ald_Xan_dh_C2 100.00::943-1519 GO:0008152::metabolic process confident hh_1dgj_A_1::740-820,825-825,851-851,854-903,905-918,920-932,944-951,954-1029,1032-1070,1149-1263,1266-1277,1294-1297,1299-1323,1325-1416,1418-1418,1422-1504,1510-1519 very confident psy14054 311 Q00519::Xanthine dehydrogenase/oxidase ::Key enzyme in purine degradation. Catalyzes the oxidation of hypoxanthine to xanthine. Catalyzes the oxidation of xanthine to uric acid. Contributes to the generation of reactive oxygen species.::Mus musculus (taxid: 10090) confident COG4631::XdhB Xanthine dehydrogenase, molybdopterin-binding subunit B [Nucleotide transport and metabolism] 100.00::20-310 PF02738::Ald_Xan_dh_C2 100.00::20-310 GO:0050302::indole-3-acetaldehyde oxidase activity confident hh_1dgj_A_1::24-33,36-191,194-204,206-210,212-227,230-310 very confident psy7609 226 Q9BUJ2::Heterogeneous nuclear ribonucleoprotein U-like protein 1 ::Acts as a basic transcriptional regulator. Represses basic transcription driven by several virus and cellular promoters. When associated with BRD7, activates transcription of glucocorticoid-responsive promoter in the absence of ligand-stimulation. Plays also a role in mRNA processing and transport. Binds avidly to poly(G) and poly(C) RNA homopolymers in vitro.::Homo sapiens (taxid: 9606) confident COG4639::Predicted kinase [General function prediction only] 94.06::30-122 PF13671::AAA_33 98.53::26-116 GO:0044428::nuclear part confident hh_1ly1_A_1::36-58,60-93,97-98,100-100,102-119 confident psy7991 81 Q5R578::MORN repeat-containing protein 4 ::::Pongo abelii (taxid: 9601) portable COG4642::Uncharacterized protein conserved in bacteria [Function unknown] 99.56::13-80 PF02493::MORN 98.60::50-71 GO:0005829::cytosol confident hh_1h3i_A_2::7-30,32-81 confident psy5667 79 Q5R578::MORN repeat-containing protein 4 ::::Pongo abelii (taxid: 9601) portable COG4642::Uncharacterized protein conserved in bacteria [Function unknown] 99.52::14-78 PF02493::MORN 98.58::50-72 GO:0005829::cytosol confident hh_1h3i_A_2::6-30,32-79 confident psy2919 158 Q9GKY7::Junctophilin-2 ::Junctophilins contribute to the formation of junctional membrane complexes (JMCs) which link the plasma membrane with the endoplasmic or sarcoplasmic reticulum in excitable cells. Provides a structural foundation for functional cross-talk between the cell surface and intracellular calcium release channels. JPH2 is necessary for proper intracellular Ca(2+) signaling in cardiac myocytes via its involvement in ryanodine receptor-mediated calcium ion release. Contributes to the construction of skeletal muscle triad junctions.::Oryctolagus cuniculus (taxid: 9986) confident COG4642::Uncharacterized protein conserved in bacteria [Function unknown] 99.78::26-151 PF02493::MORN 97.90::46-67 GO:0015278::calcium-release channel activity confident hh_1h3i_A_1::40-67,69-134,136-158 very confident psy10040 93 Q5R578::MORN repeat-containing protein 4 ::::Pongo abelii (taxid: 9601) confident COG4642::Uncharacterized protein conserved in bacteria [Function unknown] 99.06::3-67 PF02493::MORN 98.47::4-25 GO:0016028::rhabdomere confident hh_1h3i_A_2::3-49,54-66 very confident psy7846 281 Q8WYR4::Radial spoke head 1 homolog ::May play an important role in male meiosis.::Homo sapiens (taxid: 9606) portable COG4642::Uncharacterized protein conserved in bacteria [Function unknown] 99.77::21-162 PF02493::MORN 97.47::24-47 GO:0071944::cell periphery confident hh_1h3i_A_2::41-50,60-99,101-122,124-146,148-162,221-248 confident psy2298 366 Q9VLP7::Methyltransferase-like protein 14 homolog ::Probable methyltransferase.::Drosophila melanogaster (taxid: 7227) very confident COG4725::IME4 Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription] 100.00::123-322 PF05063::MT-A70 100.00::141-317 GO:0005634::nucleus confident hh_1g60_A_1::139-154,160-172,175-192,194-223,231-249 portable psy17828 1061 Q08723::26S proteasome regulatory subunit RPN8 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG4725::IME4 Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription] 99.98::337-497 PF05063::MT-A70 99.97::355-496 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2o95_A_1::632-674,676-773 very confident psy6638 273 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable COG4733::Phage-related protein, tail component [Function unknown] 97.19::112-252 PF00041::fn3 99.45::158-252 GO:0005509::calcium ion binding confident hh_2jll_A_1::12-101,106-160,162-166,169-183,186-205,213-253,255-262 very confident psy9139 197 Q4VA61::Down syndrome cell adhesion molecule-like protein 1 homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Promotes both isoneuronal self-avoidance for creating an orderly neurite arborization in retinal rod bipolar cells and heteroneuronal self-avoidance to maintain mosaic spacing between AII amacrine cells.::Mus musculus (taxid: 10090) portable COG4733::Phage-related protein, tail component [Function unknown] 90.91::78-169 PF00041::fn3 99.48::30-109 GO:0007275::multicellular organismal development confident hh_3lpw_A_1::25-169 very confident psy15129 308 Q64605::Receptor-type tyrosine-protein phosphatase S ::Interacts with LAR-interacting protein LIP.1.::Rattus norvegicus (taxid: 10116) portable COG4733::Phage-related protein, tail component [Function unknown] 95.57::7-187 PF00041::fn3 99.43::103-188 GO:0044763::single-organism cellular process confident hh_1x5h_A_1::83-198 very confident psy12060 978 Q9VN14::Contactin ::Required for organization of septate junctions and paracellular barrier functions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion.::Drosophila melanogaster (taxid: 7227) confident COG4733::Phage-related protein, tail component [Function unknown] 95.66::809-975 PF00059::Lectin_C 99.35::48-159 GO:0005919::pleated septate junction confident hh_2rik_A_1::409-532,538-556,558-584,586-593,596-676 very confident psy535 460 Q967D7::Protein turtle ::Essential protein that plays a role in the establishment of coordinated motor control.::Drosophila melanogaster (taxid: 7227) confident COG4733::Phage-related protein, tail component [Function unknown] 93.48::300-451 PF07679::I-set 99.48::57-144 GO:0044444::cytoplasmic part confident hh_2jll_A_1::56-61,63-86,88-138,141-160,162-176,180-243,245-298,300-347,349-384,410-454,456-460 very confident psy6380 103 Q05920::Pyruvate carboxylase, mitochondrial ::Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. Catalyzes in a tissue specific manner, the initial reactions of glucose (liver, kidney) and lipid (adipose tissue, liver, brain) synthesis from pyruvate.::Mus musculus (taxid: 10090) confident COG4770::Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] 100.00::13-102 PF00289::CPSase_L_chain 99.97::12-101 GO:0005829::cytosol confident hh_2dzd_A_1::12-29,31-102 very confident psy15251 720 Q99MR8::Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial ::::Mus musculus (taxid: 10090) confident COG4770::Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] 100.00::7-719 PF02786::CPSase_L_D2 100.00::121-329 GO:0006552::leucine catabolic process confident hh_3ouz_A_1::5-285,287-329,331-351,353-369,371-452 very confident psy11786 108 Q2QMG2::Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG4770::Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] 100.00::3-107 PF02786::CPSase_L_D2 99.97::5-106 GO:0031090::organelle membrane confident rp_2vpq_A_1::36-94 very confident psy10619 246 Q58626::Pyruvate carboxylase subunit A ::Pyruvate carboxylase catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.::Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232) confident COG4770::Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism] 100.00::1-210 PF15632::ATPgrasp_Ter 99.93::1-191 GO:0031090::organelle membrane confident bp_3n6r_A_1::12-183 very confident psy2168 516 Q5U3I0::Sorting and assembly machinery component 50 homolog B ::May be required for the assembly pathway of mitochondrial outer membrane proteins.::Danio rerio (taxid: 7955) confident COG4775::Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane] 100.00::24-515 PF01103::Bac_surface_Ag 100.00::143-515 GO:0005739::mitochondrion confident hh_2qdz_A_1::24-31,35-60,64-69,72-85,88-97,102-104,106-174,178-235,238-238,241-260,265-279,310-312,326-370,376-402,411-426,429-431,433-456,465-480,482-515 confident psy768 475 Q9D8H7::Metalloendopeptidase OMA1, mitochondrial ::Metalloprotease that is part of the quality control system in the inner membrane of mitochondria. Following stress conditions that induce loss of mitochondrial membrane potential, mediates cleavage of OPA1 at S1 position, leading to OPA1 inactivation and negative regulation of mitochondrial fusion. Its role in mitochondrial quality control is essential for regulating lipid metabolism as well as to maintain body temperature and energy expenditure under cold-stress conditions.::Mus musculus (taxid: 10090) confident COG4783::Putative Zn-dependent protease, contains TPR repeats [General function prediction only] 100.00::181-440 PF01435::Peptidase_M48 99.93::228-432 GO:0005739::mitochondrion confident hh_3c37_A_1::183-213,218-241,246-311,314-314,316-320,322-325,328-333,335-337,339-339,344-347,362-407,410-410,412-440 very confident psy7864 201 Q9DBB4::N-alpha-acetyltransferase 16, NatA auxiliary subunit ::May belong to a complex displaying N-terminal acetyltransferase activity.::Mus musculus (taxid: 10090) portable COG4783::Putative Zn-dependent protease, contains TPR repeats [General function prediction only] 95.98::71-198 PF12569::NARP1 99.95::1-116 GO:0005667::transcription factor complex confident hh_1elr_A_1::70-121,123-137 portable psy11283 314 B8FTK7::Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta ::Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.::Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) (taxid: 272564) confident COG4799::Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] 100.00::11-314 PF01039::Carboxyl_trans 100.00::42-313 GO:0004658::propionyl-CoA carboxylase activity confident hh_3n6r_B_1::16-313 very confident psy5157 129 Q99MN9::Propionyl-CoA carboxylase beta chain, mitochondrial ::::Mus musculus (taxid: 10090) confident COG4799::Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] 100.00::5-128 PF01039::Carboxyl_trans 99.96::5-128 GO:0004658::propionyl-CoA carboxylase activity confident rp_1x0u_A_1::43-109 very confident psy5160 203 Q99MN9::Propionyl-CoA carboxylase beta chain, mitochondrial ::::Mus musculus (taxid: 10090) confident COG4799::Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] 100.00::10-203 PF01039::Carboxyl_trans 100.00::10-201 GO:0004658::propionyl-CoA carboxylase activity confident hh_1x0u_A_1::10-203 very confident psy10435 4605 P11497::Acetyl-CoA carboxylase 1 ::Catalyzes the rate-limiting reaction in the biogenesis of long-chain fatty acids. Carries out three functions: biotin carboxyl carrier protein, biotin carboxylase and carboxyltransferase.::Rattus norvegicus (taxid: 10116) portable COG4799::Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism] 100.00::2472-3157 PF08326::ACC_central 100.00::522-1200 GO:0004075::biotin carboxylase activity confident hh_2x24_A_1::2354-2409,2418-2449,2501-2789,2880-3216,3219-3276 very confident psy2651 342 Q99574::Neuroserpin ::Serine protease inhibitor that inhibits plasminogen activators and plasmin but not thrombin. May be involved in the formation or reorganization of synaptic connections as well as for synaptic plasticity in the adult nervous system. May protect neurons from cell damage by tissue-type plasminogen activator.::Homo sapiens (taxid: 9606) portable COG4826::Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] 100.00::80-341 PF00079::Serpin 100.00::85-340 GO:0005829::cytosol confident hh_4au2_A_1::80-86,88-95,113-161,171-250,253-304,306-331,335-341 very confident psy2650 108 Q99574::Neuroserpin ::Serine protease inhibitor that inhibits plasminogen activators and plasmin but not thrombin. May be involved in the formation or reorganization of synaptic connections as well as for synaptic plasticity in the adult nervous system. May protect neurons from cell damage by tissue-type plasminogen activator.::Homo sapiens (taxid: 9606) portable COG4826::Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] 99.95::1-108 PF00079::Serpin 99.95::1-108 GO:0043229::intracellular organelle confident hh_1sek_A_1::1-5,8-21,25-80,82-108 very confident psy7902 342 P50453::Serpin B9 ::Granzyme B inhibitor.::Homo sapiens (taxid: 9606) confident COG4826::Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] 100.00::1-339 PF00079::Serpin 100.00::1-337 GO:0043434::response to peptide hormone stimulus confident hh_3nda_A_1::1-14,16-65,68-79,81-140,142-196,199-211,214-221,223-336 very confident psy5102 357 Q96P15::Serpin B11 ::Has no serine protease inhibitory activity, probably due to mutations in the scaffold impairing conformational change.::Homo sapiens (taxid: 9606) portable COG4826::Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] 100.00::10-310 PF00079::Serpin 100.00::14-308 GO:0044421::extracellular region part confident hh_3nda_A_1::6-30,32-32,34-111,113-231,233-241,243-307 very confident psy2668 65 O73790::Heterochromatin-associated protein MENT ::DNA-binding protein that promotes DNA condensation into transcriptionally inactive heterochromatin in terminally differentiated avian blood cells. Promotes tight packing of nucleosomes into spherical clusters by binding to linker DNA and subsequent oligomerization. Act as a cysteine protease inhibitor towards CTSL1 (cathepsin L1) and CTSL2 (cathepsin L2), but does not inhibit serine proteases.::Gallus gallus (taxid: 9031) confident COG4826::Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] 99.49::2-65 PF00079::Serpin 99.28::1-45 GO:0045861::negative regulation of proteolysis confident hh_2h4p_A_1::1-14,16-48 very confident psy2655 84 Q99574::Neuroserpin ::Serine protease inhibitor that inhibits plasminogen activators and plasmin but not thrombin. May be involved in the formation or reorganization of synaptic connections as well as for synaptic plasticity in the adult nervous system. May protect neurons from cell damage by tissue-type plasminogen activator.::Homo sapiens (taxid: 9606) portable COG4826::Serine protease inhibitor [Posttranslational modification, protein turnover, chaperones] 99.72::7-83 PF00079::Serpin 99.63::10-83 GO:0045861::negative regulation of proteolysis confident hh_1sek_A_1::13-83 very confident psy11384 137 Q8LPJ7::40S ribosomal protein S26-2 ::::Arabidopsis thaliana (taxid: 3702) very confident COG4830::RPS26B Ribosomal protein S26 [Translation, ribosomal structure and biogenesis] 100.00::1-97 PF01283::Ribosomal_S26e 100.00::1-110 GO:0022627::cytosolic small ribosomal subunit very confident hh_2xzm_5_1::1-105 very confident psy2558 348 P04988::Cysteine proteinase 1 ::Cysteine proteinases 1 and 2 are believed to participate in the breakdown of protein during differentiation of Dictyostelium as a response to starvation.::Dictyostelium discoideum (taxid: 44689) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.97::124-334 PF00112::Peptidase_C1 100.00::126-347 GO:0005615::extracellular space very confident hh_1yal_A_1::126-203,207-253,255-276,280-282,286-299,306-348 very confident psy3964 65 P09668::Pro-cathepsin H ::Important for the overall degradation of proteins in lysosomes.::Homo sapiens (taxid: 9606) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.30::9-50 PF00112::Peptidase_C1 99.89::6-64 GO:0005615::extracellular space confident hh_1yal_A_1::8-65 very confident psy1664 524 P00787::Cathepsin B ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Rattus norvegicus (taxid: 10116) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.92::95-340 PF00112::Peptidase_C1 100.00::97-350 GO:0005730::nucleolus confident hh_3cbj_A_1::95-201,212-216,348-357,359-447,455-498 very confident psy1911 342 P00787::Cathepsin B ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Rattus norvegicus (taxid: 10116) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.39::53-153 PF00112::Peptidase_C1 99.89::62-165 GO:0005737::cytoplasm confident no hit no match psy15348 298 P00787::Cathepsin B ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Rattus norvegicus (taxid: 10116) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.90::18-247 PF00112::Peptidase_C1 100.00::5-260 GO:0005737::cytoplasm confident hh_3cbj_A_1::6-15,17-52,56-71,76-122,124-132,134-143,145-177,183-194,196-201,203-265 very confident psy15353 344 P00787::Cathepsin B ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Rattus norvegicus (taxid: 10116) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.95::81-327 PF00112::Peptidase_C1 100.00::84-341 GO:0005764::lysosome confident hh_3cbj_A_1::82-150,154-199,201-209,211-220,222-281,283-287,289-344 very confident psy8704 74 P43510::Cathepsin B-like cysteine proteinase 6 ::::Caenorhabditis elegans (taxid: 6239) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 97.75::1-26 PF00112::Peptidase_C1 99.89::1-74 GO:0005764::lysosome confident hh_3cbj_A_1::1-74 very confident psy8713 309 A1E295::Cathepsin B ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Sus scrofa (taxid: 9823) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.86::248-292 PF00112::Peptidase_C1 100.00::84-305 GO:0005773::vacuole confident hh_3cbj_A_1::81-205,243-262,265-309 very confident psy394 66 P25776::Oryzain alpha chain ::::Oryza sativa subsp. japonica (taxid: 39947) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 97.99::42-66 PF00112::Peptidase_C1 98.93::43-66 GO:0005773::vacuole confident hh_2o6x_A_1::1-23,29-39,41-66 very confident psy15346 280 Q5R6D1::Cathepsin B ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Pongo abelii (taxid: 9601) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.38::188-229 PF00112::Peptidase_C1 100.00::1-242 GO:0005773::vacuole confident hh_3cbj_A_1::1-42,44-54,56-66,68-116,140-151,161-161,188-246 very confident psy10824 185 P00787::Cathepsin B ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Rattus norvegicus (taxid: 10116) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 98.96::75-123 PF00112::Peptidase_C1 99.93::78-185 GO:0005829::cytosol confident hh_3qsd_A_1::77-143,146-180 very confident psy5095 192 P43234::Cathepsin O ::Proteolytic enzyme possibly involved in normal cellular protein degradation and turnover.::Homo sapiens (taxid: 9606) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.78::33-167 PF00112::Peptidase_C1 100.00::1-180 GO:0005829::cytosol confident hh_3cbj_A_1::1-118,121-184 very confident psy12185 317 P43234::Cathepsin O ::Proteolytic enzyme possibly involved in normal cellular protein degradation and turnover.::Homo sapiens (taxid: 9606) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.67::136-312 PF00112::Peptidase_C1 100.00::138-316 GO:0005829::cytosol confident hh_1yal_A_1::138-195,197-215,218-254,256-268,270-296,300-316 very confident psy282 233 P56203::Cathepsin W ::May have a specific function in the mechanism or regulation of T-cell cytolytic activity.::Mus musculus (taxid: 10090) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.48::140-219 PF00112::Peptidase_C1 99.93::1-133 GO:0005829::cytosol confident hh_3qt4_A_2::111-122,124-168,171-228 very confident psy7632 240 P56203::Cathepsin W ::May have a specific function in the mechanism or regulation of T-cell cytolytic activity.::Mus musculus (taxid: 10090) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.91::11-225 PF00112::Peptidase_C1 100.00::3-238 GO:0005829::cytosol confident hh_3cbj_A_1::11-22,24-58,61-80,82-148,150-152,155-160,163-174,176-176,198-239 very confident psy274 187 P56203::Cathepsin W ::May have a specific function in the mechanism or regulation of T-cell cytolytic activity.::Mus musculus (taxid: 10090) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.72::33-174 PF00112::Peptidase_C1 100.00::1-183 GO:0005829::cytosol confident hh_3cbj_A_1::1-35,37-79,81-120,124-186 very confident psy3960 351 Q3ZKN1::Cathepsin K ::Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation.::Canis familiaris (taxid: 9615) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.94::136-341 PF00112::Peptidase_C1 100.00::137-350 GO:0005829::cytosol confident hh_3f75_A_1::136-221,223-261,263-286,288-292,296-351 very confident psy667 392 Q80LP4::Viral cathepsin ::Cysteine protease that plays an essential role in host liquefaction to facilitate horizontal transmission of the virus. May participate in the degradation of foreign protein expressed by the baculovirus system.::Adoxophyes honmai (taxid: 85585) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.94::151-375 PF00112::Peptidase_C1 100.00::152-388 GO:0005829::cytosol confident hh_3cbj_A_1::150-184,208-284,286-326,330-391 very confident psy7460 1026 Q9R013::Cathepsin F ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Mus musculus (taxid: 10090) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.95::740-997 PF00112::Peptidase_C1 100.00::376-590 GO:0005829::cytosol confident hh_3qt4_A_2::651-720,725-726,729-737,739-751,753-834,838-847,849-893,896-956 very confident psy1727 240 Q9VN93::Putative cysteine proteinase CG12163 ::May have a role in autophagic cell death.::Drosophila melanogaster (taxid: 7227) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.58::75-221 PF00112::Peptidase_C1 100.00::62-235 GO:0005829::cytosol confident hh_1s4v_A_1::62-86,88-89,91-138,140-162,166-167,171-186,192-211,214-230,232-235 very confident psy14862 263 Q7XR52::Cysteine protease 1 ::Cysteine protease that may play a role pollen development.::Oryza sativa subsp. japonica (taxid: 39947) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.18::166-207 PF00112::Peptidase_C1 99.86::168-261 GO:0006508::proteolysis confident hh_3qj3_A_1::73-149,152-182,184-238,241-241,244-262 very confident psy403 233 Q95029::Cathepsin L ::Important for the overall degradation of proteins in lysosomes. Essential for adult male and female fertility. May play a role in digestion.::Drosophila melanogaster (taxid: 7227) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.30::81-136 PF00112::Peptidase_C1 100.00::2-232 GO:0006508::proteolysis confident hh_1o0e_A_1::2-25,57-62,65-91,93-116,118-121,123-135,194-233 very confident psy4960 341 P09668::Pro-cathepsin H ::Important for the overall degradation of proteins in lysosomes.::Homo sapiens (taxid: 9606) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.96::125-326 PF00112::Peptidase_C1 100.00::126-339 GO:0010815::bradykinin catabolic process confident hh_3cbj_A_1::125-238,240-276,280-341 very confident psy1705 309 P43235::Cathepsin K ::Closely involved in osteoclastic bone resorption and may participate partially in the disorder of bone remodeling. Displays potent endoprotease activity against fibrinogen at acid pH. May play an important role in extracellular matrix degradation.::Homo sapiens (taxid: 9606) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.96::96-294 PF00112::Peptidase_C1 100.00::98-308 GO:0019886::antigen processing and presentation of exogenous peptide antigen via MHC class II confident hh_3cbj_A_1::96-177,179-213,215-237,239-252,254-308 very confident psy10826 175 P43507::Cathepsin B-like cysteine proteinase 3 ::::Caenorhabditis elegans (taxid: 6239) confident COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.50::1-78 PF00112::Peptidase_C1 99.94::1-86 GO:0050896::response to stimulus confident hh_3cbj_A_1::1-86,88-98 very confident psy11694 655 P25774::Cathepsin S ::Thiol protease. Key protease responsible for the removal of the invariant chain from MHC class II molecules. The bond-specificity of this proteinase is in part similar to the specificities of cathepsin L and cathepsin N.::Homo sapiens (taxid: 9606) portable COG4870::Cysteine protease [Posttranslational modification, protein turnover, chaperones] 99.91::294-655 PF00112::Peptidase_C1 100.00::296-495 GO:0071944::cell periphery confident hh_1o0e_A_1::296-389,392-395,398-399,401-425,427-495 very confident psy9208 446 Q6IRK9::Carboxypeptidase Q ::Carboxypeptidase that may play an important role in the hydrolysis of circulating peptides. Catalyzes more efficiently the hydrolysis of dipeptides with unsubstituted terminals into amino acids. May play a role in thyroxin hormone liberation from its TG/thyroglobulin precursor.::Rattus norvegicus (taxid: 10116) confident COG4882::Predicted aminopeptidase, Iap family [General function prediction only] 99.96::79-444 PF04389::Peptidase_M28 99.94::274-423 GO:0070573::metallodipeptidase activity confident hh_3iib_A_1::52-60,62-62,66-241,243-376,378-446 very confident psy10537 2994 O61967::Protein lap1 ::Critical role in assembling adherens junctions; adapter protein involved in polarizing protein trafficking in epithelial cells. Necessary to maintain, not establish, the entire terminal web (organelle-depleted, intermediate filament-rich layer of cytoplasm that underlies the apical microvilli of polarized epithelial cells) or brush border assembly at the apical surface gut cells. Required for correct localization of ifb-2 intermediate filaments in the terminal web.::Caenorhabditis elegans (taxid: 6239) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.18::516-752 PF00595::PDZ 99.19::2000-2084 GO:0005886::plasma membrane confident hh_2z81_A_1::266-304,311-332,339-368,371-372,401-467,507-695,709-733,736-752,756-776,778-814,832-849 very confident psy16377 1344 P70389::Insulin-like growth factor-binding protein complex acid labile subunit ::May have an important role in regulating the access of circulating IGFs to the tissues.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.89::192-381 PF01582::TIR 99.86::1036-1194 GO:0007155::cell adhesion confident hh_2z81_A_1::827-841,846-867,870-929,932-942 very confident psy5670 1269 P35858::Insulin-like growth factor-binding protein complex acid labile subunit ::Involved in protein-protein interactions that result in protein complexes, receptor-ligand binding or cell adhesion.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.89::486-669 PF01582::TIR 99.93::1087-1216 GO:0051707::response to other organism confident hh_2z81_A_1::269-289,293-331,334-480,502-575,592-597,600-671,675-678,803-820,822-847,851-867,872-893,896-953,956-967 very confident psy1142 442 O88984::Nuclear RNA export factor 1 ::Involved in the nuclear export of mRNA species bearing retroviral constitutive transport elements (CTE) and in the export of mRNA from the nucleus to the cytoplasm. The NXF1-NXT1 heterodimer is involved in the export of HSP70 mRNA in conjunction with ALYREF/THOC4 and THOC5.::Rattus norvegicus (taxid: 10116) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 94.91::83-149 PF03943::TAP_C 99.89::392-442 GO:0042405::nuclear inclusion body confident hh_3rw6_A_1::1-134,136-182 very confident psy10487 610 O94898::Leucine-rich repeats and immunoglobulin-like domains protein 2 ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.75::37-214 PF07679::I-set 99.50::261-356 GO:0044459::plasma membrane part confident hh_2xot_A_1::19-32,37-77,79-246,249-249,252-261,265-286,288-307,313-318,320-357 very confident psy12695 369 D4A1J9::Leucine-rich repeat and fibronectin type-III domain-containing protein 5 ::Cell adhesion molecule that mediates homophilic cell-cell adhesion in a Ca(2+)-independent manner. Promotes neurite outgrowth in hippocampal neurons.::Rattus norvegicus (taxid: 10116) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 97.34::47-139 PF07679::I-set 99.55::146-244 GO:0044464::cell part confident hh_2r9u_A_1::31-42,47-146 very confident psy18121 109 Q5VUJ6::Leucine-rich repeat and calponin homology domain-containing protein 2 ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 95.06::33-98 PF13855::LRR_8 97.85::32-89 GO:0005938::cell cortex confident hh_4b8c_D_2::32-48,51-61,63-65,68-107 confident psy17693 152 Q6NUI6::Chondroadherin-like protein ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 97.69::47-149 PF13855::LRR_8 99.39::65-127 GO:0009605::response to external stimulus confident hh_2z81_A_1::48-73,75-86,89-149 very confident psy8923 273 Q13045::Protein flightless-1 homolog ::May play a role as coactivator in transcriptional activation by hormone-activated nuclear receptors (NR) and acts in cooperation with NCOA2 and CARM1. Involved in estrogen hormone signaling. Involved in early embryonic development (By similarity). May play a role in regulation of cytoskeletal rearrangements involved in cytokinesis and cell migration.::Homo sapiens (taxid: 9606) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 97.87::23-87 PF13855::LRR_8 99.21::21-81 GO:0030154::cell differentiation confident hh_1d0n_A_1::40-58,61-147,149-171,178-272 very confident psy17697 110 O70210::Chondroadherin ::Promotes attachment of chondrocytes, fibroblasts, and osteoblasts. This binding is mediated (at least for chondrocytes and fibroblasts) by the integrin alpha(2)beta(1). May play an important role in the regulation of chondrocyte growth and proliferation.::Rattus norvegicus (taxid: 10116) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 96.57::49-108 PF13855::LRR_8 99.22::39-103 GO:0030510::regulation of BMP signaling pathway confident hh_2xot_A_1::15-44,49-63,65-108 very confident psy14513 209 Q9WVB4::Slit homolog 3 protein ::May act as molecular guidance cue in cellular migration, and function may be mediated by interaction with roundabout homolog receptors.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 97.03::20-106 PF13855::LRR_8 99.16::31-84 GO:0031323::regulation of cellular metabolic process confident hh_2r9u_A_1::3-14,19-26,31-57,59-138,143-152 very confident psy16571 150 O75093::Slit homolog 1 protein ::Thought to act as molecular guidance cue in cellular migration, and function appears to be mediated by interaction with roundabout homolog receptors. During neural development involved in axonal navigation at the ventral midline of the neural tube and projection of axons to different regions (By similarity). SLIT1 and SLIT2 together seem to be essential for midline guidance in the forebrain by acting as repulsive signal preventing inappropriate midline crossing by axons projecting from the olfactory bulb.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 97.64::10-92 PF13855::LRR_8 99.36::9-71 GO:0044763::single-organism cellular process confident hh_3zyi_A_1::5-19,21-45,47-145 very confident psy10386 166 Q9R1B9::Slit homolog 2 protein ::Thought to act as molecular guidance cue in cellular migration, and function appears to be mediated by interaction with roundabout homolog receptors. During neural development involved in axonal navigation at the ventral midline of the neural tube and projection of axons to different regions. SLIT1 and SLIT2 seem to be essential for midline guidance in the forebrain by acting as repulsive signal preventing inappropriate midline crossing by axons projecting from the olfactory bulb. In spinal chord development, may play a role in guiding commissural axons once they reached the floor plate by modulating the response to netrin. In vitro, silences the attractive effect of NTN1 but not its growth-stimulatory effect and silencing requires the formation of a ROBO1-DCC complex. May be implicated in spinal chord midline post-crossing axon repulsion. In vitro, only commissural axons that crossed the midline responded to SLIT2. In the developing visual system, appears to function as repellent for retinal ganglion axons by providing a repulsion that directs these axons along their appropriate paths prior to, and after passage through, the optic chiasm. In vitro, collapses and repels retinal ganglion cell growth cones. Seems to play a role in branching and arborization of CNS sensory axons, and in neuronal cell migration. In vitro, Slit homolog 2 protein N-product, but not Slit homolog 2 protein C-product, repels olfactory bulb (OB) but not dorsal root ganglia (DRG) axons, induces OB growth cones collapse and induces branching of DRG axons. Seems to be involved in regulating leukocyte migration.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 96.36::2-65 PF13855::LRR_8 99.35::1-59 GO:0050896::response to stimulus confident hh_2r9u_A_1::1-15,18-109 very confident psy11652 325 O94898::Leucine-rich repeats and immunoglobulin-like domains protein 2 ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.26::99-296 PF14580::LRR_9 99.29::54-169 GO:0005488::binding confident hh_3v47_A_1::27-47,49-51,53-208,210-317 very confident psy10538 288 Q4H4B6::Protein scribble homolog ::Scaffold protein involved in different aspects of polarized cells differentiation regulating epithelial and neuronal morphogenesis. Regulates the caudal migration of the nVII motor neurons. Required for convergent extension movements during gastrulation.::Danio rerio (taxid: 7955) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.37::70-280 PF14580::LRR_9 99.35::122-266 GO:0005576::extracellular region confident hh_3rfs_A_1::44-62,80-81,83-103,120-182,197-229,232-272 very confident psy12044 767 Q9HCJ2::Leucine-rich repeat-containing protein 4C ::May promote neurite outgrowth of developing thalamic neurons.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.67::50-207 PF14580::LRR_9 98.99::50-160 GO:0005622::intracellular confident hh_2xot_A_1::14-26,31-71,73-240,243-246,249-255,259-280,282-301,305-310,318-355 very confident psy4164 147 P83876::Thioredoxin-like protein 4A ::Essential role in pre-mRNA splicing.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 90.35::32-102 PF14580::LRR_9 99.81::37-123 GO:0005681::spliceosomal complex confident hh_1ds9_A_1::30-63,66-72,75-115 very confident psy13376 417 Q5XI54::Leucine-rich repeat-containing protein 48 ::::Rattus norvegicus (taxid: 10116) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.04::57-224 PF14580::LRR_9 99.84::79-239 GO:0005737::cytoplasm confident hh_1dce_A_1::6-37,41-52,60-90,95-220 very confident psy4257 419 Q6UXM1::Leucine-rich repeats and immunoglobulin-like domains protein 3 ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.53::30-238 PF14580::LRR_9 99.47::10-151 GO:0005737::cytoplasm confident hh_4ecn_A_1::1-112,114-133,135-160,167-286,295-308 very confident psy18204 435 P43333::U2 small nuclear ribonucleoprotein A' ::This protein is associated with sn-RNP U2. It helps the A' protein to bind stem loop IV of U2 snRNA.::Arabidopsis thaliana (taxid: 3702) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.90::16-189 PF14580::LRR_9 99.92::1-153 GO:0005829::cytosol confident rp_1a9n_A_1::1-153 very confident psy3567 277 Q5FVI3::Leucine-rich repeat-containing protein 57 ::::Rattus norvegicus (taxid: 10116) very confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.47::57-252 PF14580::LRR_9 99.26::124-254 GO:0005886::plasma membrane confident hh_1ogq_A_2::13-33,48-75,77-146,148-227,229-234,236-252 very confident psy8464 111 Q28XE2::Acidic leucine-rich nuclear phosphoprotein 32 family member A ::Implicated in a number of cellular processes, including proliferation, differentiation, caspase-dependent and caspase-independent apoptosis, suppression of transformation (tumor suppressor), inhibition of protein phosphatase 2A, regulation of mRNA trafficking and stability, and inhibition of acetyltransferases as part of the INHAT (inhibitor of histone acetyltransferases) complex.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.57::3-96 PF14580::LRR_9 99.43::15-108 GO:0016023::cytoplasmic membrane-bounded vesicle confident rp_2ell_A_1::19-107 very confident psy8550 332 Q149C3::Leucine-rich repeat and immunoglobulin-like domain containing-NOGO receptor-interacting protein 4 ::::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.42::136-325 PF14580::LRR_9 99.38::184-311 GO:0016477::cell migration confident hh_3zyi_A_1::103-331 very confident psy10956 582 Q1L8Y7::Leucine-rich repeat protein SHOC-2 ::Regulatory subunit of protein phosphatase 1 (PP1c) that acts as a M-Ras/MRAS effector and participates in MAPK pathway activation. Upon M-Ras/MRAS activation, targets PP1c to specifically dephosphorylate the 'Ser-259' inhibitory site of raf1 kinase and stimulate raf1 activity at specialized signaling complexes.::Danio rerio (taxid: 7955) very confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.45::128-324 PF14580::LRR_9 99.30::110-246 GO:0019903::protein phosphatase binding very confident hh_3a79_B_1::102-121,124-188,191-231,234-326,329-368,370-397,399-492,495-531,533-559 very confident psy15002 357 Q9GZU5::Nyctalopin ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.39::142-349 PF14580::LRR_9 99.35::186-295 GO:0030336::negative regulation of cell migration confident hh_1xku_A_1::44-49,55-61,66-80,88-136,138-158,162-229,233-256,258-299,301-356 very confident psy3787 263 Q9SGP2::Receptor-like protein kinase HSL1 ::::Arabidopsis thaliana (taxid: 3702) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.22::8-226 PF14580::LRR_9 99.34::20-151 GO:0031012::extracellular matrix confident hh_3m19_A_1::4-17,20-24,27-136 very confident psy13911 183 Q8CHE4::PH domain leucine-rich repeat-containing protein phosphatase 1 ::Protein phosphatase that mediates dephosphorylation of 'Ser-473' of AKT1, 'Ser-660' of PRKCB, and 'Ser-657' of PRKCA. AKT1 regulates the balance between cell survival and apoptosis through a cascade that primarily alters the function of transcription factors that regulate pro- and antiapoptotic genes. Dephosphorylation of 'Ser-473' of AKT1 triggers apoptosis and suppression of tumor growth. Controls the phosphorylation of AKT2 and AKT3 more efficiently than that of AKT1. Dephosphorylation of PRKCA and PRKCB leads to their destabilization and degradation. May act as a negative regulator of K-Ras signaling in membrane rafts.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.35::7-181 PF14580::LRR_9 99.47::35-140 GO:0031090::organelle membrane confident hh_3m19_A_1::11-31,34-181 very confident psy15407 604 P24014::Protein slit ::A short-range repellent, controlling axon crossing of the midline and a long-range chemorepellent, controlling mesoderm migration and patterning away from the midline. May interact with extracellular matrix molecules. Repulsive ligand for the guidance receptor roundabout (robo) and prevents inappropriate midline crossing by Robo-expressing axons.::Drosophila melanogaster (taxid: 7227) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.12::217-301 PF14580::LRR_9 99.49::217-301 GO:0031323::regulation of cellular metabolic process confident hh_2v9t_B_1::85-133,135-164,217-350 very confident psy10233 207 Q9D2H9::Dynein assembly factor 1, axonemal ::Cilium-specific protein required for the stability of the ciliary architecture. Plays a role in cytoplasmic preassembly of dynein arms (By similarity). Involved in regulation of microtubule-based cilia and actin-based brush border microvilli.::Mus musculus (taxid: 10090) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.97::22-194 PF14580::LRR_9 99.81::51-207 GO:0035469::determination of pancreatic left/right asymmetry confident hh_1ds9_A_1::60-124,128-204 very confident psy3785 184 Q80VQ1::Leucine-rich repeat-containing protein 1 ::::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.16::28-177 PF14580::LRR_9 99.35::25-151 GO:0043229::intracellular organelle confident hh_3rfs_A_1::21-41,45-179 very confident psy4258 245 O94898::Leucine-rich repeats and immunoglobulin-like domains protein 2 ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.43::60-238 PF14580::LRR_9 99.32::39-97 GO:0043234::protein complex confident hh_3rfs_A_1::11-22,24-30,33-190,197-222 very confident psy8879 694 P35858::Insulin-like growth factor-binding protein complex acid labile subunit ::Involved in protein-protein interactions that result in protein complexes, receptor-ligand binding or cell adhesion.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.19::144-332 PF14580::LRR_9 99.09::103-248 GO:0043234::protein complex confident hh_2z81_A_1::74-89,95-142,144-166,168-330,332-354,357-415 very confident psy1563 152 Q6DHB1::Dynein light chain 1, axonemal ::::Danio rerio (taxid: 7955) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.57::13-56 PF14580::LRR_9 99.87::5-152 GO:0043234::protein complex confident hh_1ds9_A_1::13-152 very confident psy3049 157 Q8VEG6::CCR4-NOT transcription complex subunit 6-like ::Plays a role in the deadenylation of mRNAs in the cytoplasm. Has 3'-5' poly(A) exoribonuclease activity for synthetic poly(A) RNA substrate. May be involved in the deadenylation-dependent degradation of mRNAs through the 3'-UTR AU-rich element-mediated mechanism. Involved in deadenylation-dependent degradation of CDKN1B mRNA.::Mus musculus (taxid: 10090) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.99::2-140 PF14580::LRR_9 99.44::4-134 GO:0043234::protein complex confident hh_2o6q_A_1::1-140 very confident psy3966 392 Q96CX6::Leucine-rich repeat-containing protein 58 ::::Homo sapiens (taxid: 9606) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.51::83-284 PF14580::LRR_9 99.38::126-233 GO:0043234::protein complex confident hh_2r9u_A_1::128-146,149-236 very confident psy9862 378 Q15404::Ras suppressor protein 1 ::Potentially plays a role in the Ras signal transduction pathway. Capable of suppressing v-Ras transformation in vitro.::Homo sapiens (taxid: 9606) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.27::125-362 PF14580::LRR_9 99.15::45-200 GO:0043508::negative regulation of JUN kinase activity confident hh_2ft3_A_1::102-135,137-166,169-214,227-246,249-267,270-354 very confident psy4162 210 B6CZ40::Leucine-rich repeat-containing protein 51 ::::Pan troglodytes (taxid: 9598) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.42::50-171 PF14580::LRR_9 99.78::14-182 GO:0044424::intracellular part confident hh_1ds9_A_1::55-70,79-101,103-123,127-150,153-172 very confident psy3329 694 P35858::Insulin-like growth factor-binding protein complex acid labile subunit ::Involved in protein-protein interactions that result in protein complexes, receptor-ligand binding or cell adhesion.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.00::418-512 PF14580::LRR_9 99.25::24-152 GO:0044425::membrane part confident hh_2z81_A_1::17-128,131-181,184-355,359-379,410-412,416-436,442-459,464-484,487-487,491-545 very confident psy14766 207 Q9HCJ2::Leucine-rich repeat-containing protein 4C ::May promote neurite outgrowth of developing thalamic neurons.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.95::35-192 PF14580::LRR_9 99.47::41-188 GO:0044425::membrane part confident hh_2r9u_A_1::20-30,35-75,78-143 very confident psy8029 693 P35858::Insulin-like growth factor-binding protein complex acid labile subunit ::Involved in protein-protein interactions that result in protein complexes, receptor-ligand binding or cell adhesion.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.03::297-483 PF14580::LRR_9 99.31::123-254 GO:0044446::intracellular organelle part confident hh_3t6q_A_1::26-33,38-66,70-85,88-111,113-257,260-266,268-409,411-469,471-490,505-536,543-564 very confident psy8551 581 G5EFX6::Slit homolog 1 protein ::Functions as a ligand for sax-3 receptor during larval development. Acts via the sax-3/Robo receptor to direct ventral axon guidance and guidance at the midline during embryonic development.::Caenorhabditis elegans (taxid: 6239) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.91::50-268 PF14580::LRR_9 99.17::35-176 GO:0044464::cell part confident hh_2id5_A_1::11-21,23-29,32-103,127-162,187-266,292-300,325-330,404-448,474-488,490-578 very confident psy6452 594 O88520::Leucine-rich repeat protein SHOC-2 ::Regulatory subunit of protein phosphatase 1 (PP1c) that acts as a M-Ras/MRAS effector and participates in MAPK pathway activation. Upon M-Ras/MRAS activation, targets PP1c to specifically dephosphorylate the 'Ser-259' inhibitory site of RAF1 kinase and stimulate RAF1 activity at specialized signaling complexes.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.29::261-392 PF14580::LRR_9 99.34::240-374 GO:0044464::cell part confident hh_2z81_A_1::226-274,276-276,278-401,403-418,420-428,435-475,487-519,522-538,542-562,564-591 very confident psy1672 600 P0C192::Leucine-rich repeat-containing protein 4B ::Synaptic adhesion protein. Regulates the formation of excitatory synapses. The trans-synaptic adhesion between LRRC4B and PTPRF regulates the formation of excitatory synapses in a bidirectional manner.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.81::51-206 PF14580::LRR_9 99.23::74-184 GO:0044464::cell part confident hh_2xot_A_1::13-25,30-49,51-70,72-241,244-244,247-255,259-280,282-299,302-309,311-313,320-354 very confident psy10289 497 P35858::Insulin-like growth factor-binding protein complex acid labile subunit ::Involved in protein-protein interactions that result in protein complexes, receptor-ligand binding or cell adhesion.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.03::145-352 PF14580::LRR_9 99.28::112-244 GO:0044464::cell part confident hh_3o6n_A_1::115-253,257-276,282-302,306-324,327-358,360-371,374-402,404-423,427-447 very confident psy16110 719 P35858::Insulin-like growth factor-binding protein complex acid labile subunit ::Involved in protein-protein interactions that result in protein complexes, receptor-ligand binding or cell adhesion.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.10::451-663 PF14580::LRR_9 99.27::216-350 GO:0044464::cell part confident hh_4eco_A_1::165-183,186-212,214-214,217-221,223-259,261-332,334-358,371-439,441-457,459-535,537-564,571-616,618-618,621-636 very confident psy11648 584 P35859::Insulin-like growth factor-binding protein complex acid labile subunit ::May have an important role in regulating the access of circulating IGFs to the tissues.::Rattus norvegicus (taxid: 10116) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.79::343-552 PF14580::LRR_9 99.16::22-154 GO:0044464::cell part confident hh_1ziw_A_1::1-17,22-67,69-72,74-97,100-161,163-227,230-251,253-259,262-311,314-409,413-462,464-572 very confident psy12291 404 Q80X72::Leucine-rich repeat-containing protein 15 ::::Mus musculus (taxid: 10090) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.15::73-280 PF14580::LRR_9 99.39::234-348 GO:0044699::single-organism process confident hh_2z81_A_1::27-40,43-254,256-303,306-364,366-375,380-386 very confident psy3330 608 Q3URE9::Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 ::::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.10::78-290 PF14580::LRR_9 99.30::52-177 GO:0044763::single-organism cellular process confident hh_2z81_A_1::21-28,36-162,164-306,308-332,334-359,363-372,374-380,385-399,401-407,410-463 very confident psy3781 183 Q5ZLN0::Leucine-rich repeat-containing protein 40 ::::Gallus gallus (taxid: 9031) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.44::6-168 PF14580::LRR_9 99.63::14-153 GO:0044763::single-organism cellular process confident hh_1dce_A_1::3-69,71-112,115-115,117-163 very confident psy12210 405 Q80TR4::Slit homolog 1 protein ::Thought to act as molecular guidance cue in cellular migration, and function appears to be mediated by interaction with roundabout homolog receptors. During neural development involved in axonal navigation at the ventral midline of the neural tube and projection of axons to different regions (By similarity). SLIT1 and SLIT2 together seem to be essential for midline guidance in the forebrain by acting as repulsive signal preventing inappropriate midline crossing by axons projecting from the olfactory bulb.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.96::107-394 PF14580::LRR_9 99.12::124-212 GO:0048523::negative regulation of cellular process confident hh_2v9t_B_2::95-209 very confident psy8880 141 Q6UXK2::Immunoglobulin superfamily containing leucine-rich repeat protein 2 ::Required for axon extension during neural development.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.93::6-141 PF14580::LRR_9 99.55::7-138 GO:0048699::generation of neurons confident hh_2r9u_A_1::13-29,31-31,34-122 very confident psy17253 227 Q7L1W4::Leucine-rich repeat-containing protein 8D ::::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.05::44-224 PF14580::LRR_9 99.28::44-191 GO:0048699::generation of neurons confident hh_3rfs_A_1::44-59,62-67,69-88,108-158,162-222 very confident psy10547 269 Q99PI8::Reticulon-4 receptor ::Receptor for RTN4, OMG and MAG. Mediates axonal growth inhibition and may play a role in regulating axonal regeneration and plasticity in the adult central nervous system (By similarity). Acts in conjunction with RTN4 and LIGO1 in regulating neuronal precursor cell motility during cortical development.::Mus musculus (taxid: 10090) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.28::76-267 PF14580::LRR_9 99.31::101-238 GO:0048699::generation of neurons confident hh_3rfs_A_1::74-92,94-123,137-160,162-268 very confident psy8031 127 Q6EMK4::Vasorin ::May act as an inhibitor of TGF-beta signaling.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 98.44::8-54 PF14580::LRR_9 99.51::8-126 GO:0050896::response to stimulus confident hh_3m19_A_1::2-24,27-69,71-126 very confident psy10546 298 Q9BXB1::Leucine-rich repeat-containing G-protein coupled receptor 4 ::Orphan receptor.::Homo sapiens (taxid: 9606) portable COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 99.32::81-289 PF14580::LRR_9 99.44::197-260 GO:0050896::response to stimulus confident hh_3zyi_A_1::36-46,50-56,58-69,76-123,125-212,214-236,240-270,272-298 very confident psy5414 62 B3DH20::Protein TILB homolog ::Plays a crucial role in regulating cilia motility in pronephric tubules, cloaca and neural tube. Required for establishing left-right asymmetry of the body plan; controls cell fate and convergent extension (CE) movements during gastrulation, respectively, via the Wnt and the planar cell polarity (PCP) signaling pathways. Required for the proper development of renal glomeruli and tubules.::Danio rerio (taxid: 7955) confident COG4886::Leucine-rich repeat (LRR) protein [Function unknown] 91.22::22-60 PF14580::LRR_9 98.99::1-61 GO:0060287::epithelial cilium movement involved in determination of left/right asymmetry confident hh_1ds9_A_2::21-40,42-58 confident psy3498 81 Q8MQI6::Transcription elongation factor 1 homolog ::Transcription elongation factor implicated in the maintenance of proper chromatin structure in actively transcribed regions.::Drosophila melanogaster (taxid: 7227) very confident COG4888::Uncharacterized Zn ribbon-containing protein [General function prediction only] 100.00::1-80 PF05129::Elf1 100.00::2-81 GO:0005730::nucleolus very confident hh_1wii_A_1::2-81 very confident psy15661 217 Q5SSH8::Neuferricin ::Heme-binding protein which promotes neuronal but not astrocyte differentiation.::Mus musculus (taxid: 10090) confident COG4892::Predicted heme/steroid binding protein [General function prediction only] 99.40::1-96 PF00173::Cyt-b5 99.57::1-94 GO:0005576::extracellular region confident hh_1j03_A_1::1-95 very confident psy11930 274 Q9JJ00::Phospholipid scramblase 1 ::May play a role in the antiviral response of interferon (IFN) by amplifying and enhancing the IFN response through increased expression of select subset of potent antiviral genes. May contribute to cytokine-regulated cell proliferation and differentiation.::Mus musculus (taxid: 10090) confident COG4894::Uncharacterized conserved protein [Function unknown] 99.88::60-260 PF03803::Scramblase 100.00::39-262 GO:0005829::cytosol confident hh_1zxu_A_1::52-71,79-100,103-103,111-135,143-165,167-189,197-219,222-242,246-264 confident psy1871 139 P48588::40S ribosomal protein S25 ::::Drosophila melanogaster (taxid: 7227) very confident COG4901::Ribosomal protein S25 [Translation, ribosomal structure and biogenesis] 100.00::20-133 PF03297::Ribosomal_S25 100.00::20-132 GO:0022627::cytosolic small ribosomal subunit confident hh_3iz6_V_1::20-29,37-133 very confident psy15976 319 P23188::Furin ::Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.::Mus musculus (taxid: 10090) confident COG4935::Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones] 99.74::213-317 PF01483::P_proprotein 99.85::239-317 GO:0005615::extracellular space confident hh_1p8j_A_1::1-209,213-218,221-317 very confident psy13851 331 Q03333::Neuroendocrine convertase 2 ::Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues.::Sus scrofa (taxid: 9823) confident COG4935::Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones] 99.83::185-316 PF01483::P_proprotein 99.90::217-309 GO:0031090::organelle membrane confident hh_1p8j_A_1::1-34,36-95,133-134,139-192,195-256,258-293,299-314 very confident psy14534 423 P21520::Protein scabrous ::Involved in regulation of neurogenesis. May encode a lateral inhibitor of R8 differentiation. In conjunction with Gp150, promotes Notch activation in response to Delta by regulating acquisition of insensitivity to Delta in a subset of cells.::Drosophila melanogaster (taxid: 7227) portable COG4942::Membrane-bound metallopeptidase [Cell division and chromosome partitioning] 96.13::18-77 PF00147::Fibrinogen_C 100.00::232-420 GO:0048014::Tie signaling pathway confident hh_2d39_A_1::231-403,405-421 very confident psy7061 65 O74184::WD repeat-containing protein wat1 ::May play a role in mRNA maturation as a coupling protein between splicing and synthesis and/or stabilization.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG4946::Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] 98.56::4-64 PF08662::eIF2A 99.31::6-65 GO:0005829::cytosol confident no hit no match psy14484 430 P44426::Adenosylmethionine-8-amino-7-oxononanoate aminotransferase ::Catalyzes the transfer of the alpha-amino group from S-adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor.::Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) confident COG4992::ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] 100.00::6-429 PF00202::Aminotran_3 100.00::16-369 GO:0005829::cytosol confident hh_3ruy_A_1::7-23,27-71,73-90,93-169,187-196,200-209,211-295,302-348,350-369,371-371,376-376,380-425 very confident psy6548 242 Q18040::Probable ornithine aminotransferase, mitochondrial ::::Caenorhabditis elegans (taxid: 6239) confident COG4992::ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] 100.00::3-240 PF00202::Aminotran_3 99.97::18-183 GO:0005829::cytosol confident hh_3ruy_A_1::4-158,160-183,187-234 very confident psy4800 119 Q55FI1::4-aminobutyrate aminotransferase ::::Dictyostelium discoideum (taxid: 44689) confident COG4992::ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] 100.00::1-118 PF00202::Aminotran_3 99.97::1-116 GO:0005829::cytosol confident hh_1ohv_A_1::1-46,48-115 very confident psy6547 266 Q6LFH8::Ornithine aminotransferase ::The enzyme has a very narrow substrate specificity and can only catalyze the transamination of alpha-ketoglutarate with ornithine or N-acetylornithine and of glutamate-5-semialdehyde with glutamate and alanine.::Plasmodium falciparum (isolate 3D7) (taxid: 36329) confident COG4992::ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] 100.00::1-264 PF00202::Aminotran_3 99.98::2-205 GO:0005829::cytosol confident hh_3ruy_A_1::3-36,39-179,181-188,190-195,199-206,211-258 very confident psy6206 83 Q9VU95::Alanine--glyoxylate aminotransferase 2-like ::::Drosophila melanogaster (taxid: 7227) confident COG4992::ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism] 99.96::1-83 PF00202::Aminotran_3 99.89::1-83 GO:0009436::glyoxylate catabolic process confident hh_1z7d_A_1::2-46,49-82 very confident psy8912 538 Q9D967::Magnesium-dependent phosphatase 1 ::Magnesium-dependent phosphatase which may act as a tyrosine phosphatase.::Mus musculus (taxid: 10090) confident COG4996::Predicted phosphatase [General function prediction only] 99.82::385-529 PF12689::Acid_PPase 99.97::382-537 GO:0016791::phosphatase activity confident hh_2wm8_A_2::384-405,410-537 very confident psy14548 482 P91622::[Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial ::Inhibits the mitochondrial pyruvate dehydrogenase complex by phosphorylation of the E1 alpha subunit, thus contributing to the regulation of glucose metabolism.::Drosophila melanogaster (taxid: 7227) very confident COG5002::VicK Signal transduction histidine kinase [Signal transduction mechanisms] 100.00::102-362 PF10436::BCDHK_Adom3 100.00::24-189 GO:2000811::negative regulation of anoikis very confident hh_2btz_A_1::10-108,110-174,177-313,315-396 very confident psy1645 143 P29742::Clathrin heavy chain ::Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.::Drosophila melanogaster (taxid: 7227) confident COG5010::TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] 94.20::4-135 PF00637::Clathrin 97.69::73-142 GO:0048471::perinuclear region of cytoplasm confident hh_1b89_A_1::21-27,30-142 very confident psy11525 244 Q8K057::Intraflagellar transport protein 80 homolog ::Component of the intraflagellar transport (IFT) complex B, which is essential for the development and maintenance of motile and sensory cilia.::Mus musculus (taxid: 10090) portable COG5010::TadD Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking and secretion] 95.68::88-202 PF04053::Coatomer_WDAD 99.65::2-203 GO:0005929::cilium confident hh_3mkq_A_1::89-222 confident psy97 339 P28661::Septin-4 ::Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). May play a role in platelet secretion.::Mus musculus (taxid: 10090) confident COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 100.00::131-303 PF00735::Septin 100.00::9-303 GO:0005730::nucleolus confident hh_2qnr_A_1::129-134,136-273,275-303 very confident psy5592 257 Q16181::Septin-7 ::Filament-forming cytoskeletal GTPase. Required for normal organization of the actin cytoskeleton. Required for normal progress through mitosis. Involved in cytokinesis. Required for normal association of CENPE with the kinetochore. Plays a role in ciliogenesis and collective cell movements.::Homo sapiens (taxid: 9606) confident COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 100.00::1-225 PF00735::Septin 100.00::1-143 GO:0005730::nucleolus confident hh_3t5d_A_1::2-49,52-139 very confident psy5599 79 Q16181::Septin-7 ::Filament-forming cytoskeletal GTPase. Required for normal organization of the actin cytoskeleton. Required for normal progress through mitosis. Involved in cytokinesis. Required for normal association of CENPE with the kinetochore. Plays a role in ciliogenesis and collective cell movements.::Homo sapiens (taxid: 9606) confident COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 99.14::12-61 PF00735::Septin 98.66::14-62 GO:0005730::nucleolus very confident hh_3t5d_A_1::14-59 very confident psy91 541 P28661::Septin-4 ::Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). May play a role in platelet secretion.::Mus musculus (taxid: 10090) portable COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 100.00::241-538 PF00735::Septin 100.00::259-494 GO:0015629::actin cytoskeleton confident hh_3t5d_A_1::257-292,294-489 very confident psy14699 195 P42207::Septin-1 ::Involved in cytokinesis.::Drosophila melanogaster (taxid: 7227) confident COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 100.00::1-189 PF00735::Septin 100.00::1-142 GO:0031105::septin complex confident hh_2qnr_A_1::2-143 very confident psy8479 650 P54359::Septin-2 ::Involved in cytokinesis.::Drosophila melanogaster (taxid: 7227) portable COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 100.00::86-447 PF00735::Septin 100.00::106-446 GO:0031105::septin complex confident no hit no match psy104 86 P28661::Septin-4 ::Filament-forming cytoskeletal GTPase (By similarity). May play a role in cytokinesis (Potential). May play a role in platelet secretion.::Mus musculus (taxid: 10090) confident COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 99.96::9-85 PF00735::Septin 99.94::6-85 GO:0048471::perinuclear region of cytoplasm confident bp_2qag_A_1::11-79 very confident psy8482 122 P54359::Septin-2 ::Involved in cytokinesis.::Drosophila melanogaster (taxid: 7227) confident COG5019::CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton] 99.48::1-94 no hit no match GO:0031105::septin complex confident hh_2qag_B_1::1-122 very confident psy14614 92 Q6I6G8::E3 ubiquitin-protein ligase HECW2 ::E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.::Mus musculus (taxid: 10090) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.94::1-90 PF00632::HECT 99.77::2-90 GO:0000785::chromatin confident rp_1zvd_A_1::18-45,47-83 very confident psy9517 95 F1LP64::E3 ubiquitin-protein ligase TRIP12 ::E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardeless of the presence of lysine residues in target proteins. In normal cells, mediates ubiquitination and degradation of isoform p19ARF/ARF of CDKN2A, a lysine-less tumor suppressor required for p53/TP53 activation under oncogenic stress. In cancer cells, however, isoform p19ARF/ARF and TRIP12 are located in different cell compartments, preventing isoform p19ARF/ARF ubiquitination and degradation. Does not mediate ubiquitination of isoform p16-INK4a of CDKN2A. Also catalyzes ubiquitination of NAE1 and SMARCE1, leading to their degradation. Ubiquitination and degradation of target proteins is regulated by interaction with proteins such as MYC, TRADD or SMARCC1, which disrupt the interaction between TRIP12 and target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spreading of ubiquitinated chromatin at damaged chromosomes.::Rattus norvegicus (taxid: 10116) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.96::1-95 PF00632::HECT 99.96::1-95 GO:0005654::nucleoplasm confident hh_3h1d_A_1::1-17,21-22,24-43,49-95 very confident psy4370 191 F1LP64::E3 ubiquitin-protein ligase TRIP12 ::E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardeless of the presence of lysine residues in target proteins. In normal cells, mediates ubiquitination and degradation of isoform p19ARF/ARF of CDKN2A, a lysine-less tumor suppressor required for p53/TP53 activation under oncogenic stress. In cancer cells, however, isoform p19ARF/ARF and TRIP12 are located in different cell compartments, preventing isoform p19ARF/ARF ubiquitination and degradation. Does not mediate ubiquitination of isoform p16-INK4a of CDKN2A. Also catalyzes ubiquitination of NAE1 and SMARCE1, leading to their degradation. Ubiquitination and degradation of target proteins is regulated by interaction with proteins such as MYC, TRADD or SMARCC1, which disrupt the interaction between TRIP12 and target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spreading of ubiquitinated chromatin at damaged chromosomes.::Rattus norvegicus (taxid: 10116) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.95::25-186 PF00632::HECT 99.90::24-186 GO:0005654::nucleoplasm confident hh_1c4z_A_1::23-34,47-96,107-186 very confident psy14617 102 Q6I6G8::E3 ubiquitin-protein ligase HECW2 ::E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.::Mus musculus (taxid: 10090) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.90::7-102 PF00632::HECT 94.22::64-93 GO:0005730::nucleolus confident hh_1zvd_A_1::8-40,42-101 very confident psy16438 458 O95714::E3 ubiquitin-protein ligase HERC2 ::E3 ubiquitin-protein ligase that regulates ubiquitin-dependent retention of repair proteins on damaged chromosomes. Recruited to sites of DNA damage in response to ionizing radiation (IR) and facilitates the assembly of UBE2N and RNF8 promoting DNA damage-induced formation of 'Lys-63'-linked ubiquitin chains. Acts as a mediator of binding specificity between UBE2N and RNF8. Involved in the maintenance of RNF168 levels. E3 ubiquitin-protein ligase that promotes the ubiquitination and proteasomal degradation of XPA which influences the circadian oscillation of DNA excision repair activity.::Homo sapiens (taxid: 9606) portable COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-432 PF00632::HECT 100.00::15-432 GO:0005737::cytoplasm confident hh_1zvd_A_1::1-22,24-37,45-53,55-123,126-129,238-332,334-371,374-385,389-433 very confident psy14612 140 Q6I6G8::E3 ubiquitin-protein ligase HECW2 ::E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.::Mus musculus (taxid: 10090) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-140 PF00632::HECT 99.68::34-140 GO:0005794::Golgi apparatus confident hh_1zvd_A_1::1-8,10-99,101-140 very confident psy15273 324 Q15751::Probable E3 ubiquitin-protein ligase HERC1 ::Involved in membrane trafficking via some guanine nucleotide exchange factor (GEF) activity and its ability to bind clathrin. Acts as a GEF for Arf and Rab, by exchanging bound GDP for free GTP. Binds phosphatidylinositol 4,5-bisphosphate, which is required for GEF activity. May also act as a E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.::Homo sapiens (taxid: 9606) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::145-305 PF00632::HECT 100.00::143-306 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_1zvd_A_1::139-306 very confident psy16327 994 Q9Y0H4::E3 ubiquitin-protein ligase Su(dx) ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Down-regulates Notch/N signaling pathway, probably by promoting Notch ubiquitination, endocytosis and degradation. Involved in wing growth and leg joint formation.::Drosophila melanogaster (taxid: 7227) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::508-994 PF00632::HECT 100.00::764-993 GO:0019915::lipid storage confident hh_1nd7_A_1::691-938,941-989 very confident psy7264 206 no hit no match COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::2-206 PF00632::HECT 100.00::2-206 GO:0031323::regulation of cellular metabolic process confident hh_1zvd_A_1::2-16,27-160,188-198,200-205 very confident psy8383 421 A9JRZ0::E3 ubiquitin-protein ligase SMURF2 ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.::Danio rerio (taxid: 7955) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::7-387 PF00632::HECT 100.00::85-387 GO:0031398::positive regulation of protein ubiquitination confident hh_1zvd_A_1::35-149,160-194,196-386 very confident psy14176 262 Q9V853::E3 ubiquitin-protein ligase Smurf1 ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Down-regulates Dpp signaling after gastrulation by promoting MAD ubiquitination and subsequent degradation.::Drosophila melanogaster (taxid: 7227) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::10-262 PF00632::HECT 100.00::38-261 GO:0031398::positive regulation of protein ubiquitination confident hh_1zvd_A_1::6-55,61-91,94-94,97-102,104-115,117-202,217-262 very confident psy4372 50 F1RCR6::E3 ubiquitin-protein ligase TRIP12 ::E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardeless of the presence of lysine residues in target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spreading of ubiquitinated chromatin at damaged chromosomes.::Danio rerio (taxid: 7955) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.43::1-50 PF00632::HECT 99.26::1-50 GO:0042752::regulation of circadian rhythm confident hh_1zvd_A_1::1-33,39-50 very confident psy17934 584 Q05086::Ubiquitin-protein ligase E3A ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. Several substrates have been identified including the RAD23A and RAD23B, MCM7 (which is involved in DNA replication), annexin A1, the PML tumor suppressor, and the cell cycle regulator CDKN1B. Additionally, may function as a cellular quality control ubiquitin ligase by helping the degradation of the cytoplasmic misfolded proteins. Finally, UBE3A also promotes its own degradation in vivo.::Homo sapiens (taxid: 9606) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::295-584 PF00632::HECT 100.00::396-584 GO:0070936::protein K48-linked ubiquitination confident hh_1c4z_A_1::339-490,492-584 very confident psy12140 173 O95071::E3 ubiquitin-protein ligase UBR5 ::E3 ubiquitin-protein ligase which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation (By similarity). Involved in maturation and/or transcriptional regulation of mRNA by activating CDK9 by polyubiquitination. May play a role in control of cell cycle progression. May have tumor suppressor function. Regulates DNA topoisomerase II binding protein (TopBP1) in the DNA damage response. Plays an essential role in extraembryonic development.::Homo sapiens (taxid: 9606) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.95::7-147 PF00632::HECT 99.91::8-146 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_3pt3_A_1::46-97,102-115,120-125,128-163 very confident psy12632 395 O95071::E3 ubiquitin-protein ligase UBR5 ::E3 ubiquitin-protein ligase which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation (By similarity). Involved in maturation and/or transcriptional regulation of mRNA by activating CDK9 by polyubiquitination. May play a role in control of cell cycle progression. May have tumor suppressor function. Regulates DNA topoisomerase II binding protein (TopBP1) in the DNA damage response. Plays an essential role in extraembryonic development.::Homo sapiens (taxid: 9606) portable COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::8-395 PF00632::HECT 100.00::15-394 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_3pt3_A_1::279-395 very confident psy14609 171 Q6I6G8::E3 ubiquitin-protein ligase HECW2 ::E3 ubiquitin-protein ligase that mediates ubiquitination of TP73. Acts to stabilize TP73 and enhance activation of transcription by TP73.::Mus musculus (taxid: 10090) confident COG5021::HUL4 Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-171 PF00632::HECT 100.00::1-170 GO:1901016::regulation of potassium ion transmembrane transporter activity confident hh_1zvd_A_1::2-67,69-171 very confident psy18111 186 P46735::Unconventional myosin-Ib ::Motor protein that may participate in process critical to neuronal development and function such as cell migration, neurite outgrowth and vesicular transport.::Mus musculus (taxid: 10090) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::9-186 PF00063::Myosin_head 100.00::13-186 GO:0000146::microfilament motor activity confident hh_2ycu_A_1::11-122,124-186 very confident psy15463 68 Q7Z406::Myosin-14 ::Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.::Homo sapiens (taxid: 9606) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.91::1-66 PF00063::Myosin_head 99.90::1-66 GO:0001725::stress fiber very confident hh_2ycu_A_1::1-66 very confident psy12860 198 P34710::Netrin unc-6 ::Component of an extracellular matrix cue that guides dorsoventral migrations on the epidermis. Required for the guidance of pioneer axons and migrating cells along the body wall. Its association with either unc-40 or unc-5 receptors will lead to axon attraction or repulsion, respectively.::Caenorhabditis elegans (taxid: 6239) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::31-194 PF00063::Myosin_head 99.92::31-195 GO:0005578::proteinaceous extracellular matrix confident hh_1uap_A_1::93-123,125-164,168-197 confident psy2118 357 Q9XVJ2::Probable glucosamine-6-phosphate isomerase ::::Caenorhabditis elegans (taxid: 6239) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::42-244 PF00063::Myosin_head 99.90::42-249 GO:0005737::cytoplasm confident hh_3hn6_A_1::1-176 very confident psy15660 178 P08799::Myosin-2 heavy chain ::Myosin is a protein that binds to actin and has ATPase activity that is activated by actin.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-178 PF00063::Myosin_head 100.00::1-178 GO:0005794::Golgi apparatus confident hh_1w9i_A_1::1-67,108-178 very confident psy3268 194 B2RTY4::Unconventional myosin-IXa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho activity in neurons, has a role in the regulation of neuronal morphology and function.::Homo sapiens (taxid: 9606) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::3-171 PF00063::Myosin_head 100.00::2-173 GO:0005829::cytosol confident hh_2ycu_A_1::3-12,14-88,91-116,118-125,133-154,158-171 very confident psy12964 156 O94477::Myosin-52 ::Involved in cell wall deposition where it has a role in the localization of mok1.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::11-144 PF00063::Myosin_head 99.96::10-152 GO:0005829::cytosol confident hh_4db1_A_1::11-41,43-154 very confident psy6822 107 P91443::Unconventional myosin heavy chain 6 ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.::Caenorhabditis elegans (taxid: 6239) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.77::1-63 PF00063::Myosin_head 99.63::1-62 GO:0005829::cytosol confident hh_2ycu_A_1::1-62 very confident psy17057 80 Q63358::Unconventional myosin-IXb ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho.::Rattus norvegicus (taxid: 10116) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.92::1-80 PF00063::Myosin_head 99.89::1-80 GO:0005829::cytosol confident hh_2ycu_A_1::1-80 very confident psy10145 110 Q6BUQ2::Myosin-1 ::Type-I myosin implicated in the organization of the actin cytoskeleton. Required for proper actin cytoskeleton polarization. At the cell cortex, assembles in patch-like structures together with proteins from the actin-polymerizing machinery and promotes actin assembly. Functions as actin nucleation-promoting factor (NPF) for the Arp2/3 complex.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-109 PF00063::Myosin_head 100.00::1-107 GO:0005829::cytosol confident hh_2ycu_A_1::1-109 very confident psy17856 79 Q7Z406::Myosin-14 ::Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.::Homo sapiens (taxid: 9606) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.76::3-69 PF00063::Myosin_head 99.72::4-69 GO:0005829::cytosol very confident hh_2ycu_A_1::3-17,21-71 very confident psy10328 560 Q9QYF3::Unconventional myosin-Va ::Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.::Rattus norvegicus (taxid: 10116) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::16-555 PF00063::Myosin_head 100.00::16-370 GO:0005829::cytosol confident hh_4db1_A_1::16-24,26-134,136-201,206-266,295-334,336-386 very confident psy163 97 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::4-95 PF00063::Myosin_head 100.00::4-94 GO:0005829::cytosol confident hh_2ycu_A_1::4-95 very confident psy6689 89 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-89 PF00063::Myosin_head 100.00::2-89 GO:0005829::cytosol confident hh_2ycu_A_1::2-89 very confident psy12971 82 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::2-80 PF00063::Myosin_head 99.94::2-81 GO:0005829::cytosol confident hh_2ycu_A_1::2-75,77-81 very confident psy7811 94 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.95::4-94 PF00063::Myosin_head 99.92::3-94 GO:0005829::cytosol confident hh_1i84_S_1::21-94 very confident psy7599 161 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::9-113 PF00063::Myosin_head 99.97::10-112 GO:0005829::cytosol confident no hit no match psy16826 68 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::1-68 PF00063::Myosin_head 99.93::1-68 GO:0005829::cytosol confident hh_2ycu_A_1::1-68 very confident psy15837 82 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::1-79 PF00063::Myosin_head 99.94::1-79 GO:0005829::cytosol confident hh_2ycu_A_1::1-79 very confident psy6805 86 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.97::4-84 PF00063::Myosin_head 99.95::4-84 GO:0005829::cytosol confident hh_2ycu_A_1::4-84 very confident psy9379 161 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-137 PF00063::Myosin_head 100.00::1-104 GO:0005829::cytosol confident hh_2ycu_A_1::1-11,13-131 very confident psy1827 148 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::23-147 PF00063::Myosin_head 99.97::23-147 GO:0005829::cytosol confident hh_2ycu_A_1::23-59,64-68,70-147 very confident psy1325 83 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::3-79 PF00063::Myosin_head 99.94::3-78 GO:0005829::cytosol confident hh_2ycu_A_1::3-78 very confident psy974 68 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.95::1-68 PF00063::Myosin_head 99.93::1-68 GO:0005829::cytosol confident hh_2ycu_A_1::1-68 very confident psy11322 74 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.97::1-73 PF00063::Myosin_head 99.95::1-73 GO:0005829::cytosol confident hh_2ycu_A_1::1-73 very confident psy5254 147 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::5-146 PF00063::Myosin_head 100.00::5-146 GO:0005829::cytosol confident hh_2ycu_A_1::5-61,63-146 very confident psy15143 149 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::58-148 PF00063::Myosin_head 99.97::57-148 GO:0005829::cytosol confident hh_4db1_A_1::57-74,76-131,133-148 very confident psy13806 97 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::9-95 PF00063::Myosin_head 99.95::8-95 GO:0005829::cytosol confident hh_2ycu_A_1::9-95 very confident psy18190 108 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::4-95 PF00063::Myosin_head 99.97::4-102 GO:0005829::cytosol confident hh_1w9i_A_1::5-96 very confident psy16447 107 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.92::35-107 PF00063::Myosin_head 99.88::36-107 GO:0005829::cytosol confident hh_2ycu_A_1::36-107 very confident psy12116 114 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.98::8-102 PF00063::Myosin_head 99.97::8-101 GO:0005829::cytosol confident hh_2ycu_A_1::8-103 very confident psy6719 126 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::15-123 PF00063::Myosin_head 99.97::15-115 GO:0005829::cytosol confident hh_2ycu_A_1::15-112 very confident psy5928 76 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::2-74 PF00063::Myosin_head 99.94::1-75 GO:0005829::cytosol confident hh_2ycu_A_1::2-75 very confident psy11252 146 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-144 PF00063::Myosin_head 99.98::2-145 GO:0005829::cytosol confident hh_2ycu_A_1::2-30,52-124,136-144 very confident psy324 101 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::3-100 PF00063::Myosin_head 99.98::8-100 GO:0005829::cytosol confident hh_2ycu_A_1::9-25,27-100 very confident psy15574 105 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::9-102 PF00063::Myosin_head 99.97::9-101 GO:0005829::cytosol confident hh_1w9i_A_1::9-17,19-101 very confident psy6188 74 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::3-74 PF00063::Myosin_head 99.94::3-74 GO:0005829::cytosol confident hh_2ycu_A_1::3-74 very confident psy15260 128 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-120 PF00063::Myosin_head 100.00::1-121 GO:0005829::cytosol confident hh_2ycu_A_1::1-120 very confident psy10931 139 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.92::2-84 PF00063::Myosin_head 99.88::2-91 GO:0005829::cytosol confident hh_2ycu_A_1::2-93 very confident psy9090 488 Q86IX1::Serine/threonine-protein kinase dst1 ::::Dictyostelium discoideum (taxid: 44689) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::190-485 PF00063::Myosin_head 100.00::193-485 GO:0005856::cytoskeleton confident hh_2i0e_A_1::1-78,84-127,131-186 very confident psy2473 213 Q99323::Myosin heavy chain, non-muscle ::Nonmuscle myosin appears to be responsible for cellularization. Required for morphogenesis and cytokinesis.::Drosophila melanogaster (taxid: 7227) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::4-213 PF00063::Myosin_head 100.00::4-212 GO:0005913::cell-cell adherens junction confident hh_2ycu_A_1::5-85,87-191,196-213 very confident psy17851 60 Q99323::Myosin heavy chain, non-muscle ::Nonmuscle myosin appears to be responsible for cellularization. Required for morphogenesis and cytokinesis.::Drosophila melanogaster (taxid: 7227) very confident COG5022::Myosin heavy chain [Cytoskeleton] 99.72::1-58 PF00063::Myosin_head 99.68::1-57 GO:0005913::cell-cell adherens junction confident hh_2ycu_A_1::1-57 very confident psy8604 70 F8VQB6::Unconventional myosin-X ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. MYO10 binds to actin filaments and actin bundles and functions as plus end-directed motor. The tail domain binds to membranous compartments containing phosphatidylinositol 3,4,5-trisphosphate or integrins, and mediates cargo transport along actin filaments (By similarity). Regulates cell shape, cell spreading and cell adhesion. Stimulates the formation and elongation of filopodia. May play a role in neurite outgrowth and axon guidance. Plays a role in formation of the podosome belt in osteoclasts.::Mus musculus (taxid: 10090) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.90::1-63 PF00063::Myosin_head 99.80::1-65 GO:0030898::actin-dependent ATPase activity confident hh_1w9i_A_1::1-63 very confident psy6137 93 P21271::Unconventional myosin-Vb ::May be involved in vesicular trafficking via its association with the CART complex. The CART complex is necessary for efficient transferrin receptor recycling but not for EGFR degradation (By similarity). Required in a complex with RAB11A and RAB11FIP2 for the transport of NPC1L1 to the plasma membrane (By similarity). Together with RAB11A participates in CFTR trafficking to the plasma membrane and TF (transferrin) recycling in nonpolarized cells (By similarity). Together with RAB11A and RAB8A participates in epithelial cell polarization (By similarity). Together with RAB25 regulates transcytosis.::Mus musculus (taxid: 10090) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.93::2-84 PF00063::Myosin_head 99.91::2-81 GO:0030898::actin-dependent ATPase activity confident hh_2dfs_A_1::2-68,71-76,78-83 very confident psy18112 107 P34092::Myosin IB heavy chain ::Myosin is a protein that binds to actin and has ATPase activity that is activated by actin. Myosin IB may have a role in chemotaxis and aggregation; it could serve to stabilize and even retract cortical structures, such as pseudopods and lamellopods. Involved in the whole cell motility of aggregation-stages cells. Overexpression results in significant decrease in the rate of cellular translocation and fluid-phase pinocytosis and abnormalities in the normal rearrangement of the actin cytoskeleton.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.97::1-105 PF00063::Myosin_head 99.96::1-106 GO:0030898::actin-dependent ATPase activity confident hh_1w9i_A_1::1-10,14-58,60-106 very confident psy17854 181 Q27991::Myosin-10 ::Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping. Involved with LARP6 in the stabilization of type I collagen mRNAs for CO1A1 and CO1A2.::Bos taurus (taxid: 9913) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::9-180 PF00063::Myosin_head 100.00::12-180 GO:0030898::actin-dependent ATPase activity very confident hh_2ycu_A_1::9-180 very confident psy17386 276 Q6PIF6::Unconventional myosin-VIIb ::Myosins are actin-based motor molecules with ATPase activity. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. May be have a role in the apical membranes of transporting epithelia.::Homo sapiens (taxid: 9606) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-271 PF00063::Myosin_head 100.00::1-268 GO:0030898::actin-dependent ATPase activity confident hh_2ycu_A_1::1-265 very confident psy17848 363 Q99323::Myosin heavy chain, non-muscle ::Nonmuscle myosin appears to be responsible for cellularization. Required for morphogenesis and cytokinesis.::Drosophila melanogaster (taxid: 7227) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-344 PF00063::Myosin_head 100.00::1-345 GO:0030898::actin-dependent ATPase activity confident hh_2ycu_A_1::1-79,87-226,282-344 very confident psy17056 251 Q01989::Myosin heavy chain 95F ::Myosin is a protein that binds to actin and has ATPase activity that is activated by actin. Together CLIP-190 and jar may coordinate the interaction between the actin and microtubule cytoskeleton. May link endocytic vesicles to microtubules and may be involved in transport in the early embryo and in the dynamic process of dorsal closure. It is believed that its function changes during the life cycle.::Drosophila melanogaster (taxid: 7227) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-251 PF00063::Myosin_head 100.00::2-250 GO:0031090::organelle membrane confident hh_2ycu_A_1::1-101,103-107,109-113,155-195,200-250 very confident psy18109 602 P46735::Unconventional myosin-Ib ::Motor protein that may participate in process critical to neuronal development and function such as cell migration, neurite outgrowth and vesicular transport.::Mus musculus (taxid: 10090) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-470 PF00063::Myosin_head 100.00::1-419 GO:0031941::filamentous actin confident hh_2ycu_A_1::1-16,18-31,45-48,50-94,98-133,136-137,143-206,212-304,322-398,400-482 very confident psy5329 163 Q13459::Unconventional myosin-IXb ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho.::Homo sapiens (taxid: 9606) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::6-107 PF00063::Myosin_head 99.95::4-111 GO:0031941::filamentous actin confident no hit no match psy2909 165 Q29P71::Myosin-VIIa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements: can function in cells as a single-molecule cargo transporter. A very slow and high-duty-ratio motor, may be suitable for tension maintenance of actin filaments. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Plays a key role in the formation of cellular projections and other actin-based functions required for embryonic and larval viability. Necessary for auditory transduction: plays a role in Johnston organ (JO) organization by functioning in scolopidial apical attachment and therefore to acoustic stimulus propagation from the antenna a2/a3 joint to transducing elements.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::7-142 PF00063::Myosin_head 99.97::7-142 GO:0031941::filamentous actin confident hh_2ycu_A_1::7-103,105-107,116-142 very confident psy11163 148 Q29P71::Myosin-VIIa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements: can function in cells as a single-molecule cargo transporter. A very slow and high-duty-ratio motor, may be suitable for tension maintenance of actin filaments. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Plays a key role in the formation of cellular projections and other actin-based functions required for embryonic and larval viability. Necessary for auditory transduction: plays a role in Johnston organ (JO) organization by functioning in scolopidial apical attachment and therefore to acoustic stimulus propagation from the antenna a2/a3 joint to transducing elements.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-144 PF00063::Myosin_head 100.00::2-141 GO:0031941::filamentous actin confident hh_2ycu_A_1::2-106,111-141 very confident psy724 92 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-92 PF00063::Myosin_head 99.98::2-91 GO:0031941::filamentous actin confident hh_2ycu_A_1::3-91 very confident psy14368 128 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::4-113 PF00063::Myosin_head 99.97::8-114 GO:0031941::filamentous actin confident hh_1g8x_A_1::9-20,22-26,28-114 very confident psy4822 124 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.96::1-103 PF00063::Myosin_head 99.95::1-101 GO:0031941::filamentous actin confident hh_2ycu_A_1::1-74,77-102 very confident psy3313 135 Q9V3Z6::Myosin-VIIa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements: can function in cells as a single-molecule cargo transporter. A very slow and high-duty-ratio motor, may be suitable for tension maintenance of actin filaments. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Plays a key role in the formation of cellular projections and other actin-based functions required for embryonic and larval viability. Necessary for auditory transduction: plays a role in Johnston organ (JO) organization by functioning in scolopidial apical attachment and therefore to acoustic stimulus propagation from the antenna a2/a3 joint to transducing elements.::Drosophila melanogaster (taxid: 7227) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.97::5-122 PF00063::Myosin_head 99.96::2-121 GO:0031941::filamentous actin confident hh_1lkx_A_1::2-20,29-120 very confident psy2669 166 P05661::Myosin heavy chain, muscle ::Muscle contraction.::Drosophila melanogaster (taxid: 7227) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::3-153 PF00063::Myosin_head 100.00::2-150 GO:0042803::protein homodimerization activity confident hh_4db1_A_1::1-149 very confident psy8603 184 B2RTY4::Unconventional myosin-IXa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho activity in neurons, has a role in the regulation of neuronal morphology and function.::Homo sapiens (taxid: 9606) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-184 PF00063::Myosin_head 100.00::1-183 GO:0042995::cell projection confident hh_1i84_S_1::1-77,82-95,107-110,117-128,133-183 very confident psy7658 114 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-114 PF00063::Myosin_head 100.00::1-114 GO:0043025::neuronal cell body confident hh_2ycu_A_1::1-114 very confident psy9984 144 Q9QYF3::Unconventional myosin-Va ::Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.::Rattus norvegicus (taxid: 10116) portable COG5022::Myosin heavy chain [Cytoskeleton] 99.92::3-144 PF00063::Myosin_head 99.80::3-144 GO:0043234::protein complex confident hh_1lkx_A_1::3-97,99-111,113-144 very confident psy6222 863 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::13-702 PF00063::Myosin_head 100.00::12-649 GO:0043234::protein complex confident hh_2ycu_A_1::12-64,66-112,115-131,133-173,181-262,265-265,273-273,311-368,370-469,472-486,488-491,493-496,501-507,509-604,606-621,634-688 very confident psy13375 204 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-195 PF00063::Myosin_head 100.00::2-196 GO:0044449::contractile fiber part confident hh_2ycu_A_1::2-165,168-182,186-200 very confident psy14295 750 Q9V3Z6::Myosin-VIIa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements: can function in cells as a single-molecule cargo transporter. A very slow and high-duty-ratio motor, may be suitable for tension maintenance of actin filaments. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Plays a key role in the formation of cellular projections and other actin-based functions required for embryonic and larval viability. Necessary for auditory transduction: plays a role in Johnston organ (JO) organization by functioning in scolopidial apical attachment and therefore to acoustic stimulus propagation from the antenna a2/a3 joint to transducing elements.::Drosophila melanogaster (taxid: 7227) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::1-726 PF00063::Myosin_head 100.00::1-604 GO:0044464::cell part confident hh_1g8x_A_1::1-62,67-75,79-87,95-103,110-331,334-353,470-565,567-584 very confident psy17060 234 Q13459::Unconventional myosin-IXb ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. May be involved in the remodeling of the actin cytoskeleton. Binds actin with high affinity both in the absence and presence of ATP and its mechanochemical activity is inhibited by calcium ions. Also acts as a GTPase activating protein on Rho.::Homo sapiens (taxid: 9606) portable COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-234 PF00063::Myosin_head 100.00::1-234 GO:0051015::actin filament binding confident hh_2ycu_A_1::1-76,82-116,118-162,168-170,172-234 very confident psy4957 143 B2RTY4::Unconventional myosin-IXa ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Regulates Rho activity in neurons, has a role in the regulation of neuronal morphology and function.::Homo sapiens (taxid: 9606) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.60::52-142 PF00063::Myosin_head 99.37::94-142 GO:0060002::plus-end directed microfilament motor activity confident hh_2ycu_A_1::53-60,63-142 very confident psy3667 266 Q9JLT0::Myosin-10 ::Involved with LARP6 in the stabilization of type I collagen mRNAs for CO1A1 and CO1A2 (By similarity). Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping.::Rattus norvegicus (taxid: 10116) confident COG5022::Myosin heavy chain [Cytoskeleton] 100.00::2-234 PF00063::Myosin_head 100.00::2-229 GO:0071944::cell periphery confident no hit no match psy10330 109 Q9QYF3::Unconventional myosin-Va ::Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.::Rattus norvegicus (taxid: 10116) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.54::6-108 PF00612::IQ 98.08::71-90 GO:0005509::calcium ion binding confident bp_2dfs_A_1::40-109 very confident psy4661 59 P79293::Myosin-7 ::Muscle contraction.::Sus scrofa (taxid: 9823) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.49::1-58 PF00612::IQ 98.28::29-48 GO:0006941::striated muscle contraction confident hh_1wdc_A_1::23-58 very confident psy16531 104 P05661::Myosin heavy chain, muscle ::Muscle contraction.::Drosophila melanogaster (taxid: 7227) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.51::14-97 PF00612::IQ 97.94::46-65 GO:0030898::actin-dependent ATPase activity confident hh_1i84_S_1::14-21,23-97 very confident psy6619 230 Q27991::Myosin-10 ::Cellular myosin that appears to play a role in cytokinesis, cell shape, and specialized functions such as secretion and capping. Involved with LARP6 in the stabilization of type I collagen mRNAs for CO1A1 and CO1A2.::Bos taurus (taxid: 9913) portable COG5022::Myosin heavy chain [Cytoskeleton] 99.93::2-165 PF00612::IQ 97.29::98-113 GO:0030898::actin-dependent ATPase activity confident hh_1i84_S_1::2-140 very confident psy2532 410 O35889::Afadin ::Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.::Rattus norvegicus (taxid: 10116) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.23::32-183 PF01843::DIL 99.97::64-169 GO:0005730::nucleolus confident hh_2f6h_X_1::34-83,85-119,121-190,193-228 very confident psy10329 606 Q9QYF3::Unconventional myosin-Va ::Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.::Rattus norvegicus (taxid: 10116) portable COG5022::Myosin heavy chain [Cytoskeleton] 99.35::293-582 PF01843::DIL 99.97::467-568 GO:0043234::protein complex confident hh_2f6h_X_1::226-254,259-262,287-359,365-368,371-515,518-586 very confident psy13278 174 Q9QYF3::Unconventional myosin-Va ::Processive actin-based motor that can move in large steps approximating the 36-nm pseudo-repeat of the actin filament. Involved in melanosome transport. May also be required for some polarization process involved in dendrite formation.::Rattus norvegicus (taxid: 10116) portable COG5022::Myosin heavy chain [Cytoskeleton] 99.21::17-126 PF01843::DIL 99.96::17-110 GO:0043234::protein complex confident hh_2f6h_X_1::3-49,51-105,107-152,156-174 very confident psy5412 116 Q99323::Myosin heavy chain, non-muscle ::Nonmuscle myosin appears to be responsible for cellularization. Required for morphogenesis and cytokinesis.::Drosophila melanogaster (taxid: 7227) confident COG5022::Myosin heavy chain [Cytoskeleton] 99.50::28-116 PF02736::Myosin_N 99.13::34-75 GO:0005913::cell-cell adherens junction confident hh_2ycu_A_1::30-116 very confident psy8139 1101 Q23551::Twitchin ::Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.::Caenorhabditis elegans (taxid: 6239) portable COG5022::Myosin heavy chain [Cytoskeleton] 98.50::37-203 PF07679::I-set 99.22::453-542 GO:0030017::sarcomere confident hh_2jll_A_1::452-457,459-553,557-667,714-740,742-783,786-811,824-830,843-852,854-863,869-895 very confident psy3434 83 P25295::Tubulin gamma chain ::Tubulin is the major constituent of microtubules. Gamma tubulin is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome, suggesting that it is involved in the minus-end nucleation of microtubule assembly.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5023::Tubulin [Cytoskeleton] 99.94::9-83 PF00091::Tubulin 99.05::11-66 GO:0000242::pericentriolar material very confident hh_3cb2_A_1::8-83 very confident psy3432 695 Q32KM1::Tubulin gamma-2 chain ::Tubulin is the major constituent of microtubules. Gamma tubulin is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. Pericentriolar matrix component that regulates alpha/beta tubulin minus-end nucleation, centrosome duplication and spindle formation.::Bos taurus (taxid: 9913) confident COG5023::Tubulin [Cytoskeleton] 100.00::6-461 PF00091::Tubulin 100.00::17-249 GO:0000242::pericentriolar material very confident hh_3cb2_A_2::439-500,524-685 very confident psy8705 200 P68369::Tubulin alpha-1A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Mus musculus (taxid: 10090) portable COG5023::Tubulin [Cytoskeleton] 100.00::43-200 PF00091::Tubulin 99.69::45-132 GO:0005200::structural constituent of cytoskeleton confident hh_3ryc_A_1::43-200 very confident psy17702 454 Q13885::Tubulin beta-2A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-431 PF00091::Tubulin 100.00::3-223 GO:0005794::Golgi apparatus very confident hh_3ryc_B_1::1-430 very confident psy17503 277 Q24560::Tubulin beta-1 chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Drosophila melanogaster (taxid: 7227) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-272 PF00091::Tubulin 100.00::3-210 GO:0005794::Golgi apparatus very confident hh_3ryc_B_1::1-56,58-274 very confident psy9165 290 P68366::Tubulin alpha-4A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) confident COG5023::Tubulin [Cytoskeleton] 100.00::19-290 PF00091::Tubulin 100.00::21-209 GO:0005829::cytosol confident hh_3ryc_A_1::19-54,56-290 very confident psy382 536 P68366::Tubulin alpha-4A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) confident COG5023::Tubulin [Cytoskeleton] 100.00::150-532 PF00091::Tubulin 99.96::152-301 GO:0005829::cytosol confident bp_3ryc_A_1::307-526 very confident psy14409 451 P68369::Tubulin alpha-1A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Mus musculus (taxid: 10090) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-443 PF00091::Tubulin 100.00::3-225 GO:0005829::cytosol very confident hh_3ryc_A_1::1-441 very confident psy11081 280 P68369::Tubulin alpha-1A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Mus musculus (taxid: 10090) confident COG5023::Tubulin [Cytoskeleton] 100.00::1-277 PF00091::Tubulin 100.00::2-277 GO:0005829::cytosol very confident hh_3ryc_A_1::1-34,63-97,130-277 very confident psy2780 451 P68369::Tubulin alpha-1A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Mus musculus (taxid: 10090) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-443 PF00091::Tubulin 100.00::3-225 GO:0005829::cytosol very confident hh_3ryc_A_1::1-441 very confident psy17297 456 Q13885::Tubulin beta-2A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-434 PF00091::Tubulin 100.00::3-222 GO:0005829::cytosol very confident hh_3ryc_B_1::1-434 very confident psy12090 371 Q13885::Tubulin beta-2A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-360 PF00091::Tubulin 100.00::3-223 GO:0005829::cytosol very confident hh_3ryc_B_1::1-360 very confident psy9380 195 Q13885::Tubulin beta-2A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-183 PF00091::Tubulin 100.00::3-172 GO:0005876::spindle microtubule very confident hh_3ryc_B_1::1-183 very confident psy17915 440 P68371::Tubulin beta-4B chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) very confident COG5023::Tubulin [Cytoskeleton] 100.00::168-440 PF00091::Tubulin 100.00::170-390 GO:0005886::plasma membrane very confident hh_3ryc_B_1::168-440 very confident psy14218 99 Q13885::Tubulin beta-2A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-96 PF00091::Tubulin 99.81::1-93 GO:0005886::plasma membrane very confident hh_3ryc_B_1::1-95 very confident psy11082 319 P05213::Tubulin alpha-1B chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Mus musculus (taxid: 10090) very confident COG5023::Tubulin [Cytoskeleton] 100.00::2-318 PF00091::Tubulin 99.89::2-99 GO:0040039::inductive cell migration very confident hh_3ryc_A_1::2-111,128-319 very confident psy15389 864 P05213::Tubulin alpha-1B chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Mus musculus (taxid: 10090) very confident COG5023::Tubulin [Cytoskeleton] 100.00::1-446 PF00091::Tubulin 100.00::495-718 GO:0051084::'de novo' posttranslational protein folding very confident hh_3ryc_A_2::493-863 very confident psy11415 70 P68369::Tubulin alpha-1A chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Mus musculus (taxid: 10090) very confident COG5023::Tubulin [Cytoskeleton] 99.80::1-60 PF03953::Tubulin_C 99.90::1-65 GO:0005829::cytosol very confident hh_3ryc_A_1::1-69 very confident psy14216 329 P68371::Tubulin beta-4B chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Homo sapiens (taxid: 9606) very confident COG5023::Tubulin [Cytoskeleton] 100.00::2-318 PF03953::Tubulin_C 99.95::144-266 GO:0005886::plasma membrane very confident hh_3ryc_B_1::2-326 very confident psy6839 264 P02553::Tubulin alpha chain (Fragment) ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Lytechinus pictus (taxid: 7653) confident COG5023::Tubulin [Cytoskeleton] 100.00::6-263 PF03953::Tubulin_C 99.67::105-206 GO:0040039::inductive cell migration confident hh_3ryc_A_1::7-15,20-155,166-264 very confident psy7545 235 Q9BUK6::Protein misato homolog 1 ::Involved in the regulation of mitochondrial distribution and morphology.::Homo sapiens (taxid: 9606) portable COG5023::Tubulin [Cytoskeleton] 100.00::6-214 PF14881::Tubulin_3 100.00::38-216 GO:0044446::intracellular organelle part confident hh_3ryc_B_1::6-28,30-81,88-149,151-180,182-214 very confident psy593 70 Q8SS99::Tubulin beta chain ::Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha-chain.::Encephalitozoon cuniculi (strain GB-M1) (taxid: 284813) confident COG5023::Tubulin [Cytoskeleton] 99.45::1-46 no hit no match GO:0005829::cytosol confident hh_3ryc_B_1::1-45 very confident psy7892 240 Q9FMH5::Putative cyclin-A3-1 ::::Arabidopsis thaliana (taxid: 3702) confident COG5024::Cyclin [Cell division and chromosome partitioning] 100.00::73-239 PF00134::Cyclin_N 99.95::94-224 GO:0000278::mitotic cell cycle confident hh_2w96_A_1::81-88,92-116,122-239 very confident psy17187 123 P30282::G1/S-specific cyclin-D3 ::Regulatory component of the cyclin D3-CDK4 (DC) complex that phosphorylates and inhibits members of the retinoblastoma (RB) protein family including RB1 and regulates the cell-cycle during G(1)/S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB/E2F complex and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also substrate for SMAD3, phosphorylating SMAD3 in a cell-cycle-dependent manner and repressing its transcriptional activity. Component of the ternary complex, cyclin D3/CDK4/CDKN1B, required for nuclear translocation and activity of the cyclin D-CDK4 complex.::Mus musculus (taxid: 10090) portable COG5024::Cyclin [Cell division and chromosome partitioning] 99.94::9-117 PF00134::Cyclin_N 99.94::5-106 GO:0000307::cyclin-dependent protein kinase holoenzyme complex confident hh_2b9r_A_1::1-117 very confident psy17189 95 P30282::G1/S-specific cyclin-D3 ::Regulatory component of the cyclin D3-CDK4 (DC) complex that phosphorylates and inhibits members of the retinoblastoma (RB) protein family including RB1 and regulates the cell-cycle during G(1)/S transition. Phosphorylation of RB1 allows dissociation of the transcription factor E2F from the RB/E2F complex and the subsequent transcription of E2F target genes which are responsible for the progression through the G(1) phase. Hypophosphorylates RB1 in early G(1) phase. Cyclin D-CDK4 complexes are major integrators of various mitogenenic and antimitogenic signals. Also substrate for SMAD3, phosphorylating SMAD3 in a cell-cycle-dependent manner and repressing its transcriptional activity. Component of the ternary complex, cyclin D3/CDK4/CDKN1B, required for nuclear translocation and activity of the cyclin D-CDK4 complex.::Mus musculus (taxid: 10090) portable COG5024::Cyclin [Cell division and chromosome partitioning] 98.83::18-88 PF00134::Cyclin_N 98.85::27-88 GO:0000307::cyclin-dependent protein kinase holoenzyme complex confident hh_2w96_A_1::1-7,9-13,15-23,25-38,40-87 very confident psy18159 294 P39963::G2/mitotic-specific cyclin-B3 ::Cyclins are positive regulatory subunits of the cyclin-dependent kinases (CDKs), and thereby play an essential role in the control of the cell cycle, notably via their destruction during cell division. Could be involved at the G2/M (mitosis or meiosis) transition. G2/M cyclins accumulate steadily during G2 and are abruptly destroyed at mitosis.::Gallus gallus (taxid: 9031) confident COG5024::Cyclin [Cell division and chromosome partitioning] 100.00::67-292 PF00134::Cyclin_N 99.94::88-218 GO:0005737::cytoplasm confident hh_2w96_A_1::75-82,86-110,116-293 very confident psy2129 498 P51943::Cyclin-A2 ::Essential for the control of the cell cycle at the G1/S (start) and the G2/M (mitosis) transitions.::Mus musculus (taxid: 10090) confident COG5024::Cyclin [Cell division and chromosome partitioning] 100.00::189-493 PF00134::Cyclin_N 99.92::202-376 GO:0005829::cytosol confident hh_2ivx_A_1::227-269,318-339,341-445,448-472,474-483 very confident psy14722 87 Q9FMH5::Putative cyclin-A3-1 ::::Arabidopsis thaliana (taxid: 3702) confident COG5024::Cyclin [Cell division and chromosome partitioning] 99.69::4-87 PF00134::Cyclin_N 99.57::11-87 GO:0005923::tight junction confident hh_2w96_A_1::3-87 very confident psy16012 712 P47794::G1/S-specific cyclin-E1 ::Essential for the control of the cell cycle at the G1/S (start) transition.::Danio rerio (taxid: 7955) confident COG5024::Cyclin [Cell division and chromosome partitioning] 99.96::212-440 PF00134::Cyclin_N 99.84::236-342 GO:0051726::regulation of cell cycle confident hh_1w98_B_1::105-131,134-154,246-280,282-362,367-451,455-462,464-467,476-492 very confident psy16565 377 P34624::Uncharacterized cyclin-like protein ZK353.1 ::::Caenorhabditis elegans (taxid: 6239) very confident COG5024::Cyclin [Cell division and chromosome partitioning] 95.40::167-284 PF08613::Cyclin 99.95::117-261 GO:0005634::nucleus very confident hh_2pmi_B_1::91-102,116-139,145-145,149-237,239-277 confident psy447 417 P14734::Protein fork head ::Fkh promotes terminal as opposed to segmental development. In the absence of fkh, this developmental switch does not occur. The nuclear localization of the fkh protein suggest that fkh regulates the transcription of other, subordinate, genes.::Drosophila melanogaster (taxid: 7227) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.81::120-220 PF00250::Fork_head 100.00::123-218 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident hh_1vtn_C_1::121-221 very confident psy12666 347 Q95V55::Forkhead box protein O ::Transcription factor involved in the regulation of the insulin signaling pathway. Consistently activates both the downstream target Thor\d4EBP and the feedback control target InR. Involved in negative regulation of the cell cycle, modulating cell growth and proliferation. In response to cellular stresses, such as nutrient deprivation or increased levels of reactive oxygen species, foxo is activated and inhibits growth through the action of target genes such as Thor. Foxo activated in the adult fat body can regulate lifespan in adults; an insulin peptide itself may function as one secondary messenger of insulin-regulated aging. Also regulates Lip4, homolog of human acid lipases, thereby acting as a key modulator of lipid metabolism by insulin signaling and integrates insulin responses to glucose and lipid homeostasis.::Drosophila melanogaster (taxid: 7227) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.64::43-140 PF00250::Fork_head 99.96::51-137 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident hh_1e17_A_1::46-69,78-159 very confident psy4401 147 Q63247::Forkhead box protein J1 ::May play an important role in cell fate determination during lung development and in spermatogenesis.::Rattus norvegicus (taxid: 10116) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 98.97::1-37 PF00250::Fork_head 99.72::1-50 GO:0003002::regionalization confident hh_1kq8_A_1::1-50 very confident psy723 395 Q64732::Forkhead box protein B1 ::::Mus musculus (taxid: 10090) portable COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.78::94-186 PF00250::Fork_head 100.00::98-190 GO:0003677::DNA binding confident hh_2hfh_A_1::97-194 very confident psy6883 414 P79772::Forkhead box protein D3 ::Binds to the consensus sequence 5'-A[AT]T[AG]TTTGTTT-3' and acts as a transcriptional repressor. Also acts as a transcriptional activator. Promotes development of neural crest cells from neural tube progenitors. Restricts neural progenitor cells to the neural crest lineage while suppressing interneuron differentiation. Required for maintenance of pluripotent cells in the pre-implantation and peri-implantation stages of embryogenesis.::Gallus gallus (taxid: 9031) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.82::134-233 PF00250::Fork_head 100.00::145-240 GO:0003690::double-stranded DNA binding confident hh_2hfh_A_1::143-244 very confident psy9499 289 P79772::Forkhead box protein D3 ::Binds to the consensus sequence 5'-A[AT]T[AG]TTTGTTT-3' and acts as a transcriptional repressor. Also acts as a transcriptional activator. Promotes development of neural crest cells from neural tube progenitors. Restricts neural progenitor cells to the neural crest lineage while suppressing interneuron differentiation. Required for maintenance of pluripotent cells in the pre-implantation and peri-implantation stages of embryogenesis.::Gallus gallus (taxid: 9031) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.83::114-214 PF00250::Fork_head 100.00::124-219 GO:0003690::double-stranded DNA binding confident hh_2hfh_A_1::122-224 very confident psy11227 148 Q61080::Forkhead box protein F1 ::Probable transcription activator for a number of lung-specific genes.::Mus musculus (taxid: 10090) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.85::21-114 PF00250::Fork_head 100.00::27-122 GO:0003690::double-stranded DNA binding confident hh_2hdc_A_1::26-122 very confident psy15601 144 A4IFD2::Forkhead box protein P1 ::Transcriptional repressor that plays an important role in the specification and differentiation of lung epithelium. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Essential transcriptional regulator of B-cell development.::Bos taurus (taxid: 9913) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.64::1-66 PF00250::Fork_head 99.96::1-65 GO:0005730::nucleolus very confident hh_2a07_F_1::1-75 very confident psy14921 148 Q9UPW0::Forkhead box protein J3 ::::Homo sapiens (taxid: 9606) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.88::8-101 PF00250::Fork_head 100.00::11-99 GO:0005730::nucleolus confident hh_2hfh_A_1::10-93 very confident psy7734 349 P85037::Forkhead box protein K1 ::Transcriptional regulator that binds to the upstream enhancer region (CCAC box) of myoglobin gene. Has a role in myogenic differentiation and in remodeling processes of adult muscles that occur in response to physiological stimuli.::Homo sapiens (taxid: 9606) portable COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.93::32-348 PF00250::Fork_head 99.92::290-349 GO:0006351::transcription, DNA-dependent confident hh_3l2c_A_1::285-348 very confident psy16819 289 Q9WVH3::Forkhead box protein O4 ::Transcription factor involved in the regulation of the insulin signaling pathway. Binds to insulin-response elements (IREs) and can activate transcription of IGFBP1. Down-regulates expression of HIF1A and suppresses hypoxia-induced transcriptional activation of HIF1A-modulated genes. Also involved in negative regulation of the cell cycle (By similarity). Represses smooth muscle cell differentiation by inhibiting the transcriptional coactivator activity of myocardin.::Mus musculus (taxid: 10090) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.88::106-288 PF00250::Fork_head 99.97::110-204 GO:0007095::mitotic G2 DNA damage checkpoint confident hh_3l2c_A_1::99-167,171-182,185-199 very confident psy13625 322 Q99958::Forkhead box protein C2 ::Transcriptional activator. Might be involved in the formation of special mesenchymal tissues.::Homo sapiens (taxid: 9606) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.84::51-152 PF00250::Fork_head 100.00::63-158 GO:0007219::Notch signaling pathway confident hh_2hfh_A_1::61-161 very confident psy13925 344 P32028::Fork head domain-containing protein FD4 ::Involved in development during embryogenesis.::Drosophila melanogaster (taxid: 7227) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.78::9-104 PF00250::Fork_head 100.00::13-108 GO:0009605::response to external stimulus confident hh_2hfh_A_1::12-112 very confident psy8120 463 P58012::Forkhead box protein L2 ::Transcriptional regulator. Critical factor essential for ovary differentiation and maintenance, and repression of the genetic program for somatic testis determination. Prevents trans-differentiation of ovary to testis through transcriptional repression of the Sertoli cell-promoting gene SOX9 (By similarity). Has apoptotic activity in ovarian cells. Suppresses ESR1-mediated transcription of PTGS2/COX2 stimulated by tamoxifen (By similarity). Is a regulator of CYP19 expression (By similarity). Participates in SMAD3-dependent transcription of FST via the intronic SMAD-binding element (By similarity). Is a transcriptional repressor of STAR. Activates SIRT1 transcription under cellular stress conditions. Activates transcription of OSR2.::Homo sapiens (taxid: 9606) portable COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.84::280-381 PF00250::Fork_head 100.00::288-383 GO:0030154::cell differentiation confident hh_2hfh_A_1::287-387 very confident psy977 485 P32028::Fork head domain-containing protein FD4 ::Involved in development during embryogenesis.::Drosophila melanogaster (taxid: 7227) confident COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.80::6-102 PF00250::Fork_head 100.00::13-108 GO:0040035::hermaphrodite genitalia development confident hh_2hfh_A_1::12-112 very confident psy6789 331 Q17381::Defective pharyngeal development protein 4 ::Acts as a transcription factor required for formation of the pharyngeal primordium. Binds to the consensus sequence 5'-T[AG]TT[TG][AG][TC]-3' with variations of the sequence affecting onset of target gene expression. Activates a wide array of pharyngeal genes including ceh-22 and myo-2 and represses ectodermal genes lin-26 and elt-3, ensuring pharyngeal cell fate. Required for recruitment of htz-1 to a subset of pharyngeal promoters to ensure gene activation and also acts synergistically with tbx-2 in pharyngeal development. Acts in the regulation of diet-restriction-mediated longevity by increasing expression of sod-1, sod-2, sod-4 and sod-5 but not sod-3.::Caenorhabditis elegans (taxid: 6239) portable COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.76::45-140 PF00250::Fork_head 100.00::51-130 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_3l2c_A_1::47-127 very confident psy15918 376 P32031::Fork head domain transcription factor slp2 ::Transcription factor involved in segmentation. May function primarily as a segment polarity gene. Different levels of slp activity seem to be required in different segments.::Drosophila melanogaster (taxid: 7227) portable COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.83::107-203 PF00250::Fork_head 100.00::117-212 GO:0048468::cell development confident hh_2c6y_A_1::113-212 very confident psy15415 128 Q8K3Q3::Forkhead box protein N4 ::::Mus musculus (taxid: 10090) portable COG5025::Transcription factor of the Forkhead/HNF3 family [Transcription] 99.68::2-67 PF00250::Fork_head 99.96::2-69 GO:0048731::system development confident hh_2hdc_A_1::2-59,62-74 very confident psy15534 157 P04807::Hexokinase-2 ::Main glucose phosphorylating enzyme. May play a regulatory role in both induction and repression of gene expression by glucose.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5026::Hexokinase [Carbohydrate transport and metabolism] 99.96::26-156 PF00349::Hexokinase_1 100.00::32-156 GO:0043234::protein complex confident hh_3f9m_A_1::26-55,59-156 very confident psy6344 142 P27881::Hexokinase-2 ::::Rattus norvegicus (taxid: 10116) confident COG5026::Hexokinase [Carbohydrate transport and metabolism] 100.00::2-142 PF00349::Hexokinase_1 100.00::3-142 GO:0043234::protein complex confident hh_1cza_N_1::5-142 very confident psy15536 200 P27881::Hexokinase-2 ::::Rattus norvegicus (taxid: 10116) confident COG5026::Hexokinase [Carbohydrate transport and metabolism] 100.00::45-200 PF00349::Hexokinase_1 100.00::44-200 GO:0043234::protein complex confident hh_1cza_N_1::43-50,55-200 very confident psy11528 140 P33284::Hexokinase ::::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) confident COG5026::Hexokinase [Carbohydrate transport and metabolism] 100.00::6-135 PF00349::Hexokinase_1 99.89::6-72 GO:0043234::protein complex confident hh_1cza_N_1::5-97,100-103,107-135 very confident psy4666 828 P35557::Glucokinase ::Catalyzes the initial step in utilization of glucose by the beta-cell and liver at physiological glucose concentration. Glucokinase has a high Km for glucose, and so it is effective only when glucose is abundant. The role of GCK is to provide G6P for the synthesis of glycogen. Pancreatic glucokinase plays an important role in modulating insulin secretion. Hepatic glucokinase helps to facilitate the uptake and conversion of glucose by acting as an insulin-sensitive determinant of hepatic glucose usage.::Homo sapiens (taxid: 9606) portable COG5026::Hexokinase [Carbohydrate transport and metabolism] 100.00::2-487 PF03727::Hexokinase_2 100.00::257-487 GO:0005829::cytosol confident hh_1cza_N_2::2-122,152-154,203-284,287-383,385-393,395-400,402-487 very confident psy15537 80 A2PYL6::Hexokinase-2 ::::Equus caballus (taxid: 9796) confident COG5026::Hexokinase [Carbohydrate transport and metabolism] 99.60::1-76 PF03727::Hexokinase_2 99.91::1-73 GO:0043234::protein complex confident hh_1bdg_A_1::1-74 very confident psy2116 102 Q8LI34::Putative MYST-like histone acetyltransferase 1 ::Histone acetyltransferase which may be involved in transcriptional activation.::Oryza sativa subsp. japonica (taxid: 39947) confident COG5027::SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics] 99.92::35-102 PF00096::zf-C2H2 96.86::68-89 GO:0043966::histone H3 acetylation confident hh_2ozu_A_1::34-102 very confident psy13714 125 Q6FPH9::Histone acetyltransferase ESA1 ::Catalytic component of the NuA4 histone acetyltransferase (HAT) complex which is involved in epigenetic transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4, H3, H2B, H2A and H2A variant H2A.Z. Acetylates histone H4 to form H4K5ac, H4K8ac, H4K12ac and H4K16ac, histone H3 to form H3K14ac, histone H2B to form H2BK16ac, and histone H2A to form H2AK4ac and H2AK7ac. Acetylation of histone H4 is essential for DNA double-strand break repair through homologous recombination. Involved in cell cycle progression. Recruitment to promoters depends on H3K4me.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident COG5027::SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics] 100.00::2-125 PF01853::MOZ_SAS 100.00::12-124 GO:0005829::cytosol confident hh_2pq8_A_1::2-87,98-124 very confident psy2114 147 Q5SVQ0::Histone acetyltransferase KAT7 ::Component of the HBO1 complex which has a histone H4-specific acetyltransferase activity, a reduced activity toward histone H3 and is responsible for the bulk of histone H4 acetylation in vivo. Through chromatin acetylation it may regulate DNA replication and act as a coactivator of TP53-dependent transcription. Specifically represses AR-mediated transcription.::Mus musculus (taxid: 10090) confident COG5027::SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics] 100.00::9-134 PF01853::MOZ_SAS 100.00::23-134 GO:0045892::negative regulation of transcription, DNA-dependent very confident hh_2pq8_A_1::9-20,24-118,120-134 very confident psy8112 687 Q5XI06::Histone acetyltransferase KAT8 ::Histone acetyltransferase which may be involved in transcriptional activation. May influence the function of ATM. As part of the MSL complex it is involved in acetylation of nucleosomal histone H4 producing specifically H4K16ac. As part of the NSL complex it may be involved in acetylation of nucleosomal histone H4 on several lysine residues. That activity is less specific than the one of the MSL complex.::Rattus norvegicus (taxid: 10116) confident COG5027::SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics] 100.00::1-673 PF01853::MOZ_SAS 100.00::459-645 GO:0072487::MSL complex confident hh_2pq8_A_1::103-226,524-605,607-677 very confident psy6980 760 Q8LI34::Putative MYST-like histone acetyltransferase 1 ::Histone acetyltransferase which may be involved in transcriptional activation.::Oryza sativa subsp. japonica (taxid: 39947) confident COG5027::SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics] 100.00::272-549 PF01853::MOZ_SAS 100.00::331-520 GO:0072487::MSL complex confident hh_2ozu_A_1::268-476,478-510,514-553 very confident psy8088 282 Q07171::Gelsolin ::Calcium-regulated, actin-modulating protein that binds to the plus (or barbed) ends of actin monomers or filaments, preventing monomer exchange (end-blocking or capping). It can promote the assembly of monomers into filaments (nucleation) as well as sever filaments already formed.::Drosophila melanogaster (taxid: 7227) confident COG5028::Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] 96.17::205-271 PF00626::Gelsolin 99.65::76-153 GO:0005829::cytosol confident hh_3fg6_A_1::4-16,19-59,63-128,136-142,146-157,159-169,176-202,204-222,224-278 very confident psy555 142 Q24020::Protein flightless-1 ::May play a key role in embryonic cellularization by interacting with both the cytoskeleton and other cellular components. Alternatively, it may play a structural role in indirect flight muscle. Vital for embryonic development.::Drosophila melanogaster (taxid: 7227) confident COG5028::Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] 97.38::57-125 PF00626::Gelsolin 99.74::57-128 GO:0030154::cell differentiation confident hh_3fg6_A_1::8-29,31-37,40-106,108-139 very confident psy13827 819 Q3SZP7::Villin-1 ::Epithelial cell-specific Ca(2+)-regulated actin-modifying protein that modulates the reorganization of microvillar actin filaments. Plays a role in the actin nucleation, actin filament bundle assembly, actin filament capping and severing. Binds phosphatidylinositol 4,5-bisphosphate (PIP2) and lysophosphatidic acid (LPA); binds LPA with higher affinity than PIP2. Binding to LPA increases its phosphorylation by SRC and inhibits all actin-modifying activities. Binding to PIP2 inhibits actin-capping and -severing activities but enhances actin-bundling activity. Regulates the intestinal epithelial cell morphology, cell invasion, cell migration and apoptosis. Protects against apoptosis induced by dextran sodium sulfate (DSS) in the gastrointestinal epithelium. Appears to regulate cell death by maintaining mitochondrial integrity. Enhances hepatocyte growth factor (HGF)-induced epithelial cell motility, chemotaxis and wound repair.::Bos taurus (taxid: 9913) confident COG5028::Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] 94.03::543-610 PF00626::Gelsolin 99.35::538-612 GO:0043234::protein complex confident hh_3fg6_A_1::260-267,269-285,289-368,370-485,487-624 very confident psy12437 901 Q75B16::Protein transport protein SEC24 ::Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG5028::Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] 100.00::267-901 PF04811::Sec23_trunk 100.00::312-549 GO:0005829::cytosol confident hh_3eh1_A_1::245-260,262-309,311-901 very confident psy16627 713 Q75B16::Protein transport protein SEC24 ::Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG5028::Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] 100.00::21-713 PF04811::Sec23_trunk 100.00::124-361 GO:0005829::cytosol confident hh_3eh1_A_1::26-53,55-72,74-121,123-713 very confident psy14673 912 Q75B16::Protein transport protein SEC24 ::Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG5028::Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] 100.00::267-903 PF04811::Sec23_trunk 100.00::312-549 GO:0005829::cytosol confident hh_3eh1_A_1::245-309,311-903 very confident psy16628 107 Q6BT80::Protein transport protein SEC24 ::Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) portable COG5028::Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion] 99.84::10-107 PF04811::Sec23_trunk 99.93::27-107 GO:0044444::cytoplasmic part confident hh_1m2v_B_1::3-9,15-21,25-107 very confident psy6404 361 P20133::Geranylgeranyl transferase type-2 subunit beta ::Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to proteins having the C-terminal -XCC or -XCXC, where both cysteines may become modified. Acts on YPT1 and SEC4.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5029::CAL1 Prenyltransferase, beta subunit [Posttranslational modification, protein turnover, chaperones] 100.00::16-339 PF13249::Prenyltrans_2 99.76::82-211 GO:0005829::cytosol confident hh_1n4q_B_2::3-19,21-124,141-230 very confident psy15672 271 P49356::Protein farnesyltransferase subunit beta ::Catalyzes the transfer of a farnesyl moiety from farnesyl pyrophosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.::Homo sapiens (taxid: 9606) confident COG5029::CAL1 Prenyltransferase, beta subunit [Posttranslational modification, protein turnover, chaperones] 100.00::2-270 PF13249::Prenyltrans_2 99.86::39-153 GO:0005829::cytosol confident hh_2h6f_B_1::1-271 very confident psy18133 177 P20133::Geranylgeranyl transferase type-2 subunit beta ::Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to proteins having the C-terminal -XCC or -XCXC, where both cysteines may become modified. Acts on YPT1 and SEC4.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5029::CAL1 Prenyltransferase, beta subunit [Posttranslational modification, protein turnover, chaperones] 100.00::2-172 PF13249::Prenyltrans_2 99.73::18-121 GO:0018344::protein geranylgeranylation confident hh_3dss_B_1::2-99,103-145,148-174 very confident psy15438 358 Q5E9B3::Geranylgeranyl transferase type-2 subunit beta ::Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC, -XCXC and -CCXX C-terminal, such as RAB1A, RAB3A and RAB5A respectively.::Bos taurus (taxid: 9913) very confident COG5029::CAL1 Prenyltransferase, beta subunit [Posttranslational modification, protein turnover, chaperones] 100.00::11-355 PF13249::Prenyltrans_2 99.81::68-179 GO:0018344::protein geranylgeranylation confident hh_3dss_B_1::1-269,275-279,312-336,339-356 very confident psy2523 691 P84091::AP-2 complex subunit mu ::Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but is itself unable to bind directly to membrane components. Clathrin-associated adaptor protein (AP) complexes which can bind directly to both the clathrin lattice and to the lipid and protein components of membranes are considered to be the major clathrin adaptors contributing the CCV formation. AP-2 also serves as a cargo receptor to selectively sort the membrane proteins involved in receptor-mediated endocytosis. AP-2 seems to play a role in the recycling of synaptic vesicle membranes from the presynaptic surface. AP-2 recognizes Y-X-X-[FILMV] (Y-X-X-Phi) and [ED]-X-X-X-L-[LI] endocytosis signal motifs within the cytosolic tails of transmembrane cargo molecules. AP-2 may also play a role in maintaining normal post-endocytic trafficking through the ARF6-regulated, non-clathrin pathway. The AP-2 mu subunit binds to transmembrane cargo proteins; it recognizes the Y-X-X-Phi motifs. The surface region interacting with to the Y-X-X-Phi motif is inaccessible in cytosolic AP-2, but becomes accessible through a conformational change following phosphorylation of AP-2 mu subunit at 'Tyr-156' in membrane-associated AP-2. The membrane-specific phosphorylation event appears to involve assembled clathrin which activates the AP-2 mu kinase AAK1 (By similarity). Plays a role in endocytosis of frizzled family members upon Wnt signaling.::Mus musculus (taxid: 10090) very confident COG5030::APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion] 99.43::1-137 PF00928::Adap_comp_sub 100.00::218-504 GO:0005739::mitochondrion confident hh_1i31_A_1::183-288,299-504 very confident psy16332 359 Q66H80::Coatomer subunit delta ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors.::Rattus norvegicus (taxid: 10116) confident COG5030::APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion] 96.33::42-128 PF00928::Adap_comp_sub 99.86::129-307 GO:0005783::endoplasmic reticulum confident hh_2vgl_M_1::40-52,54-69,74-155,162-169,172-187,190-307 very confident psy17615 459 P53676::AP-3 complex subunit mu-1 ::Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes.::Rattus norvegicus (taxid: 10116) very confident COG5030::APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion] 99.87::1-134 PF00928::Adap_comp_sub 100.00::187-459 GO:0005829::cytosol confident hh_1i31_A_1::123-145,147-147,152-158,181-289,292-352,378-391,393-424,426-459 very confident psy918 504 Q9BXS5::AP-1 complex subunit mu-1 ::Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the trans-Golgi network (TGN) and endosomes. The AP complexes mediate the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.::Homo sapiens (taxid: 9606) very confident COG5030::APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion] 99.77::99-231 PF00928::Adap_comp_sub 100.00::253-504 GO:0005829::cytosol very confident hh_4en2_M_1::254-504 very confident psy12905 611 Q66H80::Coatomer subunit delta ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors.::Rattus norvegicus (taxid: 10116) confident COG5030::APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion] 98.29::62-189 PF00928::Adap_comp_sub 99.92::464-611 GO:0006890::retrograde vesicle-mediated transport, Golgi to ER confident hh_2vgl_M_1::61-88,93-203,219-220,228-228,233-234,251-251,256-256,259-260,264-264,275-275,305-312,438-439,463-551,558-564,567-583,586-586,589-611 very confident psy14094 149 Q3ZBS3::AP-1 complex subunit sigma-2 ::Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.::Bos taurus (taxid: 9913) very confident COG5030::APS2 Clathrin adaptor complex, small subunit [Intracellular trafficking and secretion] 100.00::7-147 PF01217::Clat_adaptor_s 100.00::7-147 GO:0019886::antigen processing and presentation of exogenous peptide antigen via MHC class II very confident hh_1w63_Q_1::7-148 very confident psy11388 90 O00329::Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform ::Phosphoinositide-3-kinase (PI3K) that phosphorylates PftdIns(4,5)P2 (Phosphatidylinositol 4,5-bisphosphate) to generate phosphatidylinositol 3,4,5-trisphosphate (PIP3). PIP3 plays a key role by recruiting PH domain-containing proteins to the membrane, including AKT1 and PDPK1, activating signaling cascades involved in cell growth, survival, proliferation, motility and morphology. Mediates immune responses. Plays a role in B-cell development, proliferation, migration, and function. Required for B-cell receptor (BCR) signaling. Mediates B-cell proliferation response to anti-IgM, anti-CD40 and IL4 stimulation. Promotes cytokine production in response to TLR4 and TLR9. Required for antibody class switch mediated by TLR9. Involved in the antigen presentation function of B-cells. Involved in B-cell chemotaxis in response to CXCL13 and sphingosine 1-phosphate (S1P). Required for proliferation, signaling and cytokine production of naive, effector and memory T-cells. Required for T-cell receptor (TCR) signaling. Mediates TCR signaling events at the immune synapse. Activation by TCR leads to antigen-dependent memory T-cell migration and retention to antigenic tissues. Together with PIK3CG participates in T-cell development. Contributes to T-helper cell expansion and differentiation. Required for T-cell migration mediated by homing receptors SELL/CD62L, CCR7 and S1PR1 and antigen dependent recruitment of T-cells. Together with PIK3CG is involved in natural killer (NK) cell development and migration towards the sites of inflammation. Participates in NK cell receptor activation. Have a role in NK cell maturation and cytokine production. Together with PIK3CG is involved in neutrophil chemotaxis and extravasation. Together with PIK3CG participates in neutrophil respiratory burst. Have important roles in mast-cell development and mast cell mediated allergic response. Involved in stem cell factor (SCF)-mediated proliferation, adhesion and migration. Required for allergen-IgE-induced degranulation and cytokine release. The lipid kinase activity is required for its biological function.::Homo sapiens (taxid: 9606) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 98.71::3-87 PF00454::PI3_PI4_kinase 96.68::2-37 GO:0001727::lipid kinase activity confident hh_2y3a_A_1::2-90 very confident psy15442 599 Q9Y4A5::Transformation/transcription domain-associated protein ::Adapter protein, which is found in various multiprotein chromatin complexes with histone acetyltransferase activity (HAT), which gives a specific tag for epigenetic transcription activation. Component of the NuA4 histone acetyltransferase complex which is responsible for acetylation of nucleosomal histones H4 and H2A. Plays a central role in MYC transcription activation, and also participates in cell transformation by MYC. Required for p53/TP53-, E2F1- and E2F4-mediated transcription activation. Also involved in transcription activation mediated by the adenovirus E1A, a viral oncoprotein that deregulates transcription of key genes. Probably acts by linking transcription factors such as E1A, MYC or E2F1 to HAT complexes such as STAGA thereby allowing transcription activation. Probably not required in the steps following histone acetylation in processes of transcription activation. May be required for the mitotic checkpoint and normal cell cycle progression.::Homo sapiens (taxid: 9606) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 100.00::10-563 PF00454::PI3_PI4_kinase 100.00::306-564 GO:0005730::nucleolus confident hh_1e7u_A_1::274-313,317-340,345-437,439-442,447-457,490-492,501-564 confident psy16910 82 P0CP60::Serine/threonine-protein kinase TEL1 ::Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability.::Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 99.92::3-80 PF00454::PI3_PI4_kinase 99.92::3-77 GO:0006975::DNA damage induced protein phosphorylation confident hh_1e7u_A_1::3-23,25-78 very confident psy656 427 P42356::Phosphatidylinositol 4-kinase alpha ::Acts on phosphatidylinositol (PtdIns) in the first committed step in the production of the second messenger inositol-1,4,5,-trisphosphate.::Homo sapiens (taxid: 9606) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 100.00::97-427 PF00454::PI3_PI4_kinase 100.00::170-376 GO:0030660::Golgi-associated vesicle membrane confident hh_1e7u_A_1::24-118,120-133,165-250,253-425 very confident psy18027 165 Q6CT34::Serine/threonine-protein kinase MEC1 ::Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]-Q. Recruited to DNA lesions in order to initiates the DNA repair by homologous recombination. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, also involved in the regulation of DNA damage response mechanism. Required for cell growth and meiotic recombination.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 100.00::1-157 PF00454::PI3_PI4_kinase 100.00::1-113 GO:0031090::organelle membrane confident hh_1e7u_A_1::1-49,51-152 very confident psy9777 91 Q8BKC8::Phosphatidylinositol 4-kinase beta ::Phosphorylates phosphatidylinositol (PI) in the first committed step in the production of the second messenger inositol-1,4,5,-trisphosphate (PIP). May regulate Golgi disintegration/reorganization during mitosis, possibly via its phosphorylation (By similarity). Involved in Golgi-to-plasma membrane trafficking.::Mus musculus (taxid: 10090) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 99.30::1-91 PF00454::PI3_PI4_kinase 96.47::1-39 GO:0031090::organelle membrane confident hh_2x6h_A_1::1-9,12-32,34-90 very confident psy8358 424 Q8BKC8::Phosphatidylinositol 4-kinase beta ::Phosphorylates phosphatidylinositol (PI) in the first committed step in the production of the second messenger inositol-1,4,5,-trisphosphate (PIP). May regulate Golgi disintegration/reorganization during mitosis, possibly via its phosphorylation (By similarity). Involved in Golgi-to-plasma membrane trafficking.::Mus musculus (taxid: 10090) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 100.00::62-372 PF00454::PI3_PI4_kinase 100.00::114-316 GO:0031090::organelle membrane confident hh_1e7u_A_1::7-60,63-80,82-92,106-194,197-311,313-318,320-372 very confident psy10441 867 Q5D891::Phosphatidylinositol 3-kinase catalytic subunit type 3 ::Catalytic subunit of the PI3K complex that mediates formation of phosphatidylinositol 3-phosphate which plays a key role in initiation and maturation of autophagosomes. Involved in the transport of lysosomal enzyme precursors to lysosomes. Required for the abcission step in cytokinesis. Required for transport from early to late endosomes.::Sus scrofa (taxid: 9823) very confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 100.00::452-864 PF00613::PI3Ka 100.00::284-506 GO:0004672::protein kinase activity confident hh_3ls8_A_1::268-485,487-559,562-859 very confident psy5930 2426 Q9Y4A5::Transformation/transcription domain-associated protein ::Adapter protein, which is found in various multiprotein chromatin complexes with histone acetyltransferase activity (HAT), which gives a specific tag for epigenetic transcription activation. Component of the NuA4 histone acetyltransferase complex which is responsible for acetylation of nucleosomal histones H4 and H2A. Plays a central role in MYC transcription activation, and also participates in cell transformation by MYC. Required for p53/TP53-, E2F1- and E2F4-mediated transcription activation. Also involved in transcription activation mediated by the adenovirus E1A, a viral oncoprotein that deregulates transcription of key genes. Probably acts by linking transcription factors such as E1A, MYC or E2F1 to HAT complexes such as STAGA thereby allowing transcription activation. Probably not required in the steps following histone acetylation in processes of transcription activation. May be required for the mitotic checkpoint and normal cell cycle progression.::Homo sapiens (taxid: 9606) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 100.00::814-2426 PF01602::Adaptin_N 91.54::730-1155 GO:0043234::protein complex confident hh_1qgr_A_2::473-511,516-552,557-559,562-564,583-585,589-602,605-628,635-636,660-672,675-711,716-757,762-763,771-830,835-857,868-886,888-927,931-955,958-982,994-1095,1097-1110,1119-1156 portable psy5931 173 Q9Y4A5::Transformation/transcription domain-associated protein ::Adapter protein, which is found in various multiprotein chromatin complexes with histone acetyltransferase activity (HAT), which gives a specific tag for epigenetic transcription activation. Component of the NuA4 histone acetyltransferase complex which is responsible for acetylation of nucleosomal histones H4 and H2A. Plays a central role in MYC transcription activation, and also participates in cell transformation by MYC. Required for p53/TP53-, E2F1- and E2F4-mediated transcription activation. Also involved in transcription activation mediated by the adenovirus E1A, a viral oncoprotein that deregulates transcription of key genes. Probably acts by linking transcription factors such as E1A, MYC or E2F1 to HAT complexes such as STAGA thereby allowing transcription activation. Probably not required in the steps following histone acetylation in processes of transcription activation. May be required for the mitotic checkpoint and normal cell cycle progression.::Homo sapiens (taxid: 9606) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 98.48::1-168 PF02259::FAT 99.88::2-171 GO:0005730::nucleolus very confident hh_1xnf_A_2::57-129,143-157 confident psy3552 92 Q9VXG8::Serine/threonine-protein kinase ATR ::Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates various proteins, which collectively inhibits DNA replication and mitosis and promotes DNA repair and recombination. Phosphorylates grp/CHK1. Phosphorylates 'Ser-137' of histone variant H2AX/H2AV at sites of DNA damage, thereby regulating DNA damage response mechanism. Essential for the DNA damage checkpoint in larval imaginal disks and neuroblasts and for the DNA replication checkpoint in the embryo. Has also an essential role during early nuclear divisions in embryos, where it is required to delay mitosis in response to incomplete DNA replication. Also plays an important role during meiosis, where it may monitor double-strand-break repair during meiotic crossing over, to regulate the progression of prophase I, and to enforce metaphase I delay observed at the end of oogenesis.::Drosophila melanogaster (taxid: 7227) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 98.98::7-92 PF02260::FATC 99.82::61-92 GO:0000706::meiotic DNA double-strand break processing confident hh_1w1n_A_1::61-92 confident psy12540 79 P35169::Serine/threonine-protein kinase TOR1 ::Phosphatidylinositol 3-kinase homolog, component of TORC1, which regulates multiple cellular processes to control cell growth in response to environmental signals. Nutrient limitation and environmental stress signals cause inactivation of TORC1. Active TORC1 positively controls ribosome biogenesis via control of rRNA, ribosomal protein and tRNA gene expression, and rRNA processing. TORC1 positively controls protein biosynthesis by regulation of mRNA stability, translation initiation factor activity, and high-affinity amino acid permeases that serve to provide amino acids for use by the translation machinery. TORC1 also promotes growth by sequestering a number of nutrient and general stress-responsive transcription factors in the cytoplasm. TORC1 negatively controls macroautophagy, a process to recycle surplus cytoplasmic mass under nutrient starvation conditions. TORC1 controls many of these processes via TIP41-TAP42-mediated inhibition of the type 2A-related phosphatases PP2A and SIT4.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5032::TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] 97.72::10-78 no hit no match GO:0043234::protein complex confident no hit no match psy8046 214 O95619::YEATS domain-containing protein 4 ::Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage.::Homo sapiens (taxid: 9606) confident COG5033::TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription] 100.00::2-195 PF03366::YEATS 100.00::16-97 GO:0000812::Swr1 complex confident hh_3qrl_A_1::11-80,82-97,110-133 very confident psy5937 201 P42568::Protein AF-9 ::::Homo sapiens (taxid: 9606) confident COG5033::TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription] 99.93::10-109 PF03366::YEATS 99.97::28-108 GO:0005737::cytoplasm confident hh_3rls_A_1::4-133,140-146 very confident psy11123 285 Q6FXM4::Protein AF-9 homolog ::Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) portable COG5033::TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription] 99.93::130-232 PF03366::YEATS 99.98::150-233 GO:0043229::intracellular organelle confident hh_3rls_A_1::126-163,166-182,184-246,252-266 very confident psy11122 212 P53930::Protein AF-9 homolog ::Component of the SWR1 complex which mediates the ATP-dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histones H4 and H2A. The NuA4 complex is also involved in DNA repair. Yaf9 may also be required for viability in conditions in which the structural integrity of the spindle is compromised.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5033::TFG3 Transcription initiation factor IIF, auxiliary subunit [Transcription] 99.94::87-193 PF03366::YEATS 100.00::108-192 GO:0043234::protein complex confident hh_3rls_A_1::82-121,123-123,125-140,142-192 very confident psy11251 190 P58268::Zinc finger protein ubi-d4 ::May be a transcription factor required for the apoptosis response following survival factor withdrawal from myeloid cells. Might also have a role in the development and maturation of lymphoid cells.::Gallus gallus (taxid: 9031) confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 97.86::56-100 PF00628::PHD 99.09::53-100 GO:0005813::centrosome confident hh_2kwj_A_1::7-103 very confident psy14605 139 Q12873::Chromodomain-helicase-DNA-binding protein 3 ::Component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin by deacetylating histones. Required for anchoring centrosomal pericentrin in both interphase and mitosis, for spindle organization and centrosome integrity.::Homo sapiens (taxid: 9606) confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 98.80::9-59 PF00628::PHD 99.02::14-58 GO:0016581::NuRD complex confident hh_2puy_A_1::10-59 very confident psy17723 145 Q9VWF2::Supporter of activation of yellow protein ::Essential transcription regulator during early development. Coactivates transcription of some euchromatin genes and repress transcription in of euchromatin genes translocated to heterochromatin.::Drosophila melanogaster (taxid: 7227) portable COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 98.52::89-135 PF00628::PHD 99.12::89-134 GO:0042393::histone binding confident hh_2ysm_A_1::35-73,77-136 very confident psy16699 231 Q8N806::Putative E3 ubiquitin-protein ligase UBR7 ::E3 ubiquitin-protein ligase which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.::Homo sapiens (taxid: 9606) confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 97.92::118-176 PF02207::zf-UBR 99.12::35-100 GO:0005829::cytosol confident hh_3kv4_A_1::117-129,131-131,136-156,159-182 confident psy5116 422 Q6BER5::Nucleosome-remodeling factor subunit NURF301-like ::Histone-binding component of a NURF-like (nucleosome remodeling factor-like) complex, which would catalyze ATP-dependent nucleosome sliding and facilitate transcription of chromatin (Probable). Involved in vulval cell fates.::Caenorhabditis elegans (taxid: 6239) portable COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 97.40::333-380 PF02791::DDT 99.65::182-241 GO:0006338::chromatin remodeling confident hh_2puy_A_1::331-381 very confident psy5827 410 Q28CA1::Cytochrome c oxidase assembly factor 5 ::Involved in an early step of the mitochondrial complex IV assembly process.::Xenopus tropicalis (taxid: 8364) confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 98.88::253-305 PF10203::Pet191_N 99.93::344-407 GO:0005739::mitochondrion confident hh_1weu_A_1::249-259,261-268,271-294,296-306 very confident psy5823 444 Q28CA1::Cytochrome c oxidase assembly factor 5 ::Involved in an early step of the mitochondrial complex IV assembly process.::Xenopus tropicalis (taxid: 8364) confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 98.85::287-338 PF10203::Pet191_N 99.91::378-441 GO:0005739::mitochondrion confident hh_1weu_A_1::284-293,295-302,305-327,329-340 very confident psy128 446 Q28CA1::Cytochrome c oxidase assembly factor 5 ::Involved in an early step of the mitochondrial complex IV assembly process.::Xenopus tropicalis (taxid: 8364) portable COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 98.78::271-325 PF10203::Pet191_N 99.85::364-430 GO:0005739::mitochondrion confident no hit no match psy12696 267 Q5ZKY4::Inhibitor of growth protein 4 ::Through chromatin acetylation it may function in DNA replication. May inhibit tumor progression by modulating the transcriptional output of signaling pathways which regulate cell proliferation.::Gallus gallus (taxid: 9031) very confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 100.00::3-263 PF12998::ING 99.95::4-106 GO:0005634::nucleus confident no hit no match psy7929 259 Q5ZKY4::Inhibitor of growth protein 4 ::Through chromatin acetylation it may function in DNA replication. May inhibit tumor progression by modulating the transcriptional output of signaling pathways which regulate cell proliferation.::Gallus gallus (taxid: 9031) very confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 100.00::3-259 PF12998::ING 99.95::4-106 GO:0035064::methylated histone residue binding confident no hit no match psy8390 422 Q8VEK6::Inhibitor of growth protein 3 ::Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when directly recruited to sites of DNA damage.::Mus musculus (taxid: 10090) confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 99.97::3-123 PF12998::ING 99.94::2-104 GO:0043968::histone H2A acetylation confident hh_1weu_A_1::332-346,360-387,390-407 very confident psy16463 317 Q9QXV3::Inhibitor of growth protein 1 ::Isoform 1 inhibits p53-dependent transcriptional activation and may function as an oncoprotein. Isoform 2 acts as a negative growth regulator by cooperating with p53 in transcriptional activation of p53-responsive genes and may act as a tumor suppressor.::Mus musculus (taxid: 10090) confident COG5034::TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] 100.00::24-286 PF12998::ING 99.92::28-127 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_4afl_A_1::26-125 very confident psy10865 667 Q8VEK0::Cell cycle control protein 50A ::::Mus musculus (taxid: 10090) confident COG5035::CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms] 100.00::387-666 PF03381::CDC50 100.00::443-666 GO:0005783::endoplasmic reticulum confident hh_2qts_A_1::157-227,234-247,249-283,286-307,324-354,357-374 very confident psy7169 235 Q9Z0U0::Xenotropic and polytropic retrovirus receptor 1 ::May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.::Mus musculus (taxid: 10090) confident COG5036::SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism] 99.25::2-137 PF03105::SPX 99.72::53-107 GO:0004872::receptor activity confident no hit no match psy16587 130 Q6DN14::Multiple C2 and transmembrane domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 97.29::5-71 PF00168::C2 96.16::93-125 GO:0005509::calcium ion binding confident hh_2r83_A_1::7-72,92-119 very confident psy6105 194 Q925C0::Synaptotagmin-9 ::May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.::Rattus norvegicus (taxid: 10116) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.39::69-173 PF00168::C2 99.46::9-138 GO:0005509::calcium ion binding confident hh_1dqv_A_1::6-40,43-173 very confident psy12855 87 Q9BT88::Synaptotagmin-11 ::May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.::Homo sapiens (taxid: 9606) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.05::3-81 PF00168::C2 99.50::3-75 GO:0005509::calcium ion binding confident hh_1w15_A_1::3-80 very confident psy6192 174 Q86UR5::Regulating synaptic membrane exocytosis protein 1 ::Rab effector involved in exocytosis. May act as scaffold protein that regulates neurotransmitter release at the active zone. Essential for maintaining normal probability of neurotransmitter release and for regulating release during short-term synaptic plasticity.::Homo sapiens (taxid: 9606) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.08::4-156 PF00168::C2 98.83::3-56 GO:0005543::phospholipid binding confident hh_2cm5_A_2::2-24,26-62 very confident psy15955 475 O43581::Synaptotagmin-7 ::May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.::Homo sapiens (taxid: 9606) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.70::111-342 PF00168::C2 99.50::118-205 GO:0005544::calcium-dependent phospholipid binding confident hh_2d8k_A_1::98-227 very confident psy8342 225 no hit no match COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.09::109-210 PF00168::C2 99.45::117-199 GO:0005886::plasma membrane confident hh_3b7y_A_1::110-224 very confident psy16205 109 Q15147::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. This form has a role in retina signal transduction.::Homo sapiens (taxid: 9606) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 98.35::12-80 PF00168::C2 98.79::12-61 GO:0016028::rhabdomere confident hh_3qr0_A_1::1-106 very confident psy12137 224 P70610::Double C2-like domain-containing protein beta ::Calcium sensor which positively regulates SNARE-dependent fusion of vesicles with membranes. Binds phospholipids in a calcium-dependent manner and may act at the priming stage of fusion by modifying membrane curvature to stimulate fusion. Involved in calcium-triggered exocytosis in chromaffin cells and calcium-dependent spontaneous release of neurotransmitter in absence of action potentials in neuronal cells. Involved both in glucose-stimulated insulin secretion in pancreatic cells and insulin-dependent GLUT4 transport to the plasma membrane in adipocytes.::Rattus norvegicus (taxid: 10116) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.55::97-205 PF00168::C2 99.60::100-187 GO:0018107::peptidyl-threonine phosphorylation confident hh_3n5a_A_1::84-219 very confident psy16330 101 Q9Y0H4::E3 ubiquitin-protein ligase Su(dx) ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Down-regulates Notch/N signaling pathway, probably by promoting Notch ubiquitination, endocytosis and degradation. Involved in wing growth and leg joint formation.::Drosophila melanogaster (taxid: 7227) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.36::11-100 PF00168::C2 99.67::14-96 GO:0019915::lipid storage confident hh_2nq3_A_1::9-25,29-46,48-100 very confident psy12136 399 P70610::Double C2-like domain-containing protein beta ::Calcium sensor which positively regulates SNARE-dependent fusion of vesicles with membranes. Binds phospholipids in a calcium-dependent manner and may act at the priming stage of fusion by modifying membrane curvature to stimulate fusion. Involved in calcium-triggered exocytosis in chromaffin cells and calcium-dependent spontaneous release of neurotransmitter in absence of action potentials in neuronal cells. Involved both in glucose-stimulated insulin secretion in pancreatic cells and insulin-dependent GLUT4 transport to the plasma membrane in adipocytes.::Rattus norvegicus (taxid: 10116) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.78::125-376 PF00168::C2 99.53::275-362 GO:0030276::clathrin binding confident hh_2cm5_A_1::256-397 very confident psy11037 129 Q9BT88::Synaptotagmin-11 ::May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.::Homo sapiens (taxid: 9606) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.06::43-128 PF00168::C2 99.55::46-128 GO:0030276::clathrin binding confident hh_3n5a_A_1::29-129 very confident psy4890 364 Q2WGJ9::Fer-1-like protein 6 ::::Homo sapiens (taxid: 9606) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 98.93::220-348 PF00168::C2 99.41::222-305 GO:0031410::cytoplasmic vesicle confident hh_3nsj_A_1::219-234,236-254,257-311,315-322,333-343 very confident psy17645 207 P21521::Synaptotagmin 1 ::May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse. It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone.::Drosophila melanogaster (taxid: 7227) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 98.88::38-161 PF00168::C2 99.44::42-141 GO:0031594::neuromuscular junction confident hh_1rsy_A_1::23-97,111-162 very confident psy12096 173 P21521::Synaptotagmin 1 ::May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse. It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone.::Drosophila melanogaster (taxid: 7227) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 98.89::76-155 PF00168::C2 99.16::76-142 GO:0031594::neuromuscular junction confident hh_1rsy_A_1::48-110,112-163 very confident psy12095 128 P21521::Synaptotagmin 1 ::May have a regulatory role in the membrane interactions during trafficking of synaptic vesicles at the active zone of the synapse. It binds acidic phospholipids with a specificity that requires the presence of both an acidic head group and a diacyl backbone.::Drosophila melanogaster (taxid: 7227) very confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.29::8-119 PF00168::C2 99.70::12-99 GO:0031594::neuromuscular junction very confident hh_1rsy_A_1::1-67,69-120 very confident psy3181 349 Q2LGB5::Toll-interacting protein ::Component of the signaling pathway of IL-1 and Toll-like receptors. Inhibits cell activation by microbial products. Recruits IRAK1 to the IL-1 receptor complex. Inhibits IRAK1 phosphorylation and kinase activity.::Bos taurus (taxid: 9913) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.19::25-170 PF00168::C2 99.47::49-130 GO:0033235::positive regulation of protein sumoylation confident hh_1wfj_A_1::39-150,152-152,154-172 very confident psy7073 127 Q9NZM3::Intersectin-2 ::Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles.::Homo sapiens (taxid: 9606) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.36::2-123 PF00168::C2 99.60::1-77 GO:0043231::intracellular membrane-bounded organelle confident hh_3jzy_A_1::1-33,35-87,90-90,93-112,114-121 very confident psy12820 156 Q02158::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.::Dictyostelium discoideum (taxid: 44689) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.33::57-155 PF00168::C2 99.67::60-147 GO:0043234::protein complex confident hh_3ohm_B_1::2-10,12-73,77-135,140-155 very confident psy12482 419 Q80T23::Synaptotagmin-like protein 5 ::May act as Rab effector protein and play a role in vesicle trafficking. Binds phospholipids.::Mus musculus (taxid: 10090) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.95::119-377 PF00168::C2 99.53::124-213 GO:0044446::intracellular organelle part confident hh_3fdw_A_1::104-237 very confident psy3954 268 Q28013::Ras GTPase-activating protein 3 ::Inhibitory regulator of the Ras-cyclic AMP pathway. May bind inositol tetrakisphosphate (IP4).::Bos taurus (taxid: 9913) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.83::50-265 PF00168::C2 99.57::172-255 GO:0044464::cell part confident hh_2r83_A_1::26-39,53-61,63-117,119-264 very confident psy8569 85 Q62768::Protein unc-13 homolog A ::Plays a role in vesicle maturation during exocytosis as a target of the diacylglycerol second messenger pathway. Involved in neurotransmitter release by acting in synaptic vesicle priming prior to vesicle fusion and participates in the activity-dependent refilling of readily releasable vesicle pool (RRP). Essential for synaptic vesicle maturation in most excitatory/glutamatergic but not inhibitory/GABA-mediated synapses. Also involved in secretory granule priming in insulin secretion.::Rattus norvegicus (taxid: 10116) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 95.14::10-63 PF00168::C2 97.89::9-54 GO:0045202::synapse confident hh_2cjs_A_1::8-16,24-75 very confident psy6698 170 Q17RD7::Synaptotagmin-16 ::May be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues. Is Ca(2+)-independent.::Homo sapiens (taxid: 9606) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.18::31-151 PF00168::C2 99.59::46-135 GO:0046982::protein heterodimerization activity confident hh_3n5a_A_1::30-76,78-143,145-168 very confident psy1415 622 Q9BT88::Synaptotagmin-11 ::May be involved in Ca(2+)-dependent exocytosis of secretory vesicles through Ca(2+) and phospholipid binding to the C2 domain or may serve as Ca(2+) sensors in the process of vesicular trafficking and exocytosis.::Homo sapiens (taxid: 9606) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.95::190-612 PF00261::Tropomyosin 99.42::42-137 GO:0005509::calcium ion binding confident hh_2r83_A_1::298-330,332-371,373-388,408-432,451-463,481-594,596-622 very confident psy7848 754 P70610::Double C2-like domain-containing protein beta ::Calcium sensor which positively regulates SNARE-dependent fusion of vesicles with membranes. Binds phospholipids in a calcium-dependent manner and may act at the priming stage of fusion by modifying membrane curvature to stimulate fusion. Involved in calcium-triggered exocytosis in chromaffin cells and calcium-dependent spontaneous release of neurotransmitter in absence of action potentials in neuronal cells. Involved both in glucose-stimulated insulin secretion in pancreatic cells and insulin-dependent GLUT4 transport to the plasma membrane in adipocytes.::Rattus norvegicus (taxid: 10116) portable COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.74::480-725 PF02318::FYVE_2 100.00::86-209 GO:0030672::synaptic vesicle membrane confident hh_1zbd_B_1::81-131,134-146,154-178,180-208,241-251 very confident psy13645 191 Q5SPC5::Otoferlin ::Key calcium ion sensor involved in the Ca(2+)-triggered synaptic vesicle-plasma membrane fusion and in the control of neurotransmitter release at these output synapses.::Danio rerio (taxid: 7955) confident COG5038::Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] 99.20::74-184 PF08151::FerI 99.94::1-69 GO:0005509::calcium ion binding confident hh_1rsy_A_1::74-93,108-189 very confident psy11576 108 P42657::DNA damage checkpoint protein rad25 ::Required for the DNA damage checkpoint that ensures that DNA damage is repaired before mitosis is attempted.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5040::BMH1 14-3-3 family protein [Signal transduction mechanisms] 99.86::13-104 PF00244::14-3-3 99.74::15-105 GO:0005886::plasma membrane confident hh_3uzd_A_1::14-26,31-104 very confident psy11270 98 P29310::14-3-3 protein zeta ::Required in Raf-dependent cell proliferation and photoreceptor differentiation during eye development. Acts upstream of Raf and downstream of Ras, and is essential for viability. Acts as a negative regulator by decreasing its voltage sensitivity. Inhibits yki activity by restricting its nuclear localization.::Drosophila melanogaster (taxid: 7227) confident COG5040::BMH1 14-3-3 family protein [Signal transduction mechanisms] 100.00::1-93 PF00244::14-3-3 100.00::1-85 GO:0019904::protein domain specific binding very confident hh_3uzd_A_1::1-84,87-93 very confident psy5367 201 Q20655::14-3-3-like protein 2 ::Required for extension of life-span by sir-2.1.::Caenorhabditis elegans (taxid: 6239) very confident COG5040::BMH1 14-3-3 family protein [Signal transduction mechanisms] 100.00::6-148 PF00244::14-3-3 100.00::7-148 GO:0019904::protein domain specific binding very confident hh_3uzd_A_1::5-107,113-129,137-148 very confident psy11573 248 P62258::14-3-3 protein epsilon ::Adapter protein implicated in the regulation of a large spectrum of both general and specialized signaling pathways. Binds to a large number of partners, usually by recognition of a phosphoserine or phosphothreonine motif. Binding generally results in the modulation of the activity of the binding partner.::Homo sapiens (taxid: 9606) very confident COG5040::BMH1 14-3-3 family protein [Signal transduction mechanisms] 100.00::15-231 PF00244::14-3-3 100.00::15-232 GO:0035308::negative regulation of protein dephosphorylation very confident bp_3ubw_A_1::32-227 very confident psy5989 220 P29310::14-3-3 protein zeta ::Required in Raf-dependent cell proliferation and photoreceptor differentiation during eye development. Acts upstream of Raf and downstream of Ras, and is essential for viability. Acts as a negative regulator by decreasing its voltage sensitivity. Inhibits yki activity by restricting its nuclear localization.::Drosophila melanogaster (taxid: 7227) portable COG5040::BMH1 14-3-3 family protein [Signal transduction mechanisms] 100.00::35-179 PF00244::14-3-3 99.97::10-181 GO:0043234::protein complex confident hh_3uzd_A_1::46-56,71-83,91-180 very confident psy10861 498 Q91398::Casein kinase II subunit beta ::Participates in Wnt signaling. Plays a complex role in regulating the basal catalytic activity of the alpha subunit.::Danio rerio (taxid: 7955) confident COG5041::SKB2 Casein kinase II, beta subunit [Signal transduction mechanisms / Cell division and chromosome partitioning / Transcription] 100.00::150-451 PF01214::CK_II_beta 100.00::157-437 GO:0005829::cytosol confident hh_1qf8_A_1::151-216,281-360,394-427 very confident psy8812 142 Q80XK6::Autophagy-related protein 2 homolog B ::::Mus musculus (taxid: 10090) confident COG5043::MRS6 Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion] 94.42::26-132 PF09333::ATG_C 97.28::3-38 GO:0006914::autophagy confident no hit no match psy17165 151 Q709C8::Vacuolar protein sorting-associated protein 13C ::::Homo sapiens (taxid: 9606) confident COG5043::MRS6 Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion] 99.75::10-151 PF09333::ATG_C 99.10::97-151 GO:0031045::dense core granule confident no hit no match psy8817 93 Q80XK6::Autophagy-related protein 2 homolog B ::::Mus musculus (taxid: 10090) confident COG5043::MRS6 Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion] 99.55::11-87 PF12624::Chorein_N 99.83::13-88 GO:0006914::autophagy confident no hit no match psy416 157 Q5THJ4::Vacuolar protein sorting-associated protein 13D ::::Homo sapiens (taxid: 9606) confident COG5043::MRS6 Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion] 100.00::1-156 PF12624::Chorein_N 100.00::2-118 GO:0043229::intracellular organelle confident no hit no match psy4290 135 Q07878::Vacuolar protein sorting-associated protein 13 ::Required for sorting signal-dependent recycling of membrane proteins between an endocytic compartment and the TGN.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5043::MRS6 Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion] 99.86::3-92 PF12624::Chorein_N 99.94::11-98 GO:0044444::cytoplasmic part confident no hit no match psy2620 441 O97555::Rab GDP dissociation inhibitor alpha ::Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them.::Canis familiaris (taxid: 9615) very confident COG5044::MRS6 RAB proteins geranylgeranyltransferase component A (RAB escort protein) [Posttranslational modification, protein turnover, chaperones] 100.00::1-434 PF00996::GDI 100.00::1-436 GO:0005829::cytosol very confident hh_1d5t_A_1::1-50,54-63,65-431 very confident psy5978 159 Q9VWG3::40S ribosomal protein S10b ::::Drosophila melanogaster (taxid: 7227) very confident COG5045::Ribosomal protein S10E [Translation, ribosomal structure and biogenesis] 100.00::1-103 PF03501::S10_plectin 100.00::3-96 GO:0022627::cytosolic small ribosomal subunit very confident hh_3u5c_K_1::1-94,96-103 very confident psy1524 592 P63325::40S ribosomal protein S10 ::Component of the 40S ribosomal subunit.::Mus musculus (taxid: 10090) confident COG5045::Ribosomal protein S10E [Translation, ribosomal structure and biogenesis] 99.95::367-455 PF03501::S10_plectin 100.00::367-453 GO:0030336::negative regulation of cell migration confident hh_2nzj_A_1::60-120,176-237,269-281,283-313 very confident psy8033 267 Q9H063::Repressor of RNA polymerase III transcription MAF1 homolog ::Element of the mTORC1 signaling pathway that acts as a mediator of diverse signals and that represses RNA polymerase III transcription. Inhibits the de novo assembly of TFIIIB onto DNA.::Homo sapiens (taxid: 9606) confident COG5046::MAF1 Protein involved in Mod5 protein sorting [Posttranslational modification, protein turnover, chaperones] 99.90::32-262 PF09174::Maf1 100.00::20-254 GO:0005829::cytosol confident hh_3nr5_A_1::2-31,60-61,79-79,97-107,111-117,119-129,167-257 very confident psy13068 950 A3GFA2::Protein transport protein SEC23 ::Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules.::Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (taxid: 322104) portable COG5047::SEC23 Vesicle coat complex COPII, subunit SEC23 [Intracellular trafficking and secretion] 100.00::201-949 PF04811::Sec23_trunk 99.95::552-730 GO:0008270::zinc ion binding confident hh_1m2o_A_1::201-301,304-319,327-330,336-366,370-384,457-476,479-484,491-497,499-502,530-530,532-536,549-564,568-577,579-583,591-601,604-627,635-646,656-718,721-782,786-949 very confident psy17260 679 Q15436::Protein transport protein Sec23A ::Component of the COPII coat, that covers ER-derived vesicles involved in transport from the endoplasmic reticulum to the Golgi apparatus. COPII acts in the cytoplasm to promote the transport of secretory, plasma membrane, and vacuolar proteins from the endoplasmic reticulum to the Golgi complex.::Homo sapiens (taxid: 9606) confident COG5047::SEC23 Vesicle coat complex COPII, subunit SEC23 [Intracellular trafficking and secretion] 100.00::187-678 PF04811::Sec23_trunk 99.93::302-504 GO:0012507::ER to Golgi transport vesicle membrane confident hh_1m2o_A_1::186-287,290-390,399-472,474-602,605-678 very confident psy16259 896 P51523::Zinc finger protein 84 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5048::FOG: Zn-finger [General function prediction only] 97.72::380-434 PF01352::KRAB 99.10::199-244 GO:0005730::nucleolus confident hh_2i13_A_1::619-770,777-808 very confident psy1016 718 Q9VM71::5'-3' exoribonuclease 2 homolog ::Possesses 5'->3' exoribonuclease activity. May promote the termination of transcription by RNA polymerase II.::Drosophila melanogaster (taxid: 7227) confident COG5049::XRN1 5'-3' exonuclease [DNA replication, recombination, and repair / Cell division and chromosome partitioning / Translation] 100.00::1-718 PF03159::XRN_N 100.00::1-256 GO:0000738::DNA catabolic process, exonucleolytic confident hh_3fqd_A_1::1-260,268-488,490-497,573-583,593-594,626-628,632-635,662-718 very confident psy6081 226 Q9VM71::5'-3' exoribonuclease 2 homolog ::Possesses 5'->3' exoribonuclease activity. May promote the termination of transcription by RNA polymerase II.::Drosophila melanogaster (taxid: 7227) confident COG5049::XRN1 5'-3' exonuclease [DNA replication, recombination, and repair / Cell division and chromosome partitioning / Translation] 100.00::17-226 PF03159::XRN_N 100.00::52-226 GO:0005829::cytosol confident hh_2y35_A_1::51-119,139-153,161-170,176-226 very confident psy14280 1891 P97789::5'-3' exoribonuclease 1 ::Major 5'-3' exoribonuclease involved in mRNA decay. Required for the 5'-3'-processing of the G4 tetraplex-containing DNA and RNA substrates. The kinetic of hydrolysis is faster for G4 RNA tetraplex than for G4 DNA tetraplex and monomeric RNA tetraplex. Binds to RNA and DNA. Plays a role in replication-dependent histone mRNA degradation.::Mus musculus (taxid: 10090) portable COG5049::XRN1 5'-3' exonuclease [DNA replication, recombination, and repair / Cell division and chromosome partitioning / Translation] 100.00::1-935 PF03159::XRN_N 100.00::1-298 GO:0043232::intracellular non-membrane-bounded organelle confident hh_2y35_A_1::1-112,174-183,185-224,234-307,313-340,344-476,491-520,522-714,716-723,725-811,815-815,821-1026,1029-1148,1150-1224 very confident psy16188 395 Q17QM4::Ethanolaminephosphotransferase 1 ::Catalyzes phosphatidylethanolamine biosynthesis from CDP-ethanolamine. It thereby plays a central role in the formation and maintenance of vesicular membranes. Involved in the foramtion of phosphatidylethanolamine via 'Kennedy' pathway.::Bos taurus (taxid: 9913) confident COG5050::EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases [Lipid metabolism] 100.00::10-394 PF01066::CDP-OH_P_transf 99.64::52-145 GO:0005794::Golgi apparatus confident no hit no match psy2278 413 Q8BGS7::Choline/ethanolaminephosphotransferase 1 ::Catalyzes both phosphatidylcholine and phosphatidylethanolamine biosynthesis from CDP-choline and CDP-ethanolamine, respectively. Involved in protein-dependent process of phospholipid transport to distribute phosphatidyl choline to the lumenal surface. Has a higher cholinephosphotransferase activity than ethanolaminephosphotransferase activity.::Mus musculus (taxid: 10090) confident COG5050::EPT1 sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases [Lipid metabolism] 100.00::20-384 PF01066::CDP-OH_P_transf 99.65::60-145 GO:0006663::platelet activating factor biosynthetic process confident no hit no match psy2535 115 P49630::60S ribosomal protein L36 ::::Drosophila melanogaster (taxid: 7227) very confident COG5051::RPL36A Ribosomal protein L36E [Translation, ribosomal structure and biogenesis] 100.00::1-108 PF01158::Ribosomal_L36e 100.00::3-112 GO:0005811::lipid particle very confident hh_4a18_Q_1::4-22,35-111 very confident psy9086 115 P49630::60S ribosomal protein L36 ::::Drosophila melanogaster (taxid: 7227) very confident COG5051::RPL36A Ribosomal protein L36E [Translation, ribosomal structure and biogenesis] 100.00::1-108 PF01158::Ribosomal_L36e 100.00::3-112 GO:0005811::lipid particle very confident hh_4a18_Q_1::4-22,35-111 very confident psy1718 142 Q6Q415::60S ribosomal protein L36 ::::Danio rerio (taxid: 7955) confident COG5051::RPL36A Ribosomal protein L36E [Translation, ribosomal structure and biogenesis] 99.85::1-62 PF01158::Ribosomal_L36e 99.97::1-61 GO:0022625::cytosolic large ribosomal subunit confident hh_4a18_Q_1::1-60 very confident psy2332 204 Q4KMI4::Receptor expression-enhancing protein 2 ::May enhance the cell surface expression of odorant receptors.::Danio rerio (taxid: 7955) confident COG5052::YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion] 99.85::9-112 PF03134::TB2_DP1_HVA22 99.97::4-98 GO:0008017::microtubule binding confident no hit no match psy7286 204 no hit no match COG5052::YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion] 99.85::9-113 PF03134::TB2_DP1_HVA22 99.97::4-98 GO:0008017::microtubule binding confident no hit no match psy15140 227 Q00765::Receptor expression-enhancing protein 5 ::May promote functional cell surface expression of olfactory receptors.::Homo sapiens (taxid: 9606) confident COG5052::YOP1 Protein involved in membrane traffic [Intracellular trafficking and secretion] 99.96::49-221 PF03134::TB2_DP1_HVA22 99.96::98-192 GO:0016043::cellular component organization confident no hit no match psy8922 483 P63073::Eukaryotic translation initiation factor 4E ::Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. May play an important role in spermatogenesis through translational regulation of stage-specific mRNAs during germ cell development (By similarity). Its translation stimulation activity is repressed by binding to the complex CYFIP1-FMR1. Component of the CYFIP1-EIF4E-FMR1 complex which binds to the mRNA cap and mediates translational repression. In the CYFIP1-EIF4E-FMR1 complex this subunit mediates the binding to the mRNA cap.::Mus musculus (taxid: 10090) confident COG5053::CDC33 Translation initiation factor 4E (eIF-4E) [Translation, ribosomal structure and biogenesis] 100.00::291-469 PF01652::IF4E 100.00::302-466 GO:0000340::RNA 7-methylguanosine cap binding confident hh_1ipb_A_1::296-434,437-483 very confident psy8925 80 P63073::Eukaryotic translation initiation factor 4E ::Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures. May play an important role in spermatogenesis through translational regulation of stage-specific mRNAs during germ cell development (By similarity). Its translation stimulation activity is repressed by binding to the complex CYFIP1-FMR1. Component of the CYFIP1-EIF4E-FMR1 complex which binds to the mRNA cap and mediates translational repression. In the CYFIP1-EIF4E-FMR1 complex this subunit mediates the binding to the mRNA cap.::Mus musculus (taxid: 10090) confident COG5053::CDC33 Translation initiation factor 4E (eIF-4E) [Translation, ribosomal structure and biogenesis] 98.83::37-80 PF01652::IF4E 99.13::44-80 GO:0000340::RNA 7-methylguanosine cap binding confident hh_1ap8_A_1::37-80 very confident psy10850 173 O60573::Eukaryotic translation initiation factor 4E type 2 ::Recognizes and binds the 7-methylguanosine-containing mRNA cap during an early step in the initiation of protein synthesis and facilitates ribosome binding by inducing the unwinding of the mRNAs secondary structures.::Homo sapiens (taxid: 9606) confident COG5053::CDC33 Translation initiation factor 4E (eIF-4E) [Translation, ribosomal structure and biogenesis] 100.00::32-172 PF01652::IF4E 100.00::36-171 GO:0005829::cytosol confident hh_2jgb_A_1::29-171 very confident psy513 129 P27882::Mitochondrial FAD-linked sulfhydryl oxidase ERV1 ::FAD-dependent sulfhydryl oxidase that catalyzes disulfide bond formation. Required for the import and folding of small cysteine-containing proteins in the mitochondrial intermembrane space (IMS). Forms a redox cycle with MIA40 that involves a disulfide relay system. Important for maintaining the cysteine residues in MIA40 in an oxidized state. Reduced ERV1 is reoxidized by cytochrome c. Required for the maturation of cytoplasmic, but not of mitochondrial Fe/S proteins.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5054::ERV1 Mitochondrial sulfhydryl oxidase involved in the biogenesis of cytosolic Fe/S proteins [Posttranslational modification, protein turnover, chaperones] 100.00::4-127 PF04777::Evr1_Alr 100.00::30-123 GO:0005739::mitochondrion confident hh_2hj3_A_1::17-129 very confident psy13140 122 Q8GXX0::FAD-linked sulfhydryl oxidase ERV1 ::FAD-dependent sulfhydryl oxidase that catalyzes disulfide bond formation. Oxidizes thioredoxin in vitro.::Arabidopsis thaliana (taxid: 3702) confident COG5054::ERV1 Mitochondrial sulfhydryl oxidase involved in the biogenesis of cytosolic Fe/S proteins [Posttranslational modification, protein turnover, chaperones] 100.00::9-118 PF04777::Evr1_Alr 100.00::21-114 GO:0005739::mitochondrion confident hh_2hj3_A_1::8-122 very confident psy8321 124 no hit no match COG5054::ERV1 Mitochondrial sulfhydryl oxidase involved in the biogenesis of cytosolic Fe/S proteins [Posttranslational modification, protein turnover, chaperones] 100.00::10-119 PF04777::Evr1_Alr 100.00::22-115 GO:0042803::protein homodimerization activity confident hh_2hj3_A_1::9-124 very confident psy2984 228 Q55BH9::Diacylglycerol O-acyltransferase 1 ::Catalyzes the terminal and only committed step in triacylglycerol synthesis by using diacylglycerol and fatty acyl CoA as substrates.::Dictyostelium discoideum (taxid: 44689) portable COG5056::ARE1 Acyl-CoA cholesterol acyltransferase [Lipid metabolism] 99.96::66-209 PF03062::MBOAT 99.02::117-209 GO:0010888::negative regulation of lipid storage confident hh_3l6a_A_1::1-28,39-78 portable psy2985 76 Q9ERM3::Diacylglycerol O-acyltransferase 1 ::Catalyzes the terminal and only committed step in triacylglycerol synthesis by using diacylglycerol and fatty acyl CoA as substrates. In contrast to DGAT2 it is not essential for survival. May be involved in VLDL (very low density lipoprotein) assembly.::Rattus norvegicus (taxid: 10116) confident COG5056::ARE1 Acyl-CoA cholesterol acyltransferase [Lipid metabolism] 99.96::9-76 PF03062::MBOAT 99.37::21-76 GO:0010888::negative regulation of lipid storage confident no hit no match psy16836 319 P58389::Serine/threonine-protein phosphatase 2A activator ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Acts as a regulatory subunit for serine/threonine-protein phosphatase 2A (PP2A) modulating its activity or substrate specificity, probably by inducing a conformational change in the catalytic subunit, a proposed direct target of the PPIase. Can reactivate inactive phosphatase PP2A-phosphatase methylesterase complexes (PP2A(i)) in presence of ATP and Mg(2+). Reversibly stimulates the variable phosphotyrosyl phosphatase activity of PP2A core heterodimer PP2A(D) in presence of ATP and Mg(2+) (in vitro). The phosphotyrosyl phosphatase activity is dependent of an ATPase activty of the PP2A(D):PPP2R4 complex. Is involved in apoptosis; the function appears to be independent from PP2A.::Mus musculus (taxid: 10090) very confident COG5057::LAG1 Phosphotyrosyl phosphatase activator [Cell division and chromosome partitioning / Signal transduction mechanisms] 100.00::24-317 PF03095::PTPA 100.00::29-317 GO:0005730::nucleolus very confident hh_2ixm_A_1::25-234,236-317 very confident psy2627 309 Q55CJ3::Probable serine/threonine-protein phosphatase 2A activator 1 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Acts as a regulatory subunit for PP2A-like phosphatases modulating their activity or substrate specificity, probably by inducing a conformational change in the catalytic subunit, a direct target of the PPIase.::Dictyostelium discoideum (taxid: 44689) confident COG5057::LAG1 Phosphotyrosyl phosphatase activator [Cell division and chromosome partitioning / Signal transduction mechanisms] 100.00::1-273 PF03095::PTPA 100.00::1-270 GO:0005730::nucleolus very confident hh_2ixm_A_1::1-177,188-195,197-199,202-271 very confident psy6756 1055 G5ED45::Ceramide synthase hyl-1 ::Catalyzes the acylation of sphingosine to form ceramides. Exhibits substrate preference for fatty acyl-coA chains containing 24 and 26 carbons.::Caenorhabditis elegans (taxid: 6239) portable COG5058::LAG1 Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor [Intracellular trafficking and secretion] 100.00::795-1042 PF03798::TRAM_LAG1_CLN8 99.82::834-990 GO:0050291::sphingosine N-acyltransferase activity confident hh_2rpc_A_1::586-620,640-691,703-722 very confident psy17370 262 Q15058::Kinesin-like protein KIF14 ::Plays an essential role in cytokinesis.::Homo sapiens (taxid: 9606) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.94::97-262 PF00225::Kinesin 100.00::105-262 GO:0005634::nucleus confident hh_1x88_A_1::96-262 very confident psy5719 378 Q8J1G4::Kinesin-like protein KIP1 ::Required for assembly of the mitotic spindle. Interact with spindle microtubules to produce an outwardly directed force acting upon the poles. Following spindle assembly, CIN8 and KIP1 apparently act to oppose a force that draws separated poles back together. This force seems to be mediate by KAR3.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::49-366 PF00225::Kinesin 100.00::78-367 GO:0005635::nuclear envelope confident hh_1bg2_A_1::80-138,177-241,248-292,294-313,319-326,329-354,357-367 very confident psy12526 103 Q9H1H9::Kinesin-like protein KIF13A ::Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis.::Homo sapiens (taxid: 9606) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.80::35-103 PF00225::Kinesin 99.87::33-103 GO:0005769::early endosome confident hh_2owm_A_1::34-103 very confident psy4062 409 Q4KLL9::Kinesin-like protein KIF18B ::May play an important role in regulating cell division.::Rattus norvegicus (taxid: 10116) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::133-361 PF00225::Kinesin 100.00::78-353 GO:0005874::microtubule confident hh_3lre_A_1::70-114,116-201,204-353 very confident psy5722 86 P17210::Kinesin heavy chain ::Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Milt and Miro form an essential protein complex that links Khc to mitochondria for light chain-independent, anterograde transport of mitochondria.::Drosophila melanogaster (taxid: 7227) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 98.52::15-84 PF00225::Kinesin 99.16::22-84 GO:0005875::microtubule associated complex confident hh_1bg2_A_1::9-44,48-84 very confident psy15556 288 B1AVY7::Kinesin-like protein KIF16B ::Plus end-directed microtubule-dependent motor protein involved in endosome transport and receptor recycling and degradation. Regulates the plus end motility of early endosomes and the balance between recycling and degradation of receptors such as EGF receptor (EGFR) and FGF receptor (FGFR). Regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development.::Mus musculus (taxid: 10090) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.97::2-152 PF00225::Kinesin 100.00::2-144 GO:0005876::spindle microtubule confident hh_3gbj_A_1::2-28,31-143 very confident psy7272 275 O88658::Kinesin-like protein KIF1B ::Isoform 1 mediates the transport of synaptic vesicles in neuronal cells.::Rattus norvegicus (taxid: 10116) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.81::37-214 PF00225::Kinesin 99.83::38-175 GO:0005876::spindle microtubule confident hh_4egx_A_1::18-79,140-175,179-254 very confident psy9445 243 P17120::Kinesin-like protein bimC ::Important role in mitotic dividing cells. Microtubule motor required for spindle body separation.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.93::119-235 PF00225::Kinesin 100.00::83-243 GO:0005876::spindle microtubule confident hh_1x88_A_1::79-205,207-243 very confident psy7232 222 P46873::Osmotic avoidance abnormal protein 3 ::May have a role during neurogenesis and axonal transport.::Caenorhabditis elegans (taxid: 6239) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::7-205 PF00225::Kinesin 100.00::8-197 GO:0005876::spindle microtubule confident hh_2vvg_A_1::6-143,145-210 very confident psy7619 102 Q61771::Kinesin-like protein KIF3B ::Involved in tethering the chromosomes to the spindle pole and in chromosome movement. Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro.::Mus musculus (taxid: 10090) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.67::56-102 PF00225::Kinesin 99.88::13-102 GO:0005876::spindle microtubule confident hh_3b6u_A_1::2-47,52-102 very confident psy9448 583 Q6P9P6::Kinesin-like protein KIF11 ::Motor protein required for establishing a bipolar spindle. Blocking of KIF11 prevents centrosome migration and arrest cells in mitosis with monoastral microtubule arrays.::Mus musculus (taxid: 10090) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::13-494 PF00225::Kinesin 100.00::13-309 GO:0005876::spindle microtubule confident hh_1x88_A_1::13-99,101-318 very confident psy9852 241 Q7TNC6::Kinesin-like protein KIF26B ::Essential for embryonic kidney development. Plays an important role in the compact adhesion between mesenchymal cells adjacent to the ureteric buds, possibly by interacting with MYH10. This could lead to the establishment of the basolateral integrity of the mesenchyme and the polarized expression of ITGA8, which maintains the GDNF expression required for further ureteric bud attraction.::Mus musculus (taxid: 10090) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::1-229 PF00225::Kinesin 100.00::1-228 GO:0005876::spindle microtubule confident hh_2vvg_A_1::1-55,59-78,81-95,98-107,109-176,189-207,213-229 very confident psy12523 544 Q9EQW7::Kinesin-like protein KIF13A ::Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis (By similarity). Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex.::Mus musculus (taxid: 10090) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::86-504 PF00225::Kinesin 100.00::122-496 GO:0005876::spindle microtubule confident hh_3gbj_A_1::122-170,175-270,333-395,397-413,457-496 very confident psy16994 932 Q9V877::Kinesin-like protein subito ::Required during female meiosis for bipolar spindle formation in the absence of the centrosomes and chromosome homolog segregation. Also has roles in male meiosis and mitotic divisions of the early embryo.::Drosophila melanogaster (taxid: 7227) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::102-331 PF00225::Kinesin 100.00::61-323 GO:0005876::spindle microtubule confident hh_3bfn_A_1::47-56,61-93,99-262,270-291,293-334 very confident psy2748 690 Q6S000::Kinesin-related protein 12 ::Microtubule-associated force-producing protein that plays a role in organelle transport. Its motor activity is directed toward the microtubule's plus end (By similarity). Required for cytokinesis. May be involved in a vesicle-mediated transport of myosin II, the Aurora kinase (aurK) and other proteins along mitotic extracellular microtubules toward the center of the cell and the cleavage furrow in order to ensure cell division coupled to mitosis.::Dictyostelium discoideum (taxid: 44689) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::17-367 PF00225::Kinesin 100.00::65-359 GO:0005929::cilium confident hh_3vhx_B_1::532-547,554-564,568-577,579-590,592-594,597-621,627-657 very confident psy11231 172 P28741::Kinesin-like protein KIF3A ::Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro. Plays a role in primary cilia formation.::Mus musculus (taxid: 10090) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.95::2-111 PF00225::Kinesin 99.96::2-103 GO:0005932::microtubule basal body confident hh_1x88_A_1::2-49,51-111 very confident psy2777 108 Q9P2E2::Kinesin-like protein KIF17 ::Transports vesicles containing N-methyl-D-aspartate (NMDA) receptor 2B along microtubules.::Homo sapiens (taxid: 9606) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.44::20-108 PF00225::Kinesin 99.44::18-108 GO:0005932::microtubule basal body confident hh_2vvg_A_1::2-57,60-108 very confident psy23 386 Q960Z0::Kinesin-like protein Klp10A ::Required during anaphase to drive sister chromatid separation to promote flux by actively depolymerizing kinetochore microtubules at their pole-associated minus ends, thereby moving chromatids through a "poleward flux".::Drosophila melanogaster (taxid: 7227) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::74-347 PF00225::Kinesin 100.00::71-339 GO:0007019::microtubule depolymerization confident hh_2heh_A_1::74-342 very confident psy5721 290 P17210::Kinesin heavy chain ::Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Milt and Miro form an essential protein complex that links Khc to mitochondria for light chain-independent, anterograde transport of mitochondria.::Drosophila melanogaster (taxid: 7227) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.79::1-106 PF00225::Kinesin 99.80::1-74 GO:0016043::cellular component organization confident hh_3kin_B_1::3-119 very confident psy5718 720 P17210::Kinesin heavy chain ::Kinesin is a microtubule-associated force-producing protein that may play a role in organelle transport. Milt and Miro form an essential protein complex that links Khc to mitochondria for light chain-independent, anterograde transport of mitochondria.::Drosophila melanogaster (taxid: 7227) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::14-300 PF00225::Kinesin 100.00::22-270 GO:0016043::cellular component organization confident hh_1bg2_A_1::9-45,49-270 very confident psy7226 279 Q6ZMV9::Kinesin-like protein KIF6 ::::Homo sapiens (taxid: 9606) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::25-251 PF00225::Kinesin 100.00::19-251 GO:0016887::ATPase activity confident no hit no match psy7270 459 no hit no match COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::48-344 PF00225::Kinesin 100.00::9-336 GO:0016887::ATPase activity confident hh_2zfi_A_1::1-41,45-112,114-345 very confident psy15017 97 P17120::Kinesin-like protein bimC ::Important role in mitotic dividing cells. Microtubule motor required for spindle body separation.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.75::34-95 PF00225::Kinesin 99.92::3-94 GO:0019886::antigen processing and presentation of exogenous peptide antigen via MHC class II confident hh_1bg2_A_1::1-24,26-31,33-93 very confident psy8840 355 Q61771::Kinesin-like protein KIF3B ::Involved in tethering the chromosomes to the spindle pole and in chromosome movement. Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro.::Mus musculus (taxid: 10090) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::2-249 PF00225::Kinesin 100.00::2-241 GO:0019886::antigen processing and presentation of exogenous peptide antigen via MHC class II confident hh_3b6u_A_1::2-133,135-260 very confident psy16999 154 O95235::Kinesin-like protein KIF20A ::Mitotic kinesin required for chromosome passenger complex (CPC)-mediated cytokinesis. Following phosphorylation by PLK1, involved in recruitment of PLK1 to the central spindle. Interacts with guanosine triphosphate (GTP)-bound forms of RAB6A and RAB6B. May act as a motor required for the retrograde RAB6 regulated transport of Golgi membranes and associated vesicles along microtubules. Has a microtubule plus end-directed motility.::Homo sapiens (taxid: 9606) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.97::7-148 PF00225::Kinesin 100.00::5-145 GO:0031090::organelle membrane confident hh_3bfn_A_1::6-27,30-83,91-112,114-135,137-144,147-152 very confident psy17371 237 Q9H1H9::Kinesin-like protein KIF13A ::Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis.::Homo sapiens (taxid: 9606) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::5-237 PF00225::Kinesin 100.00::7-237 GO:0031090::organelle membrane confident hh_2owm_A_1::6-47,54-237 very confident psy12524 151 Q9H1H9::Kinesin-like protein KIF13A ::Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis.::Homo sapiens (taxid: 9606) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.97::3-150 PF00225::Kinesin 100.00::2-150 GO:0042803::protein homodimerization activity confident hh_3gbj_A_1::2-150 very confident psy15014 286 Q9QXL1::Kinesin-like protein KIF21B ::Microtubule-binding motor protein probably involved in neuronal dendritic transport. In vitro, has a plus-end directed motor activity.::Mus musculus (taxid: 10090) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.96::1-283 PF00225::Kinesin 100.00::1-282 GO:0043229::intracellular organelle confident hh_2vvg_A_1::1-14,21-43,52-75,180-180,190-258,262-282 very confident psy7618 560 P82266::Probable 125 kDa kinesin-related protein ::Responsible for microtubule translocation. May be important for the organization of phragmoplast-specific arrays of microtubules.::Arabidopsis thaliana (taxid: 3702) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::25-493 PF00225::Kinesin 100.00::37-485 GO:0044428::nuclear part confident hh_1x88_A_1::27-70,75-156,158-162,220-243,248-249,295-299,315-493 very confident psy11229 705 P28741::Kinesin-like protein KIF3A ::Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro. Plays a role in primary cilia formation.::Mus musculus (taxid: 10090) very confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::96-417 PF00225::Kinesin 100.00::23-409 GO:0044782::cilium organization confident hh_3b6u_A_1::12-56,91-175,177-206,220-288,303-428 very confident psy17366 91 Q9NQT8::Kinesin-like protein KIF13B ::Involved in reorganization of the cortical cytoskeleton. Regulates axon formation by promoting the formation of extra axons. May be functionally important for the intracellular trafficking of MAGUKs and associated protein complexes.::Homo sapiens (taxid: 9606) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 99.46::3-60 PF00225::Kinesin 99.55::3-52 GO:0050770::regulation of axonogenesis confident hh_3gbj_A_1::3-12,15-51 very confident psy37 279 B1AVY7::Kinesin-like protein KIF16B ::Plus end-directed microtubule-dependent motor protein involved in endosome transport and receptor recycling and degradation. Regulates the plus end motility of early endosomes and the balance between recycling and degradation of receptors such as EGF receptor (EGFR) and FGF receptor (FGFR). Regulates the Golgi to endosome transport of FGFR-containing vesicles during early development, a key process for developing basement membrane and epiblast and primitive endoderm lineages during early postimplantation development.::Mus musculus (taxid: 10090) confident COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::17-256 PF00225::Kinesin 100.00::18-248 GO:0080025::phosphatidylinositol-3,5-bisphosphate binding confident hh_2vvg_A_1::18-86,88-96,111-189,194-261 very confident psy3920 153 O59751::Kinesin-like protein 6 ::Has a role in establishing metaphase during mitosis. Required for chromosome segregation where it generates tension during kinetochore capturing.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 100.00::1-152 PF00225::Kinesin 100.00::1-150 GO:0097149::centralspindlin complex confident hh_2owm_A_1::1-30,36-60,62-129,132-141,143-152 very confident psy18194 157 P46873::Osmotic avoidance abnormal protein 3 ::May have a role during neurogenesis and axonal transport.::Caenorhabditis elegans (taxid: 6239) portable COG5059::KIP1 Kinesin-like protein [Cytoskeleton] 98.15::1-36 no hit no match GO:0005871::kinesin complex confident hh_3bfn_A_1::1-44,49-60 confident psy15047 165 Q9C9N3::Zinc finger CCCH domain-containing protein 14 ::::Arabidopsis thaliana (taxid: 3702) confident COG5063::CTH1 CCCH-type Zn-finger protein [General function prediction only] 99.27::32-127 PF00642::zf-CCCH 98.78::59-84 GO:0003729::mRNA binding confident hh_1m9o_A_1::55-125 very confident psy15067 80 Q9C9N3::Zinc finger CCCH domain-containing protein 14 ::::Arabidopsis thaliana (taxid: 3702) confident COG5063::CTH1 CCCH-type Zn-finger protein [General function prediction only] 99.31::6-74 PF00642::zf-CCCH 99.04::6-31 GO:0005634::nucleus confident hh_1m9o_A_1::3-72 very confident psy3120 711 Q86B79::RING finger protein unkempt ::Essential for late larval/early pupal development.::Drosophila melanogaster (taxid: 7227) confident COG5063::CTH1 CCCH-type Zn-finger protein [General function prediction only] 99.50::210-441 PF00642::zf-CCCH 97.96::410-436 GO:0005737::cytoplasm confident hh_1m9o_A_2::330-378,385-402 confident psy4482 133 P47974::Zinc finger protein 36, C3H1 type-like 2 ::Probable regulatory protein involved in regulating the response to growth factors. RNA-binding protein that binds to 5'UUAUUUAUUU-3' core sequence. Binds to the class II AU-rich element (ARE) in the 3'-UTR of target mRNAs and promotes their deadenylation and degradation.::Homo sapiens (taxid: 9606) portable COG5063::CTH1 CCCH-type Zn-finger protein [General function prediction only] 99.21::10-119 PF00642::zf-CCCH 98.95::17-42 GO:0005829::cytosol confident hh_1m9o_A_1::9-48,50-84 very confident psy10639 189 P17431::Zinc finger protein 36, C3H1 type-like 1 ::Probable regulatory protein involved in regulating the response to growth factors.::Rattus norvegicus (taxid: 10116) portable COG5063::CTH1 CCCH-type Zn-finger protein [General function prediction only] 99.24::6-114 PF00642::zf-CCCH 98.66::51-76 GO:0010468::regulation of gene expression confident hh_1m9o_A_1::46-115 very confident psy1198 249 F1LP64::E3 ubiquitin-protein ligase TRIP12 ::E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardeless of the presence of lysine residues in target proteins. In normal cells, mediates ubiquitination and degradation of isoform p19ARF/ARF of CDKN2A, a lysine-less tumor suppressor required for p53/TP53 activation under oncogenic stress. In cancer cells, however, isoform p19ARF/ARF and TRIP12 are located in different cell compartments, preventing isoform p19ARF/ARF ubiquitination and degradation. Does not mediate ubiquitination of isoform p16-INK4a of CDKN2A. Also catalyzes ubiquitination of NAE1 and SMARCE1, leading to their degradation. Ubiquitination and degradation of target proteins is regulated by interaction with proteins such as MYC, TRADD or SMARCC1, which disrupt the interaction between TRIP12 and target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spreading of ubiquitinated chromatin at damaged chromosomes.::Rattus norvegicus (taxid: 10116) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 99.97::94-243 PF00514::Arm 98.41::200-239 GO:0005654::nucleoplasm confident no hit no match psy10739 187 O94374::Importin subunit alpha-2 ::Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. Active directional transport is assured by both, a Phe-Gly (FG) repeat affinity gradient for these transport factors across the NPC and a transport cofactor concentration gradient across the nuclear envelope. Involved in nuclear protein import. Required for efficient nuclera import of both an SV40 nuclear localization signal-containing reporter protein and the pap1 component of the stress response MAP kinase pathway. Required for proper mitotic progression.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 99.96::63-187 PF01749::IBB 99.87::65-158 GO:0005829::cytosol confident hh_4db8_A_1::2-68,70-72,103-107,134-164,166-187 very confident psy15604 986 Q0VCX4::Catenin beta-1 ::Key downstream component of the canonical Wnt signaling pathway. In the absence of Wnt, forms a complex with AXIN1, AXIN2, APC, CSNK1A1 and GSK3B that promotes phosphorylation on N-terminal Ser and Thr residues and ubiquitination of CTNNB1 via BTRC and its subsequent degradation by the proteasome. In the presence of Wnt ligand, CTNNB1 is not ubiquitinated and accumulates in the nucleus, where it acts as a coactivator for transcription factors of the TCF/LEF family, leading to activate Wnt responsive genes. Involved in the regulation of cell adhesion. Acts as a negative regulator of centrosome cohesion. Involved in the CDK2/PTPN6/CTNNB1/CEACAM1 pathway of insulin internalization. Blocks anoikis of malignant kidney and intestinal epithelial cells and promotes their anchorage-independent growth by down-regulating DAPK2.::Bos taurus (taxid: 9913) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::494-890 PF05804::KAP 99.95::166-650 GO:0003690::double-stranded DNA binding confident hh_2z6h_A_1::116-414,506-532,534-607,618-620,631-649,651-674,676-755 very confident psy15592 294 O35927::Catenin delta-2 ::May be involved in neuronal cell adhesion and tissue morphogenesis and integrity by regulating adhesion molecules. Functions as a transcriptional activator when bound to ZBTB33.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 99.88::12-254 PF05804::KAP 99.76::10-254 GO:0005634::nucleus confident hh_3l6x_A_1::26-106,108-162,164-254,256-262 very confident psy9169 440 O35344::Importin subunit alpha-3 ::Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical NLS.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::1-439 PF05804::KAP 99.89::73-415 GO:0005829::cytosol confident hh_2jdq_A_1::75-418 very confident psy664 379 O60684::Importin subunit alpha-7 ::Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus.::Homo sapiens (taxid: 9606) very confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::1-358 PF05804::KAP 99.90::1-333 GO:0005829::cytosol very confident hh_2jdq_A_1::2-336 very confident psy10729 363 O94374::Importin subunit alpha-2 ::Functions as a component of the nuclear pore complex (NPC). NPC components, collectively referred to as nucleoporins (NUPs), can play the role of both NPC structural components and of docking or interaction partners for transiently associated nuclear transport factors. Active directional transport is assured by both, a Phe-Gly (FG) repeat affinity gradient for these transport factors across the NPC and a transport cofactor concentration gradient across the nuclear envelope. Involved in nuclear protein import. Required for efficient nuclera import of both an SV40 nuclear localization signal-containing reporter protein and the pap1 component of the stress response MAP kinase pathway. Required for proper mitotic progression.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::2-362 PF05804::KAP 99.91::4-352 GO:0005829::cytosol confident hh_2jdq_A_1::2-341 very confident psy12605 845 O35344::Importin subunit alpha-3 ::Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical NLS.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::1-837 PF05804::KAP 99.93::89-809 GO:0009411::response to UV confident hh_2jdq_A_1::46-50,52-231,257-379,385-467,469-487 very confident psy12594 542 Q9JLI7::Sperm-associated antigen 6 ::Important for structural integrity of the central apparatus in the sperm tail and for flagellar motility.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::85-482 PF05804::KAP 99.96::15-504 GO:0015630::microtubule cytoskeleton confident hh_4db8_A_1::125-346,348-364 very confident psy4705 164 Q9H3U1::Protein unc-45 homolog A ::Acts as co-chaperone for HSP90. Prevents the stimulation of HSP90AB1 ATPase activity by AHSA1. Positive factor in promoting PGR function in the cell. May be necessary for proper folding of myosin (Potential). Necessary for normal cell proliferation. Necessary for normal myotube formation and myosin accumulation during muscle cell development. May play a role in erythropoiesis in stroma cells in the spleen.::Homo sapiens (taxid: 9606) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 98.08::3-156 PF05804::KAP 98.47::4-146 GO:0034605::cellular response to heat confident rp_3now_A_1::29-142 very confident psy12638 334 P70188::Kinesin-associated protein 3 ::Involved in tethering the chromosomes to the spindle pole and in chromosome movement. Binds to the tail domain of the KIF3A/KIF3B heterodimer to form a heterotrimeric KIF3 complex and may regulate the membrane binding of this complex.::Mus musculus (taxid: 10090) portable COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 99.32::49-331 PF05804::KAP 100.00::18-334 GO:0044446::intracellular organelle part confident hh_2z6h_A_1::45-242,244-245,247-249,255-319,321-333 confident psy14164 361 Q99P31::Hsp70-binding protein 1 ::Inhibits HSPA1A chaperone activity by changing the conformation of the ATP-binding domain of HSPA1A and interfering with ATP binding. Interferes with ubiquitination mediated by STUB1 and inhibits chaperone-assisted degradation of target proteins.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 99.97::83-352 PF08609::Fes1 99.69::46-137 GO:0031398::positive regulation of protein ubiquitination confident hh_1xqr_A_1::82-92,94-280,284-358 very confident psy355 285 Q99P31::Hsp70-binding protein 1 ::Inhibits HSPA1A chaperone activity by changing the conformation of the ATP-binding domain of HSPA1A and interfering with ATP binding. Interferes with ubiquitination mediated by STUB1 and inhibits chaperone-assisted degradation of target proteins.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::18-276 PF10508::Proteasom_PSMB 99.42::39-228 GO:0031398::positive regulation of protein ubiquitination confident hh_1xqr_A_1::6-16,18-204,208-282 very confident psy15268 256 Q69ZR2::E3 ubiquitin-protein ligase HECTD1 ::Probable E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in development of the head mesenchyme and neural tube closure.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 100.00::1-253 PF10508::Proteasom_PSMB 98.53::2-238 GO:0044699::single-organism process confident hh_1wa5_B_1::1-11,13-31,33-47,55-101,106-157,161-184,215-253 confident psy4858 979 Q6PDS3::Sterile alpha and TIR motif-containing protein 1 ::Involved in innate immnune response. Acts as a negative regulator of TICAM1/TRIF-dependent Toll-like receptor signaling by inhibiting induction of TLR3- and TLR4-dependent genes. Specifically blocks TICAM1/TRIF-dependent transcription-factor activation and gene induction, without affecting the MYD88-dependent pathway or non-TLR signaling. Negative regulator of NF-kappa-B and IRF activation.::Mus musculus (taxid: 10090) confident COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 99.02::189-477 PF13676::TIR_2 99.56::660-773 GO:0043025::neuronal cell body confident hh_1v85_A_1::503-575 very confident psy12599 269 O35344::Importin subunit alpha-3 ::Functions in nuclear protein import as an adapter protein for nuclear receptor KPNB1. Binds specifically and directly to substrates containing either a simple or bipartite NLS motif. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. In vitro, mediates the nuclear import of human cytomegalovirus UL84 by recognizing a non-classical NLS.::Mus musculus (taxid: 10090) portable COG5064::SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] 99.89::164-267 PF15375::DUF4602 99.55::115-168 GO:0044446::intracellular organelle part confident hh_3tpo_A_1::164-213,215-268 very confident psy5448 322 P11831::Serum response factor ::SRF is a transcription factor that binds to the serum response element (SRE), a short sequence of dyad symmetry located 300 bp to the 5' of the site of transcription initiation of some genes (such as FOS). Required for cardiac differentiation and maturation.::Homo sapiens (taxid: 9606) confident COG5068::ARG80 Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription] 99.68::135-220 PF00319::SRF-TF 99.83::144-194 GO:0001076::RNA polymerase II transcription factor binding transcription factor activity confident rp_1k6o_B_1::129-228 very confident psy7483 230 Q921U8::Smoothelin ::Structural protein of the cytoskeleton.::Mus musculus (taxid: 10090) portable COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.38::146-230 PF00307::CH 99.40::158-229 GO:0005634::nucleus confident hh_1wku_A_1::154-230 very confident psy6952 168 P05095::Alpha-actinin A ::F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein. Increases the actin-stimulated ATPase activity of myosin. Involved in vegetative cell growth, phagocytosis, motility and development, probably through stabilization of the actin network in the cortical cytoskeleton.::Dictyostelium discoideum (taxid: 44689) portable COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.04::1-76 PF00307::CH 98.10::3-62 GO:0015629::actin cytoskeleton confident hh_1sjj_A_1::1-82,88-93,96-119 very confident psy4515 149 Q69ZW3::EH domain-binding protein 1 ::May play a role in actin reorganization. Links clathrin-mediated endocytosis to the actin cytoskeleton.::Mus musculus (taxid: 10090) portable COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.28::6-111 PF00307::CH 98.52::63-112 GO:0015629::actin cytoskeleton confident hh_2d87_A_1::58-144 very confident psy3342 61 O15020::Spectrin beta chain, non-erythrocytic 2 ::Probably plays an important role in neuronal membrane skeleton.::Homo sapiens (taxid: 9606) confident COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.10::18-61 PF00307::CH 98.68::22-61 GO:0030426::growth cone confident hh_1wku_A_1::6-14,18-61 very confident psy6951 72 Q8IY33::MICAL-like protein 2 ::May be a cytoskeletal regulator.::Homo sapiens (taxid: 9606) confident COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 98.92::4-70 PF00307::CH 98.62::4-70 GO:0030864::cortical actin cytoskeleton confident hh_1wku_A_1::3-36,44-71 very confident psy7817 228 Q6ZWR6::Nesprin-1 ::Multi-isomeric modular protein which forms a linking network between organelles and the actin cytoskeleton to maintain the subcellular spatial organization. Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments. Involved in the maintenance of nuclear organization and structural integrity. Connects nuclei to the cytoskeleton by interacting with the nuclear envelope and with F-actin in the cytoplasm (By similarity). Required for centrosome migration to the apical cell surface during early ciliogenesis.::Mus musculus (taxid: 10090) confident COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.97::1-224 PF00307::CH 99.73::7-111 GO:0031965::nuclear membrane confident hh_1sh5_A_1::1-55,58-116,124-127,135-227 very confident psy10625 104 P12814::Alpha-actinin-1 ::F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein.::Homo sapiens (taxid: 9606) confident COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.45::21-100 PF00307::CH 99.29::28-100 GO:0043234::protein complex confident hh_1sjj_A_1::22-100 very confident psy5020 120 P13466::Gelation factor ::F-actin cross-linking protein.::Dictyostelium discoideum (taxid: 44689) portable COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.50::32-119 PF00307::CH 99.50::40-115 GO:0045111::intermediate filament cytoskeleton confident hh_3hoc_A_1::31-119 very confident psy10623 216 O13728::Alpha-actinin-like protein 1 ::Binds to actin and is involved in actin-ring formation and organization. Plays a role in cytokinesis and is involved in septation.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.93::16-208 PF00307::CH 99.82::20-122 GO:0051015::actin filament binding confident hh_1bkr_A_1::16-124 very confident psy4004 319 P18091::Alpha-actinin, sarcomeric ::F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein.::Drosophila melanogaster (taxid: 7227) very confident COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 100.00::23-316 PF00307::CH 99.74::144-247 GO:0051015::actin filament binding very confident hh_1sjj_A_1::23-248,285-317 very confident psy6471 635 Q9QXS1::Plectin ::Interlinks intermediate filaments with microtubules and microfilaments and anchors intermediate filaments to desmosomes or hemidesmosomes. May be involved not only in the cross-linking and stabilization of cytoskeletal intermediate filaments network, but also in the regulation of their dynamics.::Mus musculus (taxid: 10090) portable COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 99.41::13-196 PF00435::Spectrin 99.37::503-615 GO:0030426::growth cone confident hh_2odv_A_1::93-172,174-242,244-246,249-317 very confident psy2679 526 Q9NVD7::Alpha-parvin ::Probably plays a role in the regulation of cell adhesion and cytoskeleton organization. Plays a role in ciliogenesis.::Homo sapiens (taxid: 9606) portable COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 98.45::347-435 PF04420::CHD5 99.91::400-513 GO:0015629::actin cytoskeleton confident hh_2vzc_A_1::328-435 very confident psy18058 2301 Q00963::Spectrin beta chain ::Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. Interacts with calmodulin in a calcium-dependent manner.::Drosophila melanogaster (taxid: 7227) very confident COG5069::SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton] 100.00::47-396 PF15410::PH_9 99.91::2156-2266 GO:0030506::ankyrin binding very confident rp_1bkr_A_1::171-278 very confident psy5010 178 Q968A5::GDP-fucose transporter ::Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.::Caenorhabditis elegans (taxid: 6239) confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.74::18-168 PF03151::TPT 99.86::20-161 GO:0009987::cellular process confident hh_3b5d_A_1::95-162 portable psy13326 143 Q96K37::Solute carrier family 35 member E1 ::Putative transporter.::Homo sapiens (taxid: 9606) confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 98.89::12-97 PF03151::TPT 99.72::15-91 GO:0043231::intracellular membrane-bounded organelle confident hh_3b5d_A_1::43-92 portable psy348 293 Q8CIA5::UDP-xylose and UDP-N-acetylglucosamine transporter ::Sugar transporter that specifically mediates the transport of UDP-xylose (UDP-Xyl) and UDP-N-acetylglucosamine (UDP-GlcNAc) from cytosol into Golgi.::Mus musculus (taxid: 10090) confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.68::16-271 PF08449::UAA 100.00::15-270 GO:0005458::GDP-mannose transmembrane transporter activity confident hh_3b5d_A_1::19-39,41-91 portable psy14104 319 Q66HX0::Solute carrier family 35 member B1 ::Probable sugar transporter.::Danio rerio (taxid: 7955) very confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.90::15-316 PF08449::UAA 100.00::12-313 GO:0005459::UDP-galactose transmembrane transporter activity confident hh_3b5d_A_1::86-154 portable psy1072 324 Q968A5::GDP-fucose transporter ::Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.::Caenorhabditis elegans (taxid: 6239) very confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.96::10-318 PF08449::UAA 99.97::14-314 GO:0030259::lipid glycosylation confident hh_3b5d_A_1::87-156 portable psy14376 327 Q968A5::GDP-fucose transporter ::Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.::Caenorhabditis elegans (taxid: 6239) very confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.94::15-319 PF08449::UAA 99.97::29-315 GO:0030259::lipid glycosylation confident hh_3b5d_A_1::89-158 portable psy1825 327 Q968A5::GDP-fucose transporter ::Involved in GDP-fucose import from the cytoplasm into the Golgi lumen.::Caenorhabditis elegans (taxid: 6239) very confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.94::15-319 PF08449::UAA 99.97::29-315 GO:0030259::lipid glycosylation confident hh_3b5d_A_1::89-158 portable psy14395 471 Q8TB61::Adenosine 3'-phospho 5'-phosphosulfate transporter 1 ::Mediates the transport of adenosine 3'-phospho 5'-phosphosulfate (PAPS), from cytosol into Golgi. PAPS is a universal sulfuryl donor for sulfation events that take place in the Golgi. May indirectly participate in activation of the NF-kappa-B and MAPK pathways.::Homo sapiens (taxid: 9606) confident COG5070::VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.71::110-462 PF08449::UAA 100.00::113-460 GO:0031301::integral to organelle membrane confident hh_3b5d_A_1::390-455 portable psy10889 267 Q9H9Q2::COP9 signalosome complex subunit 7b ::Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, JUN, I-kappa-B-alpha/NFKBIA, ITPK1 and IRF8/ICSBP, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively.::Homo sapiens (taxid: 9606) very confident COG5071::RPN5 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 95.49::112-196 PF01399::PCI 99.53::63-160 GO:0005829::cytosol confident hh_3chm_A_1::7-85,88-173 very confident psy292 452 O00232::26S proteasome non-ATPase regulatory subunit 12 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Homo sapiens (taxid: 9606) very confident COG5071::RPN5 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 100.00::11-451 PF01399::PCI 99.66::300-411 GO:0006521::regulation of cellular amino acid metabolic process confident hh_4b4t_P_1::6-34,36-217,220-335,337-451 very confident psy4458 303 O00232::26S proteasome non-ATPase regulatory subunit 12 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Homo sapiens (taxid: 9606) confident COG5071::RPN5 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 100.00::1-302 PF01399::PCI 99.71::151-262 GO:0006521::regulation of cellular amino acid metabolic process confident hh_4b4t_P_1::1-67,70-185,187-302 very confident psy9642 437 Q5ZJF1::COP9 signalosome complex subunit 3 ::Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of E3 ligase complexes, leading to modify the Ubl ligase activity.::Gallus gallus (taxid: 9031) very confident COG5071::RPN5 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 99.78::145-395 PF01399::PCI 99.70::263-367 GO:0008180::signalosome very confident hh_3t5x_A_1::179-219,221-237,239-249,256-259,262-368 confident psy7321 408 Q9V345::COP9 signalosome complex subunit 4 ::Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. The CSN complex plays an essential role in oogenesis and embryogenesis and is required for proper photoreceptor R cell differentiation and promote lamina glial cell migration or axon targeting. It also promotes Ubl-dependent degradation of cyclin E (CycE) during early oogenesis.::Drosophila melanogaster (taxid: 7227) very confident COG5071::RPN5 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 100.00::55-395 PF01399::PCI 99.64::261-365 GO:0044212::transcription regulatory region DNA binding very confident hh_1ufm_A_1::295-369 very confident psy9184 562 P83103::Putative serine/threonine-protein kinase haspin homolog ::::Drosophila melanogaster (taxid: 7227) confident COG5072::ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning] 99.84::228-548 PF00069::Pkinase 99.92::263-562 GO:0004672::protein kinase activity confident bp_2vuw_A_1::246-524 very confident psy15902 93 P83103::Putative serine/threonine-protein kinase haspin homolog ::::Drosophila melanogaster (taxid: 7227) confident COG5072::ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning] 99.96::8-89 PF12330::DUF3635 99.95::37-91 GO:0044763::single-organism cellular process confident bp_2vuw_A_1::16-72 very confident psy3119 187 Q9CPY6::Glucose-induced degradation protein 4 homolog ::::Mus musculus (taxid: 10090) very confident COG5073::VID24 Vacuolar import and degradation protein [Intracellular trafficking and secretion] 100.00::6-187 PF09783::Vac_ImportDeg 100.00::10-178 GO:0051469::vesicle fusion with vacuole confident no hit no match psy15387 273 O16000::Syntaxin-1A homolog ::Plays a critical role in several secretory processes, including cuticle secretion and neurotransmitter release, and probably assists in neuronal membrane maturation or the final stages of neuronal differentiation. Essential for embryonic viability and development. Has a role in dauer formation and adult life span. Required for locomotion.::Caenorhabditis elegans (taxid: 6239) confident COG5074::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 100.00::36-273 PF05739::SNARE 99.63::206-268 GO:0007340::acrosome reaction confident hh_1dn1_B_1::8-109,113-182,184-273 very confident psy15325 102 P32850::Syntaxin-1A ::Potentially involved in docking of synaptic vesicles at presynaptic active zones. May play a critical role in neurotransmitter exocytosis. May mediate Ca(2+)-regulation of exocytosis acrosomal reaction in sperm.::Bos taurus (taxid: 9913) confident COG5074::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 99.93::1-102 PF05739::SNARE 98.94::65-101 GO:0007340::acrosome reaction confident hh_1dn1_B_1::1-101 very confident psy14608 199 P32850::Syntaxin-1A ::Potentially involved in docking of synaptic vesicles at presynaptic active zones. May play a critical role in neurotransmitter exocytosis. May mediate Ca(2+)-regulation of exocytosis acrosomal reaction in sperm.::Bos taurus (taxid: 9913) confident COG5074::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 99.48::65-199 PF05739::SNARE 98.89::135-195 GO:0032502::developmental process confident hh_1s94_A_1::12-30,33-90,123-154 very confident psy2301 350 O14662::Syntaxin-16 ::SNARE involved in vesicular transport from the late endosomes to the trans-Golgi network.::Homo sapiens (taxid: 9606) confident COG5074::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 100.00::29-299 PF05739::SNARE 99.57::209-271 GO:0044444::cytoplasmic part confident hh_2xhe_B_1::18-156,174-189,191-199,201-274 very confident psy11502 109 Q2KIU0::Vesicle transport through interaction with t-SNAREs homolog 1B ::V-SNARE that mediates vesicle transport pathways through interactions with t-SNAREs on the target membrane. These interactions are proposed to mediate aspects of the specificity of vesicle trafficking and to promote fusion of the lipid bilayers. May be concerned with increased secretion of cytokines associated with cellular senescence.::Bos taurus (taxid: 9913) portable COG5074::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 97.53::21-101 PF12352::V-SNARE_C 99.70::14-79 GO:0044444::cytoplasmic part confident hh_1gl2_C_1::14-77 very confident psy6549 109 Q2KIU0::Vesicle transport through interaction with t-SNAREs homolog 1B ::V-SNARE that mediates vesicle transport pathways through interactions with t-SNAREs on the target membrane. These interactions are proposed to mediate aspects of the specificity of vesicle trafficking and to promote fusion of the lipid bilayers. May be concerned with increased secretion of cytokines associated with cellular senescence.::Bos taurus (taxid: 9913) portable COG5074::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 97.53::21-101 PF12352::V-SNARE_C 99.70::14-79 GO:0044444::cytoplasmic part confident hh_1gl2_C_1::14-77 very confident psy15784 231 Q9ER00::Syntaxin-12 ::SNARE that acts to regulate protein transport between late endosomes and the trans-Golgi network. The SNARE complex containing STX6, STX12, VAMP4 and VTI1A mediates vesicle fusion (in vitro).::Mus musculus (taxid: 10090) confident COG5074::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 99.95::23-231 PF14523::Syntaxin_2 99.62::1-99 GO:0031902::late endosome membrane confident hh_2dnx_A_1::1-103 very confident psy5115 171 Q9W0T1::Nucleosome-remodeling factor subunit NURF301 ::Histone-binding component of NURF (nucleosome remodeling factor), a complex which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. Specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. Required for homeotic gene expression, proper larval blood cell development, normal male X chromosome morphology, ecdysteroid signaling and metamorphosis.::Drosophila melanogaster (taxid: 7227) confident COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.82::79-167 PF00439::Bromodomain 99.93::68-151 GO:0004672::protein kinase activity confident hh_3d7c_A_1::61-163 very confident psy16435 277 Q338B9::Histone acetyltransferase GCN5 ::Acetylates histone H3. Acetylation of histones gives a specific tag for epigenetic transcription activation. Operates in concert with certain DNA-binding transcriptional activators. Acts via the formation of large multiprotein complexes that modify the chromatin.::Oryza sativa subsp. japonica (taxid: 39947) portable COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.79::124-212 PF00439::Bromodomain 99.90::113-196 GO:0005634::nucleus confident hh_3nxb_A_1::108-207 very confident psy1228 202 Q9UTN6::Chromatin structure-remodeling complex subunit snf21 ::Helicase. Component of the chromatin structure remodeling complex (RSC), which is involved in transcription regulation and nucleosome positioning. Controls particularly membrane and organelle development genes.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.86::78-192 PF00439::Bromodomain 99.91::86-175 GO:0005856::cytoskeleton confident hh_2dat_A_1::77-189 very confident psy7968 91 Q9UIF8::Bromodomain adjacent to zinc finger domain protein 2B ::May play a role in transcriptional regulation interacting with ISWI.::Homo sapiens (taxid: 9606) confident COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.89::2-89 PF00439::Bromodomain 99.93::6-78 GO:0006334::nucleosome assembly confident hh_2dat_A_1::5-89 very confident psy245 566 F7DRV9::Bromodomain testis-specific protein ::Testis-specific chromatin protein that specifically binds histone H4 acetylated at 'Lys-5' and 'Lys-8' (H4K5ac and H4K8ac, respectively) and plays a key role in spermatogenesis. Required in late pachytene spermatocytes: plays a role in meiotic and post-meiotic cells by binding to acetylated histones at the promoter of specific meiotic and post-meiotic genes, facilitating their activation at the appropriate time. In the post-meiotic phase of spermatogenesis, binds to hyperacetylated histones and participates in their general removal from DNA.::Xenopus tropicalis (taxid: 8364) confident COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.89::131-366 PF00439::Bromodomain 99.81::266-354 GO:0006338::chromatin remodeling confident hh_3jvl_A_1::257-370 very confident psy14234 779 Q15059::Bromodomain-containing protein 3 ::::Homo sapiens (taxid: 9606) confident COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.87::139-477 PF00439::Bromodomain 99.80::129-214 GO:0042393::histone binding confident rp_3jvl_A_1::367-480 very confident psy1225 256 Q8BSQ9::Protein polybromo-1 ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology) (By similarity). Act as a negative regulator of cell proliferation.::Mus musculus (taxid: 10090) portable COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.96::4-255 PF00439::Bromodomain 99.84::3-84 GO:0043229::intracellular organelle confident hh_3uv5_A_1::2-157 very confident psy15468 653 Q8BSQ9::Protein polybromo-1 ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology) (By similarity). Act as a negative regulator of cell proliferation.::Mus musculus (taxid: 10090) portable COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.90::102-379 PF00439::Bromodomain 99.76::278-367 GO:0043229::intracellular organelle confident hh_3aad_A_2::275-290,297-383,391-395,410-414,419-422,432-432,460-475,477-478,480-567 very confident psy4829 120 Q9FT54::Transcription factor GTE6 ::Regulates differences in leaf patterning between juvenile and mature leaves by controlling differences in the development of primordia produced during juvenile and mature phases. Acts by activating transcription of the myb-domain protein AS1, a gene involved in leaf-axis specification. Associates with the promoter and the start of the transcribed region of AS1 and up-regulates expression of AS1 through acetylation of histones H3 and H4.::Arabidopsis thaliana (taxid: 3702) portable COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 99.84::7-99 PF00439::Bromodomain 99.92::1-81 GO:0070603::SWI/SNF superfamily-type complex confident hh_3mb3_A_1::1-12,14-41,45-98 very confident psy10248 194 Q8TBE0::Bromo adjacent homology domain-containing 1 protein ::Heterochromatin protein that acts as a transcription repressor and has the ability to promote the formation of large heterochromatic domains. May act by recruiting heterochromatin proteins such as CBX5 (HP1 alpha), HDAC5 and MBD1. Represses IGF2 expression by binding to its CpG-rich P3 promoter and recruiting heterochromatin proteins. At specific stages of Listeria infection, in complex with TRIM28, corepresses interferon-stimulated genes, including IL28A, IL28B and IL29.::Homo sapiens (taxid: 9606) portable COG5076::Transcription factor involved in chromatin remodeling, contains bromodomain [Chromatin structure and dynamics / Transcription] 92.79::38-132 PF01426::BAH 99.96::41-193 GO:0000976::transcription regulatory region sequence-specific DNA binding confident hh_1w4s_A_1::26-37,39-55,57-73,75-135,142-143,170-193 very confident psy17537 773 Q6U7I1::Ubiquitin carboxyl-terminal hydrolase 7 ::Hydrolase that deubiquitinates target proteins. May induces p53/TP53-dependent cell growth repression and apoptosis. May be involved in cell proliferation during early embryonic development.::Gallus gallus (taxid: 9031) confident COG5077::Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::266-733 PF00443::UCH 100.00::350-702 GO:0005829::cytosol confident hh_1nb8_A_1::345-612,659-688,691-733 very confident psy10761 365 Q0VCW1::Speckle-type POZ protein ::Inhibits IPF1/PDX1 transactivation of established target promoters, such as insulin, may be by recruiting a repressor complex. In complex with CUL3, involved in ubiquitination of BMI1, DAXX and H2AFY, and probably also in ubiquitination and proteasomal degradation of Gli2 or Gli3.::Bos taurus (taxid: 9913) very confident COG5077::Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.05::22-157 PF00651::BTB 99.82::181-287 GO:0031463::Cul3-RING ubiquitin ligase complex very confident hh_3hqi_A_1::18-328 very confident psy7814 460 Q28DL4::TNF receptor-associated factor 6 ::E3 ubiquitin-protein ligase that mediates ubiquitination of proteins. Adapter protein that seems to play a role in signal transduction.::Xenopus tropicalis (taxid: 8364) portable COG5077::Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 98.89::312-459 PF00917::MATH 99.75::317-457 GO:0005829::cytosol confident hh_1ca9_A_1::282-416,418-420,422-439,443-459 very confident psy225 450 Q61382::TNF receptor-associated factor 4 ::Adapter protein and signal transducer that links members of the tumor necrosis factor receptor (TNFR) family to different signaling pathways. Plays a role in the activation of NF-kappa-B and JNK, and in the regulation of cell survival and apoptosis. Regulates activation of NF-kappa-B in response to signaling through Toll-like receptors. Required for activation of RPS6KB1 in response to TNF signaling. Modulates TRAF6 functions (By similarity). Required for normal skeleton development, and for normal development of the respiratory tract.::Mus musculus (taxid: 10090) confident COG5077::Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.06::295-446 PF00917::MATH 99.77::308-444 GO:0046330::positive regulation of JNK cascade confident hh_1flk_A_1::238-256,258-407,409-450 very confident psy454 134 Q28DL4::TNF receptor-associated factor 6 ::E3 ubiquitin-protein ligase that mediates ubiquitination of proteins. Adapter protein that seems to play a role in signal transduction.::Xenopus tropicalis (taxid: 8364) portable COG5077::Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.01::5-133 PF00917::MATH 99.83::8-131 GO:0050896::response to stimulus confident hh_1ca9_A_1::7-91,94-109,111-112,114-132 very confident psy17539 443 Q6U7I1::Ubiquitin carboxyl-terminal hydrolase 7 ::Hydrolase that deubiquitinates target proteins. May induces p53/TP53-dependent cell growth repression and apoptosis. May be involved in cell proliferation during early embryonic development.::Gallus gallus (taxid: 9031) portable COG5077::Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::1-441 PF14533::USP7_C2 100.00::90-429 GO:0005829::cytosol confident hh_2ylm_A_1::1-85,87-115,120-124,129-137,162-164,166-167,169-183,191-219,223-243,327-395,397-425 very confident psy3497 151 P35128::Ubiquitin-conjugating enzyme E2 N ::Catalyzes the covalent attachment of ubiquitin to other proteins.::Drosophila melanogaster (taxid: 7227) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::4-149 PF00179::UQ_con 100.00::7-144 GO:0000729::DNA double-strand break processing very confident hh_2c2v_B_1::4-150 very confident psy89 119 P63280::SUMO-conjugating enzyme UBC9 ::Accepts the ubiquitin-like proteins SUMO1, SUMO2 and SUMO3 from the UBLE1A-UBLE1B E1 complex and catalyzes their covalent attachment to other proteins with the help of an E3 ligase such as RANBP2 or CBX4. Can catalyze the formation of poly-SUMO chains. Essential for nuclear architecture, chromosome segregation and embryonic viability. Necessary for sumoylation of FOXL2 and KAT5.::Mus musculus (taxid: 10090) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::6-118 PF00179::UQ_con 100.00::3-118 GO:0001650::fibrillar center very confident hh_2grr_A_1::17-118 very confident psy15654 189 B5DKM4::Ubiquitin-conjugating enzyme E2 S ::Catalyzes the covalent attachment of ubiquitin to other proteins. Acts as an essential factor of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated ubiquitin ligase that controls progression through mitosis. Acts by specifically elongating polyubiquitin chains initiated by the E2 enzyme vih/UbcH10 on APC/C substrates, enhancing the degradation of APC/C substrates by the proteasome and promoting mitotic exit.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::11-160 PF00179::UQ_con 100.00::17-155 GO:0004842::ubiquitin-protein ligase activity very confident hh_1zdn_A_1::3-91,93-159 very confident psy17588 62 Q28FC1::Ubiquitin-conjugating enzyme E2 W ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Catalyzes monoubiquitination. Involved in degradation of misfolded chaperone substrate and DNA repair.::Xenopus tropicalis (taxid: 8364) portable COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.91::2-62 PF00179::UQ_con 99.82::2-62 GO:0005634::nucleus confident hh_2a7l_A_1::2-16,19-62 very confident psy10005 117 Q5RF84::Ubiquitin-conjugating enzyme E2 G2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. Involved in endoplasmic reticulum-associated degradation (ERAD).::Pongo abelii (taxid: 9601) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-115 PF00179::UQ_con 100.00::1-110 GO:0005829::cytosol very confident hh_3h8k_A_1::1-115 very confident psy10015 90 Q5RF84::Ubiquitin-conjugating enzyme E2 G2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. Involved in endoplasmic reticulum-associated degradation (ERAD).::Pongo abelii (taxid: 9601) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.82::1-70 PF00179::UQ_con 99.59::8-73 GO:0005829::cytosol confident hh_3h8k_A_1::2-56,59-73 very confident psy10014 72 Q5RF84::Ubiquitin-conjugating enzyme E2 G2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. Involved in endoplasmic reticulum-associated degradation (ERAD).::Pongo abelii (taxid: 9601) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.88::11-72 PF00179::UQ_con 99.73::17-72 GO:0005829::cytosol confident hh_3h8k_A_1::12-72 very confident psy818 214 Q6BYG4::Ubiquitin-conjugating enzyme E2 6 ::Catalyzes the covalent attachment of ubiquitin to other proteins. Functions in degradation of misfolded or regulated proteins localized in the endoplasmic reticulum (ER) lumen or membrane via the ubiquitin-proteasome system. Cognate E2 conjugating enzyme for the DOA10 ubiquitin ligase complex, which is part of the ERAD-C pathway responsible for the rapid degradation of membrane proteins with misfolded cytoplasmic domains.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::4-128 PF00179::UQ_con 99.96::11-121 GO:0005829::cytosol confident hh_2f4w_A_1::5-159 very confident psy7478 180 P42749::Ubiquitin-conjugating enzyme E2 5 ::Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.::Arabidopsis thaliana (taxid: 3702) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::60-180 PF00179::UQ_con 99.97::59-180 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2z5d_A_1::59-72,79-85,89-102,105-149,151-180 very confident psy2846 392 P62837::Ubiquitin-conjugating enzyme E2 D2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. Mediates the selective degradation of short-lived and abnormal proteins. Functions in the E6/E6-AP-induced ubiquitination of p53/TP53. Mediates ubiquitination of PEX5 and autoubiquitination of STUB1 and TRAF6. Involved in the signal-induced conjugation and subsequent degradation of NFKBIA, FBXW2-mediated GCM1 ubiquitination and degradation, MDM2-dependent degradation of p53/TP53 and the activation of MAVS in the mitochondria by DDX58/RIG-I in response to viral infection. Essential for viral activation of IRF3.::Homo sapiens (taxid: 9606) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::209-380 PF00179::UQ_con 100.00::214-380 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_1z2u_A_1::209-299,313-327,330-335,337-348,364-380 very confident psy90 125 Q95017::SUMO-conjugating enzyme UBC9 ::Accepts the ubiquitin-like protein smo-1 from the aos-1-uba-2 E1 complex and catalyzes its covalent attachment to other proteins with the help of an E3 ligase such as gei-17. Required to sumoylate the ETS transcription factor lin-1 and the Polycomb protein sop-2. Required for embryonic development, fertility, vulval morphogenesis and inhibition of vulval cell fates.::Caenorhabditis elegans (taxid: 6239) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::3-125 PF00179::UQ_con 100.00::8-125 GO:0008022::protein C-terminus binding very confident hh_2grr_A_1::1-125 very confident psy621 289 Q6ZWZ2::Ubiquitin-conjugating enzyme E2 R2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes monoubiquitination and 'Lys-48'-linked polyubiquitination. May be involved in degradation of katenin.::Mus musculus (taxid: 10090) portable COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.94::6-131 PF00179::UQ_con 99.84::172-286 GO:0016328::lateral plasma membrane confident hh_3bzh_A_1::7-32,34-131 very confident psy16981 302 A3KN22::NEDD8-conjugating enzyme Ubc12 ::Accepts the ubiquitin-like protein NEDD8 from the UBA3-NAE1 E1 complex and catalyzes its covalent attachment to other proteins. The specific interaction with the E3 ubiquitin ligase RBX1, but not RBX2, suggests that the RBX1-UBE2M complex neddylates specific target proteins, such as CUL1, CUL2, CUL3 and CUL4. Involved in cell proliferation.::Bos taurus (taxid: 9913) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::149-292 PF00179::UQ_con 100.00::152-287 GO:0018169::ribosomal S6-glutamic acid ligase activity confident hh_1y8x_A_1::147-302 very confident psy4609 242 Q9CY34::NEDD8-conjugating enzyme UBE2F ::Accepts the ubiquitin-like protein NEDD8 from the UBA3-NAE1 E1 complex and catalyzes its covalent attachment to other proteins. The specific interaction with the E3 ubiquitin ligase RBX2, but not RBX1, suggests that the RBX2-UBE2F complex neddylates specific target proteins, such as CUL5.::Mus musculus (taxid: 10090) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::89-241 PF00179::UQ_con 100.00::92-236 GO:0019788::NEDD8 ligase activity very confident hh_3fn1_B_1::79-241 very confident psy3659 78 P52482::Ubiquitin-conjugating enzyme E2 E1 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Catalyzes the covalent attachment of ISG15 to other proteins. Mediates the selective degradation of short-lived and abnormal proteins. In vitro also catalyzes 'Lys-48'-linked polyubiquitination.::Mus musculus (taxid: 10090) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.93::8-77 PF00179::UQ_con 99.83::11-77 GO:0019915::lipid storage very confident hh_3bzh_A_1::4-77 very confident psy623 69 Q6ZWZ2::Ubiquitin-conjugating enzyme E2 R2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes monoubiquitination and 'Lys-48'-linked polyubiquitination. May be involved in degradation of katenin.::Mus musculus (taxid: 10090) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.87::8-66 PF00179::UQ_con 99.73::12-66 GO:0022008::neurogenesis confident rp_3rz3_A_1::5-60 very confident psy15855 118 P25153::Ubiquitin-conjugating enzyme E2-17 kDa ::Catalyzes the covalent attachment of ubiquitin to other proteins. Required for postreplication repair of UV-damaged DNA.::Drosophila melanogaster (taxid: 7227) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-117 PF00179::UQ_con 100.00::1-112 GO:0033503::HULC complex very confident hh_2aak_A_1::1-118 very confident psy17486 172 P52486::Ubiquitin-conjugating enzyme E2-22 kDa ::Catalyzes the covalent attachment of ubiquitin to other proteins.::Drosophila melanogaster (taxid: 7227) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::2-101 PF00179::UQ_con 99.94::2-95 GO:0034450::ubiquitin-ubiquitin ligase activity confident hh_3k9o_A_1::2-8,10-88,115-172 very confident psy15032 226 Q5R6C9::Ubiquitin-conjugating enzyme E2 variant 2 ::Has no ubiquitin ligase activity on its own. The UBE2V2/UBE2N heterodimer catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through 'Lys-63'. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. Plays a role in the control of progress through the cell cycle and differentiation. Plays a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage.::Pongo abelii (taxid: 9601) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::78-215 PF00179::UQ_con 99.97::81-214 GO:0070534::protein K63-linked ubiquitination very confident hh_2a4d_A_1::73-173,179-186,190-206,208-214 very confident psy17487 199 P52486::Ubiquitin-conjugating enzyme E2-22 kDa ::Catalyzes the covalent attachment of ubiquitin to other proteins.::Drosophila melanogaster (taxid: 7227) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::3-154 PF00179::UQ_con 100.00::8-149 GO:0070936::protein K48-linked ubiquitination very confident hh_2bep_A_1::1-155 very confident psy15977 152 P62255::Ubiquitin-conjugating enzyme E2 G1 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-, as well as 'Lys-63'-linked polyubiquitination. May be involved in degradation of muscle-specific proteins. Mediates polyubiquitination of CYP3A4.::Rattus norvegicus (taxid: 10116) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-151 PF00179::UQ_con 100.00::2-146 GO:0070936::protein K48-linked ubiquitination very confident hh_2awf_A_1::2-128,131-145 very confident psy6012 168 P62256::Ubiquitin-conjugating enzyme E2 H ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-11'- and 'Lys-48'-linked polyubiquitination. Capable, in vitro, to ubiquitinate histone H2A.::Homo sapiens (taxid: 9606) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-145 PF00179::UQ_con 100.00::10-140 GO:0070936::protein K48-linked ubiquitination very confident hh_2z5d_A_1::1-68,77-103,105-146 very confident psy11956 126 P62256::Ubiquitin-conjugating enzyme E2 H ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-11'- and 'Lys-48'-linked polyubiquitination. Capable, in vitro, to ubiquitinate histone H2A.::Homo sapiens (taxid: 9606) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-123 PF00179::UQ_con 99.97::10-122 GO:0070936::protein K48-linked ubiquitination confident hh_2z5d_A_1::1-102,109-123 very confident psy11961 109 P62256::Ubiquitin-conjugating enzyme E2 H ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-11'- and 'Lys-48'-linked polyubiquitination. Capable, in vitro, to ubiquitinate histone H2A.::Homo sapiens (taxid: 9606) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::1-108 PF00179::UQ_con 99.97::17-107 GO:0070936::protein K48-linked ubiquitination confident hh_2z5d_A_1::1-107 very confident psy4279 129 P62837::Ubiquitin-conjugating enzyme E2 D2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. Mediates the selective degradation of short-lived and abnormal proteins. Functions in the E6/E6-AP-induced ubiquitination of p53/TP53. Mediates ubiquitination of PEX5 and autoubiquitination of STUB1 and TRAF6. Involved in the signal-induced conjugation and subsequent degradation of NFKBIA, FBXW2-mediated GCM1 ubiquitination and degradation, MDM2-dependent degradation of p53/TP53 and the activation of MAVS in the mitochondria by DDX58/RIG-I in response to viral infection. Essential for viral activation of IRF3.::Homo sapiens (taxid: 9606) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::2-128 PF00179::UQ_con 100.00::4-128 GO:0070936::protein K48-linked ubiquitination very confident hh_2c4o_A_1::2-64,92-128 very confident psy634 139 Q8CFI2::Ubiquitin-conjugating enzyme E2 R1 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'-linked polyubiquitination. Cooperates with the E2 UBCH5C and the SCF(FBXW11) E3 ligase complex for the polyubiquitination of NFKBIA leading to its subsequent proteasomal degradation. Performs ubiquitin chain elongation building ubiquitin chains from the UBE2D3-primed NFKBIA-linked ubiquitin. UBE2D3 acts as an initiator E2, priming the phosphorylated NFKBIA target at positions 'Lys-21' and/or 'Lys-22' with a monoubiquitin. Cooperates with the SCF(SKP2) E3 ligase complex to regulate cell proliferation through ubiquitination and degradation of MYBL2 and KIP1. Involved in ubiquitin conjugation and degradation of CREM isoform ICERIIgamma and ATF15 resulting in abrogation of ICERIIgamma- and ATF5-mediated repression of cAMP-induced transcription during both meiotic and mitotic cell cycles. Involved in the regulation of the cell cycle G2/M phase through its targeting of the WEE1 kinase for ubiquitination and degradation. Also involved in the degradation of beta-catenin.::Mus musculus (taxid: 10090) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.62::3-66 PF00179::UQ_con 99.24::3-61 GO:0070936::protein K48-linked ubiquitination confident no hit no match psy3655 194 Q91W82::Ubiquitin-conjugating enzyme E2 E2 ::Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-11'- and 'Lys-48'-, as well as 'Lys-63'-linked polyubiquitination.::Mus musculus (taxid: 10090) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::10-183 PF00179::UQ_con 100.00::11-178 GO:0070936::protein K48-linked ubiquitination very confident hh_3bzh_A_1::10-93,124-162,165-183 very confident psy12515 174 Q3MHP1::Ubiquitin-conjugating enzyme E2 L3 ::Ubiquitin-conjugating enzyme E2 that specifically acts with HECT-type and RBR family E3 ubiquitin-protein ligases. Does not function with most RING-containing E3 ubiquitin-protein ligases because it lacks intrinsic E3-independent reactivity with lysine: in contrast, it has activity with the RBR family E3 enzymes, such as PARK2 and ARIH1, that function like function like RING-HECT hybrids. Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-11'-linked polyubiquitination. Involved in the selective degradation of short-lived and abnormal proteins. Down-regulated during the S-phase it is involved in progression through the cell cycle. Regulates nuclear hormone receptors transcriptional activity. May play a role in myelopoiesis.::Bos taurus (taxid: 9913) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 100.00::22-169 PF00179::UQ_con 100.00::25-164 GO:0071385::cellular response to glucocorticoid stimulus very confident rp_1c4z_D_1::62-174 very confident psy13700 166 Q5E953::Ubiquitin-fold modifier-conjugating enzyme 1 ::E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage.::Bos taurus (taxid: 9913) very confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 99.72::28-127 PF08694::UFC1 100.00::3-163 GO:0071568::UFM1 conjugating enzyme activity very confident hh_3kpa_A_1::1-160 very confident psy18020 434 Q61187::Tumor susceptibility gene 101 protein ::Component of the ESCRT-I complex, a regulator of vesicular trafficking process. Binds to ubiquitinated cargo proteins and is required for the sorting of endocytic ubiquitinated cargos into multivesicular bodies (MVBs). Mediates the association between the ESCRT-0 and ESCRT-I complex. Required for completion of cytokinesis; the function requires CEP55. May be involved in cell growth and differentiation. Acts as a negative growth regulator.::Mus musculus (taxid: 10090) confident COG5078::Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones] 94.96::4-78 PF09454::Vps23_core 99.96::361-425 GO:0009987::cellular process confident hh_2p22_A_1::276-351,353-430 very confident psy10576 151 Q9U3V9::Protein xmas-2 ::Required for spermatogenesis, oogenesis and embryogenesis.::Drosophila melanogaster (taxid: 7227) portable COG5079::SAC3 Nuclear protein export factor [Intracellular trafficking and secretion / Cell division and chromosome partitioning] 100.00::8-147 PF03399::SAC3_GANP 100.00::10-151 GO:0005635::nuclear envelope confident hh_3t5v_A_1::11-62,64-151 very confident psy15048 207 A6QLC6::Protein YIPF6 ::::Bos taurus (taxid: 9913) confident COG5080::YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion] 100.00::40-203 PF04893::Yip1 98.13::49-184 GO:0005783::endoplasmic reticulum confident no hit no match psy16302 273 Q54TS4::Protein YIPF1 homolog ::::Dictyostelium discoideum (taxid: 44689) confident COG5080::YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion] 99.03::67-228 PF04893::Yip1 99.03::65-228 GO:0030133::transport vesicle confident no hit no match psy1673 161 Q5XID0::Protein YIPF5 ::Plays a role in transport between endoplasmic reticulum and Golgi.::Rattus norvegicus (taxid: 10116) confident COG5080::YIP1 Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking and secretion] 99.78::29-161 PF04893::Yip1 93.17::12-76 GO:0042175::nuclear outer membrane-endoplasmic reticulum membrane network confident no hit no match psy16574 152 O42395::Cellular nucleic acid-binding protein ::Single stranded DNA-binding protein, with specificity to the sterol regulatory element (SRE). Involved in sterol-mediated repression.::Gallus gallus (taxid: 9031) confident COG5082::AIR1 Arginine methyltransferase-interacting protein, contains RING Zn-finger [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 99.90::36-151 PF00098::zf-CCHC 98.37::132-148 GO:0003697::single-stranded DNA binding confident hh_2lli_A_1::37-55,58-74,77-149 very confident psy16623 93 P03354::Gag-Pro-Pol polyprotein ::The aspartyl protease mediates proteolytic cleavages of Gag and Gag-Pol polyproteins during or shortly after the release of the virion from the plasma membrane. Cleavages take place as an ordered, step-wise cascade to yield mature proteins. This process is called maturation. Displays maximal activity during the budding process just prior to particle release from the cell.::Gallus gallus (taxid: 9031) portable COG5082::AIR1 Arginine methyltransferase-interacting protein, contains RING Zn-finger [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion] 98.90::40-88 PF00098::zf-CCHC 98.63::73-89 GO:0043229::intracellular organelle confident hh_2lli_A_1::41-90 very confident psy4654 559 P43125::Protein retinal degeneration B ::May control phosphatidylinositol concentration in transport vesicles from the subrhabdomeric cisternae (SRC) to the rhabdomere. May function as a calcium transporter.::Drosophila melanogaster (taxid: 7227) confident COG5083::SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] 100.00::273-530 PF08235::LNS2 100.00::379-510 GO:0008525::phosphatidylcholine transporter activity confident hh_3mn1_A_1::376-404,407-430,434-444,447-447,449-450,452-455,461-495 confident psy12533 567 Q9BQK8::Phosphatidate phosphatase LPIN3 ::Regulates fatty acid metabolism. Magnesium-dependent phosphatidate phosphatase enzyme which catalyzes the conversion of phosphatidic acid to diacylglycerol during triglyceride, phosphatidylcholine and phosphatidylethanolamine biosynthesis.::Homo sapiens (taxid: 9606) confident COG5083::SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] 100.00::32-268 PF08235::LNS2 100.00::360-516 GO:0042826::histone deacetylase binding confident hh_2p9j_A_2::83-100,104-139,143-150,156-160,170-173,179-186,192-204,206-225 confident psy4296 103 Q8BQZ5::Cleavage and polyadenylation specificity factor subunit 4 ::Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. CPSF4 binds RNA polymers with a preference for poly(U).::Mus musculus (taxid: 10090) confident COG5084::YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only] 98.94::21-96 PF00642::zf-CCCH 98.22::32-55 GO:0004521::endoribonuclease activity confident hh_2rhk_C_1::27-88 very confident psy4297 69 Q8BQZ5::Cleavage and polyadenylation specificity factor subunit 4 ::Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. CPSF4 binds RNA polymers with a preference for poly(U).::Mus musculus (taxid: 10090) confident COG5084::YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only] 90.52::28-61 PF00642::zf-CCCH 97.76::38-61 GO:0005847::mRNA cleavage and polyadenylation specificity factor complex confident hh_3d2n_A_1::38-62 portable psy2466 224 Q499W2::DNA replication complex GINS protein SLD5 ::The GINS complex plays an essential role in the initiation of DNA replication, and progression of DNA replication forks. SLD5 is important for GINS complex assembly. GINS complex seems to bind preferentially to single-stranded DNA.::Rattus norvegicus (taxid: 10116) confident COG5086::Uncharacterized conserved protein [Function unknown] 100.00::26-224 PF05916::Sld5 97.82::87-130 GO:0043138::3'-5' DNA helicase activity confident hh_2e9x_D_1::9-224 very confident psy8635 177 Q6DH26::Mediator of RNA polymerase II transcription subunit 31 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Danio rerio (taxid: 7955) very confident COG5088::SOH1 Rad5p-binding protein [General function prediction only] 100.00::12-111 PF05669::Med31 100.00::13-113 GO:0006461::protein complex assembly very confident hh_3fbi_B_1::9-80,82-106 very confident psy15249 235 P41900::General transcription factor IIF subunit 2 ::TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity.::Drosophila melanogaster (taxid: 7227) confident COG5090::TFG2 Transcription initiation factor IIF, small subunit (RAP30) [Transcription] 100.00::25-226 PF02270::TFIIF_beta 100.00::25-218 GO:0060261::positive regulation of transcription initiation from RNA polymerase II promoter confident hh_1f3u_A_1::22-69,71-116,128-145 very confident psy6601 459 Q5ZML4::Cysteine and histidine-rich domain-containing protein 1 ::Regulates centrosome duplication.::Gallus gallus (taxid: 9031) portable COG5091::SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only] 97.06::218-314 PF04968::CHORD 99.98::84-147 GO:0008270::zinc ion binding confident hh_2xcm_E_1::79-148 very confident psy5240 97 P28707::Co-chaperone protein SBA1 ::Acts as a co-chaperone.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5091::SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only] 98.61::6-94 PF04969::CS 99.87::5-79 GO:0005737::cytoplasm confident hh_2kmw_A_1::1-62,64-81,84-94 very confident psy15003 317 P83868::Prostaglandin E synthase 3 ::Molecular chaperone that localizes to genomic response elements in a hormone-dependent manner and disrupts receptor-mediated transcriptional activation, by promoting disassembly of transcriptional regulatory complexes.::Rattus norvegicus (taxid: 10116) portable COG5091::SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only] 98.63::178-296 PF04969::CS 99.64::182-257 GO:0044444::cytoplasmic part confident hh_2kmw_A_2::179-219,221-240,242-259,262-295 very confident psy5485 384 Q9SUR9::Protein SGT1 homolog A ::Functions in R gene-mediated resistance, but participates in a lower extent than SGT1B to RPP5-mediated resistance. Not required for RPM1, RPS2, RPS4 and RPS5-mediated resistance. Probably required for SCF-mediated ubiquitination, by coupling HSP90 to SCF complex for ubiquitination of HSP90 client proteins.::Arabidopsis thaliana (taxid: 3702) portable COG5091::SGT1 Suppressor of G2 allele of skp1 and related proteins [General function prediction only] 100.00::194-382 PF05002::SGS 100.00::306-382 GO:0005737::cytoplasm confident hh_1rl1_A_1::198-243,246-293 very confident psy14920 586 P67775::Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform ::PP2A can modulate the activity of phosphorylase B kinase casein kinase 2, mitogen-stimulated S6 kinase, and MAP-2 kinase. Cooperates with SGOL2 to protect centromeric cohesin from separase-mediated cleavage in oocytes specifically during meiosis I (By similarity). Can dephosphorylate SV40 large T antigen and p53/TP53. Dephosphorylates SV40 large T antigen, preferentially on serine residues 120, 123, 677, and perhaps 679. The C subunit was most active, followed by the AC form, which was more active than the ABC form, and activity of all three forms was strongly stimulated by manganese, and to a lesser extent by magnesium. Dephosphorylation by the AC form, but not C or ABC form is inhibited by small T antigen. Activates RAF1 by dephosphorylating it at 'Ser-259'.::Homo sapiens (taxid: 9606) very confident COG5092::NMT1 N-myristoyl transferase [Lipid metabolism] 100.00::36-351 PF01233::NMT 100.00::79-228 GO:0046580::negative regulation of Ras protein signal transduction very confident hh_2ie4_C_1::320-585 very confident psy14931 106 Q5RAF3::Glycylpeptide N-tetradecanoyltransferase 1 ::Adds a myristoyl group to the N-terminal glycine residue of certain cellular and viral proteins.::Pongo abelii (taxid: 9601) confident COG5092::NMT1 N-myristoyl transferase [Lipid metabolism] 100.00::2-106 PF02799::NMT_C 100.00::2-105 GO:0005794::Golgi apparatus very confident hh_1rxt_A_1::2-106 very confident psy14938 96 Q9UVX3::Glycylpeptide N-tetradecanoyltransferase ::Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) confident COG5092::NMT1 N-myristoyl transferase [Lipid metabolism] 100.00::1-96 PF02799::NMT_C 100.00::1-95 GO:0005794::Golgi apparatus very confident hh_1rxt_A_1::1-96 very confident psy14934 87 Q5RAF3::Glycylpeptide N-tetradecanoyltransferase 1 ::Adds a myristoyl group to the N-terminal glycine residue of certain cellular and viral proteins.::Pongo abelii (taxid: 9601) confident COG5092::NMT1 N-myristoyl transferase [Lipid metabolism] 98.77::42-86 no hit no match GO:0005794::Golgi apparatus confident hh_1rxt_A_1::4-18,25-86 very confident psy15258 265 Q9VQY9::Probable DNA replication complex GINS protein PSF2 ::The GINS complex plays an essential role in the initiation of DNA replication.::Drosophila melanogaster (taxid: 7227) confident COG5093::Uncharacterized conserved protein [Function unknown] 100.00::1-176 PF05916::Sld5 99.77::43-154 GO:0005829::cytosol confident hh_2e9x_B_1::1-23,25-89,91-177 very confident psy647 190 Q9VQY9::Probable DNA replication complex GINS protein PSF2 ::The GINS complex plays an essential role in the initiation of DNA replication.::Drosophila melanogaster (taxid: 7227) very confident COG5093::Uncharacterized conserved protein [Function unknown] 100.00::1-175 PF05916::Sld5 99.83::43-154 GO:0005829::cytosol confident hh_2e9x_B_1::1-23,25-177 very confident psy8542 182 Q16594::Transcription initiation factor TFIID subunit 9 ::Essential for cell viability. TAF9 and TAF9B are involved in transcriptional activation as well as repression of distinct but overlapping sets of genes. May have a role in gene regulation associated with apoptosis. TAFs are components of the transcription factor IID (TFIID) complex, the TBP-free TAFII complex (TFTC), the PCAF histone acetylase complex and the STAGA transcription coactivator-HAT complex. TFIID or TFTC are essential for the regulation of RNA polymerase II-mediated transcription.::Homo sapiens (taxid: 9606) portable COG5094::TAF9 Transcription initiation factor TFIID, subunit TAF9 (also component of histone acetyltransferase SAGA) [Transcription] 100.00::14-181 PF02291::TFIID-31kDa 100.00::6-181 GO:0070461::SAGA-type complex confident hh_1ku5_A_1::67-125 very confident psy11212 448 P49848::Transcription initiation factor TFIID subunit 6 ::TAFs are components of the transcription factor IID (TFIID) complex, PCAF histone acetylase complex and TBP-free TAFII complex (TFTC). TIIFD is multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors.::Homo sapiens (taxid: 9606) confident COG5095::TAF6 Transcription initiation factor TFIID, subunit TAF6 (also component of histone acetyltransferase SAGA) [Transcription] 100.00::6-448 PF07571::DUF1546 99.93::369-447 GO:0005829::cytosol confident hh_4atg_A_1::274-294,298-332,335-381,389-447 very confident psy8268 61 Q13367::AP-3 complex subunit beta-2 ::Subunit of non-clathrin- and clathrin-associated adaptor protein complex 3 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. AP-3 appears to be involved in the sorting of a subset of transmembrane proteins targeted to lysosomes and lysosome-related organelles.::Homo sapiens (taxid: 9606) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 93.16::5-51 PF01602::Adaptin_N 97.81::4-51 GO:0005730::nucleolus very confident hh_2vgl_B_1::4-53 very confident psy8267 645 Q13367::AP-3 complex subunit beta-2 ::Subunit of non-clathrin- and clathrin-associated adaptor protein complex 3 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. AP-3 appears to be involved in the sorting of a subset of transmembrane proteins targeted to lysosomes and lysosome-related organelles.::Homo sapiens (taxid: 9606) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 100.00::2-490 PF01602::Adaptin_N 100.00::2-495 GO:0005794::Golgi apparatus confident hh_2vgl_B_1::2-192,199-201,242-460,462-533 very confident psy17939 81 Q5R922::Coatomer subunit beta ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. Plays a functional role in facilitating the transport of kappa-type opioid receptor mRNAs into axons and enhances translation of these proteins. Required for limiting lipid storage in lipid droplets. Involved in lipid homeostasis by regulating the presence of perilipin family members PLIN2 and PLIN3 at the lipid droplet surface and promoting the association of adipocyte surface triglyceride lipase (PNPLA2) with the lipid droplet to mediate lipolysis. Involved in the Golgi disassembly and reassembly processes during cell cycle. Involved in autophagy by playing a role in early endosome function. Plays a role in organellar compartmentalization of secretory compartments including endoplasmic reticulum (ER)-Golgi intermediate compartment (ERGIC), Golgi, trans-Golgi network (TGN) and recycling endosomes, and in biosynthetic transport of CAV1. Promotes degradation of Nef cellular targets CD4 and MHC class I antigens by facilitating their trafficking to degradative compartments.::Pongo abelii (taxid: 9601) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 99.76::4-79 PF01602::Adaptin_N 99.21::2-70 GO:0010883::regulation of lipid storage confident hh_3tjz_B_1::3-6,8-67,74-81 confident psy2915 883 O81742::Beta-adaptin-like protein C ::Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.::Arabidopsis thaliana (taxid: 3702) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 100.00::11-484 PF01602::Adaptin_N 100.00::14-483 GO:0016192::vesicle-mediated transport confident hh_2vgl_B_1::1-90,121-485 very confident psy4020 530 Q5R5M2::AP-1 complex subunit gamma-1 ::Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.::Pongo abelii (taxid: 9601) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 100.00::6-343 PF01602::Adaptin_N 100.00::8-378 GO:0016192::vesicle-mediated transport confident hh_1w63_A_1::2-343,350-375 very confident psy11028 136 O14617::AP-3 complex subunit delta-1 ::Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes.::Homo sapiens (taxid: 9606) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 99.39::3-135 PF01602::Adaptin_N 99.87::2-134 GO:0043195::terminal bouton confident hh_2vgl_A_1::1-122 very confident psy11027 252 O14617::AP-3 complex subunit delta-1 ::Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes.::Homo sapiens (taxid: 9606) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 99.66::1-104 PF01602::Adaptin_N 99.97::1-239 GO:0043195::terminal bouton confident hh_2vgl_A_1::1-155,157-240 very confident psy17474 343 Q9BZZ5::Apoptosis inhibitor 5 ::Antiapoptotic factor that may have a role in protein assembly. Negatively regulates ACIN1. By binding to ACIN1, it suppresses ACIN1 cleavage from CASP3 and ACIN1-mediated DNA fragmentation. Also known to efficiently suppress E2F1-induced apoptosis. Its depletion enhances the cytotoxic action of the chemotherapeutic drugs.::Homo sapiens (taxid: 9606) portable COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 90.06::4-74 PF05918::API5 100.00::2-265 GO:0005730::nucleolus confident hh_3u0r_A_1::2-33,36-220,224-265,270-274 very confident psy1396 66 Q5R922::Coatomer subunit beta ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. Plays a functional role in facilitating the transport of kappa-type opioid receptor mRNAs into axons and enhances translation of these proteins. Required for limiting lipid storage in lipid droplets. Involved in lipid homeostasis by regulating the presence of perilipin family members PLIN2 and PLIN3 at the lipid droplet surface and promoting the association of adipocyte surface triglyceride lipase (PNPLA2) with the lipid droplet to mediate lipolysis. Involved in the Golgi disassembly and reassembly processes during cell cycle. Involved in autophagy by playing a role in early endosome function. Plays a role in organellar compartmentalization of secretory compartments including endoplasmic reticulum (ER)-Golgi intermediate compartment (ERGIC), Golgi, trans-Golgi network (TGN) and recycling endosomes, and in biosynthetic transport of CAV1. Promotes degradation of Nef cellular targets CD4 and MHC class I antigens by facilitating their trafficking to degradative compartments.::Pongo abelii (taxid: 9601) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 98.53::5-66 PF07718::Coatamer_beta_C 100.00::5-66 GO:0005829::cytosol confident hh_1kyf_A_1::6-55 portable psy18155 185 Q5R6L5::Cullin-associated NEDD8-dissociated protein 1 ::Enhances transcription from various types of promoters. Regulatory protein that interferes with the assembly of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex and thereby down-regulates ubiquitination of target proteins. Prevents neddylation of CUL1 by physically blocking access to the neddylation site. Disrupts interactions between CUL1 and SKP1 and between CUL1 and F-box proteins.::Pongo abelii (taxid: 9601) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 92.89::18-138 PF08623::TIP120 99.42::81-174 GO:0030154::cell differentiation confident hh_1u6g_C_1::1-122,124-174 very confident psy6156 176 Q99JD4::CLIP-associating protein 2 ::Microtubule plus-end tracking protein that promotes the stabilization of dynamic microtubules. Involved in the nucleation of noncentrosomal microtubules originating from the trans-Golgi network (TGN). Required for the polarization of the cytoplasmic microtubule arrays in migrating cells towards the leading edge of the cell. May act at the cell cortex to enhance the frequency of rescue of depolymerizing microtubules by attaching their plus-ends to cortical platforms composed of ERC1 and PHLDB2. This cortical microtubule stabilizing activity is regulated at least in part by phosphatidylinositol 3-kinase signaling. Also performs a similar stabilizing function at the kinetochore which is essential for the bipolar alignment of chromosomes on the mitotic spindle. Acts as a mediator of ERBB2-dependent stabilization of microtubules at the cell cortex.::Rattus norvegicus (taxid: 10116) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 97.21::18-119 PF12348::CLASP_N 99.37::2-143 GO:0005876::spindle microtubule confident hh_2qk1_A_1::2-149 confident psy13759 114 P36179::Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit ::The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of the catalytic subunit and a variable regulatory B subunit.::Drosophila melanogaster (taxid: 7227) confident COG5096::Vesicle coat complex, various subunits [Intracellular trafficking and secretion] 96.77::8-85 PF12755::Vac14_Fab1_bd 98.97::10-75 GO:0005829::cytosol confident bp_1b3u_A_1::22-90 very confident psy7121 79 Q6IQ63::Mediator of RNA polymerase II transcription subunit 6 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Danio rerio (taxid: 7955) confident COG5097::MED6 RNA polymerase II transcriptional regulation mediator [Transcription] 99.90::10-78 PF04934::Med6 99.97::8-78 GO:0003713::transcription coactivator activity confident hh_4h61_A_1::9-78 very confident psy7128 2056 Q6C3T0::Mediator of RNA polymerase II transcription subunit 6 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) portable COG5097::MED6 RNA polymerase II transcriptional regulation mediator [Transcription] 99.97::149-315 PF14222::MOR2-PAG1_N 100.00::716-1415 GO:0005634::nucleus confident hh_4h61_A_1::149-165,177-209,217-217,219-223,226-321 very confident psy8182 827 Q8K2Z4::Condensin complex subunit 1 ::Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. May target the condensin complex to DNA via its C-terminal domain.::Mus musculus (taxid: 10090) portable COG5098::Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics / Cell division and chromosome partitioning] 100.00::37-455 PF12922::Cnd1_N 100.00::497-671 GO:0005634::nucleus confident hh_1qgr_A_1::168-184,190-214,221-352,359-421,423-447,450-451,458-506,508-510,514-522,525-561,563-577,587-587,589-589,591-592,594-609,611-616,623-640,646-778,781-781,785-824 confident psy15035 816 Q15397::Pumilio domain-containing protein KIAA0020 ::::Homo sapiens (taxid: 9606) portable COG5099::RNA-binding protein of the Puf family, translational repressor [Translation, ribosomal structure and biogenesis] 99.97::5-367 PF08144::CPL 99.96::266-458 GO:0005794::Golgi apparatus confident hh_2a4d_A_1::521-595,597-603,607-615,617-640 very confident psy8916 520 Q9VBP9::Nuclear protein localization protein 4 homolog ::May be part of a complex that binds ubiquitinated proteins and that is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome.::Drosophila melanogaster (taxid: 7227) confident COG5100::NPL4 Nuclear pore protein [Nuclear structure] 100.00::174-520 PF05020::zf-NPL4 100.00::297-437 GO:0005829::cytosol confident hh_2pjh_A_1::174-183,185-248 very confident psy4090 112 Q6P5F9::Exportin-1 ::Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES) and of RNAs. In the nucleus, in association with RANBP3, binds cooperatively to the NES on its target protein and to the GTPase Ran in its active GTP-bound form. Docking of this complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of an nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from the export receptor. The directionality of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Involved in U3 snoRNA transport from Cajal bodies to nucleoli. Binds to late precursor U3 snoRNA bearing a TMG cap.::Mus musculus (taxid: 10090) confident COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 99.95::11-105 PF03810::IBN_N 99.38::44-106 GO:0019904::protein domain specific binding confident hh_3gjx_A_1::2-7,9-106 very confident psy13179 352 Q6P5F9::Exportin-1 ::Mediates the nuclear export of cellular proteins (cargos) bearing a leucine-rich nuclear export signal (NES) and of RNAs. In the nucleus, in association with RANBP3, binds cooperatively to the NES on its target protein and to the GTPase Ran in its active GTP-bound form. Docking of this complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of an nuclear export complex into the cytoplasm, disassembling of the complex and hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively) cause release of the cargo from the export receptor. The directionality of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Involved in U3 snoRNA transport from Cajal bodies to nucleoli. Binds to late precursor U3 snoRNA bearing a TMG cap.::Mus musculus (taxid: 10090) confident COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 100.00::11-346 PF08389::Xpo1 99.93::122-266 GO:0005642::annulate lamellae confident hh_3gjx_A_1::10-274,277-341 very confident psy13058 238 Q6P2B1::Transportin-3 ::Seems to function in nuclear protein import as nuclear transport receptor. In vitro, mediates the nuclear import of splicing factor SR proteins RBM4, SFRS1 and SFRS2, by recognizing phosphorylated RS domains.::Mus musculus (taxid: 10090) portable COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 99.87::4-237 PF08389::Xpo1 99.75::116-233 GO:0005730::nucleolus confident hh_2x19_B_1::5-52,68-114,116-237 very confident psy46 660 Q5ZLT0::Exportin-7 ::Mediates the nuclear export of proteins (cargos) with broad substrate specificity.::Gallus gallus (taxid: 9031) confident COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 99.96::1-302 PF08389::Xpo1 99.04::107-294 GO:0006611::protein export from nucleus confident hh_3ibv_A_1::2-66,70-70,84-128,135-171,175-211,220-243,265-280,283-303,307-317,320-354,357-380,383-425,427-436,438-482,486-488,491-493,497-500,502-512,514-529,531-533,535-543,547-549,552-574 confident psy12900 344 Q6P2B1::Transportin-3 ::Seems to function in nuclear protein import as nuclear transport receptor. In vitro, mediates the nuclear import of splicing factor SR proteins RBM4, SFRS1 and SFRS2, by recognizing phosphorylated RS domains.::Mus musculus (taxid: 10090) portable COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 95.49::80-329 PF08767::CRM1_C 99.39::78-334 GO:0005730::nucleolus confident hh_2x19_B_1::32-138,141-210,230-287,289-291,295-342 very confident psy6178 912 Q6P2B1::Transportin-3 ::Seems to function in nuclear protein import as nuclear transport receptor. In vitro, mediates the nuclear import of splicing factor SR proteins RBM4, SFRS1 and SFRS2, by recognizing phosphorylated RS domains.::Mus musculus (taxid: 10090) confident COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 100.00::4-909 PF08767::CRM1_C 99.55::658-911 GO:0005737::cytoplasm confident hh_2x19_B_1::1-2,4-55,58-101,103-230,232-285,288-311,314-397,399-451,453-579,582-718,721-790,810-871,878-912 very confident psy4089 223 Q9TVM2::Exportin-1 ::Receptor for the leucine-rich nuclear export signal (NES). Binds cooperatively to the NES on its target protein and to the small GTPase Ran in its active GTP-bound form. Required for the function or maintenance of certain tissues such as brain and gut. Involved in the export of dl from the nucleus to the cytoplasm.::Drosophila melanogaster (taxid: 7227) confident COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 100.00::1-212 PF08767::CRM1_C 100.00::1-195 GO:0005829::cytosol confident hh_1w9c_A_1::1-76,78-195 very confident psy4087 249 Q9TVM2::Exportin-1 ::Receptor for the leucine-rich nuclear export signal (NES). Binds cooperatively to the NES on its target protein and to the small GTPase Ran in its active GTP-bound form. Required for the function or maintenance of certain tissues such as brain and gut. Involved in the export of dl from the nucleus to the cytoplasm.::Drosophila melanogaster (taxid: 7227) confident COG5101::CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] 100.00::3-248 no hit no match GO:0005829::cytosol confident hh_3gjx_A_1::4-54,57-62,68-248 very confident psy1277 1312 A1A5H6::CCR4-NOT transcription complex subunit 1 ::Belongs to the CCR4-NOT complex that functions as general transcription regulation complex. Acts as a transcriptional repressor. Represses the ligand-dependent transcriptional activation by nuclear receptors.::Danio rerio (taxid: 7955) confident COG5103::CDC39 Cell division control protein, negative regulator of transcription [Cell division and chromosome partitioning / Transcription] 100.00::2-1310 PF04054::Not1 100.00::995-1310 GO:0033147::negative regulation of intracellular estrogen receptor signaling pathway confident hh_4gmj_A_1::1-150,160-188 very confident psy1281 144 A1A5H6::CCR4-NOT transcription complex subunit 1 ::Belongs to the CCR4-NOT complex that functions as general transcription regulation complex. Acts as a transcriptional repressor. Represses the ligand-dependent transcriptional activation by nuclear receptors.::Danio rerio (taxid: 7955) very confident COG5103::CDC39 Cell division control protein, negative regulator of transcription [Cell division and chromosome partitioning / Transcription] 100.00::3-114 PF04054::Not1 100.00::1-112 GO:0033147::negative regulation of intracellular estrogen receptor signaling pathway very confident hh_1mhq_A_1::13-85,91-96,98-108 portable psy2339 125 Q5BDP1::E3 ubiquitin-protein ligase RSP5 ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Probably involved in the regulatory network controlling carbon source utilization. Ubiquitinates 'Lys-528' of the uric acid/xanthine transporter uapA at the cell membrane, leading to its internalization, sorting into the endosomal pathway to the vacuolar lumen where it is eventually degraded.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG5104::PRP40 Splicing factor [RNA processing and modification] 99.08::29-105 PF00397::WW 99.35::73-102 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_1tk7_A_1::20-63,66-104 very confident psy14127 76 P39940::E3 ubiquitin-protein ligase RSP5 ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Component of a RSP5 ubiquitin ligase complex which specifies polyubiquitination and intracellular trafficking of the general amino acid permease GAP1 as well as other cell surface proteins like GAP1, FUR4, MAL61, PMA1 and STE2. The RSP5-BUL1/2 complex is also necessary for the heat-shock element (HSE)-mediated gene expression, nitrogen starvation GLN3-dependent transcription, pressure-induced differential regulation of the two tryptophan permeases TAT1 and TAT2 and sorting efficiency into multivesicular bodies. Also acts on RBP1. Plays a role in tolerance to o-dinitrobenzene. Involved in actin cytoskeleton organization and dynamics. Ubiquitinates the LAS17-binding proteins LSB1 and PIN3/LSB2 without directing them for degradation and affects LAS17 levels in a SLA1-dependent and LSB1/2-independent manner.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5104::PRP40 Splicing factor [RNA processing and modification] 93.26::12-66 PF00397::WW 99.13::8-37 GO:0016477::cell migration confident hh_2jmf_A_1::4-41 very confident psy8387 176 Q9HAU4::E3 ubiquitin-protein ligase SMURF2 ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Interacts with SMAD1 and SMAD7 in order to trigger their ubiquitination and proteasome-dependent degradation. In addition, interaction with SMAD7 activates autocatalytic degradation, which is prevented by interaction with SCYE1. Forms a stable complex with the TGF-beta receptor-mediated phosphorylated SMAD2 and SMAD3. In this way, SMAD2 may recruit substrates, such as SNON, for ubiquitin-mediated degradation. Enhances the inhibitory activity of SMAD7 and reduces the transcriptional activity of SMAD2. Coexpression of SMURF2 with SMAD1 results in considerable decrease in steady-state level of SMAD1 protein and a smaller decrease of SMAD2 level.::Homo sapiens (taxid: 9606) confident COG5104::PRP40 Splicing factor [RNA processing and modification] 98.66::82-160 PF00397::WW 99.20::126-155 GO:0030154::cell differentiation confident hh_2kyk_A_1::123-158 very confident psy9283 242 Q8CGF7::Transcription elongation regulator 1 ::Transcription factor that binds RNA polymerase II and inhibits the elongation of transcripts from target promoters. Regulates transcription elongation in a TATA box-dependent manner.::Mus musculus (taxid: 10090) confident COG5104::PRP40 Splicing factor [RNA processing and modification] 99.82::20-201 PF01846::FF 99.18::76-127 GO:0001106::RNA polymerase II transcription corepressor activity confident hh_2dof_A_1::22-82 very confident psy1013 258 P20483::M-phase inducer phosphatase ::This protein functions as a dosage-dependent inducer in mitotic control. It is a tyrosine protein phosphatase required for progression of the cell cycle. It may directly dephosphorylate p34(cdc2) and activate the p34(cdc2) kinase activity.::Drosophila melanogaster (taxid: 7227) confident COG5105::MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning] 99.96::22-246 PF00581::Rhodanese 99.79::36-155 GO:0000278::mitotic cell cycle confident hh_3op3_A_1::1-24,26-79,81-91,94-161,214-245 very confident psy8681 521 Q54XP4::Crooked neck-like protein 1 ::Involved in pre-mRNA splicing.::Dictyostelium discoideum (taxid: 44689) portable COG5107::RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] 99.75::53-415 PF13429::TPR_15 99.69::87-378 GO:0005681::spliceosomal complex confident hh_2ooe_A_1::50-102,105-225,227-309,311-360,364-383,386-414 very confident psy6461 703 Q5BH69::Pre-mRNA-splicing factor syf1 ::Involved in pre-mRNA splicing and cell cycle progression.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) confident COG5107::RNA14 Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor [RNA processing and modification] 99.91::2-663 PF13429::TPR_15 99.78::365-685 GO:0006351::transcription, DNA-dependent confident hh_2ooe_A_2::13-61,63-78,86-134,136-157,159-166,184-200,270-302,351-353,365-383,390-426,431-463,480-497,533-549,552-585,588-656 very confident psy11905 317 Q9D7M1::Glucose-induced degradation protein 8 homolog ::::Mus musculus (taxid: 10090) confident COG5109::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 99.86::21-283 PF10607::CLTH 99.96::63-203 GO:0005829::cytosol confident hh_1uuj_A_1::25-57 portable psy16822 97 Q5R532::Macrophage erythroblast attacher ::Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.::Pongo abelii (taxid: 9601) confident COG5109::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 98.23::56-96 PF13445::zf-RING_UBOX 98.39::69-96 GO:0016363::nuclear matrix confident hh_1t1h_A_1::65-77,81-95 portable psy2630 472 Q54NC6::Anaphase-promoting complex subunit 1 ::Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.::Dictyostelium discoideum (taxid: 44689) portable COG5110::RPN1 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 99.73::68-291 PF01851::PC_rep 97.35::81-108 GO:0005634::nucleus confident hh_4ady_A_1::77-108,122-122,126-162,168-210,220-223,225-250 confident psy6263 913 Q4FZT9::26S proteasome non-ATPase regulatory subunit 2 ::Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Rattus norvegicus (taxid: 10116) very confident COG5110::RPN1 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 100.00::5-913 PF01851::PC_rep 97.71::462-491 GO:0005829::cytosol confident hh_4ady_A_1::38-68,79-97,99-115,117-286,297-302,306-306,310-335,337-373,376-439,443-492,495-527,533-603,649-652,654-657,660-670,674-809,819-855 very confident psy521 173 Q9VD25::Probable DNA-directed RNA polymerase III subunit RPC6 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.::Drosophila melanogaster (taxid: 7227) confident COG5111::RPC34 DNA-directed RNA polymerase III, subunit C34 [Transcription] 100.00::27-173 PF05158::RNA_pol_Rpc34 100.00::25-173 GO:0005634::nucleus confident hh_2w57_A_1::101-115,119-154 portable psy7778 117 Q9VD25::Probable DNA-directed RNA polymerase III subunit RPC6 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.::Drosophila melanogaster (taxid: 7227) confident COG5111::RPC34 DNA-directed RNA polymerase III, subunit C34 [Transcription] 99.97::2-107 PF05158::RNA_pol_Rpc34 100.00::3-105 GO:0005654::nucleoplasm confident hh_2dk5_A_1::17-83 very confident psy12460 171 Q5ZMA2::Pre-mRNA-processing factor 19 ::Plays a role in DNA double-strand break (DSB) repair. Binds double-stranded DNA in a sequence-nonspecific manner. Acts as a structural component of the nuclear framework. May also serve as a support for spliceosome binding and activity.::Gallus gallus (taxid: 9031) confident COG5113::UFD2 Ubiquitin fusion degradation protein 2 [Posttranslational modification, protein turnover, chaperones] 97.43::5-59 PF08606::Prp19 100.00::69-138 GO:0048711::positive regulation of astrocyte differentiation confident hh_2bay_A_1::4-62 very confident psy1723 246 Q9HE05::Ubiquitin conjugation factor E4 ::E4 ubiquitin chain-elongation enzyme specifically involved in polyubiquitin chain assembly. Binds to cdc48 and elongates mono- and diubiquitinated ERAD substrates presented by the ufd1-npl4-cdc48 (UNC) AAA ATPase complex to a chain length of 4 to 6 ubiquitin moieties. Delivers these polyubiquitinated substrates to downstream ERAD components, which target them to the proteasome. Enhances ubiquitination at 'Lys-48', but not at 'Lys-29' of the Ub moiety.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5113::UFD2 Ubiquitin fusion degradation protein 2 [Posttranslational modification, protein turnover, chaperones] 100.00::18-244 PF10408::Ufd2P_core 100.00::5-155 GO:0005737::cytoplasm confident hh_3m62_A_1::5-96,102-120,123-245 very confident psy14915 1046 Q9HE05::Ubiquitin conjugation factor E4 ::E4 ubiquitin chain-elongation enzyme specifically involved in polyubiquitin chain assembly. Binds to cdc48 and elongates mono- and diubiquitinated ERAD substrates presented by the ufd1-npl4-cdc48 (UNC) AAA ATPase complex to a chain length of 4 to 6 ubiquitin moieties. Delivers these polyubiquitinated substrates to downstream ERAD components, which target them to the proteasome. Enhances ubiquitination at 'Lys-48', but not at 'Lys-29' of the Ub moiety.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5113::UFD2 Ubiquitin fusion degradation protein 2 [Posttranslational modification, protein turnover, chaperones] 100.00::109-1046 PF10408::Ufd2P_core 100.00::339-959 GO:0006915::apoptotic process confident hh_3m62_A_1::110-127,129-136,139-142,146-146,148-153,155-169,172-261,263-301,308-323,326-348,352-462,465-541,545-1046 very confident psy3219 102 O97592::Dystrophin ::Anchors the extracellular matrix to the cytoskeleton via F-actin. Ligand for dystroglycan. Component of the dystrophin-associated glycoprotein complex which accumulates at the neuromuscular junction (NMJ) and at a variety of synapses in the peripheral and central nervous systems and has a structural function in stabilizing the sarcolemma. Also implicated in signaling events and synaptic transmission.::Canis familiaris (taxid: 9615) confident COG5114::Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] 98.71::45-97 PF00569::ZZ 99.61::43-85 GO:0043043::peptide biosynthetic process confident hh_2e5r_A_1::36-95 very confident psy7971 276 Q86YT6::E3 ubiquitin-protein ligase MIB1 ::E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors. Probably mediates ubiquitination and subsequent proteasomal degradation of DAPK1, thereby antagonizing anti-apoptotic effects of DAPK1 to promote TNF-induced apoptosis (By similarity). Mediates 'Lys-63'-linked polyubiquitination of TBK1, which probably participates in kinase activation.::Homo sapiens (taxid: 9606) confident COG5114::Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] 97.83::85-139 PF06701::MIB_HERC2 99.96::157-224 GO:0007219::Notch signaling pathway confident hh_3dkm_A_1::142-185,192-222 very confident psy16233 464 Q5ZIJ9::E3 ubiquitin-protein ligase MIB2 ::E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors.::Gallus gallus (taxid: 9031) portable COG5114::Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] 97.30::76-127 PF06701::MIB_HERC2 99.87::7-68 GO:0030100::regulation of endocytosis confident hh_3dkm_A_1::2-49,51-65 very confident psy3216 547 O97592::Dystrophin ::Anchors the extracellular matrix to the cytoskeleton via F-actin. Ligand for dystroglycan. Component of the dystrophin-associated glycoprotein complex which accumulates at the neuromuscular junction (NMJ) and at a variety of synapses in the peripheral and central nervous systems and has a structural function in stabilizing the sarcolemma. Also implicated in signaling events and synaptic transmission.::Canis familiaris (taxid: 9615) portable COG5114::Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] 97.59::327-376 PF09068::EF-hand_2 100.00::98-230 GO:0005509::calcium ion binding confident hh_1eg3_A_1::63-76,79-82,84-150,152-165,172-182,187-202,204-214,219-237,246-322 very confident psy10031 218 Q86TJ2::Transcriptional adapter 2-beta ::Coactivates PAX5-dependent transcription together with either SMARCA4 or GCN5L2.::Homo sapiens (taxid: 9606) portable COG5114::Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics] 100.00::4-215 no hit no match GO:0005634::nucleus confident hh_2cqr_A_1::4-23 portable psy6893 988 Q5R5S4::26S proteasome non-ATPase regulatory subunit 1 ::Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Pongo abelii (taxid: 9601) confident COG5116::RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 100.00::29-729 PF01851::PC_rep 98.04::355-388 GO:0004175::endopeptidase activity confident hh_4ady_A_1::2-9,11-40,43-98,101-134,197-306,308-333,338-420,427-505,515-524,665-666,671-699,701-766 very confident psy5990 119 Q5R5S4::26S proteasome non-ATPase regulatory subunit 1 ::Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Pongo abelii (taxid: 9601) confident COG5116::RPN2 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 100.00::1-115 no hit no match GO:0005829::cytosol confident hh_4ady_A_1::1-102,105-114 very confident psy14430 497 Q5I0I8::Nucleolar complex protein 4 homolog ::::Rattus norvegicus (taxid: 10116) confident COG5117::NOC3 Protein involved in the nuclear export of pre-ribosomes [Translation, ribosomal structure and biogenesis / Intracellular trafficking and secretion] 100.00::3-441 PF03914::CBF 100.00::286-436 GO:0016021::integral to membrane confident rp_1vt4_I_1::129-142,148-164,169-178,181-188,199-216,219-227,237-237,239-262,265-361,364-387,392-405,422-442,446-448,451-459,461-467,473-482,488-496 portable psy2137 382 Q9BTC8::Metastasis-associated protein MTA3 ::Plays a role in maintenance of the normal epithelial architecture through the repression of SNAI1 transcription in a histone deacetylase-dependent manner, and thus the regulation of E-cadherin levels.::Homo sapiens (taxid: 9606) confident COG5118::BDP1 Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription] 93.16::156-200 PF01448::ELM2 99.64::308-363 GO:0005730::nucleolus very confident hh_2yqk_A_1::150-155,159-209 very confident psy4380 140 Q9CR60::Vesicle transport protein GOT1B ::May be involved in fusion of ER-derived transport vesicles with the Golgi complex.::Mus musculus (taxid: 10090) very confident COG5120::GOT1 Membrane protein involved in Golgi transport [Intracellular trafficking and secretion] 100.00::2-138 PF04178::Got1 99.71::9-128 GO:0007165::signal transduction very confident no hit no match psy16694 164 Q9Y296::Trafficking protein particle complex subunit 4 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Homo sapiens (taxid: 9606) confident COG5122::TRS23 Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 99.96::41-149 PF04099::Sybindin 100.00::26-149 GO:0005795::Golgi stack confident hh_2j3t_D_1::1-159 very confident psy15590 217 Q9Y296::Trafficking protein particle complex subunit 4 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Homo sapiens (taxid: 9606) very confident COG5122::TRS23 Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 100.00::102-208 PF04099::Sybindin 100.00::3-208 GO:0005795::Golgi stack very confident hh_2j3t_D_1::1-217 very confident psy16695 101 Q9Y296::Trafficking protein particle complex subunit 4 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Homo sapiens (taxid: 9606) confident COG5122::TRS23 Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 99.66::23-101 PF04099::Sybindin 99.83::23-100 GO:0005829::cytosol confident hh_2j3t_D_1::23-44,49-100 very confident psy2725 143 Q5NCF2::Trafficking protein particle complex subunit 1 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Mus musculus (taxid: 10090) very confident COG5122::TRS23 Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 100.00::1-137 PF04099::Sybindin 100.00::3-136 GO:0030008::TRAPP complex very confident hh_2j3t_C_1::1-142 very confident psy2728 139 Q5NCF2::Trafficking protein particle complex subunit 1 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Mus musculus (taxid: 10090) confident COG5122::TRS23 Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 99.88::32-139 PF04099::Sybindin 100.00::33-139 GO:0030008::TRAPP complex confident hh_2j3t_C_1::40-139 very confident psy7895 108 Q80ZM7::Transcription initiation factor IIA subunit 2 ::TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with TBP mediates transcriptional activity.::Mus musculus (taxid: 10090) very confident COG5123::TOA2 Transcription initiation factor IIA, gamma subunit [Transcription] 100.00::3-104 PF02751::TFIIA_gamma_C 99.95::51-101 GO:0005672::transcription factor TFIIA complex very confident hh_1nvp_D_1::2-59,61-106 very confident psy2296 208 Q8K396::Meiotic nuclear division protein 1 homolog ::Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Stimulates both DMC1- and RAD51-mediated homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks.::Mus musculus (taxid: 10090) confident COG5124::Protein predicted to be involved in meiotic recombination [Cell division and chromosome partitioning / General function prediction only] 100.00::1-208 PF03962::Mnd1 100.00::16-206 GO:0005829::cytosol confident hh_2htj_A_1::13-24,26-30,34-38,43-79 portable psy13946 90 P37236::Frequenin-1 ::Ca(2+)-dependent modulation of synaptic efficacy.::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 97.40::13-69 PF00036::EF-hand_1 98.61::19-44 GO:0005509::calcium ion binding confident hh_2l2e_A_1::9-59 very confident psy15330 60 P42325::Neurocalcin homolog ::Inhibits the phosphorylation of rhodopsin in a calcium-dependent manner. Probably binds two or three calcium ions.::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.03::14-44 PF00036::EF-hand_1 99.13::19-44 GO:0005829::cytosol confident bp_1bjf_A_1::1-59 very confident psy15328 76 P42325::Neurocalcin homolog ::Inhibits the phosphorylation of rhodopsin in a calcium-dependent manner. Probably binds two or three calcium ions.::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.37::25-74 PF00036::EF-hand_1 92.85::35-63 GO:0005829::cytosol confident bp_1bjf_A_1::35-75 very confident psy8741 62 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 90.15::32-56 PF00036::EF-hand_1 97.84::32-56 GO:0005875::microtubule associated complex confident hh_1k94_A_2::33-57 portable psy4977 63 P13832::Myosin regulatory light chain RLC-A ::Myosin regulatory subunit that plays an important role in regulation of both smooth muscle and nonmuscle cell contractile activity via its phosphorylation. Implicated in cytokinesis, receptor capping, and cell locomotion.::Rattus norvegicus (taxid: 10116) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.46::22-63 PF00036::EF-hand_1 98.97::35-63 GO:0031941::filamentous actin very confident hh_3j04_B_1::28-63 very confident psy384 101 Q06389::Calcium-binding protein NCS-1 ::Regulator of phosphatidylinositol 4-kinase PIK1.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.54::3-82 PF00036::EF-hand_1 98.89::46-74 GO:0043234::protein complex confident rp_1g8i_A_1::27-101 very confident psy8789 851 Q02158::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.::Dictyostelium discoideum (taxid: 44689) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.44::107-252 PF00388::PI-PLC-X 100.00::268-411 GO:0031090::organelle membrane confident hh_2oq1_A_1::497-509,512-522,524-558,560-588,592-627,632-632,635-690,692-753 very confident psy6933 4123 P13395::Spectrin alpha chain ::Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. Essential for larval survival and development. Stabilizes cell to cell interactions that are critical for the maintenance of cell shape and subcellular organization within embryonic tissues. Lva and spectrin may form a Golgi-based scaffold that mediates interaction of Golgi bodies with microtubules and facilitates Golgi-derived membrane secretion required for the formation of furrows during cellularization.::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.58::3554-3718 PF00435::Spectrin 98.64::2906-3008 GO:0005794::Golgi apparatus confident hh_1u4q_A_1::455-773 very confident psy12562 599 P18091::Alpha-actinin, sarcomeric ::F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. This is a bundling protein.::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.88::444-598 PF00435::Spectrin 99.39::102-206 GO:0051015::actin filament binding very confident hh_1quu_A_1::92-337 very confident psy14118 766 Q64691::Calpain-3 ::Calcium-regulated non-lysosomal thiol-protease.::Mus musculus (taxid: 10090) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.80::536-733 PF00648::Peptidase_C2 100.00::33-266 GO:0005509::calcium ion binding confident hh_1qxp_A_1::16-188,193-209,211-239,241-274,359-525,533-575,631-766 very confident psy13030 1218 Q07009::Calpain-2 catalytic subunit ::Calcium-regulated non-lysosomal thiol-protease which catalyze limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.::Rattus norvegicus (taxid: 10116) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.34::1123-1218 PF00648::Peptidase_C2 100.00::72-434 GO:0005856::cytoskeleton confident hh_1ziv_A_1::56-92,94-114,130-130,178-217,220-282,284-312,314-408,410-440 very confident psy1391 614 P35750::Calpain-1 catalytic subunit ::Calcium-regulated non-lysosomal thiol-protease which catalyze limited proteolysis of substrates involved in cytoskeletal remodeling and signal transduction.::Sus scrofa (taxid: 9823) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 92.77::457-568 PF00648::Peptidase_C2 100.00::5-285 GO:0005876::spindle microtubule confident hh_1qxp_A_1::5-47,50-163,187-215,217-229,231-258,260-293,298-444,447-450,453-502,509-582 very confident psy107 209 Q9VXH6::Calpain-C ::Not known; does not seem to have protease activity.::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.76::59-202 PF00648::Peptidase_C2 99.95::13-203 GO:0032502::developmental process confident hh_1qxp_A_1::1-8,12-133,135-135,137-138,140-203 very confident psy8382 864 Q96PH1::NADPH oxidase 5 ::Calcium-dependent NADPH oxidase that generates superoxide. Also functions as a calcium-dependent proton channel and may regulate redox-dependent processes in lymphocytes and spermatozoa. May play a role in cell growth and apoptosis. Isoform v2 and isoform v5 are involved in endothelial generation of reactive oxygen species (ROS), proliferation and angiogenesis and contribute to endothelial response to thrombin.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.68::123-252 PF01794::Ferric_reduct 99.33::337-475 GO:0044422::organelle part confident hh_2ggz_A_1::108-158,169-221,226-260 very confident psy13767 801 Q9UPN3::Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 ::Isoform 2 is a F-actin-binding protein which may play a role in cross-linking actin to other cytoskeletal proteins and also binds to microtubules. Plays an important role in ERBB2-dependent stabilization of microtubules at the cell cortex. Acts as a positive regulator of Wnt receptor signaling pathway and is involved in the translocation of AXIN1 and its associated complex (composed of APC, CTNNB1 and GSK3B) from the cytoplasm to the cell membrane. Has actin-regulated ATPase activity and is essential for controlling focal adhesions (FAs) assembly and dynamics. May play role in delivery of transport vesicles containing GPI-linked proteins from the trans-Golgi network through its interaction with GOLGA4. Plays a key role in wound healing and epidermal cell migration. Required for efficient upward migration of bulge cells in response to wounding and this function is primarily rooted in its ability to coordinate MT dynamics and polarize hair follicle stem cells.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.07::631-714 PF02187::GAS2 99.97::727-798 GO:0008017::microtubule binding confident hh_3kbt_A_1::90-113,115-159,204-241,243-266,268-309,311-348,353-364,375-381,407-409,412-496 very confident psy8740 252 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.64::93-224 PF08454::RIH_assoc 99.52::37-84 GO:0005875::microtubule associated complex confident hh_2pmy_A_1::164-192,194-224 confident psy4949 275 Q9Y048::Dystrobrevin-1 ::Plays a role in cholinergic transmission and as a functional partner of dystrophin (dys-1), necessary for muscle maintenance.::Caenorhabditis elegans (taxid: 6239) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.35::23-166 PF09069::EF-hand_3 99.96::94-182 GO:0016010::dystrophin-associated glycoprotein complex confident hh_1eg3_A_1::1-19,22-48,51-166,169-186 very confident psy16202 218 P13217::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Essential component of the phototransduction pathway.::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.74::6-161 PF09279::EF-hand_like 99.72::82-173 GO:0016028::rhabdomere confident rp_3ohm_B_1::12-38,41-218 very confident psy2690 125 Q9H4F8::SPARC-related modular calcium-binding protein 1 ::Plays essential roles in both eye and limb development. Probale regulator of osteoblast differentiation.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.10::44-111 PF10591::SPARC_Ca_bdg 99.95::1-108 GO:0005576::extracellular region confident hh_1sra_A_1::2-76,80-117 very confident psy4163 85 P34714::SPARC ::Has a high affinity for collagen. Affects nematode body morphology and mobility. Essential for C.elegans development and muscle function. The cysteine-rich region could have protease inhibitory activity or may provide the framework for a protein binding module. Probable role in skeletal morphogenesis.::Caenorhabditis elegans (taxid: 6239) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.74::7-66 PF10591::SPARC_Ca_bdg 99.88::5-65 GO:0005604::basement membrane confident hh_1sra_A_1::6-75 very confident psy4132 473 Q63810::Calcineurin subunit B type 1 ::Regulatory subunit of calcineurin, a calcium-dependent, calmodulin stimulated protein phosphatase. Confers calcium sensitivity.::Mus musculus (taxid: 10090) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.75::233-397 PF11605::Vps36_ESCRT-II 99.93::2-87 GO:0030431::sleep very confident hh_3ll8_B_1::236-333,337-339,360-363,365-400 very confident psy6493 1321 P13395::Spectrin alpha chain ::Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. Essential for larval survival and development. Stabilizes cell to cell interactions that are critical for the maintenance of cell shape and subcellular organization within embryonic tissues. Lva and spectrin may form a Golgi-based scaffold that mediates interaction of Golgi bodies with microtubules and facilitates Golgi-derived membrane secretion required for the formation of furrows during cellularization.::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.83::1162-1320 PF12128::DUF3584 99.22::800-1011 GO:0045169::fusome confident hh_1u4q_A_1::513-830 very confident psy6935 1575 P16546::Spectrin alpha chain, non-erythrocytic 1 ::Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.::Mus musculus (taxid: 10090) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.98::1493-1567 PF12128::DUF3584 99.17::1084-1167 GO:0045169::fusome confident hh_1u4q_A_1::796-1114 very confident psy7068 487 P34216::EH domain-containing and endocytosis protein 1 ::Functions at the internalization step of the clathrin-mediated endocytosis (CME) as an early-acting scaffold protein. Requires clathrin adapter proteins, ENT1/2 and YAP1801/2, for normal spatiotemporal dynamics and viability. Binds to biological membranes in a ubiquitin-dependent manner.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.81::275-453 PF12763::EF-hand_4 99.73::275-370 GO:0043231::intracellular membrane-bounded organelle confident rp_2kgr_A_1::270-374 very confident psy11746 172 Q5RBP4::EH domain-containing protein 1 ::Acts in early endocytic membrane fusion and membrane trafficking of recycling endosomes.::Pongo abelii (taxid: 9601) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.43::77-139 PF12763::EF-hand_4 99.96::76-169 GO:0055038::recycling endosome membrane confident hh_2jq6_A_1::29-49,52-167 very confident psy8460 86 Q32L26::EF-hand calcium-binding domain-containing protein 1 ::::Bos taurus (taxid: 9913) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.58::1-61 PF13499::EF-hand_7 98.92::2-56 GO:0005488::binding confident hh_1dgu_A_1::2-69 confident psy922 243 A2VEI2::Calcium uptake protein 1 homolog, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.86::75-212 PF13499::EF-hand_7 99.18::78-141 GO:0005509::calcium ion binding confident hh_2znd_A_2::76-123,127-143,147-176,178-212 confident psy15703 84 P0DH96::Calmodulin-4 ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.::Arabidopsis thaliana (taxid: 3702) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.73::1-84 PF13499::EF-hand_7 99.62::6-67 GO:0005509::calcium ion binding confident hh_3sg6_A_1::2-84 very confident psy15326 78 P36609::Neuronal calcium sensor 2 ::Neuronal calcium sensor, regulator of G protein-coupled receptor phosphorylation in a calcium dependent manner.::Caenorhabditis elegans (taxid: 6239) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.33::1-70 PF13499::EF-hand_7 99.45::2-66 GO:0005509::calcium ion binding confident hh_1bjf_A_1::2-76 very confident psy15327 127 P42325::Neurocalcin homolog ::Inhibits the phosphorylation of rhodopsin in a calcium-dependent manner. Probably binds two or three calcium ions.::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.79::2-114 PF13499::EF-hand_7 99.45::2-62 GO:0005509::calcium ion binding very confident bp_1bjf_A_1::1-126 very confident psy4728 214 P47947::Troponin C, isoform 1 ::::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.91::52-178 PF13499::EF-hand_7 99.28::59-120 GO:0005509::calcium ion binding confident hh_2jnf_A_2::1-49,51-121 very confident psy12124 115 P47948::Troponin C, isoform 2 ::::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.93::1-115 PF13499::EF-hand_7 99.53::58-114 GO:0005509::calcium ion binding confident hh_1avs_A_1::53-114 very confident psy15708 87 P47948::Troponin C, isoform 2 ::::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.34::3-63 PF13499::EF-hand_7 99.40::3-59 GO:0005509::calcium ion binding confident hh_2jnf_A_1::3-55,57-62 very confident psy13766 165 P54357::Myosin-2 essential light chain ::::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.92::28-164 PF13499::EF-hand_7 99.23::46-104 GO:0005509::calcium ion binding confident hh_2mys_C_1::44-161 very confident psy13834 104 P62157::Calmodulin ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Together with CEP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis.::Bos taurus (taxid: 9913) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.60::4-97 PF13499::EF-hand_7 99.39::36-95 GO:0005509::calcium ion binding confident hh_2jnf_A_1::6-39,42-97 very confident psy10242 77 P62203::Calmodulin ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.::Plasmodium falciparum (isolate 3D7) (taxid: 36329) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.62::3-76 PF13499::EF-hand_7 99.69::12-73 GO:0005509::calcium ion binding confident hh_3sg6_A_1::4-75 very confident psy12589 149 Q03509::Calmodulin-6 ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.::Arabidopsis thaliana (taxid: 3702) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.97::2-143 PF13499::EF-hand_7 99.53::80-141 GO:0005509::calcium ion binding very confident hh_3sg6_A_1::3-26,28-143 very confident psy3155 131 Q09665::Troponin C, isoform 2 ::::Caenorhabditis elegans (taxid: 6239) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.97::1-131 PF13499::EF-hand_7 99.49::1-61 GO:0005509::calcium ion binding very confident hh_2jnf_A_1::1-131 very confident psy11508 237 Q54IY3::Centrin-A ::Plays a fundamental role in microtubule-organizing center structure and function.::Dictyostelium discoideum (taxid: 44689) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.75::30-167 PF13499::EF-hand_7 99.16::34-94 GO:0005509::calcium ion binding confident hh_3sg6_A_1::5-18,20-26,28-104,108-117,124-162,164-167,169-173 very confident psy17265 161 Q5ZM44::Calcineurin B homologous protein 1 ::Required for constitutive membrane traffic. Inhibits GTPase-stimulated Na(+)/H(+) exchange. Also inhibits calcineurin phosphatase activity.::Gallus gallus (taxid: 9031) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.68::47-149 PF13499::EF-hand_7 99.53::80-146 GO:0005509::calcium ion binding confident hh_2ct9_A_1::57-157 very confident psy17264 75 Q5ZM44::Calcineurin B homologous protein 1 ::Required for constitutive membrane traffic. Inhibits GTPase-stimulated Na(+)/H(+) exchange. Also inhibits calcineurin phosphatase activity.::Gallus gallus (taxid: 9031) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.39::1-63 PF13499::EF-hand_7 99.55::2-60 GO:0005509::calcium ion binding confident hh_2ct9_A_1::2-74 very confident psy17263 188 Q5ZM44::Calcineurin B homologous protein 1 ::Required for constitutive membrane traffic. Inhibits GTPase-stimulated Na(+)/H(+) exchange. Also inhibits calcineurin phosphatase activity.::Gallus gallus (taxid: 9031) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.96::17-177 PF13499::EF-hand_7 99.57::107-173 GO:0005509::calcium ion binding very confident hh_2ct9_A_1::1-73,75-187 very confident psy3180 346 Q6IQP3::Calumenin-A ::Involved in regulation of vitamin K-dependent carboxylation of multiple N-terminal glutamate residues. Seems to inhibit gamma-carboxylase ggcx. Binds 7 calcium ions with a low affinity.::Danio rerio (taxid: 7955) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.88::179-325 PF13499::EF-hand_7 99.31::12-73 GO:0005509::calcium ion binding confident hh_1jfj_A_1::12-80,95-132,134-134,139-163 very confident psy164 161 Q9CQ46::EF-hand calcium-binding domain-containing protein 2 ::::Mus musculus (taxid: 10090) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 100.00::5-159 PF13499::EF-hand_7 99.54::93-154 GO:0005509::calcium ion binding very confident hh_2obh_A_1::10-83,88-155 very confident psy3148 123 Q9VJ26::EF-hand domain-containing protein CG10641 ::::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.84::2-114 PF13499::EF-hand_7 99.45::7-67 GO:0005509::calcium ion binding confident hh_2jjz_A_1::3-71,79-83,87-100 very confident psy10590 344 Q2UPT7::FK506-binding protein 2 ::PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.80::36-184 PF13499::EF-hand_7 99.08::265-338 GO:0005634::nucleus confident hh_1jfj_A_1::47-79,95-159,164-184 very confident psy5333 417 Q8BP92::Reticulocalbin-2 ::Not known. Binds calcium.::Mus musculus (taxid: 10090) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.87::252-392 PF13499::EF-hand_7 99.15::166-227 GO:0005783::endoplasmic reticulum confident hh_3khe_A_2::162-232,252-283,287-321 very confident psy10339 476 P81117::Nucleobindin-2 ::Calcium-binding protein. May have a role in calcium homeostasis.::Mus musculus (taxid: 10090) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.69::216-409 PF13499::EF-hand_7 99.05::326-406 GO:0005797::Golgi medial cisterna confident hh_1snl_A_1::253-315,349-349,374-411 very confident psy11348 160 Q6AXZ3::Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma ::May regulate MCM3AP phosphorylation through phosphatase recruitment. May play a role in the activation-induced cell death of B-cells.::Rattus norvegicus (taxid: 10116) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.96::10-159 PF13499::EF-hand_7 99.28::91-159 GO:0005813::centrosome confident hh_2ggz_A_1::13-21,25-121,126-159 confident psy11356 70 Q6AXZ3::Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma ::May regulate MCM3AP phosphorylation through phosphatase recruitment. May play a role in the activation-induced cell death of B-cells.::Rattus norvegicus (taxid: 10116) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 98.84::2-66 PF13499::EF-hand_7 98.60::7-66 GO:0005813::centrosome confident hh_3li6_A_1::7-68 confident psy10941 110 P02607::Myosin light polypeptide 6 ::Regulatory light chain of myosin. Does not bind calcium.::Gallus gallus (taxid: 9031) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.93::1-109 PF13499::EF-hand_7 99.51::1-75 GO:0005829::cytosol confident hh_2mys_C_1::1-93,97-109 very confident psy11003 96 P48451::Calcineurin subunit B type 1 ::Calcineurin is a calcium-binding and calmodulin-binding protein found in all cells from yeast to mammals, and a calcium-dependent, calmodulin-stimulated protein phosphatase.::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.36::19-95 PF13499::EF-hand_7 99.35::41-95 GO:0005829::cytosol confident hh_3ll8_B_1::36-95 very confident psy2870 487 Q9NZI2::Kv channel-interacting protein 1 ::Regulatory subunit of Kv4/D (Shal)-type voltage-gated rapidly inactivating A-type potassium channels. Probably modulates channels density, inactivation kinetics and rate of recovery from inactivation in a calcium-dependent and isoform-specific manner. In vitro, modulates KCND1/Kv4.1 and KCND2/Kv4.2 currents. Seems to be involved in KCND2 trafficking to the cell surface.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.79::187-424 PF13499::EF-hand_7 98.89::337-422 GO:0005829::cytosol confident hh_2jul_A_1::177-230,297-388,401-425,432-442 very confident psy6668 306 Q9NZI2::Kv channel-interacting protein 1 ::Regulatory subunit of Kv4/D (Shal)-type voltage-gated rapidly inactivating A-type potassium channels. Probably modulates channels density, inactivation kinetics and rate of recovery from inactivation in a calcium-dependent and isoform-specific manner. In vitro, modulates KCND1/Kv4.1 and KCND2/Kv4.2 currents. Seems to be involved in KCND2 trafficking to the cell surface.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.85::51-197 PF13499::EF-hand_7 99.06::126-197 GO:0005829::cytosol confident hh_2ggz_A_1::55-70,74-161,169-197 very confident psy17054 171 P12815::Programmed cell death protein 6 ::Calcium-binding protein required for T-cell receptor-, Fas-, and glucocorticoid-induced cell death. Calcium-dependent adapter necessary for the association between PDCD6IP and TSG101 (By similarity). May mediate Ca(2+)-regulated signals along the death pathway. Interaction with DAPK1 can accelerate apoptotic cell death by increasing caspase-3 activity.::Mus musculus (taxid: 10090) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.94::2-136 PF13499::EF-hand_7 99.39::73-134 GO:0006919::activation of cysteine-type endopeptidase activity involved in apoptotic process very confident hh_2znd_A_1::2-169 very confident psy1083 173 P12815::Programmed cell death protein 6 ::Calcium-binding protein required for T-cell receptor-, Fas-, and glucocorticoid-induced cell death. Calcium-dependent adapter necessary for the association between PDCD6IP and TSG101 (By similarity). May mediate Ca(2+)-regulated signals along the death pathway. Interaction with DAPK1 can accelerate apoptotic cell death by increasing caspase-3 activity.::Mus musculus (taxid: 10090) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.93::7-138 PF13499::EF-hand_7 99.36::75-136 GO:0006919::activation of cysteine-type endopeptidase activity involved in apoptotic process very confident hh_1y1x_A_1::2-35,37-171 very confident psy1820 149 Q757B7::Calcineurin subunit B ::Regulatory subunit of calcineurin, a calcium-dependent, calmodulin stimulated protein phosphatase. Confers calcium sensitivity.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.90::14-147 PF13499::EF-hand_7 99.59::76-142 GO:0007638::mechanosensory behavior confident hh_2l4h_A_1::15-24,26-30,36-104,106-147 very confident psy12168 150 Q9NZI2::Kv channel-interacting protein 1 ::Regulatory subunit of Kv4/D (Shal)-type voltage-gated rapidly inactivating A-type potassium channels. Probably modulates channels density, inactivation kinetics and rate of recovery from inactivation in a calcium-dependent and isoform-specific manner. In vitro, modulates KCND1/Kv4.1 and KCND2/Kv4.2 currents. Seems to be involved in KCND2 trafficking to the cell surface.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.77::8-129 PF13499::EF-hand_7 99.41::53-125 GO:0008048::calcium sensitive guanylate cyclase activator activity confident hh_2r2i_A_1::15-90,95-129 very confident psy15319 101 P18432::Myosin regulatory light chain 2 ::::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.87::1-99 PF13499::EF-hand_7 99.32::1-57 GO:0030426::growth cone confident hh_3dtp_E_1::1-63,66-94,96-99 very confident psy12851 148 P62147::Calmodulin-1 ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.::Branchiostoma floridae (taxid: 7739) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 100.00::2-147 PF13499::EF-hand_7 99.53::86-146 GO:0030426::growth cone very confident hh_1exr_A_1::2-147 very confident psy10243 201 P62157::Calmodulin ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Together with CEP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis.::Bos taurus (taxid: 9913) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.90::48-200 PF13499::EF-hand_7 99.43::137-198 GO:0030426::growth cone confident hh_2f2o_A_1::49-95,103-119,130-200 very confident psy7436 243 P62157::Calmodulin ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Together with CEP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis.::Bos taurus (taxid: 9913) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.93::84-232 PF13499::EF-hand_7 99.37::170-230 GO:0030426::growth cone very confident hh_2f2o_A_2::2-46,63-139,148-160 very confident psy6108 131 Q03509::Calmodulin-6 ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.::Arabidopsis thaliana (taxid: 3702) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.96::2-130 PF13499::EF-hand_7 99.56::11-72 GO:0030426::growth cone very confident hh_4ds7_A_1::2-112,114-130 very confident psy15709 121 Q09665::Troponin C, isoform 2 ::::Caenorhabditis elegans (taxid: 6239) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.97::1-121 PF13499::EF-hand_7 99.37::31-92 GO:0030426::growth cone confident hh_3sg6_A_1::2-61,63-121 very confident psy11002 195 P48451::Calcineurin subunit B type 1 ::Calcineurin is a calcium-binding and calmodulin-binding protein found in all cells from yeast to mammals, and a calcium-dependent, calmodulin-stimulated protein phosphatase.::Drosophila melanogaster (taxid: 7227) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.90::42-185 PF13499::EF-hand_7 99.49::116-182 GO:0030431::sleep very confident hh_3ll8_B_1::47-91,96-185 very confident psy9152 324 Q03509::Calmodulin-6 ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.::Arabidopsis thaliana (taxid: 3702) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.90::48-205 PF13499::EF-hand_7 99.09::60-123 GO:0031090::organelle membrane confident hh_3sg6_A_1::51-109,112-187,196-204 very confident psy9937 149 Q6FLU4::Calcineurin subunit B ::Regulatory subunit of calcineurin, a calcium-dependent, calmodulin stimulated protein phosphatase. Confers calcium sensitivity.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.87::7-129 PF13499::EF-hand_7 99.43::69-125 GO:0031090::organelle membrane confident hh_2ggz_A_1::7-22,24-129 very confident psy13257 188 Q2TBN3::Centrin-2 ::The XPC complex is proposed to represent the first factor bound at the sites of DNA damage and together with other core recognition factors, XPA, RPA and the TFIIH complex, is part of the pre-incision (or initial recognition) complex. The XPC complex recognizes a wide spectrum of damaged DNA characterized by distortions of the DNA helix such as single-stranded loops, mismatched bubbles or single stranded overhangs. The orientation of XPC complex binding appears to be crucial for inducing a productive NER. XPC complex is proposed to recognize and to interact with unpaired bases on the undamaged DNA strand which is followed by recruitment of the TFIIH complex and subsequent scanning for lesions in the opposite strand in a 5'-to-3' direction by the NER machinery. Cyclobutane pyrimidine dimers (CPDs) which are formed upon UV-induced DNA damage esacpe detection by the XPC complex due to a low degree of structural perurbation. Instead they are detected by the UV-DDB complex which in turn recruits and cooperates with the XPC complex in the respective DNA repair.::Bos taurus (taxid: 9913) very confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.97::35-187 PF13499::EF-hand_7 99.44::121-182 GO:0032795::heterotrimeric G-protein binding very confident hh_2obh_A_1::42-183 very confident psy6877 171 A5PJZ1::Calcium-binding mitochondrial carrier protein SCaMC-1 ::Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. May act as a ATP-Mg/Pi exchanger that mediates the transport of Mg-ATP in exchange for phosphate, catalyzing the net uptake or efflux of adenine nucleotides into or from the mitochondria.::Bos taurus (taxid: 9913) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.97::8-151 PF13499::EF-hand_7 99.44::86-147 GO:0033554::cellular response to stress confident hh_1s6i_A_1::12-115,118-151 very confident psy6934 113 P16546::Spectrin alpha chain, non-erythrocytic 1 ::Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.::Mus musculus (taxid: 10090) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.84::3-112 PF13499::EF-hand_7 99.33::11-72 GO:0043234::protein complex confident hh_1sjj_A_1::4-35,37-56,58-75,79-92,94-112 very confident psy8447 229 Q9HAE3::EF-hand calcium-binding domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.92::72-204 PF13499::EF-hand_7 99.44::129-199 GO:0048699::generation of neurons confident hh_1s1e_A_1::37-213 very confident psy5340 164 Q9NZI2::Kv channel-interacting protein 1 ::Regulatory subunit of Kv4/D (Shal)-type voltage-gated rapidly inactivating A-type potassium channels. Probably modulates channels density, inactivation kinetics and rate of recovery from inactivation in a calcium-dependent and isoform-specific manner. In vitro, modulates KCND1/Kv4.1 and KCND2/Kv4.2 currents. Seems to be involved in KCND2 trafficking to the cell surface.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.71::5-153 PF13499::EF-hand_7 99.32::42-149 GO:0048699::generation of neurons confident hh_1s1e_A_1::3-72,77-77,79-163 very confident psy17871 189 Q17QE5::Calcium and integrin-binding protein 1 ::May convert the inactive conformation of integrin alpha-IIb/beta3 to an active form through binding to the integrin cytoplasmic domain (By similarity). Induces cell migration and spreading mediated through integrin (possibly via focal adhesion complexes) (By similarity). Functions as a negative regulator of stress activated MAP kinase (MAPK) signaling pathways (By similarity). May play a role in regulation of apoptosis (By similarity). Interacts with and up-regulates PTK2/FAK1 activity. Down regulates inositol 1,4,5-trisphosphate receptor-dependent calcium signaling. Participates in endomitotic cell cycle, a form of mitosis in which both karyokinesis and cytokinesis are interrupted and is a hallmark of megakaryocyte differentiation.::Bos taurus (taxid: 9913) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.95::16-174 PF13499::EF-hand_7 99.54::102-169 GO:0070886::positive regulation of calcineurin-NFAT signaling cascade confident hh_2l4h_A_1::1-40,46-133,135-182 very confident psy1461 189 Q06190::Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha ::The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 97.64::1-129 PF13499::EF-hand_7 97.19::1-61 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_3nyv_A_1::1-23,27-71,73-128 confident psy12170 73 Q9NS61::Kv channel-interacting protein 2 ::Regulatory subunit of Kv4/D (Shal)-type voltage-gated rapidly inactivating A-type potassium channels. Probably modulates channels density, inactivation kinetics and rate of recovery from inactivation in a calcium-dependent and isoform-specific manner. In vitro, modulates KCND2/Kv4.2 and KCND3/Kv4.3 currents. Involved in KCND2 and KCND3 trafficking to the cell surface.::Homo sapiens (taxid: 9606) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 97.99::34-70 PF13833::EF-hand_8 94.47::24-70 GO:0016043::cellular component organization confident hh_3dd4_A_1::18-71 very confident psy17548 426 Q0IIH8::Protein FAM188A ::May have pro-apoptotic function.::Bos taurus (taxid: 9913) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.42::283-387 PF13898::DUF4205 100.00::19-284 GO:0031965::nuclear membrane confident hh_2ccm_A_1::285-377 confident psy2947 441 Q03509::Calmodulin-6 ::Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.::Arabidopsis thaliana (taxid: 3702) portable COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.87::257-436 PF14580::LRR_9 99.28::60-164 GO:0005509::calcium ion binding confident hh_3j04_B_1::261-281,283-311,349-436 very confident psy13314 161 P91645::Voltage-dependent calcium channel type A subunit alpha-1 ::Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, neurotransmitter release, gene expression, cell motility, cell division and cell death (By similarity). Probably encodes a dihydropyridine-insensitive current. Vital for survival to adulthood.::Drosophila melanogaster (taxid: 7227) confident COG5126::FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only] 99.06::35-119 PF14658::EF-hand_9 98.67::48-116 GO:0043204::perikaryon confident hh_2kav_A_1::15-80,83-86,90-119,124-136 very confident psy6087 168 Q5RDQ7::V-type proton ATPase subunit C 1 ::Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Pongo abelii (taxid: 9601) confident COG5127::Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion] 100.00::2-130 PF03223::V-ATPase_C 100.00::2-120 GO:0005829::cytosol confident hh_1u7l_A_1::2-7,10-120 very confident psy6086 585 Q5RDQ7::V-type proton ATPase subunit C 1 ::Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.::Pongo abelii (taxid: 9601) confident COG5127::Vacuolar H+-ATPase V1 sector, subunit C [Energy production and conversion] 100.00::2-576 PF03223::V-ATPase_C 100.00::4-571 GO:0045177::apical part of cell confident hh_1u7l_A_1::2-28,31-57,83-116,118-301,476-577 very confident psy4857 327 Q86K94::Trafficking protein particle complex subunit 3 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Dictyostelium discoideum (taxid: 44689) confident COG5128::Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 99.93::11-157 PF04051::TRAPP 100.00::166-316 GO:0005829::cytosol confident hh_1sz7_A_1::158-327 very confident psy11330 526 Q5F359::Trafficking protein particle complex subunit 5 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Gallus gallus (taxid: 9031) confident COG5128::Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 100.00::350-526 PF04051::TRAPP 100.00::371-520 GO:0030008::TRAPP complex confident hh_2j3w_B_1::343-360,362-526 very confident psy8965 193 Q5F359::Trafficking protein particle complex subunit 5 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Gallus gallus (taxid: 9031) very confident COG5128::Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 100.00::18-192 PF04051::TRAPP 100.00::38-187 GO:0030008::TRAPP complex very confident hh_2j3w_B_1::10-27,29-193 very confident psy8972 170 Q5F359::Trafficking protein particle complex subunit 5 ::May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Gallus gallus (taxid: 9031) confident COG5128::Transport protein particle (TRAPP) complex subunit [Intracellular trafficking and secretion] 100.00::1-102 PF04051::TRAPP 100.00::1-94 GO:0030008::TRAPP complex confident hh_2j3w_B_1::1-102 very confident psy6030 118 Q9GS21::60S ribosomal protein L28 ::::Dictyostelium discoideum (taxid: 44689) confident COG5129::MAK16 Nuclear protein with HMG-like acidic region [General function prediction only] 98.61::2-98 PF01778::Ribosomal_L28e 100.00::6-115 GO:0005615::extracellular space confident hh_3iz5_b_1::1-75,79-114 very confident psy6028 141 Q9VZS5::60S ribosomal protein L28 ::::Drosophila melanogaster (taxid: 7227) very confident COG5129::MAK16 Nuclear protein with HMG-like acidic region [General function prediction only] 99.69::2-120 PF01778::Ribosomal_L28e 100.00::6-124 GO:0022625::cytosolic large ribosomal subunit very confident hh_4a18_O_1::2-3,5-22,25-59,61-62,65-103,108-133 very confident psy10732 58 Q148F0::Ubiquitin-related modifier 1 homolog ::Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. May also act as an ubiquitin-like protein that is covalently conjugated to other proteins; the relevance of such function is however unclear in vivo.::Bos taurus (taxid: 9913) confident COG5131::URM1 Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones] 98.96::1-58 PF09138::Urm1 99.92::2-58 GO:0016783::sulfurtransferase activity confident hh_1wgk_A_1::1-57 very confident psy9168 96 Q9D2P4::Ubiquitin-related modifier 1 homolog ::Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. May also act as an ubiquitin-like protein that is covalently conjugated to other proteins; the relevance of such function is however unclear in vivo.::Mus musculus (taxid: 10090) very confident COG5131::URM1 Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones] 99.78::22-96 PF09138::Urm1 99.90::14-96 GO:0016783::sulfurtransferase activity very confident hh_1wgk_A_1::22-96 very confident psy14631 308 Q567Z7::Protein BUD31 homolog ::::Danio rerio (taxid: 7955) confident COG5132::BUD31 Cell cycle control protein, G10 family [Transcription / Cell division and chromosome partitioning] 100.00::1-272 PF01125::G10 100.00::1-270 GO:0071013::catalytic step 2 spliceosome confident no hit no match psy11026 257 Q7K0F0::Coiled-coil domain-containing protein 130 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG5134::Uncharacterized conserved protein [Function unknown] 100.00::7-232 PF04502::DUF572 100.00::1-231 GO:0044732::mitotic spindle pole body confident hh_1zso_A_1::40-64,66-77,79-80,83-113 portable psy10064 257 Q7K0F0::Coiled-coil domain-containing protein 130 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG5134::Uncharacterized conserved protein [Function unknown] 100.00::7-232 PF04502::DUF572 100.00::1-231 GO:0044732::mitotic spindle pole body confident hh_1zso_A_1::40-64,66-77,79-80,83-113 portable psy6569 164 Q9VE17::U1 small nuclear ribonucleoprotein C ::Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates E complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region (By similarity). Regulates alternative splicing of a distinct group of target genes.::Drosophila melanogaster (taxid: 7227) very confident COG5136::U1 snRNP-specific protein C [RNA processing and modification] 99.67::1-49 PF06220::zf-U1 99.81::1-38 GO:0005685::U1 snRNP confident hh_3cw1_L_1::1-69 very confident psy10016 149 Q9V464::Histone chaperone asf1 ::Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly. Cooperates with chromatin assembly factor 1 (CAF-1) to promote replication-dependent chromatin assembly. Plays a role in the formation of silent heterochromatin.::Drosophila melanogaster (taxid: 7227) very confident COG5137::Histone chaperone involved in gene silencing [Transcription / Chromatin structure and dynamics] 100.00::16-148 PF04729::ASF1_hist_chap 100.00::16-149 GO:0035059::RCAF complex very confident hh_2i32_A_1::12-149 very confident psy1423 125 P20232::Transcription elongation factor S-II ::Necessary for efficient RNA polymerase II transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by S-II allows the resumption of elongation from the new 3'-terminus.::Drosophila melanogaster (taxid: 7227) confident COG5139::Uncharacterized conserved protein [Function unknown] 95.31::51-103 PF08711::Med26 99.66::52-104 GO:0005730::nucleolus confident hh_1wjt_A_1::24-109 very confident psy6209 115 P55072::Transitional endoplasmic reticulum ATPase ::Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. Regulates E3 ubiquitin-protein ligase activity of RNF19A (By similarity). Component of the VCP/p97-AMFR/gp78 complex that participates in the final step of the sterol-mediated ubiquitination and endoplasmic reticulum-associated degradation (ERAD) of HMGCR.::Homo sapiens (taxid: 9606) confident COG5140::UFD1 Ubiquitin fusion-degradation protein [Posttranslational modification, protein turnover, chaperones] 96.60::1-102 PF02933::CDC48_2 99.61::39-103 GO:0006200::ATP catabolic process very confident hh_3qwz_A_1::1-114 very confident psy1724 473 Q92890::Ubiquitin fusion degradation protein 1 homolog ::Essential component of the ubiquitin-dependent proteolytic pathway which degrades ubiquitin fusion proteins. The ternary complex containing UFD1L, VCP and NPLOC4 binds ubiquitinated proteins and is necessary for the export of misfolded proteins from the ER to the cytoplasm, where they are degraded by the proteasome. The NPLOC4-UFD1L-VCP complex regulates spindle disassembly at the end of mitosis and is necessary for the formation of a closed nuclear envelope. It may be involved in the development of some ectoderm-derived structures.::Homo sapiens (taxid: 9606) confident COG5140::UFD1 Ubiquitin fusion-degradation protein [Posttranslational modification, protein turnover, chaperones] 100.00::206-472 PF03152::UFD1 100.00::209-384 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2yuj_A_1::198-383 very confident psy3924 131 Q8BRH4::Histone-lysine N-methyltransferase MLL3 ::Histone methyltransferase. Methylates 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. Central component of the MLL2/MLL3 complex, a coactivator complex of nuclear receptors, involved in transcriptional coactivation. MLL3 may be a catalytic subunit of this complex.::Mus musculus (taxid: 10090) confident COG5141::PHD zinc finger-containing protein [General function prediction only] 97.34::36-91 PF00628::PHD 98.98::38-85 GO:0051568::histone H3-K4 methylation confident hh_2ysm_A_1::6-20,27-91 very confident psy11049 237 O54826::Protein AF-10 ::Probably involved in transcriptional regulation. Binds to cruciform DNA.::Mus musculus (taxid: 10090) confident COG5141::PHD zinc finger-containing protein [General function prediction only] 100.00::37-220 PF13832::zf-HC5HC2H_2 99.96::98-216 GO:0005737::cytoplasm confident hh_2ku3_A_1::37-61,64-92 very confident psy2279 830 P55201::Peregrin ::Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity. Positively regulates the transcription of RUNX1 and RUNX2.::Homo sapiens (taxid: 9606) confident COG5141::PHD zinc finger-containing protein [General function prediction only] 100.00::57-539 PF13832::zf-HC5HC2H_2 99.92::190-308 GO:0042393::histone binding confident hh_3pfs_A_1::714-828 very confident psy5645 525 Q29EQ3::PHD finger protein rhinoceros ::May function as a negative regulator of the EGFR/Ras/MAPK signaling pathway during eye development.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident COG5141::PHD zinc finger-containing protein [General function prediction only] 100.00::280-510 PF13832::zf-HC5HC2H_2 99.92::392-506 GO:0043983::histone H4-K12 acetylation confident hh_2l43_A_1::333-388 very confident psy14606 145 O97159::Chromodomain-helicase-DNA-binding protein Mi-2 homolog ::Vital role in development. Protein binds to a portion of Hunchback (HB) protein that is critical for repression of bithorax complex (BXC) genes. May also function in polycomb group (PcG) repression of Hox genes.::Drosophila melanogaster (taxid: 7227) confident COG5141::PHD zinc finger-containing protein [General function prediction only] 98.78::7-107 PF15446::zf-PHD-like 98.97::14-108 GO:0045111::intermediate filament cytoskeleton confident hh_2ysm_A_1::7-57,78-109,111-123 very confident psy4173 61 Q4I8S2::Oxidation resistance protein 1 ::May be involved in protection from oxidative damage.::Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) (taxid: 229533) confident COG5142::OXR1 Oxidation resistance protein [DNA replication, recombination, and repair] 99.83::2-61 PF07534::TLD 99.61::2-60 GO:0005634::nucleus confident hh_4acj_A_1::1-61 very confident psy18090 421 Q5ZJX5::TLD domain-containing protein KIAA1609 homolog ::::Gallus gallus (taxid: 9031) confident COG5142::OXR1 Oxidation resistance protein [DNA replication, recombination, and repair] 99.96::208-375 PF07534::TLD 99.98::232-375 GO:0005886::plasma membrane confident hh_4acj_A_1::207-314,321-346,348-353,355-374 very confident psy1529 175 Q755A3::Oxidation resistance protein 1 ::May be involved in protection from oxidative damage.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident COG5142::OXR1 Oxidation resistance protein [DNA replication, recombination, and repair] 100.00::1-175 PF07534::TLD 100.00::24-175 GO:0043195::terminal bouton confident hh_4acj_A_1::1-70,80-106,116-175 very confident psy5723 162 Q2KJD2::Vesicle-associated membrane protein 3 ::SNARE involved in vesicular transport from the late endosomes to the trans-Golgi network.::Bos taurus (taxid: 9913) confident COG5143::SNC1 Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion] 99.22::31-150 PF00957::Synaptobrevin 99.72::29-108 GO:0070032::synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex confident hh_2kog_A_1::20-72,79-108 very confident psy15388 217 Q7SXP0::Vesicle-trafficking protein SEC22b-B ::SNARE involved in targeting and fusion of ER-derived transport vesicles with the Golgi complex as well as Golgi-derived retrograde transport vesicles with the ER.::Danio rerio (taxid: 7955) confident COG5143::SNC1 Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion] 99.91::5-193 PF13774::Longin 99.78::36-117 GO:0005789::endoplasmic reticulum membrane confident hh_2nut_C_1::1-27,29-194 very confident psy130 199 Q9CQW1::Synaptobrevin homolog YKT6 ::Vesicular soluble NSF attachment protein receptor (v-SNARE) mediating vesicle docking and fusion to a specific acceptor cellular compartment. Functions in endoplasmic reticulum to Golgi transport; as part of a SNARE complex composed of GOSR1, GOSR2 and STX5. Functions in early/recycling endosome to TGN transport; as part of a SNARE complex composed of BET1L, GOSR1 and STX5. Has a S-palmitoyl transferase activity.::Mus musculus (taxid: 10090) very confident COG5143::SNC1 Synaptobrevin/VAMP-like protein [Intracellular trafficking and secretion] 100.00::4-198 PF13774::Longin 99.73::45-124 GO:0019706::protein-cysteine S-palmitoleyltransferase activity very confident hh_3kyq_A_1::1-198 very confident psy13810 386 P60027::General transcription factor IIH subunit 4 ::Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II.::Pan troglodytes (taxid: 9598) very confident COG5144::TFB2 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2 [Transcription / DNA replication, recombination, and repair] 100.00::2-381 PF03849::Tfb2 100.00::1-298 GO:0008353::RNA polymerase II carboxy-terminal domain kinase activity confident hh_3dom_A_1::300-302,304-383 very confident psy11631 219 Q02870::DNA excision repair protein haywire ::Probably an ATP-dependent DNA helicase involved in excision repair of DNA. May have a DNA unwinding function.::Drosophila melanogaster (taxid: 7227) confident COG5144::TFB2 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB2 [Transcription / DNA replication, recombination, and repair] 96.77::66-161 PF13625::Helicase_C_3 100.00::67-197 GO:0008344::adult locomotory behavior confident no hit no match psy1894 228 Q6H628::Monothiol glutaredoxin-S6 ::May only reduce GSH-thiol disulfides, but not protein disulfides.::Oryza sativa subsp. japonica (taxid: 39947) confident COG5145::RAD14 DNA excision repair protein [DNA replication, recombination, and repair] 99.97::94-225 PF05181::XPA_C 99.85::109-155 GO:0005794::Golgi apparatus confident hh_2enk_A_1::102-198 very confident psy5133 313 P28518::DNA repair protein complementing XP-A cells homolog ::Involved in DNA excision repair. Initiates repair by binding to damaged sites with various affinities, depending on the photoproduct and the transcriptional state of the region.::Drosophila melanogaster (taxid: 7227) confident COG5145::RAD14 DNA excision repair protein [DNA replication, recombination, and repair] 100.00::89-306 PF05181::XPA_C 99.92::164-216 GO:0006289::nucleotide-excision repair confident hh_1d4u_A_1::126-130,133-238 very confident psy11663 297 Q81C81::Type II pantothenate kinase ::Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.::Bacillus cereus (strain ATCC 14579 / DSM 31) (taxid: 226900) confident COG5146::PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] 100.00::1-226 PF03630::Fumble 100.00::1-224 GO:0005737::cytoplasm confident hh_2i7n_A_1::1-135,137-224 very confident psy3290 147 Q9BZ23::Pantothenate kinase 2, mitochondrial ::May be the master regulator of the CoA biosynthesis.::Homo sapiens (taxid: 9606) portable COG5146::PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] 99.83::3-146 PF03630::Fumble 100.00::3-146 GO:0005886::plasma membrane confident hh_2i7n_A_1::1-76,78-146 very confident psy6720 182 Q8K4K6::Pantothenate kinase 1 ::Plays a role in the physiological regulation of the intracellular CoA concentration.::Mus musculus (taxid: 10090) confident COG5146::PanK Pantothenate kinase, acetyl-CoA regulated [Coenzyme metabolism] 100.00::5-164 PF03630::Fumble 100.00::5-165 GO:0016310::phosphorylation confident hh_2i7n_A_1::5-155,157-164 very confident psy10643 769 Q6A068::Cell division cycle 5-like protein ::DNA-binding protein involved in cell cycle control. May act as a transcription activator. Also seems to be involved in the second catalytic step of pre-mRNA splicing.::Mus musculus (taxid: 10090) very confident COG5147::REB1 Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning] 99.91::7-386 PF11831::Myb_Cef 100.00::392-647 GO:0003723::RNA binding very confident hh_1gv2_A_1::7-108 very confident psy15548 108 Q6A068::Cell division cycle 5-like protein ::DNA-binding protein involved in cell cycle control. May act as a transcription activator. Also seems to be involved in the second catalytic step of pre-mRNA splicing.::Mus musculus (taxid: 10090) very confident COG5147::REB1 Myb superfamily proteins, including transcription factors and mRNA splicing factors [Transcription / RNA processing and modification / Cell division and chromosome partitioning] 99.72::2-102 PF13921::Myb_DNA-bind_6 99.87::4-64 GO:0005730::nucleolus very confident rp_2din_A_1::48-103 very confident psy14660 375 P55036::26S proteasome non-ATPase regulatory subunit 4 ::Binds and presumably selects ubiquitin-conjugates for destruction. Displays selectivity for longer polyubiquitin chains. Modulates intestinal fluid secretion.::Homo sapiens (taxid: 9606) very confident COG5148::RPN10 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones] 100.00::1-239 PF04056::Ssl1 100.00::9-186 GO:0006521::regulation of cellular amino acid metabolic process confident hh_2x5n_A_1::2-151,153-164,167-191 very confident psy1283 123 P52654::Transcription initiation factor IIA subunit 1 ::TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with TBP mediates transcriptional activity.::Drosophila melanogaster (taxid: 7227) confident COG5149::TOA1 Transcription initiation factor IIA, large chain [Transcription] 99.73::5-63 PF03153::TFIIA 99.87::11-63 GO:0045944::positive regulation of transcription from RNA polymerase II promoter confident hh_1rm1_C_1::5-62 very confident psy11263 80 Q5RCU0::Transcription initiation factor IIA subunit 1 ::TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation. TFIIA in a complex with TBP mediates transcriptional activity.::Pongo abelii (taxid: 9601) confident COG5149::TOA1 Transcription initiation factor IIA, large chain [Transcription] 99.95::14-80 PF03153::TFIIA 100.00::19-80 GO:0046982::protein heterodimerization activity confident hh_1nvp_C_1::11-80 very confident psy13186 170 Q9VJQ5::Protein Dr1 ::Bifunctional basic transcription factor. Activates transcription of DPE (Downstream Promoter Element) containing promoters while repressing transcription of promoters which contain TATA elements.::Drosophila melanogaster (taxid: 7227) very confident COG5150::Class 2 transcription repressor NC2, beta subunit (Dr1) [Transcription] 100.00::11-138 PF00808::CBFD_NFYB_HMF 99.74::17-80 GO:0005671::Ada2/Gcn5/Ada3 transcription activator complex very confident hh_1jfi_B_1::11-155 very confident psy3459 296 O23310::Nuclear transcription factor Y subunit B-3 ::Component of the NF-Y/HAP transcription factor complex. The NF-Y complex stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters.::Arabidopsis thaliana (taxid: 3702) confident COG5150::Class 2 transcription repressor NC2, beta subunit (Dr1) [Transcription] 99.90::4-124 PF00808::CBFD_NFYB_HMF 99.63::9-73 GO:0016602::CCAAT-binding factor complex confident hh_1jfi_B_1::4-24,26-111,113-135 very confident psy13691 103 P36611::Transcriptional activator hap3 ::Belongs to a complex that binds to the sequence CCAAT located upstream of genes involved in mitochondrial electron transport.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5150::Class 2 transcription repressor NC2, beta subunit (Dr1) [Transcription] 99.93::1-102 PF00808::CBFD_NFYB_HMF 99.84::9-77 GO:0070887::cellular response to chemical stimulus confident hh_2byk_B_1::1-26,31-101 very confident psy11901 100 Q792Q4::Cysteine-rich PDZ-binding protein ::Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.::Rattus norvegicus (taxid: 10116) very confident COG5152::Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only] 90.87::35-89 PF10235::Cript 100.00::11-100 GO:0043025::neuronal cell body very confident hh_2ecv_A_1::55-90 portable psy8320 119 no hit no match COG5152::Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only] 91.27::75-108 PF10235::Cript 100.00::30-119 GO:0043025::neuronal cell body very confident no hit no match psy16818 403 O15541::RING finger protein 113A ::::Homo sapiens (taxid: 9606) confident COG5152::Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only] 100.00::153-288 PF15227::zf-C3HC4_4 99.09::230-267 GO:0008270::zinc ion binding confident hh_2csy_A_1::226-287 very confident psy3244 569 Q8TDN6::Ribosome biogenesis protein BRX1 homolog ::Required for biogenesis of the 60S ribosomal subunit.::Homo sapiens (taxid: 9606) confident COG5154::BRX1 RNA-binding protein required for 60S ribosomal subunit biogenesis [Translation, ribosomal structure and biogenesis] 100.00::91-319 PF04427::Brix 99.97::109-267 GO:0005829::cytosol confident hh_2cxh_A_1::102-138,141-212,214-214,216-220,222-253 confident psy14224 150 P25391::Laminin subunit alpha-1 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Homo sapiens (taxid: 9606) portable COG5156::DOC1 Anaphase-promoting complex (APC), subunit 10 [Cell division and chromosome partitioning / Posttranslational modification, protein turnover, chaperones] 90.77::63-107 PF00055::Laminin_N 100.00::10-144 GO:0005605::basal lamina confident hh_2y38_A_1::5-32,34-58,61-75,77-142 very confident psy5867 287 Q8K2H6::Anaphase-promoting complex subunit 10 ::Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.::Mus musculus (taxid: 10090) confident COG5156::DOC1 Anaphase-promoting complex (APC), subunit 10 [Cell division and chromosome partitioning / Posttranslational modification, protein turnover, chaperones] 100.00::18-185 PF03256::APC10 100.00::19-286 GO:0044428::nuclear part confident hh_1jhj_A_1::6-67,91-185 very confident psy11137 831 Q5ZLM0::Parafibromin ::Tumor suppressor probably involved in transcriptional and post-transcriptional control pathways. May be involved in cell cycle progression through the regulation of cyclin D1/PRAD1 expression. Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II. PAF1C associates with RNA polymerase II, is involved in transcriptional elongation and in histone modifications including methylation on histone H3 'Lys-4' (H3K4me3).::Gallus gallus (taxid: 9031) confident COG5157::CDC73 RNA polymerase II assessory factor [Transcription] 99.94::15-169 PF05179::CDC73 100.00::14-171 GO:0016593::Cdc73/Paf1 complex confident hh_3v46_A_1::15-102,104-123,135-151,155-171 very confident psy11096 554 Q09805::Vacuolar protein sorting-associated protein 45 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5158::SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion] 100.00::1-553 PF00995::Sec1 100.00::22-549 GO:0005829::cytosol confident hh_1epu_A_1::1-57,62-268,270-306,314-330,332-395,399-436,439-439,444-525,527-553 very confident psy8893 820 Q9Y1I2::Vacuolar protein sorting-associated protein 33A ::Required for the biogenesis of eye pigment granules. Plays a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes.::Drosophila melanogaster (taxid: 7227) confident COG5158::SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion] 100.00::13-582 PF00995::Sec1 100.00::33-582 GO:0005829::cytosol confident hh_3tjz_C_1::557-585,587-703 very confident psy8393 98 Q24179::Protein sly1 homolog ::Non-vital for development.::Drosophila melanogaster (taxid: 7227) confident COG5158::SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion] 99.36::14-86 PF00995::Sec1 98.96::44-91 GO:0006892::post-Golgi vesicle-mediated transport confident hh_1y9j_A_1::13-86 very confident psy8630 390 Q6R748::Syntaxin-binding protein 1 ::May participate in the regulation of synaptic vesicle docking and fusion, possibly through interaction with GTP-binding proteins. Essential for neurotransmission and binds syntaxins, components of the synaptic vesicle fusion machinery. May play a role in determining the specificity of intracellular fusion reactions.::Gallus gallus (taxid: 9031) confident COG5158::SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion] 100.00::1-377 PF00995::Sec1 100.00::1-380 GO:0032229::negative regulation of synaptic transmission, GABAergic confident hh_1epu_A_1::1-381 very confident psy8628 75 Q07327::Protein ROP ::May be a component of one of the vesicle trafficking pathways. May interact functionally with Ras2 protein.::Drosophila melanogaster (taxid: 7227) confident COG5158::SEC1 Proteins involved in synaptic transmission and general secretion, Sec1 family [Intracellular trafficking and secretion] 99.52::9-73 PF00995::Sec1 99.66::19-70 GO:0043195::terminal bouton confident hh_1epu_A_1::4-75 very confident psy3486 222 P61203::COP9 signalosome complex subunit 2 ::Essential component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1 and IRF8/ICSBP, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively. Involved in early stage of neuronal differentiation via its interaction with NIF3L1.::Rattus norvegicus (taxid: 10116) confident COG5159::RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 99.75::19-138 PF01399::PCI 98.65::2-68 GO:0003714::transcription corepressor activity confident hh_3txn_A_2::1-72 confident psy4083 374 Q8BG32::26S proteasome non-ATPase regulatory subunit 11 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Mus musculus (taxid: 10090) very confident COG5159::RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 100.00::1-373 PF10602::RPN7 99.72::95-257 GO:0022624::proteasome accessory complex confident hh_3txn_A_1::26-374 very confident psy3481 340 P61203::COP9 signalosome complex subunit 2 ::Essential component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1 and IRF8/ICSBP, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively. Involved in early stage of neuronal differentiation via its interaction with NIF3L1.::Rattus norvegicus (taxid: 10116) very confident COG5159::RPN6 26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones] 99.94::41-340 PF13906::AA_permease_C 99.59::256-301 GO:0003714::transcription corepressor activity confident hh_3txn_A_1::63-100,102-127,130-184,188-188,192-239,294-340 very confident psy14159 264 Q0WKV8::Probable ubiquitin-like-specific protease 2A ::Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins.::Arabidopsis thaliana (taxid: 3702) portable COG5160::ULP1 Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] 99.98::97-253 PF02902::Peptidase_C48 99.83::120-262 GO:0005634::nucleus confident hh_3eay_A_1::91-164,169-260 very confident psy12909 63 Q9P0U3::Sentrin-specific protease 1 ::Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMO1, SUMO2 and SUMO3 to their mature forms and deconjugation of SUMO1, SUMO2 and SUMO3 from targeted proteins. Deconjugates SUMO1 from HIPK2. Deconjugates SUMO1 from HDAC1, which decreases its transcriptional repression activity.::Homo sapiens (taxid: 9606) confident COG5160::ULP1 Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] 99.84::1-60 PF02902::Peptidase_C48 99.09::2-60 GO:0031323::regulation of cellular metabolic process confident hh_2xph_A_1::1-11,13-60 very confident psy12908 148 Q94F30::Ubiquitin-like-specific protease ESD4 ::Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMOs to their mature forms and deconjugation of SUMO from targeted proteins. Cleaves precursors of SUM1 and SUM2, but not of SUM3 or SUM5. Able to release SUM1 and SUM2 from conjugates, but unable to cleave SUM3. Acts predominantly as an isopeptidase, cleaving SUMO-conjugated proteins better than SUMO peptides. Plays an important role in the control of flowering time.::Arabidopsis thaliana (taxid: 3702) portable COG5160::ULP1 Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones] 100.00::20-146 PF02902::Peptidase_C48 99.94::12-141 GO:0031981::nuclear lumen confident hh_2xph_A_1::19-32,36-62,64-122,124-147 very confident psy92 638 Q9V726::Cleavage and polyadenylation specificity factor subunit 1 ::CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction.::Drosophila melanogaster (taxid: 7227) portable COG5161::SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification] 100.00::14-632 PF03178::CPSF_A 100.00::231-604 GO:0003730::mRNA 3'-UTR binding confident hh_3ei3_A_1::12-26,30-58,60-63,82-95,97-114,116-126,128-148,150-163,168-225,227-246,249-269,275-303,315-360,364-419,429-429,461-462,466-522,524-584,587-634 very confident psy7983 184 Q805F9::DNA damage-binding protein 1 ::Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair. Also appears to function as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the DCX E3 ubiquitin-protein ligase complex is determined by the variable substrate recognition component recruited by DDB1.::Gallus gallus (taxid: 9031) confident COG5161::SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification] 98.85::18-183 PF03178::CPSF_A 99.61::73-142 GO:0005634::nucleus confident hh_3ei3_A_1::76-157,159-184 very confident psy17021 199 Q15393::Splicing factor 3B subunit 3 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Homo sapiens (taxid: 9606) confident COG5161::SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification] 99.57::72-199 PF03178::CPSF_A 99.96::73-199 GO:0043933::macromolecular complex subunit organization confident hh_3ei3_A_1::72-117,119-199 very confident psy13880 256 Q9V726::Cleavage and polyadenylation specificity factor subunit 1 ::CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction.::Drosophila melanogaster (taxid: 7227) portable COG5161::SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification] 99.95::15-253 PF03178::CPSF_A 100.00::62-222 GO:0044424::intracellular part confident hh_3ei3_A_1::63-80,84-139,141-203,206-251 very confident psy7977 1225 Q805F9::DNA damage-binding protein 1 ::Required for DNA repair. Binds to DDB2 to form the UV-damaged DNA-binding protein complex (the UV-DDB complex). The UV-DDB complex may recognize UV-induced DNA damage and recruit proteins of the nucleotide excision repair pathway (the NER pathway) to initiate DNA repair. Also appears to function as a component of numerous distinct DCX (DDB1-CUL4-X-box) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. The functional specificity of the DCX E3 ubiquitin-protein ligase complex is determined by the variable substrate recognition component recruited by DDB1.::Gallus gallus (taxid: 9031) confident COG5161::SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification] 100.00::28-1221 PF10433::MMS1_N 100.00::31-356 GO:0005829::cytosol confident hh_3ei3_A_1::32-43,47-63,65-70,72-361,367-577,754-756,766-766,777-777,836-836,878-880,883-883,919-924,995-1216,1218-1223 very confident psy14552 290 Q15393::Splicing factor 3B subunit 3 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Homo sapiens (taxid: 9606) confident COG5161::SFT1 Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification] 98.21::4-106 PF10433::MMS1_N 99.65::3-104 GO:0071013::catalytic step 2 spliceosome confident hh_3ei3_A_1::1-65,67-92,94-101,140-143,146-151,153-194,198-219,236-289 very confident psy14410 325 Q4WP65::Pescadillo homolog ::Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable COG5163::NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] 100.00::48-238 PF00533::BRCT 98.76::52-109 GO:0042273::ribosomal large subunit biogenesis confident hh_2ep8_A_1::49-115,144-170 very confident psy11416 171 Q6DEV3::Pescadillo homolog ::Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.::Xenopus tropicalis (taxid: 8364) portable COG5163::NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] 100.00::8-160 PF06732::Pescadillo_N 100.00::8-166 GO:0042273::ribosomal large subunit biogenesis confident no hit no match psy14411 85 Q6DEV3::Pescadillo homolog ::Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.::Xenopus tropicalis (taxid: 8364) confident COG5163::NOP7 Protein required for biogenesis of the 60S ribosomal subunit [Translation, ribosomal structure and biogenesis] 100.00::3-85 PF06732::Pescadillo_N 100.00::5-85 GO:0042273::ribosomal large subunit biogenesis confident no hit no match psy2633 764 Q293F6::FACT complex subunit Ssrp1 ::Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II. Binds specifically to single-stranded DNA and RNA with highest affinity for nucleotides G and U. The FACT complex is required for expression of Hox genes.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG5165::POB3 Nucleosome-binding factor SPN, POB3 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] 100.00::5-498 PF03531::SSrecog 100.00::74-286 GO:0031492::nucleosomal DNA binding very confident hh_2gcl_A_1::177-431 very confident psy15186 151 P29774::DNA-binding protein D-ETS-3 ::::Drosophila melanogaster (taxid: 7227) very confident COG5169::HSF1 Heat shock transcription factor [Transcription] 93.32::72-128 PF00178::Ets 100.00::65-151 GO:0000980::RNA polymerase II distal enhancer sequence-specific DNA binding very confident hh_1fli_A_1::61-137,140-140,144-151 very confident psy18222 130 P29776::DNA-binding protein D-ETS-6 ::::Drosophila melanogaster (taxid: 7227) confident COG5169::HSF1 Heat shock transcription factor [Transcription] 94.66::25-80 PF00178::Ets 100.00::18-100 GO:0003714::transcription corepressor activity confident hh_2nny_A_1::15-105 very confident psy8488 150 P41156::Protein C-ets-1 ::Transcription factor.::Rattus norvegicus (taxid: 10116) confident COG5169::HSF1 Heat shock transcription factor [Transcription] 94.67::48-104 PF00178::Ets 100.00::42-125 GO:0008284::positive regulation of cell proliferation confident hh_2nny_A_1::17-30,38-149 very confident psy13885 246 Q9PUQ1::ETS translocation variant 4 ::Transcriptional activator that binds to the (5'-CCGGA[AT]-3') motif. May control the acquisition of specific cell fates at an early stage during development of the somites and nervous system. May mediate the cellular effects of the fibroblast growth factors on embryogenesis.::Danio rerio (taxid: 7955) portable COG5169::HSF1 Heat shock transcription factor [Transcription] 93.28::180-236 PF00178::Ets 100.00::174-246 GO:0060762::regulation of branching involved in mammary gland duct morphogenesis confident no hit no match psy3995 67 P38533::Heat shock factor protein 2 ::DNA-binding protein that specifically binds heat shock promoter elements (HSE) and activates transcription. In higher eukaryotes, HSF is unable to bind to the HSE unless the cells are heat shocked. HSF2 is expressed in a form that binds DNA constitutively but loses DNA binding by incubation at greater than 41 degrees C.::Mus musculus (taxid: 10090) confident COG5169::HSF1 Heat shock transcription factor [Transcription] 99.94::1-67 PF00447::HSF_DNA-bind 99.95::10-67 GO:0045944::positive regulation of transcription from RNA polymerase II promoter confident hh_1hks_A_1::5-67 very confident psy13887 107 Q66LE6::Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform ::B regulatory subunit of protein phosphatase 2A (PP2A) that plays a key role in cell cycle by controlling mitosis entry and exit. The activity of PP2A complexes containing PPP2R2D (PR55-delta) fluctuate during the cell cycle: the activity is high in interphase and low in mitosis. During mitosis, activity of PP2A is inhibited via interaction with phosphorylated ENSA and ARPP19 inhibitors. Within the PP2A complexes, the B regulatory subunits modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment.::Homo sapiens (taxid: 9606) confident COG5170::CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] 99.94::2-106 PF00400::WD40 97.55::28-52 GO:0005829::cytosol confident rp_3dw8_B_1::6-106 very confident psy13888 70 Q6DIY3::Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform ::B regulatory subunit of protein phosphatase 2A (PP2A) that plays a key role in cell cycle by controlling mitosis entry and exit. The activity of PP2A complexes containing ppp2r2d (PR55-delta) fluctuate during the cell cycle: the activity is high in interphase and low in mitosis. During mitosis, activity of PP2A is inhibited via interaction with phosphorylated ensa and arpp19 inhibitors. PP2A complexes containing ppp2r2d (PR55-delta) also regulate the activity of TGF-beta/Activin/Nodal signaling by restricting receptor activity. Within the PP2A complexes, the B regulatory subunits modulate substrate selectivity and catalytic activity, and also may direct the localization of the catalytic enzyme to a particular subcellular compartment.::Xenopus tropicalis (taxid: 8364) very confident COG5170::CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] 99.97::6-67 PF00400::WD40 96.51::34-63 GO:0005829::cytosol very confident bp_3dw8_B_1::8-56 very confident psy12356 400 Q8BG02::Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform ::The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.::Mus musculus (taxid: 10090) portable COG5170::CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] 99.89::5-266 PF08662::eIF2A 99.34::70-141 GO:0007165::signal transduction confident hh_3dw8_B_1::4-120,122-127,129-162,173-295,304-364 very confident psy8312 145 no hit no match COG5171::YRB1 Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion] 99.96::42-145 PF00638::Ran_BP1 100.00::51-145 GO:0005730::nucleolus confident no hit no match psy11674 161 P49792::E3 SUMO-protein ligase RanBP2 ::E3 SUMO-protein ligase which facilitates SUMO1 and SUMO2 conjugation by UBE2I. Involved in transport factor (Ran-GTP, karyopherin)-mediated protein import via the F-G repeat-containing domain which acts as a docking site for substrates. Could also have isomerase or chaperone activity and may bind RNA or DNA. Component of the nuclear export pathway. Specific docking site for the nuclear export factor exportin-1.::Homo sapiens (taxid: 9606) confident COG5171::YRB1 Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion] 100.00::5-161 PF00638::Ran_BP1 99.97::70-160 GO:0005829::cytosol confident hh_1rrp_B_1::13-49,92-160 very confident psy15646 388 Q54KD9::Ran-specific GTPase-activating protein homolog ::::Dictyostelium discoideum (taxid: 44689) portable COG5171::YRB1 Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion] 100.00::156-286 PF00638::Ran_BP1 100.00::175-286 GO:0043234::protein complex confident hh_1rrp_B_1::163-286 very confident psy1735 335 Q9VFS5::Serine/threonine-protein phosphatase 4 regulatory subunit 3 ::Regulatory subunit of serine/threonine-protein phosphatase 4. The probable PP4 complex Pp4-19C-PPP4R2r-flfl (PPP4C-PPP4R2-PPP4R3) is required to prevent caspase induced cell death (in vitro). May be involved in DNA damage repair. Key mediator specific for the localization of mira and associated cell fate determinants during both interphase and mitosis. Nuclear Flfl is required to exclude mira/pros from the nucleus when inefficiently bound to the cytoskeleton/cortex, whereas cytosolic or membrane-associated flfl is required for the cortical association and asymmetric localization of mira/pros/brat/stau at metaphase and anaphase.::Drosophila melanogaster (taxid: 7227) confident COG5171::YRB1 Ran GTPase-activating protein (Ran-binding protein) [Intracellular trafficking and secretion] 90.63::13-110 PF04802::SMK-1 100.00::174-332 GO:0005737::cytoplasm confident hh_1rrp_B_1::13-110 confident psy17363 790 Q5ZLD7::Vacuolar protein sorting-associated protein 53 homolog ::May be involved in retrograde transport of early and late endosomes to the late Golgi.::Gallus gallus (taxid: 9031) very confident COG5173::SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion] 99.95::38-747 PF04100::Vps53_N 100.00::35-405 GO:0000938::GARP complex confident hh_3fhn_A_1::51-87,89-96,104-122,124-272,276-328,333-360,370-402,411-412,420-445,448-448,451-468,472-473,485-490,496-540,543-616,619-667,669-671,683-684,688-715,718-744 confident psy12595 733 Q6KAR6::Exocyst complex component 3 ::Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.::Mus musculus (taxid: 10090) confident COG5173::SEC6 Exocyst complex subunit SEC6 [Intracellular trafficking and secretion] 100.00::14-732 PF06046::Sec6 100.00::180-732 GO:0016028::rhabdomere confident hh_2fji_1_1::368-513,515-568,570-614,616-622,625-662,664-665,667-732 very confident psy14241 136 P29084::Transcription initiation factor IIE subunit beta ::Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.::Homo sapiens (taxid: 9606) confident COG5174::TFA2 Transcription initiation factor IIE, beta subunit [Transcription] 100.00::6-134 PF02186::TFIIE_beta 98.61::7-31 GO:0005634::nucleus confident hh_1d8j_A_1::2-18,20-32 confident psy14236 290 P29084::Transcription initiation factor IIE subunit beta ::Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.::Homo sapiens (taxid: 9606) very confident COG5174::TFA2 Transcription initiation factor IIE, beta subunit [Transcription] 100.00::7-290 PF02186::TFIIE_beta 99.80::70-144 GO:0005737::cytoplasm very confident hh_1d8j_A_1::64-131,133-145 very confident psy17806 130 Q94535::Splicing factor U2af 38 kDa subunit ::Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly.::Drosophila melanogaster (taxid: 7227) very confident COG5175::MOT2 Transcriptional repressor [Transcription] 98.93::15-120 PF13893::RRM_5 99.57::12-72 GO:0071011::precatalytic spliceosome very confident hh_1jmt_A_1::1-17,19-73 very confident psy14719 160 Q9YH18::Protein quaking ::RNA-binding protein that plays a central role in myelinization. Binds to the 5'-NACUAAY-N(1,20)-UAAY-3' RNA core sequence. Acts by regulating pre-mRNA splicing, mRNA export, mRNA stability and protein translation. Required to protect and promote stability of mRNAs which promotes oligodendrocyte differentiation. Participates in mRNA transport by regulating the nuclear export of MBP mRNA. Also involved in regulation of mRNA splicing of some pre-mRNA. Acts as a translational repressor.::Gallus gallus (taxid: 9031) confident COG5176::MSL5 Splicing factor (branch point binding protein) [RNA processing and modification] 99.72::1-100 PF00013::KH_1 93.04::2-68 GO:0001570::vasculogenesis confident hh_2bl5_A_1::1-107 very confident psy17590 98 Q4TVV3::Probable ATP-dependent RNA helicase DDX46 ::Plays an essential role in splicing, either prior to, or during A complex formation.::Danio rerio (taxid: 7955) confident COG5176::MSL5 Splicing factor (branch point binding protein) [RNA processing and modification] 94.69::12-74 PF00013::KH_1 96.87::11-66 GO:0005730::nucleolus confident hh_1k1g_A_1::9-73 confident psy1580 267 Q08BJ2::KH domain-containing, RNA-binding, signal transduction-associated protein 2 ::RNA-binding protein that plays a role in the regulation of alternative splicing.::Danio rerio (taxid: 7955) confident COG5176::MSL5 Splicing factor (branch point binding protein) [RNA processing and modification] 99.96::10-154 PF00013::KH_1 98.19::23-117 GO:0016607::nuclear speck confident hh_1k1g_A_1::19-75,79-84,86-102,108-125,128-154 very confident psy1775 304 Q15637::Splicing factor 1 ::Necessary for the ATP-dependent first step of spliceosome assembly. Binds to the intron branch point sequence (BPS) 5'-UACUAAC-3' of the pre-mRNA. May act as transcription repressor.::Homo sapiens (taxid: 9606) confident COG5176::MSL5 Splicing factor (branch point binding protein) [RNA processing and modification] 100.00::117-299 PF00013::KH_1 98.88::197-282 GO:0071011::precatalytic spliceosome confident hh_1k1g_A_1::193-290,293-301 very confident psy14680 78 Q9JKN6::RNA-binding protein Nova-1 ::Functions to regulate alternative splicing in neurons by binding pre-mRNA in a sequence-specific manner to activate exon inclusion. It binds specifically to the sequence UCAUY. Most likely acts to activate the inclusion of exon E3A in the glycine receptor alpha-2 chain and of exon E9 in gamma-aminobutyric-acid receptor gamma-2 subunit via a distal downstream UCAU-rich intronic splicing enhancer.::Mus musculus (taxid: 10090) confident COG5176::MSL5 Splicing factor (branch point binding protein) [RNA processing and modification] 97.95::11-53 PF13014::KH_3 99.53::24-68 GO:0005634::nucleus confident hh_2anr_A_1::11-71 very confident psy12968 402 Q9JLP1::KH domain-containing, RNA-binding, signal transduction-associated protein 3 ::RNA-binding protein that plays a role in the regulation of alternative splicing and influences mRNA splice site selection and exon inclusion. May play a role as a negative regulator of cell growth. Inhibits cell proliferation. Involved in splice site selection of vascular endothelial growth factor. Induces an increased concentration-dependent incorporation of exon in CD44 pre-mRNA by direct binding to purine-rich exonic enhancer. RNA-binding abilities are down-regulated by tyrosine kinase PTK6. Binds preferentially to the 5'-[AU]UAAA-3' motif in vitro.::Rattus norvegicus (taxid: 10116) confident COG5176::MSL5 Splicing factor (branch point binding protein) [RNA processing and modification] 99.94::67-194 PF13014::KH_3 98.05::87-114 GO:0005730::nucleolus confident hh_1k1g_A_1::69-124,128-132,134-150,156-196 very confident psy12978 210 O01367::Protein held out wings ::Required for integrin-mediated cell-adhesion in wing blade. Vital role in steroid regulation of muscle development and to control heart rate. Required during embryogenesis, in late stages of somatic muscle development, for myotube migration and during metamorphosis for muscle reorganization.::Drosophila melanogaster (taxid: 7227) confident COG5176::MSL5 Splicing factor (branch point binding protein) [RNA processing and modification] 98.04::23-74 no hit no match GO:0003730::mRNA 3'-UTR binding confident hh_2bl5_A_1::26-80 very confident psy8075 1074 Q80U19::Disheveled-associated activator of morphogenesis 2 ::::Mus musculus (taxid: 10090) confident COG5178::PRP8 U5 snRNP spliceosome subunit [RNA processing and modification] 94.57::944-952 PF02181::FH2 100.00::613-974 GO:0051489::regulation of filopodium assembly confident hh_2j1d_G_1::613-668,671-1014,1019-1043,1045-1055,1058-1073 very confident psy9260 217 P34369::Pre-mRNA-splicing factor 8 homolog ::Central component of the spliceosome, which may play a role in aligning the pre-mRNA 5'- and 3'-exons for ligation. Interacts with U5 snRNA, and with pre-mRNA 5'-splice sites in B spliceosomes and 3'-splice sites in C spliceosomes.::Caenorhabditis elegans (taxid: 6239) confident COG5178::PRP8 U5 snRNP spliceosome subunit [RNA processing and modification] 100.00::19-210 PF10596::U6-snRNA_bdg 100.00::19-123 GO:0005682::U5 snRNP very confident bp_3zef_B_1::29-196 very confident psy10178 655 Q8IN94::Trithorax group protein osa ::Trithorax group (trxG) protein required for embryonic segmentation, development of the notum and wing margin, and photoreceptor differentiation. Required for the activation of genes such as Antp, Ubx and Eve. Binds to DNA without specific affinity, suggesting that it is recruited to promoters by promoter-specific proteins. Essential component of the Brahma complex, a multiprotein complex which is the equivalent of the yeast SWI/SNF complex and acts by remodeling the chromatin by catalyzing an ATP-dependent alteration in the structure of nucleosomal DNA. This complex can both serve as a transcriptional coactivator or corepressor, depending on the context. Acts as an essential coactivator for Zeste, which recruits the whole complex to specific genes. In contrast, it acts as a corepressor for Wg target genes, possibly via an interaction with Pan and Gro. It also acts as a negative regulator for proneural achaete-scute, when it is directly recruited by Pan and Chi. Also represses E2f activation.::Drosophila melanogaster (taxid: 7227) confident COG5178::PRP8 U5 snRNP spliceosome subunit [RNA processing and modification] 93.60::465-483 PF12031::DUF3518 100.00::212-472 GO:0090544::BAF-type complex confident hh_2z6h_A_1::224-255,271-272,296-321,323-333,342-344,353-376,383-398,400-426,428-459,462-505,508-530,538-548,551-587,589-617 confident psy3344 1282 P34369::Pre-mRNA-splicing factor 8 homolog ::Central component of the spliceosome, which may play a role in aligning the pre-mRNA 5'- and 3'-exons for ligation. Interacts with U5 snRNA, and with pre-mRNA 5'-splice sites in B spliceosomes and 3'-splice sites in C spliceosomes.::Caenorhabditis elegans (taxid: 6239) portable COG5178::PRP8 U5 snRNP spliceosome subunit [RNA processing and modification] 100.00::27-690 PF12134::PRP8_domainIV 100.00::343-478 GO:0071013::catalytic step 2 spliceosome confident hh_3enb_A_1::352-478 very confident psy10447 166 Q99NB9::Splicing factor 3B subunit 1 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Mus musculus (taxid: 10090) very confident COG5181::HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] 100.00::5-165 PF01602::Adaptin_N 96.22::15-165 GO:0003682::chromatin binding very confident hh_1b3u_A_1::31-51,55-92,95-108,115-164 confident psy14014 615 P36179::Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit ::The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of the catalytic subunit and a variable regulatory B subunit.::Drosophila melanogaster (taxid: 7227) very confident COG5181::HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] 99.94::17-613 PF01602::Adaptin_N 99.88::15-614 GO:0005829::cytosol very confident hh_1b3u_A_1::7-406,412-412,431-613 very confident psy10461 1359 P49955::U2 snRNP component HSH155 ::Contacts pre-mRNA on both sides of the branch site early in spliceosome assembly.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5181::HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] 100.00::221-1359 PF08920::SF3b1 99.93::289-406 GO:0071004::U2-type prespliceosome confident hh_3lqv_P_1::330-368 very confident psy10471 318 Q99NB9::Splicing factor 3B subunit 1 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Mus musculus (taxid: 10090) confident COG5181::HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] 100.00::7-318 PF11865::DUF3385 99.58::66-213 GO:0003682::chromatin binding confident hh_4fdd_A_1::3-158,160-214,216-286,288-301 confident psy10449 114 Q99NB9::Splicing factor 3B subunit 1 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Mus musculus (taxid: 10090) confident COG5181::HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] 100.00::3-114 no hit no match GO:0003682::chromatin binding confident hh_2qk2_A_1::16-96 portable psy12225 396 Q13435::Splicing factor 3B subunit 2 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Homo sapiens (taxid: 9606) confident COG5182::CUS1 Splicing factor 3b, subunit 2 [RNA processing and modification] 100.00::2-216 PF04037::DUF382 99.95::1-64 GO:0071013::catalytic step 2 spliceosome confident rp_1vt4_I_1::1-16,22-30,32-41,47-52,61-84,86-97,99-107,110-133,139-141,144-202,204-243,245-291,293-325,327-351,359-395 portable psy16527 562 Q28IK8::E3 ubiquitin-protein ligase MARCH8 ::E3 ubiquitin-protein ligase that mediates ubiquitination of cd86 and MHC class II proteins, such as hla-dr alpha and beta, and promotes their subsequent endocytosis and sorting to lysosomes via multivesicular bodies.::Xenopus tropicalis (taxid: 8364) portable COG5183::SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification] 99.28::31-84 PF12906::RINGv 99.31::36-84 GO:0005764::lysosome confident hh_1vyx_A_1::31-43,47-57,60-73,75-88 confident psy16185 263 Q5ZJ41::E3 ubiquitin-protein ligase MARCH5 ::Mitochondrial E3 ubiquitin-protein ligase that plays a crucial role in the control of mitochondrial morphology by acting as a positive regulator of mitochondrial fission. May play a role in the prevention of cell senescence acting as a regulator of mitochondrial quality control.::Gallus gallus (taxid: 9031) portable COG5183::SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification] 99.69::6-75 PF12906::RINGv 99.64::14-68 GO:0005789::endoplasmic reticulum membrane confident hh_1vyx_A_1::7-22,27-55,62-74 confident psy3895 185 Q5ZJ41::E3 ubiquitin-protein ligase MARCH5 ::Mitochondrial E3 ubiquitin-protein ligase that plays a crucial role in the control of mitochondrial morphology by acting as a positive regulator of mitochondrial fission. May play a role in the prevention of cell senescence acting as a regulator of mitochondrial quality control.::Gallus gallus (taxid: 9031) confident COG5183::SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification] 99.66::65-152 PF12906::RINGv 99.69::71-125 GO:0005789::endoplasmic reticulum membrane confident hh_1vyx_A_1::65-78,83-111,118-131 confident psy3674 306 Q5XIE5::E3 ubiquitin-protein ligase MARCH3 ::E3 ubiquitin-protein ligase which may be involved in endosomal trafficking. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates.::Rattus norvegicus (taxid: 10116) portable COG5183::SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification] 99.57::87-198 PF12906::RINGv 99.59::91-134 GO:0043231::intracellular membrane-bounded organelle confident hh_1vyx_A_1::85-141 very confident psy3116 177 Q5XIE5::E3 ubiquitin-protein ligase MARCH3 ::E3 ubiquitin-protein ligase which may be involved in endosomal trafficking. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates.::Rattus norvegicus (taxid: 10116) portable COG5183::SSM4 Protein involved in mRNA turnover and stability [RNA processing and modification] 99.62::35-94 PF12906::RINGv 99.73::41-85 GO:0043231::intracellular membrane-bounded organelle confident hh_2d8s_A_1::30-96 very confident psy1607 241 Q9FN03::Ultraviolet-B receptor UVR8 ::UV-B specific signaling component that acts as UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Upon UV-B irradiation, UVR8 undergoes an immediate switch from homodimer to monomer, accumulates in the nucleus, interacts with the photomorphogenic repressor COP1 and regulates the expression of the transcription factor HY5 by associating with chromatin (through histone H2B binding) in the HY5 promoter region. UVR8 is involved in controlling aspects of leaf growth and morphogenesis in response to UV-B, is required for normal progression of endocycle and has a regulatory role in stomatal differentiation. Is required for plant circadian clock response to photomorphogenic UV-B light, partly through the transcriptional activation of responsive clock genes. Promotes photosynthetic efficiency at elevated levels of UV-B. Plays a role in mediating the effects of UV-B radiation on pathogen resistance by controlling the expression of the sinapate biosynthetic pathway. The two tryptophans, Trp-285 and Trp-233, serve collectively as the UV-B chromophore.::Arabidopsis thaliana (taxid: 3702) portable COG5184::ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] 99.97::15-217 PF00415::RCC1 99.39::160-213 GO:0000790::nuclear chromatin confident hh_3of7_A_2::18-133,142-192,196-239 very confident psy5940 278 Q6ZPR6::Inhibitor of Bruton tyrosine kinase ::Acts as an inhibitor of BTK tyrosine kinase activity, thereby playing a role in B-cell development. Down-regulates BTK kinase activity, leading to interference with BTK-mediated calcium mobilization and NF-kappa-B-driven transcription.::Mus musculus (taxid: 10090) portable COG5184::ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] 100.00::6-266 PF00415::RCC1 99.36::28-77 GO:0005730::nucleolus confident hh_4d9s_A_1::4-21,23-121,125-154,156-166,169-173,175-207,212-228,233-244,246-275 very confident psy1173 498 P25171::Regulator of chromosome condensation ::Promotes the exchange of Ran-bound GDP by GTP. Involved in the regulation of onset of chromosome condensation in the S phase. Binds to the chromatin.::Drosophila melanogaster (taxid: 7227) confident COG5184::ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] 100.00::24-494 PF00415::RCC1 99.40::441-492 GO:0031965::nuclear membrane confident hh_1a12_A_1::22-219,276-331,333-382,409-421,424-497 very confident psy15270 506 Q15751::Probable E3 ubiquitin-protein ligase HERC1 ::Involved in membrane trafficking via some guanine nucleotide exchange factor (GEF) activity and its ability to bind clathrin. Acts as a GEF for Arf and Rab, by exchanging bound GDP for free GTP. Binds phosphatidylinositol 4,5-bisphosphate, which is required for GEF activity. May also act as a E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.::Homo sapiens (taxid: 9606) confident COG5184::ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] 100.00::4-105 PF00632::HECT 99.66::258-489 GO:0005737::cytoplasm confident hh_3kci_A_2::22-89,91-94,97-117,140-140,167-176,188-193,238-241,265-298,305-305,308-346,367-368,373-373,398-473,475-505 very confident psy16692 1149 Q6PAV2::Probable E3 ubiquitin-protein ligase HERC4 ::Probable E3 ubiquitin-protein ligase involved in either protein trafficking or in the distribution of cellular structures. Required for spermatozoon maturation and fertility, and for the removal of the cytoplasmic droplet of the spermatozoon. E3 ubiquitin-protein ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer it to targeted substrates.::Mus musculus (taxid: 10090) portable COG5184::ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] 100.00::1-313 PF00632::HECT 99.34::689-817 GO:0031965::nuclear membrane confident hh_1a12_A_1::1-44,46-47,49-58,71-97,99-109,112-165,168-194,196-224,226-255,275-275,278-312 very confident psy14091 694 Q9FN03::Ultraviolet-B receptor UVR8 ::UV-B specific signaling component that acts as UV-B photoreceptor and plays a key role in establishing UV-protective responses in plants. Upon UV-B irradiation, UVR8 undergoes an immediate switch from homodimer to monomer, accumulates in the nucleus, interacts with the photomorphogenic repressor COP1 and regulates the expression of the transcription factor HY5 by associating with chromatin (through histone H2B binding) in the HY5 promoter region. UVR8 is involved in controlling aspects of leaf growth and morphogenesis in response to UV-B, is required for normal progression of endocycle and has a regulatory role in stomatal differentiation. Is required for plant circadian clock response to photomorphogenic UV-B light, partly through the transcriptional activation of responsive clock genes. Promotes photosynthetic efficiency at elevated levels of UV-B. Plays a role in mediating the effects of UV-B radiation on pathogen resistance by controlling the expression of the sinapate biosynthetic pathway. The two tryptophans, Trp-285 and Trp-233, serve collectively as the UV-B chromophore.::Arabidopsis thaliana (taxid: 3702) portable COG5184::ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] 100.00::93-685 PF13540::RCC1_2 99.14::639-668 GO:0031965::nuclear membrane confident hh_1a12_A_1::36-80,85-132,135-182,185-234,274-274,344-410,425-468,479-479,483-485,492-494,583-658 very confident psy5892 340 Q96I51::Williams-Beuren syndrome chromosomal region 16 protein ::::Homo sapiens (taxid: 9606) confident COG5184::ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] 100.00::2-335 PF13540::RCC1_2 99.29::290-319 GO:0031981::nuclear lumen confident hh_1a12_A_2::6-17,20-24,27-46,53-61,67-110,114-119,121-122,124-172,176-265,267-279,286-336 very confident psy18158 654 Q9BWT3::Poly(A) polymerase gamma ::Responsible for the post-transcriptional adenylation of the 3'-terminal of mRNA precursors and several small RNAs including signal recognition particle (SRP) RNA, nuclear 7SK RNA, U2 small nuclear RNA, and ribosomal 5S RNA.::Homo sapiens (taxid: 9606) confident COG5186::PAP1 Poly(A) polymerase [RNA processing and modification] 100.00::26-529 PF04928::PAP_central 100.00::26-374 GO:0003723::RNA binding confident hh_1q79_A_1::22-435,452-453,461-499,504-539 very confident psy17612 449 Q7QIL8::Eukaryotic translation initiation factor 3 subunit E ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) very confident COG5187::RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] 100.00::11-321 PF01399::PCI 99.64::176-293 GO:0005829::cytosol confident hh_4b4t_R_1::6-51,53-89,92-112,116-126,130-171,174-239,253-322 confident psy3716 436 Q54NQ0::26S proteasome non-ATPase regulatory subunit 13 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Dictyostelium discoideum (taxid: 44689) confident COG5187::RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] 97.56::95-347 PF01399::PCI 99.59::243-346 GO:0006511::ubiquitin-dependent protein catabolic process confident no hit no match psy5242 217 Q7QGK4::Eukaryotic translation initiation factor 3 subunit K ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) very confident COG5187::RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] 91.20::95-193 PF10075::PCI_Csn8 100.00::61-199 GO:0003743::translation initiation factor activity very confident hh_1rz4_A_1::1-216 very confident psy9207 125 Q7KTH8::COP9 signalosome complex subunit 8 ::Probable component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. The CSN complex plays an essential role in oogenesis and embryogenesis and is required for proper photoreceptor R cell differentiation and promote lamina glial cell migration or axon targeting. It also promotes Ubl-dependent degradation of cyclin E (CycE) during early oogenesis.::Drosophila melanogaster (taxid: 7227) confident COG5187::RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] 97.43::3-121 PF10075::PCI_Csn8 99.96::3-100 GO:0005634::nucleus confident hh_1rz4_A_1::2-31,34-124 confident psy396 239 Q3T0B2::26S proteasome non-ATPase regulatory subunit 6 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Bos taurus (taxid: 9913) portable COG5187::RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] 100.00::1-237 PF10602::RPN7 99.82::1-73 GO:0000502::proteasome complex confident hh_4b4t_R_1::2-86,88-191,193-194,206-207,211-239 very confident psy398 162 Q3T0B2::26S proteasome non-ATPase regulatory subunit 6 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Bos taurus (taxid: 9913) portable COG5187::RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] 100.00::1-161 PF10602::RPN7 100.00::17-161 GO:0000502::proteasome complex confident hh_4b4t_R_1::1-44,47-78,80-102,104-122,125-161 very confident psy11733 971 Q9VVU5::COP9 signalosome complex subunit 1b ::Essential component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. The CSN complex plays an essential role in oogenesis and embryogenesis and is required for proper photoreceptor R cell differentiation and promote lamina glial cell migration or axon targeting. It also promotes Ubl-dependent degradation of cyclin E (CycE) during early oogenesis.::Drosophila melanogaster (taxid: 7227) confident COG5187::RPN7 26S proteasome regulatory complex component, contains PCI domain [Posttranslational modification, protein turnover, chaperones] 100.00::142-468 PF10602::RPN7 100.00::146-324 GO:0010388::cullin deneddylation confident hh_4b4t_R_1::56-90,107-107,126-136,139-255,260-288,290-468 very confident psy7416 381 Q9D554::Splicing factor 3A subunit 3 ::Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex.::Mus musculus (taxid: 10090) confident COG5188::PRP9 Splicing factor 3a, subunit 3 [RNA processing and modification] 100.00::131-351 PF11931::DUF3449 100.00::174-351 GO:0044763::single-organism cellular process confident hh_4dgw_A_2::134-143,151-160,162-214 confident psy7022 124 Q96NC0::Zinc finger matrin-type protein 2 ::::Homo sapiens (taxid: 9606) very confident COG5188::PRP9 Splicing factor 3a, subunit 3 [RNA processing and modification] 97.52::2-31 PF12171::zf-C2H2_jaz 98.87::3-29 GO:0008270::zinc ion binding confident hh_2yrm_A_1::3-24 portable psy12165 537 Q5R5U3::Zinc finger protein 271 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.32::164-230 PF05605::zf-Di19 98.32::455-512 GO:0005634::nucleus confident hh_2i13_A_2::281-294,299-320,322-353,357-411,423-445,447-475,477-480,486-489 very confident psy4065 348 Q9Y2Q1::Zinc finger protein 257 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.82::113-171 PF05605::zf-Di19 98.47::114-175 GO:0005634::nucleus confident hh_2dlq_A_1::2-31,40-68,110-139,148-176 very confident psy12195 254 Q95LI3::Zinc finger Y-chromosomal protein ::Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.::Bos taurus (taxid: 9913) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.94::186-239 PF05605::zf-Di19 98.93::189-244 GO:0005730::nucleolus confident hh_2i13_A_1::60-67,71-95,97-129,131-132,134-210,212-215,217-239,241-249 very confident psy10075 373 O62836::Zinc finger X-chromosomal protein ::Probable transcriptional activator.::Bos taurus (taxid: 9913) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.59::259-310 PF05605::zf-Di19 98.42::291-342 GO:0008270::zinc ion binding confident hh_2i13_A_1::155-161,163-190,192-219,221-225,228-254,258-281,283-342 very confident psy2238 311 Q32LC9::Zinc finger protein 330 ::::Bos taurus (taxid: 9913) very confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.86::170-230 PF06524::NOA36 100.00::1-242 GO:0030496::midbody very confident hh_2i13_A_1::28-54,56-73,77-91,95-121,142-165,168-174,186-239 very confident psy16646 159 O75467::Zinc finger protein 324A ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.92::86-138 PF13465::zf-H2C2_2 98.69::105-129 GO:0000122::negative regulation of transcription from RNA polymerase II promoter confident hh_2kmk_A_1::62-117,119-143 confident psy4019 109 P19538::Transcriptional activator cubitus interruptus ::Has a dual function as a transcriptional activator and a repressor of the hedgehog (Hh) pathway. The full-length ci form (ciFL), acts as an activator (ciA) while ciR, its C-terminally truncated form, acts as a repressor. Involved in segment polarity. Required for the normal development of the posterior half of each embryonic segment. Engrailed protein directly represses ci expression in posterior compartment cells.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.97::12-78 PF13465::zf-H2C2_2 98.80::32-68 GO:0000122::negative regulation of transcription from RNA polymerase II promoter confident hh_2gli_A_1::2-49,62-90 very confident psy8181 361 Q60636::PR domain zinc finger protein 1 ::Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.::Mus musculus (taxid: 10090) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.39::314-361 PF13465::zf-H2C2_2 98.50::331-356 GO:0000122::negative regulation of transcription from RNA polymerase II promoter confident hh_1ubd_C_1::230-255,257-346 very confident psy3946 127 Q505G8::Zinc finger protein 827 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.99::49-102 PF13465::zf-H2C2_2 98.73::68-92 GO:0000790::nuclear chromatin confident hh_1f2i_G_1::37-105 very confident psy8183 223 Q5T0B9::Zinc finger protein 362 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.51::18-104 PF13465::zf-H2C2_2 98.76::9-34 GO:0000977::RNA polymerase II regulatory region sequence-specific DNA binding confident hh_2rpc_A_1::1-26,29-77,81-114 very confident psy7353 139 P42282::Protein tramtrack, alpha isoform ::Binds to a number of sites in the transcriptional regulatory region of ftz. Isoform alpha is required to repress genes that promote the R7 cell fate. Probable repressor of the transcription of the segmentation genes ftz, eve, h, odd, run, and en. May bind to the region 5'-AGGG[CT]GG-3'. Degradation of ttk is directed by binding of sinah or sina, via the adapter molecule phyl which binds to the BTB domain of ttk.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.97::80-135 PF13465::zf-H2C2_2 98.76::98-122 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_2rpc_A_1::12-26,32-49,52-104,106-137 very confident psy3492 85 Q7YU81::Protein charlatan ::Probable transcription factor involved in the development of the adult pattern of macrochaetae. Required for accumulation of achaete (ac) and scute (sc) in proneural clusters. Probably acts by binding to the proneural cluster-specific enhancers of the ac/sc complex and increasing enhancer efficiency, thereby acting as a stimulator of ac/sc expression in proneural clusters. Also required for correct development of the embryonic/larval peripheral nervous system (PNS).::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.24::23-71 PF13465::zf-H2C2_2 98.80::13-35 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_2rpc_A_1::1-44,46-80 confident psy2103 203 P10073::Zinc finger and SCAN domain-containing protein 22 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.93::47-103 PF13465::zf-H2C2_2 98.87::8-32 GO:0003676::nucleic acid binding confident hh_2i13_A_1::2-70,76-106 very confident psy12647 410 Q3ZCX4::Zinc finger protein 568 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.27::379-406 PF13465::zf-H2C2_2 98.78::369-394 GO:0003676::nucleic acid binding confident hh_2i13_A_1::184-214,216-265,283-294,296-301,304-345,347-383 very confident psy12018 148 P08048::Zinc finger Y-chromosomal protein ::Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.25::88-140 PF13465::zf-H2C2_2 98.76::105-131 GO:0003677::DNA binding confident hh_2yt9_A_1::30-59,61-61,89-145 very confident psy16578 177 P18737::Gastrula zinc finger protein XlCGF8.2DB (Fragment) ::May be involved in transcriptional regulation.::Xenopus laevis (taxid: 8355) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.79::77-143 PF13465::zf-H2C2_2 98.90::138-164 GO:0003677::DNA binding confident hh_2dlq_A_1::45-77,79-103,118-148,150-177 very confident psy16601 177 P18737::Gastrula zinc finger protein XlCGF8.2DB (Fragment) ::May be involved in transcriptional regulation.::Xenopus laevis (taxid: 8355) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.79::77-143 PF13465::zf-H2C2_2 98.90::138-164 GO:0003677::DNA binding confident hh_2dlq_A_1::45-77,79-103,118-148,150-177 very confident psy12016 111 Q64318::Zinc finger E-box-binding homeobox 1 ::Acts as a transcriptional repressor. Binds to E-box sequences in the immunoglobulin heavy chain enhancer as well as in the regulatory regions of many other tissue-specific genes. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1 (By similarity). Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). Promotes tumorigenicity by repressing stemness-inhibiting microRNAs.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.79::17-103 PF13465::zf-H2C2_2 98.79::7-30 GO:0003677::DNA binding confident hh_2kmk_A_1::19-47,54-80,82-107 very confident psy16849 371 Q60793::Krueppel-like factor 4 ::Transcription factor; can act both as activator and as repressor. Binds the 5'-CACCC-3' core sequence. Binds to the promoter region of its own gene and can activate its own transcription. Regulates the expression of key transcription factors during embryonic development. Plays an important role in maintaining embryonic stem cells, and in preventing their differentiation. Required for establishing the barrier function of the skin and for postnatal maturation and maintenance of the ocular surface. Involved in the differentiation of epithelial cells and may also function in skeletal and kidney development. Contributes to the down-regulation of p53/TP53 transcription.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.68::265-321 PF13465::zf-H2C2_2 98.32::285-312 GO:0003690::double-stranded DNA binding confident hh_1ubd_C_1::219-328 very confident psy8050 311 Q24732::Protein glass ::Transcription factor required for gene expression specific to photoreceptor cells.::Drosophila virilis (taxid: 7244) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.81::264-283 PF13465::zf-H2C2_2 98.51::214-239 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity very confident rp_2i13_A_1::122-250 very confident psy1793 135 B2RUI1::Zinc finger protein 551 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.41::31-82 PF13465::zf-H2C2_2 98.85::50-73 GO:0005634::nucleus confident hh_2dmd_A_1::29-106 very confident psy16400 145 P42283::Longitudinals lacking protein, isoform G ::Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.96::47-99 PF13465::zf-H2C2_2 98.45::95-118 GO:0005634::nucleus confident hh_2kmk_A_1::50-75,78-129 very confident psy1773 359 P98169::Zinc finger X-linked protein ZXDB ::Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.69::264-353 PF13465::zf-H2C2_2 98.59::313-341 GO:0005634::nucleus confident hh_2i13_A_1::159-179,182-201,203-210,213-231,233-257,259-270,273-288,290-301,304-325,327-332,335-356 very confident psy14939 971 Q03112::MDS1 and EVI1 complex locus protein EVI1 ::Functions as a transcriptional regulator binding to DNA sequences in the promoter region of target genes and regulating positively or negatively their expression. Oncogene which plays a role in development, cell proliferation and differentiation. May also play a role in apoptosis through regulation of the JNK and TGF-beta signaling. Involved in hematopoiesis.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.58::760-840 PF13465::zf-H2C2_2 98.69::777-801 GO:0005634::nucleus confident hh_2i13_A_1::17-80,82-114,196-247,249-282 very confident psy15135 1000 Q05481::Zinc finger protein 91 ::::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.41::874-897 PF13465::zf-H2C2_2 98.83::863-888 GO:0005634::nucleus confident hh_2i13_A_1::668-675,677-678,682-736,752-753,755-785,817-837,842-905 very confident psy11590 555 Q05481::Zinc finger protein 91 ::::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.20::436-462 PF13465::zf-H2C2_2 98.63::483-508 GO:0005634::nucleus confident hh_2i13_A_1::381-460,462-465,467-525 very confident psy7453 200 Q08705::Transcriptional repressor CTCF ::Acts as both a transcriptional activator and repressor of the MYC gene.::Gallus gallus (taxid: 9031) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.84::108-197 PF13465::zf-H2C2_2 99.00::162-187 GO:0005634::nucleus confident hh_2i13_A_1::47-67,71-123,125-131,138-138,140-200 very confident psy12199 597 Q14588::Zinc finger protein 234 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.41::417-488 PF13465::zf-H2C2_2 98.70::535-560 GO:0005634::nucleus confident hh_2i13_A_2::109-151,158-168,171-180,182-196,198-269,274-283,287-292,294-306 very confident psy6751 392 Q14590::Zinc finger protein 235 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.34::325-352 PF13465::zf-H2C2_2 98.60::316-339 GO:0005634::nucleus confident hh_1tf6_A_1::187-325,329-354 very confident psy10073 144 Q2EI20::RE1-silencing transcription factor ::Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells.::Danio rerio (taxid: 7955) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.78::84-135 PF13465::zf-H2C2_2 99.05::101-126 GO:0005634::nucleus confident hh_2kmk_A_1::50-66,68-75,87-139 confident psy13123 129 Q3ZCX4::Zinc finger protein 568 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.24::70-120 PF13465::zf-H2C2_2 99.01::87-111 GO:0005634::nucleus confident hh_2i13_A_1::9-129 very confident psy9360 236 Q58DZ6::Zinc finger protein 143 ::Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.::Xenopus tropicalis (taxid: 8364) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.98::187-235 PF13465::zf-H2C2_2 98.86::178-203 GO:0005634::nucleus confident hh_1tf6_A_1::69-217,220-235 very confident psy13090 771 Q5MCW4::Zinc finger protein 569 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.29::683-767 PF13465::zf-H2C2_2 98.76::48-72 GO:0005634::nucleus confident hh_2i13_A_2::544-597,628-710,712-744 very confident psy64 115 Q5R5S6::Zinc finger protein 540 ::May act as a transcriptional repressor.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.33::56-108 PF13465::zf-H2C2_2 99.09::74-98 GO:0005634::nucleus confident hh_2kmk_A_1::17-40,55-112 very confident psy4412 39 Q5RAU9::Zinc finger protein 131 ::May be involved in transcriptional regulation. Plays a role during development and organogenesis as well as in the function of the adult central nervous system.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.75::3-26 PF13465::zf-H2C2_2 98.95::21-39 GO:0005634::nucleus confident hh_1llm_C_1::4-39 very confident psy11591 220 Q6ZMW2::Zinc finger protein 782 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.69::139-189 PF13465::zf-H2C2_2 98.77::157-180 GO:0005634::nucleus confident hh_1tf6_A_2::1-49,51-138,142-167 very confident psy2973 514 Q96MU6::Zinc finger protein 778 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.45::194-273 PF13465::zf-H2C2_2 98.24::269-292 GO:0005634::nucleus confident hh_2i13_A_1::212-216,218-333,366-390,419-423,426-455 very confident psy691 134 Q9BRP0::Transcription factor Ovo-like 2 ::DNA-binding protein that binds to the 5'-G[GCT]GGGGG-3' core sequence. Probably acts as a transcription regulator.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.37::56-109 PF13465::zf-H2C2_2 99.05::74-98 GO:0005634::nucleus confident hh_2kmk_A_1::59-132 very confident psy4084 86 Q9NQV6::PR domain zinc finger protein 10 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.81::24-71 PF13465::zf-H2C2_2 99.14::13-37 GO:0005634::nucleus confident hh_1a1h_A_1::3-79 very confident psy4681 1930 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 95.77::572-596 PF13465::zf-H2C2_2 98.23::1256-1279 GO:0005634::nucleus confident hh_2rpc_A_1::1180-1217,1239-1328 very confident psy9788 3771 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 95.55::554-580 PF13465::zf-H2C2_2 98.13::175-198 GO:0005634::nucleus confident hh_2rpc_A_1::127-213,215-244,246-249 very confident psy4686 2028 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.40::1787-1844 PF13465::zf-H2C2_2 98.62::1988-2013 GO:0005634::nucleus confident hh_2rpc_A_1::1881-1909,1913-2005 very confident psy8946 3962 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.15::3893-3949 PF13465::zf-H2C2_2 97.95::3912-3936 GO:0005634::nucleus confident hh_2rpc_A_1::1348-1473 very confident psy2414 114 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 95.73::60-111 PF13465::zf-H2C2_2 98.32::75-103 GO:0005634::nucleus confident hh_2ct1_A_1::32-88 very confident psy16775 306 Q21502::MOG interacting and ectopic P-granules protein 1 ::Has a broad role in development, specifically in the genetic pathway SynMuvB that negatively regulates specification of the vulval cell fate. Required for fem-3 3'-UTR-mediated repression in the regulation of the sperm/oocyte switch. Acts by regulating the translation of fem-3 mRNA, by binding to its 3'-UTR.::Caenorhabditis elegans (taxid: 6239) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.85::183-238 PF13465::zf-H2C2_2 98.39::14-45 GO:0005700::polytene chromosome confident hh_2i13_A_1::106-127,129-131,141-165,179-203,205-208,214-245 very confident psy553 129 A2VDQ7::Zinc finger protein 420 ::May be involved in transcriptional regulation.::Bos taurus (taxid: 9913) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.41::83-106 PF13465::zf-H2C2_2 98.89::74-98 GO:0005730::nucleolus confident hh_2cot_A_1::24-90 very confident psy4573 306 C9JN71::Zinc finger protein 878 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.16::230-282 PF13465::zf-H2C2_2 98.47::223-242 GO:0005730::nucleolus confident hh_2i13_A_1::57-127,178-290 very confident psy16685 99 O60304::Zinc finger protein 500 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.86::11-62 PF13465::zf-H2C2_2 99.05::1-24 GO:0005730::nucleolus confident hh_2epa_A_1::6-64 very confident psy7466 338 P47043::Zinc-responsive transcriptional regulator ZAP1 ::Involved in zinc ion homeostasis by zinc-responsive transcriptional regulation.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.91::248-302 PF13465::zf-H2C2_2 98.49::128-153 GO:0005730::nucleolus confident hh_2i13_A_1::108-161,186-213,215-219,222-269,271-274,276-307 very confident psy16834 488 P51523::Zinc finger protein 84 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.60::415-466 PF13465::zf-H2C2_2 98.96::432-457 GO:0005730::nucleolus confident hh_2i13_A_2::245-304,333-381,383-446 very confident psy10762 126 P51523::Zinc finger protein 84 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.99::62-113 PF13465::zf-H2C2_2 99.05::79-103 GO:0005730::nucleolus confident hh_2kmk_A_1::36-117 very confident psy14386 344 Q3ZCX4::Zinc finger protein 568 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.82::248-341 PF13465::zf-H2C2_2 98.99::308-333 GO:0005730::nucleolus confident hh_1tf6_A_2::163-277,280-286,297-318,322-344 very confident psy8251 434 Q3ZCX4::Zinc finger protein 568 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.87::59-138 PF13465::zf-H2C2_2 98.36::105-128 GO:0005730::nucleolus confident hh_2i13_A_1::12-29,31-49,51-52,57-145,164-165,167-170,177-195 very confident psy10074 420 Q5R5U3::Zinc finger protein 271 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.02::345-399 PF13465::zf-H2C2_2 98.34::364-388 GO:0005730::nucleolus confident hh_2i13_A_1::184-224,256-277,279-307,309-313,318-369,371-397,399-407 very confident psy3356 180 Q6NX49::Zinc finger protein 544 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.47::125-180 PF13465::zf-H2C2_2 98.81::143-174 GO:0005730::nucleolus confident hh_2jp9_A_1::50-89,95-150 very confident psy63 585 Q8NB50::Zinc finger protein 62 homolog ::May play a role in differentiating skeletal muscle.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.50::491-556 PF13465::zf-H2C2_2 98.75::551-576 GO:0005730::nucleolus confident hh_1tf6_A_1::376-519,537-562 very confident psy12196 150 Q8TF68::Zinc finger protein 384 ::Transcription factor that binds the consensus DNA sequence [GC]AAAAA. Seems to bind and regulate the promoters of MMP1, MMP3, MMP7 and COL1A1.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.71::55-135 PF13465::zf-H2C2_2 98.83::73-96 GO:0005730::nucleolus confident hh_2i13_A_1::2-24,27-112,115-144 very confident psy8702 194 Q91ZD1::Protein odd-skipped-related 2 ::::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.80::82-153 PF13465::zf-H2C2_2 98.45::43-68 GO:0005730::nucleolus confident hh_2i13_A_1::18-33,42-80,82-133,135-167 very confident psy17050 295 Q96NG8::Zinc finger protein 582 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.02::112-169 PF13465::zf-H2C2_2 98.54::74-97 GO:0005730::nucleolus confident hh_1tf6_A_1::18-49,55-138,145-173,180-204 very confident psy13164 193 A2T6V8::Zinc finger and SCAN domain-containing protein 12 ::May be involved in transcriptional regulation.::Pan troglodytes (taxid: 9598) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.94::160-181 PF13465::zf-H2C2_2 98.65::149-172 GO:0005737::cytoplasm confident hh_2dlq_A_1::56-77,100-188 very confident psy12166 94 A2T736::Zinc finger protein 192 ::May be involved in transcriptional regulation.::Pan troglodytes (taxid: 9598) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.79::27-79 PF13465::zf-H2C2_2 98.90::44-70 GO:0005737::cytoplasm confident hh_2lce_A_1::22-49,51-87 very confident psy16147 227 G5EBU4::Zinc finger E-box-binding homebox protein zag-1 ::Down-regulates expression of genes involved in either the synthesis or reuptake of serotonin, dopamine and GABA. Acts as a transcriptional repressor to regulate multiple, discrete, neuron-specific aspects of terminal differentiation, including cell migration, axonal development and gene expression. Required for axon guidance. Involved in the proper development of the pharynx. Directly represses its own transcription by interacting with conserved E-box sequence motifs 5'-CACCTG-3' in its own promoter.::Caenorhabditis elegans (taxid: 6239) very confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.62::166-219 PF13465::zf-H2C2_2 98.70::183-206 GO:0005737::cytoplasm confident hh_2rpc_A_1::36-70,133-216,218-226 very confident psy16829 243 O75437::Zinc finger protein 254 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.23::168-222 PF13465::zf-H2C2_2 98.74::187-212 GO:0005737::cytoplasm confident hh_2i13_A_1::50-109,111-198,201-228 very confident psy2876 367 O75437::Zinc finger protein 254 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.08::227-247 PF13465::zf-H2C2_2 98.52::21-44 GO:0005737::cytoplasm confident hh_2i13_A_1::18-198,200-202 very confident psy16225 290 P39768::Pair-rule protein odd-paired ::Transcription factor essential for parasegmental subdivision of the embryo. It is involved in the activation of wingless (wg) in odd parasegments. It is also required for the timely activation of wg in the remaining parasegments and for the timely activation of engrailed (en) in all parasegments.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 95.31::195-285 PF13465::zf-H2C2_2 98.15::249-276 GO:0005737::cytoplasm confident rp_2rpc_A_1::183-288 very confident psy12834 275 P51786::Zinc finger protein 157 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.28::172-252 PF13465::zf-H2C2_2 98.71::218-242 GO:0005737::cytoplasm confident hh_2i13_A_1::28-38,40-136,156-166,168-195,197-232 very confident psy9067 189 Q08705::Transcriptional repressor CTCF ::Acts as both a transcriptional activator and repressor of the MYC gene.::Gallus gallus (taxid: 9031) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.74::133-184 PF13465::zf-H2C2_2 98.82::150-175 GO:0005737::cytoplasm confident hh_1tf6_A_1::6-13,15-85,101-160,164-188 very confident psy3231 420 Q09FC8::Zinc finger protein 415 ::Involved in transcriptional regulation. Transcriptional activity differed among the various isoforms. All isoforms except isoform 3 seem to suppresses the transcriptional activities of AP-1 and p53/TP53.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.29::259-309 PF13465::zf-H2C2_2 98.77::390-414 GO:0005737::cytoplasm confident hh_2i13_A_1::229-282,284-361,370-404 very confident psy7463 319 Q1H9T6::Zinc finger and BTB domain-containing protein 48 ::Binds to and regulates the J and/or S elements in MHC II promoter.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.37::177-227 PF13465::zf-H2C2_2 98.67::29-54 GO:0005737::cytoplasm confident hh_2i13_A_2::55-93,121-142,144-151,153-227,229-259 very confident psy16828 372 Q5MCW4::Zinc finger protein 569 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.21::18-102 PF13465::zf-H2C2_2 98.68::279-303 GO:0005737::cytoplasm confident hh_2i13_A_2::165-170,172-229,231-320,322-349 very confident psy1798 353 Q5R5U3::Zinc finger protein 271 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.20::40-75 PF13465::zf-H2C2_2 98.69::310-335 GO:0005737::cytoplasm confident hh_2i13_A_1::128-161,163-168,172-186,189-201,204-256,290-352 very confident psy8466 431 Q5R8X1::Zinc finger protein 665 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.60::358-407 PF13465::zf-H2C2_2 98.58::402-426 GO:0005737::cytoplasm confident hh_2i13_A_1::238-415 very confident psy7185 311 Q61116::Zinc finger protein 235 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.42::285-309 PF13465::zf-H2C2_2 98.82::275-300 GO:0005737::cytoplasm confident hh_2i13_A_1::139-257,263-311 very confident psy15165 606 Q6ZNG1::Zinc finger protein 600 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.01::498-552 PF13465::zf-H2C2_2 98.56::547-571 GO:0005737::cytoplasm confident hh_2i13_A_1::350-358,363-418,437-440,442-472,501-521,523-524,528-588 very confident psy4683 196 Q6ZSB9::Zinc finger and BTB domain-containing protein 49 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.88::82-161 PF13465::zf-H2C2_2 98.82::128-151 GO:0005737::cytoplasm confident hh_2dlq_A_1::51-75,77-165 very confident psy12023 55 Q7KQZ4::Longitudinals lacking protein, isoforms A/B/D/L ::Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.96::1-51 PF13465::zf-H2C2_2 99.28::16-42 GO:0005737::cytoplasm confident hh_2drp_A_1::1-29,31-55 very confident psy4796 274 Q8BQN6::Zinc finger protein OZF ::::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.67::218-270 PF13465::zf-H2C2_2 98.87::235-259 GO:0005737::cytoplasm confident hh_1tf6_A_1::59-142,186-245,249-274 very confident psy18077 451 Q96MU6::Zinc finger protein 778 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.35::292-344 PF13465::zf-H2C2_2 98.65::310-335 GO:0005737::cytoplasm confident hh_2i13_A_1::245-282,291-348,364-391,395-451 very confident psy4830 292 Q96RE9::Zinc finger protein 300 ::Has a transcriptional repressor activity.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.99::212-233 PF13465::zf-H2C2_2 99.00::201-224 GO:0005737::cytoplasm confident hh_1tf6_A_2::3-116,181-210,214-239 very confident psy5202 343 Q9H165::B-cell lymphoma/leukemia 11A ::Functions as a myeloid and B-cell proto-oncogene. May play important roles in leukemogenesis and hematopoiesis. An essential factor in lymphopoiesis, is required for B-cell formation in fetal liver. May function as a modulator of the transcriptional repression activity of ARP1.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.04::211-265 PF13465::zf-H2C2_2 98.84::200-224 GO:0005737::cytoplasm confident hh_2i13_A_1::86-169,180-237,240-270 very confident psy3491 108 Q9UL36::Zinc finger protein 236 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.39::46-99 PF13465::zf-H2C2_2 98.58::64-90 GO:0005737::cytoplasm confident hh_2ct1_A_1::42-105 very confident psy12028 118 Q9V5M3::Longitudinals lacking protein, isoforms N/O/W/X/Y ::Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.::Drosophila melanogaster (taxid: 7227) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.14::28-112 PF13465::zf-H2C2_2 99.11::77-103 GO:0005737::cytoplasm confident hh_2yt9_A_1::27-51,56-87,89-116 very confident psy12639 134 P13360::Protein glass ::Transcription factor required for gene expression specific to photoreceptor cells.::Drosophila melanogaster (taxid: 7227) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.16::10-91 PF13465::zf-H2C2_2 98.91::1-24 GO:0005739::mitochondrion confident hh_2kmk_A_1::13-35,37-95 very confident psy14147 100 Q9UK10::Zinc finger protein 225 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.78::26-98 PF13465::zf-H2C2_2 99.26::72-97 GO:0005739::mitochondrion confident hh_1x6e_A_1::19-48,50-84 very confident psy1991 366 Q60843::Krueppel-like factor 2 ::Binds to the CACCC box in the beta-globin gene promoter and activates transcription.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.62::311-364 PF13465::zf-H2C2_2 98.39::330-355 GO:0005794::Golgi apparatus confident hh_2rpc_A_1::229-260,262-267,282-288,291-366 very confident psy4407 130 P33749::Zinc finger protein MSN4 ::Positive transcriptional factor that acts as a component of the stress responsive system. Recognizes and binds to the stress response element (STRE) which is involved in the response to various forms of stress (heat, oxidative, osmotic, etc.). Involved in the regulation of the CTT1, DDR2, HSP12 genes.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.30::65-115 PF13465::zf-H2C2_2 98.77::82-107 GO:0006325::chromatin organization confident hh_1a1h_A_1::29-52,60-115,117-121,124-126 very confident psy10072 84 Q7TS63::Zinc finger protein ZFAT ::May be involved in transcriptional regulation. Overexpression causes down-regulation of a number of genes involved in the immune response. Some genes are also up-regulated.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.72::11-61 PF13465::zf-H2C2_2 99.31::1-25 GO:0006325::chromatin organization confident hh_2rpc_A_1::1-72 very confident psy6556 836 A8MQ14::Zinc finger protein 850 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.11::687-766 PF13465::zf-H2C2_2 98.48::703-728 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_2::408-530,596-656 very confident psy17740 384 O89091::Krueppel-like factor 10 ::Transcriptional repressor involved in the regulation of cell growth. Inhibits cell growth.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.59::291-344 PF13465::zf-H2C2_2 98.43::310-334 GO:0006355::regulation of transcription, DNA-dependent confident hh_2jp9_A_1::260-374 very confident psy359 405 P52742::Zinc finger protein 135 ::Plays a role in the regulation of cell morphology and cytoskeletal organization. May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.11::276-363 PF13465::zf-H2C2_2 98.56::358-381 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_1::187-240,276-299,335-399 very confident psy6628 132 Q14588::Zinc finger protein 234 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.97::73-124 PF13465::zf-H2C2_2 99.03::90-115 GO:0006355::regulation of transcription, DNA-dependent confident hh_2rpc_A_1::7-47,51-66,68-132 very confident psy3500 98 Q5R5U3::Zinc finger protein 271 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.45::44-95 PF13465::zf-H2C2_2 99.10::62-85 GO:0006355::regulation of transcription, DNA-dependent confident hh_2cot_A_1::12-77 very confident psy16923 159 Q5RAE6::Zinc finger protein 24 ::Transcription factor required for myelination of differentiated oligodendrocytes. Required for the conversion of oligodendrocytes from the premyelinating to the myelinating state. In the developing central nervous system (CNS), involved in the maintenance in the progenitor stage by promoting the cell cycle. Specifically bind to the 5'-TCAT-3' DNA sequence. Has transcription repressor activity in vitro.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.91::49-99 PF13465::zf-H2C2_2 98.87::11-33 GO:0006355::regulation of transcription, DNA-dependent confident hh_2rpc_A_1::3-104 very confident psy4574 343 Q6ZMW2::Zinc finger protein 782 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.30::280-331 PF13465::zf-H2C2_2 98.62::298-321 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_1::161-207,219-339 very confident psy12019 87 Q7KQZ4::Longitudinals lacking protein, isoforms A/B/D/L ::Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.88::60-86 PF13465::zf-H2C2_2 99.13::48-74 GO:0006355::regulation of transcription, DNA-dependent confident hh_1bbo_A_1::33-61,63-87 very confident psy366 734 Q8C827::Zinc finger protein 62 ::May play a role in differentiating skeletal muscle.::Mus musculus (taxid: 10090) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.12::704-726 PF13465::zf-H2C2_2 98.63::664-688 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_2::517-555,558-583,585-645,648-697,699-707 very confident psy12030 245 Q8CJ78::Zinc finger protein 628 ::Transcription activator. Binds DNA on GT-box consensus sequence 5'-TTGGTT-3'.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.57::203-245 PF13465::zf-H2C2_2 98.87::221-244 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_1::54-94,96-146,148-201,203-234 very confident psy11761 198 Q8N823::Zinc finger protein 611 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.42::97-162 PF13465::zf-H2C2_2 98.46::86-110 GO:0006355::regulation of transcription, DNA-dependent confident hh_2rpc_A_1::41-111,125-136,138-172 very confident psy14244 226 Q8N823::Zinc finger protein 611 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.87::69-162 PF13465::zf-H2C2_2 98.72::86-110 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_1::12-111,125-136,138-191 very confident psy6546 294 Q8N895::Zinc finger protein 366 ::Has transcriptional repression activity. Acts as corepressor of ESR1; the function seems to involve CTBP1 and histone deacetylases.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.46::28-116 PF13465::zf-H2C2_2 98.39::246-269 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_1::110-287 very confident psy13347 339 Q90WR8::Transcription factor Sp3 ::Transcriptional factor that can act as an activator or repressor depending on post-translational modifications. Binds to GT and GC boxes promoter elements. Competes with SP1 for the GC-box promoters. Weak activator of transcription (By similarity). Required for activation of SPARC transcription.::Gallus gallus (taxid: 9031) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.08::206-230 PF13465::zf-H2C2_2 98.45::152-178 GO:0006355::regulation of transcription, DNA-dependent confident hh_2rpc_A_1::133-140,143-169,172-188,203-258 very confident psy13793 337 Q9NW07::Zinc finger protein 358 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.67::260-311 PF13465::zf-H2C2_2 98.85::278-303 GO:0006355::regulation of transcription, DNA-dependent confident hh_2i13_A_1::62-101,178-311,313-320 very confident psy8966 175 Q58DZ6::Zinc finger protein 143 ::Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.::Xenopus tropicalis (taxid: 8364) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.02::95-150 PF13465::zf-H2C2_2 98.97::144-168 GO:0006357::regulation of transcription from RNA polymerase II promoter confident hh_2i13_A_1::2-15,18-46,49-101,104-130,133-170 very confident psy11352 107 Q91ZD1::Protein odd-skipped-related 2 ::::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.83::49-99 PF13465::zf-H2C2_2 99.04::66-90 GO:0006357::regulation of transcription from RNA polymerase II promoter confident hh_2d9h_A_1::50-107 very confident psy17779 141 Q96BV0::Zinc finger protein 775 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.41::65-117 PF13465::zf-H2C2_2 98.70::83-107 GO:0006357::regulation of transcription from RNA polymerase II promoter confident hh_2ebt_A_1::34-121 very confident psy677 451 P26633::E3 SUMO-protein ligase EGR2 (Fragment) ::E3 SUMO-protein ligase helping SUMO1 conjugation to its coregulators NAB1 and NAB2, whose sumoylation down-regulates EGR2 own transcriptional activity.::Cricetulus griseus (taxid: 10029) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.10::312-394 PF13465::zf-H2C2_2 98.29::361-384 GO:0006611::protein export from nucleus confident hh_2gli_A_1::309-423 very confident psy679 510 P26633::E3 SUMO-protein ligase EGR2 (Fragment) ::E3 SUMO-protein ligase helping SUMO1 conjugation to its coregulators NAB1 and NAB2, whose sumoylation down-regulates EGR2 own transcriptional activity.::Cricetulus griseus (taxid: 10029) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.87::370-452 PF13465::zf-H2C2_2 98.15::391-414 GO:0006611::protein export from nucleus confident hh_2gli_A_1::367-480 very confident psy16294 486 P10071::Transcriptional activator GLI3 ::Has a dual function as a transcriptional activator and a repressor of the sonic hedgehog (Shh) pathway, and plays a role in limb development. The full-length GLI3 form (GLI3FL) after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while GLI3R, its C-terminally truncated form, acts as a repressor. A proper balance between the GLI3 activator and the repressor GLI3R, rather than the repressor gradient itself or the activator/repressor ratio gradient, specifies limb digit number and identity. In concert with TRPS1, plays a role in regulating the size of the zone of distal chondrocytes, in restricting the zone of PTHLH expression in distal cells and in activating chondrocyte proliferation. Binds to the minimal GLI-consensus sequence 5'-GGGTGGTC-3'.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.48::362-390 PF13465::zf-H2C2_2 98.38::353-380 GO:0007275::multicellular organismal development confident hh_2gli_A_1::218-291,308-320,322-324,334-393 very confident psy16882 318 Q8ST83::Polycomb protein PHO ::Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Drosophila melanogaster (taxid: 7227) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.22::38-93 PF13465::zf-H2C2_2 98.05::58-83 GO:0008270::zinc ion binding confident hh_1ubd_C_2::1-101 very confident psy4688 388 Q9UJU3::Zinc finger protein 112 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.82::277-334 PF13465::zf-H2C2_2 99.00::354-378 GO:0008270::zinc ion binding confident hh_2i13_A_2::201-208,210-244,251-301,303-304,310-388 very confident psy11032 514 Q9UJU3::Zinc finger protein 112 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.21::418-470 PF13465::zf-H2C2_2 98.47::436-459 GO:0008270::zinc ion binding confident hh_2i13_A_1::285-355,392-505 very confident psy13211 89 Q802Y8::Zinc finger and BTB domain-containing protein 16-A ::Probable transcription factor. Probable substrate-recognition component of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Inhibits neurogenesis.::Danio rerio (taxid: 7955) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.10::31-83 PF13465::zf-H2C2_2 98.92::21-45 GO:0009968::negative regulation of signal transduction confident hh_1llm_C_1::7-59,61-86 very confident psy11588 459 Q80W31::Zinc finger protein 569 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.40::403-453 PF13465::zf-H2C2_2 98.74::419-444 GO:0009987::cellular process confident hh_2i13_A_1::276-312,314-396,398-459 very confident psy3507 134 Q5R5U3::Zinc finger protein 271 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.89::80-131 PF13465::zf-H2C2_2 99.01::98-121 GO:0010468::regulation of gene expression confident hh_2rpc_A_1::31-134 very confident psy12022 143 Q61624::Zinc finger protein 148 ::Involved in transcriptional regulation. Represses the transcription of a number of genes including gastrin, stromelysin and enolase. Binds to the G-rich box in the enhancer region of these genes.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.19::17-39 PF13465::zf-H2C2_2 98.70::82-108 GO:0010629::negative regulation of gene expression confident hh_2yt9_A_1::15-47,68-95,97-120 very confident psy6676 144 Q9VQS7::Protein sister of odd and bowel ::Pair-rule protein that determines both the size and polarity of even-numbered as well as odd-numbered parasegments during embryogenesis. DNA-binding transcription factor that acts primarily as a transcriptional repressor but can also function as a transcriptional activator, depending on the stage of development and spatial restrictions (By similarity). May function redundantly with odd and drm in leg joint formation during the larval stages, acting downstream of Notch activation.::Drosophila melanogaster (taxid: 7227) very confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.93::26-106 PF13465::zf-H2C2_2 98.72::71-95 GO:0016348::imaginal disc-derived leg joint morphogenesis confident hh_2i13_A_1::23-109 very confident psy2643 134 O42409::Zinc finger protein Gfi-1b ::Essential transcriptional regulator necessary for development and differentiation of erythroid and megakaryocytic lineages. Alters histone methylation by recruiting histone methyltransferase to target genes promoters. Plays a role in heterochromatin formation.::Gallus gallus (taxid: 9031) very confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.98::78-103 PF13465::zf-H2C2_2 98.98::69-94 GO:0016363::nuclear matrix confident hh_2kmk_A_2::1-79 very confident psy2647 72 Q07120::Zinc finger protein Gfi-1 ::Transcription repressor essential for hematopoiesis. Functions in a cell-context and development-specific manner. Binds to 5'-TAAATCAC[AT]GCA-3' in the promoter region of a large number of genes. Component of several complexes, including the EHMT2-GFI1-HDAC1, AJUBA-GFI1-HDAC1 and RCOR-GFI-KDM1A-HDAC complexes, that suppress, via histone deacetylase (HDAC) recruitment, a number of genes implicated in multilineage blood cell development. Regulates neutrophil differentiation, promotes proliferation of lymphoid cells, and is required for granulocyte development. Mediates, together with U2AF1L4, the alternative splicing of CD45 and controls T-cell receptor signaling. Regulates the endotoxin-mediated Toll-like receptor (TLR) inflammatory response by antagonizing RELA. Cooperates with CBFA2T2 to regulate ITGB1-dependent neurite growth. Controls cell-cycle progression by repressing CDKNIA/p21 transcription in response to TGFB1 via recruitment of GFI1 by ZBTB17 to the CDKNIA/p21 promoter region. Implicated in the maintenance of inner ear hair cells.::Rattus norvegicus (taxid: 10116) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.03::9-60 PF13465::zf-H2C2_2 99.14::26-50 GO:0016363::nuclear matrix very confident hh_2rpc_A_1::3-61,63-72 very confident psy17107 986 O43345::Zinc finger protein 208 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 95.78::618-639 PF13465::zf-H2C2_2 98.36::941-965 GO:0017053::transcriptional repressor complex confident bp_2i13_A_1::107-269 very confident psy4404 151 P08154::Early growth response protein 1 ::Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-CGCCCCCGC-3'(EGR-site). Activates the transcription of target genes whose products are required for mitogenesis and differentiation.::Rattus norvegicus (taxid: 10116) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.87::36-117 PF13465::zf-H2C2_2 98.65::84-107 GO:0030154::cell differentiation confident hh_2rpc_A_1::2-17,19-41,44-128 very confident psy7450 161 Q95LI3::Zinc finger Y-chromosomal protein ::Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.::Bos taurus (taxid: 9913) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.42::18-41 PF13465::zf-H2C2_2 98.81::64-89 GO:0031323::regulation of cellular metabolic process confident hh_2ct1_A_1::6-13,15-77 confident psy11693 579 P51523::Zinc finger protein 84 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.45::425-449 PF13465::zf-H2C2_2 98.56::416-439 GO:0031981::nuclear lumen confident hh_2i13_A_1::273-282,284-455 very confident psy11069 391 Q2QGD7::Zinc finger protein ZXDC ::Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.64::204-288 PF13465::zf-H2C2_2 98.48::345-373 GO:0031981::nuclear lumen confident hh_2i13_A_1::191-211,214-233,235-242,245-262,264-289,291-302,305-320,322-333,336-357,359-364,367-388 very confident psy11675 431 Q5JVG2::Zinc finger protein 484 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.40::283-334 PF13465::zf-H2C2_2 98.67::301-323 GO:0031981::nuclear lumen confident hh_1tf6_A_1::170-310,314-338 very confident psy18241 566 Q6P3V2::Zinc finger protein 585A ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.39::504-555 PF13465::zf-H2C2_2 98.86::521-545 GO:0031981::nuclear lumen confident hh_1tf6_A_2::361-490,492-503,507-532 very confident psy8167 167 Q8N4W9::Zinc finger protein 808 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.58::51-124 PF13465::zf-H2C2_2 98.89::118-143 GO:0031981::nuclear lumen confident hh_2csh_A_1::47-56,58-73,75-82,104-156 very confident psy11585 2227 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 95.90::573-645 PF13465::zf-H2C2_2 98.15::1991-2016 GO:0031981::nuclear lumen confident hh_1tf6_A_2::345-457,459-487,491-515 very confident psy11070 148 Q2QGD7::Zinc finger protein ZXDC ::Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.29::53-140 PF13465::zf-H2C2_2 98.82::103-125 GO:0032502::developmental process confident hh_2gli_A_1::37-90,93-113,115-125,128-144 very confident psy2875 693 A6NN14::Zinc finger protein 729 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.90::24-105 PF13465::zf-H2C2_2 98.50::71-96 GO:0034605::cellular response to heat confident hh_2i13_A_2::434-530,532-598,600-615 very confident psy3485 304 Q2EI20::RE1-silencing transcription factor ::Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells.::Danio rerio (taxid: 7955) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.02::210-268 PF13465::zf-H2C2_2 98.89::262-289 GO:0043229::intracellular organelle confident hh_2jp9_A_2::148-169,177-234,236-237,243-270 very confident psy9695 159 A6NJL1::Zinc finger and SCAN domain-containing protein 5B ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.13::103-157 PF13465::zf-H2C2_2 98.97::92-117 GO:0043234::protein complex confident hh_2rpc_A_1::13-64,68-125,127-132,139-144 very confident psy3483 99 P08048::Zinc finger Y-chromosomal protein ::Probable transcriptional activator. Binds to the consensus sequence 5'-AGGCCY-3'.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.32::5-92 PF13465::zf-H2C2_2 98.96::58-83 GO:0043234::protein complex confident hh_2dmd_A_1::2-21,23-27,34-55,57-99 very confident psy10080 101 P36197::Zinc finger E-box-binding homeobox 1 ::Acts as a transcriptional repressor. Positively regulates neuronal differentiation. Represses transcription by binding to the E box-containing promoter (By similarity). Binds to delta 1-crystallin enhancer core and represses lens-specific transcription. It binds as well many other non-lens specific DNA sequences.::Gallus gallus (taxid: 9031) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.63::40-92 PF13465::zf-H2C2_2 98.71::57-83 GO:0043234::protein complex confident hh_2rpc_A_1::28-67,69-101 confident psy13994 97 Q07120::Zinc finger protein Gfi-1 ::Transcription repressor essential for hematopoiesis. Functions in a cell-context and development-specific manner. Binds to 5'-TAAATCAC[AT]GCA-3' in the promoter region of a large number of genes. Component of several complexes, including the EHMT2-GFI1-HDAC1, AJUBA-GFI1-HDAC1 and RCOR-GFI-KDM1A-HDAC complexes, that suppress, via histone deacetylase (HDAC) recruitment, a number of genes implicated in multilineage blood cell development. Regulates neutrophil differentiation, promotes proliferation of lymphoid cells, and is required for granulocyte development. Mediates, together with U2AF1L4, the alternative splicing of CD45 and controls T-cell receptor signaling. Regulates the endotoxin-mediated Toll-like receptor (TLR) inflammatory response by antagonizing RELA. Cooperates with CBFA2T2 to regulate ITGB1-dependent neurite growth. Controls cell-cycle progression by repressing CDKNIA/p21 transcription in response to TGFB1 via recruitment of GFI1 by ZBTB17 to the CDKNIA/p21 promoter region. Implicated in the maintenance of inner ear hair cells.::Rattus norvegicus (taxid: 10116) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.73::22-94 PF13465::zf-H2C2_2 99.32::60-85 GO:0043234::protein complex confident hh_2kmk_A_1::1-35,57-97 very confident psy14799 230 Q08705::Transcriptional repressor CTCF ::Acts as both a transcriptional activator and repressor of the MYC gene.::Gallus gallus (taxid: 9031) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.60::92-143 PF13465::zf-H2C2_2 98.66::22-47 GO:0043234::protein complex confident hh_1tf6_A_1::4-8,10-61,65-115,117-142,144-149,153-154,161-164,179-201 very confident psy5652 92 Q2EI20::RE1-silencing transcription factor ::Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells.::Danio rerio (taxid: 7955) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.13::1-20 PF13465::zf-H2C2_2 99.03::50-75 GO:0043234::protein complex confident hh_2rpc_A_1::27-83,85-92 very confident psy8937 147 Q5DWN0::Zinc finger protein Gfi-1 ::Transcription repressor essential for hematopoiesis. Functions in a cell-context and development-specific manner. Binds to 5'-TAAATCAC[AT]GCA-3' in the promoter region of a large number of genes. Component of several complexes, including the EHMT2-GFI1-HDAC1, AJUBA-GFI1-HDAC1 and RCOR-GFI-KDM1A-HDAC complexes, that suppress, via histone deacetylase (HDAC) recruitment, a number of genes implicated in multilineage blood cell development. Regulates neutrophil differentiation, promotes proliferation of lymphoid cells, and is required for granulocyte development. Mediates, together with U2AF1L4, the alternative splicing of CD45 and controls T-cell receptor signaling. Regulates the endotoxin-mediated Toll-like receptor (TLR) inflammatory response by antagonizing RELA. Cooperates with CBFA2T2 to regulate ITGB1-dependent neurite growth. Controls cell-cycle progression by repressing CDKNIA/p21 transcription in response to TGFB1 via recruitment of GFI1 by ZBTB17 to the CDKNIA/p21 promoter. Required for the maintenance of inner ear hair cells.::Canis familiaris (taxid: 9615) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.91::89-140 PF13465::zf-H2C2_2 99.01::106-131 GO:0043234::protein complex confident hh_2kmk_A_1::47-71,88-144 very confident psy370 111 Q9QY31::Zinc finger protein SNAI3 ::Seems to inhibit myoblast differentiation. Transcriptional repressor of E-box-dependent transactivation of downstream myogenic bHLHs genes. Binds preferentially to the canonical E-box sequences 5'-CAGGTG-3' and 5'-CACCTG-3'.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.91::20-102 PF13465::zf-H2C2_2 98.86::65-91 GO:0043234::protein complex confident hh_2yt9_A_1::17-105 very confident psy10278 110 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.83::21-100 PF13465::zf-H2C2_2 99.05::66-91 GO:0043234::protein complex confident hh_2rpc_A_1::2-108 very confident psy9954 196 P34708::Sex-determining transformer protein 1 ::Plays a major role in controlling sexual phenotype. Terminal global regulator in a well-characterized cascade of sex-determining genes. Promotes female development. Required together with tra-2 for promoting spermatogenesis. In hermaphrodites, binds to an intronic regulatory site in the ceh-30 gene, preventing ceh-30 transcription and thereby preventing survival of the CEM (cephalic male) sensory neurons.::Caenorhabditis elegans (taxid: 6239) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.27::65-118 PF13465::zf-H2C2_2 98.67::25-50 GO:0043433::negative regulation of sequence-specific DNA binding transcription factor activity confident hh_2gli_A_1::12-125,130-153 very confident psy4421 167 Q8N8E2::Zinc finger protein 513 ::Transcriptional regulator that plays a role in retinal development and maintenance.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.47::113-164 PF13465::zf-H2C2_2 98.98::130-155 GO:0044424::intracellular part confident hh_1ubd_C_1::6-24,33-38,40-73,82-88,90-102,110-143 very confident psy7454 103 O42410::DNA-binding protein Ikaros ::Binds and activates the enhancer (delta-A element) of the CD3-delta gene. Functions in the specification and the maturation of the T-lymphocyte. Also interacts with a critical control element in the TDT (terminal deoxynucleotidyltransferase) promoter as well as with the promoters for other genes expressed during early stages of B- and T-cell development.::Gallus gallus (taxid: 9031) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.98::38-90 PF13465::zf-H2C2_2 98.97::28-50 GO:0044427::chromosomal part confident hh_2csh_A_1::5-15,17-59,61-94 very confident psy4268 86 A8MT65::Zinc finger protein 891 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.77::12-63 PF13465::zf-H2C2_2 98.97::31-54 GO:0044446::intracellular organelle part confident hh_2adr_A_1::13-42,44-68 very confident psy8793 345 P35789::Zinc finger protein 93 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.99::4-58 PF13465::zf-H2C2_2 98.87::311-335 GO:0044464::cell part confident hh_2i13_A_1::138-183,186-207,211-325 very confident psy8170 843 Q05481::Zinc finger protein 91 ::::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.38::74-145 PF13465::zf-H2C2_2 98.40::290-315 GO:0044464::cell part confident hh_2i13_A_1::3-42,45-67,69-96,117-145,147-148,150-207 very confident psy8169 843 Q05481::Zinc finger protein 91 ::::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.38::74-145 PF13465::zf-H2C2_2 98.40::290-315 GO:0044464::cell part confident hh_2i13_A_1::3-42,45-67,69-96,117-145,147-148,150-207 very confident psy12010 99 Q505G8::Zinc finger protein 827 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.97::42-95 PF13465::zf-H2C2_2 98.81::60-86 GO:0045595::regulation of cell differentiation confident hh_2kmk_A_1::18-73,75-99 very confident psy3949 103 A0JPB4::Zinc finger protein Pegasus ::DNA-binding protein that binds to the 5'GNNTGTNG-3' core sequence. Transcriptional repressor.::Xenopus tropicalis (taxid: 8364) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.36::1-18 PF13465::zf-H2C2_2 99.22::80-103 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2dmd_A_1::1-25,31-31,37-94 very confident psy6598 154 A6QQW0::Zinc finger protein 143 ::Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.::Bos taurus (taxid: 9913) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.29::31-84 PF13465::zf-H2C2_2 99.03::51-74 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2rpc_A_1::1-7,10-38,41-113 very confident psy12021 106 O15090::Zinc finger protein 536 ::May be involved in transcriptional regulation. Recognizes and binds 2 copies of the core DNA sequence 5'-CCCCCA-3'.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.87::49-103 PF13465::zf-H2C2_2 98.94::67-93 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2yt9_A_1::41-105 very confident psy517 138 O15090::Zinc finger protein 536 ::May be involved in transcriptional regulation. Recognizes and binds 2 copies of the core DNA sequence 5'-CCCCCA-3'.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.23::45-125 PF13465::zf-H2C2_2 98.74::90-116 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2ct1_A_1::62-103,105-130 very confident psy12265 71 P41696::Asparagine-rich zinc finger protein AZF1 ::Potential transcription factor; suppressor for a mitochondrial RNA polymerase mutant.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.65::17-69 PF13465::zf-H2C2_2 99.24::6-30 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2kmk_A_1::1-40,42-70 very confident psy6525 360 P51522::Zinc finger protein 83 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.40::154-180 PF13465::zf-H2C2_2 98.66::282-305 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2i13_A_1::169-349 very confident psy9958 181 Q08705::Transcriptional repressor CTCF ::Acts as both a transcriptional activator and repressor of the MYC gene.::Gallus gallus (taxid: 9031) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.35::6-67 PF13465::zf-H2C2_2 98.73::24-58 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2kmk_A_1::9-32,42-90 very confident psy4420 213 Q08705::Transcriptional repressor CTCF ::Acts as both a transcriptional activator and repressor of the MYC gene.::Gallus gallus (taxid: 9031) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.84::124-177 PF13465::zf-H2C2_2 98.57::56-79 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_1tf6_A_1::5-33,39-121,125-152,154-179 very confident psy9959 330 Q08705::Transcriptional repressor CTCF ::Acts as both a transcriptional activator and repressor of the MYC gene.::Gallus gallus (taxid: 9031) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.05::279-330 PF13465::zf-H2C2_2 98.95::297-322 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_1tf6_A_1::153-269,283-307,311-330 very confident psy16925 166 Q14588::Zinc finger protein 234 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.37::97-140 PF13465::zf-H2C2_2 98.82::106-131 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2rpc_A_1::20-88,101-141,143-151 very confident psy13406 1043 Q14591::Zinc finger protein 271 ::May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.58::54-78 PF13465::zf-H2C2_2 98.57::907-931 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2i13_A_1::110-288 very confident psy1778 66 Q2QGD7::Zinc finger protein ZXDC ::Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.19::1-57 PF13465::zf-H2C2_2 98.89::20-48 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2rpc_A_1::2-33,35-66 very confident psy8499 591 Q5R8X1::Zinc finger protein 665 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.02::455-478 PF13465::zf-H2C2_2 98.33::553-577 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2i13_A_1::416-591 very confident psy8286 858 Q6A085::Zinc finger protein 629 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.46::767-846 PF13465::zf-H2C2_2 98.13::813-836 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2rpc_A_1::740-858 very confident psy6273 82 Q8C827::Zinc finger protein 62 ::May play a role in differentiating skeletal muscle.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.77::2-82 PF13465::zf-H2C2_2 99.31::47-74 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2ct1_A_1::2-56 very confident psy12012 79 Q8K083::Zinc finger protein 536 ::May be involved in transcriptional regulation. Recognizes and binds 2 copies of the core DNA sequence 5'-CCCCCA-3'.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.00::21-73 PF13465::zf-H2C2_2 99.00::39-65 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2ct1_A_1::11-14,16-78 very confident psy2288 247 Q8K2R5::Zinc finger protein 668 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.01::146-224 PF13465::zf-H2C2_2 98.89::191-216 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_1tf6_A_1::63-201,205-230 very confident psy11589 262 Q96NG8::Zinc finger protein 582 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.63::176-255 PF13465::zf-H2C2_2 98.98::222-247 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_1tf6_A_1::92-114,116-199,201-232,236-261 very confident psy13210 155 Q9GZV8::PR domain zinc finger protein 14 ::Transcription factor that has both positive and negative roles on transcription. Required for the maintenance of emryonic stem cell identity and the reacquisition of pluripotency in somatic cells. May play an essential role in germ cell development at 2 levels: the reacquisition of potential pluripotency, including SOX2 up-regulation, and successful epigenetic reprogramming, characterized by EHMT1 repression (By similarity). Directly up-regulates the expression of pluripotency gene POU5F1 through its proximal enhancer. Binds to the DNA consensus sequence 5'-GGTC[TC]CTAA-3'.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.20::78-147 PF13465::zf-H2C2_2 99.12::113-138 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2rpc_A_1::42-65,74-147,149-155 very confident psy4572 345 Q9UJU3::Zinc finger protein 112 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.37::156-213 PF13465::zf-H2C2_2 98.23::61-85 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2i13_A_1::34-182,186-215 very confident psy12258 171 Q9UK10::Zinc finger protein 225 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.88::81-133 PF13465::zf-H2C2_2 98.80::99-123 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2i13_A_1::2-48,50-138 very confident psy12015 96 Q9Z1D9::Zinc finger protein 394 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.11::39-94 PF13465::zf-H2C2_2 98.75::35-52 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2drp_A_1::35-70,72-95 very confident psy13089 3267 no hit no match COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.10::3128-3179 PF13465::zf-H2C2_2 97.79::1479-1502 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_2rpc_A_1::3039-3078,3101-3190 very confident psy13443 188 Q13127::RE1-silencing transcription factor ::Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.79::104-155 PF13465::zf-H2C2_2 98.81::1-25 GO:0045893::positive regulation of transcription, DNA-dependent confident no hit no match psy16830 712 A6NN14::Zinc finger protein 729 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.55::596-695 PF13465::zf-H2C2_2 98.66::586-611 GO:0048523::negative regulation of cellular process confident hh_2i13_A_1::476-561,563-564,570-621,623-624,671-703 very confident psy11068 292 P98169::Zinc finger X-linked protein ZXDB ::Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.91::181-233 PF13465::zf-H2C2_2 98.65::261-287 GO:0048523::negative regulation of cellular process confident hh_1tf6_A_2::52-91,99-119,121-157,160-179,181-209,211-211,215-235,237-241 very confident psy11067 292 P98169::Zinc finger X-linked protein ZXDB ::Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.91::181-233 PF13465::zf-H2C2_2 98.65::261-287 GO:0048523::negative regulation of cellular process confident hh_1tf6_A_2::52-91,99-119,121-157,160-179,181-209,211-211,215-235,237-241 very confident psy12014 78 Q505G8::Zinc finger protein 827 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.98::15-67 PF13465::zf-H2C2_2 99.04::33-57 GO:0048523::negative regulation of cellular process confident hh_2drp_A_1::9-42,44-71 very confident psy2726 543 Q5R5U3::Zinc finger protein 271 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.38::94-193 PF13465::zf-H2C2_2 98.74::449-472 GO:0048523::negative regulation of cellular process confident hh_2i13_A_1::160-225,347-462 very confident psy7449 596 Q5R5U3::Zinc finger protein 271 ::May be involved in transcriptional regulation.::Pongo abelii (taxid: 9601) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.26::373-427 PF13465::zf-H2C2_2 98.59::543-566 GO:0048523::negative regulation of cellular process confident hh_2i13_A_2::73-192,215-215,222-284 very confident psy6673 286 Q567J8::Protein odd-skipped-related 2 ::Transcriptional repressor (By similarity). Required for pronephric kidney development.::Danio rerio (taxid: 7955) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 98.07::235-286 PF13465::zf-H2C2_2 98.68::253-278 GO:0048565::digestive tract development confident hh_2kmk_A_1::215-286 very confident psy6674 258 Q567J8::Protein odd-skipped-related 2 ::Transcriptional repressor (By similarity). Required for pronephric kidney development.::Danio rerio (taxid: 7955) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.94::208-258 PF13465::zf-H2C2_2 98.64::225-250 GO:0048565::digestive tract development confident hh_2rpc_A_1::187-258 very confident psy8696 212 Q6AY34::Protein odd-skipped-related 2 ::::Rattus norvegicus (taxid: 10116) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.79::162-212 PF13465::zf-H2C2_2 98.61::179-204 GO:0048565::digestive tract development confident hh_2rpc_A_1::136-212 very confident psy5888 447 Q03112::MDS1 and EVI1 complex locus protein EVI1 ::Functions as a transcriptional regulator binding to DNA sequences in the promoter region of target genes and regulating positively or negatively their expression. Oncogene which plays a role in development, cell proliferation and differentiation. May also play a role in apoptosis through regulation of the JNK and TGF-beta signaling. Involved in hematopoiesis.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.48::255-336 PF13465::zf-H2C2_2 98.27::245-269 GO:0048731::system development confident hh_2rpc_A_1::227-279,281-340 very confident psy11364 101 Q91ZD1::Protein odd-skipped-related 2 ::::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.92::51-101 PF13465::zf-H2C2_2 98.95::68-92 GO:0048731::system development confident hh_1yui_A_1::31-48,50-82 confident psy7447 114 Q7KQZ4::Longitudinals lacking protein, isoforms A/B/D/L ::Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.29::23-99 PF13465::zf-H2C2_2 98.86::69-94 GO:0050896::response to stimulus confident hh_2drp_A_1::20-50,52-79 very confident psy12011 94 Q9P243::Zinc finger protein ZFAT ::May be involved in transcriptional regulation. Overexpression causes down-regulation of a number of genes involved in the immune response. Some genes are also up-regulated.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.48::57-81 PF13465::zf-H2C2_2 98.77::47-71 GO:0050896::response to stimulus confident hh_2lce_A_1::26-59,61-89 very confident psy12029 81 Q7KQZ4::Longitudinals lacking protein, isoforms A/B/D/L ::Putative transcription factor required for axon growth and guidance in the central and peripheral nervous systems. Repels CNS axons away from the midline by promoting the expression of the midline repellent sli and its receptor robo.::Drosophila melanogaster (taxid: 7227) confident COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.93::21-73 PF13465::zf-H2C2_2 99.09::39-63 GO:0051253::negative regulation of RNA metabolic process confident hh_1x5w_A_1::17-51,53-81 very confident psy14694 102 Q8N8E2::Zinc finger protein 513 ::Transcriptional regulator that plays a role in retinal development and maintenance.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 97.66::62-101 PF13465::zf-H2C2_2 99.30::79-102 GO:0051253::negative regulation of RNA metabolic process confident hh_2lce_A_1::31-93 very confident psy3948 143 Q8VIG1::RE1-silencing transcription factor ::Transcriptional repressor which binds neuron-restrictive silencer element (NRSE) and represses neuronal gene transcription in non-neuronal cells. Restricts the expression of neuronal genes by associating with two distinct corepressors, mSin3 and CoREST, which in turn recruit histone deacetylase to the promoters of REST-regulated genes. Mediates repression by recruiting the BHC complex at RE1/NRSE sites which acts by deacetylating and demethylating specific sites on histones, thereby acting as a chromatin modifier.::Mus musculus (taxid: 10090) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.91::70-121 PF13465::zf-H2C2_2 98.94::87-112 GO:0051253::negative regulation of RNA metabolic process confident hh_2dmd_A_1::40-130 very confident psy9655 96 Q04545::Probable transcription factor TDA9 ::DNA-binding protein that acts probably as a transcription factor.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 96.41::60-96 PF13465::zf-H2C2_2 98.91::77-96 GO:0051716::cellular response to stimulus confident hh_2ej4_A_1::38-95 very confident psy6453 282 Q75N03::E3 ubiquitin-protein ligase Hakai ::Promotes ubiquitination of tyrosine-phosphorylated CDH1, thus targeting CDH1 for endocytosis and degradation.::Homo sapiens (taxid: 9606) portable COG5189::SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning] 91.58::148-184 PF13920::zf-C3HC4_3 97.46::97-142 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_3vk6_A_1::95-155,162-183,189-200 very confident psy11202 360 Q5ZJJ8::Ubiquitin-like domain-containing CTD phosphatase 1 ::Dephosphorylates 26S nuclear proteasomes, thereby decreasing their proteolytic activity. The dephosphorylation may prevent assembly of the core and regulatory particles (CP and RP) into mature 26S proteasome.::Gallus gallus (taxid: 9031) very confident COG5190::FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] 99.77::134-305 PF03031::NIF 99.97::139-302 GO:0005730::nucleolus very confident hh_3shq_A_1::4-242,244-317 very confident psy17690 545 Q9W4V8::Mitochondrial import inner membrane translocase subunit TIM50-C ::Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.::Drosophila melanogaster (taxid: 7227) confident COG5190::FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] 99.96::119-435 PF03031::NIF 100.00::122-279 GO:0005739::mitochondrion confident hh_2hhl_A_1::95-113,116-160,170-193,195-272 very confident psy17244 196 Q3B7T6::CTD nuclear envelope phosphatase 1 ::Serine/threonine protein phosphatase forming with CNEP1R1 an active phosphatase complex that dephosphorylates and may activate LPIN1 and LPIN2. LPIN1 and LPIN2 are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol. May antagonize BMP signaling.::Rattus norvegicus (taxid: 10116) very confident COG5190::FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] 99.94::28-196 PF03031::NIF 100.00::33-195 GO:0006998::nuclear envelope organization very confident hh_2hhl_A_1::29-50,59-119,121-196 very confident psy1552 220 Q9PTJ6::CTD small phosphatase-like protein ::Preferentially catalyzes the dephosphorylation of 'Ser-5' within the tandem 7 residues repeats in the C-terminal domain (CTD) of the largest RNA polymerase II subunit POLR2A. Negatively regulates RNA polymerase II transcription, possibly by controlling the transition from initiation/capping to processive transcript elongation. Recruited by REST to neuronal genes that contain RE-1 elements, leading to neuronal gene silencing in non-neuronal cells.::Gallus gallus (taxid: 9031) confident COG5190::FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] 99.92::59-192 PF03031::NIF 99.96::74-184 GO:0008420::CTD phosphatase activity confident hh_2hhl_A_1::55-182 very confident psy5893 1182 Q08965::Ribosome biogenesis protein BMS1 ::May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus. The depletion of BMS1 interferes with processing of the 35S pre-rRNA at sites A0, A1, and A2, and the formation of 40S subunits.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5192::BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] 100.00::316-991 PF04950::DUF663 100.00::544-833 GO:0005634::nucleus confident hh_1wb1_A_1::661-748,753-805,807-828,830-833 confident psy17858 157 Q08965::Ribosome biogenesis protein BMS1 ::May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus. The depletion of BMS1 interferes with processing of the 35S pre-rRNA at sites A0, A1, and A2, and the formation of 40S subunits.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5192::BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] 100.00::10-157 PF04950::DUF663 100.00::5-157 GO:0005634::nucleus confident hh_1wb1_A_1::29-116,121-157 portable psy5891 259 Q08965::Ribosome biogenesis protein BMS1 ::May act as a molecular switch during maturation of the 40S ribosomal subunit in the nucleolus. The depletion of BMS1 interferes with processing of the 35S pre-rRNA at sites A0, A1, and A2, and the formation of 40S subunits.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5192::BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis] 100.00::53-218 PF04950::DUF663 100.00::50-147 GO:0005634::nucleus confident hh_1wb1_A_1::54-62,67-120,122-141,143-147 confident psy9843 175 Q8BN59::La-related protein 6 ::Regulates the coordinated translation of type I collagen alpha-1 and alpha-2 mRNAs, CO1A1 and CO1A2. Stabilizes mRNAs through high-affinity binding of a stem-loop structure in their 5' UTR. This regulation requires VIM and MYH10 filaments, and the helicase DHX9.::Mus musculus (taxid: 10090) portable COG5193::LHP1 La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis] 99.57::38-161 PF05383::La 99.93::38-97 GO:0003723::RNA binding confident hh_1s29_A_1::27-116 very confident psy5142 410 P40796::La protein homolog ::May be involved in transcription termination by RNA polymerase III. Binds RNA and DNA. Binds to precursors of RNA polymerase III transcripts. May play a specialized role during fly development.::Drosophila melanogaster (taxid: 7227) confident COG5193::LHP1 La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis] 99.64::26-189 PF05383::La 99.89::26-82 GO:0005634::nucleus confident hh_2voo_A_1::11-143,148-161,167-190,194-196,220-221,225-240 very confident psy3930 299 Q7ZWE3::La-related protein 7 ::::Danio rerio (taxid: 7955) portable COG5193::LHP1 La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis] 99.54::1-170 PF05383::La 99.87::1-54 GO:0005634::nucleus confident hh_2voo_A_1::1-70,75-84,119-119,164-166,194-232,234-257,259-260,264-281 very confident psy7251 151 Q6ZQ58::La-related protein 1 ::::Mus musculus (taxid: 10090) portable COG5193::LHP1 La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis] 99.09::15-74 PF05383::La 99.92::17-74 GO:0005829::cytosol confident hh_1s29_A_1::6-92 very confident psy1630 149 Q8BWW4::La-related protein 4 ::Plays a role in the regulation of cell morphology and cytoskeletal organization.::Mus musculus (taxid: 10090) confident COG5193::LHP1 La protein, small RNA-binding pol III transcript stabilizing protein and related La-motif-containing proteins involved in translation [Posttranslational modification, protein turnover, chaperones / Translation, ribosomal structure and biogenesis] 99.56::4-133 PF05383::La 99.93::4-61 GO:0005829::cytosol confident hh_2cqk_A_1::2-80 very confident psy16471 153 O13959::RING-box protein pip1 ::Component of E3 ubiquitin ligase SCF complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Seems to recruit the E2 ubiquitination enzyme, like UBC3/CDC34, to the complex and brings it into close proximity to the substrate. Component of the rik1-associated E3 ubiquitin ligase complex that shows ubiquitin ligase activity and is required for histone H3K9 methylation. H3K9me represents a specific tag for epigenetic transcriptional repression by recruiting swi6/HP1 to methylated histones which leads to transcriptional silencing within centromeric heterochromatin, telomeric regions and at the silent mating-type loci.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5194::APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning] 100.00::25-153 PF12861::zf-Apc11 99.95::25-150 GO:0005829::cytosol confident hh_3dpl_R_1::19-69,110-153 very confident psy6139 69 Q9WTZ1::RING-box protein 2 ::Probable component of the SCF (SKP1-CUL1-F-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins involved in cell cycle progression, signal transduction and transcription. Through the RING-type zinc finger, seems to recruit the E2 ubiquitination enzyme to the complex and brings it into close proximity to the substrate. Promotes the neddylation of CUL5 via its interaction with UBE2F. May play a role in protecting cells from apoptosis induced by redox agents.::Mus musculus (taxid: 10090) confident COG5194::APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning] 99.82::1-66 PF12861::zf-Apc11 99.84::1-66 GO:0006919::activation of cysteine-type endopeptidase activity involved in apoptotic process confident hh_1gq2_A_1::30-56,58-69 very confident psy16592 132 O13959::RING-box protein pip1 ::Component of E3 ubiquitin ligase SCF complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Seems to recruit the E2 ubiquitination enzyme, like UBC3/CDC34, to the complex and brings it into close proximity to the substrate. Component of the rik1-associated E3 ubiquitin ligase complex that shows ubiquitin ligase activity and is required for histone H3K9 methylation. H3K9me represents a specific tag for epigenetic transcriptional repression by recruiting swi6/HP1 to methylated histones which leads to transcriptional silencing within centromeric heterochromatin, telomeric regions and at the silent mating-type loci.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5194::APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning] 99.97::68-131 PF12861::zf-Apc11 99.94::68-131 GO:0044428::nuclear part confident hh_3dpl_R_1::62-111,114-131 very confident psy14827 220 Q3ZCF6::Anaphase-promoting complex subunit 11 ::Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains. May recruit the E2 ubiquitin-conjugating enzymes to the complex.::Bos taurus (taxid: 9913) confident COG5194::APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning] 99.85::138-220 PF12861::zf-Apc11 99.89::139-220 GO:0090302::mitotic anaphase-promoting complex activity confident hh_3dpl_R_1::133-202,206-220 very confident psy17526 70 P38164::SEH-associated protein 4 ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5194::APC11 Component of SCF ubiquitin ligase and anaphase-promoting complex [Posttranslational modification, protein turnover, chaperones / Cell division and chromosome partitioning] 95.88::39-61 PF13639::zf-RING_2 97.57::25-61 GO:0097042::extrinsic to fungal-type vacuolar membrane confident hh_2l0b_A_1::24-61 confident psy2284 175 Q24JY4::Zinc finger HIT domain-containing protein 1 ::Seems to play a role in p53-mediated apoptosis induction.::Bos taurus (taxid: 9913) confident COG5195::Uncharacterized conserved protein [Function unknown] 97.34::102-158 PF04438::zf-HIT 99.22::134-163 GO:0040027::negative regulation of vulval development confident hh_2yqq_A_1::131-168,170-173 confident psy8340 173 no hit no match COG5195::Uncharacterized conserved protein [Function unknown] 100.00::47-172 PF08265::YL1_C 99.54::122-151 GO:0031011::Ino80 complex confident hh_2yqq_A_1::115-152 portable psy10102 86 P33946::ER lumen protein retaining receptor 1 ::Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.::Bos taurus (taxid: 9913) confident COG5196::ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] 100.00::3-86 PF00810::ER_lumen_recept 99.96::2-56 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident no hit no match psy17914 469 Q5U305::ER lumen protein retaining receptor 2 ::Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.::Rattus norvegicus (taxid: 10116) confident COG5196::ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion] 100.00::1-210 PF00810::ER_lumen_recept 100.00::1-172 GO:0005801::cis-Golgi network confident no hit no match psy15733 200 O17040::Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase hpo-8 ::Responsible for the dehydration step in very long-chain fatty acid (VLCFA) synthesis.::Caenorhabditis elegans (taxid: 6239) confident COG5198::Ptpl Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only] 100.00::18-175 PF04387::PTPLA 100.00::67-198 GO:0030176::integral to endoplasmic reticulum membrane confident no hit no match psy15727 195 Q4W1W1::Very-long-chain (3R)-3-hydroxyacyl-[acyl-carrier protein] dehydratase 1 ::Responsible for the dehydration step in very long-chain fatty acids (VLCFAs) synthesis.::Canis familiaris (taxid: 9615) confident COG5198::Ptpl Protein tyrosine phosphatase-like protein (contains Pro instead of catalytic Arg) [General function prediction only] 100.00::12-184 PF04387::PTPLA 100.00::19-182 GO:0030176::integral to endoplasmic reticulum membrane confident no hit no match psy18087 74 Q3UQ44::Ras GTPase-activating-like protein IQGAP2 ::Binds to activated CDC42 and RAC1 but does not seem to stimulate their GTPase activity. Associates with calmodulin.::Mus musculus (taxid: 10090) confident COG5199::SCP1 Calponin [Cytoskeleton] 99.44::1-68 PF00307::CH 99.04::2-68 GO:0005902::microvillus confident hh_1p5s_A_1::1-42,45-48,56-68 very confident psy17185 121 P14318::Muscle-specific protein 20 ::::Drosophila melanogaster (taxid: 7227) confident COG5199::SCP1 Calponin [Cytoskeleton] 99.93::2-112 PF00307::CH 99.58::10-96 GO:0005938::cell cortex confident hh_1wyn_A_1::1-27,30-109,111-118 very confident psy5526 88 Q9Y2L9::Leucine-rich repeat and calponin homology domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG5199::SCP1 Calponin [Cytoskeleton] 99.71::4-82 PF00307::CH 99.47::5-79 GO:0005938::cell cortex confident hh_1h67_A_1::2-36,43-81 very confident psy610 128 Q8NHY3::GAS2-like protein 2 ::Seems to be involved in the cross-linking of microtubules and microfilaments.::Homo sapiens (taxid: 9606) portable COG5199::SCP1 Calponin [Cytoskeleton] 99.83::44-117 PF00307::CH 98.54::54-104 GO:0010629::negative regulation of gene expression confident hh_1h67_A_1::3-7,9-16,30-33,44-45,50-71,73-107 very confident psy607 129 Q5SSG4::GAS2-like protein 2 ::Seems to be involved in the cross-linking of microtubules and microfilaments.::Mus musculus (taxid: 10090) confident COG5199::SCP1 Calponin [Cytoskeleton] 97.86::64-113 PF00307::CH 98.62::68-112 GO:0015629::actin cytoskeleton confident hh_3i6x_A_1::29-32,37-39,41-68,70-79,81-112 confident psy6172 130 Q45FX5::Protein vav-1 ::Acts as guanine nucleotide exchange factor (GEF) for Rho GTPase. Has a critical roles in the generation of rhythmic behaviors: feeding, defecation and ovulation by dynamically regulating the concentration of intracellular calcium.::Caenorhabditis elegans (taxid: 6239) portable COG5199::SCP1 Calponin [Cytoskeleton] 99.95::1-126 PF00307::CH 99.80::6-120 GO:0031532::actin cytoskeleton reorganization confident hh_3ky9_A_1::3-85,87-126,128-130 very confident psy6125 242 P37805::Transgelin-3 ::::Rattus norvegicus (taxid: 10116) confident COG5199::SCP1 Calponin [Cytoskeleton] 100.00::53-242 PF00307::CH 99.67::62-166 GO:0070594::juvenile hormone response element binding confident hh_1h67_A_1::60-78,84-167 very confident psy5620 72 P14318::Muscle-specific protein 20 ::::Drosophila melanogaster (taxid: 7227) confident COG5199::SCP1 Calponin [Cytoskeleton] 99.30::1-68 PF00402::Calponin 99.74::45-69 GO:0005856::cytoskeleton confident hh_2rr8_A_1::1-14,21-55 very confident psy5619 66 P19966::Transgelin ::Actin cross-linking/gelling protein.::Gallus gallus (taxid: 9031) confident COG5199::SCP1 Calponin [Cytoskeleton] 98.55::2-62 PF00402::Calponin 99.72::39-63 GO:0005856::cytoskeleton confident hh_1wyn_A_1::2-7,9-30 confident psy17184 218 P14318::Muscle-specific protein 20 ::::Drosophila melanogaster (taxid: 7227) confident COG5199::SCP1 Calponin [Cytoskeleton] 100.00::7-215 PF00402::Calponin 99.69::191-215 GO:0005938::cell cortex confident hh_1wyp_A_1::2-36,39-61,114-178 very confident psy2248 102 Q3SX41::Luc7-like protein 3 ::Binds cAMP regulatory element DNA sequence. May play a role in RNA splicing.::Bos taurus (taxid: 9913) confident COG5200::LUC7 U1 snRNP component, mediates U1 snRNP association with cap-binding complex [RNA processing and modification] 99.66::15-101 PF03194::LUC7 99.92::14-101 GO:0006915::apoptotic process confident hh_1l8d_A_1::84-95 portable psy4154 346 Q7TNC4::Putative RNA-binding protein Luc7-like 2 ::May bind to RNA via its Arg/Ser-rich domain.::Mus musculus (taxid: 10090) confident COG5200::LUC7 U1 snRNP component, mediates U1 snRNP association with cap-binding complex [RNA processing and modification] 100.00::10-256 PF03194::LUC7 100.00::10-259 GO:0045843::negative regulation of striated muscle tissue development confident rp_1vt4_I_1::98-100,103-111,113-142,145-170,172-187,194-200,204-216,227-244,246-262 portable psy10544 181 P42282::Protein tramtrack, alpha isoform ::Binds to a number of sites in the transcriptional regulatory region of ftz. Isoform alpha is required to repress genes that promote the R7 cell fate. Probable repressor of the transcription of the segmentation genes ftz, eve, h, odd, run, and en. May bind to the region 5'-AGGG[CT]GG-3'. Degradation of ttk is directed by binding of sinah or sina, via the adapter molecule phyl which binds to the BTB domain of ttk.::Drosophila melanogaster (taxid: 7227) confident COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 95.84::32-136 PF00651::BTB 99.87::21-122 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_2yy9_A_1::9-64,67-122 very confident psy5386 287 Q8IN81::Sex determination protein fruitless ::Probably acts as a transcriptional regulator. Part of the somatic sex determination hierarchy; sex determination genes transformer (tra) and transformer-2 (tra-2) switch fru splicing from the male-specific pattern to the female-specific pattern through activation of the female-specific fru 5'-splice site. Vital for the development of males and females. Controls the development of the male specific abdominal muscle of Lawrence. Plays a role in male courtship behavior and sexual orientation. Enhances male-specific expression of takeout in brain-associated fat body.::Drosophila melanogaster (taxid: 7227) portable COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 97.11::44-136 PF00651::BTB 99.83::33-138 GO:0005737::cytoplasm confident hh_3ga1_A_1::15-48,50-76,79-138 very confident psy9147 236 Q24174::Protein abrupt ::Expression is vital for development; may be involved in transcriptional regulation. In embryos, muscle specific expression is required for segmental nerve b (SNb) motoneuron target recognition within ventral longitudinal muscles. Has a role in establishing and maintaining embryonic muscle attachments, adult sensory cell formation (macrochaetae) and morphogenesis of adult appendages (legs, antenna aristae and male external genitalia). Has a role in the morphogenesis of the class I dendritic neurons: selective expression of ab in class I da neurons plays a pivotal role in forming dendritic arbors, which are characteristic of the class I cells. The development of more complex arbors of class II-IV neurons depends on the absence of ab.::Drosophila melanogaster (taxid: 7227) portable COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 96.06::32-126 PF00651::BTB 99.86::21-125 GO:0006355::regulation of transcription, DNA-dependent confident hh_2z8h_A_1::4-130 very confident psy14281 171 Q7KRI2::Longitudinals lacking protein-like ::Required, together with Trl, for maintaining the repressed state of target genes including homeotic genes Scr and Ubx. May also be involved in the activation of homeotic genes. Binds to a DNA Polycomb response element (PRE) at the bithorax complex. Also binds to polytene chromosomes at several hundred sites, many of which are shared with Trl and ph-p. Required during embryonic development.::Drosophila melanogaster (taxid: 7227) very confident COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 95.85::78-164 PF00651::BTB 99.87::66-169 GO:0007426::tracheal outgrowth, open tracheal system confident hh_3hqi_A_1::59-169 very confident psy12679 76 Q24174::Protein abrupt ::Expression is vital for development; may be involved in transcriptional regulation. In embryos, muscle specific expression is required for segmental nerve b (SNb) motoneuron target recognition within ventral longitudinal muscles. Has a role in establishing and maintaining embryonic muscle attachments, adult sensory cell formation (macrochaetae) and morphogenesis of adult appendages (legs, antenna aristae and male external genitalia). Has a role in the morphogenesis of the class I dendritic neurons: selective expression of ab in class I da neurons plays a pivotal role in forming dendritic arbors, which are characteristic of the class I cells. The development of more complex arbors of class II-IV neurons depends on the absence of ab.::Drosophila melanogaster (taxid: 7227) confident COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 95.90::13-72 PF00651::BTB 99.52::1-70 GO:0009605::response to external stimulus confident hh_3fkc_A_1::1-8,12-61 very confident psy2227 175 Q6TDP4::Kelch-like protein 17 ::Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex. The BCR(KLHL17) mediates the ubiquitination and subsequenct degradation of GLUR6. May play a role in the actin-based neuronal function.::Homo sapiens (taxid: 9606) portable COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 96.78::17-115 PF00651::BTB 99.90::5-109 GO:0016043::cellular component organization confident hh_3hqi_A_1::2-119 very confident psy11355 177 Q24206::Broad-complex core protein isoform 6 ::Broad-complex proteins are required for puffing and transcription of salivary gland late genes during metamorphosis.::Drosophila melanogaster (taxid: 7227) portable COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 95.93::71-166 PF00651::BTB 99.86::60-163 GO:0043234::protein complex confident hh_2yy9_A_1::49-103,107-167 very confident psy13247 187 Q53HC5::Kelch-like protein 26 ::::Homo sapiens (taxid: 9606) portable COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 91.35::44-124 PF00651::BTB 99.85::20-124 GO:0044428::nuclear part confident hh_3ohu_A_1::3-38,44-125 very confident psy17455 149 Q7KRI2::Longitudinals lacking protein-like ::Required, together with Trl, for maintaining the repressed state of target genes including homeotic genes Scr and Ubx. May also be involved in the activation of homeotic genes. Binds to a DNA Polycomb response element (PRE) at the bithorax complex. Also binds to polytene chromosomes at several hundred sites, many of which are shared with Trl and ph-p. Required during embryonic development.::Drosophila melanogaster (taxid: 7227) portable COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 94.45::35-130 PF00651::BTB 99.82::21-128 GO:0044428::nuclear part confident hh_2z8h_A_1::6-54,60-134 very confident psy4644 351 Q6PEC4::S-phase kinase-associated protein 1 ::Essential component of the SCF (SKP1-CUL1-F-box protein) ubiquitin ligase complex, which mediates the ubiquitination of proteins involved in cell cycle progression, signal transduction and transcription. In the SCF complex, serves as an adapter that links the F-box protein to CUL1. SCF(BTRC) mediates the ubiquitination of NFKBIA at 'Lys-21' and 'Lys-22'; the degradation frees the associated NFKB1-RELA dimer to translocate into the nucleus and to activate transcription. SCF(Cyclin F) directs ubiquitination of CP110.::Rattus norvegicus (taxid: 10116) confident COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 100.00::190-350 PF01466::Skp1 99.95::273-350 GO:0005829::cytosol confident hh_1fs1_B_2::191-224,230-335 very confident psy17891 163 Q15369::Transcription elongation factor B polypeptide 1 ::The elongin BC complex seems to be involved as an adapter protein in the proteasomal degradation of target proteins via different E3 ubiquitin ligase complexes, including the von Hippel-Lindau ubiquitination complex CBC(VHL). By binding to BC-box motifs it seems to link target recruitment subunits, like VHL and members of the SOCS box family, to Cullin/RBX1 modules that activate E2 ubiquitination enzymes.::Homo sapiens (taxid: 9606) very confident COG5201::SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] 99.75::68-162 PF03931::Skp1_POZ 99.84::68-133 GO:0030891::VCB complex very confident hh_1vcb_B_1::56-163 very confident psy217 353 Q9VVX5::Transmembrane protein nessy ::::Drosophila melanogaster (taxid: 7227) confident COG5202::Predicted membrane protein [Function unknown] 100.00::2-340 PF03062::MBOAT 100.00::1-263 GO:0005783::endoplasmic reticulum confident no hit no match psy8226 115 Q9TVQ5::Transcription elongation factor SPT4 ::Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II. DSIF enhances transcriptional pausing at sites proximal to the promoter, which may facilitate the assembly of an elongation competent RNA polymerase II complex. DSIF may also promote transcriptional elongation within coding regions. DSIF is required for the transcriptional induction of heat shock response genes and regulation of genes which control anterior-posterior patterning during embryonic development.::Drosophila melanogaster (taxid: 7227) confident COG5204::SPT4 Transcription elongation factor SPT4 [Transcription] 99.94::45-114 PF06093::Spt4 99.98::48-114 GO:0006351::transcription, DNA-dependent confident hh_3h7h_A_1::40-114 very confident psy8227 125 Q9TVQ5::Transcription elongation factor SPT4 ::Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II. DSIF enhances transcriptional pausing at sites proximal to the promoter, which may facilitate the assembly of an elongation competent RNA polymerase II complex. DSIF may also promote transcriptional elongation within coding regions. DSIF is required for the transcriptional induction of heat shock response genes and regulation of genes which control anterior-posterior patterning during embryonic development.::Drosophila melanogaster (taxid: 7227) confident COG5204::SPT4 Transcription elongation factor SPT4 [Transcription] 99.58::81-125 PF06093::Spt4 99.77::80-125 GO:0032044::DSIF complex confident hh_3h7h_A_1::68-125 very confident psy17622 194 Q9CXY9::GPI-anchor transamidase ::Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.::Mus musculus (taxid: 10090) confident COG5206::GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] 100.00::27-179 PF01650::Peptidase_C13 100.00::31-178 GO:0042765::GPI-anchor transamidase complex confident hh_4f6o_A_1::28-72,74-77,82-83,109-166 portable psy6307 368 Q9USP5::GPI-anchor transamidase ::Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5206::GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] 100.00::16-355 PF01650::Peptidase_C13 100.00::25-336 GO:0042765::GPI-anchor transamidase complex confident hh_4f6o_A_1::21-69,75-76,86-86,103-120,130-147,150-157,193-220,223-266,271-289,293-309 confident psy9878 338 Q53GS9::U4/U6.U5 tri-snRNP-associated protein 2 ::May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs).::Homo sapiens (taxid: 9606) confident COG5207::UBP14 Isopeptidase T [Posttranslational modification, protein turnover, chaperones] 100.00::7-307 PF00443::UCH 99.84::181-318 GO:0071011::precatalytic spliceosome confident hh_2gfo_A_1::153-245,248-263,265-319 very confident psy4260 129 P32628::UV excision repair protein RAD23 ::Plays a central role both in proteasomal degradation of misfolded proteins and DNA repair. Central component of a complex required to couple deglycosylation and proteasome-mediated degradation of misfolded proteins in the endoplasmic reticulun that are retrotranslocated in the cytosol. Involved in DNA excision repair. May play a part in DNA damage recognition and/or in altering chromatin structure to allow access by damage-processing enzymes.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5207::UBP14 Isopeptidase T [Posttranslational modification, protein turnover, chaperones] 97.66::42-82 PF00627::UBA 99.47::41-76 GO:0043130::ubiquitin binding confident hh_1oqy_A_1::31-122 very confident psy14516 76 Q9UBN7::Histone deacetylase 6 ::In addition to its protein deacetylase activity, plays a key role in the degradation of misfolded proteins: when misfolded proteins are too abundant to be degraded by the chaperone refolding system and the ubiquitin-proteasome, mediates the transport of misfolded proteins to a cytoplasmic juxtanuclear structure called aggresome. Probably acts as an adapter that recognizes polyubiquitinated misfolded proteins and target them to the aggresome, facilitating their clearance by autophagy.::Homo sapiens (taxid: 9606) confident COG5207::UBP14 Isopeptidase T [Posttranslational modification, protein turnover, chaperones] 98.98::13-76 PF02148::zf-UBP 99.16::45-76 GO:0042826::histone deacetylase binding confident hh_3c5k_A_1::20-76 very confident psy14772 191 Q9FMV5::Nuclear transcription factor Y subunit C-4 ::Stimulates the transcription of various genes by recognizing and binding to a CCAAT motif in promoters (By similarity). Involved in the abscisic acid (ABA) signaling pathway.::Arabidopsis thaliana (taxid: 3702) confident COG5208::HAP5 CCAAT-binding factor, subunit C [Transcription] 99.92::5-104 PF00808::CBFD_NFYB_HMF 99.82::24-87 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_4g92_C_1::4-102 very confident psy8417 326 Q92600::Cell differentiation protein RCD1 homolog ::Transcription factor that down-regulates MYB- and JUN-dependent transcription. May play a role in cell differentiation (By similarity). Can bind oligonucleotides, such as poly-G, poly-C or poly-T (in vitro), but the physiological relevance of this is not certain. Does not bind poly-A.::Homo sapiens (taxid: 9606) very confident COG5209::RCD1 Uncharacterized protein involved in cell differentiation/sexual development [General function prediction only] 100.00::46-310 PF04078::Rcd1 100.00::49-310 GO:0033147::negative regulation of intracellular estrogen receptor signaling pathway very confident hh_2fv2_A_1::43-309 very confident psy4050 472 Q8R3D1::TBC1 domain family member 13 ::May act as a GTPase-activating protein for Rab family protein(s).::Mus musculus (taxid: 10090) confident COG5210::GTPase-activating protein [General function prediction only] 99.95::157-347 PF00566::RabGAP-TBC 99.94::158-340 GO:0001514::selenocysteine incorporation confident hh_2qfz_A_1::158-169,171-175,178-248,253-373 very confident psy3426 360 Q5F361::TBC domain-containing protein kinase-like protein ::::Gallus gallus (taxid: 9031) portable COG5210::GTPase-activating protein [General function prediction only] 99.97::2-181 PF00566::RabGAP-TBC 99.98::2-171 GO:0004672::protein kinase activity confident hh_2qq8_A_1::2-39,42-59,62-204 very confident psy15984 68 Q80U12::Small G protein signaling modulator 2 ::::Mus musculus (taxid: 10090) confident COG5210::GTPase-activating protein [General function prediction only] 99.70::5-66 PF00566::RabGAP-TBC 99.50::5-65 GO:0005097::Rab GTPase activator activity confident hh_2qq8_A_1::5-32,34-65 very confident psy7828 503 Q8N5T2::TBC1 domain family member 19 ::May act as a GTPase-activating protein for Rab family protein(s).::Homo sapiens (taxid: 9606) confident COG5210::GTPase-activating protein [General function prediction only] 99.97::223-491 PF00566::RabGAP-TBC 99.96::236-475 GO:0005097::Rab GTPase activator activity confident hh_3hzj_A_1::222-266,271-308,340-344,347-362,364-388,390-452,454-477,479-492 very confident psy17384 295 Q5CD77::TBC1 domain family member 14 ::May act as a GTPase-activating protein for Rab family protein(s).::Rattus norvegicus (taxid: 10116) confident COG5210::GTPase-activating protein [General function prediction only] 99.97::5-173 PF00566::RabGAP-TBC 99.97::4-173 GO:0005776::autophagic vacuole confident hh_2qq8_A_1::4-66,68-198 very confident psy8434 114 Q9D9I4::TBC1 domain family member 20 ::May act as a GTPase-activating protein for Rab family protein(s).::Mus musculus (taxid: 10090) confident COG5210::GTPase-activating protein [General function prediction only] 99.94::2-114 PF00566::RabGAP-TBC 99.92::2-114 GO:0005783::endoplasmic reticulum confident hh_4hl4_A_1::2-114 very confident psy3959 431 Q9NU19::TBC1 domain family member 22B ::May act as a GTPase-activating protein for Rab family protein(s).::Homo sapiens (taxid: 9606) confident COG5210::GTPase-activating protein [General function prediction only] 100.00::105-390 PF00566::RabGAP-TBC 100.00::132-378 GO:0005794::Golgi apparatus confident hh_2qfz_A_1::94-197,199-247,249-425 very confident psy3328 337 Q5TC63::Growth hormone-regulated TBC protein 1 ::May act as a GTPase-activating protein for Rab family protein(s).::Homo sapiens (taxid: 9606) confident COG5210::GTPase-activating protein [General function prediction only] 100.00::3-249 PF00566::RabGAP-TBC 100.00::18-232 GO:0005829::cytosol confident hh_3qye_A_1::3-37,39-57,61-122,124-268 very confident psy11360 940 Q2KI13::Small G protein signaling modulator 3 ::May play a cooperative role in NF2-mediated growth suppression of cells.::Bos taurus (taxid: 9913) confident COG5210::GTPase-activating protein [General function prediction only] 99.95::130-372 PF00566::RabGAP-TBC 99.88::146-353 GO:0005921::gap junction confident hh_3qye_A_1::94-107,125-179,184-234,258-374,376-376,398-410,413-414,416-428 very confident psy17322 414 O43048::TBC domain-containing protein C215.01 ::May act as a GTPase-activating protein for Rab family protein(s).::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5210::GTPase-activating protein [General function prediction only] 100.00::201-414 PF00566::RabGAP-TBC 99.96::237-413 GO:0031323::regulation of cellular metabolic process confident hh_3qye_A_1::201-264,268-271,276-277,280-413 very confident psy4079 294 Q2KI13::Small G protein signaling modulator 3 ::May play a cooperative role in NF2-mediated growth suppression of cells.::Bos taurus (taxid: 9913) confident COG5210::GTPase-activating protein [General function prediction only] 100.00::62-270 PF00566::RabGAP-TBC 99.97::67-258 GO:0032483::regulation of Rab protein signal transduction confident hh_3qye_A_1::62-110,115-272 very confident psy16313 1018 A1A5B6::TBC1 domain family member 25 ::May act as a GTPase-activating protein for Rab family protein(s).::Mus musculus (taxid: 10090) portable COG5210::GTPase-activating protein [General function prediction only] 100.00::319-581 PF00566::RabGAP-TBC 99.96::410-561 GO:0032851::positive regulation of Rab GTPase activity confident hh_3qye_A_1::320-347,349-376,380-394,404-406,411-431,433-472,474-580 very confident psy18019 827 Q9Y7J5::TBC domain-containing protein C1778.09 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5210::GTPase-activating protein [General function prediction only] 100.00::353-621 PF00566::RabGAP-TBC 100.00::385-610 GO:0032851::positive regulation of Rab GTPase activity confident hh_3qye_A_1::354-407,417-430,434-513,516-640 very confident psy14842 858 Q3UUG6::TBC1 domain family member 24 ::May act as a GTPase-activating protein for Rab family protein(s). Involved in neuronal projections development, probably through a negative modulation of ARF6 function.::Mus musculus (taxid: 10090) portable COG5210::GTPase-activating protein [General function prediction only] 99.94::364-575 PF00566::RabGAP-TBC 99.94::416-573 GO:0043195::terminal bouton confident hh_3qye_A_1::367-376,380-517,520-576,584-616,618-618,620-631,633-636 very confident psy9210 234 Q4KLK9::RNA polymerase II subunit A C-terminal domain phosphatase SSU72 ::May be involved in the C-terminal domain of RNA polymerase II dephosphorylation, RNA processing and termination.::Rattus norvegicus (taxid: 10116) very confident COG5211::SSU72 RNA polymerase II-interacting protein involved in transcription start site selection [Transcription] 100.00::3-234 PF04722::Ssu72 100.00::4-234 GO:0008420::CTD phosphatase activity confident hh_3p9y_A_1::2-41,81-96,98-164,166-234 very confident psy8798 114 Q09801::Pre-mRNA polyadenylation factor fip1 ::Pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5213::FIP1 Polyadenylation factor I complex, subunit FIP1 [RNA processing and modification] 99.93::60-113 PF05182::Fip1 99.96::74-114 GO:0005634::nucleus confident no hit no match psy149 86 P33611::DNA polymerase alpha subunit B ::May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery.::Mus musculus (taxid: 10090) portable COG5214::POL12 DNA polymerase alpha-primase complex, polymerase-associated subunit B [DNA replication, recombination, and repair] 99.85::2-82 PF04042::DNA_pol_E_B 99.59::10-82 GO:0031981::nuclear lumen confident hh_3flo_A_1::3-82 very confident psy151 110 Q14181::DNA polymerase alpha subunit B ::May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery.::Homo sapiens (taxid: 9606) confident COG5214::POL12 DNA polymerase alpha-primase complex, polymerase-associated subunit B [DNA replication, recombination, and repair] 99.96::3-110 PF04042::DNA_pol_E_B 99.88::14-108 GO:0031981::nuclear lumen confident hh_3flo_A_1::5-40,43-110 very confident psy145 203 P33611::DNA polymerase alpha subunit B ::May play an essential role at the early stage of chromosomal DNA replication by coupling the polymerase alpha/primase complex to the cellular replication machinery.::Mus musculus (taxid: 10090) portable COG5214::POL12 DNA polymerase alpha-primase complex, polymerase-associated subunit B [DNA replication, recombination, and repair] 100.00::25-190 PF08418::Pol_alpha_B_N 96.96::25-58 GO:0031981::nuclear lumen confident hh_3flo_A_1::28-190 very confident psy9904 592 O14089::Importin subunit beta-2 ::Required for import of mRNA binding proteins. Binds to nucleoporins.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5215::KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] 100.00::73-569 PF01602::Adaptin_N 99.52::74-562 GO:0005829::cytosol confident hh_4fdd_A_1::68-189,208-232,234-592 very confident psy14676 1827 Q8L5Y6::Cullin-associated NEDD8-dissociated protein 1 ::Required for SCF(TIR1) function. Modulates SCF(TIR1) function through its interactions with the CUL1 subunit. Positively regulates multiple E3 ubiquitin-protein ligase complexes and their associated developmental processes. Represses photomorphogenesis by promoting HY5 degradation in darkness.::Arabidopsis thaliana (taxid: 3702) portable COG5215::KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] 99.91::8-496 PF08623::TIP120 100.00::1585-1756 GO:0045899::positive regulation of RNA polymerase II transcriptional preinitiation complex assembly confident hh_1u6g_C_1::3-224,231-239,241-325,327-399,434-434,436-500,885-939,1002-1006,1041-1045,1048-1072,1083-1118,1125-1143,1146-1207,1211-1252,1258-1280,1301-1380,1386-1469,1494-1509,1556-1576,1585-1596,1605-1774,1778-1784 very confident psy12576 165 P52296::Importin subunit beta-1 ::Functions in nuclear protein import, either in association with an adapter protein, like an importin-alpha subunit, which binds to nuclear localization signals (NLS) in cargo substrates, or by acting as autonomous nuclear transport receptor. Acting autonomously, serves itself as NLS receptor. Docking of the importin/substrate complex to the nuclear pore complex (NPC) is mediated by KPNB1 through binding to nucleoporin FxFG repeats and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin-beta and the three components separate and importin-alpha and -beta are re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran from importin. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Mediates autonomously the nuclear import of ribosomal proteins RPL23A, RPS7 and RPL5. Binds to a beta-like import receptor binding (BIB) domain of RPL23A. In association with IPO7 mediates the nuclear import of H1 histone. In vitro, mediates nuclear import of H2A, H2B, H3 and H4 histones. In case of HIV-1 infection, binds and mediates the nuclear import of HIV-1 Rev. Imports PRKCI into the nucleus.::Rattus norvegicus (taxid: 10116) confident COG5215::KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] 100.00::1-165 PF12755::Vac14_Fab1_bd 99.10::76-162 GO:0031965::nuclear membrane confident hh_1ibr_B_1::3-165 very confident psy15255 199 O00410::Importin-5 ::Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus (By similarity). Mediates the nuclear import of ribosomal proteins RPL23A, RPS7 and RPL5. Binds to a beta-like import receptor binding (BIB) domain of RPL23A. In vitro, mediates nuclear import of H2A, H2B, H3 and H4 histones. In case of HIV-1 infection, binds and mediates the nuclear import of HIV-1 Rev.::Homo sapiens (taxid: 9606) portable COG5215::KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] 99.71::2-199 PF12755::Vac14_Fab1_bd 99.05::109-197 GO:0043229::intracellular organelle confident hh_1qgr_A_2::8-26,39-63,68-101,103-108,110-125,129-198 confident psy7115 132 Q0VBY7::DnaJ homolog subfamily C member 24 ::Stimulates the ATPase activity of several Hsp70-type chaperones.::Bos taurus (taxid: 9913) confident COG5216::Uncharacterized conserved protein [Function unknown] 99.66::34-97 PF05207::zf-CSL 99.84::37-95 GO:0044424::intracellular part confident hh_2l6l_A_1::1-73,79-95 very confident psy12281 456 Q8BFT6::JmjC domain-containing protein 4 ::::Mus musculus (taxid: 10090) confident COG5216::Uncharacterized conserved protein [Function unknown] 99.78::4-61 PF13621::Cupin_8 100.00::97-337 GO:0005829::cytosol confident hh_3k2o_A_1::74-127,134-152,158-177,184-217,219-224,227-349 very confident psy12631 185 Q15691::Microtubule-associated protein RP/EB family member 1 ::Binds to the plus end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes cytoplasmic microtubule nucleation and elongation. May be involved in spindle function by stabilizing microtubules and anchoring them at centrosomes. May play a role in cell migration.::Homo sapiens (taxid: 9606) confident COG5217::BIM1 Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton] 99.96::13-157 PF00307::CH 99.28::17-137 GO:0005881::cytoplasmic microtubule confident hh_1wyo_A_1::1-79,105-140,142-144,146-160 very confident psy12626 205 Q15691::Microtubule-associated protein RP/EB family member 1 ::Binds to the plus end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes cytoplasmic microtubule nucleation and elongation. May be involved in spindle function by stabilizing microtubules and anchoring them at centrosomes. May play a role in cell migration.::Homo sapiens (taxid: 9606) confident COG5217::BIM1 Microtubule-binding protein involved in cell cycle control [Cell division and chromosome partitioning / Cytoskeleton] 100.00::1-197 PF03271::EB1 99.81::155-193 GO:0051010::microtubule plus-end binding confident hh_2r8u_A_1::1-90,92-112,118-124,126-197 very confident psy17995 120 P51948::CDK-activating kinase assembly factor MAT1 ::Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Involved in cell cycle control and in RNA transcription by RNA polymerase II.::Homo sapiens (taxid: 9606) confident COG5220::TFB3 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit TFB3 [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] 100.00::1-119 PF06391::MAT1 99.89::53-120 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_1g25_A_1::1-65 very confident psy8748 2004 no hit no match COG5221::DOP1 Dopey and related predicted leucine zipper transcription factors [Transcription] 99.95::874-1456 PF02239::Cytochrom_D1 99.44::1685-1991 GO:0044428::nuclear part confident no hit no match psy12393 155 Q8N2G6::Zinc finger CCHC domain-containing protein 24 ::::Homo sapiens (taxid: 9606) confident COG5222::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 98.48::13-52 PF13695::zf-3CxxC 99.58::72-139 GO:0014013::regulation of gliogenesis confident hh_2ysa_A_1::18-46 confident psy9319 432 Q10106::Probable U3 small nucleolar RNA-associated protein 11 ::Involved in nucleolar processing of pre-18S ribosomal RNA.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5223::Uncharacterized conserved protein [Function unknown] 100.00::198-432 PF03998::Utp11 100.00::197-432 GO:0005875::microtubule associated complex confident no hit no match psy2824 242 Q08746::Regulator of ribosome biosynthesis ::Required for ribosome biogenesis.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5225::RRS1 Uncharacterized protein involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis] 100.00::22-194 PF04939::RRS1 100.00::29-192 GO:0005730::nucleolus confident rp_1vt4_I_1::8-21,26-80,86-145,147-147,154-178,182-205,207-221 portable psy9353 543 O55236::mRNA-capping enzyme ::Bifunctional mRNA-capping enzyme exhibiting RNA 5'-triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.::Mus musculus (taxid: 10090) confident COG5226::CEG1 mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] 100.00::232-542 PF01331::mRNA_cap_enzyme 100.00::266-453 GO:0005654::nucleoplasm confident hh_3rtx_A_1::223-438,440-487,490-542 very confident psy7993 300 Q6PGH0::Ubiquitin domain-containing protein 2 ::::Mus musculus (taxid: 10090) confident COG5227::SMT3 Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones] 93.06::207-279 PF00240::ubiquitin 99.64::211-280 GO:0005737::cytoplasm confident hh_2ksn_A_1::21-136 very confident psy1973 252 P21126::Ubiquitin-like protein 4A ::Component of the BAT3 complex, a multiprotein complex involved in the post-translational delivery of tail-anchored (TA) membrane proteins to the endoplasmic reticulum membrane. TA membrane proteins, also named type II transmembrane proteins, contain a single C-terminal transmembrane region. The complex acts by facilitating TA proteins capture by ASNA1/TRC40: it is recruited to ribosomes synthesizing membrane proteins, interacts with the transmembrane region of newly released TA proteins, and transfers them to ASNA1/TRC40 for targeting.::Mus musculus (taxid: 10090) portable COG5227::SMT3 Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones] 96.96::2-71 PF00240::ubiquitin 99.65::6-74 GO:0043234::protein complex confident hh_3b08_A_1::1-59,61-74,93-103,109-112,115-161,163-176 very confident psy2142 168 P62864::40S ribosomal protein S30 ::::Rattus norvegicus (taxid: 10116) portable COG5227::SMT3 Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones] 93.80::50-122 PF04758::Ribosomal_S30 99.69::118-168 GO:0022627::cytosolic small ribosomal subunit confident hh_3iz6_Z_1::120-168 very confident psy4523 126 Q6DI05::Small ubiquitin-related modifier 3 ::Ubiquitin-like protein which can be covalently attached to target lysines either as a monomer or as a lysine-linked polymer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex sae1-sae2 and linkage to the E2 enzyme ube2i.::Danio rerio (taxid: 7955) confident COG5227::SMT3 Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones] 99.94::10-103 PF11976::Rad60-SLD 99.86::15-96 GO:0030496::midbody very confident hh_2io1_B_1::10-47,59-105 very confident psy16998 98 P55853::Small ubiquitin-related modifier ::Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process. Plays a role in a number of cellular processes such as nuclear transport, DNA replication and repair, mitosis and signal transduction. Covalent attachment to its substrates requires prior activation by the E1 complex aos-1-uba-2 and linkage to the E2 enzyme ubc-9, and can be promoted by an E3 ligase such as gei-17. Required for embryonic development, fertility, vulval morphogenesis and inhibition of vulval cell fates.::Caenorhabditis elegans (taxid: 6239) confident COG5227::SMT3 Ubiquitin-like protein (sentrin) [Posttranslational modification, protein turnover, chaperones] 99.96::8-97 PF11976::Rad60-SLD 99.78::30-97 GO:0043234::protein complex confident hh_2uyz_B_1::28-67,69-97 very confident psy6931 81 Q8VDG3::Poly(A)-specific ribonuclease PARN ::3'-exoribonuclease that has a preference for poly(A) tails of mRNAs, thereby efficiently degrading poly(A) tails. Exonucleolytic degradation of the poly(A) tail is often the first step in the decay of eukaryotic mRNAs and is also used to silence certain maternal mRNAs translationally during oocyte maturation and early embryonic development. Interacts with both the 3'-end poly(A) tail and the 5'-end cap structure during degradation, the interaction with the cap structure being required for an efficient degradation of poly(A) tails. Involved in nonsense-mediated mRNA decay, a critical process of selective degradation of mRNAs that contain premature stop codons. Also involved in degradation of inherently unstable mRNAs that contain AU-rich elements (AREs) in their 3'-UTR, possibly via its interaction with KHSRP. Probably mediates the removal of poly(A) tails of AREs mRNAs, which constitutes the first step of destabilization.::Mus musculus (taxid: 10090) confident COG5228::POP2 mRNA deadenylase subunit [RNA processing and modification] 99.40::8-73 PF04857::CAF1 99.90::5-73 GO:0000289::nuclear-transcribed mRNA poly(A) tail shortening confident hh_3d45_A_1::4-80 very confident psy6037 286 Q08BM8::CCR4-NOT transcription complex subunit 7 ::Ubiquitous transcription factor required for a diverse set of processes. It is a component of the CCR4 complex involved in the control of gene expression.::Danio rerio (taxid: 7955) very confident COG5228::POP2 mRNA deadenylase subunit [RNA processing and modification] 100.00::4-281 PF04857::CAF1 100.00::15-244 GO:0043928::exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay very confident hh_2d5r_A_1::13-93,95-175,177-266 very confident psy4828 448 Q8BVE3::V-type proton ATPase subunit H ::Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates the ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Involved in the endocytosis mediated by clathrin-coated pits, required for the formation of endosomes.::Mus musculus (taxid: 10090) very confident COG5231::VMA13 Vacuolar H+-ATPase V1 sector, subunit H [Energy production and conversion] 100.00::24-448 PF03224::V-ATPase_H_N 100.00::30-326 GO:0002119::nematode larval development confident hh_1ho8_A_1::23-81,83-126,131-166,169-284,287-448 very confident psy18011 163 Q99JX3::Golgi reassembly-stacking protein 2 ::Plays a role in assembly and membrane stacking of the Golgi cisternae, and in the process by which Golgi stacks reform after mitotic breakdown. May regulate the intracellular transport and presentation of a defined set of transmembrane proteins, such as transmembrane TGFA.::Mus musculus (taxid: 10090) portable COG5233::GRH1 Peripheral Golgi membrane protein [Intracellular trafficking and secretion] 98.96::1-158 PF04495::GRASP55_65 99.78::48-157 GO:0007030::Golgi organization confident hh_3rle_A_1::1-14,16-159 very confident psy14303 161 Q28205::Tubulin-specific chaperone D ::Tubulin-folding protein; involved in the first step of the tubulin folding pathway. Modulates microtubule dynamics by capturing GTP-bound beta-tubulin (TUBB). Acts as a GTPase-activating protein (GAP) for ARL2. Its ability to interact with beta tubulin is regulated via its interaction with ARL2. Induces microtubule disruption in absence of ARL2. Increases degradation of beta tubulin, when overexpressed in polarized cells. Promotes epithelial cell detachment, a process antagonized by ARL2. Induces tight adherens and tight junctions disassembly at the lateral cell membrane.::Bos taurus (taxid: 9913) confident COG5234::CIN1 Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones / Cytoskeleton] 99.94::1-149 no hit no match GO:0005923::tight junction confident hh_1ibr_B_1::16-51,53-77,79-79,83-85,95-95,100-102,116-126,128-159 portable psy2747 557 O62640::Putative inhibitor of apoptosis ::::Sus scrofa (taxid: 9823) confident COG5236::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 96.36::505-552 PF00653::BIR 99.85::7-72 GO:0043234::protein complex confident hh_3t6p_A_1::223-324,327-335,339-353,355-371,377-382,384-385,388-408,410-425,434-557 very confident psy2838 458 Q07230::Zinc finger and SCAN domain-containing protein 2 ::May be involved in transcriptional regulation during the post-meiotic stages of spermatogenesis.::Mus musculus (taxid: 10090) portable COG5236::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 97.31::293-374 PF01352::KRAB 99.12::43-78 GO:0005737::cytoplasm confident hh_2i13_A_1::194-377 very confident psy4409 305 P18729::Gastrula zinc finger protein XlCGF57.1 (Fragment) ::May be involved in transcriptional regulation.::Xenopus laevis (taxid: 8355) portable COG5236::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 97.72::87-230 PF13465::zf-H2C2_2 98.71::190-215 GO:0005730::nucleolus confident hh_2i13_A_1::1-39,69-70,76-129,139-147,149-167,174-232 very confident psy4575 400 Q6ZMW2::Zinc finger protein 782 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5236::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 97.55::121-271 PF13465::zf-H2C2_2 98.72::355-378 GO:0005730::nucleolus confident hh_2i13_A_1::218-264,276-396 very confident psy11318 263 P08042::Zinc finger protein 1 ::May be involved in transcriptional regulation.::Mus musculus (taxid: 10090) portable COG5236::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 97.57::29-168 PF13465::zf-H2C2_2 98.55::159-181 GO:0005737::cytoplasm confident hh_2i13_A_2::1-120,123-172 very confident psy4576 400 Q6ZMW2::Zinc finger protein 782 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable COG5236::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 97.55::121-271 PF13465::zf-H2C2_2 98.72::355-378 GO:0005737::cytoplasm confident hh_2i13_A_1::218-264,276-396 very confident psy12560 440 no hit no match COG5236::Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only] 97.63::203-301 PF13465::zf-H2C2_2 98.61::263-287 GO:0005737::cytoplasm confident hh_2i13_A_1::123-163,165-304 very confident psy18075 999 P11745::Ran GTPase-activating protein 1 ::GTPase activator for the nuclear Ras-related regulatory protein GSP1 (Ran), converting it to the putatively inactive GDP-bound state.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5238::RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] 99.95::377-690 PF07834::RanGAP1_C 100.00::775-924 GO:0005737::cytoplasm confident hh_2grr_B_1::775-800,802-810,814-839,843-864,867-884,886-938 very confident psy9585 189 Q8BH16::F-box/LRR-repeat protein 2 ::Probably recognizes and binds to some phosphorylated proteins and promotes their ubiquitination and degradation.::Mus musculus (taxid: 10090) confident COG5238::RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] 96.81::114-188 PF12937::F-box-like 99.32::27-72 GO:0006508::proteolysis confident hh_3ogk_B_2::82-93,95-129,131-156,158-182,184-188 very confident psy5339 479 A1A5X2::F-box/LRR-repeat protein 7 ::Substrate recognition component of a (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Danio rerio (taxid: 7955) confident COG5238::RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] 98.86::210-454 PF14580::LRR_9 98.60::15-126 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2p1m_B_2::13-29,31-75,77-130,133-178,181-205,207-230,232-244,261-296,298-348,351-376,378-427,429-453 very confident psy9589 163 C8V4D4::SCF E3 ubiquitin ligase complex F-box protein grrA ::Involved in meiosis and required for ascospore formation. Involved in substrate recognition in ubiquitin-dependent degradation.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG5238::RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] 98.88::7-156 PF14580::LRR_9 98.87::15-163 GO:0016567::protein ubiquitination confident hh_2p1m_B_1::11-25,28-114,117-141,143-161 very confident psy17257 778 Q9W0E8::Protein zer-1 homolog ::Probably acts as target recruitment subunit in an E3 ubiquitin ligase complex CG12084-cul-2-elongin BC.::Drosophila melanogaster (taxid: 7227) confident COG5238::RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] 98.05::86-330 PF14580::LRR_9 98.78::197-318 GO:0031462::Cul2-RING ubiquitin ligase complex confident hh_2ast_B_1::51-69,71-83,86-119,121-148,151-154,193-211,213-238,240-241,243-250,252-293,303-304,306-322 very confident psy3611 472 P46060::Ran GTPase-activating protein 1 ::GTPase activator for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state.::Homo sapiens (taxid: 9606) confident COG5238::RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] 99.78::221-448 PF14580::LRR_9 98.96::293-438 GO:0043229::intracellular organelle confident hh_1z7x_W_2::2-163,170-170,212-251,253-282,293-466 very confident psy12253 149 O35710::Nocturnin ::Component of the circadian clock or downstream effector of clock function. Exhibits a high amplitude circadian rhythm with maximal levels in early evening. In constant darkness or constant light, the amplitude of the rhythm decreases.::Mus musculus (taxid: 10090) portable COG5239::CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification] 99.74::11-148 PF03372::Exo_endo_phos 95.27::26-40 GO:0043229::intracellular organelle confident hh_3ngq_A_1::5-75,81-89,94-148 very confident psy6945 61 Q9ULM6::CCR4-NOT transcription complex subunit 6 ::Poly(A) nuclease involved in mRNA decay mediated by the major-protein-coding determinant of instability (mCRD) of the FOS gene in the cytoplasm. Has 3'-5' RNase activity. The CCR4-NOT complex functions as general transcription regulation complex.::Homo sapiens (taxid: 9606) confident COG5239::CCR4 mRNA deadenylase, exonuclease subunit and related nucleases [RNA processing and modification] 97.47::1-59 no hit no match GO:0030014::CCR4-NOT complex confident hh_3ngq_A_1::1-60 very confident psy8503 421 Q8I0G5::Coatomer subunit gamma ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Required for limiting lipid storage in lipid droplets. Involved in the expansion of luminal extracellular matrices and apical membrane during tubulogenesis. Required in the tracheal epithelium for luminal protein secretion and diametric tube growth. In salivary glands, required for deposition of O-glycans and luminal extracellular matrix assembly. Required for epidermal morphogenesis and cuticle development.::Drosophila melanogaster (taxid: 7227) confident COG5240::SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] 100.00::1-416 PF01602::Adaptin_N 99.80::3-224 GO:0005634::nucleus confident hh_1pzd_A_1::241-273,277-287,289-289,291-310,312-319,321-388,392-420 very confident psy18014 323 Q9Y678::Coatomer subunit gamma-1 ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. Required for limiting lipid storage in lipid droplets. Involved in lipid homeostasis by regulating the presence of perilipin family members PLIN2 and PLIN3 at the lipid droplet surface and promoting the association of adipocyte triglyceride lipase (PNPLA2) with the lipid droplet surface to mediate lipolysis.::Homo sapiens (taxid: 9606) confident COG5240::SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] 100.00::18-323 PF01602::Adaptin_N 100.00::27-322 GO:0005783::endoplasmic reticulum confident hh_3tjz_B_1::18-249,257-323 very confident psy16364 276 O14617::AP-3 complex subunit delta-1 ::Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to lysosomes.::Homo sapiens (taxid: 9606) confident COG5240::SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] 99.06::3-235 PF01602::Adaptin_N 99.87::3-227 GO:0010008::endosome membrane confident hh_2vgl_A_2::2-60,74-126,128-148,151-159,166-249,251-266 very confident psy2712 602 Q29RF7::Sister chromatid cohesion protein PDS5 homolog A ::Probable regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair.::Homo sapiens (taxid: 9606) portable COG5240::SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] 94.82::85-377 PF01602::Adaptin_N 96.02::88-417 GO:0044427::chromosomal part confident hh_1qgr_A_2::87-138,141-183,196-244,246-252,254-261,265-272,278-316,325-327,331-349,352-379 portable psy8506 131 Q8I0G5::Coatomer subunit gamma ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Required for limiting lipid storage in lipid droplets. Involved in the expansion of luminal extracellular matrices and apical membrane during tubulogenesis. Required in the tracheal epithelium for luminal protein secretion and diametric tube growth. In salivary glands, required for deposition of O-glycans and luminal extracellular matrix assembly. Required for epidermal morphogenesis and cuticle development.::Drosophila melanogaster (taxid: 7227) confident COG5240::SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] 99.92::7-131 PF08752::COP-gamma_platf 100.00::6-131 GO:0010883::regulation of lipid storage confident hh_1r4x_A_1::8-115,117-131 very confident psy15374 205 Q1LZ75::DNA excision repair protein ERCC-1 ::Structure-specific DNA repair endonuclease responsible for the 5'-incision during DNA repair.::Bos taurus (taxid: 9913) confident COG5241::RAD10 Nucleotide excision repair endonuclease NEF1, RAD10 subunit [DNA replication, recombination, and repair] 100.00::66-197 PF03834::Rad10 100.00::69-137 GO:0046982::protein heterodimerization activity confident hh_2a1i_A_1::64-95,97-193 very confident psy7279 195 no hit no match COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.44::55-122 PF13639::zf-RING_2 99.53::74-117 GO:0004842::ubiquitin-protein ligase activity confident hh_3dpl_R_1::72-122 confident psy15061 226 P62447::Zinc finger protein-like 1 ::Required for cis-Golgi integrity and efficient ER to Golgi transport.::Danio rerio (taxid: 7955) confident COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 98.83::49-105 PF13639::zf-RING_2 99.27::52-101 GO:0005794::Golgi apparatus very confident hh_1t1h_A_1::50-62,65-86,94-108 confident psy4226 183 Q9ULK6::RING finger protein 150 ::::Homo sapiens (taxid: 9606) portable COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.55::120-179 PF13639::zf-RING_2 99.72::124-167 GO:0005794::Golgi apparatus confident hh_2l0b_A_1::97-117,119-172 very confident psy12455 152 Q9ULK6::RING finger protein 150 ::::Homo sapiens (taxid: 9606) confident COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.47::21-101 PF13639::zf-RING_2 99.59::54-96 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2l0b_A_1::24-46,48-101 very confident psy8809 261 Q20798::E3 ubiquitin-protein ligase hrd-1 ::Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated ubc-7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system, which is also called the ER-associated degradation (ERAD) system, involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Thought to play a role together with hsp-3 in developmental growth and function of intestinal cells and to play a role together with hsp-4 in gonad formation.::Caenorhabditis elegans (taxid: 6239) portable COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.95::7-260 PF13639::zf-RING_2 99.46::221-260 GO:0006986::response to unfolded protein confident hh_2ect_A_1::218-260 very confident psy11807 88 Q8R1Z9::RING finger protein 121 ::::Mus musculus (taxid: 10090) confident COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.12::4-42 PF13639::zf-RING_2 99.41::2-37 GO:0008270::zinc ion binding confident hh_2ecv_A_1::5-48 confident psy8622 101 Q9Y4L5::E3 ubiquitin-protein ligase RNF115 ::Acts as an E2-dependent E3 ubiquitin-protein ligase. May be involved in endocytic trafficking.::Homo sapiens (taxid: 9606) portable COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.44::35-87 PF13639::zf-RING_2 99.73::41-83 GO:0031090::organelle membrane confident hh_2ect_A_1::35-99 very confident psy14787 81 Q5R476::E3 ubiquitin-protein ligase Arkadia ::Acts in the NODAL pathway of mesoderm patterning during embryonic development. Acts downstream AXIN1 as an E3 ubiquitin-protein ligase which promotes the ubiquitination of inhibitory SMADs such as SMAD7, induces their proteasomal degradation and thereby enhances the transcriptional activity of TGF-beta and BMP. Activates Smad3/Smad4-dependent transcription by triggering signal-induced SnoN degradation.::Pongo abelii (taxid: 9601) confident COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.53::10-75 PF13639::zf-RING_2 99.62::17-66 GO:0043234::protein complex confident hh_2kiz_A_1::14-28,35-74 very confident psy9235 317 Q8IWV8::E3 ubiquitin-protein ligase UBR2 ::E3 ubiquitin-protein ligase which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N-terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. Plays a critical role in chromatin inactivation and chromosome-wide transcriptional silencing during meiosis via ubiquitination of histone H2A. Binds leucine and is a negative regulator of the leucine-mTOR signaling pathway, thereby controlling cell growth.::Homo sapiens (taxid: 9606) portable COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 94.81::118-134 PF13639::zf-RING_2 97.01::113-134 GO:0044763::single-organism cellular process confident hh_2ecv_A_1::117-138,156-170 portable psy16915 175 Q20798::E3 ubiquitin-protein ligase hrd-1 ::Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated ubc-7 E2 ligase and transfers it to substrates, promoting their degradation. Component of the endoplasmic reticulum quality control (ERQC) system, which is also called the ER-associated degradation (ERAD) system, involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Also promotes the degradation of normal but naturally short-lived proteins. Protects cells from ER stress-induced apoptosis. Thought to play a role together with hsp-3 in developmental growth and function of intestinal cells and to play a role together with hsp-4 in gonad formation.::Caenorhabditis elegans (taxid: 6239) confident COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.93::2-174 PF13705::TRC8_N 97.32::64-173 GO:0006986::response to unfolded protein confident no hit no match psy8810 218 no hit no match COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 100.00::1-217 PF13705::TRC8_N 97.48::30-216 GO:0006986::response to unfolded protein confident no hit no match psy6091 437 Q84ME1::Probable E3 ubiquitin-protein ligase LUL3 ::Acts as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes and then transfers it to substrates (in vitro).::Arabidopsis thaliana (taxid: 3702) portable COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 98.38::203-250 PF13920::zf-C3HC4_3 99.30::204-252 GO:0045744::negative regulation of G-protein coupled receptor protein signaling pathway confident hh_2ea5_A_1::201-235,240-257 very confident psy3884 95 Q5M7Z0::RING finger and transmembrane domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG5243::HRD1 HRD ubiquitin ligase complex, ER membrane component [Posttranslational modification, protein turnover, chaperones] 99.39::26-78 PF15227::zf-C3HC4_4 99.59::36-73 GO:0044446::intracellular organelle part confident hh_2ect_A_1::26-85 very confident psy13905 248 Q20728::Tubulin-specific chaperone B ::Binds to alpha-tubulin folding intermediates after their interaction with cytosolic chaperonin in the pathway leading from newly synthesized tubulin to properly folded heterodimer.::Caenorhabditis elegans (taxid: 6239) confident COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 99.79::161-231 PF01302::CAP_GLY 99.94::165-232 GO:0005829::cytosol confident hh_1lpl_A_1::156-240,242-244 very confident psy6084 106 Q9NQT8::Kinesin-like protein KIF13B ::Involved in reorganization of the cortical cytoskeleton. Regulates axon formation by promoting the formation of extra axons. May be functionally important for the intracellular trafficking of MAGUKs and associated protein complexes.::Homo sapiens (taxid: 9606) portable COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 99.82::15-83 PF01302::CAP_GLY 99.96::18-84 GO:0005829::cytosol confident hh_2cp5_A_1::10-26,28-87 very confident psy18049 204 Q9VJE5::Restin homolog ::Together CLIP-190 and jar may coordinate the interaction between the actin and microtubule cytoskeleton. May link endocytic vesicles to microtubules. May play a role in formation of furrows during cellularization.::Drosophila melanogaster (taxid: 7227) confident COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 99.77::37-104 PF01302::CAP_GLY 99.93::40-105 GO:0005876::spindle microtubule confident hh_2z0w_A_1::35-109 very confident psy3317 173 Q9NQT8::Kinesin-like protein KIF13B ::Involved in reorganization of the cortical cytoskeleton. Regulates axon formation by promoting the formation of extra axons. May be functionally important for the intracellular trafficking of MAGUKs and associated protein complexes.::Homo sapiens (taxid: 9606) portable COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 99.78::82-152 PF01302::CAP_GLY 99.94::85-151 GO:0042803::protein homodimerization activity confident rp_2cow_A_1::55-72,79-93,95-150 very confident psy4533 365 O55156::CAP-Gly domain-containing linker protein 2 ::Seems to link microtubules to dendritic lamellar body (DLB), a membranous organelle predominantly present in bulbous dendritic appendages of neurons linked by dendrodendritic gap junctions. May operates in the control of brain-specific organelle translocations.::Rattus norvegicus (taxid: 10116) portable COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 99.76::265-335 PF01302::CAP_GLY 99.91::268-336 GO:0043234::protein complex confident bp_2cp6_A_1::246-259,265-274,278-358 very confident psy9801 132 O42184::CAP-Gly domain-containing linker protein 1 ::Binds to the plus end of microtubules and regulates the dynamics of the microtubule cytoskeleton. Promotes microtubule growth and microtubule bundling. Links cytoplasmic vesicles to microtubules and thereby plays an important role in intracellular vesicle trafficking. Plays a role macropinocytosis and endosome trafficking.::Gallus gallus (taxid: 9031) confident COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 99.82::20-90 PF01302::CAP_GLY 99.96::23-88 GO:0051010::microtubule plus-end binding confident hh_2e3h_A_1::20-94 very confident psy18052 98 O55156::CAP-Gly domain-containing linker protein 2 ::Seems to link microtubules to dendritic lamellar body (DLB), a membranous organelle predominantly present in bulbous dendritic appendages of neurons linked by dendrodendritic gap junctions. May operates in the control of brain-specific organelle translocations.::Rattus norvegicus (taxid: 10116) confident COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 99.68::5-70 PF01302::CAP_GLY 99.89::3-61 GO:0051010::microtubule plus-end binding confident hh_2cp5_A_1::4-46,49-69 very confident psy9363 421 Q5RBD9::Tubulin-specific chaperone E ::Tubulin-folding protein; involved in the second step of the tubulin folding pathway. Seems to be implicated in the maintenance of the neuronal microtubule network. Involved in regulation of tubulin heterodimer dissociation.::Pongo abelii (taxid: 9601) portable COG5244::NIP100 Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell division and chromosome partitioning] 98.62::183-249 PF14580::LRR_9 99.67::14-154 GO:0005737::cytoplasm confident hh_2z0w_A_1::181-220,222-238,240-266 very confident psy16636 425 P37276::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Drosophila melanogaster (taxid: 7227) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 96.84::8-113 PF03028::Dynein_heavy 100.00::8-421 GO:0005794::Golgi apparatus confident hh_3vkg_A_1::1-60,66-149,153-269,274-274,277-322,326-327,329-335,337-423 very confident psy12182 1507 P37276::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Drosophila melanogaster (taxid: 7227) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.71::750-1064 PF03028::Dynein_heavy 100.00::668-1374 GO:0005794::Golgi apparatus confident hh_3vkg_A_1::589-746,749-1013,1019-1100,1104-1221,1225-1226,1230-1276,1280-1281,1283-1285,1287-1374 very confident psy16637 264 Q9JHU4::Cytoplasmic dynein 1 heavy chain 1 ::Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Mus musculus (taxid: 10090) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.65::70-257 PF03028::Dynein_heavy 100.00::1-257 GO:0005794::Golgi apparatus confident hh_3vkg_A_1::1-33,36-256 very confident psy12684 163 Q63170::Dynein heavy chain 7, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Rattus norvegicus (taxid: 10116) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 97.69::11-149 PF03028::Dynein_heavy 99.94::6-161 GO:0005929::cilium confident hh_3vkg_A_1::6-61,96-160 very confident psy17361 219 Q9JJ79::Cytoplasmic dynein 2 heavy chain 1 ::May function as a motor for intraflagellar retrograde transport. Functions in cilia biogenesis. May play a role in transport between endoplasmic reticulum and Golgi or organization of the Golgi in cells.::Rattus norvegicus (taxid: 10116) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.69::1-150 PF03028::Dynein_heavy 100.00::2-219 GO:0030154::cell differentiation confident hh_3vkg_A_1::2-137,139-190,192-219 very confident psy12537 140 Q9JJ79::Cytoplasmic dynein 2 heavy chain 1 ::May function as a motor for intraflagellar retrograde transport. Functions in cilia biogenesis. May play a role in transport between endoplasmic reticulum and Golgi or organization of the Golgi in cells.::Rattus norvegicus (taxid: 10116) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.45::2-118 PF03028::Dynein_heavy 100.00::2-138 GO:0030154::cell differentiation confident hh_3vkg_A_1::2-125,127-139 very confident psy17977 362 Q9C0G6::Dynein heavy chain 6, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Homo sapiens (taxid: 9606) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.47::10-196 PF03028::Dynein_heavy 100.00::6-338 GO:0031514::motile cilium confident hh_3vkg_A_1::6-37,40-152,156-338 very confident psy12682 755 Q63170::Dynein heavy chain 7, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Rattus norvegicus (taxid: 10116) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::3-600 PF03028::Dynein_heavy 100.00::265-750 GO:0035085::cilium axoneme confident hh_3vkg_A_1::1-173,175-402,406-456,460-506,509-510,512-515,518-609,613-696,702-709,713-748 very confident psy2649 1637 Q69Z23::Dynein heavy chain 17, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Mus musculus (taxid: 10090) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::2-1346 PF03028::Dynein_heavy 100.00::940-1637 GO:0044699::single-organism process confident hh_3vkg_A_1::5-19,24-28,30-184,193-363,371-376,398-403,405-407,428-549,551-621,623-804,806-870,915-1073,1079-1130,1133-1149,1155-1190,1193-1394,1396-1537,1542-1542,1544-1571,1576-1610,1612-1637 very confident psy17621 448 P34036::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Dictyostelium discoideum (taxid: 44689) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 98.34::157-438 PF08393::DHC_N2 100.00::6-447 GO:0005737::cytoplasm confident hh_3vkg_A_1::4-32,37-115,118-215,223-230,253-257,268-270,284-287,300-304,310-401,406-447 very confident psy4734 367 Q8BW94::Dynein heavy chain 3, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Mus musculus (taxid: 10090) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.09::13-131 PF08393::DHC_N2 100.00::1-137 GO:0005794::Golgi apparatus confident hh_3vkg_A_1::175-211,220-354 very confident psy4730 1513 Q8TD57::Dynein heavy chain 3, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Homo sapiens (taxid: 9606) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::94-1506 PF08393::DHC_N2 100.00::95-507 GO:0005929::cilium confident hh_3vkg_A_1::90-159,164-208,210-265,267-476,478-698,758-759,1025-1035,1122-1381,1390-1513 very confident psy9553 1282 Q8VHE6::Dynein heavy chain 5, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles.::Mus musculus (taxid: 10090) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::313-1282 PF08393::DHC_N2 100.00::410-820 GO:0007605::sensory perception of sound confident hh_3vkg_A_1::404-518,521-577,579-584,587-692,694-767,769-1096,1098-1125,1130-1132,1150-1199,1202-1206,1211-1242,1244-1282 very confident psy17620 741 Q8IVF4::Dynein heavy chain 10, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.::Homo sapiens (taxid: 9606) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.97::175-740 PF12774::AAA_6 100.00::367-568 GO:0005929::cilium confident hh_3vkg_A_1::155-203,207-213,232-351,367-740 very confident psy16634 3090 Q19020::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Caenorhabditis elegans (taxid: 6239) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::963-3005 PF12774::AAA_6 100.00::2332-2527 GO:0043234::protein complex confident hh_3vkg_A_1::1727-2076,2160-2183,2190-2219,2230-2244,2250-2305,2309-2527,2547-2608,2623-2673,2691-2994,2997-3090 very confident psy9563 192 Q8VHE6::Dynein heavy chain 5, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles.::Mus musculus (taxid: 10090) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.93::1-178 PF12775::AAA_7 100.00::1-146 GO:0005930::axoneme confident hh_4akg_A_1::1-10,12-70,75-105,107-192 very confident psy17974 583 Q9C0G6::Dynein heavy chain 6, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Homo sapiens (taxid: 9606) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::304-572 PF12775::AAA_7 100.00::374-574 GO:0042995::cell projection confident rp_3vkg_A_2::137-270 very confident psy2656 85 Q69Z23::Dynein heavy chain 17, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Mus musculus (taxid: 10090) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.32::1-84 PF12775::AAA_7 99.81::1-53 GO:0044699::single-organism process confident hh_4akg_A_1::1-12,14-84 very confident psy12737 60 Q8IVF4::Dynein heavy chain 10, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.::Homo sapiens (taxid: 9606) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 96.17::9-60 PF12775::AAA_7 99.78::6-60 GO:0044699::single-organism process confident hh_4akg_A_1::8-60 very confident psy17141 141 P0C6F1::Dynein heavy chain 2, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Mus musculus (taxid: 10090) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 98.47::6-99 PF12777::MT 99.93::10-140 GO:0005929::cilium confident hh_2rr7_A_1::11-25,31-98 very confident psy12680 2567 P34036::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Dictyostelium discoideum (taxid: 44689) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::9-2564 PF12777::MT 100.00::2092-2465 GO:0042995::cell projection confident hh_2rr7_A_1::2194-2297,2299-2347 very confident psy568 1614 Q9JHU4::Cytoplasmic dynein 1 heavy chain 1 ::Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Mus musculus (taxid: 10090) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::35-1614 PF12780::AAA_8 100.00::727-1015 GO:0005794::Golgi apparatus confident hh_3err_A_1::1087-1180,1182-1261 very confident psy1733 3228 Q19020::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Caenorhabditis elegans (taxid: 6239) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::736-3140 PF12780::AAA_8 100.00::2589-2897 GO:0042995::cell projection confident hh_3vkg_A_1::1-44,47-94,96-204,207-212,215-272,277-480,493-550,560-624,628-651,657-764,1163-1216,1222-1379,1381-1447,1460-1475,1477-1492,2170-2178,2320-2368,2371-2536,2549-2560,2569-2572,2574-2592,2594-2735,2737-2808,2823-2966,3008-3039,3061-3156 very confident psy12736 567 Q8IVF4::Dynein heavy chain 10, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.::Homo sapiens (taxid: 9606) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::80-552 PF12780::AAA_8 100.00::414-562 GO:0044446::intracellular organelle part confident hh_3vkg_A_1::30-116,131-236,238-249,251-294,296-384,392-397,399-417,421-546,548-559 very confident psy17980 252 Q9C0G6::Dynein heavy chain 6, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Homo sapiens (taxid: 9606) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.36::5-252 PF12781::AAA_9 100.00::4-252 GO:0005794::Golgi apparatus confident hh_3vkg_A_1::1-36,38-54,146-252 very confident psy17844 127 Q63170::Dynein heavy chain 7, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Rattus norvegicus (taxid: 10116) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.32::1-126 PF12781::AAA_9 100.00::3-124 GO:0017111::nucleoside-triphosphatase activity confident hh_3vkg_A_1::1-127 very confident psy4724 1650 Q8TD57::Dynein heavy chain 3, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Homo sapiens (taxid: 9606) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 100.00::28-1188 PF12781::AAA_9 100.00::898-1127 GO:0031514::motile cilium confident no hit no match psy12734 217 Q8IVF4::Dynein heavy chain 10, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.::Homo sapiens (taxid: 9606) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 99.22::2-195 PF12781::AAA_9 99.84::106-197 GO:0035085::cilium axoneme confident hh_3vkg_A_1::2-83,85-197 very confident psy12041 153 Q8IVF4::Dynein heavy chain 10, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.::Homo sapiens (taxid: 9606) portable COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 98.65::12-151 PF12781::AAA_9 100.00::1-153 GO:0043234::protein complex confident hh_3vkg_A_1::2-56,65-74,76-83,86-153 very confident psy4736 98 Q63170::Dynein heavy chain 7, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Rattus norvegicus (taxid: 10116) confident COG5245::DYN1 Dynein, heavy chain [Cytoskeleton] 95.73::8-83 no hit no match GO:0031514::motile cilium confident hh_4akg_A_1::7-17,20-98 confident psy9531 409 Q8WUQ7::Cactin ::May be involved in pre-mRNA splicing.::Homo sapiens (taxid: 9606) portable COG5246::PRP11 Splicing factor 3a, subunit 2 [RNA processing and modification] 91.36::325-383 PF09732::CactinC_cactus 100.00::285-397 GO:0005634::nucleus confident hh_4dgw_C_1::323-360,362-384 confident psy9880 280 Q15428::Splicing factor 3A subunit 2 ::Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex.::Homo sapiens (taxid: 9606) confident COG5246::PRP11 Splicing factor 3a, subunit 2 [RNA processing and modification] 100.00::1-261 PF09732::CactinC_cactus 99.59::152-259 GO:0040035::hermaphrodite genitalia development confident hh_4dgw_C_1::137-172,184-184,189-195,197-215,217-263 very confident psy1344 286 Q15428::Splicing factor 3A subunit 2 ::Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex.::Homo sapiens (taxid: 9606) confident COG5246::PRP11 Splicing factor 3a, subunit 2 [RNA processing and modification] 100.00::1-216 PF09732::CactinC_cactus 99.63::125-215 GO:0071013::catalytic step 2 spliceosome very confident hh_4dgw_C_1::109-162,164-215 very confident psy7662 220 Q5R9W6::Transcription initiation factor TFIID subunit 13 ::TFIID beta-specific TAFII.::Pongo abelii (taxid: 9601) confident COG5248::TAF19 Transcription initiation factor TFIID, subunit TAF13 [Transcription] 99.94::119-215 PF02269::TFIID-18kDa 100.00::124-213 GO:0003677::DNA binding confident hh_1bh9_A_2::125-169 confident psy9230 361 Q5R5U4::Protein RER1 ::Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.::Pongo abelii (taxid: 9601) confident COG5249::RER1 Golgi protein involved in Golgi-to-ER retrieval [Intracellular trafficking and secretion] 100.00::14-350 PF03248::Rer1 100.00::13-350 GO:0005794::Golgi apparatus confident rp_1vt4_I_1::21-55,64-71,84-98,101-145,149-195,199-202,205-243,248-270 portable psy14375 206 Q9VEA5::DNA-directed RNA polymerase II 16 kDa polypeptide ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Associates with POLR2G.::Drosophila melanogaster (taxid: 7227) very confident COG5250::RPB4 RNA polymerase II, fourth largest subunit [Transcription] 99.97::75-205 PF03874::RNA_pol_Rpb4 99.92::95-202 GO:0005665::DNA-directed RNA polymerase II, core complex very confident hh_2c35_A_1::72-206 very confident psy13513 71 Q5RA91::Transcription initiation factor TFIID subunit 11 ::Core TAFII present in both of the previously described TFIID species which either lack or contain TAFII30 (TFIID alpha and TFIID beta respectively).::Pongo abelii (taxid: 9601) confident COG5251::TAF40 Transcription initiation factor TFIID, subunit TAF11 [Transcription] 99.95::3-70 PF04719::TAFII28 100.00::9-71 GO:0003677::DNA binding confident hh_1bh9_B_1::16-71 very confident psy12936 187 Q7JWR9::Zinc finger CCCH domain-containing protein 15 homolog ::::Drosophila melanogaster (taxid: 7227) confident COG5252::Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only] 100.00::1-141 PF01396::zf-C4_Topoisom 95.72::9-34 GO:0043229::intracellular organelle confident hh_4a9a_C_1::45-67,70-101,105-142 confident psy8772 234 Q9H446::RWD domain-containing protein 1 ::Protects DRG2 from proteolytic degradation.::Homo sapiens (taxid: 9606) confident COG5252::Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only] 97.23::126-197 PF05773::RWD 99.87::3-110 GO:0040010::positive regulation of growth rate confident hh_2ebm_A_1::2-119 very confident psy12937 111 Q8WU90::Zinc finger CCCH domain-containing protein 15 ::Protects DRG1 from proteolytic degradation.::Homo sapiens (taxid: 9606) confident COG5252::Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only] 99.97::16-111 PF14608::zf-CCCH_2 90.04::100-111 GO:0042788::polysomal ribosome confident hh_3d2n_A_1::78-89,100-111 portable psy13653 2910 O96838::Putative 1-phosphatidylinositol 3-phosphate 5-kinase ::The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. Has a role at a late stage in endosome-related membrane trafficking, at a point when signal termination has occurred. Is not required for receptor silencing.::Drosophila melanogaster (taxid: 7227) portable COG5253::MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] 100.00::2083-2456 PF00118::Cpn60_TCP1 100.00::2484-2895 GO:0005737::cytoplasm confident hh_3p9d_C_1::2470-2496,2500-2520,2522-2551,2559-2574,2576-2586,2592-2611,2615-2785,2787-2805,2808-2818,2820-2892 very confident psy18037 1390 O96838::Putative 1-phosphatidylinositol 3-phosphate 5-kinase ::The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. Has a role at a late stage in endosome-related membrane trafficking, at a point when signal termination has occurred. Is not required for receptor silencing.::Drosophila melanogaster (taxid: 7227) confident COG5253::MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] 100.00::1083-1389 PF00118::Cpn60_TCP1 99.97::128-393 GO:0043229::intracellular organelle confident hh_3iyg_D_1::127-144,146-174,176-204,206-307,309-326,329-395 very confident psy1357 113 Q9Z1T6::1-phosphatidylinositol 3-phosphate 5-kinase ::The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. The product of the reaction it catalyzes functions as an important regulator of vacuole homeostasis perhaps by controlling membrane flux to and/or from the vacuole.::Mus musculus (taxid: 10090) confident COG5253::MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] 99.82::2-96 PF01504::PIP5K 99.97::1-86 GO:0005829::cytosol confident hh_2ybx_A_1::1-56,58-60,62-86 very confident psy11937 302 Q80XI4::Phosphatidylinositol 5-phosphate 4-kinase type-2 beta ::Participates in the biosynthesis of phosphatidylinositol 4,5-bisphosphate.::Mus musculus (taxid: 10090) confident COG5253::MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] 100.00::1-302 PF01504::PIP5K 100.00::1-301 GO:0031090::organelle membrane confident hh_2ybx_A_1::1-182,189-198,201-203,206-224,226-279,281-301 very confident psy18041 661 Q9Z1T6::1-phosphatidylinositol 3-phosphate 5-kinase ::The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. The product of the reaction it catalyzes functions as an important regulator of vacuole homeostasis perhaps by controlling membrane flux to and/or from the vacuole.::Mus musculus (taxid: 10090) portable COG5253::MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] 99.92::485-658 PF01504::PIP5K 99.94::3-109 GO:0043231::intracellular membrane-bounded organelle confident hh_2ybx_A_1::3-79,82-109 very confident psy4595 286 Q9R0I8::Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha ::Catalyzes the phosphorylation of phosphatidylinositol 5-phosphate (PtdIns5P) on the fourth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). May exert its function by regulating the levels of PtdIns5P, which functions in the cytosol by increasing AKT activity and in the nucleus signals through ING2. May regulate the pool of cytosolic PtdIns5P in response to the activation of tyrosine phosphorylation. May be involved in thrombopoiesis and the terminal maturation of megakaryocytes and regulation of their size (By similarity). May negatively regulate insulin-stimulated glucose uptake by lowering the levels of PtdIns5P.::Rattus norvegicus (taxid: 10116) portable COG5253::MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] 98.16::215-285 no hit no match GO:0016307::phosphatidylinositol phosphate kinase activity confident hh_2ybx_A_1::138-176,233-286 very confident psy12244 257 Q8N442::Translation factor GUF1, mitochondrial ::Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.::Homo sapiens (taxid: 9606) confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 99.97::26-227 PF00009::GTP_EFTU 99.92::27-175 GO:0005761::mitochondrial ribosome confident rp_3cb4_D_1::25-88,90-159 very confident psy9646 211 B3WE38::Elongation factor Tu ::This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.::Lactobacillus casei (strain BL23) (taxid: 543734) confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 99.91::2-185 PF00009::GTP_EFTU 99.73::122-211 GO:0005829::cytosol confident rp_2c78_A_1::108-210 very confident psy13961 459 P05303::Elongation factor 1-alpha 2 ::This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.::Drosophila melanogaster (taxid: 7227) very confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 100.00::1-442 PF00009::GTP_EFTU 100.00::5-238 GO:0005829::cytosol very confident hh_1f60_A_1::1-159,162-444 very confident psy10355 156 Q8R050::Eukaryotic peptide chain release factor GTP-binding subunit ERF3A ::Involved in translation termination in response to the termination codons UAA, UAG and UGA. Stimulates the activity of ERF1. Involved in regulation of mammalian cell growth. Component of the transient SURF complex which recruits UPF1 to stalled ribosomes in the context of nonsense-mediated decay (NMD) of mRNAs containing premature stop codons.::Mus musculus (taxid: 10090) confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 99.97::5-151 PF00009::GTP_EFTU 99.93::5-151 GO:0006479::protein methylation confident rp_1r5b_A_1::8-141 very confident psy15201 97 Q9Y450::HBS1-like protein ::::Homo sapiens (taxid: 9606) confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 99.92::9-95 PF00009::GTP_EFTU 98.87::9-69 GO:0043234::protein complex confident rp_1r5b_A_1::13-73,75-90 very confident psy3751 967 A1UK27::Sulfate adenylyltransferase subunit 2 ::::Mycobacterium sp. (strain KMS) (taxid: 189918) confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 100.00::320-744 PF00590::TP_methylase 99.97::738-945 GO:0005773::vacuole confident hh_1zun_A_1::8-291,293-309 very confident psy15224 502 A6T3K6::Elongation factor Tu ::This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.::Janthinobacterium sp. (strain Marseille) (taxid: 375286) very confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 100.00::1-303 PF02357::NusG 99.81::328-427 GO:0045335::phagocytic vesicle confident hh_2c78_A_1::1-96,99-303 very confident psy10357 252 Q8R050::Eukaryotic peptide chain release factor GTP-binding subunit ERF3A ::Involved in translation termination in response to the termination codons UAA, UAG and UGA. Stimulates the activity of ERF1. Involved in regulation of mammalian cell growth. Component of the transient SURF complex which recruits UPF1 to stalled ribosomes in the context of nonsense-mediated decay (NMD) of mRNAs containing premature stop codons.::Mus musculus (taxid: 10090) confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 100.00::3-252 PF03143::GTP_EFTU_D3 99.75::156-252 GO:0005829::cytosol confident hh_3e1y_E_1::68-252 very confident psy10356 129 Q8R050::Eukaryotic peptide chain release factor GTP-binding subunit ERF3A ::Involved in translation termination in response to the termination codons UAA, UAG and UGA. Stimulates the activity of ERF1. Involved in regulation of mammalian cell growth. Component of the transient SURF complex which recruits UPF1 to stalled ribosomes in the context of nonsense-mediated decay (NMD) of mRNAs containing premature stop codons.::Mus musculus (taxid: 10090) confident COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 99.96::6-129 PF03143::GTP_EFTU_D3 99.97::19-128 GO:0006479::protein methylation confident hh_3e1y_E_1::6-15,19-129 very confident psy15204 232 Q9HGI6::Eukaryotic peptide chain release factor GTP-binding subunit ::Involved in translation termination. Stimulates the activity of ERF1. Binds guanine nucleotides.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) portable COG5256::TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis] 100.00::16-219 PF03143::GTP_EFTU_D3 99.88::114-219 GO:0032991::macromolecular complex confident hh_1f60_A_1::18-65,91-105,108-122,125-222,224-226 very confident psy1174 182 Q09130::Eukaryotic translation initiation factor 2 subunit gamma ::eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5257::GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] 99.96::15-172 PF00009::GTP_EFTU 99.90::15-167 GO:0005829::cytosol confident rp_1s0u_A_1::21-68,74-86,96-135 very confident psy13818 207 Q9Z0N1::Eukaryotic translation initiation factor 2 subunit 3, X-linked ::eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.::Mus musculus (taxid: 10090) confident COG5257::GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] 100.00::1-144 PF09173::eIF2_C 99.97::30-144 GO:0005829::cytosol confident hh_1s0u_A_1::2-44,69-70,76-145 very confident psy1177 283 Q9Z0N1::Eukaryotic translation initiation factor 2 subunit 3, X-linked ::eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by eIF-2B.::Mus musculus (taxid: 10090) confident COG5257::GCD11 Translation initiation factor 2, gamma subunit (eIF-2gamma; GTPase) [Translation, ribosomal structure and biogenesis] 100.00::2-260 PF09173::eIF2_C 99.70::169-259 GO:0005829::cytosol confident hh_1s0u_A_1::2-103,105-188,194-260 very confident psy140 184 O08582::GTP-binding protein 1 ::Promotes degradation of target mRNA species. Plays a role in the regulation of circadian mRNA stability. Binds GTP and has GTPase activity.::Mus musculus (taxid: 10090) confident COG5258::GTPBP1 GTPase [General function prediction only] 99.79::1-97 PF03143::GTP_EFTU_D3 99.91::9-98 GO:0005829::cytosol confident hh_1r5b_A_1::1-69,71-98 very confident psy639 114 Q9WU42::Nuclear receptor corepressor 2 ::Transcriptional corepressor of NR4A2/NURR1 and acts through histone deacetylases (HDACs) to keep promoters of NR4A2/NURR1 target genes in a repressed deacetylated state. Mediates the transcriptional repression activity of some nuclear receptors by promoting chromatin condensation, thus preventing access of the basal transcription.::Mus musculus (taxid: 10090) confident COG5259::RSC8 RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription] 97.60::49-103 PF00249::Myb_DNA-binding 99.24::49-93 GO:0000785::chromatin confident hh_4a69_C_1::5-21,24-99 very confident psy8149 182 Q8IXM2::Chromatin complexes subunit BAP18 ::Component of chromatin complexes such as the MLL1/MLL and NURF complexes.::Homo sapiens (taxid: 9606) confident COG5259::RSC8 RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription] 97.56::32-71 PF00249::Myb_DNA-binding 98.92::32-74 GO:0016589::NURF complex confident hh_2ltp_A_1::30-72 confident psy1763 365 Q5UAK0::Mesoderm induction early response protein 1 ::Transcriptional repressor regulating the expression of a number of genes including SP1 target genes. Probably functions through recruitment of HDAC1 a histone deacetylase involved in chromatin silencing.::Mus musculus (taxid: 10090) confident COG5259::RSC8 RSC chromatin remodeling complex subunit RSC8 [Chromatin structure and dynamics / Transcription] 93.99::209-259 PF01448::ELM2 99.39::105-158 GO:0000118::histone deacetylase complex confident hh_2xag_B_1::99-141,143-159,173-200,202-203,207-235,237-273 very confident psy12993 243 Q9UT49::Poly(A) RNA polymerase cid13 ::Polymerase that creates the 3' poly(A) tail of suc22 mRNA.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5260::TRF4 DNA polymerase sigma [DNA replication, recombination, and repair] 100.00::5-242 PF01909::NTP_transf_2 98.48::7-49 GO:0005829::cytosol confident hh_3pq1_A_1::5-79,107-108,122-212,214-226 very confident psy10458 563 Q9D0D3::Poly(A) RNA polymerase, mitochondrial ::Polymerase that creates the 3' poly(A) tail of mitochondrial transcripts. Can use all four nucleotides, but has higher activity with ATP and UTP (in vitro). Plays a role in replication-dependent histone mRNA degradation. May be involved in the terminal uridylation of mature histone mRNAs before their degradation is initiated. Might be responsible for the creation of some UAA stop codons which are not encoded in mtDNA.::Mus musculus (taxid: 10090) confident COG5260::TRF4 DNA polymerase sigma [DNA replication, recombination, and repair] 100.00::136-477 PF04928::PAP_central 99.84::288-498 GO:0005794::Golgi apparatus confident hh_3pq1_A_1::18-56,59-78,86-92,115-115,123-222,224-247,256-366,368-387,393-422,445-478,481-500 very confident psy14861 1648 P21359::Neurofibromin ::Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.::Homo sapiens (taxid: 9606) confident COG5261::IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms] 99.60::339-582 PF00616::RasGAP 100.00::983-1157 GO:0046580::negative regulation of Ras protein signal transduction confident hh_3pg7_A_1::1295-1413,1415-1484,1486-1522,1525-1553 very confident psy9662 110 P08991::Histone H2A.V (Fragment) ::Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. May be involved in the formation of constitutive heterochromatin. May be required for chromosome segregation during cell division.::Strongylocentrotus purpuratus (taxid: 7668) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::3-107 PF00125::Histone 99.60::3-76 GO:0001740::Barr body very confident hh_1f66_C_1::4-109 very confident psy3828 365 P27661::Histone H2A.x ::Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. Required for checkpoint-mediated arrest of cell cycle progression in response to low doses of ionizing radiation and for efficient repair of DNA double strand breaks (DSBs) specifically when modified by C-terminal phosphorylation.::Mus musculus (taxid: 10090) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::39-152 PF00125::Histone 99.38::272-340 GO:0005576::extracellular region very confident hh_2nqb_C_1::37-151 very confident psy17765 475 Q64523::Histone H2A type 2-C ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::123-240 PF00125::Histone 99.26::138-210 GO:0005576::extracellular region very confident hh_2nqb_C_1::124-240 very confident psy12658 67 Q64523::Histone H2A type 2-C ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 99.60::21-64 PF00125::Histone 94.79::29-64 GO:0005730::nucleolus confident hh_2f8n_K_1::7-64 very confident psy5184 209 Q6GSS7::Histone H2A type 2-A ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::26-136 PF00125::Histone 99.36::32-104 GO:0005730::nucleolus very confident hh_2f8n_K_1::22-136 very confident psy7393 549 P02263::Histone H2A-IV ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Gallus gallus (taxid: 9031) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::211-330 PF00125::Histone 99.18::224-296 GO:0006915::apoptotic process very confident hh_2f8n_K_1::206-329 very confident psy3662 132 Q96KK5::Histone H2A type 1-H ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Homo sapiens (taxid: 9606) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::14-121 PF00125::Histone 99.57::18-90 GO:0031298::replication fork protection complex very confident hh_2f8n_K_1::1-124 very confident psy3827 581 P68431::Histone H3.1 ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Homo sapiens (taxid: 9606) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::4-115 PF00125::Histone 99.65::503-577 GO:0031618::nuclear centromeric heterochromatin very confident hh_2nqb_D_1::229-330 very confident psy7425 331 Q71DI3::Histone H3.2 ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Homo sapiens (taxid: 9606) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::211-329 PF00125::Histone 99.60::102-182 GO:0031618::nuclear centromeric heterochromatin very confident hh_2nqb_C_1::209-331 very confident psy15119 96 Q64523::Histone H2A type 2-C ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::4-96 PF00125::Histone 99.69::18-90 GO:0042742::defense response to bacterium very confident hh_2f8n_K_1::1-96 very confident psy17762 124 Q64523::Histone H2A type 2-C ::Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.::Mus musculus (taxid: 10090) very confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 100.00::3-122 PF00125::Histone 99.59::18-90 GO:0042742::defense response to bacterium very confident hh_2nqb_C_1::2-124 very confident psy17173 1108 Q62245::Son of sevenless homolog 1 ::Promotes the exchange of Ras-bound GDP by GTP.::Mus musculus (taxid: 10090) confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 99.93::103-192 PF00617::RasGEF 100.00::780-964 GO:0005829::cytosol confident hh_2ii0_A_1::570-724,726-1031,1033-1050 very confident psy1414 551 P26675::Protein son of sevenless ::Promotes the exchange of Ras-bound GDP by GTP. Functions in signaling pathways initiated by the sevenless and epidermal growth factor receptor tyrosine kinases; implies a role for the ras pathway in neuronal development.::Drosophila melanogaster (taxid: 7227) confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 99.96::116-214 PF00621::RhoGEF 99.85::306-521 GO:0043234::protein complex confident hh_3ksy_A_1::36-82,84-122,124-137,139-203,207-217,227-228,295-411,443-528,531-545 very confident psy71 218 P08991::Histone H2A.V (Fragment) ::Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. May be involved in the formation of constitutive heterochromatin. May be required for chromosome segregation during cell division.::Strongylocentrotus purpuratus (taxid: 7668) confident COG5262::HTA1 Histone H2A [Chromatin structure and dynamics] 99.71::1-51 PF04124::Dor1 97.34::56-166 GO:0006334::nucleosome assembly confident hh_2f8n_K_1::1-52 very confident psy13234 1192 Q9DC29::ATP-binding cassette sub-family B member 6, mitochondrial ::Binds heme and porphyrins and functions in their ATP-dependent uptake into the mitochondria. Plays a crucial role in heme synthesis.::Mus musculus (taxid: 10090) confident COG5265::ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones] 100.00::471-1171 PF00005::ABC_tran 99.96::914-1103 GO:0031090::organelle membrane confident hh_2ff7_A_1::895-897,900-918,922-929,933-1010,1045-1173 very confident psy6717 373 Q5F1R6::DnaJ homolog subfamily C member 21 ::May act as a co-chaperone for HSP70.::Homo sapiens (taxid: 9606) confident COG5269::ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] 100.00::2-221 PF00226::DnaJ 99.69::3-66 GO:0008270::zinc ion binding confident hh_2lgw_A_1::1-75 very confident psy4122 162 B0R0T1::von Willebrand factor A domain-containing protein 8 ::::Danio rerio (taxid: 7955) confident COG5271::MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] 99.90::9-160 PF07728::AAA_5 99.93::46-146 GO:0005739::mitochondrion confident hh_1d2n_A_1::44-79,85-96,100-136 confident psy1953 379 Q56A18::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Required for the coactivation of estrogen responsive promoters by Swi/Snf complexes and the SRC/p160 family of histone acetyltransferases (HATs). Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.::Rattus norvegicus (taxid: 10116) confident COG5271::MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] 99.43::325-377 PF07728::AAA_5 98.16::332-378 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_4euw_A_1::8-52 portable psy2654 1949 Q19020::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Caenorhabditis elegans (taxid: 6239) portable COG5271::MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] 100.00::1021-1909 PF12774::AAA_6 100.00::1400-1682 GO:0005930::axoneme confident hh_3vkg_A_1::293-317,319-359,379-419,452-455,457-510,512-738,775-778,803-805,835-844,871-900,917-917,920-1002,1386-1516,1569-1926 very confident psy6129 383 Q8VHE6::Dynein heavy chain 5, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles.::Mus musculus (taxid: 10090) confident COG5271::MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] 99.93::64-383 PF12774::AAA_6 100.00::57-288 GO:0007018::microtubule-based movement confident hh_3vkg_A_1::6-383 very confident psy7446 340 Q4WC37::Palmitoyltransferase pfa4 ::::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 100.00::126-339 PF01529::zf-DHHC 100.00::131-294 GO:0005783::endoplasmic reticulum confident no hit no match psy6282 251 Q2TGJ4::Palmitoyltransferase ZDHHC15 ::Palmitoyltransferase specific for GAP43 and DLG4/PSD95.::Rattus norvegicus (taxid: 10116) confident COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 100.00::45-224 PF01529::zf-DHHC 100.00::46-173 GO:0005794::Golgi apparatus confident hh_2ayj_A_1::48-78 portable psy13205 267 Q750R7::Palmitoyltransferase ERF2 ::The ERF2-ERF4 complex is a palmitoyltransferase specific for Ras proteins.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) portable COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 100.00::40-240 PF01529::zf-DHHC 100.00::55-241 GO:0005794::Golgi apparatus confident hh_2ayj_A_1::63-101 portable psy9305 465 Q8R173::Palmitoyltransferase ZDHHC3 ::Palmitoyltransferase with broad specificity. Palmitoylates GABA receptors on their gamma subunit (GABRG1, GABRG2 and GABRG3), which regulates synaptic clustering and/or cell surface stability. Palmitoylates glutamate receptors GRIA1 and GRIA2, which leads to their retention in Golgi.::Mus musculus (taxid: 10090) confident COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 100.00::83-261 PF01529::zf-DHHC 100.00::97-260 GO:0005794::Golgi apparatus confident no hit no match psy9546 385 Q8VYS8::Probable S-acyltransferase At5g50020 ::::Arabidopsis thaliana (taxid: 3702) portable COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 99.97::23-188 PF01529::zf-DHHC 100.00::27-187 GO:0005794::Golgi apparatus confident no hit no match psy14167 341 Q9ESG8::Probable palmitoyltransferase ZDHHC16 ::May be involved in apoptosis regulation.::Mus musculus (taxid: 10090) confident COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 100.00::60-325 PF01529::zf-DHHC 100.00::71-262 GO:0005794::Golgi apparatus confident hh_2ayj_A_1::79-120 portable psy12148 116 no hit no match COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 99.47::44-97 PF01529::zf-DHHC 99.52::76-97 GO:0005794::Golgi apparatus confident no hit no match psy9492 584 Q8IUH5::Palmitoyltransferase ZDHHC17 ::Palmitoyltransferase specific for a subset of neuronal proteins, including SNAP25, DLG4/PSD95, GAD2, SYT1 and HD. May be involved in the sorting or targeting of critical proteins involved in the initiating events of endocytosis at the plasma membrane. Has transforming activity. Mediates Mg(2+) transport.::Homo sapiens (taxid: 9606) confident COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 99.98::336-563 PF01529::zf-DHHC 100.00::349-520 GO:0008021::synaptic vesicle very confident hh_3eu9_A_1::11-219,225-234 very confident psy5540 135 Q8IZN3::Probable palmitoyltransferase ZDHHC14 ::::Homo sapiens (taxid: 9606) confident COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 98.12::14-132 PF01529::zf-DHHC 98.40::75-132 GO:0016409::palmitoyltransferase activity confident no hit no match psy12380 342 Q9UIJ5::Palmitoyltransferase ZDHHC2 ::Palmitoyltransferase specific for GAP43 and DLG4/PSD95.::Homo sapiens (taxid: 9606) confident COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 100.00::75-319 PF01529::zf-DHHC 100.00::88-271 GO:0018345::protein palmitoylation confident hh_2ayj_A_1::146-174 portable psy12159 162 Q58CU4::Probable palmitoyltransferase ZDHHC16 ::May be involved in apoptosis regulation.::Bos taurus (taxid: 9913) confident COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 92.71::3-147 no hit no match GO:0005794::Golgi apparatus confident no hit no match psy8715 164 Q9H6R6::Palmitoyltransferase ZDHHC6 ::::Homo sapiens (taxid: 9606) portable COG5273::Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] 95.67::15-77 no hit no match GO:0043231::intracellular membrane-bounded organelle confident hh_2knc_B_1::2-7,9-54 portable psy16615 110 O48845::Cytochrome b5 isoform B ::Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases.::Arabidopsis thaliana (taxid: 3702) confident COG5274::CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism] 99.87::5-83 PF00173::Cyt-b5 99.93::7-81 GO:0005811::lipid particle confident hh_2ibj_A_1::3-84 very confident psy16594 110 O48845::Cytochrome b5 isoform B ::Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases.::Arabidopsis thaliana (taxid: 3702) confident COG5274::CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism] 99.87::5-83 PF00173::Cyt-b5 99.93::7-81 GO:0005811::lipid particle confident hh_2ibj_A_1::3-84 very confident psy15180 131 O48845::Cytochrome b5 isoform B ::Membrane bound hemoprotein which function as an electron carrier for several membrane bound oxygenases.::Arabidopsis thaliana (taxid: 3702) confident COG5274::CYB5 Cytochrome b involved in lipid metabolism [Energy production and conversion / Lipid metabolism] 99.85::2-80 PF00173::Cyt-b5 99.92::4-78 GO:0043085::positive regulation of catalytic activity confident hh_3ner_A_1::3-83 very confident psy10678 136 Q63836::Selenium-binding protein 2 ::Selenium- and acetaminophen-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport.::Mus musculus (taxid: 10090) confident COG5276::Uncharacterized conserved protein [Function unknown] 92.14::70-117 PF05694::SBP56 100.00::12-134 GO:0005829::cytosol confident hh_2ece_A_1::12-24,26-66,68-76,78-112 very confident psy2724 174 P02572::Actin-42A ::Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.::Drosophila melanogaster (taxid: 7227) very confident COG5277::Actin and related proteins [Cytoskeleton] 100.00::3-173 PF00022::Actin 100.00::3-172 GO:0005829::cytosol very confident hh_2fxu_A_1::3-172 very confident psy429 243 P60712::Actin, cytoplasmic 1 ::Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.::Bos taurus (taxid: 9913) very confident COG5277::Actin and related proteins [Cytoskeleton] 99.95::103-240 PF00022::Actin 99.95::102-241 GO:0005829::cytosol very confident hh_2fxu_A_1::102-240 very confident psy16631 376 P61162::Alpha-centractin ::Component of a multi-subunit complex involved in microtubule based vesicle motility. It is associated with the centrosome.::Canis familiaris (taxid: 9615) very confident COG5277::Actin and related proteins [Cytoskeleton] 100.00::8-376 PF00022::Actin 100.00::8-376 GO:0005829::cytosol very confident hh_1k8k_B_1::6-96,98-373 very confident psy4565 67 Q5M7U6::Actin-related protein 2 ::Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament.::Rattus norvegicus (taxid: 10116) confident COG5277::Actin and related proteins [Cytoskeleton] 99.72::1-67 PF00022::Actin 99.75::1-66 GO:0005829::cytosol confident hh_1k8k_B_1::1-59,61-66 very confident psy4562 112 Q5M7U6::Actin-related protein 2 ::Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament.::Rattus norvegicus (taxid: 10116) confident COG5277::Actin and related proteins [Cytoskeleton] 99.76::26-109 PF00022::Actin 99.87::9-109 GO:0005829::cytosol confident hh_1k8k_B_1::9-83,85-106 very confident psy8375 105 Q9DEE9::Actin-related protein 6 ::::Gallus gallus (taxid: 9031) confident COG5277::Actin and related proteins [Cytoskeleton] 99.97::1-104 PF00022::Actin 100.00::1-104 GO:0005829::cytosol confident hh_3qb0_A_1::1-51,53-104 very confident psy2594 117 P32392::Actin-related protein 3 ::Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament.::Drosophila melanogaster (taxid: 7227) very confident COG5277::Actin and related proteins [Cytoskeleton] 99.91::2-111 PF00022::Actin 99.95::2-111 GO:0030027::lamellipodium very confident hh_1k8k_A_1::2-116 very confident psy2593 139 P32390::Actin-related protein 3 ::Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament (By similarity). May be involved in cytokinesis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5277::Actin and related proteins [Cytoskeleton] 99.50::36-94 PF00022::Actin 99.45::34-94 GO:0030479::actin cortical patch very confident hh_2fxu_A_1::35-129 very confident psy3377 336 O96019::Actin-like protein 6A ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Required for maximal ATPase activity of SMARCA4/BRG1/BAF190A and for association of the SMARCA4/BRG1/BAF190A containing remodeling complex BAF with chromatin/nuclear matrix. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and is required for the proliferation of neural progenitors. During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth (By similarity). Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene. Putative core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Homo sapiens (taxid: 9606) confident COG5277::Actin and related proteins [Cytoskeleton] 100.00::9-331 PF00022::Actin 100.00::10-329 GO:0031011::Ino80 complex confident hh_1k8k_A_1::12-53,63-86,88-88,90-173,175-228,232-241,249-259,272-281,289-333 very confident psy3521 88 O96019::Actin-like protein 6A ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Required for maximal ATPase activity of SMARCA4/BRG1/BAF190A and for association of the SMARCA4/BRG1/BAF190A containing remodeling complex BAF with chromatin/nuclear matrix. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and is required for the proliferation of neural progenitors. During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth (By similarity). Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene. Putative core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Homo sapiens (taxid: 9606) confident COG5277::Actin and related proteins [Cytoskeleton] 96.38::33-86 PF00022::Actin 98.80::26-87 GO:0031011::Ino80 complex confident hh_3qb0_A_1::15-87 confident psy7893 691 Q940Z2::Actin-related protein 5 ::Probable subunit of a chromatin-remodeling complex. Involved in DNA repair. Required for multicellular development of all organs.::Arabidopsis thaliana (taxid: 3702) confident COG5277::Actin and related proteins [Cytoskeleton] 100.00::27-659 PF00022::Actin 100.00::25-659 GO:0031011::Ino80 complex confident hh_1k8k_A_1::23-81,84-118,122-170,173-175,187-190,192-277,389-391,462-462,469-477,525-659 very confident psy2717 229 P63258::Actin, cytoplasmic 2 ::Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.::Bos taurus (taxid: 9913) very confident COG5277::Actin and related proteins [Cytoskeleton] 100.00::3-229 PF00022::Actin 100.00::2-229 GO:0032009::early phagosome very confident hh_2fxu_A_1::2-229 very confident psy2592 217 P32390::Actin-related protein 3 ::Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament (By similarity). May be involved in cytokinesis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable COG5277::Actin and related proteins [Cytoskeleton] 99.93::17-161 PF00022::Actin 99.93::19-159 GO:0032010::phagolysosome confident hh_1k8k_A_1::18-103,110-113,121-158 very confident psy430 107 P63258::Actin, cytoplasmic 2 ::Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.::Bos taurus (taxid: 9913) very confident COG5277::Actin and related proteins [Cytoskeleton] 99.95::11-107 PF00022::Actin 99.97::12-107 GO:0032010::phagolysosome very confident rp_2fxu_A_1::29-107 very confident psy9135 1107 Q3ZBD2::Actin-related protein 10 ::::Bos taurus (taxid: 9913) portable COG5277::Actin and related proteins [Cytoskeleton] 100.00::42-562 PF00022::Actin 100.00::40-558 GO:0043229::intracellular organelle confident hh_1k8k_A_2::735-855,857-889,891-906,915-919,924-946,948-955,957-974,976-1008,1010-1019,1026-1038,1040-1055,1057-1099 very confident psy15064 102 Q54GX7::Actin-10 ::Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.::Dictyostelium discoideum (taxid: 44689) confident COG5277::Actin and related proteins [Cytoskeleton] 99.85::1-81 PF00022::Actin 99.91::1-81 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_2fxu_A_1::1-34,38-81 very confident psy15183 1973 Q01780::Exosome component 10 ::Putative catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. EXOSC10 has 3'-5' exonuclease activity (By similarity). EXOSC10 is required for nucleolar localization of C1D and probably mediates the association of SKIV2L2, C1D and MPP6 wth the RNA exosome involved in the maturation of 5.8S rRNA.::Homo sapiens (taxid: 9606) portable COG5277::Actin and related proteins [Cytoskeleton] 100.00::868-1479 PF00022::Actin 100.00::866-1480 GO:0045944::positive regulation of transcription from RNA polymerase II promoter confident hh_2hbj_A_1::240-492,498-530,532-616 very confident psy6341 465 P61157::Actin-related protein 3 ::Functions as ATP-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the pointed end of the daughter actin filament. Plays a role in ciliogenesis.::Bos taurus (taxid: 9913) confident COG5277::Actin and related proteins [Cytoskeleton] 99.88::2-203 PF00022::Actin 99.92::2-203 GO:0048699::generation of neurons confident hh_1k8k_A_2::212-253,255-351,356-361,372-377,381-389 very confident psy13414 161 P63258::Actin, cytoplasmic 2 ::Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.::Bos taurus (taxid: 9913) very confident COG5277::Actin and related proteins [Cytoskeleton] 99.97::2-159 PF00022::Actin 100.00::2-159 GO:0070062::extracellular vesicular exosome very confident rp_2fxu_A_1::12-144 very confident psy9431 119 Q8NBH2::Kyphoscoliosis peptidase ::Probable cytoskeleton-associated protease required for normal muscle growth. Involved in function, maturation and stabilization of the neuromuscular junction. May act by cleaving muscle-specific proteins such as FLNC.::Homo sapiens (taxid: 9606) portable COG5279::CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning] 99.93::1-115 PF01841::Transglut_core 99.05::1-51 GO:0055120::striated muscle dense body confident hh_3isr_A_1::2-21,31-56 confident psy2861 1140 Q8NBH2::Kyphoscoliosis peptidase ::Probable cytoskeleton-associated protease required for normal muscle growth. Involved in function, maturation and stabilization of the neuromuscular junction. May act by cleaving muscle-specific proteins such as FLNC.::Homo sapiens (taxid: 9606) portable COG5279::CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning] 99.97::394-696 PF01841::Transglut_core 99.65::396-560 GO:0055120::striated muscle dense body confident hh_3kd4_A_1::389-404,406-422,427-436,465-470,488-533,535-537,539-540,542-564 confident psy11860 123 Q8C8H8::Kyphoscoliosis peptidase ::Probable cytoskeleton-associated protease required for normal muscle growth. Involved in function, maturation and stabilization of the neuromuscular junction. May act by cleaving muscle-specific proteins such as FLNC.::Mus musculus (taxid: 10090) portable COG5279::CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning] 99.74::14-119 no hit no match GO:0055120::striated muscle dense body confident no hit no match psy12365 1324 Q3UGF1::WD repeat-containing protein 19 ::May be involved in cilia function and/or assembly.::Mus musculus (taxid: 10090) confident COG5290::IkappaB kinase complex, IKAP component [Transcription] 99.71::801-1025 PF04762::IKI3 99.89::13-644 GO:0051716::cellular response to stimulus confident hh_3sf4_A_1::647-679,684-687,689-715,735-782,784-898,905-911,913-919,929-955,962-970,982-1002 confident psy4231 247 Q5R9W3::Derlin-1 ::Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome. May mediate the interaction between VCP and the degradation substrate.::Pongo abelii (taxid: 9601) very confident COG5291::Predicted membrane protein [Function unknown] 100.00::10-212 PF04511::DER1 100.00::11-204 GO:0030176::integral to endoplasmic reticulum membrane very confident hh_2nr9_A_1::9-46,48-63,68-90,94-140,142-142,147-187 confident psy11109 93 Q5RC74::Derlin-2 ::Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal glycoproteins, but not that of misfolded nonglycoproteins. May act by forming a channel that allows the retrotranslocation of misfolded glycoproteins into the cytosol where they are ubiquitinated and degraded by the proteasome. May mediate the interaction between VCP and the degradation substrate.::Pongo abelii (taxid: 9601) confident COG5291::Predicted membrane protein [Function unknown] 98.91::1-66 PF04511::DER1 99.74::1-55 GO:0030307::positive regulation of cell growth confident no hit no match psy2711 114 P07187::Larval cuticle protein 2 ::Component of the larval cuticle.::Drosophila melanogaster (taxid: 7227) portable COG5294::Uncharacterized protein conserved in bacteria [Function unknown] 93.29::39-85 PF00379::Chitin_bind_4 99.75::41-88 GO:0005615::extracellular space confident hh_1tza_A_1::60-80 portable psy14634 388 Q5RAD5::RNA polymerase-associated protein RTF1 homolog (Fragment) ::Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II and is implicated in regulation of development and maintenance of embryonic stem cell pluripotency. PAF1C associates with RNA polymerase II through interaction with POLR2A CTD non-phosphorylated and 'Ser-2'- and 'Ser-5'-phosphorylated forms and is involved in transcriptional elongation, acting both indepentently and synergistically with TCEA1 and in cooperation with the DSIF complex and HTATSF1. PAF1C is required for transcription of Hox and Wnt target genes. PAF1C is involved in hematopoiesis and stimulates transcriptional activity of MLL1. PAF1C is involved in histone modifications such as ubiquitination of histone H2B and methylation on histone H3 'Lys-4' (H3K4me3). PAF1C recruits the RNF20/40 E3 ubiquitin-protein ligase complex and the E2 enzyme UBE2A or UBE2B to chromatin which mediate monoubiquitination of 'Lys-120' of histone H2B (H2BK120ub1); UB2A/B-mediated H2B ubiquitination is proposed to be coupled to transcription. PAF1C is involved in mRNA 3' end formation probably through association with cleavage and poly(A) factors. Binds single-stranded DNA. Required for maximal induction of heat-shock genes. Required for the trimethylation of histone H3 'Lys-4' (H3K4me3) on genes involved in stem cell pluripotency; this function is synergistic with CXXC1 indicative for an involvement of a SET1 complex.::Pongo abelii (taxid: 9601) confident COG5296::Transcription factor involved in TATA site selection and in elongation by RNA polymerase II [Transcription] 100.00::92-308 PF03126::Plus-3 99.94::93-189 GO:0035327::transcriptionally active chromatin confident hh_2bze_A_1::89-211 very confident psy17456 203 P47102::ARF guanine-nucleotide exchange factor 1 ::Activates the ARF proteins by exchanging bound GDP for free GTP.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5307::SEC7 domain proteins [General function prediction only] 100.00::1-198 PF01369::Sec7 100.00::1-188 GO:0005829::cytosol confident hh_3ltl_A_1::1-57,114-116,130-197 very confident psy17823 92 P63035::Cytohesin-2 ::Acts as a guanine-nucleotide exchange factor (GEF). Promotes guanine-nucleotide exchange on ARF1, ARF3 and ARF6. Promotes the activation of ARF factors through replacement of GDP with GTP. The cell membrane form, in association with ARL4 proteins, recruits ARF6 to the plasma membrane.::Rattus norvegicus (taxid: 10116) confident COG5307::SEC7 domain proteins [General function prediction only] 99.94::4-90 PF01369::Sec7 99.96::3-90 GO:0005886::plasma membrane very confident hh_1r8s_E_1::3-17,23-90 very confident psy17822 91 P97696::Cytohesin-3 ::Promotes guanine-nucleotide exchange on ARF1. Promotes the activation of ARF through replacement of GDP with GTP.::Rattus norvegicus (taxid: 10116) confident COG5307::SEC7 domain proteins [General function prediction only] 98.60::1-82 PF01369::Sec7 99.55::2-82 GO:0005923::tight junction confident hh_1r8s_E_1::1-52,58-74,76-82 very confident psy10883 435 Q80TL7::Protein MON2 homolog ::May be required for traffic between late Golgi and early endosomes.::Mus musculus (taxid: 10090) confident COG5307::SEC7 domain proteins [General function prediction only] 98.26::240-413 PF12783::Sec7_N 100.00::211-391 GO:0005794::Golgi apparatus confident hh_2qk2_A_1::29-52,56-94,100-175 portable psy7671 115 P37199::Nuclear pore complex protein Nup155 ::Essential component of nuclear pore complex. Nucleoporins may be involved both in binding and translocating proteins during nucleocytoplasmic transport.::Rattus norvegicus (taxid: 10116) portable COG5308::NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion] 99.91::2-108 PF08801::Nucleoporin_N 99.74::2-92 GO:0005643::nuclear pore confident hh_4a11_B_2::52-85 portable psy3554 672 Q08DB5::Syntaxin-5 ::Mediates endoplasmic reticulum to Golgi transport.::Bos taurus (taxid: 9913) confident COG5325::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 99.84::95-365 PF05739::SNARE 99.28::305-365 GO:0005794::Golgi apparatus confident hh_2nps_B_1::304-365 very confident psy7549 104 O15155::BET1 homolog ::Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE involved in the docking process of ER-derived vesicles with the cis-Golgi membrane.::Homo sapiens (taxid: 9606) confident COG5325::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 91.64::23-85 PF05739::SNARE 99.41::26-88 GO:0016021::integral to membrane confident hh_1gl2_D_1::22-26,28-57,59-86 very confident psy7328 159 Q9UNK0::Syntaxin-8 ::Vesicle trafficking protein that functions in the early secretory pathway, possibly by mediating retrograde transport from cis-Golgi membranes to the ER.::Homo sapiens (taxid: 9606) portable COG5325::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 99.29::67-158 PF05739::SNARE 99.51::76-137 GO:0031902::late endosome membrane confident hh_1gl2_D_1::72-135 very confident psy15562 318 Q63635::Syntaxin-6 ::Involved in intracellular vesicle trafficking.::Rattus norvegicus (taxid: 10116) confident COG5325::t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] 96.98::186-306 PF09177::Syntaxin-6_N 99.61::1-85 GO:0031201::SNARE complex confident hh_4dnd_A_1::1-24,27-70,75-85 very confident psy3177 425 O43426::Synaptojanin-1 ::Inositol 5-phosphatase which has a role in clathrin-mediated endocytosis.::Homo sapiens (taxid: 9606) confident COG5329::Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms] 100.00::22-422 PF02383::Syja_N 100.00::24-398 GO:0005829::cytosol confident hh_3lwt_X_1::16-36,41-97,104-209,271-272,287-312,314-319,323-349,355-376,378-418 very confident psy3260 100 O43426::Synaptojanin-1 ::Inositol 5-phosphatase which has a role in clathrin-mediated endocytosis.::Homo sapiens (taxid: 9606) confident COG5329::Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms] 100.00::15-99 PF02383::Syja_N 100.00::2-97 GO:0043195::terminal bouton confident hh_3lwt_X_1::2-98 very confident psy8439 671 Q9ES21::Phosphatidylinositide phosphatase SAC1 ::Phosphoinositide phosphatase that hydrolyzes PtdIns(3)P and PtdIns(4)P. Has low activity towards PtdIns(3,5)P2.::Rattus norvegicus (taxid: 10116) confident COG5329::Phosphoinositide polyphosphatase (Sac family) [Signal transduction mechanisms] 100.00::19-409 PF02383::Syja_N 100.00::14-255 GO:0071683::sensory dendrite confident hh_3lwt_X_1::14-56,61-183,186-402 very confident psy2416 405 Q96S94::Cyclin-L2 ::Transcriptional regulator which participates in regulating the pre-mRNA splicing process. Also modulates the expression of critical apoptotic factor, leading to cell apoptosis.::Homo sapiens (taxid: 9606) confident COG5333::CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] 99.97::43-230 PF00134::Cyclin_N 99.72::46-166 GO:0000079::regulation of cyclin-dependent protein serine/threonine kinase activity confident hh_3rgf_B_1::21-130,136-184,187-229,233-261 very confident psy4747 414 O88874::Cyclin-K ::May play a role in transcriptional regulation. It is associated with an in vitro kinase activity toward both RNA polymerase II C-terminal domain and CDK2 (CAK).::Mus musculus (taxid: 10090) confident COG5333::CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] 99.96::60-241 PF00134::Cyclin_N 99.72::63-175 GO:0004693::cyclin-dependent protein serine/threonine kinase activity confident hh_2i53_A_1::39-248,250-283 very confident psy7372 352 Q61458::Cyclin-H ::Regulates CDK7, the catalytic subunit of the CDK-activating kinase (CAK) enzymatic complex. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Involved in cell cycle control and in RNA transcription by RNA polymerase II. Its expression and activity are constant throughout the cell cycle.::Mus musculus (taxid: 10090) confident COG5333::CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] 100.00::71-246 PF00134::Cyclin_N 99.59::76-179 GO:0004693::cyclin-dependent protein serine/threonine kinase activity very confident hh_1jkw_A_1::26-278,280-313,317-335 very confident psy11273 730 Q9FKE6::Cyclin-T1-5 ::::Arabidopsis thaliana (taxid: 3702) portable COG5333::CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] 99.95::32-216 PF00134::Cyclin_N 99.60::35-152 GO:0005634::nucleus confident hh_2ivx_A_1::12-257,259-266 very confident psy14705 329 Q9ESJ1::CDK5 and ABL1 enzyme substrate 1 ::Cyclin-dependent kinase binding protein. Enhances cyclin-dependent kinase tyrosine phosphorylation by nonreceptor tyrosine kinases, such as that of CDK5 by activated ABL1, which leads to increased CDK5 activity and is critical for neuronal development, and that of CDK2 by WEE1, which leads to decreased CDK2 activity and growth inhibition. Positively affects neuronal outgrowth. Plays a role as a regulator for p53/p73-induced cell death.::Mus musculus (taxid: 10090) confident COG5333::CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] 99.37::156-308 PF00134::Cyclin_N 99.49::135-261 GO:0005829::cytosol confident hh_3rgf_B_1::156-175,178-277,282-307 confident psy1168 229 Q29AI1::Cyclin-C ::Component of the Mediator complex, a coactivator involved in regulated gene transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Binds to and activates cyclin-dependent kinase Cdk8 that phosphorylates the CTD (C-terminal domain) of the large subunit of RNA polymerase II (RNAp II), which may inhibit the formation of a transcription initiation complex.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident COG5333::CCL1 Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit [Cell division and chromosome partitioning / Transcription / DNA replication, recombination, and repair] 100.00::36-216 PF00134::Cyclin_N 99.74::41-155 GO:0016592::mediator complex very confident hh_3rgf_B_1::5-216 very confident psy9639 321 O75689::Arf-GAP with dual PH domain-containing protein 1 ::GTPase-activating protein for the ADP ribosylation factor family (Probable). Binds phosphatidylinositol 3,4,5-trisphosphate (PtdInsP3) and inositol 1,3,4,5-tetrakisphosphate (InsP4).::Homo sapiens (taxid: 9606) confident COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 95.07::1-50 PF00169::PH 99.73::179-279 GO:0005829::cytosol confident hh_3lju_X_1::1-259,292-320 very confident psy2207 305 Q6ZV73::FYVE, RhoGEF and PH domain-containing protein 6 ::May activate CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. May play a role in regulating the actin cytoskeleton and cell shape.::Homo sapiens (taxid: 9606) portable COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 94.56::81-123 PF01363::FYVE 99.76::76-140 GO:0015629::actin cytoskeleton confident hh_3mpx_A_1::1-58,61-141 very confident psy5674 145 Q91VZ6::Stromal membrane-associated protein 1 ::GTPase activating protein that acts on ARF6. Plays a role in clathrin-dependent endocytosis. May play a role in erythropoiesis.::Mus musculus (taxid: 10090) confident COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 100.00::18-135 PF01412::ArfGap 100.00::19-131 GO:0005829::cytosol confident hh_2crr_A_1::8-136 very confident psy13622 143 Q9JLQ2::ARF GTPase-activating protein GIT2 ::GTPase-activating protein for the ADP ribosylation factor family.::Mus musculus (taxid: 10090) confident COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 100.00::1-104 PF01412::ArfGap 100.00::1-104 GO:0005829::cytosol confident hh_1dcq_A_1::1-72,74-84,86-140 very confident psy6973 115 Q9UPQ3::Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 ::GTPase-activating protein for ARF1 and, to a lesser extent, ARF5. Directly and specifically regulates the adapter protein 3 (AP-3)-dependent trafficking of proteins in the endosomal-lysosomal system.::Homo sapiens (taxid: 9606) confident COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 99.97::17-100 PF01412::ArfGap 99.96::21-99 GO:0005829::cytosol confident hh_2b0o_E_1::17-28,30-97 very confident psy7550 144 Q9FIQ0::Probable ADP-ribosylation factor GTPase-activating protein AGD9 ::GTPase-activating protein (GAP) for ADP ribosylation factor (ARF).::Arabidopsis thaliana (taxid: 3702) confident COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 100.00::8-127 PF01412::ArfGap 100.00::13-118 GO:0005912::adherens junction confident hh_2crw_A_1::3-140 very confident psy62 262 P35197::ADP-ribosylation factor GTPase-activating protein GCS1 ::GTPase-activating protein (GAP) for ARF1 and ARF2. Involved in intracellular vesicular transport. Required for transport from the trans-Golgi network. Implicated in the regulation of retrograde transport from the Golgi to the ER and in actin cytoskeletal organization. May be involved in the maintenance of mitochondrial morphology, possibly through organizing the actin cytoskeleton in Saccharomyces.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 100.00::1-104 PF01412::ArfGap 99.98::1-107 GO:0008270::zinc ion binding confident hh_3dwd_A_1::1-108 very confident psy7092 540 P38682::ADP-ribosylation factor GTPase-activating protein GLO3 ::GTPase-activating protein for the ADP ribosylation factor (ARF) family. Involved in retrograde vesicular transport from the Golgi to the endoplasmic reticulum.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 99.97::25-186 PF01412::ArfGap 99.97::28-172 GO:0008270::zinc ion binding confident hh_3dwd_A_1::22-86,88-105,152-185 very confident psy17773 165 Q8CGU4::Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 ::GTPase-activating protein (GAP) for ARF1 and ARF5, which also shows strong GTPase activity. Participates in the prevention of neuronal apoptosis by enhancing PI3 kinase activity. Aids the coupling of metabotropic glutamate receptor 1 (GRM1) to cytoplasmic PI3 kinase by interacting with Homer scaffolding proteins, and also seems to mediate anti-apoptotic effects of NGF by activating nuclear PI3 kinase.::Rattus norvegicus (taxid: 10116) confident COG5347::GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion] 100.00::64-151 PF01412::ArfGap 100.00::63-148 GO:0051286::cell tip confident hh_2olm_A_1::62-70,72-111,113-131,133-156 very confident psy5876 143 A7MB16::Eukaryotic translation initiation factor 3 subunit B ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S preinitiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of posttermination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation.::Bos taurus (taxid: 9913) confident COG5354::Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] 99.54::1-134 PF08662::eIF2A 99.84::1-86 GO:0043229::intracellular organelle confident hh_1pgu_A_1::1-14,17-56,63-95,97-107 confident psy12048 267 Q8CHP5::Partner of Y14 and mago ::Key regulator of the exon junction complex (EJC), a multiprotein complex that associates immediately upstream of the exon-exon junction on mRNAs and serves as a positional landmarks for the intron exon structure of genes and directs post-transcriptional processes in the cytoplasm such as mRNA export, nonsense-mediated mRNA decay (NMD) or translation. Acts as a EJC disassembly factor, allowing translation-dependent EJC removal and recycling by disrupting mature EJC from spliced mRNAs. Its association with the 40S ribosomal subunit probably prevents a translation-independent disassembly of the EJC from spliced mRNAs, by restricting its activity to mRNAs that have been translated. Interferes with NMD and enhances translation of spliced mRNAs, probably by antagonizing EJC functions.::Mus musculus (taxid: 10090) portable COG5354::Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] 97.12::199-248 PF09282::Mago-bind 99.53::2-27 GO:0045727::positive regulation of translation confident hh_1rk8_C_1::2-46,49-51 very confident psy114 609 O75051::Plexin-A2 ::Coreceptor for SEMA3A and SEMA6A. Necessary for signaling by SEMA6A and class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance, invasive growth and cell migration. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for specific semaphorins, and its cytoplasmic domain is required for the activation of down-stream signaling events in the cytoplasm.::Homo sapiens (taxid: 9606) portable COG5374::Uncharacterized conserved protein [Function unknown] 99.96::1-158 PF05529::Bap31 100.00::1-157 GO:0044699::single-organism process confident hh_3oky_A_1::157-166,169-169,177-184,186-222,226-307,309-315 very confident psy4010 1527 P48548::G protein-activated inward rectifier potassium channel 4 ::This potassium channel is controlled by G proteins. Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into the cell rather than out of it. Their voltage dependence is regulated by the concentration of extracellular potassium; as external potassium is raised, the voltage range of the channel opening shifts to more positive voltages. The inward rectification is mainly due to the blockage of outward current by internal magnesium. Can be blocked by external barium.::Rattus norvegicus (taxid: 10116) portable COG5383::Uncharacterized protein conserved in bacteria [Function unknown] 100.00::1105-1523 PF01007::IRK 100.00::108-540 GO:0043234::protein complex confident hh_2rjb_A_1::1108-1280,1288-1334,1338-1338,1387-1388,1414-1415,1432-1432,1443-1522 very confident psy998 380 Q9VFB2::28S ribosomal protein S10, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident COG5387::Chaperone required for the assembly of the mitochondrial F1-ATPase [Posttranslational modification, protein turnover, chaperones] 100.00::195-361 PF00338::Ribosomal_S10 99.94::50-150 GO:0005739::mitochondrion confident hh_2r6i_A_1::193-364 very confident psy1002 136 Q8N5M1::ATP synthase mitochondrial F1 complex assembly factor 2 ::May play a role in the assembly of the F1 component of the mitochondrial ATP synthase (ATPase).::Homo sapiens (taxid: 9606) confident COG5387::Chaperone required for the assembly of the mitochondrial F1-ATPase [Posttranslational modification, protein turnover, chaperones] 100.00::4-131 PF07542::ATP12 100.00::30-131 GO:0016607::nuclear speck confident hh_2r6i_A_1::27-104,106-131 very confident psy10869 163 O70493::Sorting nexin-12 ::May be involved in several stages of intracellular trafficking.::Mus musculus (taxid: 10090) very confident COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 99.57::18-140 PF00787::PX 99.86::29-149 GO:0005769::early endosome very confident hh_2csk_A_1::23-163 very confident psy8595 128 Q5RID7::Sorting nexin-17 ::May be involved in several stages of intracellular protein trafficking. Plays a role in the sorting of endocytosed cell surface receptors. Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)).::Danio rerio (taxid: 7955) confident COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 99.33::3-98 PF00787::PX 99.86::2-107 GO:0005829::cytosol confident hh_3lui_A_1::1-86,92-110 very confident psy12925 83 Q91YJ2::Sorting nexin-4 ::May be involved in several stages of intracellular trafficking. Plays a role in recycling endocytosed transferrin receptor and prevent its degradation.::Mus musculus (taxid: 10090) confident COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 99.50::8-83 PF00787::PX 99.57::17-83 GO:0005868::cytoplasmic dynein complex confident hh_3iq2_A_1::9-56,63-83 very confident psy17232 313 Q5R613::Sorting nexin-6 ::May be involved in several stages of intracellular trafficking. Plays a role in retrograde protein transport from endosomes to the trans-Golgi network. May function as link between transport vesicles and dynactin. Negatively regulates retrograde transport of BACE1 from the cell surface to the trans-Golgi network. Promotes lysosomal degradation of CDKN1B. May contribute to transcription regulation.::Pongo abelii (taxid: 9601) confident COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 99.74::30-163 PF00787::PX 99.72::31-172 GO:0030512::negative regulation of transforming growth factor beta receptor signaling pathway confident hh_3hpc_X_1::24-182 very confident psy9741 199 Q80TM9::Nischarin ::Acts either as the functional imidazoline-1 receptor (I1R) candidate or as a membrane-associated mediator of the I1R signaling. Binds numerous imidazoline ligands that induces initiation of cell-signaling cascades triggering to cell survival, growth and migration. Its activation by the agonist rilmenidine induces an increase in phosphorylation of mitogen-activated protein kinases MAPK1 and MAPK3 in rostral ventrolateral medulla (RVLM) neurons that exhibited rilmenidine-evoked hypotension (By similarity). Blocking its activation with efaroxan abolished rilmenidine-induced mitogen-activated protein kinase phosphorylation in RVLM neurons (By similarity). Acts as a modulator of Rac-regulated signal transduction pathways. Suppresses Rac1-stimulated cell migration by interacting with PAK1 and inhibiting its kinase activity. Also blocks Pak-independent Rac signaling by interacting with RAC1 and inhibiting Rac1-stimulated NF-kB response element and cyclin D1 promoter activation. Inhibits also LIMK1 kinase activity by reducing LIMK1 'Tyr-508' phosphorylation. Inhibits Rac-induced cell migration and invasion in breast and colon epithelial cells. Inhibits lamellipodia formation, when overexpressed. Plays a role in protection against apoptosis (By similarity). Involved in association with IRS4 in the enhancement of insulin activation of MAPK1 and MAPK3 (By similarity). When overexpressed, induces a redistribution of cell surface ITGA5 integrin to intracellular endosomal structures.::Mus musculus (taxid: 10090) portable COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 98.92::52-130 PF00787::PX 99.81::39-140 GO:0048519::negative regulation of biological process confident hh_3p0c_A_1::39-147 very confident psy18202 357 Q5VWJ9::Sorting nexin-30 ::May be involved in several stages of intracellular trafficking.::Homo sapiens (taxid: 9606) confident COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 99.95::1-354 PF09325::Vps5 100.00::100-356 GO:0005829::cytosol confident hh_3dyt_A_1::6-42,47-107,112-114,118-200,202-242,254-258,261-263,284-285,300-355 very confident psy8611 280 Q9CWK8::Sorting nexin-2 ::May be involved in several stages of intracellular trafficking. Component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network. Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)) or phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Mus musculus (taxid: 10090) portable COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 98.56::190-274 PF09325::Vps5 100.00::3-272 GO:0035091::phosphatidylinositol binding confident hh_4akv_A_1::7-123,134-139,141-150,156-157,210-256,262-274 confident psy17920 393 Q9Y5X1::Sorting nexin-9 ::May be involved in several stages of intracellular trafficking. Plays a role in endocytosis via clathrin-coated pits, but also clathrin-independent, actin-dependent fluid-phase endocytosis. Plays a role in macropinocytosis. Promotes internalization of TNFR. Promotes degradation of EGFR after EGF signaling. Stimulates the GTPase activity of DNM1. Promotes DNM1 oligomerization. Promotes activation of the Arp2/3 complex by WASL, and thereby plays a role in the reorganization of the F-actin cytoskeleton. Binds to membranes enriched in phosphatidylinositol 4,5-bisphosphate and promotes membrane tubulation. Has lower affinity for membranes enriched in phosphatidylinositol 3-phosphate.::Homo sapiens (taxid: 9606) portable COG5391::Phox homology (PX) domain protein [Intracellular trafficking and secretion / General function prediction only] 99.69::274-335 PF10456::BAR_3_WASP_bdg 100.00::115-393 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_3dyt_A_1::11-36,42-335 very confident psy4643 207 O78497::Heme oxygenase ::Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae.::Guillardia theta (taxid: 55529) confident COG5398::Heme oxygenase [Inorganic ion transport and metabolism] 100.00::7-207 PF01126::Heme_oxygenase 100.00::8-193 GO:0042221::response to chemical stimulus confident hh_2q32_A_1::7-70,81-164,167-200 very confident psy9775 133 Q920B9::FACT complex subunit SPT16 ::Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II. The FACT complex is probably also involved in phosphorylation of 'Ser-392' of p53/TP53 via its association with CK2 (casein kinase II). Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene.::Mus musculus (taxid: 10090) confident COG5406::Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] 100.00::2-121 PF08512::Rtt106 99.95::29-118 GO:0003682::chromatin binding confident hh_2gcl_A_1::37-51,53-86,88-116 confident psy16786 211 Q920B9::FACT complex subunit SPT16 ::Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of the nucleosome following the passage of RNA polymerase II. The FACT complex is probably also involved in phosphorylation of 'Ser-392' of p53/TP53 via its association with CK2 (casein kinase II). Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene.::Mus musculus (taxid: 10090) confident COG5406::Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics] 100.00::59-211 PF08644::SPT16 99.97::58-158 GO:0003682::chromatin binding confident bp_4ioy_X_1::130-210 portable psy12216 646 Q8VHE0::Translocation protein SEC63 homolog ::Required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane.::Mus musculus (taxid: 10090) portable COG5407::SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] 100.00::1-387 PF02889::Sec63 100.00::63-388 GO:0045169::fusome confident hh_2q0z_X_1::59-70,77-90,93-115,121-144,149-173,175-204,217-256,259-281,283-305,308-312,316-335,364-388 very confident psy12224 904 Q8VHE0::Translocation protein SEC63 homolog ::Required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane.::Mus musculus (taxid: 10090) confident COG5407::SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] 100.00::7-631 PF02889::Sec63 100.00::123-626 GO:0045169::fusome confident hh_3im1_A_1::122-131,134-157,163-186,190-216,218-245,253-253,259-260,262-297,300-323,325-346,349-354,358-377,428-428,475-475,547-580,583-599,601-629 very confident psy1802 325 Q9Z0U0::Xenotropic and polytropic retrovirus receptor 1 ::May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.::Mus musculus (taxid: 10090) confident COG5409::EXS domain-containing protein [Signal transduction mechanisms] 100.00::17-322 PF03124::EXS 100.00::18-324 GO:0004872::receptor activity confident no hit no match psy12163 88 Q9Z0U0::Xenotropic and polytropic retrovirus receptor 1 ::May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.::Mus musculus (taxid: 10090) confident COG5409::EXS domain-containing protein [Signal transduction mechanisms] 99.59::5-88 PF03124::EXS 99.93::5-88 GO:0004872::receptor activity confident no hit no match psy7158 402 Q9Z0U0::Xenotropic and polytropic retrovirus receptor 1 ::May function in G-protein coupled signal transduction (By similarity). Potential receptor for xenotropic and polytropic murine leukemia retroviruses.::Mus musculus (taxid: 10090) confident COG5409::EXS domain-containing protein [Signal transduction mechanisms] 99.95::131-386 PF03124::EXS 100.00::163-391 GO:0004872::receptor activity confident rp_1vt4_I_1::76-130,132-136,140-175,182-183,186-187,193-199,202-286,288-291,302-305,307-312,323-368,370-374,377-396 portable psy3271 781 Q01968::Inositol polyphosphate 5-phosphatase OCRL-1 ::Converts phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 4-phosphate. Also converts inositol 1,4,5-trisphosphate to inositol 1,4-bisphosphate and inositol 1,3,4,5-tetrakisphosphate to inositol 1,3,4-trisphosphate. May function in lysosomal membrane trafficking by regulating the specific pool of phosphatidylinositol 4,5-bisphosphate that is associated with lysosomes. Involved in primary cilia assembly.::Homo sapiens (taxid: 9606) portable COG5411::Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] 100.00::1-429 PF00620::RhoGAP 99.93::600-739 GO:0043229::intracellular organelle confident hh_3mtc_A_1::1-95,133-304,388-417 very confident psy3197 459 Q9WVR1::72 kDa inositol polyphosphate 5-phosphatase ::Converts phosphatidylinositol 3,4,5-trisphosphate (PtdIns 3,4,5-P3) to PtdIns-P2. Can convert lipid substrates, but also water soluble inositol phosphates.::Rattus norvegicus (taxid: 10116) portable COG5411::Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] 100.00::184-450 PF03372::Exo_endo_phos 98.11::198-349 GO:0005737::cytoplasm confident hh_2xsw_A_1::198-365,371-449 very confident psy3175 151 O43426::Synaptojanin-1 ::Inositol 5-phosphatase which has a role in clathrin-mediated endocytosis.::Homo sapiens (taxid: 9606) confident COG5411::Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] 100.00::3-150 PF03372::Exo_endo_phos 97.26::3-54 GO:0005829::cytosol confident hh_3mtc_A_1::3-126,131-151 very confident psy11370 208 Q12271::Polyphosphatidylinositol phosphatase INP53 ::Dephosphorylates a number of phosphatidylinositols (PIs) like phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2), but also phosphatidylinositol 3-phosphate (PtdIns(3)P), phosphatidylinositol 4-phosphate (PtdIns(4)P), and phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Controls the cellular levels and subcellular distribution of phosphatidylinositol 3-phosphate and phosphatidylinositol 4,5-bisphosphate. Plays an essential role in a TGN (trans Golgi network)-to-early endosome pathway. Involved in clathrin-mediated protein sorting at the TGN.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5411::Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] 100.00::23-207 PF03372::Exo_endo_phos 98.60::92-192 GO:0005829::cytosol confident hh_2xsw_A_1::18-46,48-52,64-77,81-192,194-205 very confident psy5023 82 Q92835::Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 ::Phosphatidylinositol (PtdIns) phosphatase that specifically hydrolyzes the 5-phosphate of phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4,5)P3) to produce PtdIns(3,4)P2, thereby negatively regulating the PI3K (phosphoinositide 3-kinase) pathways. Acts as a negative regulator of B-cell antigen receptor signaling. Mediates signaling from the FC-gamma-RIIB receptor (FCGR2B), playing a central role in terminating signal transduction from activating immune/hematopoietic cell receptor systems. Acts as a negative regulator of myeloid cell proliferation/survival and chemotaxis, mast cell degranulation, immune cells homeostasis, integrin alpha-IIb/beta-3 signaling in platelets and JNK signaling in B-cells. Regulates proliferation of osteoclast precursors, macrophage programming, phagocytosis and activation and is required for endotoxin tolerance. Involved in the control of cell-cell junctions, CD32a signaling in neutrophils and modulation of EGF-induced phospholipase C activity. Key regulator of neutrophil migration, by governing the formation of the leading edge and polarization required for chemotaxis. Modulates FCGR3/CD16-mediated cytotoxicity in NK cells. Mediates the activin/TGF-beta-induced apoptosis through its Smad-dependent expression. May also hydrolyze PtdIns(1,3,4,5)P4, and could thus affect the levels of the higher inositol polyphosphates like InsP6.::Homo sapiens (taxid: 9606) portable COG5411::Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms] 99.92::1-82 no hit no match GO:0031090::organelle membrane confident hh_3mtc_A_1::1-19,23-81 very confident psy2972 143 Q8VIK1::U11/U12 small nuclear ribonucleoprotein 25 kDa protein ::::Mus musculus (taxid: 10090) confident COG5417::Uncharacterized small protein [Function unknown] 96.37::47-131 PF00240::ubiquitin 99.49::54-137 GO:0005689::U12-type spliceosomal complex confident hh_1v2y_A_1::44-63,65-142 very confident psy11489 433 Q8R317::Ubiquilin-1 ::Links CD47 to the cytoskeleton. Promotes the surface expression of GABA-A receptors. Promotes the accumulation of uncleaved PSEN1 and PSEN2 by stimulating their biosynthesis. Has no effect on PSEN1 and PSEN2 degradation.::Mus musculus (taxid: 10090) confident COG5417::Uncharacterized small protein [Function unknown] 96.78::12-78 PF00240::ubiquitin 99.54::18-78 GO:0005829::cytosol confident hh_1j8c_A_1::10-78 very confident psy4181 73 Q9V998::Ubiquitin-like protein 5 ::::Drosophila melanogaster (taxid: 7227) very confident COG5417::Uncharacterized small protein [Function unknown] 97.13::5-70 PF00240::ubiquitin 99.92::7-73 GO:0005829::cytosol very confident hh_1uh6_A_1::1-73 very confident psy4259 203 Q84L31::Putative DNA repair protein RAD23-3 ::May be involved in nucleotide excision repair.::Arabidopsis thaliana (taxid: 3702) portable COG5417::Uncharacterized small protein [Function unknown] 97.34::8-77 PF09280::XPC-binding 99.80::135-193 GO:0071942::XPC complex confident hh_1oqy_A_1::6-41,44-193 very confident psy5872 91 O95164::Ubiquitin-like protein 3 ::::Homo sapiens (taxid: 9606) very confident COG5417::Uncharacterized small protein [Function unknown] 97.00::1-74 PF13881::Rad60-SLD_2 99.96::1-90 GO:0005622::intracellular very confident hh_2gow_A_1::1-39,41-90 very confident psy4663 966 P26675::Protein son of sevenless ::Promotes the exchange of Ras-bound GDP by GTP. Functions in signaling pathways initiated by the sevenless and epidermal growth factor receptor tyrosine kinases; implies a role for the ras pathway in neuronal development.::Drosophila melanogaster (taxid: 7227) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 98.28::5-224 PF00617::RasGEF 100.00::440-626 GO:0019222::regulation of metabolic process confident hh_2ii0_A_1::241-693,695-711 very confident psy2540 58 Q96PE2::Rho guanine nucleotide exchange factor 17 ::Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPases.::Homo sapiens (taxid: 9606) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 98.68::3-57 PF00621::RhoGEF 99.69::2-58 GO:0002121::inter-male aggressive behavior confident hh_1kz7_A_1::2-33,35-58 very confident psy5772 654 Q5RDX5::Ephexin-1 ::Acts as a guanine nucleotide exchange factor (GEF) which differentially activates the GTPases RHOA, RAC1 and CDC42. Plays a role in axon guidance regulating ephrin-induced growth cone collapse and dendritic spine morphogenesis. Upon activation by ephrin through EPHA4, the GEF activity switches toward RHOA resulting in its activation. Activated RHOA promotes cone retraction at the expense of RAC1- and CDC42-stimulated growth cone extension.::Pongo abelii (taxid: 9601) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.94::362-653 PF00621::RhoGEF 99.96::392-574 GO:0005737::cytoplasm confident hh_3odw_A_1::361-370,374-416,419-474,476-550,552-621,630-635,640-653 very confident psy5779 83 Q8BWA8::Rho guanine nucleotide exchange factor 19 ::Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPase.::Mus musculus (taxid: 10090) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.41::1-83 PF00621::RhoGEF 99.24::12-79 GO:0005737::cytoplasm confident hh_1kz7_A_1::2-37,40-78 very confident psy11457 315 Q8R4H2::Rho guanine nucleotide exchange factor 12 ::May play a role in the regulation of RhoA GTPase by guanine nucleotide-binding alpha-12 (GNA12) and alpha-13 (GNA13). Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPase and may act as GTPase-activating protein (GAP) for GNA12 and GNA13.::Mus musculus (taxid: 10090) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.86::1-228 PF00621::RhoGEF 99.89::1-138 GO:0005737::cytoplasm confident hh_3odw_A_1::1-114,116-193,196-233,236-241,258-263,271-274,280-315 very confident psy11458 159 Q8R4H2::Rho guanine nucleotide exchange factor 12 ::May play a role in the regulation of RhoA GTPase by guanine nucleotide-binding alpha-12 (GNA12) and alpha-13 (GNA13). Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPase and may act as GTPase-activating protein (GAP) for GNA12 and GNA13.::Mus musculus (taxid: 10090) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 98.58::26-157 PF00621::RhoGEF 99.70::40-146 GO:0005737::cytoplasm confident hh_1xcg_A_1::40-129,131-146 very confident psy2293 832 Q9H8V3::Protein ECT2 ::Guanine nucleotide exchange factor (GEF) that catalyzes the exchange of GDP for GTP. Promotes guanine nucleotide exchange on the Rho family members of small GTPases, like RHOA, RHOC, RAC1 and CDC42. Required for signal transduction pathways involved in the regulation of cytokinesis. Component of the centralspindlin complex that serves as a microtubule-dependent and Rho-mediated signaling required for the myosin contractile ring formation during the cell cycle cytokinesis. Regulates the translocation of RHOA from the central spindle to the equatorial region. Plays a role in the control of mitotic spindle assembly; regulates the activation of CDC42 in metaphase for the process of spindle fibers attachment to kinetochores before chromosome congression. Involved in the regulation of epithelial cell polarity; participates in the formation of epithelial tight junctions in a polarity complex PARD3-PARD6-protein kinase PRKCQ-dependent manner. Plays a role in the regulation of neurite outgrowth. Inhibits phenobarbital (PB)-induced NR1I3 nuclear translocation. Stimulates the activity of RAC1 through its association with the oncogenic PARD6A-PRKCI complex in cancer cells, thereby acting to coordinately drive tumor cell proliferation and invasion. Also stimulates genotoxic stress-induced RHOB activity in breast cancer cells leading to their cell death.::Homo sapiens (taxid: 9606) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 100.00::334-765 PF00621::RhoGEF 99.96::405-594 GO:0005737::cytoplasm confident hh_1kz7_A_1::394-436,439-474,478-492,494-516,521-528,535-535,537-570,572-598,610-623,625-668,688-704,706-711,716-729,734-743,745-764 very confident psy10809 136 A2CEA7::Ras-specific guanine nucleotide-releasing factor 2 ::Functions as a calcium-regulated nucleotide exchange factor activating both Ras and rac1 through the exchange of bound GDP for GTP. May function in synaptic plasticity.::Danio rerio (taxid: 7955) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.51::2-135 PF00621::RhoGEF 99.88::3-101 GO:0005829::cytosol confident hh_2dfk_A_1::2-136 very confident psy10819 173 P28818::Ras-specific guanine nucleotide-releasing factor 1 ::Promotes the exchange of Ras-bound GDP by GTP.::Rattus norvegicus (taxid: 10116) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.67::2-172 PF00621::RhoGEF 99.96::1-172 GO:0005829::cytosol confident hh_3jv3_A_1::1-26,32-71,92-172 very confident psy480 283 Q5R5M3::Rho guanine nucleotide exchange factor 10-like protein ::Acts as guanine nucleotide exchange factor (GEF) for RHOA, RHOB and RHOC.::Pongo abelii (taxid: 9601) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.65::14-261 PF00621::RhoGEF 99.89::10-217 GO:0005829::cytosol confident hh_2dfk_A_1::12-28,30-62,91-113,115-129,160-240,242-277 very confident psy13048 188 P97924::Kalirin ::Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity. Isoforms 1 and 7 are necessary for neuronal development and axonal outgrowth. Isoform 6 is required for dendritic spine formation.::Rattus norvegicus (taxid: 10116) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 98.07::59-149 PF00621::RhoGEF 99.50::61-148 GO:0005886::plasma membrane confident hh_1nty_A_1::59-157,159-187 very confident psy7075 135 Q15811::Intersectin-1 ::Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles. Isoform 1 could be involved in brain-specific synaptic vesicle recycling. Inhibits ARHGAP31 activity toward RAC1.::Homo sapiens (taxid: 9606) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.54::2-135 PF00621::RhoGEF 99.91::2-134 GO:0005886::plasma membrane confident hh_3jv3_A_1::2-135 very confident psy824 518 Q5DU57::Spermatogenesis-associated protein 13 ::Acts as guanine nucleotide exchange factor (GEF) for RHOA, RAC1 and CDC42 GTPases. Regulates cell migration and adhesion assembly and disassembly through a RAC1, PI3K, RHOA and AKT1-dependent mechanism. Increases both RAC1 and CDC42 activity, but decreases the amount of active RHOA (By similarity). Required for MMP9 up-regulation via the JNK signaling pathway in colorectal tumor cells. Involved in tumor angiogenesis and may play a role in intestinal adenoma formation and tumor progression.::Mus musculus (taxid: 10090) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.94::221-515 PF00621::RhoGEF 99.95::234-421 GO:0005938::cell cortex confident hh_2pz1_A_1::138-215,219-320,330-368,370-515 very confident psy1488 630 Q9TW28::Myosin-M heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in macropinocytosis and remodeling of actin cytoskeleton.::Dictyostelium discoideum (taxid: 44689) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.95::260-600 PF00621::RhoGEF 99.96::273-452 GO:0032587::ruffle membrane confident hh_2dfk_A_1::233-624 very confident psy9950 732 Q96PX9::Pleckstrin homology domain-containing family G member 4B ::::Homo sapiens (taxid: 9606) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.86::294-592 PF00621::RhoGEF 99.92::303-471 GO:0048731::system development confident hh_1kz7_A_1::293-564,567-602 very confident psy17417 87 O60229::Kalirin ::Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity.::Homo sapiens (taxid: 9606) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 99.21::2-86 PF00621::RhoGEF 99.61::1-86 GO:0050773::regulation of dendrite development confident hh_1nty_A_1::1-87 very confident psy3725 760 Q3UU96::Serine/threonine-protein kinase MRCK alpha ::Serine/threonine-protein kinase which is an important downstream effector of CDC42 and plays a role in the regulation of cytoskeleton reorganization and cell migration. Regulates actin cytoskeletal reorganization via phosphorylation of PPP1R12C and MYL9/MLC2. In concert with MYO18A and LRP35A, is involved in modulating lamellar actomyosin retrograde flow that is crucial to cell protrusion and migration. Phosphorylates: PPP1R12A, LIMK1 and LIMK2. May play a role in TFRC-mediated iron uptake.::Mus musculus (taxid: 10090) portable COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 100.00::372-690 PF00780::CNH 100.00::427-691 GO:0004672::protein kinase activity confident hh_2rov_A_1::281-323,328-334,336-372,374-397 very confident psy15182 366 F1LP90::Misshapen-like kinase 1 ::Serine/threonine kinase which acts as a negative regulator ofRas-related Rap2-mediated signal transduction to control neuronal structure and AMPA receptor trafficking. Required for normal synaptic density, dendrite complexity, as well as surface AMPA receptor expression in hippocampal neurons. Can activate the JNK and MAPK14/p38 pathways and mediates stimulation of the stress-activated protein kinase MAPK14/p38 MAPK downstream of the Raf/ERK pathway. Phosphorylates: TANC1 upon stimulation by RAP2A, MBP and SMAD1. Has an essential function in negative selection of thymocytes, perhaps by coupling NCK1 to activation of JNK1.::Rattus norvegicus (taxid: 10116) confident COG5422::ROM1 RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases [Signal transduction mechanisms] 100.00::53-350 PF00780::CNH 100.00::57-337 GO:0005730::nucleolus very confident hh_4ggc_A_1::33-47,51-54,57-59,61-80,82-109,111-123 portable psy3263 329 Q05A36::RNA-binding E3 ubiquitin-protein ligase MEX3C ::RNA-binding protein. May be involved in post-transcriptional regulatory mechanisms.::Mus musculus (taxid: 10090) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 98.22::250-300 PF00013::KH_1 99.12::4-54 GO:0043186::P granule confident hh_2dgr_A_1::80-134,136-149 very confident psy15732 550 P36407::E3 ubiquitin-protein ligase TRIM23 ::Acts as an E3 ubiquitin-protein ligase (By similarity). The C-terminus can act as an allosteric activator of the cholera toxin catalytic subunit.::Rattus norvegicus (taxid: 10116) confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 98.75::56-142 PF00025::Arf 99.64::456-541 GO:0005829::cytosol confident hh_1ksh_A_1::456-512,514-544 very confident psy11302 764 Q7TPK1::E3 ubiquitin-protein ligase UHRF1 ::Putative E3 ubiquitin-protein ligase. May participate in methylation-dependent transcriptional regulation. Important for G1/S transition. May be involved in DNA repair and chromosomal stability.::Rattus norvegicus (taxid: 10116) confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 98.49::683-756 PF02182::SAD_SRA 100.00::417-587 GO:0016363::nuclear matrix confident hh_3oln_A_1::391-619 very confident psy12278 300 Q06985::E3 ubiquitin-protein ligase SIAH1B ::E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Mediates E3 ubiquitin ligase activity either through direct binding to substrates or by functioning as the essential RING domain subunit of larger E3 complexes. Confers constitutive instability to HIPK2 through proteasomal degradation. Probably triggers the ubiquitin-mediated degradation of many substrates. Upon nitric oxid (NO) generation that follows apoptotic stimulation, interacts with S-nitrosylated GAPDH, mediating the translocation of GAPDH to the nucleus. GAPDH acts as a stabilizer of SIAH1, facilitating the degradation of nuclear proteins.::Mus musculus (taxid: 10090) very confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 97.76::47-98 PF03145::Sina 100.00::100-296 GO:0005829::cytosol very confident hh_2a25_A_1::108-300 very confident psy17006 446 Q06985::E3 ubiquitin-protein ligase SIAH1B ::E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Mediates E3 ubiquitin ligase activity either through direct binding to substrates or by functioning as the essential RING domain subunit of larger E3 complexes. Confers constitutive instability to HIPK2 through proteasomal degradation. Probably triggers the ubiquitin-mediated degradation of many substrates. Upon nitric oxid (NO) generation that follows apoptotic stimulation, interacts with S-nitrosylated GAPDH, mediating the translocation of GAPDH to the nucleus. GAPDH acts as a stabilizer of SIAH1, facilitating the degradation of nuclear proteins.::Mus musculus (taxid: 10090) confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 97.68::28-150 PF03145::Sina 100.00::248-443 GO:0005829::cytosol confident hh_2a25_A_1::257-446 very confident psy12127 263 Q965X6::E3 ubiquitin-protein ligase siah-1 ::E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.::Caenorhabditis elegans (taxid: 6239) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 97.52::16-63 PF03145::Sina 99.94::67-227 GO:0044424::intracellular part confident hh_2a25_A_1::75-148,153-157,160-225 very confident psy2479 156 Q17RB8::LON peptidase N-terminal domain and RING finger protein 1 ::::Homo sapiens (taxid: 9606) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.13::63-118 PF04564::U-box 99.48::67-139 GO:0043229::intracellular organelle confident hh_2ysl_A_1::63-118 very confident psy16189 262 Q9VRP9::E3 ubiquitin-protein ligase Bre1 ::E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-117' of histone H2B. H2B 'Lys-117' ubiquitination gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation. It thereby plays a central role in histone code and gene regulation. Required for the expression of Notch target genes in development by affecting the levels of Su(H) in imaginal disk cells and stimulating the Su(H)-mediated transcription of Notch-specific genes.::Drosophila melanogaster (taxid: 7227) confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.14::202-256 PF08647::BRE1 99.61::14-109 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2ecv_A_1::201-260 confident psy7970 290 Q86YT6::E3 ubiquitin-protein ligase MIB1 ::E3 ubiquitin-protein ligase that mediates ubiquitination of Delta receptors, which act as ligands of Notch proteins. Positively regulates the Delta-mediated Notch signaling by ubiquitinating the intracellular domain of Delta, leading to endocytosis of Delta receptors. Probably mediates ubiquitination and subsequent proteasomal degradation of DAPK1, thereby antagonizing anti-apoptotic effects of DAPK1 to promote TNF-induced apoptosis (By similarity). Mediates 'Lys-63'-linked polyubiquitination of TBK1, which probably participates in kinase activation.::Homo sapiens (taxid: 9606) confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 97.74::240-285 PF13920::zf-C3HC4_3 99.07::78-121 GO:0007219::Notch signaling pathway confident hh_2vje_A_1::75-126 confident psy8409 937 Q5SDR3::Polycomb complex protein BMI-1 ::Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. In the PRC1 complex, it is required to stimulate the E3 ubiquitin-protein ligase activity of RNF2/RING2.::Gallus gallus (taxid: 9031) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 97.42::8-62 PF13923::zf-C3HC4_2 97.95::3-36 GO:0031981::nuclear lumen confident hh_2ckl_A_1::4-84 very confident psy9669 173 Q69ZI1::E3 ubiquitin-protein ligase SH3RF1 ::Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes such as UBE2D1 or UBE2N and then transfers it to substrates. In the absence of an external substrate, it can catalyze self-ubiquitination. Stimulates ubiquitination of potassium channel KCNJ1, enhancing it's dynamin-dependent and clathrin-independent endocytosis.::Mus musculus (taxid: 10090) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.08::5-57 PF14604::SH3_9 99.59::117-167 GO:0044430::cytoskeletal part confident hh_1gri_A_1::58-96,99-153,156-171 very confident psy17011 321 Q5R9J5::E3 ubiquitin-protein ligase RING2 ::E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-119' of histone H2A, thereby playing a central role in histone code and gene regulation. H2A 'Lys-119' ubiquitination gives a specific tag for epigenetic transcriptional repression and participates in X chromosome inactivation of female mammals. May be involved in the initiation of both imprinted and random X inactivation. Essential component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones, rendering chromatin heritably changed in its expressibility. E3 ubiquitin-protein ligase activity is enhanced by BMI1/PCGF4. Acts as the main E3 ubiquitin ligase on histone H2A of the PRC1 complex, while RING1 may rather act as a modulator of RNF2/RING2 activity.::Pongo abelii (taxid: 9601) very confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 98.80::37-109 PF15227::zf-C3HC4_4 99.26::47-86 GO:0004842::ubiquitin-protein ligase activity very confident bp_2ckl_B_1::10-154 very confident psy9673 162 Q8BZT2::Putative E3 ubiquitin-protein ligase SH3RF2 ::Inhibits PPP1CA phosphatase activity. May be a E3 ubiquitin-protein ligase (Potential). May play a role in cardiac function.::Mus musculus (taxid: 10090) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.27::6-80 PF15227::zf-C3HC4_4 99.51::12-52 GO:0004842::ubiquitin-protein ligase activity confident hh_2yun_A_1::82-109,133-156 very confident psy2696 180 Q20548::Probable RING finger protein 207 homolog ::::Caenorhabditis elegans (taxid: 6239) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 98.88::30-103 PF15227::zf-C3HC4_4 99.46::40-78 GO:0005737::cytoplasm confident hh_2ecv_A_1::26-86 confident psy18180 143 Q7T308::E3 ubiquitin-protein ligase RNF168 ::E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with ube2n/ubc13 to amplify the rnf8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the rnf8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of tp53bp1 and brca1.::Danio rerio (taxid: 7955) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.14::33-80 PF15227::zf-C3HC4_4 99.60::37-75 GO:0005737::cytoplasm confident hh_3l11_A_1::26-128,131-136 very confident psy10800 81 Q5ZLS3::E3 ubiquitin-protein ligase BRE1A ::Component of the RNF20/40 E3 ubiquitin-protein ligase complex that mediates monoubiquitination of 'Lys-120' of histone H2B (H2BK120ub1). H2BK120ub1 gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation (H3K4me and H3K79me, respectively).::Gallus gallus (taxid: 9031) confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.16::19-74 PF15227::zf-C3HC4_4 99.64::27-65 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2ecv_A_1::19-77 very confident psy18179 108 Q7T308::E3 ubiquitin-protein ligase RNF168 ::E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with ube2n/ubc13 to amplify the rnf8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the rnf8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of tp53bp1 and brca1.::Danio rerio (taxid: 7955) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.25::14-62 PF15227::zf-C3HC4_4 99.71::19-57 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_3l11_A_1::8-103 very confident psy10334 314 O94972::E3 ubiquitin-protein ligase TRIM37 ::E3 ubiquitin-protein ligase.::Homo sapiens (taxid: 9606) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.14::20-99 PF15227::zf-C3HC4_4 99.49::35-74 GO:0008270::zinc ion binding confident hh_3lrq_A_1::24-101 very confident psy8987 173 Q5SDR3::Polycomb complex protein BMI-1 ::Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility. In the PRC1 complex, it is required to stimulate the E3 ubiquitin-protein ligase activity of RNF2/RING2.::Gallus gallus (taxid: 9031) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 98.12::23-95 PF15227::zf-C3HC4_4 99.10::33-90 GO:0031981::nuclear lumen confident hh_2ckl_A_1::18-52,72-106,119-143 very confident psy11857 129 E1BD59::E3 ubiquitin-protein ligase TRIM56 ::E3 ubiquitin-protein ligase that mediates 'Lys-63'-linked polyubiquitination of TMEM173/STING, thereby playing a key role in innate immunity. TMEM173/STING 'Lys-63'-linked ubiquitination activates the production of type I interferon IFN-beta following detection of pathogen- and host-derived double-stranded DNA.::Bos taurus (taxid: 9913) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.22::27-111 PF15227::zf-C3HC4_4 99.60::33-80 GO:0043234::protein complex confident hh_2ecv_A_1::28-40,45-87,93-101 very confident psy11858 267 Q9C040::Tripartite motif-containing protein 2 ::UBE2D1-dependent E3 ubiquitin-protein ligase that mediates the ubiquitination of NEFL and of phosphorylated BCL2L11 (By similarity). Plays a neuroprotective function (By similarity). May play a role in neuronal rapid ischemic tolerance.::Homo sapiens (taxid: 9606) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 98.43::30-109 PF15227::zf-C3HC4_4 99.36::33-80 GO:0044424::intracellular part confident hh_2ecv_A_1::29-41,46-86 confident psy8828 81 Q5M7Z0::RING finger and transmembrane domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.34::16-79 PF15227::zf-C3HC4_4 99.65::22-59 GO:0044446::intracellular organelle part confident hh_2ecn_A_1::13-31,33-66 very confident psy10659 140 Q75EN0::Postreplication repair E3 ubiquitin-protein ligase RAD18 ::E3 RING-finger protein, member of the UBC2/RAD6 epistasis group. Associates to the E2 ubiquitin conjugating enzyme UBC2/RAD6 to form the UBC2-RAD18 ubiquitin ligase complex involved in postreplicative repair (PRR) of damaged DNA.::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) portable COG5432::RAD18 RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms] 99.47::17-90 PF15227::zf-C3HC4_4 99.61::24-61 GO:0045859::regulation of protein kinase activity confident hh_3hct_A_1::14-69,71-89 very confident psy13000 65 Q6IQ73::Charged multivesicular body protein 4c ::Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids.::Danio rerio (taxid: 7955) confident COG5453::Uncharacterized conserved protein [Function unknown] 94.66::1-12 PF03357::Snf7 96.78::20-62 GO:0051649::establishment of localization in cell confident hh_4abm_A_1::15-63 very confident psy15948 196 Q9CQD4::Charged multivesicular body protein 1b-2 ::Probable peripherally associated component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. The MVB pathway appears to require the sequential function of ESCRT-O, -I,-II and -III complexes. ESCRT-III proteins mostly dissociate from the invaginating membrane before the ILV is released. The ESCRT machinery also functions in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis. ESCRT-III proteins are believed to mediate the necessary vesicle extrusion and/or membrane fission activities, possibly in conjunction with the AAA ATPase VPS4. Involved in cytokinesis. Involved in recruiting VPS4A and/or VPS4B and SPAST to the midbody of dividing cells.::Mus musculus (taxid: 10090) very confident COG5491::VPS24 Conserved protein implicated in secretion [Cell motility and secretion] 99.56::15-194 PF03357::Snf7 99.94::3-170 GO:0000910::cytokinesis very confident hh_2gd5_A_1::2-159,163-170 very confident psy16159 175 Q9UQN3::Charged multivesicular body protein 2b ::Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. The MVB pathway appears to require the sequential function of ESCRT-O, -I,-II and -III complexes. ESCRT-III proteins mostly dissociate from the invaginating membrane before the ILV is released. The ESCRT machinery also functions in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis and the budding of enveloped viruses (HIV-1 and other lentiviruses). ESCRT-III proteins are believed to mediate the necessary vesicle extrusion and/or membrane fission activities, possibly in conjunction with the AAA ATPase VPS4.::Homo sapiens (taxid: 9606) confident COG5491::VPS24 Conserved protein implicated in secretion [Cell motility and secretion] 99.58::13-174 PF03357::Snf7 99.85::1-142 GO:0005634::nucleus confident hh_2gd5_A_1::1-131,135-142 very confident psy13382 237 Q54DB1::Charged multivesicular body protein 2a homolog 2 ::Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and are delivered to lysosomes enabling degradation of membrane proteins.::Dictyostelium discoideum (taxid: 44689) very confident COG5491::VPS24 Conserved protein implicated in secretion [Cell motility and secretion] 99.61::29-185 PF03357::Snf7 99.93::17-185 GO:0005829::cytosol very confident hh_2gd5_A_1::4-7,9-173,177-184 very confident psy12999 191 Q9D8B3::Charged multivesicular body protein 4b ::Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. The MVB pathway appears to require the sequential function of ESCRT-O, -I,-II and -III complexes. ESCRT-III proteins mostly dissociate from the invaginating membrane before the ILV is released. The ESCRT machinery also functions in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis. ESCRT-III proteins are believed to mediate the necessary vesicle extrusion and/or membrane fission activities, possibly in conjunction with the AAA ATPase VPS4. When overexpressed, membrane-assembled circular arrays of CHMP4B filaments can promote or stabilize negative curvature and outward budding.::Mus musculus (taxid: 10090) very confident COG5491::VPS24 Conserved protein implicated in secretion [Cell motility and secretion] 96.73::42-148 PF03357::Snf7 99.95::2-164 GO:0005829::cytosol confident hh_3um3_B_1::87-171,176-191 very confident psy1858 114 Q9DB34::Charged multivesicular body protein 2a ::Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. The MVB pathway appears to require the sequential function of ESCRT-O, -I,-II and -III complexes. ESCRT-III proteins mostly dissociate from the invaginating membrane before the ILV is released. The ESCRT machinery also functions in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis. ESCRT-III proteins are believed to mediate the necessary vesicle extrusion and/or membrane fission activities, possibly in conjunction with the AAA ATPase VPS4.::Mus musculus (taxid: 10090) confident COG5491::VPS24 Conserved protein implicated in secretion [Cell motility and secretion] 98.17::27-111 PF03357::Snf7 99.49::17-113 GO:0005829::cytosol confident hh_3frt_A_1::7-113 very confident psy1217 130 Q8BTE0::UPF0369 protein C6orf57 homolog ::::Mus musculus (taxid: 10090) confident COG5508::Uncharacterized conserved small protein [Function unknown] 99.43::102-130 PF07896::DUF1674 99.76::83-130 GO:0005739::mitochondrion confident hh_2k5k_A_1::101-130 very confident psy11632 450 Q9UB00::Putative glucosylceramidase 4 ::::Caenorhabditis elegans (taxid: 6239) confident COG5520::O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] 100.00::44-449 PF02055::Glyco_hydro_30 100.00::18-450 GO:0051384::response to glucocorticoid stimulus confident hh_2wnw_A_1::43-83,92-133,135-152,154-218,228-290,294-298,308-325,332-332,335-345,349-426,428-450 very confident psy18120 392 Q61466::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 ::Involved in chromatin remodeling. Has a strong influence on the Vitamin D-mediated transcriptional activity from an enhancer Vitamin D receptor element (VDRE). May be a link between mammalian SWI-SNF-like chromatin remodeling complexes and the vitamin D receptor (VDR) heterodimer. Mediates critical interactions between nuclear receptors and the BRG1/SMARCA4 chromatin-remodeling complex for transactivation. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene (By similarity). Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.::Mus musculus (taxid: 10090) confident COG5531::SWIB-domain-containing proteins implicated in chromatin remodeling [Chromatin structure and dynamics] 99.89::215-389 PF02201::SWIB 99.87::301-374 GO:0032947::protein complex scaffold confident hh_1uhr_A_1::296-383 very confident psy2295 276 Q5ZM45::Ubiquitin carboxyl-terminal hydrolase 48 ::Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.::Gallus gallus (taxid: 9031) confident COG5533::UBP5 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::55-273 PF00443::UCH 99.95::61-276 GO:0005829::cytosol confident hh_1nb8_A_1::57-99,114-133,135-165,167-175,179-247,249-275 very confident psy13202 242 B1AQJ2::Ubiquitin carboxyl-terminal hydrolase 36 ::May be required for maintaining multiple types of adult stem cells. May function as a transcriptional repressor by continually deubiquiting histone H2B at the promoters of genes critical for cellular differentiation, thereby preventing histone H3 'Lys-4' trimethylation (H3K4).::Mus musculus (taxid: 10090) portable COG5533::UBP5 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::9-210 PF00443::UCH 100.00::1-207 GO:0016579::protein deubiquitination confident hh_3i3t_A_1::1-164,166-178,180-213 very confident psy14013 792 Q9D3E6::Cohesin subunit SA-1 ::Component of cohesin complex, a complex required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At anaphase, the complex is cleaved and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis.::Mus musculus (taxid: 10090) portable COG5537::IRR1 Cohesin [Cell division and chromosome partitioning] 99.97::96-553 PF08514::STAG 100.00::158-277 GO:0000785::chromatin confident rp_1vt4_I_1::303-308,312-320,330-334,340-400,404-436,438-451,455-483,489-545,547-551,555-573,577-586,588-609,612-617,619-648,654-686,688-745 portable psy12903 267 Q9VL00::Ubiquitin thioesterase otubain-like ::Possible hydrolase that can remove conjugated ubiquitin from proteins in vitro and may therefore play an important regulatory role at the level of protein turnover by preventing degradation.::Drosophila melanogaster (taxid: 7227) very confident COG5539::Predicted cysteine protease (OTU family) [Posttranslational modification, protein turnover, chaperones] 98.75::55-265 PF10275::Peptidase_C65 100.00::40-266 GO:0071108::protein K48-linked deubiquitination very confident hh_4ddg_A_1::20-144,146-266 very confident psy7337 233 Q9P253::Vacuolar protein sorting-associated protein 18 homolog ::May play a role in vesicle-mediated protein trafficking to lysosomal compartments and in membrane docking/fusion reactions of late endosomes/lysosomes.::Homo sapiens (taxid: 9606) portable COG5540::RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 97.55::87-152 PF10367::Vps39_2 99.83::11-117 GO:0005773::vacuole confident hh_2ecv_A_1::84-97,99-102,104-124,139-152 portable psy5318 176 Q9Y4L5::E3 ubiquitin-protein ligase RNF115 ::Acts as an E2-dependent E3 ubiquitin-protein ligase. May be involved in endocytic trafficking.::Homo sapiens (taxid: 9606) confident COG5540::RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 99.34::95-145 PF13639::zf-RING_2 99.60::98-140 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2l0b_A_1::69-145 very confident psy12643 144 Q9VE61::E3 ubiquitin-protein ligase RNF181 homolog ::E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.::Drosophila melanogaster (taxid: 7227) confident COG5540::RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 99.01::64-113 PF13639::zf-RING_2 99.46::65-108 GO:0008270::zinc ion binding confident hh_2l0b_A_1::38-113 very confident psy9087 170 Q8BI21::RING finger protein 38 ::::Mus musculus (taxid: 10090) confident COG5540::RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 99.09::131-168 PF13639::zf-RING_2 99.47::133-170 GO:0016567::protein ubiquitination confident hh_1x4j_A_1::113-169 very confident psy16979 114 Q6AY01::E3 ubiquitin-protein ligase RNF133 ::Has E3 ubiquitin-protein ligase activity.::Rattus norvegicus (taxid: 10116) portable COG5540::RING-finger-containing ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 99.47::73-114 PF13639::zf-RING_2 99.73::74-114 GO:0071944::cell periphery confident hh_2l0b_A_1::48-114 very confident psy1916 195 Q554E2::Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase ::Adds the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Glc(1)Man(9)GlcNAc(2)-PP-Dol.::Dictyostelium discoideum (taxid: 44689) confident COG5542::Predicted integral membrane protein [Function unknown] 97.17::34-192 PF03155::Alg6_Alg8 100.00::2-195 GO:0000033::alpha-1,3-mannosyltransferase activity confident no hit no match psy2949 367 P98063::Bone morphogenetic protein 1 ::Cleaves the C-terminal propeptides of procollagen I, II and III. Induces cartilage and bone formation. May participate in dorsoventral patterning during early development by cleaving chordin (CHRD).::Mus musculus (taxid: 10090) portable COG5549::Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones] 97.20::40-119 PF01400::Astacin 100.00::22-215 GO:0008233::peptidase activity confident hh_3lq0_A_1::1-33,35-36,38-94,98-152,155-179,181-215 very confident psy2976 184 Q9DER7::Tolloid-like protein 1 ::Protease which processes procollagen C-propeptides, such as chordin, probiglycan and prolysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.::Gallus gallus (taxid: 9031) confident COG5549::Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones] 97.30::86-170 PF01400::Astacin 100.00::68-184 GO:0010629::negative regulation of gene expression confident hh_3edh_A_1::62-111,114-184 very confident psy1890 242 P98063::Bone morphogenetic protein 1 ::Cleaves the C-terminal propeptides of procollagen I, II and III. Induces cartilage and bone formation. May participate in dorsoventral patterning during early development by cleaving chordin (CHRD).::Mus musculus (taxid: 10090) portable COG5549::Predicted Zn-dependent protease [Posttranslational modification, protein turnover, chaperones] 97.40::41-120 PF01400::Astacin 100.00::23-219 GO:0035188::hatching confident hh_3edh_A_1::17-65,67-77,80-219 very confident psy5204 209 Q20893::Cysteine dioxygenase 1 ::::Caenorhabditis elegans (taxid: 6239) confident COG5553::Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only] 99.92::22-189 PF05995::CDO_I 100.00::17-189 GO:0007595::lactation confident hh_3eln_A_1::16-38,40-128,135-208 very confident psy4445 279 Q20893::Cysteine dioxygenase 1 ::::Caenorhabditis elegans (taxid: 6239) confident COG5553::Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only] 99.34::78-267 PF05995::CDO_I 100.00::69-276 GO:0051384::response to glucocorticoid stimulus confident hh_3eln_A_1::75-146,205-242,247-276 very confident psy10717 107 Q80U87::Ubiquitin carboxyl-terminal hydrolase 8 ::Hydrolase that can remove conjugated ubiquitin from proteins and therefore plays an important regulatory role at the level of protein turnover by preventing degradation. Converts both 'Lys-48' an 'Lys-63'-linked ubiquitin chains. Catalytic activity is enhanced in the M phase. Involved in cell proliferation. Required to enter into S phase in response to serum stimulation. May regulate T-cell anergy mediated by RNF128 via the formation of a complex containing RNF128 and OTUB1. Probably regulates the stability of STAM2 and RASGRF1. Regulates endosomal ubiquitin dynamics, cargo sorting, membrane traffic at early endosomes, and maintenance of ESCRT-0 stability. The level of protein ubiquitination on endosomes is essential for maintaining the morphology of the organelle. Deubiquitinates EPS15 and controles tyrosine kinase stability. Removes conjugated ubiquitin from EGFR thus regulating EGFR degradation and downstream MAPK signaling. Involved in acrosome biogenesis through interaction with the spermatid ESCRT-0 complex and microtubules. Deubiquitinates BIRC6/bruce and KIF23/MKLP1.::Mus musculus (taxid: 10090) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.95::1-102 PF00443::UCH 99.95::1-98 GO:0004843::ubiquitin-specific protease activity confident hh_2y6e_A_1::1-105 very confident psy18082 280 Q96K76::Ubiquitin carboxyl-terminal hydrolase 47 ::Ubiquitin-specific protease that specifically deubiquitinates monoubiquitinated DNA polymerase beta (POLB), stabilizing POLB thereby playing a role in base-excision repair (BER). Acts as a regulator of cell growth and genome integrity. May also indirectly regulates CDC25A expression at a transcriptional level.::Homo sapiens (taxid: 9606) portable COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.92::5-199 PF00443::UCH 99.91::9-196 GO:0005737::cytoplasm confident hh_1nb8_A_1::4-57,128-199 very confident psy2608 321 Q8NFA0::Ubiquitin carboxyl-terminal hydrolase 32 ::::Homo sapiens (taxid: 9606) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::151-281 PF00443::UCH 99.83::173-277 GO:0005794::Golgi apparatus confident hh_2y6e_A_1::151-283 very confident psy2130 470 A5D9H7::Ubiquitin carboxyl-terminal hydrolase 12 ::Deubiquitinating enzyme. Has almost no deubiquitinating activity by itself and requires the interaction with WDR48 to have a high activity. Not involved in deubiquitination of monoubiquitinated FANCD2.::Bos taurus (taxid: 9913) portable COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::21-453 PF00443::UCH 100.00::225-449 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2ayn_A_1::18-67,69-105,113-183,185-185,190-203,327-434,440-457 very confident psy7177 66 P39538::Ubiquitin carboxyl-terminal hydrolase 12 ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.78::1-56 PF00443::UCH 99.79::1-52 GO:0010468::regulation of gene expression confident hh_2y6e_A_1::1-60 very confident psy7178 154 Q93Y01::Ubiquitin carboxyl-terminal hydrolase 9 ::Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.::Arabidopsis thaliana (taxid: 3702) portable COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.84::63-154 PF00443::UCH 99.73::66-154 GO:0010468::regulation of gene expression confident hh_3i3t_A_1::65-154 very confident psy7711 577 Q0IIF7::Ubiquitin carboxyl-terminal hydrolase 14 ::Proteasome-associated deubiquitinase which releases ubiquitin from the proteasome targeted ubiquitinated proteins. Ensures the regeneration of ubiquitin at the proteasome. Is a reversibly associated subunit of the proteasome and a large fraction of proteasome-free protein exists within the cell. Required for the degradation of the chemokine receptor CXCR4 which is critical for CXCL12-induced cell chemotaxis. Serves also as a physiological inhibitor of endoplasmic reticulum-associated degradation (ERAD) under the non-stressed condition by inhibiting the degradation of unfolded endoplasmic reticulum proteins via interaction with ERN1. Indispensable for synaptic development and function at neuromuscular junctions (NMJs).::Bos taurus (taxid: 9913) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::188-569 PF00443::UCH 100.00::190-573 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2ayn_A_1::187-250,253-465,472-474,477-477,483-485,498-501,507-576 very confident psy10711 203 Q9MAQ3::Putative ubiquitin carboxyl-terminal hydrolase 11 ::Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.::Arabidopsis thaliana (taxid: 3702) portable COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::20-195 PF00443::UCH 99.94::22-180 GO:0016578::histone deubiquitination confident hh_2gfo_A_1::10-94,105-202 very confident psy10716 123 Q9MAQ3::Putative ubiquitin carboxyl-terminal hydrolase 11 ::Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.::Arabidopsis thaliana (taxid: 3702) portable COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.84::20-116 PF00443::UCH 99.76::22-117 GO:0016578::histone deubiquitination confident rp_3nhe_A_1::16-95 very confident psy8602 140 A6H8I0::Ubiquitin carboxyl-terminal hydrolase 22 ::Histone deubiquitinating component of the transcription regulatory histone acetylation (HAT) complex SAGA. Catalyzes the deubiquitination of both histones H2A and H2B, thereby acting as a coactivator. Recruited to specific gene promoters by activators, where it is required for transcription.::Danio rerio (taxid: 7955) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.95::5-139 PF00443::UCH 99.86::43-135 GO:0016579::protein deubiquitination confident hh_3nhe_A_1::9-91,93-139 very confident psy15062 375 O57429::Ubiquitin carboxyl-terminal hydrolase 2 ::Hydrolase that deubiquitinates polyubiquitinated target proteins such as MDM2, MDM4 and CCND1. Possesses both ubiquitin-specific peptidase and isopeptidase activities.::Gallus gallus (taxid: 9031) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::3-375 PF00443::UCH 100.00::5-372 GO:0016579::protein deubiquitination confident hh_2ayn_A_1::2-66,68-118,131-188,227-237,239-291,293-336,338-375 very confident psy1713 397 P34547::Probable ubiquitin carboxyl-terminal hydrolase 46 ::::Caenorhabditis elegans (taxid: 6239) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::74-397 PF00443::UCH 100.00::75-397 GO:0016579::protein deubiquitination confident hh_1nb8_A_1::72-112,120-140,142-154,157-186,198-226,244-247,266-303,305-373,375-397 very confident psy3162 91 P45974::Ubiquitin carboxyl-terminal hydrolase 5 ::Cleaves linear and branched multiubiquitin polymers with a marked preference for branched polymers. Involved in unanchored 'Lys-48'-linked polyubiquitin disassembly. Binds linear and 'Lys-63'-linked polyubiquitin with a lower affinity. Knock-down of USP5 causes the accumulation of p53/TP53 and an increase in p53/TP53 transcriptional activity because the unanchored polyubiquitin that accumulates is able to compete with ubiquitinated p53/TP53 but not with MDM2 for proteasomal recognition.::Homo sapiens (taxid: 9606) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.65::5-78 PF00443::UCH 98.92::15-81 GO:0016579::protein deubiquitination confident hh_3ihp_A_1::5-90 very confident psy4215 103 Q91W36::Ubiquitin carboxyl-terminal hydrolase 3 ::Hydrolase that deubiquitinates monoubiquitinated target proteins such as histone H2A and H2B. Required for proper progression through S phase and subsequent mitotic entry. May regulate the DNA damage response (DDR) checkpoint through deubiquitination of H2A at DNA damage sites. Associates with the chromatin.::Mus musculus (taxid: 10090) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.69::3-79 PF00443::UCH 99.76::18-75 GO:0042393::histone binding confident hh_2y6e_A_1::17-31,33-82 very confident psy1343 337 Q53GS9::U4/U6.U5 tri-snRNP-associated protein 2 ::May play a role in mRNA splicing. It is unsure if the protein really exhibits hydrolase activity. Could be a competitor of ubiquitin C-terminal hydrolases (UCHs).::Homo sapiens (taxid: 9606) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 100.00::1-327 PF00443::UCH 100.00::1-323 GO:0071011::precatalytic spliceosome confident hh_3i3t_A_1::1-22,25-48,50-65,67-113,130-160,169-192,194-247,264-291,294-330 very confident psy5641 192 Q9MAQ3::Putative ubiquitin carboxyl-terminal hydrolase 11 ::Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.::Arabidopsis thaliana (taxid: 3702) portable COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.96::60-186 PF00443::UCH 99.88::62-179 GO:0071944::cell periphery confident hh_2gfo_A_1::57-105,111-181 very confident psy18073 639 Q5ZLK1::DDB1- and CUL4-associated factor 13 ::Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.::Gallus gallus (taxid: 9031) confident COG5560::UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] 99.94::1-94 PF02239::Cytochrom_D1 99.52::153-482 GO:0080008::Cul4-RING ubiquitin ligase complex confident no hit no match psy9201 264 P22681::E3 ubiquitin-protein ligase CBL ::Adapter protein that functions as a negative regulator of many signaling pathways that are triggered by activation of cell surface receptors. Acts as an E3 ubiquitin-protein ligase, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, and then transfers it to substrates promoting their degradation by the proteasome. Recognizes activated receptor tyrosine kinases, including KIT, FLT1, FGFR1, FGFR2, PDGFRA, PDGFRB, EGFR, CSF1R, EPHA8 and KDR and terminates signaling. Recognizes membrane-bound HCK and other kinases of the SRC family and mediates their ubiquitination and degradation. Participates in signal transduction in hematopoietic cells. Plays an important role in the regulation of osteoblast differentiation and apoptosis. Essential for osteoclastic bone resorption. The Tyr-731 phosphorylated form induces the activation and recruitment of phosphatidylinositol 3-kinase to the cell membrane in a signaling pathway that is critical for osteoclast function.::Homo sapiens (taxid: 9606) confident COG5574::PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 98.78::201-250 PF02762::Cbl_N3 100.00::85-170 GO:0005730::nucleolus very confident hh_2y1n_A_1::71-147,158-253 very confident psy6056 153 Q80Z37::E3 ubiquitin-protein ligase Topors ::Functions as an E3 ubiquitin-protein ligase and as a E3 SUMO1-protein ligase. Probable tumor suppressor involved in cell growth, cell proliferation and apoptosis that regulates p53/TP53 stability through ubiquitin-dependent degradation. May regulate chromatin modification through sumoylation of several chromatin modification-associated proteins. May be involved in DNA-damage-induced cell death through IKBKE sumoylation.::Mus musculus (taxid: 10090) portable COG5574::PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 98.84::43-97 PF13639::zf-RING_2 99.35::47-92 GO:0005929::cilium confident hh_1chc_A_1::44-80,86-108 very confident psy7604 118 Q6NW85::E3 ubiquitin-protein ligase arih1l ::E3 ubiquitin-protein ligase, which catalyzes polyubiquitination of target proteins together with ubiquitin-conjugating enzyme E2 ube2l3.::Danio rerio (taxid: 7955) confident COG5574::PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 97.61::32-95 PF15227::zf-C3HC4_4 99.09::36-83 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_1wim_A_1::31-71,73-100,102-118 very confident psy3978 243 Q08E13::RING finger protein 10 ::::Bos taurus (taxid: 9913) confident COG5574::PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 98.86::82-137 PF15227::zf-C3HC4_4 99.46::87-128 GO:0010626::negative regulation of Schwann cell proliferation confident hh_2ecv_A_1::81-142 very confident psy2200 248 Q91YT2::E3 ubiquitin-protein ligase RNF185 ::Mitochondrial E3 ubiquitin-protein ligase that regulates selective mitochondrial autophagy by mediating 'Lys-63'-linked polyubiquitination of BNIP1.::Mus musculus (taxid: 10090) confident COG5574::PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 98.87::131-185 PF15227::zf-C3HC4_4 99.40::136-176 GO:0070936::protein K48-linked ubiquitination confident hh_4ap4_A_1::32-68,71-83,97-100,128-168,172-190 very confident psy303 62 Q24168::Origin recognition complex subunit 2 ::Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.::Drosophila melanogaster (taxid: 7227) confident COG5575::ORC2 Origin recognition complex, subunit 2 [DNA replication, recombination, and repair] 99.81::5-62 PF04084::ORC2 99.95::4-62 GO:0043234::protein complex confident no hit no match psy16978 154 Q9YGT4::Homeobox protein Hox-B6b ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Danio rerio (taxid: 7955) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.60::32-98 PF00046::Homeobox 99.69::39-95 GO:0000122::negative regulation of transcription from RNA polymerase II promoter very confident hh_1ftt_A_1::38-98 very confident psy9614 103 A6YP92::Homeobox protein ARX ::Transcription factor required for normal brain development. May be important for maintenance of specific neuronal subtypes in the cerebral cortex and axonal guidance in the floor plate.::Rattus norvegicus (taxid: 10116) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.63::13-78 PF00046::Homeobox 99.75::18-74 GO:0000790::nuclear chromatin confident hh_2cue_A_1::13-80 very confident psy7087 162 Q62782::Paired mesoderm homeobox protein 2A ::May be involved in regulating the specificity of expression of the catecholamine biosynthetic genes. Acts as a transcription activator/factor. Could maintain the noradrenergic phenotype.::Rattus norvegicus (taxid: 10116) portable COG5576::Homeodomain-containing transcription factor [Transcription] 98.24::114-162 PF00046::Homeobox 98.88::117-162 GO:0000790::nuclear chromatin confident hh_2dmu_A_1::114-162 very confident psy2704 256 O97039::Retinal homeobox protein Rax (Fragment) ::::Dugesia japonica (taxid: 6161) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.49::110-177 PF00046::Homeobox 99.68::115-171 GO:0001071::nucleic acid binding transcription factor activity confident hh_1ftt_A_1::114-176 very confident psy15969 111 Q9NJB5::Homeobox protein onecut ::Transcriptional regulator. Binds and recognize ATTG sites.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.49::37-98 PF00046::Homeobox 99.69::45-97 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription very confident hh_2d5v_A_1::27-35,37-97,102-107 very confident psy4625 120 P09015::Homeobox protein engrailed-2a ::::Danio rerio (taxid: 7955) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.61::11-80 PF00046::Homeobox 99.76::17-73 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_1b72_A_1::12-77 very confident psy7434 91 P56915::Homeobox protein goosecoid ::Regulates chordin (CHRD). May play a role in spatial programing within discrete embryonic fields or lineage compartments during organogenesis. In concert with NKX3-2, plays a role in defining the structural components of the middle ear; required for the development of the entire tympanic ring.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.56::40-91 PF00046::Homeobox 99.03::46-90 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription very confident hh_2dmu_A_1::43-90 very confident psy15887 104 P81062::Pituitary homeobox 3 ::Transcriptional regulator which is important for the differentiation and maintenance of meso-diencephalic dopaminergic (mdDA) neurons during development. In addition to its importance during development, it also has roles in the long-term survival and maintenance of the mdDA neurons. Activates NR4A2/NURR1-mediated transcription of genes such as SLC6A3, SLC18A2, TH and DRD2 which are essential for development of mdDA neurons. Acts by decreasing the interaction of NR4A2/NURR1 with the corepressor NCOR2/SMRT which acts through histone deacetylases (HDACs) to keep promoters of NR4A2/NURR1 target genes in a repressed deacetylated state. Essential for the normal lens development and differentiation. Plays a critical role in the maintenance of mitotic activity of lens epithelial cells, fiber cell differentiation and in the control of the temporal and spatial activation of fiber cell-specific crystallins. Positively regulates FOXE3 expression and negatively regulates PROX1 in the anterior lens epithelium, preventing activation of CDKN1B/P27Kip1 and CDKN1C/P57Kip2 and thus maintains lens epithelial cells in cell cycle.::Rattus norvegicus (taxid: 10116) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.51::47-100 PF00046::Homeobox 99.61::50-100 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription very confident hh_2dms_A_1::46-100 very confident psy14727 67 A6NNA5::Dorsal root ganglia homeobox protein ::Transcription factor required for the formation of correct projections from nociceptive sensory neurons to the dorsal horn of the spinal cord and normal perception of pain.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.79::20-67 PF00046::Homeobox 99.32::23-67 GO:0001764::neuron migration confident hh_3a02_A_1::25-67 very confident psy7107 76 Q99453::Paired mesoderm homeobox protein 2B ::Involved in the development of several major noradrenergic neuron populations, including the locus coeruleus. Transcription factor which could determine a neurotransmitter phenotype in vertebrates. Enhances second-messenger-mediated activation of the dopamine beta-hydrolase and c-fos promoters, and of several enhancers including cAMP-response element and serum-response element.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.42::28-75 PF00046::Homeobox 99.19::31-76 GO:0001764::neuron migration confident hh_1fjl_A_1::26-75 very confident psy15107 135 P22810::Homeotic protein ocelliless ::Transcriptional regulator involved in pattern formation and cell determination in the embryonic CNS and larval imaginal disks. Also later in development to coordinate the expression of regulatory and structural genes required for photoreceptor cell fate in the ocelli. Has a dual role in the terminal differentiation of subtypes of photoreceptors by regulating rhodopsin (rh) expression: essential for establishing the expression of rh genes in the pale subset of ommatidia as well as repressing Rh6 in outer photoreceptors.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.63::65-129 PF00046::Homeobox 99.76::69-125 GO:0003406::retinal pigment epithelium development confident hh_2dms_A_1::65-132 very confident psy16797 99 O43365::Homeobox protein Hox-A3 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.67::13-83 PF00046::Homeobox 99.78::21-77 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity confident hh_2h1k_A_1::19-79 very confident psy11043 217 O93307::Homeobox protein SIX6 ::May be involved in eye development.::Gallus gallus (taxid: 9031) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.04::158-210 PF00046::Homeobox 99.49::152-204 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity very confident bp_4egc_A_1::20-60,65-210 very confident psy4868 169 P63016::Paired box protein Pax-6 ::Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters (By similarity). Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains.::Rattus norvegicus (taxid: 10116) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.55::56-120 PF00046::Homeobox 99.74::59-115 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity confident hh_1uhs_A_1::59-117 very confident psy2181 490 P63016::Paired box protein Pax-6 ::Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters (By similarity). Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains.::Rattus norvegicus (taxid: 10116) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.13::105-172 PF00046::Homeobox 99.39::108-164 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity confident hh_2dmu_A_1::105-166 very confident psy4349 80 P29673::Protein apterous ::Required for the normal development of the wing and halter imaginal disks.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.58::33-80 PF00046::Homeobox 99.18::36-80 GO:0003714::transcription corepressor activity confident hh_2dmq_A_1::32-80 very confident psy15100 165 P22807::Homeobox protein slou ::May play a role in specifying the identity of particular somatic muscles and neurons of the CNS.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.59::34-100 PF00046::Homeobox 99.75::40-96 GO:0005634::nucleus confident hh_1ftt_A_1::39-101 very confident psy5913 341 Q93348::Putative iroquois-class homeodomain protein irx-1 ::::Caenorhabditis elegans (taxid: 6239) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.24::4-68 PF00046::Homeobox 99.46::8-64 GO:0005634::nucleus confident hh_1du6_A_1::6-64 very confident psy526 274 Q9W7E8::Homeobox protein koza ::May regulate cell proliferation in a tissue-specific manner.::Xenopus laevis (taxid: 8355) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.46::58-121 PF00046::Homeobox 99.70::61-117 GO:0005634::nucleus confident hh_1nk2_P_1::56-122 very confident psy8301 157 no hit no match COG5576::Homeodomain-containing transcription factor [Transcription] 99.60::5-67 PF00046::Homeobox 99.77::8-64 GO:0005634::nucleus confident no hit no match psy1901 205 P23760::Paired box protein Pax-3 ::Probable transcription factor associated with development of alveolar rhabdomyosarcoma.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.55::33-97 PF00046::Homeobox 99.72::36-92 GO:0005667::transcription factor complex confident hh_1ftt_A_1::35-96 very confident psy4325 306 P53412::LIM/homeobox protein Lhx3 ::Transcriptional factor that defines subclasses of motoneurons that segregate into columns in the spinal cord and select distinct axon pathways. Acts in conjunction with LIM-1, ISL-1 and ISL-2.::Gallus gallus (taxid: 9031) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.52::196-268 PF00046::Homeobox 99.62::205-261 GO:0005667::transcription factor complex confident hh_2rgt_A_1::69-196,201-231 very confident psy3735 91 Q06453::Homeobox protein aristaless ::Involved in the morphogenesis of proximal and distal pattern elements in a subset of appendages. Also has a role in early imaginal disk development.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.71::27-89 PF00046::Homeobox 99.80::30-88 GO:0005667::transcription factor complex confident hh_1fjl_A_1::26-62,65-89 very confident psy17007 165 Q6R3Q6::Brain-specific homeobox protein homolog ::DNA binding protein that function as transcriptional activator (By similarity). May play a role in the determination and function of cell types in the brain.::Danio rerio (taxid: 7955) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.43::42-106 PF00046::Homeobox 99.67::46-101 GO:0005667::transcription factor complex confident hh_1ftt_A_1::45-105 very confident psy14571 123 A2D4R4::Homeobox protein Hox-B1 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Acts on the anterior body structures.::Ateles geoffroyi (taxid: 9509) portable COG5576::Homeodomain-containing transcription factor [Transcription] 98.18::72-122 PF00046::Homeobox 98.90::77-122 GO:0005730::nucleolus confident hh_1b72_A_1::74-122 very confident psy9565 288 O35750::Short stature homeobox protein 2 (Fragment) ::May be a growth regulator and have a role in specifying neural systems involved in processing somatosensory information, as well as in face and body structure formation.::Rattus norvegicus (taxid: 10116) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.49::92-152 PF00046::Homeobox 99.65::93-147 GO:0005730::nucleolus confident hh_2dmu_A_1::90-148 very confident psy12776 435 P63016::Paired box protein Pax-6 ::Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters (By similarity). Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains.::Rattus norvegicus (taxid: 10116) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.14::231-277 PF00046::Homeobox 99.41::233-277 GO:0005730::nucleolus confident hh_2dmu_A_1::230-277 very confident psy9181 262 Q06348::Paired mesoderm homeobox protein 2 ::::Mus musculus (taxid: 10090) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.46::149-211 PF00046::Homeobox 99.61::153-207 GO:0005730::nucleolus confident hh_2dmu_A_1::149-207 very confident psy10196 354 Q9Y2V3::Retinal homeobox protein Rx ::Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation. Binds to the photoreceptor conserved element-I (PCE-1/Ret 1) in the photoreceptor cell-specific arrestin promoter.::Homo sapiens (taxid: 9606) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.31::70-132 PF00046::Homeobox 99.53::72-128 GO:0005730::nucleolus confident hh_2dmu_A_1::69-132 very confident psy2123 143 P63013::Paired mesoderm homeobox protein 1 ::Acts as a transcriptional regulator of muscle creatine kinase (MCK) and so has a role in the establishment of diverse mesodermal muscle types. The protein binds to an A/T-rich element in the muscle creatine enhancer.::Mus musculus (taxid: 10090) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.59::25-88 PF00046::Homeobox 99.76::28-84 GO:0005737::cytoplasm confident hh_1b72_A_1::2-18,20-88 very confident psy5355 76 P78426::Homeobox protein Nkx-6.1 ::Transcription factor which binds to specific A/T-rich DNA sequences in the promoter regions of a number of genes. Involved in transcriptional regulation in islet beta cells. Binds to the insulin promoter and is involved in regulation of the insulin gene. Together with NKX2-2 and IRX3 acts to restrict the generation of motor neurons to the appropriate region of the neural tube. Belongs to the class II proteins of neuronal progenitor factors, which are induced by SHH signals.::Homo sapiens (taxid: 9606) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.76::4-73 PF00046::Homeobox 99.83::10-65 GO:0007224::smoothened signaling pathway very confident hh_3a03_A_1::14-66 very confident psy16796 166 P31264::Homeotic protein proboscipedia ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Controls development of mouthparts, and labial and maxillary palps.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.34::76-139 PF00046::Homeobox 99.48::79-132 GO:0007275::multicellular organismal development confident no hit no match psy16514 155 Q5NSW5::Homeobox protein DBX1 ::Could have a role in patterning the central nervous system during embryogenesis. Has a key role in regulating the distinct phenotypic features that distinguish two major classes of ventral interneurons, V0 and V1 neurons. Regulates the transcription factor profile, neurotransmitter phenotype, intraspinal migratory path and axonal trajectory of V0 neurons, features that differentiate them from an adjacent set of V1 neurons.::Rattus norvegicus (taxid: 10116) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.57::12-75 PF00046::Homeobox 99.74::15-71 GO:0007411::axon guidance confident hh_1ftt_A_1::14-72 very confident psy9869 111 Q9TT89::Homeobox protein Hox-B7 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Bos taurus (taxid: 9913) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.57::16-83 PF00046::Homeobox 99.71::23-79 GO:0007494::midgut development very confident no hit no match psy14872 414 Q62231::Homeobox protein SIX1 ::Transcription factor that is involved in regulation of organogenesis. Seems to be required for development of kidney, muscle and inner ear. Seems to be involved in later steps of myogenic differentiation. May be involved in limb tendon and ligament development. Binds a 5'-TCA[AG][AG]TTNC-3' motif present in the MEF3 element in the myogenin promoter. Thought to be regulated by association with Dach and Eya proteins. Acts as activator of the IGFBP5 promoter, probably coactivated by EYA2. Repression of precursor cell proliferation in myoblasts is switched to activation through recruitment of EYA3 phosphatase to the SIX1-DACH1 complex. During myogenesis, seems to act together with EYA2 and DACH2.::Mus musculus (taxid: 10090) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.90::338-399 PF00046::Homeobox 99.33::337-391 GO:0007501::mesodermal cell fate specification very confident bp_4egc_A_1::213-396 very confident psy14871 238 Q62231::Homeobox protein SIX1 ::Transcription factor that is involved in regulation of organogenesis. Seems to be required for development of kidney, muscle and inner ear. Seems to be involved in later steps of myogenic differentiation. May be involved in limb tendon and ligament development. Binds a 5'-TCA[AG][AG]TTNC-3' motif present in the MEF3 element in the myogenin promoter. Thought to be regulated by association with Dach and Eya proteins. Acts as activator of the IGFBP5 promoter, probably coactivated by EYA2. Repression of precursor cell proliferation in myoblasts is switched to activation through recruitment of EYA3 phosphatase to the SIX1-DACH1 complex. During myogenesis, seems to act together with EYA2 and DACH2.::Mus musculus (taxid: 10090) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.14::160-218 PF00046::Homeobox 99.51::157-211 GO:0007501::mesodermal cell fate specification very confident bp_4egc_A_1::33-216 very confident psy3396 128 Q9Y2V3::Retinal homeobox protein Rx ::Plays a critical role in eye formation by regulating the initial specification of retinal cells and/or their subsequent proliferation. Binds to the photoreceptor conserved element-I (PCE-1/Ret 1) in the photoreceptor cell-specific arrestin promoter.::Homo sapiens (taxid: 9606) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.37::1-45 PF00046::Homeobox 99.47::1-41 GO:0007519::skeletal muscle tissue development confident hh_2dmu_A_1::1-43 very confident psy14049 93 Q8BJI4::POU domain, class 6, transcription factor 2 ::Probable transcription factor likely to be involved in early steps in the differentiation of amacrine and ganglion cells. Recognizes and binds to the DNA sequence 5'-ATGCAAAT-3'.::Mus musculus (taxid: 10090) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.65::22-87 PF00046::Homeobox 99.81::27-83 GO:0007608::sensory perception of smell confident hh_3d1n_I_1::15-83 very confident psy10638 140 Q17R00::Homeobox protein EMX2 ::Transcription factor, which in cooperation with EMX2, acts to generate the boundary between the roof and archipallium in the developing brain. May function in combinations with OTX1/2 to specify cell fates in the developing central nervous system.::Bos taurus (taxid: 9913) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.43::31-98 PF00046::Homeobox 99.64::36-92 GO:0014028::notochord formation confident hh_3a01_A_1::31-102 very confident psy8538 64 Q99626::Homeobox protein CDX-2 ::Involved in the transcriptional regulation of multiple genes expressed in the intestinal epithelium. Important in broad range of functions from early differentiation to maintenance of the intestinal epithelial lining of both the small and large intestine.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.47::2-45 PF00046::Homeobox 99.50::2-44 GO:0017053::transcriptional repressor complex confident hh_2r5y_A_1::2-45 very confident psy10486 183 P24340::Homeobox protein Hox-D9 (Fragment) ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Gallus gallus (taxid: 9031) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.52::15-132 PF00046::Homeobox 99.66::22-77 GO:0030154::cell differentiation confident hh_1ftt_A_1::21-81 very confident psy17256 768 Q8IRC7::LIM/homeobox protein Awh ::Probable transcription factor. Required for the establishment of a subset of imaginal tissues: the abdominal histoblasts and the salivary gland imaginal rings.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.15::58-123 PF00046::Homeobox 99.35::61-117 GO:0030154::cell differentiation confident hh_2rgt_A_1::530-550,557-573,592-601,606-681,686-686,696-727 very confident psy4877 120 Q9DE09::Homeobox protein HMX1 ::DNA-binding protein that binds to the 5'-CAAG-3' core sequence. May function as a transcriptional repressor. Seems to act as a transcriptional antagonist of NKX2-5. May play an important role in the development of craniofacial structures such as the eye and ear.::Gallus gallus (taxid: 9031) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.39::3-68 PF00046::Homeobox 99.57::5-64 GO:0030154::cell differentiation confident hh_1ftt_A_1::3-22,28-66 very confident psy8536 186 Q05095::Homeobox protein CDX-1 (Fragment) ::Could play a role in the terminal differentiation of the intestine.::Rattus norvegicus (taxid: 10116) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.63::3-71 PF00046::Homeobox 99.77::6-62 GO:0031016::pancreas development confident hh_1ftt_A_1::5-65 very confident psy3429 192 Q09604::Homeobox protein vab-15 ::Probable transcription factor needed for the proper production of touch cell precursors. Essential for embryonic morphogenesis.::Caenorhabditis elegans (taxid: 6239) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.55::36-103 PF00046::Homeobox 99.76::42-98 GO:0035880::embryonic nail plate morphogenesis confident hh_1ftt_A_1::40-100 very confident psy13127 64 Q17R00::Homeobox protein EMX2 ::Transcription factor, which in cooperation with EMX2, acts to generate the boundary between the roof and archipallium in the developing brain. May function in combinations with OTX1/2 to specify cell fates in the developing central nervous system.::Bos taurus (taxid: 9913) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.66::18-64 PF00046::Homeobox 99.26::21-64 GO:0042493::response to drug very confident hh_3a03_A_1::25-64 very confident psy11996 222 P09077::Homeotic protein Sex combs reduced ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Controls the segmental transformation of the first to the second thoracic segment (prothorax to mesothorax) and of the labial palps into maxillary palps. In embryo, required for fusion of labial lobes and development of the T1 denticle belt. In adult, expression in the head is necessary for proper development of the labium. In the first thoracic segment of the adult, required for proper development of the sex comb and to suppress improper prothoracic wing development.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.43::5-72 PF00046::Homeobox 99.69::11-67 GO:0042803::protein homodimerization activity confident hh_3a02_A_2::13-70 very confident psy9529 149 P29506::Homeobox protein unc-4 ::Transcription factor that regulates synaptic specificity. Determines the pattern of synaptic input to VA motor neurons. Acts together with unc-37 by repressing the expression of VB-specific genes such as ceh-12, thereby preventing the adoption of VB motor neurons. Has no role in axonal guidance or outgrowth.::Caenorhabditis elegans (taxid: 6239) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.60::10-74 PF00046::Homeobox 99.74::14-70 GO:0042803::protein homodimerization activity confident rp_2dms_A_1::11-85 very confident psy1653 96 Q9TT89::Homeobox protein Hox-B7 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Bos taurus (taxid: 9913) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.62::4-68 PF00046::Homeobox 99.75::8-64 GO:0042803::protein homodimerization activity very confident hh_1b8i_A_1::2-66 very confident psy4078 269 P53410::Insulin gene enhancer protein ISL-2 (Fragment) ::Transcriptional factor that defines subclasses of motoneurons that segregate into columns in the spinal cord and select distinct axon pathways. Acts in conjunction with LIM-1, LIM-3 and ISL-1.::Gallus gallus (taxid: 9031) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.51::75-143 PF00046::Homeobox 99.64::83-139 GO:0043433::negative regulation of sequence-specific DNA binding transcription factor activity confident hh_2da3_A_1::77-141 very confident psy8148 390 Q94166::Homeobox protein ceh-33 ::::Caenorhabditis elegans (taxid: 6239) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.54::328-380 PF00046::Homeobox 99.02::267-320 GO:0043565::sequence-specific DNA binding confident bp_4egc_A_1::145-325 very confident psy10851 159 P53413::LIM/homeobox protein LMX-1.2 ::Specifies dorsal cell fate during limb development.::Gallus gallus (taxid: 9031) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.68::2-69 PF00046::Homeobox 99.81::7-65 GO:0048523::negative regulation of cellular process confident no hit no match psy5909 130 Q9W2Q1::Retinal homeobox protein Rx ::Appears to function in brain development.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.64::51-114 PF00046::Homeobox 99.73::54-110 GO:0048523::negative regulation of cellular process confident hh_2dms_A_1::50-116 very confident psy15514 187 P06601::Segmentation protein paired ::Pair-rule protein expressed in a segmentally repeating pattern to define the polarity of embryonic segments. Capable of sequence-specific DNA-binding.::Drosophila melanogaster (taxid: 7227) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.45::130-186 PF00046::Homeobox 99.69::133-186 GO:0048663::neuron fate commitment confident hh_2kt0_A_1::128-186 very confident psy18046 141 Q26657::Aristaless homeobox protein (Fragment) ::::Strongylocentrotus purpuratus (taxid: 7668) portable COG5576::Homeodomain-containing transcription factor [Transcription] 97.90::95-141 PF00046::Homeobox 98.87::96-140 GO:0048663::neuron fate commitment confident hh_2dmu_A_1::93-141 very confident psy15889 92 O18400::Pituitary homeobox homolog Ptx1 ::Appears to control physiological cell functions rather than pattern formation during embryogenesis.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.19::2-32 PF00046::Homeobox 98.26::2-24 GO:0048699::generation of neurons confident hh_1uhs_A_1::2-27 confident psy3734 158 Q06453::Homeobox protein aristaless ::Involved in the morphogenesis of proximal and distal pattern elements in a subset of appendages. Also has a role in early imaginal disk development.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.13::67-142 PF00046::Homeobox 99.44::69-133 GO:0048699::generation of neurons confident hh_2dms_A_1::65-106,115-118,120-136 very confident psy4272 575 P51783::Homeobox protein Hox-A9 (Fragment) ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Cavia porcellus (taxid: 10141) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.36::321-387 PF00046::Homeobox 99.56::324-380 GO:0048706::embryonic skeletal system development confident hh_1ftt_A_1::323-386 very confident psy3281 317 Q9TT89::Homeobox protein Hox-B7 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Bos taurus (taxid: 9913) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.46::236-301 PF00046::Homeobox 99.62::239-295 GO:0048863::stem cell differentiation confident hh_1nk2_P_1::236-302 very confident psy15079 74 Q61663::T-cell leukemia homeobox protein 2 ::Transcription activator that binds DNA elements with the consensus sequence 5'-CGGTAATTGG-3'. Binds DNA via its homeobox. Required for normal cell death of enteric neurons in the gastrointestinal tract. Required for normal development of the enteric nervous system, and for proper development of normal motility of the gastrointestinal tract.::Mus musculus (taxid: 10090) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.54::1-28 PF00046::Homeobox 98.33::1-19 GO:0050774::negative regulation of dendrite morphogenesis confident hh_3a03_A_1::1-20 very confident psy12003 61 P09067::Homeobox protein Hox-B5 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.97::3-34 PF00046::Homeobox 99.16::2-30 GO:0071837::HMG box domain binding confident hh_2r5y_A_1::2-32 very confident psy16800 221 Q01822::Homeobox protein Hox-D1 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Acts on the anterior body structures.::Mus musculus (taxid: 10090) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.43::134-200 PF00046::Homeobox 99.63::136-192 GO:0090103::cochlea morphogenesis confident hh_1ftt_A_1::135-199 very confident psy3400 417 Q4QQQ7::POU domain, class 3, transcription factor 1 ::May play a role in neuronal differentiation.::Xenopus tropicalis (taxid: 8364) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.44::293-359 PF00157::Pou 99.95::205-279 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription very confident hh_2xsd_C_1::203-359 very confident psy14051 256 Q8BJI4::POU domain, class 6, transcription factor 2 ::Probable transcription factor likely to be involved in early steps in the differentiation of amacrine and ganglion cells. Recognizes and binds to the DNA sequence 5'-ATGCAAAT-3'.::Mus musculus (taxid: 10090) portable COG5576::Homeodomain-containing transcription factor [Transcription] 93.72::103-166 PF00157::Pou 100.00::2-110 GO:0005634::nucleus confident hh_3d1n_I_1::5-50,85-166 very confident psy6088 289 Q9UKI9::POU domain, class 2, transcription factor 3 ::Transcription factor that binds to the octamer motif (5'-ATTTGCAT-3'). Regulated the expression of a number of genes such as SPRR2A or placental lactogen.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 97.17::193-289 PF00157::Pou 100.00::148-222 GO:0043922::negative regulation by host of viral transcription confident hh_1e3o_C_1::148-289 very confident psy17897 391 P24350::Inhibitory POU protein ::Modulates gene transcription; simultaneously generates both a specific activator and an inhibitor of gene transcription, capable of modulating two distinct regulatory programs during neural development. Has a role in olfactory behavior.::Drosophila melanogaster (taxid: 7227) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.33::325-388 PF00157::Pou 99.92::231-306 GO:0050911::detection of chemical stimulus involved in sensory perception of smell very confident hh_2xsd_C_1::228-267,271-312,316-389 very confident psy17899 145 P24350::Inhibitory POU protein ::Modulates gene transcription; simultaneously generates both a specific activator and an inhibitor of gene transcription, capable of modulating two distinct regulatory programs during neural development. Has a role in olfactory behavior.::Drosophila melanogaster (taxid: 7227) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.48::91-145 PF00157::Pou 100.00::8-71 GO:0050911::detection of chemical stimulus involved in sensory perception of smell very confident hh_2xsd_C_1::8-31,34-34,36-77,81-145 very confident psy1904 163 Q28DP6::Paired box protein Pax-3 ::Probable transcription factor. Promotes both hatching gland and neural crest cell fates, two of the cell populations that arise from the neural plate border. Acts downstream of msx1 to induce the neural crest, cooperating with zic1 and mediating signals from both the wnt and fgf8 signaling pathways. Induction of hatching gland cell fate is independent of zic1.::Xenopus tropicalis (taxid: 8364) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.54::98-156 PF00292::PAX 99.93::1-90 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity confident bp_1pdn_C_1::1-88 very confident psy15437 143 Q9JKU8::LIM homeobox transcription factor 1-alpha ::Acts as a transcriptional activator by binding to an A/T-rich sequence, the FLAT element, in the insulin gene promoter. Required for development of the roof plate and, in turn, for specification of dorsal cell fates in the CNS and developing vertebrae.::Mus musculus (taxid: 10090) confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.54::84-142 PF00412::LIM 99.60::7-65 GO:0001764::neuron migration confident hh_2rgt_A_1::2-67,86-119 very confident psy10849 267 Q9JKU8::LIM homeobox transcription factor 1-alpha ::Acts as a transcriptional activator by binding to an A/T-rich sequence, the FLAT element, in the insulin gene promoter. Required for development of the roof plate and, in turn, for specification of dorsal cell fates in the CNS and developing vertebrae.::Mus musculus (taxid: 10090) portable COG5576::Homeodomain-containing transcription factor [Transcription] 99.38::100-163 PF00412::LIM 99.46::22-80 GO:0006355::regulation of transcription, DNA-dependent confident hh_2rgt_A_1::2-84,102-102,104-135 very confident psy17504 196 P29673::Protein apterous ::Required for the normal development of the wing and halter imaginal disks.::Drosophila melanogaster (taxid: 7227) portable COG5576::Homeodomain-containing transcription factor [Transcription] 97.64::150-195 PF00412::LIM 98.94::3-54 GO:0030154::cell differentiation confident hh_2rgt_A_1::2-54 very confident psy8980 355 P40427::Homeobox protein extradenticle ::Transcription factor which acts with the selector homeodomain proteins altering the regulation of downstream target genes such as wingless (wg), teashirt (tsh) and decapentaplegic (dpp), thus affecting segmental identity. Delimits the eye field and prevent inappropriate eye development. Required for proper localization of chordotonal organs within the peripheral nervous system.::Drosophila melanogaster (taxid: 7227) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.13::226-291 PF03792::PBC 100.00::29-226 GO:0001764::neuron migration very confident hh_1du6_A_1::226-288 very confident psy5541 301 Q7PMT1::Homeobox protein extradenticle ::Transcription factor which acts with the selector homeodomain proteins altering the regulation of downstream target genes such as wingless (wg), teashirt (tsh) and decapentaplegic (dpp), thus affecting segmental identity.::Anopheles gambiae (taxid: 7165) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.17::107-173 PF03792::PBC 99.69::16-106 GO:0005667::transcription factor complex very confident hh_3d1n_I_1::40-127,131-168 very confident psy10105 197 Q24248::Homeobox protein araucan ::Controls proneural and vein forming genes. Positive transcriptional controler of AC-SC (achaete-scute). May act as an activator that interacts with the transcriptional complex assembled on the AC and SC promoters and participates in transcription initiation.::Drosophila melanogaster (taxid: 7227) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.96::64-127 PF05920::Homeobox_KN 99.74::83-122 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity very confident hh_1du6_A_1::65-125 very confident psy10107 140 Q24248::Homeobox protein araucan ::Controls proneural and vein forming genes. Positive transcriptional controler of AC-SC (achaete-scute). May act as an activator that interacts with the transcriptional complex assembled on the AC and SC promoters and participates in transcription initiation.::Drosophila melanogaster (taxid: 7227) very confident COG5576::Homeodomain-containing transcription factor [Transcription] 99.11::6-67 PF05920::Homeobox_KN 99.79::22-61 GO:0009953::dorsal/ventral pattern formation very confident hh_1du6_A_1::6-64 very confident psy9533 73 Q50D79::Homeobox protein unc-4 homolog ::Transcription factor involved in somitogenesis and neurogenesis.::Danio rerio (taxid: 7955) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.30::2-20 no hit no match GO:0007389::pattern specification process confident hh_2dms_A_1::2-21 confident psy5731 159 Q24256::Homeobox protein B-H2 ::B-H1 and B-H2 are regulated by members of the wg signaling pathway; wg and dpp. B-H1 and B-H2 are coexpressed and functionally required in R1 and R6 receptor cells and primary pigment cells for normal eye development. Coexpression is also required for the fate determination of external sensory organs, formation of notal microchaetae, formation of presutural macrochaetae, antennal development and for distal leg morphogenesis; segmentation and specification of tarsal segments 3-5.::Drosophila melanogaster (taxid: 7227) confident COG5576::Homeodomain-containing transcription factor [Transcription] 94.49::1-21 no hit no match GO:0032502::developmental process confident hh_1uhs_A_1::1-15 portable psy5351 65 P78426::Homeobox protein Nkx-6.1 ::Transcription factor which binds to specific A/T-rich DNA sequences in the promoter regions of a number of genes. Involved in transcriptional regulation in islet beta cells. Binds to the insulin promoter and is involved in regulation of the insulin gene. Together with NKX2-2 and IRX3 acts to restrict the generation of motor neurons to the appropriate region of the neural tube. Belongs to the class II proteins of neuronal progenitor factors, which are induced by SHH signals.::Homo sapiens (taxid: 9606) confident COG5576::Homeodomain-containing transcription factor [Transcription] 98.47::2-23 no hit no match GO:0045686::negative regulation of glial cell differentiation confident no hit no match psy10481 129 Q8BK64::Activator of 90 kDa heat shock protein ATPase homolog 1 ::Co-chaperone that stimulates HSP90 ATPase activity. May affect a step in the endoplasmic reticulum to Golgi trafficking.::Mus musculus (taxid: 10090) confident COG5580::Activator of HSP90 ATPase [Posttranslational modification, protein turnover, chaperones] 99.96::19-113 PF09229::Aha1_N 100.00::29-125 GO:0051087::chaperone binding confident hh_1usu_B_1::15-125 very confident psy15512 786 Q6IFT6::Anoctamin-7 ::May act as a calcium-activated chloride channel. May play a role in cell-cell interactions.::Rattus norvegicus (taxid: 10116) confident COG5594::Uncharacterized integral membrane protein [Function unknown] 90.94::484-549 PF04547::Anoctamin 100.00::276-767 GO:0005229::intracellular calcium activated chloride channel activity confident rp_1vt4_I_1::3-7,10-28,40-116,119-160,162-173,177-180,183-228,231-240,243-252,263-280,282-286,293-335,337-347,355-376,380-415 portable psy7109 236 Q7T2P6::Mitochondrial import inner membrane translocase subunit Tim23 ::Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane (By similarity). Plays an essential role in early embryonic development.::Danio rerio (taxid: 7955) confident COG5596::TIM22 Mitochondrial import inner membrane translocase, subunit TIM22 [Posttranslational modification, protein turnover, chaperones] 99.79::45-224 PF02466::Tim17 99.90::49-223 GO:0005739::mitochondrion confident no hit no match psy7132 103 O35092::Mitochondrial import inner membrane translocase subunit Tim17-A ::Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.::Rattus norvegicus (taxid: 10116) confident COG5596::TIM22 Mitochondrial import inner membrane translocase, subunit TIM22 [Posttranslational modification, protein turnover, chaperones] 99.44::5-94 PF02466::Tim17 99.89::2-101 GO:0005744::mitochondrial inner membrane presequence translocase complex confident no hit no match psy13364 285 O35092::Mitochondrial import inner membrane translocase subunit Tim17-A ::Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.::Rattus norvegicus (taxid: 10116) confident COG5596::TIM22 Mitochondrial import inner membrane translocase, subunit TIM22 [Posttranslational modification, protein turnover, chaperones] 99.57::138-281 PF02466::Tim17 99.89::162-283 GO:0005744::mitochondrial inner membrane presequence translocase complex confident no hit no match psy4351 62 Q06180::Tyrosine-protein phosphatase non-receptor type 2 ::::Mus musculus (taxid: 10090) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 98.61::14-47 PF00102::Y_phosphatase 98.75::10-44 GO:0005783::endoplasmic reticulum confident hh_2cm2_A_1::3-51 very confident psy5452 89 P35831::Tyrosine-protein phosphatase non-receptor type 12 ::Dephosphorylates cellular tyrosine kinases, including PTK2B/PYK2, and thereby regulates signaling via PTK2B/PYK2.::Mus musculus (taxid: 10090) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 99.85::6-79 PF00102::Y_phosphatase 99.84::5-75 GO:0005829::cytosol confident hh_2oc3_A_1::5-82 very confident psy4348 355 Q06180::Tyrosine-protein phosphatase non-receptor type 2 ::::Mus musculus (taxid: 10090) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::42-288 PF00102::Y_phosphatase 100.00::49-284 GO:0005829::cytosol confident hh_2cm2_A_1::8-38,41-291 very confident psy15337 93 B2RU80::Receptor-type tyrosine-protein phosphatase beta ::Plays an important role in blood vessel remodeling and angiogenesis. Not necessary for the initial formation of blood vessels, but is essential for their maintenance and remodeling. Can induce dephosphorylation of TEK/TIE2, CDH5/VE-cadherin and KDR/VEGFR-2. Regulates angiopoietin-TIE2 signaling in endothelial cells. Acts as a negative regulator of TIE2, and controls TIE2 driven endothelial cell proliferation, which in turn affects blood vessel remodeling during embryonic development and determines blood vessel size during perinatal growth. Essential for the maintenance of endothelial cell contact integrity and for the adhesive function of VE-cadherin in endothelial cells and this requires the presence of plakoglobin.::Mus musculus (taxid: 10090) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 99.78::1-68 PF00102::Y_phosphatase 99.81::1-66 GO:0007156::homophilic cell adhesion confident hh_2ooq_A_1::1-29,33-71 very confident psy8773 1773 P16621::Tyrosine-protein phosphatase Lar ::Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase). It controls motor axon guidance.::Drosophila melanogaster (taxid: 7227) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::232-485 PF00102::Y_phosphatase 100.00::241-483 GO:0007157::heterophilic cell-cell adhesion confident hh_1lar_A_2::733-916,928-1006,1226-1260,1310-1402,1504-1646,1650-1662 very confident psy7503 2713 Q62656::Receptor-type tyrosine-protein phosphatase zeta ::Phosphacan, previously designated 3F8 chondroitin sulfate proteoglycan or 3H1 keratan sulfate proteoglycan depending on the glycosylation status, is a soluble nervous tissue-specific proteoglycan. It is synthesized by glia and binds to neurons and to the neural cell adhesion molecules tenascin, N-CAM or NG-CAM but not to laminin and fibronectin. Phosphacan acts as a potent inhibitor of cell adhesion and neurite outgrowth.::Rattus norvegicus (taxid: 10116) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::3-236 PF00102::Y_phosphatase 100.00::7-229 GO:0019898::extrinsic to membrane confident hh_2oc3_A_1::3-29,32-97,99-129,132-150,156-175,177-227 very confident psy12348 178 P35992::Tyrosine-protein phosphatase 10D ::May have a role in axon outgrowth and guidance.::Drosophila melanogaster (taxid: 7227) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::7-178 PF00102::Y_phosphatase 100.00::8-178 GO:0030336::negative regulation of cell migration confident hh_2oc3_A_1::8-88,90-178 very confident psy15394 523 Q641Z2::Tyrosine-protein phosphatase non-receptor type 9 ::Protein-tyrosine phosphatase that could participate in the transfer of hydrophobic ligands or in functions of the Golgi apparatus.::Rattus norvegicus (taxid: 10116) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::96-353 PF00102::Y_phosphatase 100.00::105-351 GO:0030336::negative regulation of cell migration confident hh_1yfo_A_1::61-197,199-199,201-269,283-355 very confident psy15334 451 P35992::Tyrosine-protein phosphatase 10D ::May have a role in axon outgrowth and guidance.::Drosophila melanogaster (taxid: 7227) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::182-426 PF00102::Y_phosphatase 100.00::190-423 GO:0031323::regulation of cellular metabolic process confident hh_3i36_A_1::146-214,216-283,285-385,389-439 very confident psy12349 205 P35992::Tyrosine-protein phosphatase 10D ::May have a role in axon outgrowth and guidance.::Drosophila melanogaster (taxid: 7227) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 99.90::40-158 PF00102::Y_phosphatase 99.96::13-155 GO:0031323::regulation of cellular metabolic process confident hh_2oc3_A_1::13-160 very confident psy17835 702 A2ALK8::Tyrosine-protein phosphatase non-receptor type 3 ::May act at junctions between the membrane and the cytoskeleton.::Mus musculus (taxid: 10090) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::512-702 PF00102::Y_phosphatase 100.00::521-702 GO:0035335::peptidyl-tyrosine dephosphorylation confident hh_2i75_A_1::494-542,545-622,625-637,640-702 very confident psy10360 380 Q62136::Tyrosine-protein phosphatase non-receptor type 21 ::May be involved in the regulation of growth and differentiation of liver cells.::Mus musculus (taxid: 10090) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::4-373 PF00102::Y_phosphatase 100.00::10-367 GO:0035335::peptidyl-tyrosine dephosphorylation confident hh_2oc3_A_1::6-35,38-55,57-83,168-190,225-254,257-295,300-374 very confident psy4951 1189 P35992::Tyrosine-protein phosphatase 10D ::May have a role in axon outgrowth and guidance.::Drosophila melanogaster (taxid: 7227) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 99.83::1044-1152 PF00102::Y_phosphatase 99.64::1097-1149 GO:0045177::apical part of cell confident hh_3s3e_A_1::1001-1155 very confident psy8516 451 P35235::Tyrosine-protein phosphatase non-receptor type 11 ::Acts downstream of various receptor and cytoplasmic protein tyrosine kinases to participate in the signal transduction from the cell surface to the nucleus. Dephosphorylates ROCK2 at Tyr-722 resulting in stimulatation of its RhoA binding activity.::Mus musculus (taxid: 10090) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::273-444 PF00102::Y_phosphatase 100.00::282-445 GO:0048013::ephrin receptor signaling pathway confident hh_2shp_A_1::1-130,154-447 very confident psy8517 614 P35235::Tyrosine-protein phosphatase non-receptor type 11 ::Acts downstream of various receptor and cytoplasmic protein tyrosine kinases to participate in the signal transduction from the cell surface to the nucleus. Dephosphorylates ROCK2 at Tyr-722 resulting in stimulatation of its RhoA binding activity.::Mus musculus (taxid: 10090) confident COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::383-582 PF00102::Y_phosphatase 99.98::388-553 GO:0048013::ephrin receptor signaling pathway confident hh_2shp_A_1::242-547,550-563,566-573 very confident psy13252 558 P23470::Receptor-type tyrosine-protein phosphatase gamma ::Possesses tyrosine phosphatase activity.::Homo sapiens (taxid: 9606) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 100.00::69-324 PF00102::Y_phosphatase 100.00::76-323 GO:0048699::generation of neurons confident hh_2oc3_A_1::30-169,171-200,206-274,281-284,286-289,292-324 very confident psy3114 515 Q9H4B6::Protein salvador homolog 1 ::Regulator of STK3/MST2 and STK4/MST1 in the Hippo signaling pathway which plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Phosphorylation of YAP1 by LATS1/2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell death, and cell migration. SAV1 is required for STK3/MST2 and STK4/MST1 activation and promotes cell-cycle exit and terminal differentiation in developing epithelial tissues. Plays a role in centrosome disjunction by regulating the localization of NEK2 to centrosomes, and its ability to phosphorylate CROCC and CEP250. In conjunction with STK3/MST2, activates the transcriptional activity of ESR1 through the modulation of its phosphorylation.::Homo sapiens (taxid: 9606) portable COG5599::PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] 99.79::11-170 PF00782::DSPc 99.73::51-169 GO:0005634::nucleus confident hh_1ohe_A_1::1-38,44-54,56-177 very confident psy11709 474 Q7Q068::Eukaryotic translation initiation factor 3 subunit M ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) confident COG5600::Transcription-associated recombination protein [DNA replication, recombination, and repair] 92.41::105-347 PF01399::PCI 98.89::257-347 GO:0005829::cytosol confident hh_3chm_A_1::222-281,289-291,293-347 very confident psy9817 231 O61470::Probable 26S proteasome non-ATPase regulatory subunit 3 ::Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Anopheles gambiae (taxid: 7165) confident COG5600::Transcription-associated recombination protein [DNA replication, recombination, and repair] 99.96::53-222 PF01399::PCI 98.55::168-231 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_4b4t_S_1::2-231 very confident psy9768 406 Q8BFV2::PCI domain-containing protein 2 ::Required for B-cell survival through the regulation of the expression of cell-cycle checkpoint MAD2L1 protein during B cell differentiation.::Mus musculus (taxid: 10090) very confident COG5600::Transcription-associated recombination protein [DNA replication, recombination, and repair] 100.00::5-400 PF01399::PCI 99.59::282-392 GO:0043488::regulation of mRNA stability very confident hh_3t5x_A_1::203-403 very confident psy1676 343 O61470::Probable 26S proteasome non-ATPase regulatory subunit 3 ::Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Anopheles gambiae (taxid: 7165) very confident COG5600::Transcription-associated recombination protein [DNA replication, recombination, and repair] 99.98::30-284 PF08375::Rpn3_C 99.95::274-341 GO:0005829::cytosol confident hh_4b4t_S_1::2-336 very confident psy3869 203 Q60520::Paired amphipathic helix protein Sin3a ::Acts as a transcriptional repressor. Corepressor for REST. Interacts with MXI1 to repress MYC responsive genes and antagonize MYC oncogenic activities. Also interacts with MXD1-MAX heterodimers to repress transcription by tethering SIN3A to DNA. Acts cooperatively with OGT to repress transcription in parallel with histone deacetylation.::Mus musculus (taxid: 10090) portable COG5602::SIN3 Histone deacetylase complex, SIN3 component [Chromatin structure and dynamics] 99.94::1-183 no hit no match GO:0017053::transcriptional repressor complex confident no hit no match psy3870 203 Q60520::Paired amphipathic helix protein Sin3a ::Acts as a transcriptional repressor. Corepressor for REST. Interacts with MXI1 to repress MYC responsive genes and antagonize MYC oncogenic activities. Also interacts with MXD1-MAX heterodimers to repress transcription by tethering SIN3A to DNA. Acts cooperatively with OGT to repress transcription in parallel with histone deacetylation.::Mus musculus (taxid: 10090) portable COG5602::SIN3 Histone deacetylase complex, SIN3 component [Chromatin structure and dynamics] 99.94::1-183 no hit no match GO:0017053::transcriptional repressor complex confident no hit no match psy84 2182 Q6P9H4::Connector enhancer of kinase suppressor of ras 3 ::Probably involved in transepithelial sodium transport. Regulates aldosterone-induced and ENaC-mediated sodium transport possibly through regulation of the ERK pathway.::Homo sapiens (taxid: 9606) portable COG5603::TRS20 Subunit of TRAPP, an ER-Golgi tethering complex [Cell motility and secretion] 99.90::1033-1157 PF04628::Sedlin_N 99.93::1037-1157 GO:0005737::cytoplasm confident hh_2j3w_A_1::1029-1156 very confident psy3409 139 Q3T0F2::Trafficking protein particle complex subunit 2 ::Prevents ENO1-mediated transcriptional repression and antagonizes ENO1-mediated cell death. May play a role in vesicular transport from endoplasmic reticulum to Golgi.::Bos taurus (taxid: 9913) very confident COG5603::TRS20 Subunit of TRAPP, an ER-Golgi tethering complex [Cell motility and secretion] 100.00::6-136 PF04628::Sedlin_N 100.00::9-134 GO:0006355::regulation of transcription, DNA-dependent very confident hh_2j3w_A_1::1-138 very confident psy2946 455 Q7QJW7::Protein CLP1 homolog ::Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation.::Anopheles gambiae (taxid: 7165) very confident COG5623::CLP1 Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis] 100.00::9-422 PF06807::Clp1 99.97::231-423 GO:0000214::tRNA-intron endonuclease complex very confident hh_2npi_A_1::4-52,54-72,74-103,108-137,141-332,335-338,341-342,349-422 very confident psy14441 365 Q8VE65::Transcription initiation factor TFIID subunit 12 ::TAFs are components of the transcription factor IID (TFIID) complex, PCAF histone acetylase complex and TBP-free TAFII complex (TFTC). TAFs components-TIIFD are essential for mediating regulation of RNA polymerase transcription.::Mus musculus (taxid: 10090) confident COG5624::TAF61 Transcription initiation factor TFIID, subunit TAF12 (also component of histone acetyltransferase SAGA) [Transcription] 99.93::256-360 PF03847::TFIID_20kDa 99.96::262-329 GO:0033276::transcription factor TFTC complex confident hh_1h3o_B_1::256-331 very confident psy8140 108 O75925::E3 SUMO-protein ligase PIAS1 ::Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase, stabilizing the interaction between UBE2I and the substrate, and as a SUMO-tethering factor. Plays a crucial role as a transcriptional coregulation in various cellular pathways, including the STAT pathway, the p53 pathway and the steroid hormone signaling pathway. In vitro, binds A/T-rich DNA. The effects of this transcriptional coregulation, transactivation or silencing, may vary depending upon the biological context. Together with PRMT1, may repress STAT1 transcriptional activity, in the late phase of interferon gamma (IFN-gamma) signaling.::Homo sapiens (taxid: 9606) confident COG5627::MMS21 DNA repair protein MMS21 [DNA replication, recombination, and repair] 98.16::31-101 PF02891::zf-MIZ 99.93::40-89 GO:0033235::positive regulation of protein sumoylation confident hh_4fo9_A_1::4-106 very confident psy7101 130 Q06344::Pre-rRNA-processing protein ESF1 ::Involved in the 18S rRNA synthesis. Required for the early cleavages at sites A0, A1 and A2.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident COG5638::Uncharacterized conserved protein [Function unknown] 100.00::22-119 PF00076::RRM_1 92.23::43-72 GO:0005829::cytosol confident hh_3p8c_A_1::53-91,94-101,103-130 very confident psy12782 203 P03951::Coagulation factor XI ::Factor XI triggers the middle phase of the intrinsic pathway of blood coagulation by activating factor IX.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.85::9-200 PF00089::Trypsin 99.96::7-194 GO:0004175::endopeptidase activity confident hh_1eq9_A_1::7-21,27-43,46-98,100-122,129-139,141-159,164-177,179-200 very confident psy8978 252 P00766::Chymotrypsinogen A ::::Bos taurus (taxid: 9913) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 100.00::7-251 PF00089::Trypsin 100.00::11-245 GO:0005509::calcium ion binding confident hh_1eq9_A_1::11-31,34-59,67-81,86-179,182-191,193-211,217-250 very confident psy285 842 O60235::Transmembrane protease serine 11D ::May play some biological role in the host defense system on the mucous membrane independently of or in cooperation with other substances in airway mucous or bronchial secretions.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.85::207-404 PF00089::Trypsin 99.94::428-659 GO:0005576::extracellular region confident hh_1eq9_A_1::428-476,492-542,546-586,589-615,618-618,625-625,628-641,643-644,646-664 very confident psy15989 363 P00734::Prothrombin ::Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.94::15-257 PF00089::Trypsin 99.97::20-256 GO:0005576::extracellular region confident hh_1eq9_A_1::20-41,46-70,76-90,96-147,155-161,163-173,176-221,226-234,240-240,242-256 very confident psy10089 559 P69525::Transmembrane protease serine 9 ::Serase-1 and serase-2 are serine proteases that hydrolyze the peptides N-t-Boc-Gln-Ala-Arg-AMC and N-t-Boc-Gln-Gly-Arg-AMC. In contrast, N-t-Boc-Ala-Phe-Lys-AMC and N-t-Boc-Ala-Pro-Ala-AMC are not significantly hydrolyzed.::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.98::284-552 PF00089::Trypsin 100.00::288-542 GO:0005576::extracellular region confident hh_2b9l_A_1::285-292,297-315,318-365,370-557 very confident psy4294 238 P06868::Plasminogen ::Plasmin dissolves the fibrin of blood clots and acts as a proteolytic factor in a variety of other processes including embryonic development, tissue remodeling, tumor invasion, and inflammation. In ovulation, weakens the walls of the Graafian follicle. It activates the urokinase-type plasminogen activator, collagenases and several complement zymogens, such as C1 and C5. Cleavage of fibronectin and laminin leads to cell detachment and apoptosis. Also cleaves fibrin, thrombospondin and von Willebrand factor. Its role in tissue remodeling and tumor invasion may be modulated by CSPG4. Binds to cells.::Bos taurus (taxid: 9913) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.88::17-225 PF00089::Trypsin 99.96::21-206 GO:0005615::extracellular space confident hh_1eq9_A_1::21-67,71-91,97-135,145-146,148-212 very confident psy10841 286 P98159::Serine protease nudel ::Component of the extracellular signaling pathway that establishes the dorsal-ventral pathway of the embryo. Three proteases; ndl, gd and snk process easter to create active easter. Active easter defines cell identities along the dorsal-ventral continuum by activating the spz ligand for the Tl receptor in the ventral region of the embryo. Nudel, pipe and windbeutel together trigger the protease cascade within the extraembryonic perivitelline compartment which induces dorsoventral polarity of the Drosophila embryo.::Drosophila melanogaster (taxid: 7227) confident COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.97::43-277 PF00089::Trypsin 100.00::46-270 GO:0005615::extracellular space confident hh_2f9n_A_1::46-107,111-211,214-232,236-276 very confident psy12777 697 Q0IIH7::Suppressor of tumorigenicity 14 protein homolog ::Degrades extracellular matrix. Proposed to play a role in breast cancer invasion and metastasis. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.::Bos taurus (taxid: 9913) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.77::388-496 PF00089::Trypsin 99.96::391-695 GO:0005615::extracellular space confident hh_1eq9_A_1::391-410,415-456,462-528,637-661,666-666,669-679,681-695 very confident psy6524 457 Q90628::Trypsin I-P38 ::::Gallus gallus (taxid: 9031) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.95::360-451 PF00089::Trypsin 100.00::30-445 GO:0005615::extracellular space confident hh_1hj8_A_1::30-49,51-73,78-94,201-249,251-272,358-377,380-410,415-451 very confident psy7305 258 no hit no match COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 100.00::14-258 PF00089::Trypsin 100.00::18-253 GO:0005615::extracellular space very confident hh_1eq9_A_1::18-38,43-68,73-90,96-139,143-146,149-186,189-198,200-218,223-236,238-258 very confident psy2950 406 P69525::Transmembrane protease serine 9 ::Serase-1 and serase-2 are serine proteases that hydrolyze the peptides N-t-Boc-Gln-Ala-Arg-AMC and N-t-Boc-Gln-Gly-Arg-AMC. In contrast, N-t-Boc-Ala-Phe-Lys-AMC and N-t-Boc-Ala-Pro-Ala-AMC are not significantly hydrolyzed.::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.90::4-249 PF00089::Trypsin 99.96::7-212 GO:0005789::endoplasmic reticulum membrane confident hh_1eq9_A_1::7-84,99-99,101-139,146-156,158-176,182-195,197-217 very confident psy15063 417 Q9Y5Y6::Suppressor of tumorigenicity 14 protein ::Degrades extracellular matrix. Proposed to play a role in breast cancer invasion and metastasis. Exhibits trypsin-like activity as defined by cleavage of synthetic substrates with Arg or Lys as the P1 site.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.95::101-414 PF00089::Trypsin 100.00::105-409 GO:0008233::peptidase activity confident hh_1eq9_A_1::105-114,118-143,147-154,158-173,178-246,248-270,273-292,363-370,373-374,377-385,387-390,393-414 very confident psy1243 121 P05981::Serine protease hepsin ::Plays an essential role in cell growth and maintenance of cell morphology.::Homo sapiens (taxid: 9606) confident COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.02::14-103 PF00089::Trypsin 99.06::12-99 GO:0009893::positive regulation of metabolic process confident rp_2psx_A_1::4-31,34-47,49-70 very confident psy15292 132 P04070::Vitamin K-dependent protein C ::Protein C is a vitamin K-dependent serine protease that regulates blood coagulation by inactivating factors Va and VIIIa in the presence of calcium ions and phospholipids.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 96.85::2-34 PF00089::Trypsin 99.31::2-122 GO:0010468::regulation of gene expression confident hh_3fzz_A_1::2-68,70-125 very confident psy6528 421 O60235::Transmembrane protease serine 11D ::May play some biological role in the host defense system on the mucous membrane independently of or in cooperation with other substances in airway mucous or bronchial secretions.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 100.00::66-305 PF00089::Trypsin 100.00::70-298 GO:0016021::integral to membrane confident hh_1eq9_A_1::70-131,135-183,185-226,228-228,232-242,244-262,268-281,283-304 very confident psy13815 388 P69525::Transmembrane protease serine 9 ::Serase-1 and serase-2 are serine proteases that hydrolyze the peptides N-t-Boc-Gln-Ala-Arg-AMC and N-t-Boc-Gln-Gly-Arg-AMC. In contrast, N-t-Boc-Ala-Phe-Lys-AMC and N-t-Boc-Ala-Pro-Ala-AMC are not significantly hydrolyzed.::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.98::113-386 PF00089::Trypsin 100.00::117-381 GO:0019897::extrinsic to plasma membrane confident hh_1eq9_A_1::117-162,166-182,184-254,258-279,286-296,298-304,335-346,351-364,366-387 very confident psy15291 295 Q7RTY7::Ovochymase-1 ::::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 100.00::52-293 PF00089::Trypsin 100.00::56-288 GO:0030163::protein catabolic process confident hh_1eq9_A_1::56-75,77-117,123-215,222-233,235-251,255-255,258-271,273-293 very confident psy16044 436 Q9DBI0::Transmembrane protease serine 6 ::Serine protease which hydrolyzes a range of proteins including type I collagen, fibronectin and fibrinogen. Can also activate urokinase-type plasminogen activator with low efficiency (By similarity). May play a specialized role in matrix remodeling processes in liver. Required to sense iron deficiency. Overexpression suppresses activation of the HAMP promoter.::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.96::23-270 PF00089::Trypsin 100.00::27-264 GO:0031638::zymogen activation confident hh_1eq9_A_1::27-48,55-78,83-99,103-135,137-152,155-196,201-211,213-229,233-233,236-269 very confident psy15052 422 Q05319::Serine proteinase stubble ::Hormone dependent protease required for epithelial morphogenesis, including the formation of bristles, legs, and wings. Has a dual function, detaches imaginal disk cells from extracellular matrices through its extracellular proteolytic domain and transmits an outside-to-inside signal to its intracellular domain to modify the cytoskeleton during morphogenesis.::Drosophila melanogaster (taxid: 7227) confident COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.97::131-380 PF00089::Trypsin 100.00::139-367 GO:0035807::positive regulation of blood coagulation in other organism confident hh_1eq9_A_1::139-196,202-294,301-311,313-331,337-350,352-372 very confident psy7167 897 Q9Y5Q5::Atrial natriuretic peptide-converting enzyme ::Isoform 2: has weaker endopeptidase activity compared to isoform 1.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.96::645-897 PF00089::Trypsin 100.00::649-888 GO:0043025::neuronal cell body confident hh_1eq9_A_1::649-669,672-697,700-714,718-736,738-770,772-789,792-815,820-830,832-849,855-855,858-871,873-894 very confident psy11546 1634 Q9Y5Q5::Atrial natriuretic peptide-converting enzyme ::Isoform 2: has weaker endopeptidase activity compared to isoform 1.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.93::1281-1531 PF00089::Trypsin 99.98::1285-1516 GO:0043025::neuronal cell body confident hh_4dgj_A_1::1285-1346,1348-1420,1422-1445,1449-1480,1482-1521 very confident psy12785 194 P40313::Chymotrypsin-like protease CTRL-1 ::::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.62::54-162 PF00089::Trypsin 99.89::60-176 GO:0043229::intracellular organelle confident hh_2b9l_A_1::8-11,13-28,30-35,37-52,54-142,145-178 very confident psy3170 525 Q86T26::Transmembrane protease serine 11B ::Probable serine protease.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.97::189-495 PF00089::Trypsin 100.00::192-484 GO:0043229::intracellular organelle confident hh_1eq9_A_1::279-314,316-317,320-339,342-391,393-416,418-427,429-446,453-467,469-489 very confident psy2626 355 Q8K1T0::Transmembrane protease serine 3 ::Probable serine protease that play a role in hearing. Acts as a permissive factor for cochlear hair cells survival and activation at the onset of hearing and is required for saccular hair cell survival. Activates ENaC (in vitro).::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 100.00::104-355 PF00089::Trypsin 100.00::108-350 GO:0043229::intracellular organelle confident hh_1eq9_A_1::108-129,139-162,165-180,183-233,238-279,285-296,298-315,320-333,335-355 very confident psy7307 117 no hit no match COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.07::21-87 PF00089::Trypsin 98.61::17-78 GO:0043229::intracellular organelle confident hh_2xrc_A_1::20-83 very confident psy7302 741 no hit no match COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.96::445-684 PF00089::Trypsin 100.00::448-683 GO:0043229::intracellular organelle confident hh_1z8g_A_1::434-440,444-468,470-512,517-612,614-614,618-662,711-738 very confident psy10445 425 P20231::Tryptase beta-2 ::Tryptase is the major neutral protease present in mast cells and is secreted upon the coupled activation-degranulation response of this cell type. Has an immunoprotective role during bacterial infection. Required to efficiently combat K.pneumoniae infection.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 100.00::186-423 PF00089::Trypsin 100.00::189-418 GO:0044425::membrane part confident hh_2f9n_A_1::189-235,237-255,260-425 very confident psy8662 260 Q9H3S3::Transmembrane protease serine 5 ::May play a role in hearing.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.94::83-258 PF00089::Trypsin 99.97::87-253 GO:0044469::envenomation resulting in positive regulation of blood coagulation in other organism confident hh_4dgj_A_1::87-258 very confident psy17330 184 P57727::Transmembrane protease serine 3 ::Probable serine protease that play a role in hearing. Acts as a permissive factor for cochlear hair cells survival and activation at the onset of hearing and is required for saccular hair cell survival (By similarity). Activates ENaC (in vitro).::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.75::5-184 PF00089::Trypsin 99.93::7-179 GO:0044699::single-organism process confident hh_1eq9_A_1::7-33,48-56,58-63,67-108,114-124,126-144,149-162,164-184 very confident psy12894 124 Q8NF86::Serine protease 33 ::Serine protease that has amidolytic activity, cleaving its substrates before Arg residues.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.24::44-122 PF00089::Trypsin 99.66::47-123 GO:0048523::negative regulation of cellular process confident hh_1eq9_A_1::47-123 very confident psy17339 384 P03952::Plasma kallikrein ::The enzyme cleaves Lys-Arg and Arg-Ser bonds. It activates, in a reciprocal reaction, factor XII after its binding to a negatively charged surface. It also releases bradykinin from HMW kininogen and may also play a role in the renin-angiotensin system by converting prorenin into renin.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 100.00::72-382 PF00089::Trypsin 100.00::76-374 GO:0050896::response to stimulus confident hh_1fxy_A_1::76-97,102-125,189-225,227-256,258-275,277-299,302-304,308-339,344-381 very confident psy17087 84 Q5U405::Transmembrane protease serine 13 ::::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.65::17-81 PF00089::Trypsin 99.47::11-76 GO:0050896::response to stimulus confident hh_1eq9_A_1::13-38,42-43,47-56,58-82 very confident psy17086 82 Q5U405::Transmembrane protease serine 13 ::::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.72::16-79 PF00089::Trypsin 99.49::10-74 GO:0050896::response to stimulus confident hh_1eq9_A_1::11-37,44-54,56-80 very confident psy8651 302 P0CW18::Putative serine protease 56 ::May play a role in eye development.::Homo sapiens (taxid: 9606) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.93::97-299 PF00089::Trypsin 99.97::101-297 GO:0070684::seminal clot liquefaction confident hh_1eq9_A_1::101-161,167-205,207-245,250-260,262-280,289-298 very confident psy8663 161 O70169::Inactive serine protease 39 ::May play an important role in the sperm/egg interaction; released during the acrosome reaction.::Mus musculus (taxid: 10090) portable COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 98.46::114-160 PF03761::DUF316 97.81::107-160 GO:0044464::cell part confident hh_2olg_A_1::105-160 very confident psy17085 826 P13681::Serine/threonine-protein phosphatase PP1-1 ::Essential role in cell cycle control. PP1 is perhaps required for exit from mitosis.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5640::Secreted trypsin-like serine protease [Posttranslational modification, protein turnover, chaperones] 99.50::235-418 PF11911::DUF3429 99.97::684-821 GO:0005829::cytosol confident hh_3e7a_A_1::4-225,230-256,258-274 very confident psy9606 356 P17429::Nitrogen regulatory protein areA ::Transcription activator that binds the consensus DNA element 5'-CGATAG-3' and mediates nitrogen metabolite repression. Activates the transcription of uapA.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG5641::GAT1 GATA Zn-finger-containing transcription factor [Transcription] 98.75::70-125 PF00320::GATA 99.34::76-110 GO:0003690::double-stranded DNA binding confident hh_1gnf_A_1::72-114 very confident psy8831 88 Q08DV0::Trans-acting T-cell-specific transcription factor GATA-3 ::Transcriptional activator which binds to the enhancer of the T-cell receptor alpha and delta genes. Binds to the consensus sequence 5'-AGATAG-3'.::Bos taurus (taxid: 9913) confident COG5641::GAT1 GATA Zn-finger-containing transcription factor [Transcription] 98.98::17-65 PF00320::GATA 99.62::20-53 GO:0045766::positive regulation of angiogenesis confident hh_4gat_A_1::14-71 very confident psy12567 142 P43691::Transcription factor GATA-4 (Fragment) ::Transcriptional activator. Binds to the consensus sequence 5'-AGATAG-3'.::Gallus gallus (taxid: 9031) confident COG5641::GAT1 GATA Zn-finger-containing transcription factor [Transcription] 98.95::77-137 PF00320::GATA 99.52::81-115 GO:0045944::positive regulation of transcription from RNA polymerase II promoter confident hh_4hc9_A_1::18-55,59-67,69-131 very confident psy8832 144 O94720::GATA zinc finger domain-containing protein C1393.08 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident COG5641::GAT1 GATA Zn-finger-containing transcription factor [Transcription] 99.16::37-140 PF00320::GATA 99.51::98-132 GO:0071773::cellular response to BMP stimulus confident hh_4hc9_A_1::36-84,89-141 very confident psy15323 139 Q08369::Transcription factor GATA-4 ::Transcriptional activator. Binds to the consensus sequence 5'-AGATAG-3'. Regulates the expression of the HSP47/J6 gene in F9 cells. Acts as a transcriptional activator of ANF in cooperation with NKX2-5. Promotes cardiac myocyte enlargement.::Mus musculus (taxid: 10090) confident COG5641::GAT1 GATA Zn-finger-containing transcription factor [Transcription] 99.29::8-104 PF00320::GATA 99.45::65-99 GO:0071773::cellular response to BMP stimulus very confident hh_4hc9_A_1::7-102,113-126 very confident psy14208 778 Q29425::Cullin-5 ::Core component of multiple SCF-like ECS (Elongin BC-Cullin 2/5-SOCS-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The functional specificity of the E3 ubiquitin-protein ligase complex depends on the variable substrate recognition component. ECS(SOCS1) seems to direct ubiquitination of JAk2. Seems to be involved poteosomal degradation of p53/TP53 stimulated by adenovirus E1B-55 kDa protein. May form a cell surface vasopressin receptor.::Oryctolagus cuniculus (taxid: 9986) very confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 100.00::5-778 PF00888::Cullin 100.00::14-671 GO:0005634::nucleus very confident hh_2wzk_A_1::1-119,128-254,256-385 very confident psy14846 615 Q29425::Cullin-5 ::Core component of multiple SCF-like ECS (Elongin BC-Cullin 2/5-SOCS-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The functional specificity of the E3 ubiquitin-protein ligase complex depends on the variable substrate recognition component. ECS(SOCS1) seems to direct ubiquitination of JAk2. Seems to be involved poteosomal degradation of p53/TP53 stimulated by adenovirus E1B-55 kDa protein. May form a cell surface vasopressin receptor.::Oryctolagus cuniculus (taxid: 9986) very confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 100.00::5-615 PF00888::Cullin 100.00::14-615 GO:0005634::nucleus confident hh_2wzk_A_1::1-119,128-254,256-384 very confident psy10549 103 Q9JLV5::Cullin-3 ::Core component of multiple cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit and is inhibited by the association of the deneddylated cullin subunit with TIP120A/CAND1 (By similarity). The functional specificity of the BCR complex depends on the BTB domain-containing protein as the susbstrate recognition component. BCR(SPOP) is involved in ubiquitination of BMI1/PCGF4, H2AFY and DAXX, and probably GLI2 or GLI3. BCR(KLHL9-KLHL13) controls the dynamic behavior of AURKB on mitotic chromosomes and thereby coordinates faithful mitotic progression and completion of cytokinesis. BCR(KLHL3) acts as a regulator of ion transport in the distal nephron; possibly by mediating ubiquitination of SLC12A3/NCC. Involved in ubiquitination of cyclin E and of cyclin D1 (in vitro) thus involved in regulation of G1/S transition (By similarity). BCR(KLHL12) is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division: BCR(KLHL12) acts by mediating monoubiquitination of SEC31 (SEC31A or SEC31B).::Mus musculus (taxid: 10090) confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 98.72::22-97 PF00888::Cullin 99.03::42-97 GO:0005794::Golgi apparatus confident bp_4eoz_B_1::32-97 very confident psy11818 331 Q9JLV5::Cullin-3 ::Core component of multiple cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complexes which mediate the ubiquitination and subsequent proteasomal degradation of target proteins. As a scaffold protein may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit and is inhibited by the association of the deneddylated cullin subunit with TIP120A/CAND1 (By similarity). The functional specificity of the BCR complex depends on the BTB domain-containing protein as the susbstrate recognition component. BCR(SPOP) is involved in ubiquitination of BMI1/PCGF4, H2AFY and DAXX, and probably GLI2 or GLI3. BCR(KLHL9-KLHL13) controls the dynamic behavior of AURKB on mitotic chromosomes and thereby coordinates faithful mitotic progression and completion of cytokinesis. BCR(KLHL3) acts as a regulator of ion transport in the distal nephron; possibly by mediating ubiquitination of SLC12A3/NCC. Involved in ubiquitination of cyclin E and of cyclin D1 (in vitro) thus involved in regulation of G1/S transition (By similarity). BCR(KLHL12) is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division: BCR(KLHL12) acts by mediating monoubiquitination of SEC31 (SEC31A or SEC31B).::Mus musculus (taxid: 10090) confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 100.00::4-286 PF00888::Cullin 99.91::17-193 GO:0005794::Golgi apparatus confident hh_1ldj_A_1::16-62,64-92,114-165,170-205,207-289 very confident psy16234 609 Q5RCF3::Cullin-2 ::Core component of multiple cullin-RING-based ECS (ElonginB/C-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination of target proteins. May serve as a rigid scaffold in the complex and may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit and is inhibited by the association of the deneddylated cullin subunit with TIP120A/CAND1 (By similarity). The functional specificity of the ECS complex depends on the substrate recognition component. ECS(VHL) mediates the ubiquitination of hypoxia-inducible factor (HIF).::Pongo abelii (taxid: 9601) confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 100.00::6-609 PF00888::Cullin 100.00::14-510 GO:0005829::cytosol confident hh_1ldj_A_1::10-358,360-365,367-389,392-609 very confident psy8359 279 Q8LGH4::Cullin-4 ::Component of the CUL4-RBX1-CDD (COP10-DDB1a-DET1) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Participates in the CDD complex to light-mediated control of development. May repress photomorphogenesis through enhancing COP1 E3 ubiquitin-protein ligase activity. Acts together with the CUL4-DDB1-COP1-SPA E3 ubiquitin-protein ligase complexes in the repression of photomorphogenesis and flowering time. Component ot the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protein ligase complex which mediates ubiquitination and subsequent degradation of AKIN10. Component of the CUL4-RBX1-DDB1-DWA1/DWA2 E3 ubiquitin-protein ligase complex that acts as negative regulator in abscisic acid (ABA) signaling and may target ABI5 for degradation.::Arabidopsis thaliana (taxid: 3702) confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 100.00::6-279 PF00888::Cullin 99.93::19-181 GO:0031465::Cul4B-RING ubiquitin ligase complex confident hh_2hye_C_1::19-279 very confident psy16237 133 Q5RCF3::Cullin-2 ::Core component of multiple cullin-RING-based ECS (ElonginB/C-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination of target proteins. May serve as a rigid scaffold in the complex and may contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit and is inhibited by the association of the deneddylated cullin subunit with TIP120A/CAND1 (By similarity). The functional specificity of the ECS complex depends on the substrate recognition component. ECS(VHL) mediates the ubiquitination of hypoxia-inducible factor (HIF).::Pongo abelii (taxid: 9601) confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 99.97::7-133 PF10557::Cullin_Nedd8 99.93::61-127 GO:0005829::cytosol confident hh_1iuy_A_1::47-133 very confident psy4179 89 Q5R4G6::Cullin-1 ::Core component of multiple cullin-RING-based SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complexes, which mediate the ubiquitination of proteins involved in cell cycle progression, signal transduction and transcription. In the SCF complex, serves as a rigid scaffold that organizes the SKP1-F-box protein and RBX1 subunits. May contribute to catalysis through positioning of the substrate and the ubiquitin-conjugating enzyme. The E3 ubiquitin-protein ligase activity of the complex is dependent on the neddylation of the cullin subunit and is inhibited by the association of the deneddylated cullin subunit with TIP120A/CAND1. The functional specificity of the SCF complex depends on the F-box protein as substrate recognition component. SCF(BTRC) and SCF(FBXW11) direct ubiquitination of CTNNB1 and participates in Wnt signaling. SCF(BTRC) and SCF(FBXW11) direct ubiquitination of phosphorylated NFKBIA. SCF(BTRC) directs ubiquitination of NFKBIB, NFKBIE, ATF4, SMAD3, SMAD4, CDC25A, FBXO5 and probably NFKB2. SCF(SKP2) directs ubiquitination of phosphorylated CDKN1B/p27kip and is involved in regulation of G1/S transition. SCF(SKP2) directs ubiquitination of ORC1, CDT1, RBL2, ELF4, CDKN1A, RAG2, FOXO1A, and probably MYC and TAL1. SCF(FBXW7) directs ubiquitination of cyclin E, NOTCH1 released notch intracellular domain (NICD), and probably PSEN1. SCF(FBXW2) directs ubiquitination of GCM1. SCF(FBXO32) directs ubiquitination of MYOD1. SCF(FBXO7) directs ubiquitination of BIRC2 and DLGAP5. SCF(FBXO33) directs ubiquitination of YBX1. SCF(FBXO11) does not seem to direct ubiquitination of TP53. SCF(BTRC) mediates the ubiquitination of NFKBIA at 'Lys-21' and 'Lys-22'; the degradation frees the associated NFKB1-RELA dimer to translocate into the nucleus and to activate transcription. SCF(Cyclin F) directs ubiquitination of CP110.::Pongo abelii (taxid: 9601) confident COG5647::Cullin, a subunit of E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones] 99.93::4-89 PF10557::Cullin_Nedd8 99.95::16-83 GO:0016477::cell migration confident hh_1ldj_A_1::2-89 very confident psy1990 382 Q5B995::Non-histone chromosomal protein 6 ::DNA-binding protein that induces severe bending of DNA. Required for DNA-binding by the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. Also augments the fidelity of transcription by RNA polymerase III independently of any role in the FACT complex.::Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.10::1-90 PF00505::HMG_box 98.95::46-93 GO:0003677::DNA binding confident hh_2crj_A_1::47-103 very confident psy1729 170 Q9DC33::High mobility group protein 20A ::Plays a role in neuronal differentiation as chromatin-associated protein. Acts as inhibitor of HMG20B. Overcomes the repressive effects of the neuronal silencer REST and induces the activation of neuronal-specific genes. Involved in the recruitment of the histone methyltransferase MLL and consequent increased methylation of histone H3 lysine 4.::Mus musculus (taxid: 10090) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.38::3-87 PF00505::HMG_box 98.81::4-51 GO:0003677::DNA binding confident hh_3tmm_A_1::4-93 very confident psy7578 280 Q9UGU5::HMG domain-containing protein 4 ::Negatively regulates Wnt/beta-catenin signaling during development.::Homo sapiens (taxid: 9606) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.68::64-140 PF00505::HMG_box 99.75::73-140 GO:0003677::DNA binding confident hh_1gt0_D_1::71-147 very confident psy14923 180 P40630::Transcription factor A, mitochondrial ::Isoform Mitochondrial binds to the mitochondrial light strand promoter and functions in mitochondrial transcription regulation. Required for accurate and efficient promoter recognition by the mitochondrial RNA polymerase. Promotes transcription initiation from the HSP1 and the light strand promoter by binding immediately upstream of transcriptional start sites. Is able to unwind and bend DNA. Required for maintenance of normal levels of mitochondrial DNA. May play a role in organizing and compacting mitochondrial DNA. Isoform Nuclear may also function as a transcriptional activator or may have a structural role in the compaction of nuclear DNA during spermatogenesis. Associates with mitochondrial DNA.::Mus musculus (taxid: 10090) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.82::37-121 PF00505::HMG_box 99.81::49-117 GO:0003690::double-stranded DNA binding confident hh_3tmm_A_1::43-176 very confident psy15634 113 A4QNG3::Transcription factor Sox-14 ::Acts as a negative regulator of transcription. May function as a switch in neuronal development.::Xenopus tropicalis (taxid: 8364) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.54::21-95 PF00505::HMG_box 99.68::30-91 GO:0005634::nucleus confident hh_1gt0_D_1::28-99 very confident psy5907 56 Q56A18::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Required for the coactivation of estrogen responsive promoters by Swi/Snf complexes and the SRC/p160 family of histone acetyltransferases (HATs). Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.::Rattus norvegicus (taxid: 10116) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.62::1-54 PF00505::HMG_box 99.78::1-54 GO:0005730::nucleolus very confident hh_3tmm_A_1::1-54 very confident psy1937 307 Q56A18::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Required for the coactivation of estrogen responsive promoters by Swi/Snf complexes and the SRC/p160 family of histone acetyltransferases (HATs). Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.::Rattus norvegicus (taxid: 10116) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.61::77-159 PF00505::HMG_box 99.64::88-155 GO:0005730::nucleolus confident hh_1k99_A_1::79-146 very confident psy5036 176 Q9YHE8::Transcription factor 7-like 1-A ::Participates in the Wnt signaling pathway. Probably binds to DNA and acts as a repressor in the absence of ctnnb1, and possibly as an activator in its presence. Required early in development for dorsal specific gene activation and during gastrulation for repression of dorsal-specific genes in the marginal zone. Required for head formation and forebrain specification. Regulates anterior-posterior patterning in the neuroectoderm by repressing posterior neural fates.::Danio rerio (taxid: 7955) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.43::57-132 PF00505::HMG_box 99.73::64-129 GO:0043234::protein complex confident hh_2lef_A_1::62-135,139-147 very confident psy3437 132 Q04888::Transcription factor SOX-10 ::Transcription factor that seems to function synergistically with the POU domain protein TST-1/OCT6/SCIP. Could confer cell specificity to the function of other transcription factors in developing and mature glia.::Mus musculus (taxid: 10090) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.23::1-85 PF00505::HMG_box 99.70::1-85 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_4euw_A_1::1-37,58-92 very confident psy16713 357 Q9U1H0::Putative transcription factor capicua ::Transcriptional repressor required for the specification of numerous cell types during embryonic development. Required for terminal patterning of early embryos. May associate with gro to repress tll and hkb, restricting their expression to embryonic terminal poles where they initiate correct development of head and tail structures. Required for dorsoventral patterning of oocytes and early embryos. Cooperates with dl to repress zen and other dorsal specific genes within the embryo and promotes expression of the ventralizing factor pip in ovarian follicle cells. Required during wing development for the specification of intervein areas, where it mediates localized repression of vein specific genes such as aos, dpp and vvl.::Drosophila melanogaster (taxid: 7227) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.58::61-138 PF00505::HMG_box 99.76::70-138 GO:0048523::negative regulation of cellular process confident hh_2gzk_A_1::19-139 very confident psy15636 101 A4QNG3::Transcription factor Sox-14 ::Acts as a negative regulator of transcription. May function as a switch in neuronal development.::Xenopus tropicalis (taxid: 8364) very confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.69::35-100 PF00505::HMG_box 99.80::44-101 GO:0051091::positive regulation of sequence-specific DNA binding transcription factor activity very confident hh_1gt0_D_1::42-101 very confident psy6707 257 B1H349::Transcription factor Sox-6 ::Transcriptional activator. Binds specifically to the DNA sequence 5'-AACAAT-3'. Plays a key role in several developmental processes, including neurogenesis and skeleton formation.::Xenopus tropicalis (taxid: 8364) portable COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.24::105-176 PF00505::HMG_box 99.50::113-176 GO:0051091::positive regulation of sequence-specific DNA binding transcription factor activity confident hh_4euw_A_1::102-119,122-184 very confident psy15633 129 Q6RVD7::Transcription factor Sox-21-B ::Acts as a negative regulator of transcription.::Danio rerio (taxid: 7955) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.76::15-93 PF00505::HMG_box 99.86::24-92 GO:0051091::positive regulation of sequence-specific DNA binding transcription factor activity very confident hh_1gt0_D_1::22-100 very confident psy12430 146 B1H349::Transcription factor Sox-6 ::Transcriptional activator. Binds specifically to the DNA sequence 5'-AACAAT-3'. Plays a key role in several developmental processes, including neurogenesis and skeleton formation.::Xenopus tropicalis (taxid: 8364) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.55::1-65 PF00505::HMG_box 99.77::1-65 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident bp_1i11_A_1::1-73 very confident psy5107 74 P40656::Putative transcription factor SOX-14 ::::Drosophila melanogaster (taxid: 7227) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.76::9-72 PF00505::HMG_box 99.77::18-72 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4euw_A_1::10-72 very confident psy14249 60 Q9H6I2::Transcription factor SOX-17 ::Acts as transcription regulator that binds target promoter DNA and bends the DNA. Binds to the sequences 5'-AACAAT-'3 or 5'-AACAAAG-3'. Modulates transcriptional regulation via WNT3A. Inhibits Wnt signaling. Promotes degradation of activated CTNNB1. Plays a key role in the regulation of embryonic development. Required for normal looping of the embryonic heart tube. Required for normal development of the definitive gut endoderm. Probable transcriptional activator in the premeiotic germ cells.::Homo sapiens (taxid: 9606) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.66::7-59 PF00505::HMG_box 99.72::15-59 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4a3n_A_1::13-59 very confident psy3264 156 Q24537::High mobility group protein DSP1 ::Binds preferentially single-stranded DNA and unwinds double stranded DNA.::Drosophila melanogaster (taxid: 7227) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.93::3-136 PF09011::HMG_box_2 99.80::6-78 GO:0003690::double-stranded DNA binding confident hh_2eqz_A_1::1-79 very confident psy3267 105 P17741::High mobility group protein B2 ::DNA binding proteins that associates with chromatin and has the ability to bend DNA. Binds preferentially single-stranded DNA. Involved in V(D)J recombination by acting as a cofactor of the RAG complex. Acts by stimulating cleavage and RAG protein binding at the 23 bp spacer of conserved recombination signal sequences (RSS).::Sus scrofa (taxid: 9823) confident COG5648::NHP6B Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics] 99.76::1-95 PF09011::HMG_box_2 99.44::2-55 GO:0045654::positive regulation of megakaryocyte differentiation confident hh_2eqz_A_1::1-53 very confident psy3610 366 A3LTB7::Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase ::Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.::Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (taxid: 322104) confident COG5650::Predicted integral membrane protein [Function unknown] 96.40::105-239 PF05208::ALG3 100.00::3-340 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy10442 430 Q8CHJ1::Phosphatidylinositol glycan anchor biosynthesis class U protein ::Component of the GPI transamidase complex. May be involved in the recognition of either the GPI attachment signal or the lipid portion of GPI.::Rattus norvegicus (taxid: 10116) confident COG5650::Predicted integral membrane protein [Function unknown] 97.17::151-257 PF06728::PIG-U 100.00::11-390 GO:0046425::regulation of JAK-STAT cascade confident no hit no match psy9993 605 Q7D7A1::Uncharacterized PPE family protein PPE40 ::::Mycobacterium tuberculosis (taxid: 1773) confident COG5651::PPE-repeat proteins [Cell motility and secretion] 99.19::113-159 no hit no match GO:0052553::modulation by symbiont of host immune response confident rp_3g06_A_1::247-585 confident psy9906 191 Q8BFY9::Transportin-1 ::Functions in nuclear protein import as nuclear transport receptor. Serves as receptor for nuclear localization signals (NLS) in cargo substrates. Is thought to mediate docking of the importin/substrate complex to the nuclear pore complex (NPC) through binding to nucleoporin and the complex is subsequently translocated through the pore by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to the importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus (By similarity). Involved in nuclear import of M9-containing proteins. In vitro, binds directly to the M9 region of the heterogeneous nuclear ribonucleoproteins (hnRNP), A1 and A2 and mediates their nuclear import. Appears also to be involved in hnRNP A1/A2 nuclear export. Mediates the nuclear import of ribosomal proteins RPL23A, RPS7 and RPL5. Binds to a beta-like import receptor binding (BIB) domain of RPL23A (By similarity). In vitro, mediates nuclear import of SRP19 (By similarity) and H2A, H2B, H3 and H4 histones.::Mus musculus (taxid: 10090) confident COG5656::SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] 99.82::11-156 PF03810::IBN_N 99.60::31-98 GO:0005829::cytosol confident hh_4fdd_A_1::1-179 very confident psy9795 337 Q7SZC2::Exportin-2 ::Export receptor for importin alpha. Mediates importin-alpha re-export from the nucleus to the cytoplasm after import substrates have been released into the nucleoplasm.::Danio rerio (taxid: 7955) confident COG5656::SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] 100.00::32-311 PF08506::Cse1 99.80::183-328 GO:0005634::nucleus confident hh_1wa5_C_1::37-52,55-106,108-281 very confident psy3383 161 O95373::Importin-7 ::Functions in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with the importin-beta subunit KPNB1. Acting autonomously, is thought to serve itself as receptor for nuclear localization signals (NLS) and to promote translocation of import substrates through the nuclear pore complex (NPC) by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Mediates autonomously the nuclear import of ribosomal proteins RPL23A, RPS7 and RPL5. Binds to a beta-like import receptor binding (BIB) domain of RPL23A. In association with KPNB1 mediates the nuclear import of H1 histone and the Ran-binding site of IPO7 is not required but synergizes with that of KPNB1 in importin/substrate complex dissociation. In vitro, mediates nuclear import of H2A, H2B, H3 and H4 histones. In vitro, mediates the nuclear import of HIV-1 reverse transcription complex (RTC) integrase. In case of HIV-1 infection, binds and mediates the nuclear import of HIV-1 Rev.::Homo sapiens (taxid: 9606) confident COG5656::SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] 100.00::2-157 PF08506::Cse1 100.00::1-157 GO:0042393::histone binding confident hh_1wa5_C_1::2-14,17-49,59-60,66-85,87-156 confident psy3385 99 O95373::Importin-7 ::Functions in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with the importin-beta subunit KPNB1. Acting autonomously, is thought to serve itself as receptor for nuclear localization signals (NLS) and to promote translocation of import substrates through the nuclear pore complex (NPC) by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Mediates autonomously the nuclear import of ribosomal proteins RPL23A, RPS7 and RPL5. Binds to a beta-like import receptor binding (BIB) domain of RPL23A. In association with KPNB1 mediates the nuclear import of H1 histone and the Ran-binding site of IPO7 is not required but synergizes with that of KPNB1 in importin/substrate complex dissociation. In vitro, mediates nuclear import of H2A, H2B, H3 and H4 histones. In vitro, mediates the nuclear import of HIV-1 reverse transcription complex (RTC) integrase. In case of HIV-1 infection, binds and mediates the nuclear import of HIV-1 Rev.::Homo sapiens (taxid: 9606) confident COG5656::SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] 99.74::35-99 PF08506::Cse1 98.70::35-99 GO:0042393::histone binding confident hh_1wa5_C_1::35-44,47-68,71-99 portable psy9800 486 Q7SZC2::Exportin-2 ::Export receptor for importin alpha. Mediates importin-alpha re-export from the nucleus to the cytoplasm after import substrates have been released into the nucleoplasm.::Danio rerio (taxid: 7955) portable COG5657::CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning] 100.00::7-484 PF03378::CAS_CSE1 100.00::117-486 GO:0005634::nucleus confident hh_1wa5_C_1::2-64,69-71,74-219,223-266,269-306,308-314,318-416,418-451,453-471,473-482 very confident psy16982 116 O95373::Importin-7 ::Functions in nuclear protein import, either by acting as autonomous nuclear transport receptor or as an adapter-like protein in association with the importin-beta subunit KPNB1. Acting autonomously, is thought to serve itself as receptor for nuclear localization signals (NLS) and to promote translocation of import substrates through the nuclear pore complex (NPC) by an energy requiring, Ran-dependent mechanism. At the nucleoplasmic side of the NPC, Ran binds to importin, the importin/substrate complex dissociates and importin is re-exported from the nucleus to the cytoplasm where GTP hydrolysis releases Ran. The directionality of nuclear import is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran between the cytoplasm and nucleus. Mediates autonomously the nuclear import of ribosomal proteins RPL23A, RPS7 and RPL5. Binds to a beta-like import receptor binding (BIB) domain of RPL23A. In association with KPNB1 mediates the nuclear import of H1 histone and the Ran-binding site of IPO7 is not required but synergizes with that of KPNB1 in importin/substrate complex dissociation. In vitro, mediates nuclear import of H2A, H2B, H3 and H4 histones. In vitro, mediates the nuclear import of HIV-1 reverse transcription complex (RTC) integrase. In case of HIV-1 infection, binds and mediates the nuclear import of HIV-1 Rev.::Homo sapiens (taxid: 9606) confident COG5657::CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning] 99.84::2-116 PF03810::IBN_N 99.26::2-58 GO:0042393::histone binding confident hh_1wa5_C_1::2-30,37-116 very confident psy4906 144 O75175::CCR4-NOT transcription complex subunit 3 ::The CCR4-NOT complex functions as general transcription regulation complex.::Homo sapiens (taxid: 9606) confident COG5665::NOT5 CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription] 100.00::13-143 PF04065::Not3 100.00::3-143 GO:0030014::CCR4-NOT complex confident no hit no match psy4337 174 O75175::CCR4-NOT transcription complex subunit 3 ::The CCR4-NOT complex functions as general transcription regulation complex.::Homo sapiens (taxid: 9606) confident COG5665::NOT5 CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription] 99.86::12-139 PF04065::Not3 100.00::12-142 GO:0030014::CCR4-NOT complex confident no hit no match psy4909 361 O75175::CCR4-NOT transcription complex subunit 3 ::The CCR4-NOT complex functions as general transcription regulation complex.::Homo sapiens (taxid: 9606) confident COG5665::NOT5 CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription] 100.00::224-359 PF04153::NOT2_3_5 100.00::226-356 GO:0030014::CCR4-NOT complex confident no hit no match psy6052 323 Q923Y8::Trace amine-associated receptor 1 ::Receptor for trace amines, including beta-phenylethylamine (b-PEA), p-tyramine (p-TYR), octopamine and tryptamine, with highest affinity for b-PEA and p-TYR. Unresponsive to classical biogenic amines, such as epinephrine and histamine and only partially activated by dopamine and serotonine. Trace amines are biogenic amines present in very low levels in mammalian tissues. Although some trace amines have clearly defined roles as neurotransmitters in invertebrates, the extent to which they function as true neurotransmitters in vertebrates has remained speculative. Trace amines are likely to be involved in a variety of physiological functions that have yet to be fully understood. The signal transduced by this receptor is mediated by the G(s)-class of G-proteins which activate adenylate cyclase.::Mus musculus (taxid: 10090) confident no hit no match PF00001::7tm_1 100.00::6-286 GO:0001594::trace-amine receptor activity confident hh_2ks9_A_1::2-53,59-64,66-104,107-138,143-146,149-157,161-206,214-305 very confident psy17035 60 Q868T3::Cardioacceleratory peptide receptor ::Binds to the cardioacceleratory peptide, which is a neuropeptide.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 98.83::2-50 GO:0001653::peptide receptor activity confident hh_3uon_A_1::2-23,27-60 very confident psy17031 419 Q868T3::Cardioacceleratory peptide receptor ::Binds to the cardioacceleratory peptide, which is a neuropeptide.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.94::111-409 GO:0001653::peptide receptor activity confident hh_3uon_A_1::92-160,232-320,324-356 very confident psy1006 239 Q60474::Alpha-2A adrenergic receptor ::Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate cyclase through the action of G proteins. Component of the ATAC complex, a complex with histone acetyltransferase activity on histones H3 and H4.::Cavia porcellus (taxid: 10141) confident no hit no match PF00001::7tm_1 99.89::102-238 GO:0004938::alpha2-adrenergic receptor activity confident bp_2rh1_A_1::109-225,228-237 very confident psy16861 382 O70528::5-hydroxytryptamine receptor 4 ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that stimulate adenylate cyclase.::Cavia porcellus (taxid: 10141) confident no hit no match PF00001::7tm_1 99.91::58-300 GO:0004989::octopamine receptor activity confident hh_3uon_A_1::38-179,181-188,192-235 very confident psy16677 227 O70528::5-hydroxytryptamine receptor 4 ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that stimulate adenylate cyclase.::Cavia porcellus (taxid: 10141) confident no hit no match PF00001::7tm_1 99.85::50-197 GO:0004989::octopamine receptor activity confident no hit no match psy1649 170 P18089::Alpha-2B adrenergic receptor ::Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate cyclase through the action of G proteins. The rank order of potency for agonists of this receptor is clonidine > norepinephrine > epinephrine = oxymetazoline > dopamine > p-tyramine = phenylephrine > serotonin > p-synephrine / p-octopamine. For antagonists, the rank order is yohimbine > chlorpromazine > phentolamine > mianserine > spiperone > prazosin > alprenolol > propanolol > pindolol.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 99.28::24-88 GO:0004989::octopamine receptor activity confident hh_3eml_A_1::26-111 very confident psy3689 151 P21917::D(4) dopamine receptor ::Dopamine receptor responsible for neuronal signaling in the mesolimbic system of the brain, an area of the brain that regulates emotion and complex behavior. Its activity is mediated by G proteins which inhibit adenylyl cyclase.::Homo sapiens (taxid: 9606) confident no hit no match PF00001::7tm_1 99.21::54-120 GO:0004989::octopamine receptor activity confident hh_3rze_A_1::56-93,96-140 very confident psy16862 303 Q4LBB6::Octopamine receptor beta-3R ::Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.93::58-242 GO:0004989::octopamine receptor activity confident no hit no match psy16678 87 Q9TT96::Beta-1 adrenergic receptor ::Beta-adrenergic receptors mediate the catecholamine-induced activation of adenylate cyclase through the action of G proteins. This receptor binds epinephrine and norepinephrine with approximately equal affinity.::Bos taurus (taxid: 9913) portable no hit no match PF00001::7tm_1 98.43::1-45 GO:0004989::octopamine receptor activity confident hh_2rh1_A_1::1-49 very confident psy3688 286 Q9VCZ3::Octopamine receptor beta-1R ::Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Octopamine does not cause Ca(2+) release in oa2-expressing cells.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.95::102-284 GO:0004989::octopamine receptor activity confident hh_2rh1_A_1::85-283 very confident psy9323 289 Q9VCZ3::Octopamine receptor beta-1R ::Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Octopamine does not cause Ca(2+) release in oa2-expressing cells.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.95::105-287 GO:0004989::octopamine receptor activity confident hh_2rh1_A_1::87-286 very confident psy16860 139 Q9VCZ3::Octopamine receptor beta-1R ::Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Octopamine does not cause Ca(2+) release in oa2-expressing cells.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.35::58-139 GO:0004989::octopamine receptor activity confident hh_3uon_A_1::41-130,132-139 very confident psy6892 190 P28223::5-hydroxytryptamine receptor 2A ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 98.70::31-94 GO:0006810::transport confident no hit no match psy4254 114 P90680::Opsin, blue-sensitive ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to 11-cis-retinal.::Apis mellifera (taxid: 7460) portable no hit no match PF00001::7tm_1 99.43::17-110 GO:0007165::signal transduction confident hh_2z73_A_1::17-113 very confident psy6681 537 P30730::Lutropin-choriogonadotropic hormone receptor ::Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase.::Mus musculus (taxid: 10090) portable no hit no match PF00001::7tm_1 100.00::3-250 GO:0007188::adenylate cyclase-modulating G-protein coupled receptor signaling pathway confident hh_2z73_A_1::1-49,58-268 very confident psy13963 402 P41596::Dopamine receptor 1 ::Receptor for dopamine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Might be involved in the processing of visual information and/or visual learning. Important for Pavlovian conditioning: required in the mushroom body as a receptor conveying unconditional stimuli information, has a role in memory formation for aversive and appetitive learning. Sleep-deprivation-induced impairments in learning can be partially explained through alterations in dopamine signaling, DopR expression levels are reduced; sleep may have a role in restoring dopamine homeostasis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 100.00::27-300 GO:0007191::adenylate cyclase-activating dopamine receptor signaling pathway confident hh_3uon_A_1::7-155,160-319 very confident psy6269 366 P18130::Alpha-1A adrenergic receptor ::This alpha-adrenergic receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. Its effect is mediated by G(q) and G(11) proteins.::Bos taurus (taxid: 9913) portable no hit no match PF00001::7tm_1 99.94::1-265 GO:0007210::serotonin receptor signaling pathway confident hh_3uon_A_1::1-48,50-240,242-265,306-309,314-334 very confident psy8280 158 P70536::Oxytocin receptor ::Receptor for oxytocin. The activity of this receptor is mediated by G proteins which activate a phosphatidylinositol-calcium second messenger system.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00001::7tm_1 99.70::48-150 GO:0007218::neuropeptide signaling pathway confident hh_3rze_A_1::30-61,67-105,107-152 very confident psy1135 124 Q5IS62::Neuropeptide Y receptor type 2 ::Receptor for neuropeptide Y and peptide YY.::Pan troglodytes (taxid: 9598) portable no hit no match PF00001::7tm_1 99.24::53-123 GO:0007218::neuropeptide signaling pathway confident hh_3rze_A_1::37-123 very confident psy4355 71 P28285::5-hydroxytryptamine receptor 2A ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins which inhibit adenylate cyclase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 98.99::18-67 GO:0008144::drug binding confident hh_3pbl_A_1::6-67 very confident psy2990 162 no hit no match no hit no match PF00001::7tm_1 99.34::75-162 GO:0008188::neuropeptide receptor activity confident hh_3uon_A_1::59-121,124-127,129-140,145-162 very confident psy2993 87 no hit no match no hit no match PF00001::7tm_1 98.33::6-62 GO:0008188::neuropeptide receptor activity confident hh_4grv_A_1::7-51,53-64 confident psy17210 132 O97512::Neuromedin-K receptor ::This is a receptor for the tachykinin neuropeptide neuromedin-K (neurokinin B). It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger system.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF00001::7tm_1 99.79::1-113 GO:0009605::response to external stimulus confident hh_2ks9_A_1::1-109 very confident psy11793 123 P90680::Opsin, blue-sensitive ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to 11-cis-retinal.::Apis mellifera (taxid: 7460) confident no hit no match PF00001::7tm_1 99.54::41-123 GO:0016021::integral to membrane confident hh_2z73_A_1::23-123 very confident psy7070 130 Q9UHM6::Melanopsin ::Photoreceptor required for regulation of circadian rhythm. Contributes to pupillar reflex and other non-image forming responses to light. May be able to isomerize covalently bound all-trans retinal back to 11-cis retinal.::Homo sapiens (taxid: 9606) confident no hit no match PF00001::7tm_1 98.97::15-110 GO:0016021::integral to membrane confident no hit no match psy3982 185 P28678::Opsin Rh1 ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF00001::7tm_1 99.68::11-143 GO:0016023::cytoplasmic membrane-bounded vesicle confident rp_2z73_A_1::4-77,79-181 very confident psy12169 263 Q17053::Rhodopsin, long-wavelength ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to 11-cis-retinal.::Apis mellifera (taxid: 7460) confident no hit no match PF00001::7tm_1 99.83::3-120 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2z73_A_1::4-135,140-195,197-208 very confident psy3981 276 Q17053::Rhodopsin, long-wavelength ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to 11-cis-retinal.::Apis mellifera (taxid: 7460) confident no hit no match PF00001::7tm_1 99.60::11-143 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2z73_A_1::5-75,77-150 very confident psy12172 84 Q17053::Rhodopsin, long-wavelength ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to 11-cis-retinal.::Apis mellifera (taxid: 7460) confident no hit no match PF00001::7tm_1 99.23::23-82 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2z73_A_1::5-82 very confident psy15241 117 P08255::Opsin Rh4 ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to cis-retinal.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.27::12-77 GO:0016028::rhabdomere confident hh_2z73_A_1::16-93 very confident psy15368 522 P30937::Somatostatin receptor type 4 ::Receptor for somatostatin-14. The activity of this receptor is mediated by G proteins which inhibits adenylyl cyclase. It is functionally coupled not only to inhibition of adenylate cyclase, but also to activation of both arachidonate release and mitogen-activated protein (MAP) kinase cascade.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00001::7tm_1 100.00::71-402 GO:0019222::regulation of metabolic process confident hh_3uon_A_1::50-111,160-257,264-373,379-424 very confident psy7523 179 Q8BZ39::Neuromedin-U receptor 2 ::Receptor for the neuromedin-U and neuromedin-S neuropeptides.::Mus musculus (taxid: 10090) portable no hit no match PF00001::7tm_1 99.86::59-178 GO:0019222::regulation of metabolic process confident hh_2ks9_A_1::38-106,108-152,155-179 very confident psy5300 177 P48974::Vasopressin V1b receptor ::Receptor for arginine vasopressin. The activity of this receptor is mediated by G proteins which activate a phosphatidyl-inositol-calcium second messenger system.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00001::7tm_1 99.84::51-176 GO:0023051::regulation of signaling confident hh_3uon_A_1::32-66,74-176 very confident psy2912 232 P58308::Orexin receptor type 2 ::Nonselective, high-affinity receptor for both orexin-A and orexin-B neuropeptides.::Mus musculus (taxid: 10090) confident no hit no match PF00001::7tm_1 99.77::95-227 GO:0023051::regulation of signaling confident hh_4dkl_A_1::75-130,132-184,188-211 very confident psy929 483 P20905::5-hydroxytryptamine receptor 1 ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins which activate adenylate cyclase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.96::87-360 GO:0023057::negative regulation of signaling confident hh_3uon_A_1::67-266 very confident psy10297 270 Q0EAB5::5-hydroxytryptamine receptor 1B ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that inhibit adenylate cyclase activity.::Equus caballus (taxid: 9796) portable no hit no match PF00001::7tm_1 99.50::102-211 GO:0023057::negative regulation of signaling confident hh_4ea3_A_1::103-140,144-230 very confident psy16087 252 P20288::D(2) dopamine receptor ::Dopamine receptor whose activity is mediated by G proteins which inhibit adenylyl cyclase.::Bos taurus (taxid: 9913) portable no hit no match PF00001::7tm_1 99.88::35-199 GO:0031090::organelle membrane confident hh_3uon_A_1::18-199 very confident psy461 507 P22909::Alpha-2A adrenergic receptor ::Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate cyclase through the action of G proteins.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00001::7tm_1 100.00::63-483 GO:0031090::organelle membrane confident hh_3uon_A_1::44-243 very confident psy6890 116 P28223::5-hydroxytryptamine receptor 2A ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 99.42::6-73 GO:0031090::organelle membrane confident hh_3uon_A_1::10-45,49-94 very confident psy17390 522 P28336::Neuromedin-B receptor ::Receptor for neuromedin-B.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 100.00::150-413 GO:0031090::organelle membrane confident hh_2ks9_A_1::133-242,244-276,282-338,340-367,369-419,424-434 very confident psy3302 123 P29275::Adenosine receptor A2b ::Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 99.78::22-120 GO:0031090::organelle membrane confident hh_3eml_A_1::4-120 very confident psy17917 342 Q29J90::G-protein coupled receptor moody ::Required in glia to regulate the acute sensitivity to cocaine and to continuously maintain the proper blood-brain barrier (BBB) function. A moody-mediated signaling pathway functions in glia to regulate nervous system insulation and drug-related behaviors.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF00001::7tm_1 100.00::36-293 GO:0031090::organelle membrane confident hh_4dkl_A_1::14-71,73-157,160-311 very confident psy15264 118 P47750::Thyrotropin receptor ::Receptor for thyrothropin. Plays a central role in controlling thyroid cell metabolism. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Also acts as a receptor for thyrostimulin (GPA2+GPB5).::Mus musculus (taxid: 10090) portable no hit no match PF00001::7tm_1 98.40::56-101 GO:0031326::regulation of cellular biosynthetic process confident hh_3odu_A_1::27-95 confident psy16124 323 Q9Y2T5::Probable G-protein coupled receptor 52 ::Orphan receptor.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 100.00::28-286 GO:0035075::response to ecdysone very confident hh_2rh1_A_1::18-152,154-257,265-288,290-301 very confident psy5474 138 O02813::Neuropeptide Y receptor type 1 ::Receptor for neuropeptide Y and peptide YY.::Canis familiaris (taxid: 9615) portable no hit no match PF00001::7tm_1 98.94::74-137 GO:0042221::response to chemical stimulus confident hh_4dkl_A_1::56-109,111-120,123-137 very confident psy14840 119 O43614::Orexin receptor type 2 ::Nonselective, high-affinity receptor for both orexin-A and orexin-B neuropeptides.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 98.32::75-116 GO:0042221::response to chemical stimulus confident hh_2rh1_A_1::55-117 very confident psy16676 461 P32304::5-hydroxytryptamine receptor 7 ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that stimulate adenylate cyclase.::Mus musculus (taxid: 10090) portable no hit no match PF00001::7tm_1 99.53::237-390 GO:0042221::response to chemical stimulus confident hh_4amj_A_1::233-278,319-364,367-391,393-408 very confident psy5093 662 Q24563::Dopamine receptor 2 ::Receptor for dopamine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Also capable of generating a calcium signal. In terms of antagonist responses, would be classed with the D1-like dopamine receptor group. This receptor is an attractive candidate for initiating biochemical cascades underlying olfactory learning.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.97::68-394 GO:0042221::response to chemical stimulus confident hh_3uon_A_1::48-113,115-364,370-415 very confident psy9472 647 Q6H2Y3::Bombesin receptor subtype-3 ::Role in sperm cell division, maturation, or function. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system.::Macaca mulatta (taxid: 9544) portable no hit no match PF00001::7tm_1 99.97::320-590 GO:0043005::neuron projection confident hh_2ks9_A_1::301-410,416-417,420-452,460-518,520-579,582-609 very confident psy13007 128 Q8BZ39::Neuromedin-U receptor 2 ::Receptor for the neuromedin-U and neuromedin-S neuropeptides.::Mus musculus (taxid: 10090) portable no hit no match PF00001::7tm_1 99.71::38-128 GO:0043229::intracellular organelle confident hh_3uon_A_1::1-85,87-128 very confident psy8502 168 Q9Y5X5::Neuropeptide FF receptor 2 ::Receptor for NPAF (A-18-F-amide) and NPFF (F-8-F-amide) neuropeptides, also known as morphine-modulating peptides. Can also be activated by a variety of naturally occurring or synthetic FMRF-amide like ligands. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 98.49::112-165 GO:0043229::intracellular organelle confident rp_4eiy_A_1::64-87,94-161 very confident psy13415 79 P30975::Tachykinin-like peptides receptor 99D ::Probable receptor for tachykinin-like peptides.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.74::1-78 GO:0043410::positive regulation of MAPK cascade confident hh_3uon_A_1::1-78 very confident psy17211 72 O97512::Neuromedin-K receptor ::This is a receptor for the tachykinin neuropeptide neuromedin-K (neurokinin B). It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger system.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF00001::7tm_1 99.55::1-72 GO:0043679::axon terminus confident hh_2ks9_A_1::1-72 very confident psy14146 133 P30975::Tachykinin-like peptides receptor 99D ::Probable receptor for tachykinin-like peptides.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.66::48-133 GO:0043679::axon terminus confident hh_2ks9_A_1::23-133 very confident psy17199 182 Q75Z89::5-hydroxytryptamine receptor 2A ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.::Bos taurus (taxid: 9913) confident no hit no match PF00001::7tm_1 99.55::12-119 GO:0043679::axon terminus confident hh_3uon_A_1::12-117 very confident psy9227 156 Q61212::Neuropeptide Y receptor type 6 ::Receptor for neuropeptide Y and peptide YY. The rank order of affinity of this receptor for pancreatic polypeptides is NPY = PYY >= NPY (2-36) = [Leu-31, Pro-34] NPY > NPY (13-36) > PP. The activity of this receptor is mediated by G proteins that inhibits adenylate cyclase activity.::Mus musculus (taxid: 10090) portable no hit no match PF00001::7tm_1 99.73::10-125 GO:0044057::regulation of system process confident hh_2ks9_A_1::9-53,57-145 very confident psy15243 150 O61303::Opsin, ultraviolet-sensitive ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to 11-cis-retinal.::Apis mellifera (taxid: 7460) confident no hit no match PF00001::7tm_1 99.73::5-149 GO:0044425::membrane part confident hh_2z73_A_1::4-31,33-104,107-148 very confident psy3988 283 P30874::Somatostatin receptor type 2 ::Receptor for somatostatins-14 and -28. This receptor is coupled via pertussis toxin sensitive G proteins to inhibition of adenylyl cyclase. In addition it stimulates phosphotyrosine phosphatase and PLC via pertussis toxin insensitive as well as sensitive G proteins. In RIN-5F cells, this receptor inhibits calcium entry by suppressing voltage dependent calcium-channels.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 99.91::57-265 GO:0044425::membrane part confident hh_3sn6_R_1::38-101,107-114,116-182 very confident psy7555 322 P90680::Opsin, blue-sensitive ::Visual pigments are the light-absorbing molecules that mediate vision. They consist of an apoprotein, opsin, covalently linked to 11-cis-retinal.::Apis mellifera (taxid: 7460) portable no hit no match PF00001::7tm_1 99.98::2-251 GO:0044425::membrane part confident hh_2z73_A_1::1-27,43-117,119-267 very confident psy10964 103 Q8BZ39::Neuromedin-U receptor 2 ::Receptor for the neuromedin-U and neuromedin-S neuropeptides.::Mus musculus (taxid: 10090) confident no hit no match PF00001::7tm_1 98.12::66-101 GO:0044425::membrane part confident hh_3uon_A_1::49-101 very confident psy17334 188 Q9TTQ9::Probable G-protein coupled receptor 83 ::Orphan receptor. Could be a neuropeptide Y receptor.::Canis familiaris (taxid: 9615) portable no hit no match PF00001::7tm_1 98.17::74-136 GO:0044425::membrane part confident no hit no match psy11830 387 P47799::Follicle-stimulating hormone receptor ::Receptor for follicle-stimulating hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Among all mammalian FSH receptors, on the horse receptor does not bind LH/chorionic gonadotrophin (CG).::Equus caballus (taxid: 9796) portable no hit no match PF00001::7tm_1 99.90::148-332 GO:0044464::cell part confident hh_2z73_A_1::117-132,147-193,202-331 very confident psy1136 167 Q9DDN6::Neuropeptide Y receptor type 2 ::Receptor for neuropeptide Y and peptide YY.::Gallus gallus (taxid: 9031) portable no hit no match PF00001::7tm_1 99.36::49-148 GO:0044464::cell part confident hh_3uon_A_1::30-162 very confident psy15288 187 Q9TTQ9::Probable G-protein coupled receptor 83 ::Orphan receptor. Could be a neuropeptide Y receptor.::Canis familiaris (taxid: 9615) portable no hit no match PF00001::7tm_1 99.30::7-175 GO:0044464::cell part confident hh_2ks9_A_1::6-77,130-157,159-174 very confident psy12217 262 P16235::Lutropin-choriogonadotropic hormone receptor ::Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00001::7tm_1 99.93::76-260 GO:0046886::positive regulation of hormone biosynthetic process confident hh_4amj_A_1::59-121,130-260 very confident psy11836 112 P16235::Lutropin-choriogonadotropic hormone receptor ::Receptor for lutropin-choriogonadotropic hormone. The activity of this receptor is mediated by G proteins which activate adenylate cyclase.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00001::7tm_1 98.97::2-53 GO:0046886::positive regulation of hormone biosynthetic process confident hh_4ea3_A_1::2-70 very confident psy3090 326 O46639::Thyrotropin-releasing hormone receptor ::Receptor for thyrotropin-releasing hormone. This receptor is mediated by G proteins which activate a phosphatidylinositol-calcium second messenger system.::Bos taurus (taxid: 9913) confident no hit no match PF00001::7tm_1 99.96::93-322 GO:0048523::negative regulation of cellular process confident hh_3uon_A_1::74-139,142-236,239-274 very confident psy7568 154 P16610::Substance-K receptor ::This is a receptor for the tachykinin neuropeptide substance K (neurokinin A). It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger system. The rank order of affinity of this receptor to tachykinins is: substance K > neuromedin-K > substance P.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00001::7tm_1 99.18::2-65 GO:0048523::negative regulation of cellular process confident hh_2ks9_A_1::3-84 very confident psy5550 127 P30553::Gastrin/cholecystokinin type B receptor ::Receptor for gastrin and cholecystokinin. The CKK-B receptors occur throughout the central nervous system where they modulate anxiety, analgesia, arousal, and neuroleptic activity. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00001::7tm_1 99.02::60-125 GO:0048523::negative regulation of cellular process confident hh_3odu_A_1::38-105,107-125 very confident psy11022 492 P30975::Tachykinin-like peptides receptor 99D ::Probable receptor for tachykinin-like peptides.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00001::7tm_1 99.97::57-299 GO:0050794::regulation of cellular process confident hh_3pbl_A_1::38-105,108-192,196-315 very confident psy6126 214 P48039::Melatonin receptor type 1A ::High affinity receptor for melatonin. Likely to mediates the reproductive and circadian actions of melatonin. The activity of this receptor is mediated by pertussis toxin sensitive G proteins that inhibit adenylate cyclase activity.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 99.95::2-177 GO:0050794::regulation of cellular process confident hh_3uon_A_1::2-136,138-180 very confident psy4354 342 Q0EAB6::5-hydroxytryptamine receptor 1A ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. The activity of this receptor is mediated by G proteins that inhibit adenylate cyclase activity.::Equus caballus (taxid: 9796) confident no hit no match PF00001::7tm_1 99.94::4-317 GO:0050896::response to stimulus confident hh_3uon_A_1::4-127 very confident psy5549 331 P30937::Somatostatin receptor type 4 ::Receptor for somatostatin-14. The activity of this receptor is mediated by G proteins which inhibits adenylyl cyclase. It is functionally coupled not only to inhibition of adenylate cyclase, but also to activation of both arachidonate release and mitogen-activated protein (MAP) kinase cascade.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00001::7tm_1 100.00::60-320 GO:0051930::regulation of sensory perception of pain confident hh_3uon_A_1::40-145,147-198,205-290,292-292,300-331 very confident psy9274 318 O08726::Galanin receptor type 2 ::Receptor for the hormone galanin and for GALP. The activity of this receptor is mediated by G proteins that activate the phospholipase C/protein kinase C pathway (via G(q)) and that inhibit adenylyl cyclase (via G(i)).::Rattus norvegicus (taxid: 10116) portable no hit no match PF00001::7tm_1 99.85::79-221 GO:0055080::cation homeostasis confident no hit no match psy5192 324 O02813::Neuropeptide Y receptor type 1 ::Receptor for neuropeptide Y and peptide YY.::Canis familiaris (taxid: 9615) confident no hit no match PF00001::7tm_1 100.00::49-313 GO:0070474::positive regulation of uterine smooth muscle contraction confident hh_3uon_A_1::30-179,187-196,200-287,292-324 very confident psy14313 317 P30989::Neurotensin receptor type 1 ::Receptor for the tridecapeptide neurotensin. It is associated with G proteins that activate a phosphatidylinositol-calcium second messenger system.::Homo sapiens (taxid: 9606) portable no hit no match PF00001::7tm_1 99.49::21-150 GO:0070887::cellular response to chemical stimulus confident hh_4ea3_A_1::19-68,79-122,125-172 very confident psy16378 578 Q9N2A4::Muscarinic acetylcholine receptor M3 ::The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins. Primary transducing effect is Pi turnover.::Pan troglodytes (taxid: 9598) confident no hit no match PF00001::7tm_1 99.97::146-326 GO:0071883::activation of MAPK activity by adrenergic receptor signaling pathway confident bp_3uon_A_1::141-287,289-331 very confident psy7567 245 P25931::Neuropeptide Y receptor ::Receptor for neuropeptide Y and peptide YY.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00001::7tm_1 99.82::55-237 GO:0071944::cell periphery confident hh_2ks9_A_1::42-75,80-157,165-221,223-237 very confident psy5301 132 no hit no match no hit no match PF00001::7tm_1 97.31::54-131 GO:0097211::cellular response to gonadotropin-releasing hormone confident hh_3uon_A_1::54-86,89-94,98-131 portable psy4648 116 Q2Q426::EGF-like module-containing mucin-like hormone receptor-like 2 ::Cell surface receptor that binds to the chondroitin sulfate moiety of glycosaminoglycan chains and promotes cell attachment. Promotes granulocyte chemotaxis, degranulation and adhesion. In macrophages, promotes the release of inflammatory cytokines, including IL8 and TNF.::Macaca mulatta (taxid: 9544) portable no hit no match PF00002::7tm_2 98.64::12-57 GO:0005737::cytoplasm confident hh_3uon_A_1::10-80 portable psy15663 179 Q86SQ6::Probable G-protein coupled receptor 123 ::Orphan receptor.::Homo sapiens (taxid: 9606) portable no hit no match PF00002::7tm_2 99.72::82-177 GO:0005886::plasma membrane confident hh_4dlo_A_1::31-46,48-77 portable psy8057 243 P35347::Corticotropin-releasing factor receptor 1 ::Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Mus musculus (taxid: 10090) portable no hit no match PF00002::7tm_2 99.85::54-192 GO:0019438::aromatic compound biosynthetic process confident hh_3uon_A_1::144-212 portable psy15494 149 Q68EK2::Calcitonin gene-related peptide type 1 receptor ::Receptor for calcitonin-gene-related peptide (CGRP) (By similarity). Receptor specificity may be modulated by accessory proteins. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Danio rerio (taxid: 7955) portable no hit no match PF00002::7tm_2 99.76::2-102 GO:0043234::protein complex confident hh_3eml_A_1::52-128 confident psy15397 289 Q9W4Y2::PDF receptor ::Receptor for PDF, a neuropeptide controlling circadian behavioral rhythms. Probably regulates circadian behavioral rhythms through coordination of activities of clock neurons. PDF-binding results in the elevation of cAMP synthesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00002::7tm_2 99.95::42-202 GO:0043234::protein complex confident hh_4amj_A_1::111-135,137-183,185-207,209-225 portable psy14518 226 Q80TR1::Latrophilin-1 ::Calcium-independent receptor of high affinity for alpha-latrotoxin, an excitatory neurotoxin present in black widow spider venom which triggers massive exocytosis from neurons and neuroendocrine cells. Receptor propably implicated in the regulation of exocytosis.::Mus musculus (taxid: 10090) portable no hit no match PF00002::7tm_2 99.87::1-172 GO:0044424::intracellular part confident hh_4dlq_A_1::61-95,97-133 confident psy8055 139 P35347::Corticotropin-releasing factor receptor 1 ::Receptor for corticotropin releasing factor (CRH). Shows high-affinity CRF binding. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Mus musculus (taxid: 10090) portable no hit no match PF00002::7tm_2 99.76::47-139 GO:0048523::negative regulation of cellular process confident hh_1u34_A_1::5-40 confident psy15503 157 Q8WN93::Calcitonin gene-related peptide type 1 receptor ::Receptor for calcitonin-gene-related peptide (CGRP) together with RAMP1 and receptor for adrenomedullin together with RAMP2 or RAMP3. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Sus scrofa (taxid: 9823) portable no hit no match PF00002::7tm_2 100.00::1-157 GO:0048523::negative regulation of cellular process confident hh_4amj_A_1::4-88,93-131 portable psy3586 59 O88871::Gamma-aminobutyric acid type B receptor subunit 2 ::Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00003::7tm_3 99.10::2-59 GO:0031631::negative regulation of synaptic vesicle fusion to presynaptic membrane confident no hit no match psy3590 258 O88871::Gamma-aminobutyric acid type B receptor subunit 2 ::Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00003::7tm_3 99.52::1-79 GO:0031631::negative regulation of synaptic vesicle fusion to presynaptic membrane confident hh_1hjb_A_1::107-152 portable psy6048 285 Q09630::Probable metabotropic glutamate receptor mgl-1 ::Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate cyclase activity.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00003::7tm_3 100.00::28-285 GO:0043229::intracellular organelle confident no hit no match psy16109 129 P46461::Vesicle-fusing ATPase 1 ::Required for vesicle-mediated transport. Catalyzes the fusion of transport vesicles within the Golgi cisternae. Is also required for transport from the endoplasmic reticulum to the Golgi stack. Seem to function as a fusion protein required for the delivery of cargo proteins to all compartments of the Golgi stack independent of vesicle origin.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00004::AAA 95.01::2-48 GO:0048172::regulation of short-term neuronal synaptic plasticity confident hh_1d2n_A_1::2-78,81-121 very confident psy1560 175 Q812B2::Glycoprotein hormone beta-5 ::Stimulates the thyroid. Binds and activates THSR, leading to increased cAMP production.::Mus musculus (taxid: 10090) portable no hit no match PF00007::Cys_knot 99.95::61-169 GO:0046982::protein heterodimerization activity confident hh_4ay9_B_1::61-80,84-99,101-136,140-167 very confident psy1559 138 Q86YW7::Glycoprotein hormone beta-5 ::Stimulates the thyroid. Binds and activates THSR, leading to increased cAMP production.::Homo sapiens (taxid: 9606) portable no hit no match PF00007::Cys_knot 99.95::24-130 GO:0046982::protein heterodimerization activity confident hh_4ay9_B_1::24-43,47-62,64-99,103-129 very confident psy11801 73 P35555::Fibrillin-1 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) confident no hit no match PF00008::EGF 97.92::2-25 GO:0005509::calcium ion binding confident hh_2wg3_C_1::3-6,8-62 very confident psy6207 823 A0JM12::Multiple epidermal growth factor-like domains protein 10 ::Membrane receptor involved in phagocytosis. May also regulate homotypic retinal neuron repulsion. May play role in cell adhesion and motility. May also be an essential factor in the regulation of myogenesis, controlling the balance between skeletal muscle satellite cells proliferation and differentiation.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00008::EGF 96.71::799-823 GO:0005605::basal lamina confident hh_2gy5_A_1::554-587,590-618,632-677,693-699,710-713,716-719,727-767,769-784 very confident psy12789 514 G5EGQ6::Teneurin-1 ::Plays a role in the gonadal basement membrane maintenance and/or adhesion early in development. Contributes to the guidance of pharyngeal neurons.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00008::EGF 97.30::388-415 GO:0005886::plasma membrane confident hh_3k6s_B_1::241-273,275-282,284-399,404-419 very confident psy3616 143 Q9JI18::Low-density lipoprotein receptor-related protein 1B ::Potential cell surface proteins that bind and internalize ligands in the process of receptor-mediated endocytosis.::Mus musculus (taxid: 10090) portable no hit no match PF00008::EGF 98.43::3-32 GO:0016324::apical plasma membrane confident hh_1nql_B_1::3-37 confident psy5613 1010 Q9R172::Neurogenic locus notch homolog protein 3 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00008::EGF 97.74::91-121 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_1uzk_A_1::88-97,99-128,136-167,174-177,187-189,208-228,239-253,255-276 very confident psy18122 188 O73791::Tyrosine-protein kinase receptor Tie-2 ::Tyrosine-protein kinase that acts as cell-surface receptor for angiopoietins and regulates angiogenesis, endothelial cell survival, proliferation, migration, adhesion and cell spreading, reorganization of the actin cytoskeleton, but also maintenance of vascular quiescence. Can activate or inhibit angiogenesis, depending on the context. Angiopoietin signaling triggers receptor dimerization and autophosphorylation at specific tyrosine residues that then serve as binding sites for scaffold proteins and effectors.::Danio rerio (taxid: 7955) portable no hit no match PF00008::EGF 97.82::8-33 GO:0043234::protein complex confident hh_2gy5_A_1::11-53,55-99,101-110,112-113,116-120,122-130 very confident psy17084 721 O35516::Neurogenic locus notch homolog protein 2 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). May play an essential role in postimplantation development, probably in some aspect of cell specification and/or differentiation. In collaboration with RELA/p65 enhances NFATc1 promoter activity and positively regulates RANKL-induced osteoclast differentiation.::Mus musculus (taxid: 10090) portable no hit no match PF00008::EGF 97.85::54-82 GO:0048523::negative regulation of cellular process confident hh_4d90_A_2::547-566,568-571,576-576,597-600,602-677 very confident psy11297 132 A2ASQ1::Agrin ::Plays a central role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Ligand of the MUSK signaling complex that directly binds LRP4 in this complex and induces the phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane.::Mus musculus (taxid: 10090) portable no hit no match PF00008::EGF 98.85::34-65 GO:0048699::generation of neurons confident hh_4d90_A_1::17-49,51-74,76-88 very confident psy4097 129 O70244::Cubilin ::Cotransporter which plays a role in lipoprotein, vitamin and iron metabolism, by facilitating their uptake. Binds to ALB, MB, Kappa and lambda-light chains, TF, hemoglobin, GC, SCGB1A1, APOA1, high density lipoprotein, and the GIF-cobalamin complex. The binding of all ligands requires calcium. Serves as important transporter in several absorptive epithelia, including intestine, renal proximal tubules and embryonic yolk sac. Interaction with LRP2 mediates its trafficking throughout vesicles and facilitates the uptake of specific ligands like GC, hemoglobin, ALB, TF and SCGB1A1. Interaction with AMN controls its trafficking to the plasma membrane and facilitates endocytosis of ligands. May play an important role in the development of the peri-implantation embryo through internalization of APOA1 and cholesterol. Binds to LGALS3 at the maternal-fetal interface.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00008::EGF 98.42::88-119 GO:0048699::generation of neurons confident hh_1yo8_A_2::35-40,43-57,61-74,78-80,82-83,86-99,101-121 very confident psy11060 155 P10040::Protein crumbs ::Plays a central role in cell polarity establishment. Participates in the assembly, positioning and maintenance of adherens junctions via its interaction with the SAC complex. Controls the coalescence of the spots of zonula adherens (ZA) into a adhesive ring around the cells. It may act as a signal. Involved in morphogenesis of the photoreceptor rhabdomere, for positioning and growth of rhabdomere and AJ during the crucial period of photoreceptor extension along the proximodistal axis of the retina.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00008::EGF 97.81::87-123 GO:0048699::generation of neurons confident hh_2vj3_A_1::19-90,92-100,106-131 very confident psy6902 86 Q0V8T5::Contactin-associated protein like 5-2 ::May play a role in the correct development and proper functioning of the peripheral and central nervous system and be involved in cell adhesion and intercellular communication.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00008::EGF 98.90::50-84 GO:0048699::generation of neurons confident hh_4d90_A_2::2-25,30-30,34-76,78-86 confident psy2457 189 Q9ESC1::EGF, latrophilin and seven transmembrane domain-containing protein 1 ::Could be involved in cardiac development.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00008::EGF 97.99::141-167 GO:0048699::generation of neurons confident hh_2vj3_A_1::25-59,63-65,68-86,92-110,118-126,141-169,172-177 very confident psy2064 221 Q9V5N8::Protocadherin-like wing polarity protein stan ::Involved in the fz signaling pathway that controls wing tissue polarity. Also mediates homophilic cell adhesion. May play a role in initiating prehair morphogenesis. May play a critical role in tissue polarity and in formation of normal dendrite fields.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00008::EGF 98.71::159-211 GO:0050896::response to stimulus confident hh_2gy5_A_1::157-173,198-217 portable psy7015 284 Q07008::Neurogenic locus notch homolog protein 1 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. May be important for follicular differentiation and possibly cell fate selection within the follicle. During cerebellar development, may function as a receptor for neuronal DNER and may be involved in the differentiation of Bergmann glia. Represses neuronal and myogenic differentiation. May enhance HIF1A function by sequestering HIF1AN away from HIF1A (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00008::EGF 98.07::242-270 GO:0070887::cellular response to chemical stimulus confident hh_2vj3_A_2::63-125,145-190,194-206 very confident psy8281 178 Q8JZM4::Delta and Notch-like epidermal growth factor-related receptor ::Mediates neuron-glia interaction during astrocytogenesis. May promote differentiation of Bergmann glia during cerebellar development by activating DELTEX-dependent NOTCH1 signaling.::Mus musculus (taxid: 10090) portable no hit no match PF00008::EGF 98.37::136-166 GO:0070887::cellular response to chemical stimulus confident hh_4d90_A_2::18-35,37-131 very confident psy2848 86 Q90691::Heart- and neural crest derivatives-expressed protein 1 ::Plays an essential role in cardiac morphogenesis.::Gallus gallus (taxid: 9031) portable no hit no match PF00010::HLH 99.30::9-60 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident hh_2ql2_B_1::9-62 very confident psy11625 314 Q3ZBG4::Transcription factor HES-1 ::Transcriptional repressor of genes that require a bHLH protein for their transcription. May act as a negative regulator of myogenesis by inhibiting the functions of MYOD1 and ASH1. Binds DNA on N-box motifs: 5'-CACNAG-3' with high affinity and on E-box motifs: 5'-CANNTG-3' with low affinity (By similarity). May play a role in a functional FA core complex response to DNA cross-link damage, being required for the stability and nuclear localization of FA core complex proteins, as well as for FANCD2 monoubiquitination in response to DNA damage.::Bos taurus (taxid: 9913) portable no hit no match PF00010::HLH 99.38::213-270 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_1a0a_A_1::213-247,249-272 confident psy8078 105 Q02576::Helix-loop-helix protein 1 ::May serve as DNA-binding protein and may be involved in the control of cell-type determination, possibly within the developing nervous system.::Mus musculus (taxid: 10090) confident no hit no match PF00010::HLH 99.65::48-100 GO:0001085::RNA polymerase II transcription factor binding confident hh_2ql2_B_1::48-105 very confident psy11481 561 O08789::Max-binding protein MNT ::Binds DNA as a heterodimer with MAX and represses transcription. Binds to the canonical E box sequence 5'-CACGTG-3' and, with higher affinity, to 5'-CACGCG-3'.::Mus musculus (taxid: 10090) portable no hit no match PF00010::HLH 99.45::185-237 GO:0003677::DNA binding confident no hit no match psy4528 87 P56721::Transcription factor collier ::May act as a 'second-level regulator' of head patterning. Required for establishment of the PS(-1)/PS0 parasegmental border and formation of the intercalary segment. Required for expression of the segment polarity genes hedgehog, engrailed and wingless, and the segment-identity genes CAP and collar in the intercalary segment. Required at the onset of the gastrulation for the correct formation of the mandibular segment.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00010::HLH 96.64::8-45 GO:0003677::DNA binding very confident hh_3muj_A_1::1-50 very confident psy8266 68 P35869::Aryl hydrocarbon receptor ::Ligand-activated transcriptional activator. Binds to the XRE promoter region of genes it activates. Activates the expression of multiple phase I and II xenobiotic chemical metabolizing enzyme genes (such as the CYP1A1 gene). Mediates biochemical and toxic effects of halogenated aromatic hydrocarbons. Involved in cell-cycle regulation. Likely to play an important role in the development and maturation of many tissues.::Homo sapiens (taxid: 9606) confident no hit no match PF00010::HLH 99.34::14-61 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity very confident hh_4f3l_B_1::14-63 very confident psy10347 67 Q9BE97::Aryl hydrocarbon receptor nuclear translocator ::Required for activity of the Ah (dioxin) receptor. This protein is required for the ligand-binding subunit to translocate from the cytosol to the nucleus after ligand binding. The complex then initiates transcription of genes involved in the activation of PAH procarcinogens (By similarity). The heterodimer with HIF1A or EPAS1/HIF2A functions as a transcriptional regulator of the adaptive response to hypoxia.::Bos taurus (taxid: 9913) very confident no hit no match PF00010::HLH 98.99::1-39 GO:0003714::transcription corepressor activity very confident hh_4f3l_B_1::1-42 very confident psy15840 161 Q5IS79::Protein atonal homolog 1 ::Transcriptional regulator. Activates E box-dependent transcription in collaboration with TCF3/E47, but the activity is completely antagonized by the negative regulator of neurogenesis HES1. Plays a role in the differentiation of subsets of neural cells by activating E box-dependent transcription.::Pan troglodytes (taxid: 9598) confident no hit no match PF00010::HLH 99.55::98-150 GO:0005634::nucleus confident hh_2ql2_B_1::98-156 very confident psy17810 62 Q24119::Protein trachealess ::Transcription factor, master regulator of tracheal cell fates in the embryo, necessary for the development of the salivary gland duct and the posterior spiracles. It may induce a general fate of branched tubular structures of epithelial origin. Heterodimers of tgo/trh are involved in the control of breathless expression.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00010::HLH 95.25::1-26 GO:0005737::cytoplasm very confident hh_4f3l_A_1::1-3,7-34 confident psy14654 122 Q01069::Enhancer of split mbeta protein ::Transcriptional repressor of genes that require a bHLH protein for their transcription. May serve as a transcriptional regulator of the Achaete-scute complex (AS-C) genes. Contributes to the neural-epidermal lineage decision during early neurogenesis. Part of the Notch signaling pathway.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00010::HLH 99.53::11-68 GO:0009605::response to external stimulus confident hh_1an4_A_1::8-44,47-71 very confident psy2365 285 Q90691::Heart- and neural crest derivatives-expressed protein 1 ::Plays an essential role in cardiac morphogenesis.::Gallus gallus (taxid: 9031) confident no hit no match PF00010::HLH 99.47::174-226 GO:0019438::aromatic compound biosynthetic process confident hh_2ql2_B_1::174-231 very confident psy3641 202 Q9Y5J3::Hairy/enhancer-of-split related with YRPW motif protein 1 ::Downstream effector of Notch signaling which may be required for cardiovascular development. Transcriptional repressor which binds preferentially to the canonical E box sequence 5'-CACGTG-3'. Represses transcription by the cardiac transcriptional activators GATA4 and GATA6.::Homo sapiens (taxid: 9606) portable no hit no match PF00010::HLH 99.49::51-105 GO:0031323::regulation of cellular metabolic process confident hh_4f3l_B_1::48-81,84-108 very confident psy5774 201 P24899::T-cell acute lymphocytic leukemia protein 1 homolog ::Implicated in the genesis of hemopoietic malignancies. It may play an important role in hemopoietic differentiation.::Gallus gallus (taxid: 9031) confident no hit no match PF00010::HLH 99.49::18-70 GO:0035264::multicellular organism growth confident hh_1an4_A_1::16-71 confident psy1721 74 O88940::Musculin ::Transcription repressor that blocks myogenesis and activation of E-box dependent muscle genes.::Mus musculus (taxid: 10090) confident no hit no match PF00010::HLH 99.16::2-41 GO:0045944::positive regulation of transcription from RNA polymerase II promoter confident hh_3u5v_A_1::2-55 very confident psy5916 190 Q71T09::Class E basic helix-loop-helix protein 22 ::May acts as a transcriptional repressor.::Gallus gallus (taxid: 9031) confident no hit no match PF00010::HLH 99.47::85-139 GO:0045944::positive regulation of transcription from RNA polymerase II promoter confident hh_2ql2_B_1::85-114,117-144 very confident psy9185 248 Q0VG99::Mesoderm posterior protein 2 ::Transcription factor with important role in somitogenesis. Defines the rostrocaudal patterning of the somite by participating in distinct Notch pathways. Regulates also the FGF signaling pathway. Specifies the rostral half of the somites. Generates rostro-caudal polarity of somites by down-regulating in the presumptive rostral domain DLL1, a Notch ligand. Participates in the segment border formation by activating in the anterior presomitic mesoderm LFNG, a negative regulator of DLL1-Notch signaling. Acts as a strong suppressor of Notch activity. Together with MESP1 is involved in the epithelialization of somitic mesoderm and in the development of cardiac mesoderm.::Homo sapiens (taxid: 9606) portable no hit no match PF00010::HLH 99.45::143-196 GO:0048856::anatomical structure development confident hh_1mdy_A_1::131-136,139-171,174-201 very confident psy11118 137 B6VQA1::Protein dimmed ::Transcription factor that regulates neurosecretory (NS) cell function and neuroendocrine cell fate. Acts as a master regulator of common NS functions such as Phm expression and neuropeptide production. Plays a role as a regulator of peptide-containing large dense-core vesicle (LDCV) production and peptidergic cell differentiation. Controls transcription of FMRFamide in Tv neuronal cells and Fur1 in Ap-let cells (Tvb and dorsal apterous cells). Also required for up-regulation of Phm in Tv and Ap-let cells, and expression of three neuropeptide genes, Dms, FMRFamide and Lk. Influences both regulated and constitutive secretory activity in neuroendocrine cells at embryonic and postembryonic level. Loss of function studies show reduced cellular levels of various neuropeptides and neuropeptide biosynthetic enzymes.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00010::HLH 99.63::38-90 GO:0070888::E-box binding confident hh_2ql2_B_1::38-95 very confident psy3606 96 O61735::Circadian locomoter output cycles protein kaput ::Circadian regulator that acts as a transcription factor and generates a rhythmic output with a period of about 24 hours. Oscillates in antiphase to the cycling observed for period (PER) and timeless (TIM). According to PubMed:9742131, reaches peak abundance within several hours of the dark-light transition at ZT0 (zeitgeber 0), whereas PubMed:9616122 describes bimodal oscillating expression with maximum at ZT5 and ZT23. Clock-cycle heterodimers activate cycling transcription of PER and TIM by binding to the E-box (3'-CACGTG-5') present in their promoters. Once induced, Period and Timeless block Clock's ability to transactivate their promoters.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00010::HLH 99.68::28-78 GO:0070888::E-box binding confident hh_4f3l_A_1::19-82 very confident psy3607 95 O61735::Circadian locomoter output cycles protein kaput ::Circadian regulator that acts as a transcription factor and generates a rhythmic output with a period of about 24 hours. Oscillates in antiphase to the cycling observed for period (PER) and timeless (TIM). According to PubMed:9742131, reaches peak abundance within several hours of the dark-light transition at ZT0 (zeitgeber 0), whereas PubMed:9616122 describes bimodal oscillating expression with maximum at ZT5 and ZT23. Clock-cycle heterodimers activate cycling transcription of PER and TIM by binding to the E-box (3'-CACGTG-5') present in their promoters. Once induced, Period and Timeless block Clock's ability to transactivate their promoters.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00010::HLH 99.70::28-78 GO:0070888::E-box binding confident no hit no match psy4627 270 P26687::Twist-related protein 1 ::Acts as a transcriptional regulator. Inhibits myogenesis by sequestrating E proteins, inhibiting trans-activation by MEF2, and inhibiting DNA-binding by MYOD1 through physical interaction. This interaction probably involves the basic domains of both proteins. Also represses expression of proinflammatory cytokines such as TNFA and IL1B. Regulates cranial suture patterning and fusion. Activates transcription as a heterodimer with E proteins. Regulates gene expression differentially, depending on dimer composition. Homodimers induce expression of FGFR2 and POSTN while heterodimers repress FGFR2 and POSTN expression and induce THBS1 expression. Heterodimerization is also required for osteoblast differentiation.::Mus musculus (taxid: 10090) confident no hit no match PF00010::HLH 99.43::158-209 GO:0070888::E-box binding confident hh_2ql2_B_1::158-214 very confident psy6235 76 P34474::Helix-loop-helix protein 11 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00010::HLH 98.49::37-74 GO:0070888::E-box binding confident hh_2ql2_B_1::37-75 very confident psy9718 70 Q26263::Protein deadpan ::Transcriptional repressor of genes that require a bHLH protein for their transcription. Likely to be involved in the functional rather than the morphological differentiation of neurons. Loss of DPN function results in weak motor activity, lethargic behavior, and death. Implicated in sex determination as Groucho-DPN complex act directly to repress SXL transcription.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00010::HLH 99.53::1-51 GO:0070888::E-box binding confident hh_1a0a_A_1::1-28,30-54 very confident psy15318 566 Q90683::Transcription factor 4 (Fragment) ::Transcription factor that binds to the immunoglobulin enchancer Mu-E5/KE5-motif. Involved in the initiation of neuronal differentiation. Binds to the E-box present in the somatostatin receptor 2 initiator element (SSTR2-INR) to activate transcription.::Gallus gallus (taxid: 9031) portable no hit no match PF00010::HLH 99.26::446-499 GO:0070888::E-box binding confident hh_3u5v_A_1::444-510 very confident psy5860 138 Q90690::Heart- and neural crest derivatives-expressed protein 2 ::Essential for cardiac morphogenesis. Binds DNA on E-box consensus sequence 5'-CANNTG-3' (By similarity). Plays an important role in limb development, particularly in the establishment of anterior-posterior polarization of the limb bud.::Gallus gallus (taxid: 9031) confident no hit no match PF00010::HLH 99.64::25-77 GO:0070888::E-box binding confident hh_2ql2_B_1::25-82 very confident psy8988 133 Q923Z4::Fer3-like protein ::Transcription factor that binds to the E-box and functions as inhibitor of transcription. DNA binding requires dimerization with an E protein. Inhibits transcription activation by ASCL1/MASH1 by sequestering E proteins.::Mus musculus (taxid: 10090) confident no hit no match PF00010::HLH 99.61::43-95 GO:0070888::E-box binding confident hh_2ql2_B_1::43-100 very confident psy10170 366 O76840::Papilin ::Isoform b has a role in post embryonic distal cell tip migration. Essential extracellular matrix (ECM) protein required for hypodermal enclosure in the embryo. Isoform a has a role in embryogenesis, the second phase of distal cell tip migration and is required for distribution of the metalloproteinase, mig-17, during organogenesis.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00014::Kunitz_BPTI 99.45::304-356 GO:0004867::serine-type endopeptidase inhibitor activity confident hh_2ody_E_1::245-357 very confident psy10710 161 P00978::Protein AMBP ::May diffuse into follicular fluid after an ovulatory stimulus to act as a structural linker that ensures normal cumulus expansion, through stabilization of the cumulus extracellular matrix, thus supporting the process of ovulation.::Bos taurus (taxid: 9913) portable no hit no match PF00014::Kunitz_BPTI 99.59::103-155 GO:0004867::serine-type endopeptidase inhibitor activity confident hh_2ody_E_1::50-156 very confident psy13436 67 Q8T3S7::Protease inhibitor U1-aranetoxin-Av1a ::Putative insecticidal toxin that may inhibit trypsin.::Araneus ventricosus (taxid: 182803) portable no hit no match PF00014::Kunitz_BPTI 99.86::13-65 GO:0004867::serine-type endopeptidase inhibitor activity confident hh_1jc6_A_1::9-66 very confident psy13435 75 Q8T3S7::Protease inhibitor U1-aranetoxin-Av1a ::Putative insecticidal toxin that may inhibit trypsin.::Araneus ventricosus (taxid: 182803) portable no hit no match PF00014::Kunitz_BPTI 99.82::13-65 GO:0004867::serine-type endopeptidase inhibitor activity confident hh_1jc6_A_1::10-68 very confident psy10173 456 O76840::Papilin ::Isoform b has a role in post embryonic distal cell tip migration. Essential extracellular matrix (ECM) protein required for hypodermal enclosure in the embryo. Isoform a has a role in embryogenesis, the second phase of distal cell tip migration and is required for distribution of the metalloproteinase, mig-17, during organogenesis.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00014::Kunitz_BPTI 99.42::343-396 GO:0005576::extracellular region confident hh_2ody_E_1::340-363,365-426,433-450 very confident psy10163 615 O76840::Papilin ::Isoform b has a role in post embryonic distal cell tip migration. Essential extracellular matrix (ECM) protein required for hypodermal enclosure in the embryo. Isoform a has a role in embryogenesis, the second phase of distal cell tip migration and is required for distribution of the metalloproteinase, mig-17, during organogenesis.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00014::Kunitz_BPTI 99.41::47-99 GO:0005576::extracellular region confident hh_1bik_A_2::43-100,175-217 very confident psy10162 141 Q7YRQ8::Tissue factor pathway inhibitor 2 ::May play a role in the regulation of plasmin-mediated matrix remodeling. Inhibits trypsin, plasmin, factor VIIa/tissue factor and weakly factor Xa. Has no effect on thrombin.::Bos taurus (taxid: 9913) portable no hit no match PF00014::Kunitz_BPTI 99.69::23-75 GO:0005576::extracellular region confident hh_2ody_E_1::20-105,109-132 very confident psy5171 180 P78559::Microtubule-associated protein 1A ::Structural protein involved in the filamentous cross-bridging between microtubules and other skeletal elements.::Homo sapiens (taxid: 9606) portable no hit no match PF00015::MCPsignal 93.51::58-163 GO:0000142::cellular bud neck contractile ring confident hh_2ch7_A_1::119-157 confident psy8455 101 P29353::SHC-transforming protein 1 ::Signaling adapter that couples activated growth factor receptors to signaling pathways. Participates in a signaling cascade initiated by activated KIT and KITLG/SCF. Isoform p46Shc and isoform p52Shc, once phosphorylated, couple activated receptor tyrosine kinases to Ras via the recruitment of the GRB2/SOS complex and are implicated in the cytoplasmic propagation of mitogenic signals. Isoform p46Shc and isoform p52Shc may thus function as initiators of the Ras signaling cascade in various non-neuronal systems. Isoform p66Shc does not mediate Ras activation, but is involved in signal transduction pathways that regulate the cellular response to oxidative stress and life span. Isoform p66Shc acts as a downstream target of the tumor suppressor p53 and is indispensable for the ability of stress-activated p53 to induce elevation of intracellular oxidants, cytochrome c release and apoptosis. The expression of isoform p66Shc has been correlated with life span (By similarity). Participates in signaling downstream of the angiopoietin receptor TEK/TIE2, and plays a role in the regulation of endothelial cell migration and sprouting angiogenesis.::Homo sapiens (taxid: 9606) confident no hit no match PF00017::SH2 99.84::1-68 GO:0005159::insulin-like growth factor receptor binding confident hh_1mil_A_1::1-6,8-92 very confident psy10189 376 Q08012::Protein enhancer of sevenless 2B ::Required for proper signaling by sevenless. May act to stimulate the ability of Sos to catalyze Ras1 activation by linking sevenless and Sos in a signaling complex.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00017::SH2 99.82::239-313 GO:0005829::cytosol confident hh_1gri_A_1::1-211 very confident psy12414 71 P32577::Tyrosine-protein kinase CSK ::Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs) including LCK, SRC, HCK, FYN, LYN or YES1. Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane. Suppresses signaling by various surface receptors, including T-cell receptor (TCR) and B-cell receptor (BCR) by phosphorylating and maintaining inactive several positive effectors such as FYN or LCK.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00017::SH2 99.95::1-71 GO:0005911::cell-cell junction confident hh_1k9a_A_1::1-71 very confident psy5180 192 Q9QZK2::Breast cancer anti-estrogen resistance protein 3 ::May act as an adapter protein and couple activated growth factor receptors to signaling molecules that regulate src kinase activity and promote cell migration.::Mus musculus (taxid: 10090) portable no hit no match PF00017::SH2 99.85::33-113 GO:0007165::signal transduction confident hh_2eyz_A_1::24-119 very confident psy8554 148 Q64143::Phosphatidylinositol 3-kinase regulatory subunit gamma ::Binds to activated (phosphorylated) protein-tyrosine kinases through its SH2 domain and regulates their kinase activity. During insulin stimulation, it also binds to IRS-1.::Mus musculus (taxid: 10090) confident no hit no match PF00017::SH2 99.88::46-118 GO:0030168::platelet activation confident hh_2y3a_B_1::31-145 very confident psy13521 366 P09851::Ras GTPase-activating protein 1 ::Inhibitory regulator of the Ras-cyclic AMP pathway. Stimulates the GTPase of normal but not oncogenic Ras p21.::Bos taurus (taxid: 9913) confident no hit no match PF00017::SH2 99.79::59-132 GO:0030833::regulation of actin filament polymerization confident hh_4d8k_A_1::3-20,22-48,53-149 very confident psy3300 97 Q32PJ7::Tensin-4 ::May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton May promote apoptosis, via its cleavage by caspase-3 (By similarity). Cytoplasm, cytoskeleton.::Bos taurus (taxid: 9913) portable no hit no match PF00017::SH2 99.89::1-76 GO:0043229::intracellular organelle confident hh_3k2m_A_1::1-37,43-61,63-93 very confident psy3210 272 P27870::Proto-oncogene vav ::Couples tyrosine kinase signals with the activation of the Rho/Rac GTPases, thus leading to cell differentiation and/or proliferation.::Mus musculus (taxid: 10090) portable no hit no match PF00017::SH2 99.82::90-173 GO:0043234::protein complex confident hh_1gri_A_1::70-79,83-120,126-150,154-159,161-227,230-253 very confident psy12508 113 Q7M4L6::SH2 domain-containing adapter protein F ::Adapter protein which may play a role in the regulation of apoptosis in response to PDGF.::Homo sapiens (taxid: 9606) confident no hit no match PF00017::SH2 99.94::12-89 GO:0043234::protein complex confident hh_1mil_A_1::4-27,30-63,65-65,67-74,77-112 very confident psy6389 395 O75159::Suppressor of cytokine signaling 5 ::SOCS family proteins form part of a classical negative feedback system that regulates cytokine signal transduction. May be a substrate-recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Inhibits for instance EGF signaling by mediating the degradation of the EGF receptor/EGFR. Involved in the regulation of T-helper cell differentiation by inhibiting of the IL4 signaling pathway which promotes differentiation into the Th2 phenotype. Can also partially inhibit IL6 and LIF signaling.::Homo sapiens (taxid: 9606) confident no hit no match PF00017::SH2 99.75::244-322 GO:0045629::negative regulation of T-helper 2 cell differentiation confident rp_2izv_A_1::220-385 very confident psy2425 275 O61643::Inhibin beta chain ::Controls several aspects of neuronal morphogenesis; essential for optic lobe development, EcR-B1 expression in larval brains, mushroom body remodeling, dorsal neuron morphogenesis and motoneuron axon guidance. Ligands Actbeta and daw act redundantly through the Activin receptor Babo and its transcriptional mediator Smad2 (Smox), to regulate neuroblast numbers and proliferation rates in the developing larval brain.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00019::TGF_beta 100.00::172-275 GO:0002683::negative regulation of immune system process confident hh_2r52_A_1::171-212,215-275 very confident psy16788 423 Q90752::Bone morphogenetic protein 4 ::Negatively regulates the structure and function of the limb apical ectodermal ridge.::Gallus gallus (taxid: 9031) confident no hit no match PF00019::TGF_beta 100.00::290-421 GO:0045603::positive regulation of endothelial cell differentiation confident hh_2h62_A_1::288-301,330-378,380-421 very confident psy15092 225 P49002::Bone morphogenetic protein 3 ::Negatively regulates bone density. Antagonizes the ability of certain osteogenic BMPs to induce osteoprogenitor differentitation and ossification.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00019::TGF_beta 99.98::127-225 GO:0051248::negative regulation of protein metabolic process confident hh_2qcq_A_1::126-225 very confident psy3643 153 no hit no match no hit no match PF00021::UPAR_LY6 97.44::45-109 GO:0005737::cytoplasm confident hh_1ywh_A_2::15-15,17-25,27-27,32-54,56-60,65-73,84-109,119-132,134-146 confident psy10606 128 no hit no match no hit no match PF00021::UPAR_LY6 98.31::5-99 GO:0005737::cytoplasm confident hh_2h7z_B_1::4-18,27-33,47-74,81-81,83-83,86-91,93-100 confident psy10730 150 no hit no match no hit no match PF00021::UPAR_LY6 99.02::28-118 GO:0035633::maintenance of blood-brain barrier confident hh_2h7z_B_1::20-25,27-37,40-43,45-58,66-84,87-93,97-97,108-118 confident psy1624 346 no hit no match no hit no match PF00024::PAN_1 99.31::100-179 GO:0031012::extracellular matrix confident hh_4dur_A_1::101-113,116-163 confident psy3212 177 P24268::Cathepsin D ::Acid protease active in intracellular protein breakdown.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00026::Asp 100.00::8-177 GO:0005764::lysosome confident hh_1tzs_A_1::1-41,44-145,147-177 very confident psy11097 817 O15943::Neural-cadherin ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May associate with arm neural isoform and participate in the transmission of developmental information.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.65::686-813 GO:0005509::calcium ion binding confident hh_3ubf_A_1::23-187,229-245,247-282,298-370 very confident psy11095 102 O15943::Neural-cadherin ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May associate with arm neural isoform and participate in the transmission of developmental information.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00028::Cadherin 99.12::6-55 GO:0005509::calcium ion binding very confident hh_3qrb_A_1::7-93 very confident psy9968 118 Q24298::DE-cadherin ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. N-cadherin may be involved in neuronal recognition mechanism.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00028::Cadherin 99.70::1-104 GO:0005509::calcium ion binding confident hh_3q2w_A_2::2-11,13-45,68-71,75-118 very confident psy585 111 Q967F4::Cadherin-related hmr-1 ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. Isoform A is required for cell migration during body enclosure and cell shape changes during body elongation. Required for proper localization of other junctional components, such as hmp-1, hmp-2 and jac-1. Isoform b is involved in axonal guidance in a subset of motor neurons.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00028::Cadherin 97.60::51-78 GO:0005509::calcium ion binding confident hh_3q2v_A_2::1-44,46-82,84-109 very confident psy5884 195 O88277::Protocadherin Fat 2 ::May modulate the extracellular space surronding parallel fibers of cerebellar during development. Plays a role in the migration of epidermal cells.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00028::Cadherin 99.73::57-145 GO:0005902::microvillus confident hh_1q55_A_1::3-13,16-145,147-167,169-183 very confident psy5886 184 P55280::Cadherin-6 ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00028::Cadherin 99.71::107-181 GO:0005902::microvillus confident hh_3mvs_A_1::9-15,17-44,48-57,60-81,83-181 very confident psy6837 122 P33450::Cadherin-related tumor suppressor ::Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00028::Cadherin 99.87::37-115 GO:0005929::cilium confident hh_3mvs_A_1::4-72,74-122 very confident psy1887 653 Q91XU7::Cadherin-related family member 1 ::Potential calcium-dependent cell-adhesion protein. May be required for the structural integrity of the outer segment (OS) of photoreceptor cells.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00028::Cadherin 99.70::432-525 GO:0005929::cilium confident hh_3qrb_A_1::313-329,335-336,338-341,344-366,375-399,404-488,490-526 very confident psy11780 383 Q91XU7::Cadherin-related family member 1 ::Potential calcium-dependent cell-adhesion protein. May be required for the structural integrity of the outer segment (OS) of photoreceptor cells.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00028::Cadherin 99.72::184-305 GO:0007155::cell adhesion confident hh_3q2v_A_2::2-44,48-57,60-60,62-79,98-109,113-174,176-264,292-316,319-332,336-337,343-372 very confident psy13120 384 P33450::Cadherin-related tumor suppressor ::Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.73::186-281 GO:0007275::multicellular organismal development confident hh_3q2v_A_2::2-54,58-89,91-176,178-221,223-266,271-291,294-305,308-309,311-311,314-323,325-334,347-384 very confident psy11061 212 Q24292::Protein dachsous ::Involved in morphogenesis. May also be involved in cell adhesion.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.77::76-167 GO:0007275::multicellular organismal development confident hh_3mvs_A_1::1-10,12-51,53-113,116-133,136-173 very confident psy11062 281 Q24292::Protein dachsous ::Involved in morphogenesis. May also be involved in cell adhesion.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.79::86-179 GO:0007275::multicellular organismal development confident hh_3qrb_A_1::5-180 very confident psy14282 119 O15943::Neural-cadherin ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May associate with arm neural isoform and participate in the transmission of developmental information.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.51::52-118 GO:0007389::pattern specification process confident hh_3qrb_A_1::2-60,63-92,95-118 very confident psy7562 582 Q9VW71::Fat-like cadherin-related tumor suppressor homolog ::Required for the planar polarity of actin filament orientation at the basal side of ovarian follicle cells. Required for proper egg chamber shape; elongation of the egg chamber during oogenesis.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00028::Cadherin 99.73::430-521 GO:0016020::membrane confident hh_3mvs_A_1::314-347,349-360,364-402,406-467,470-527 very confident psy8623 68 Q24292::Protein dachsous ::Involved in morphogenesis. May also be involved in cell adhesion.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.79::1-67 GO:0016318::ommatidial rotation confident hh_3mvs_A_1::1-25,29-66 very confident psy8618 232 Q24292::Protein dachsous ::Involved in morphogenesis. May also be involved in cell adhesion.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.83::56-150 GO:0016318::ommatidial rotation confident hh_3q2v_A_2::2-53,55-63,65-92,97-154,156-187,190-232 very confident psy8617 184 no hit no match no hit no match PF00028::Cadherin 99.82::2-108 GO:0030154::cell differentiation confident hh_3mvs_A_1::2-18,22-33,57-94,98-182 very confident psy2920 325 O15943::Neural-cadherin ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May associate with arm neural isoform and participate in the transmission of developmental information.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00028::Cadherin 99.65::115-212 GO:0032502::developmental process confident hh_3qrb_A_1::1-15,17-20,25-48,62-126,137-201,204-213 very confident psy6838 442 P33450::Cadherin-related tumor suppressor ::Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00028::Cadherin 99.77::298-389 GO:0032502::developmental process confident hh_3q2v_A_2::17-35,37-40,43-55,91-134,138-269,302-305,307-334,336-393,395-442 very confident psy669 248 Q14517::Protocadherin Fat 1 ::Plays an essential role for cellular polarization, directed cell migration and modulating cell-cell contact.::Homo sapiens (taxid: 9606) confident no hit no match PF00028::Cadherin 99.82::55-148 GO:0032502::developmental process confident hh_3qrb_A_1::1-107,109-134,136-149 very confident psy8640 303 Q5DRB0::Protocadherin gamma-B1 ::Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.::Pan troglodytes (taxid: 9598) portable no hit no match PF00028::Cadherin 99.75::126-264 GO:0032502::developmental process confident hh_3mvs_A_1::14-35,37-44,51-81,83-94,102-164,176-200,241-270 very confident psy1041 1095 Q9VW71::Fat-like cadherin-related tumor suppressor homolog ::Required for the planar polarity of actin filament orientation at the basal side of ovarian follicle cells. Required for proper egg chamber shape; elongation of the egg chamber during oogenesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.65::968-1060 GO:0032502::developmental process confident hh_3qrb_A_1::861-880,882-885,888-936,941-1061 very confident psy7564 115 Q14517::Protocadherin Fat 1 ::Plays an essential role for cellular polarization, directed cell migration and modulating cell-cell contact.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 98.92::12-59 GO:0042995::cell projection confident hh_3qrb_A_1::13-88,96-114 very confident psy4200 388 Q9VGG5::Cadherin-87A ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00028::Cadherin 99.69::165-265 GO:0042995::cell projection confident hh_3q2v_A_2::19-36,38-78,81-89,137-226,231-242,245-248,253-286,288-294,297-332,334-371,374-384 very confident psy10256 96 Q14517::Protocadherin Fat 1 ::Plays an essential role for cellular polarization, directed cell migration and modulating cell-cell contact.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 98.73::2-41 GO:0043229::intracellular organelle confident hh_3ppe_A_1::1-94 very confident psy4697 383 Q6V0I7::Protocadherin Fat 4 ::May function in the regulation of planar cell polarity (By similarity). Cadherins are cell-cell interaction molecules.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 99.63::50-133 GO:0043229::intracellular organelle confident hh_3ubh_A_1::3-37,39-152,157-185,189-237 very confident psy7563 274 Q14517::Protocadherin Fat 1 ::Plays an essential role for cellular polarization, directed cell migration and modulating cell-cell contact.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 99.73::36-152 GO:0044446::intracellular organelle part confident hh_3mvs_A_1::26-50,52-84,113-139,142-203,206-222,225-230,233-249 very confident psy1047 127 Q9VW71::Fat-like cadherin-related tumor suppressor homolog ::Required for the planar polarity of actin filament orientation at the basal side of ovarian follicle cells. Required for proper egg chamber shape; elongation of the egg chamber during oogenesis.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00028::Cadherin 99.91::11-124 GO:0044446::intracellular organelle part confident hh_3ppe_A_1::1-50,53-58,60-64,85-96,98-124 very confident psy8629 483 Q24292::Protein dachsous ::Involved in morphogenesis. May also be involved in cell adhesion.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.70::348-438 GO:0044464::cell part confident hh_3q2v_A_2::12-97,129-163,165-192,194-210,215-258,260-304,308-358,362-383,387-424,427-450 very confident psy9047 110 Q9Y5F0::Protocadherin beta-13 ::Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 99.78::16-110 GO:0044464::cell part confident hh_3q2v_A_2::8-32,34-55,76-82,84-110 very confident psy26 1186 P33450::Cadherin-related tumor suppressor ::Could function as a cell-adhesion protein. Acts as a tumor suppressor. Required for correct morphogenesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00028::Cadherin 99.58::1045-1136 GO:0044763::single-organism cellular process confident hh_3q2v_A_2::513-521,525-536,538-543,547-731,733-760,762-818,820-890,892-933,936-950,954-976,978-1013,1019-1043 very confident psy9046 215 Q6V0I7::Protocadherin Fat 4 ::May function in the regulation of planar cell polarity (By similarity). Cadherins are cell-cell interaction molecules.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 99.65::29-129 GO:0044763::single-organism cellular process confident hh_3qrb_A_1::29-48,50-80,84-94,108-154,157-215 very confident psy8639 570 Q6V1P9::Protocadherin-23 ::Calcium-dependent cell-adhesion protein.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 99.59::283-377 GO:0044763::single-organism cellular process confident hh_3qrb_A_1::62-80,82-84,88-142,145-252,256-268 very confident psy8644 173 Q9ULB5::Cadherin-7 ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types.::Homo sapiens (taxid: 9606) portable no hit no match PF00028::Cadherin 99.52::112-172 GO:0044763::single-organism cellular process confident hh_3k5r_A_1::9-33,36-58,63-77,79-82,84-84,86-171 very confident psy11815 141 Q8R508::Protocadherin Fat 3 ::May play a role in the interactions between neurites derived from specific subsets of neurons during development.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00028::Cadherin 99.64::7-74 GO:0048856::anatomical structure development confident hh_2a4e_A_1::6-24,26-32,34-126,129-141 very confident psy1572 74 O75569::Interferon-inducible double stranded RNA-dependent protein kinase activator A ::Activates EIF2AK2/PKR in the absence of double stranded RNA (dsRNA), leading to phosphorylation of EIF2S1/EFI2-alpha and inhibition of translation and induction of apoptosis. Required for siRNA production by DICER1 and for subsequent siRNA-mediated post-transcriptional gene silencing. Does not seem to be required for processing of pre-miRNA to miRNA by DICER1.::Homo sapiens (taxid: 9606) portable no hit no match PF00035::dsrm 97.98::30-67 GO:0010586::miRNA metabolic process confident hh_1di2_A_1::27-39,42-42,44-68 confident psy20 147 P20700::Lamin-B1 ::Lamins are components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane, which is thought to provide a framework for the nuclear envelope and may also interact with chromatin.::Homo sapiens (taxid: 9606) portable no hit no match PF00038::Filament 99.87::58-147 GO:0005635::nuclear envelope confident hh_3s4r_A_1::54-98,102-147 very confident psy7537 224 P18583::Protein SON ::RNA-binding protein that acts as a mRNA splicing cofactor by promoting efficient splicing of transcripts that posses weak splice sites. Specifically promotes splicing of many cell-cycle and DNA-repair transcripts that posses weak splice sites, such as TUBG1, KATNB1, TUBGCP2, AURKB, PCNT, AKT1, RAD23A, and FANCG. Probably acts by facilitating the interaction between Serine/arginine-rich proteins such as SRSF2 and the RNA polymerase II. Also binds to DNA; binds to the consensus DNA sequence: 5'-GA[GT]AN[CG][AG]CC-3'. May indirectly repress hepatitis B virus (HBV) core promoter activity and transcription of HBV genes and production of HBV virions.::Homo sapiens (taxid: 9606) portable no hit no match PF00038::Filament 92.97::117-201 GO:0044446::intracellular organelle part confident hh_3ol1_A_1::120-139,142-201 portable psy6481 94 Q5ZIE8::Activating transcription factor 7-interacting protein 1 ::Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing histone methyltransferase activity. May belong to a complex that represses transcription and couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3).::Gallus gallus (taxid: 9031) confident no hit no match PF00041::fn3 92.46::2-59 GO:0003714::transcription corepressor activity confident hh_1x5x_A_1::3-16,22-32,37-59 confident psy816 138 Q5ZIE8::Activating transcription factor 7-interacting protein 1 ::Recruiter that couples transcriptional factors to general transcription apparatus and thereby modulates transcription regulation and chromatin formation. Can both act as an activator or a repressor depending on the context. Mediates MBD1-dependent transcriptional repression, probably by recruiting complexes containing histone methyltransferase activity. May belong to a complex that represses transcription and couples DNA methylation and histone H3 'Lys-9' trimethylation (H3K9me3).::Gallus gallus (taxid: 9031) portable no hit no match PF00041::fn3 98.77::30-122 GO:0005634::nucleus confident hh_3csg_A_1::31-35,37-50,54-73,76-80,85-89,92-115,118-131 confident psy17638 160 P20241::Neuroglian ::The long isoform may play a role in neural and glial cell adhesion in the developing embryo. The short isoform may be a more general cell adhesion molecule involved in other tissues and imaginal disk morphogenesis. Vital for embryonic development. Essential for septate junctions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion. Required for the blood-brain barrier formation.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00041::fn3 99.52::20-107 GO:0005887::integral to plasma membrane confident hh_1wfn_A_1::2-65,71-109 very confident psy5696 125 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00041::fn3 99.64::29-115 GO:0016477::cell migration confident hh_1x5h_A_1::7-22,25-74,76-124 very confident psy4958 65 P35992::Tyrosine-protein phosphatase 10D ::May have a role in axon outgrowth and guidance.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00041::fn3 95.88::2-25 GO:0030424::axon confident hh_3r8q_A_1::2-42,45-62 very confident psy7019 128 Q53EP0::Fibronectin type III domain-containing protein 3B ::May be a positive regulator of adipogenesis.::Homo sapiens (taxid: 9606) portable no hit no match PF00041::fn3 98.80::6-64 GO:0043231::intracellular membrane-bounded organelle confident hh_2crz_A_1::7-79 very confident psy5152 161 Q5RES1::Matrix metalloproteinase-14 ::Seems to specifically activate progelatinase A. May thus trigger invasion by tumor cells by activating progelatinase A on the tumor cell surface (By similarity). May be involved in actin cytoskeleton reorganization by cleaving PTK7.::Pongo abelii (taxid: 9601) portable no hit no match PF00045::Hemopexin 99.51::30-74 GO:0048523::negative regulation of cellular process confident hh_3c7x_A_1::2-36,38-106,108-159 very confident psy14246 286 A2ASQ1::Agrin ::Plays a central role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Ligand of the MUSK signaling complex that directly binds LRP4 in this complex and induces the phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane.::Mus musculus (taxid: 10090) portable no hit no match PF00050::Kazal_1 99.37::234-274 GO:0004867::serine-type endopeptidase inhibitor activity confident hh_3b4v_C_1::89-109,119-125,137-278 very confident psy11287 112 A2ASQ1::Agrin ::Plays a central role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Ligand of the MUSK signaling complex that directly binds LRP4 in this complex and induces the phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane.::Mus musculus (taxid: 10090) portable no hit no match PF00050::Kazal_1 99.50::48-88 GO:0005509::calcium ion binding confident hh_3b4v_C_1::13-105 very confident psy11285 189 P31696::Agrin ::Plays a central role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Ligand of the MUSK signaling complex that induces the phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane.::Gallus gallus (taxid: 9031) confident no hit no match PF00053::Laminin_EGF 98.79::35-77 GO:0005610::laminin-5 complex confident hh_4aqs_A_1::2-21,27-32,34-78,84-137,142-159 very confident psy15475 204 Q18823::Laminin-like protein lam-2 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00053::Laminin_EGF 98.52::122-164 GO:0005610::laminin-5 complex confident hh_1klo_A_1::20-79,81-82,85-168 very confident psy12862 98 Q90922::Netrin-1 ::Netrins control guidance of CNS commissural axons and peripheral motor axons. Promotes neurite outgrowth from commissural axons but acts as a chemorepellent for trochlear motor axons. These effects are mediated by distinct receptors.::Gallus gallus (taxid: 9031) confident no hit no match PF00053::Laminin_EGF 98.61::35-87 GO:0005794::Golgi apparatus confident hh_2y38_A_1::17-97 very confident psy15472 247 Q18823::Laminin-like protein lam-2 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00053::Laminin_EGF 98.56::57-98 GO:0016477::cell migration confident hh_4aqs_A_1::1-122,182-221,224-247 very confident psy11501 133 Q96KG7::Multiple epidermal growth factor-like domains protein 10 ::Membrane receptor involved in phagocytosis by macrophages of apoptotic cells. Cooperates with ABCA1 within the process of engulfment. Promotes the formation of large intracellular vacuoles and may be responsible for the uptake of amyloid-beta peptides. May also function in the mosaic spacing of specific neuron subtypes in the retina through homotypic retinal neuron repulsion. Mosaics provide a mechanism to distribute each cell type evenly across the retina, ensuring that all parts of the visual field have access to a full set of processing elements. May play role in cell adhesion and motility. Is also an essential factor in the regulation of myogenesis. Controls the balance between skeletal muscle satellite cells proliferation and differentiation problably through regulation of the notch signaling pathway.::Homo sapiens (taxid: 9606) confident no hit no match PF00053::Laminin_EGF 97.77::28-61 GO:0016477::cell migration confident hh_2gy5_A_1::7-121,123-133 very confident psy14221 546 P25391::Laminin subunit alpha-1 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Homo sapiens (taxid: 9606) portable no hit no match PF00053::Laminin_EGF 97.54::391-431 GO:0043229::intracellular organelle confident hh_4aqs_A_1::171-175,177-251,266-288,304-422 very confident psy4720 95 P15800::Laminin subunit beta-2 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00053::Laminin_EGF 99.12::12-54 GO:0060560::developmental growth involved in morphogenesis confident hh_2y38_A_1::10-19,23-77,80-93 very confident psy15473 190 Q1LVF0::Laminin subunit gamma-1 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Danio rerio (taxid: 7955) confident no hit no match PF00053::Laminin_EGF 98.32::113-145 GO:0070062::extracellular vesicular exosome confident hh_1klo_A_1::3-49,60-74,84-145 very confident psy5025 533 A3KN33::Pikachurin ::Involved in both the retinal photoreceptor ribbon synapse formation and physiological functions of visual perception. Necessary for proper bipolar dendritic tip apposition to the photoreceptor ribbon synapse. Promotes matrix assembly and cell adhesiveness.::Bos taurus (taxid: 9913) portable no hit no match PF00054::Laminin_G_1 99.90::345-507 GO:0005604::basement membrane confident hh_3pve_A_1::86-255 very confident psy12396 348 Q16363::Laminin subunit alpha-4 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Homo sapiens (taxid: 9606) portable no hit no match PF00054::Laminin_G_1 99.94::34-167 GO:0005605::basal lamina confident hh_2jd4_A_1::4-38,40-74,76-141,144-189,191-289,291-318,322-345 very confident psy7014 500 Q5R6R1::Protein eyes shut homolog (Fragment) ::Required to maintain the integrity of photoreceptor cells.::Pongo abelii (taxid: 9601) portable no hit no match PF00054::Laminin_G_1 99.90::97-298 GO:0005615::extracellular space confident hh_2vj3_A_1::317-361,364-422 very confident psy13333 114 Q94887::Neurexin-4 ::Seems to play a role in the formation and function of septate junctions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion. Required for the blood-brain barrier formation.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00054::Laminin_G_1 99.82::1-95 GO:0005919::pleated septate junction confident hh_3asi_A_2::1-36,39-54,60-96 very confident psy6122 98 Q6P9K9::Neurexin-3 ::Neuronal cell surface protein that may be involved in cell recognition and cell adhesion. May mediate intracellular signaling.::Mus musculus (taxid: 10090) confident no hit no match PF00054::Laminin_G_1 95.95::62-93 GO:0008306::associative learning confident hh_2h0b_A_1::25-45,49-93 very confident psy6121 126 Q9ULB1::Neurexin-1 ::Cell surface protein involved in cell-cell-interactions, excytosis of secretory granules and regulation of signal transmission. Function is isoform-specific. Alpha-type isoforms have a long N-terminus with six laminin G-like domains and play an important role in synaptic signal transmission. Alpha-type isoforms play a role in the regulation of calcium channel activity and Ca(2+)-triggered neurotransmitter release at synapses and at neuromuscular junctions. They play an important role in Ca(2+)-triggered exocytosis of secretory granules in pituitary gland. They may effect their functions at synapses and in endocrine cells via their interactions with proteins from the exocytotic machinery. Likewise, alpha-type isoforms play a role in regulating the activity of postsynaptic NMDA receptors, a subtype of glutamate-gated ion channels. Both alpha-type and beta-type isoforms may play a role in the formation or maintenance of synaptic junctions via their calcium-dependent interactions (via the extracellular domains) with neuroligin family members, CBLN1 or CBLN2. In vitro, triggers the de novo formation of presynaptic structures. May be involved in specification of excitatory synapses. Alpha-type isoforms were first identified as receptors for alpha-latroxin from spider venom.::Homo sapiens (taxid: 9606) portable no hit no match PF00054::Laminin_G_1 99.62::5-77 GO:0008306::associative learning confident hh_3qcw_A_1::2-76 very confident psy17302 244 Q9ULB1::Neurexin-1 ::Cell surface protein involved in cell-cell-interactions, excytosis of secretory granules and regulation of signal transmission. Function is isoform-specific. Alpha-type isoforms have a long N-terminus with six laminin G-like domains and play an important role in synaptic signal transmission. Alpha-type isoforms play a role in the regulation of calcium channel activity and Ca(2+)-triggered neurotransmitter release at synapses and at neuromuscular junctions. They play an important role in Ca(2+)-triggered exocytosis of secretory granules in pituitary gland. They may effect their functions at synapses and in endocrine cells via their interactions with proteins from the exocytotic machinery. Likewise, alpha-type isoforms play a role in regulating the activity of postsynaptic NMDA receptors, a subtype of glutamate-gated ion channels. Both alpha-type and beta-type isoforms may play a role in the formation or maintenance of synaptic junctions via their calcium-dependent interactions (via the extracellular domains) with neuroligin family members, CBLN1 or CBLN2. In vitro, triggers the de novo formation of presynaptic structures. May be involved in specification of excitatory synapses. Alpha-type isoforms were first identified as receptors for alpha-latroxin from spider venom.::Homo sapiens (taxid: 9606) portable no hit no match PF00054::Laminin_G_1 99.94::55-179 GO:0008306::associative learning confident hh_1pz7_A_1::16-26,28-32,35-137,141-183 very confident psy5026 293 A3KN33::Pikachurin ::Involved in both the retinal photoreceptor ribbon synapse formation and physiological functions of visual perception. Necessary for proper bipolar dendritic tip apposition to the photoreceptor ribbon synapse. Promotes matrix assembly and cell adhesiveness.::Bos taurus (taxid: 9913) portable no hit no match PF00054::Laminin_G_1 99.90::174-292 GO:0016043::cellular component organization confident hh_3pve_A_1::153-292 very confident psy1323 186 Q9ULB1::Neurexin-1 ::Cell surface protein involved in cell-cell-interactions, excytosis of secretory granules and regulation of signal transmission. Function is isoform-specific. Alpha-type isoforms have a long N-terminus with six laminin G-like domains and play an important role in synaptic signal transmission. Alpha-type isoforms play a role in the regulation of calcium channel activity and Ca(2+)-triggered neurotransmitter release at synapses and at neuromuscular junctions. They play an important role in Ca(2+)-triggered exocytosis of secretory granules in pituitary gland. They may effect their functions at synapses and in endocrine cells via their interactions with proteins from the exocytotic machinery. Likewise, alpha-type isoforms play a role in regulating the activity of postsynaptic NMDA receptors, a subtype of glutamate-gated ion channels. Both alpha-type and beta-type isoforms may play a role in the formation or maintenance of synaptic junctions via their calcium-dependent interactions (via the extracellular domains) with neuroligin family members, CBLN1 or CBLN2. In vitro, triggers the de novo formation of presynaptic structures. May be involved in specification of excitatory synapses. Alpha-type isoforms were first identified as receptors for alpha-latroxin from spider venom.::Homo sapiens (taxid: 9606) portable no hit no match PF00054::Laminin_G_1 99.96::13-155 GO:0019226::transmission of nerve impulse confident hh_2wjs_A_1::5-31,35-35,38-82,85-133,135-149,152-161,167-176 very confident psy2060 193 Q91ZI0::Cadherin EGF LAG seven-pass G-type receptor 3 ::Receptor that may have an important role in cell/cell signaling during nervous system formation.::Mus musculus (taxid: 10090) portable no hit no match PF00054::Laminin_G_1 98.95::141-193 GO:0032502::developmental process confident hh_3qcw_A_2::65-71,74-89,91-96,98-103,108-171,174-189 very confident psy9228 834 P98160::Basement membrane-specific heparan sulfate proteoglycan core protein ::The LG3 peptide has anti-angiogenic properties that require binding of calcium ions for full activity.::Homo sapiens (taxid: 9606) portable no hit no match PF00054::Laminin_G_1 99.92::682-814 GO:0044421::extracellular region part confident hh_1dyk_A_1::385-428,435-496,498-500,502-522,524-554,556-560,611-615,617-617,651-668,671-697,704-831 very confident psy9685 979 P10040::Protein crumbs ::Plays a central role in cell polarity establishment. Participates in the assembly, positioning and maintenance of adherens junctions via its interaction with the SAC complex. Controls the coalescence of the spots of zonula adherens (ZA) into a adhesive ring around the cells. It may act as a signal. Involved in morphogenesis of the photoreceptor rhabdomere, for positioning and growth of rhabdomere and AJ during the crucial period of photoreceptor extension along the proximodistal axis of the retina.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00054::Laminin_G_1 99.79::103-214 GO:0044699::single-organism process confident hh_2vj3_A_1::639-676,678-696,703-752 very confident psy6627 195 Q8VHY0::Chondroitin sulfate proteoglycan 4 ::Proteoglycan playing a role in cell proliferation and migration which stimulates endothelial cells motility during microvascular morphogenesis. May also inhibit neurite outgrowth and growth cone collapse during axon regeneration. Cell surface receptor for collagen alpha 2(VI) which may confer cells ability to migrate on that substrate. Binds through its extracellular N-terminus growth factors, extracellular matrix proteases modulating their activity. May regulate MPP16-dependent degradation and invasion of type I collagen participating in melanoma cells invasion properties. May modulate the plasminogen system by enhancing plasminogen activation and inhibiting angiostatin. Functions also as a signal transducing protein by binding through its cytoplasmic C-terminus scaffolding and signaling proteins. May promote retraction fiber formation and cell polarization through Rho GTPase activation. May stimulate alpha-4, beta-1 integrin-mediated adhesion and spreading by recruiting and activating a signaling cascade through CDC42, ACK1 and BCAR1. May activate FAK and ERK1/ERK2 signaling cascades.::Mus musculus (taxid: 10090) portable no hit no match PF00054::Laminin_G_1 99.94::45-170 GO:0044763::single-organism cellular process confident hh_3qcw_A_1::9-41,45-192 very confident psy57 135 O15230::Laminin subunit alpha-5 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Homo sapiens (taxid: 9606) confident no hit no match PF00055::Laminin_N 99.82::1-76 GO:0016477::cell migration confident hh_2y38_A_1::1-135 very confident psy15469 297 Q18823::Laminin-like protein lam-2 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00055::Laminin_N 100.00::5-238 GO:0016477::cell migration confident hh_4aqt_A_1::1-26,32-252,257-297 very confident psy6778 314 Q24568::Netrin-B ::Netrins control guidance of CNS commissural axons and peripheral motor axons. Its association with either fra or unc-5 receptors will lead to axon attraction or repulsion, respectively. While short-range repulsion requires both fra and unc-5 receptors, long-range repulsion only requires unc-5.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00055::Laminin_N 100.00::37-197 GO:0016477::cell migration confident hh_4aqt_A_1::23-58,60-106,110-138,141-256,259-302 very confident psy17215 174 Q90922::Netrin-1 ::Netrins control guidance of CNS commissural axons and peripheral motor axons. Promotes neurite outgrowth from commissural axons but acts as a chemorepellent for trochlear motor axons. These effects are mediated by distinct receptors.::Gallus gallus (taxid: 9031) confident no hit no match PF00055::Laminin_N 99.94::2-85 GO:0016477::cell migration confident hh_4aqt_A_1::69-87,97-105,107-154,158-174 very confident psy12394 1873 O15230::Laminin subunit alpha-5 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Homo sapiens (taxid: 9606) portable no hit no match PF00055::Laminin_N 99.81::1-88 GO:0044464::cell part confident hh_2y38_A_1::1-220 very confident psy12093 118 P25391::Laminin subunit alpha-1 ::Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components.::Homo sapiens (taxid: 9606) confident no hit no match PF00055::Laminin_N 99.96::5-114 GO:0051240::positive regulation of multicellular organismal process confident hh_2y38_A_1::6-25,28-52,56-113 very confident psy5508 85 O75096::Low-density lipoprotein receptor-related protein 4 ::Mediates SOST-dependent inhibition of bone formation. Functions as a specific facilitator of SOST-mediated inhibition of Wnt signaling. Plays a key role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Directly binds AGRIN and recruits it to the MUSK signaling complex. Mediates the AGRIN-induced phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane. Alternatively, may be involved in the negative regulation of the canonical Wnt signaling pathway, being able to antagonize the LRP6-mediated activation of this pathway. More generally, has been proposed to function as a cell surface endocytic receptor binding and internalizing extracellular ligands for degradation by lysosomes.::Homo sapiens (taxid: 9606) portable no hit no match PF00057::Ldl_recept_a 99.50::25-62 GO:0005488::binding confident hh_2gtl_M_1::22-60,62-65 very confident psy12307 106 no hit no match no hit no match PF00057::Ldl_recept_a 98.54::18-54 GO:0005576::extracellular region confident hh_2xrc_A_1::19-24,29-30,33-56 confident psy14262 482 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable no hit no match PF00057::Ldl_recept_a 98.91::4-45 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_1n7d_A_1::3-13,15-32,38-48,83-84,117-142,149-153,159-175,177-199,201-230,232-253,255-272,278-300,302-317,323-329,333-335,337-350,352-379,381-457,461-463,465-481 very confident psy5809 160 O75096::Low-density lipoprotein receptor-related protein 4 ::Mediates SOST-dependent inhibition of bone formation. Functions as a specific facilitator of SOST-mediated inhibition of Wnt signaling. Plays a key role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Directly binds AGRIN and recruits it to the MUSK signaling complex. Mediates the AGRIN-induced phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane. Alternatively, may be involved in the negative regulation of the canonical Wnt signaling pathway, being able to antagonize the LRP6-mediated activation of this pathway. More generally, has been proposed to function as a cell surface endocytic receptor binding and internalizing extracellular ligands for degradation by lysosomes.::Homo sapiens (taxid: 9606) portable no hit no match PF00057::Ldl_recept_a 99.28::48-84 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_1n7d_A_1::38-59,61-86,96-100,103-107,114-142 very confident psy954 337 A2ARV4::Low-density lipoprotein receptor-related protein 2 ::Acts together with cubilin to mediate HDL endocytosis.::Mus musculus (taxid: 10090) portable no hit no match PF00057::Ldl_recept_a 99.19::120-154 GO:0043231::intracellular membrane-bounded organelle confident hh_1n7d_A_2::114-116,119-154,157-163,168-183,188-212,214-219,226-248,251-290,292-295,298-336 very confident psy1294 105 O75197::Low-density lipoprotein receptor-related protein 5 ::Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Cell-surface coreceptor of Wnt/beta-catenin signaling, which plays a pivotal role in bone formation. The Wnt-induced Fzd/LRP6 coreceptor complex recruits DVL1 polymers to the plasma membrane which, in turn, recruits the AXIN1/GSK3B-complex to the cell surface promoting the formation of signalsomes and inhibiting AXIN1/GSK3-mediated phosphorylation and destruction of beta-catenin. Appears be required for postnatal control of vascular regression in the eye. Required for posterior patterning of the epiblast during gastrulation.::Homo sapiens (taxid: 9606) portable no hit no match PF00057::Ldl_recept_a 99.32::69-105 GO:0043234::protein complex confident hh_2fcw_B_1::25-28,30-35,39-45,47-72,74-105 very confident psy6537 66 P98160::Basement membrane-specific heparan sulfate proteoglycan core protein ::The LG3 peptide has anti-angiogenic properties that require binding of calcium ions for full activity.::Homo sapiens (taxid: 9606) confident no hit no match PF00057::Ldl_recept_a 99.52::28-64 GO:0043234::protein complex confident hh_2jm4_A_1::26-65 very confident psy17376 227 P98166::Very low-density lipoprotein receptor ::Binds VLDL and transports it into cells by endocytosis. In order to be internalized, the receptor-ligand complexes must first cluster into clathrin-coated pits. Binding to Reelin induces tyrosine phosphorylation of Dab1 and modulation of Tau phosphorylation.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00057::Ldl_recept_a 99.08::117-152 GO:0043234::protein complex confident hh_1n7d_A_1::2-60,63-66,77-174,192-205,208-225 very confident psy14260 73 Q07954::Prolow-density lipoprotein receptor-related protein 1 ::Functions as a receptor for Pseudomonas aeruginosa exotoxin A.::Homo sapiens (taxid: 9606) portable no hit no match PF00058::Ldl_recept_b 99.11::25-64 GO:0048523::negative regulation of cellular process confident hh_3v64_C_1::1-73 very confident psy1807 618 Q80T79::CUB and sushi domain-containing protein 3 ::::Mus musculus (taxid: 10090) portable no hit no match PF00059::Lectin_C 99.58::101-215 GO:0005488::binding confident hh_3erb_A_1::336-372,374-431,434-521 very confident psy4323 191 no hit no match no hit no match PF00059::Lectin_C 99.67::55-175 GO:0030246::carbohydrate binding confident hh_1j34_A_1::40-47,55-108,121-125,127-131,138-144,151-175 very confident psy2804 94 P19491::Glutamate receptor 2 ::Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00060::Lig_chan 95.71::30-61 GO:0043195::terminal bouton confident hh_3kg2_A_1::9-85 very confident psy2797 225 P19492::Glutamate receptor 3 ::Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. Binding of the excitatory neurotransmitter L-glutamate induces a conformation change, leading to the opening of the cation channel, and thereby converts the chemical signal to an electrical impulse. The receptor then desensitizes rapidly and enters a transient inactive state, characterized by the presence of bound agonist. In the presence of CACNG4 or CACNG7 or CACNG8, shows resensitization which is characterized by a delayed accumulation of current flux upon continued application of glutamate.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00060::Lig_chan 99.80::49-181 GO:0043195::terminal bouton confident hh_3kg2_A_1::1-90,102-216 very confident psy6615 227 Q61627::Glutamate receptor ionotropic, delta-1 ::Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists.::Mus musculus (taxid: 10090) portable no hit no match PF00060::Lig_chan 99.58::2-89 GO:0043195::terminal bouton confident hh_3kg2_A_1::2-90,92-111,115-137,148-196,199-209,214-222 very confident psy9686 769 P30201::Lysozyme C ::Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.::Macaca mulatta (taxid: 9544) portable no hit no match PF00062::Lys 100.00::279-403 GO:0005576::extracellular region confident hh_2fbd_A_1::279-292,294-376,383-397,400-402 very confident psy6911 263 P30201::Lysozyme C ::Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents.::Macaca mulatta (taxid: 9544) portable no hit no match PF00062::Lys 100.00::156-263 GO:0005576::extracellular region confident hh_1jug_A_1::156-197,199-252,258-263 very confident psy1306 109 P00187::Cytochrome P450 1A2 ::Cytochromes P450 are a group of heme-thiolate monooxygenases. In liver microsomes, this enzyme is involved in an NADPH-dependent electron transport pathway. It oxidizes a variety of structurally unrelated compounds, including steroids, fatty acids, and xenobiotics. Most active in catalyzing 2-hydroxylation.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF00067::p450 99.30::23-93 GO:0070887::cellular response to chemical stimulus confident hh_2hi4_A_1::19-40,43-105 very confident psy12201 116 P04054::Phospholipase A2 ::PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.::Homo sapiens (taxid: 9606) confident no hit no match PF00068::Phospholip_A2_1 100.00::1-104 GO:0005509::calcium ion binding confident hh_1le6_A_1::1-103 very confident psy12202 157 P04054::Phospholipase A2 ::PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.::Homo sapiens (taxid: 9606) portable no hit no match PF00068::Phospholip_A2_1 100.00::6-144 GO:0047498::calcium-dependent phospholipase A2 activity confident hh_1p7o_A_1::6-50,56-81,92-96,111-142 very confident psy18200 233 Q8RX66::Serine/threonine-protein kinase Nek3 ::May be involved in plant development processes.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF00069::Pkinase 99.90::2-151 GO:0004672::protein kinase activity confident hh_4g3f_A_1::2-36,39-125,127-144 very confident psy3778 1751 Q9BXM7::Serine/threonine-protein kinase PINK1, mitochondrial ::Protects against mitochondrial dysfunction during cellular stress, potentially by phosphorylating mitochondrial proteins. Involved in the clearance of damaged mitochondria via selective autophagy (mitophagy). It is necessary for PARK2 recruitment to dysfunctional mitochondria to initiate their degradation.::Homo sapiens (taxid: 9606) portable no hit no match PF00069::Pkinase 99.97::1319-1667 GO:0004674::protein serine/threonine kinase activity confident hh_3i6u_A_1::1316-1358,1366-1367,1370-1386,1391-1404,1434-1454,1456-1499,1502-1520,1527-1548,1553-1586,1609-1612,1624-1628,1631-1667,1677-1681 very confident psy9108 98 no hit no match no hit no match PF00069::Pkinase 94.71::23-45 GO:0005509::calcium ion binding confident hh_1iq5_B_1::74-97 confident psy9986 104 Q8VDF3::Death-associated protein kinase 2 ::Calcium/calmodulin-dependent serine/threonine kinase involved in multiple cellular signaling pathways that trigger cell survival, apoptosis, and autophagy. Capable of regulating both type I apoptotic and type II autophagic cell deaths signal. The former involves caspase activation, chromatin and mitochondrial condensation while the latter involves caspase-independent cell death in conjunction with accumulation of mature autophagic vesicles, plasma membrane blebs, and nuclear condensation without DNA degradation. Mediator of anoikis and a suppressor of beta-catenin-dependent anchorage-independent growth of malignant epithelial cells. May play a role in granulocytic maturation.::Mus musculus (taxid: 10090) portable no hit no match PF00069::Pkinase 98.32::1-68 GO:0005524::ATP binding confident hh_2y0a_A_1::1-68 very confident psy17425 84 Q13523::Serine/threonine-protein kinase PRP4 homolog ::Has a role in pre-mRNA splicing. Phosphorylates SF2/ASF.::Homo sapiens (taxid: 9606) confident no hit no match PF00069::Pkinase 98.46::32-80 GO:0005730::nucleolus confident hh_3uto_A_1::31-82 very confident psy5212 141 Q2LZZ7::Serine/threonine-protein kinase tricorner ::Has an important role, with fry, in controlling cell structure and proliferation of a variety of polarized outgrowths including epidermal hairs, bristles, arista laterals, and dendrites. Affects cellular morphogenesis by regulating the expression of target genes that encode cytoskeleton-interacting proteins and not via the direct modification of the cytoskeleton. Maintains the integrity of epidermal hairs and is an essential component of the signaling pathway regulating dendritic branching of sensory neurons.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident no hit no match PF00069::Pkinase 99.38::16-133 GO:0005829::cytosol confident hh_4aw2_A_1::9-98,100-133 very confident psy10832 90 Q8BTW9::Serine/threonine-protein kinase PAK 4 ::Serine/threonine protein kinase that plays a role in a variety of different signaling pathways including cytoskeleton regulation, cell migration, growth, proliferation or cell survival. Activation by various effectors including growth factor receptors or active CDC42 and RAC1 results in a conformational change and a subsequent autophosphorylation on several serine and/or threonine residues. Phosphorylates and inactivates the protein phosphatase SSH1, leading to increased inhibitory phosphorylation of the actin binding/depolymerizing factor cofilin. Decreased cofilin activity may lead to stabilization of actin filaments. Phosphorylates LIMK1, a kinase that also inhibits the activity of cofilin. Phosphorylates integrin beta5/ITGB5 and thus regulates cell motility. Phosphorylates ARHGEF2 and activates the downstream target RHOA that plays a role in the regulation of assembly of focal adhesions and actin stress fibers. Stimulates cell survival by phosphorylating the BCL2 antagonist of cell death BAD. Alternatively, inhibits apoptosis by preventing caspase-8 binding to death domain receptors in a kinase independent manner. Plays a role in cell-cycle progression by controlling levels of the cell-cycle regulatory protein CDKN1A and by phosphorylating RAN.::Mus musculus (taxid: 10090) confident no hit no match PF00069::Pkinase 98.88::2-69 GO:0005913::cell-cell adherens junction confident hh_2c30_A_1::1-88 very confident psy3074 481 O74456::Serine/threonine-protein kinase pef1 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF00069::Pkinase 99.85::271-460 GO:0007275::multicellular organismal development confident hh_1ua2_A_2::21-40,45-52,57-75,102-104,127-173,175-203 very confident psy5279 1310 Q54CY9::Probable myosin light chain kinase DDB_G0292624 ::May phosphorylate a specific serine in the N-terminus of a myosin light chain.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF00069::Pkinase 99.95::949-1052 GO:0031323::regulation of cellular metabolic process confident hh_2w4o_A_1::950-1003,1006-1053 very confident psy6359 413 Q38997::SNF1-related protein kinase catalytic subunit alpha KIN10 ::Catalytic subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase. In vitro, KIN10 exhibits kinase activity on sucrose phosphate synthase and the kinase activity is inhibited by PRL1. May be a subunit of a SCF ubiquitin ligase complex and thus be involved in proteasomal ubiquitination.::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF00069::Pkinase 99.75::88-295 GO:0031532::actin cytoskeleton reorganization confident hh_3i6u_A_1::86-297 very confident psy569 212 O88697::Serine/threonine-protein kinase 16 ::Membrane-associated protein kinase that phosphorylates on serine and threonine residues. In vitro substrates include DRG1, ENO1 and EIF4EBP1. Also autophosphorylates (By similarity). May be involved in secretory vesicle trafficking or intracellular signaling. May have a role in regulating stromal-epithelial interactions that occur during ductal morphogenesis in the mammary gland. May be involved in TGF-beta signaling. Able to autophosphorylate on Tyr residue; it is however unclear whether it has tyrosine-protein kinase toward other proteins.::Mus musculus (taxid: 10090) portable no hit no match PF00069::Pkinase 99.29::28-121 GO:0043231::intracellular membrane-bounded organelle confident hh_2buj_A_2::122-192,198-212 very confident psy1710 77 P40417::Mitogen-activated protein kinase ERK-A ::Required downstream of Raf in the sevenless (sev), torso (tor), and Drosophila EGF receptor homolog (DER) signal transduction pathways.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00069::Pkinase 96.64::29-72 GO:0043234::protein complex confident hh_3qyz_A_1::17-57,59-74 very confident psy14043 205 Q8BND3::WD repeat-containing protein 35 ::May promote CASP3 activation and TNF-stimulated apoptosis (By similarity). Required for ciliogenesis.::Mus musculus (taxid: 10090) confident no hit no match PF00069::Pkinase 99.61::2-96 GO:0043234::protein complex confident hh_3uto_A_1::3-102 very confident psy3254 177 Q12469::Serine/threonine-protein kinase SKM1 ::May be involved in cellular signalling or cytoskeletal functions. May play a role in morphogenetic control.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF00069::Pkinase 99.22::87-177 GO:0044699::single-organism process confident hh_3i6u_A_1::87-106,119-144,146-177 very confident psy7200 174 P67827::Casein kinase I isoform alpha ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.::Bos taurus (taxid: 9913) very confident no hit no match PF00069::Pkinase 99.47::105-172 GO:0046777::protein autophosphorylation very confident hh_2wtk_C_1::103-172 very confident psy15039 622 Q5ZK47::STE20-related kinase adapter protein alpha ::Pseudokinase which, in complex with CAB39/MO25 (CAB39/MO25alpha or CAB39L/MO25beta), binds to and activates STK11/LKB1. Adopts a closed conformation typical of active protein kinases and binds STK11/LKB1 as a pseudosubstrate, promoting conformational change of STK11/LKB1 in an active conformation.::Gallus gallus (taxid: 9031) portable no hit no match PF00069::Pkinase 100.00::11-305 GO:0046777::protein autophosphorylation confident hh_3gni_B_1::2-310 very confident psy10462 347 Q12263::Serine/threonine-protein kinase GIN4 ::Serine/threonine-protein kinase which regulates the localization and the function of the septins during mitosis. Phosphorylates SHS1.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF00069::Pkinase 99.95::7-170 GO:0048699::generation of neurons confident hh_3h4j_B_1::7-63,70-131,133-174 very confident psy4166 249 Q4WPF2::Serine/threonine-protein kinase atg1 ::Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable no hit no match PF00069::Pkinase 99.73::122-244 GO:0050896::response to stimulus confident hh_2y0a_A_1::122-171,175-245 very confident psy4322 2534 Q9LWM4::CBL-interacting protein kinase 5 ::CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium-dependent manner.::Oryza sativa subsp. japonica (taxid: 39947) portable no hit no match PF00069::Pkinase 99.75::2381-2532 GO:0051011::microtubule minus-end binding confident hh_2w4o_A_1::2382-2402,2407-2461,2463-2517,2520-2532 very confident psy7822 114 Q5E9Y0::Cyclin-dependent kinase 2 ::Serine/threonine-protein kinase involved in the control of the cell cycle; essential for meiosis, but dispensable for mitosis. Phosphorylates CTNNB1, USP37, p53/TP53, NPM1, CDK7, RB1, BRCA2, MYC, NPAT, EZH2. Interacts with cyclins A, B1, B3, D, or E. Triggers duplication of centrosomes and DNA. Acts at the G1-S transition to promote the E2F transcriptional program and the initiation of DNA synthesis, and modulates G2 progression; controls the timing of entry into mitosis/meiosis by controlling the subsequent activation of cyclin B/CDK1 by phosphorylation, and coordinates the activation of cyclin B/CDK1 at the centrosome and in the nucleus. Crucial role in orchestrating a fine balance between cellular proliferation, cell death, and DNA repair in human embryonic stem cells (hESCs). Activity of CDK2 is maximal during S phase and G2; activated by interaction with cyclin E during the early stages of DNA synthesis to permit G1-S transition, and subsequently activated by cyclin A2 (cyclin A1 in germ cells) during the late stages of DNA replication to drive the transition from S phase to mitosis, the G2 phase. EZH2 phosphorylation promotes H3K27me3 maintenance and epigenetic gene silencing. Phosphorylates CABLES1 (By similarity). Cyclin E/CDK2 prevents oxidative stress-mediated Ras-induced senescence by phosphorylating MYC. Involved in G1-S phase DNA damage checkpoint that prevents cells with damaged DNA from initiating mitosis; regulates homologous recombination-dependent repair by phosphorylating BRCA2, this phosphorylation is low in S phase when recombination is active, but increases as cells progress towards mitosis. In response to DNA damage, double-strand break repair by homologous recombination a reduction of CDK2-mediated BRCA2 phosphorylation. Phosphorylation of RB1 disturbs its interaction with E2F1. NPM1 phosphorylation by cyclin E/CDK2 promotes its dissociates from unduplicated centrosomes, thus initiating centrosome duplication. Cyclin E/CDK2-mediated phosphorylation of NPAT at G1-S transition and until prophase stimulates the NPAT-mediated activation of histone gene transcription during S phase. Required for vitamin D-mediated growth inhibition by being itself inactivated. Involved in the nitric oxide- (NO) mediated signaling in a nitrosylation/activation-dependent manner. USP37 is activated by phosphorylation and thus triggers G1-S transition. CTNNB1 phosphorylation regulates insulin internalization.::Bos taurus (taxid: 9913) confident no hit no match PF00069::Pkinase 97.91::22-58 GO:0051602::response to electrical stimulus confident hh_2b9h_A_2::17-62,65-88 very confident psy16459 143 Q6P3K7::Casein kinase I isoform delta-B ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.::Danio rerio (taxid: 7955) portable no hit no match PF00069::Pkinase 98.03::36-142 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_2izr_A_1::11-27,37-52,54-61,72-142 very confident psy9172 80 no hit no match no hit no match PF00076::RRM_1 90.88::32-64 GO:0003730::mRNA 3'-UTR binding confident hh_1sjr_A_1::4-51,53-62 very confident psy6597 305 Q02040::A-kinase anchor protein 17A ::Splice factor regulating alternative splice site selection for certain mRNA precursors. Mediates regulation of pre-mRNA splicing in a PKA-dependent manner.::Homo sapiens (taxid: 9606) confident no hit no match PF00076::RRM_1 97.39::156-249 GO:0051018::protein kinase A binding confident hh_2kvi_A_1::146-165,175-196,213-214,224-230,234-249 confident psy13898 185 Q80U30::Protein CLEC16A ::::Mus musculus (taxid: 10090) confident no hit no match PF00078::RVT_1 98.02::80-165 GO:0016021::integral to membrane confident hh_2zd1_A_1::48-69,71-74,79-93,97-98,102-132 portable psy13853 108 Q03333::Neuroendocrine convertase 2 ::Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues.::Sus scrofa (taxid: 9823) confident no hit no match PF00082::Peptidase_S8 96.37::12-106 GO:0006508::proteolysis very confident hh_1p8j_A_1::12-29,39-53,55-107 very confident psy2097 91 P23188::Furin ::Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.::Mus musculus (taxid: 10090) confident no hit no match PF00082::Peptidase_S8 91.48::19-78 GO:0043043::peptide biosynthetic process confident rp_1p8j_A_1::1-57 very confident psy13852 78 Q03333::Neuroendocrine convertase 2 ::Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues.::Sus scrofa (taxid: 9823) confident no hit no match PF00082::Peptidase_S8 95.32::8-54 GO:0043043::peptide biosynthetic process confident hh_1p8j_A_1::8-24,26-77 very confident psy5075 91 Q8MKK4::Facilitated trehalose transporter Tret1-2 homolog ::Fails to transport trehalose.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00083::Sugar_tr 97.87::26-88 GO:0015574::trehalose transmembrane transporter activity confident hh_4gc0_A_1::37-88 confident psy6641 87 no hit no match no hit no match PF00084::Sushi 99.67::20-76 GO:0044699::single-organism process confident hh_3erb_A_1::3-71,73-78 very confident psy14531 222 Q09101::Locomotion-related protein Hikaru genki ::Plays a role in the formation of functional neural circuits from the early stages of synapse formation. Has a role in the development of CNS functions involved in locomotor activity.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00084::Sushi 99.26::25-79 GO:0080134::regulation of response to stress confident hh_3erb_A_1::23-38,40-60,62-81,94-109,112-162,164-170,172-194,199-218 very confident psy5004 173 no hit no match no hit no match PF00087::Toxin_1 96.42::20-74 GO:0035151::regulation of tube size, open tracheal system confident hh_3hh7_A_1::21-30,33-33,35-35,43-75 portable psy4926 176 Q9GLX9::Spondin-1 ::Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS (By similarity). Major factor for vascular smooth muscle cell.::Bos taurus (taxid: 9913) portable no hit no match PF00090::TSP_1 99.18::31-79 GO:0005576::extracellular region confident no hit no match psy11988 156 Q8N8U9::BMP-binding endothelial regulator protein ::Inhibitor of bone morphogenetic protein (BMP) function, it may regulate BMP responsiveness of osteoblasts and chondrocytes.::Homo sapiens (taxid: 9606) portable no hit no match PF00093::VWC 99.46::36-92 GO:0005615::extracellular space confident hh_1u5m_A_1::35-51,54-81,83-94 confident psy10996 192 Q9JLL0::Cysteine-rich motor neuron 1 protein ::May play a role in CNS development by interacting with growth factors implicated in motor neuron differentiation and survival. May play a role in capillary formation and maintenance during angiogenesis. Modulates BMP activity by affecting its processing and delivery to the cell surface.::Mus musculus (taxid: 10090) portable no hit no match PF00093::VWC 99.51::125-178 GO:0005615::extracellular space confident hh_1u5m_A_1::122-184 confident psy9452 1789 no hit no match no hit no match PF00093::VWC 98.76::147-210 GO:0019898::extrinsic to membrane confident hh_1u5m_A_1::145-157,159-167,169-186,191-206,209-214 confident psy15162 70 O57472::Chordin ::Dorsalizing factor. Key developmental protein that dorsalizes early vertebrate embryonic tissues by binding to ventralizing TGF-beta family bone morphogenetic proteins (BMPs) and sequestering them in latent complexes.::Danio rerio (taxid: 7955) confident no hit no match PF00093::VWC 98.25::33-67 GO:0030336::negative regulation of cell migration confident hh_1u5m_A_1::29-49,58-67 portable psy10995 265 Q9JLL0::Cysteine-rich motor neuron 1 protein ::May play a role in CNS development by interacting with growth factors implicated in motor neuron differentiation and survival. May play a role in capillary formation and maintenance during angiogenesis. Modulates BMP activity by affecting its processing and delivery to the cell surface.::Mus musculus (taxid: 10090) portable no hit no match PF00093::VWC 99.37::79-135 GO:0032502::developmental process confident hh_1u5m_A_1::11-56,58-69 confident psy14031 280 Q8N8U9::BMP-binding endothelial regulator protein ::Inhibitor of bone morphogenetic protein (BMP) function, it may regulate BMP responsiveness of osteoblasts and chondrocytes.::Homo sapiens (taxid: 9606) portable no hit no match PF00094::VWD 99.97::8-159 GO:0005578::proteinaceous extracellular matrix confident hh_1lsh_B_1::4-13,15-53,60-69 portable psy10314 233 no hit no match no hit no match PF00094::VWD 99.96::18-167 GO:0005578::proteinaceous extracellular matrix confident hh_1wo9_A_1::1-17 portable psy3106 433 no hit no match no hit no match PF00100::Zona_pellucida 99.41::205-358 GO:0003383::apical constriction confident hh_2yil_A_1::49-66,69-90,97-97,99-114,119-132,136-154,156-164,168-177 confident psy8304 593 no hit no match no hit no match PF00100::Zona_pellucida 99.97::168-416 GO:0016324::apical plasma membrane confident hh_3nk4_A_1::164-227,238-274,277-289,291-309,312-378,381-382,385-421 confident psy10620 589 no hit no match no hit no match PF00100::Zona_pellucida 99.95::254-480 GO:0016324::apical plasma membrane very confident hh_3nk4_A_1::250-277,280-342,344-361,363-483 very confident psy5478 1009 no hit no match no hit no match PF00100::Zona_pellucida 99.94::1-247 GO:0016324::apical plasma membrane confident hh_3nk4_A_2::20-54,63-96,99-117,119-134,137-202,204-204,206-206,209-243,245-248 confident psy16319 246 no hit no match no hit no match PF00100::Zona_pellucida 99.85::47-241 GO:0016476::regulation of embryonic cell shape confident hh_3nk4_A_1::44-71,74-93,96-137,139-144,146-148,151-154,156-235 confident psy1623 522 no hit no match no hit no match PF00100::Zona_pellucida 99.92::129-392 GO:0031012::extracellular matrix confident hh_3nk4_A_1::126-153,156-174,177-220,223-230,232-232,235-246,249-311,345-390 confident psy5615 3061 Q61982::Neurogenic locus notch homolog protein 3 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). May play a role during CNS development.::Mus musculus (taxid: 10090) portable no hit no match PF00100::Zona_pellucida 99.83::2688-2915 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_3k6s_B_1::703-713,718-732,734-761,766-782,784-790,801-801,809-820,825-836,840-842,845-865,870-887,897-909,918-926 very confident psy12692 187 P33244::Nuclear hormone receptor FTZ-F1 ::Acts as a cofactor to fushi tarazu (ftz). Facilitates the binding of ftz to DNA. Binds the sequence element 5'-YCYYGGYCR-3' in the zebra element of ftz. Probably also functions as a receptor for a yet unknown ligand.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00104::Hormone_recep 99.35::39-168 GO:0000976::transcription regulatory region sequence-specific DNA binding confident hh_1lbd_A_1::39-93,96-186 very confident psy16761 261 P18102::Protein tailless ::Orphan receptor that binds DNA as a monomer to hormone response elements (HRE) containing an extended core motif half-site sequence 5'-AAGTCA-3' in which the 5' flanking nucleotides participate in determining receptor specificity. This receptor binds to the consensus sequence [AG][AG]AAGTCAA. Plays a key role in the establishment of non-metameric domains at the anterior and posterior poles of the embryo. It may also play a role in the nervous system. The maternal terminal pathway activates the tll gene in the termini; TLL activity then represses segmentation and activates terminal-specific genes in these domains. Involved in the regulation of early eye development. In the embryonic visual system anlage drives cells to optic lobe as opposed to Bolwig's organ fate.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00104::Hormone_recep 99.77::73-242 GO:0000981::sequence-specific DNA binding RNA polymerase II transcription factor activity confident hh_3p0u_A_1::73-159,181-244,246-260 very confident psy1615 295 Q06726::Nuclear receptor subfamily 2 group F member 5 ::Putative receptor that is required in photoreceptor cells precursors during eye development.::Danio rerio (taxid: 7955) portable no hit no match PF00104::Hormone_recep 99.87::2-163 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription very confident bp_3cjw_A_1::1-117 very confident psy6602 367 Q64104::Nuclear receptor subfamily 2 group E member 1 ::Orphan receptor that binds DNA as a monomer to hormone response elements (HRE) containing an extended core motif half-site sequence 5'-AAGGTCA-3' in which the 5' flanking nucleotides participate in determining receptor specificity (By similarity). Regulates cell cycle progression in neural stem cells of rhe developing brain. Involved in the regulation of retinal development and essential for vision. During retinogenesis, regulates PTEN-Cyclin D expression via binding to the promoter region of PTEN and suppressing its activity. May be involved in retinoic acid receptor (RAR) regulation in retinal cells.::Mus musculus (taxid: 10090) confident no hit no match PF00104::Hormone_recep 99.93::83-263 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_3cjw_A_1::86-284 very confident psy7203 92 O09018::COUP transcription factor 2 ::Ligand-activated transcription factor. Activated by high concentrations of 9-cis-retinoic acid and all-trans-retinoic acid, but not by dexamethasone, cortisol or progesterone (in vitro). Regulation of the apolipoprotein A-I gene transcription. Binds to DNA site A.::Rattus norvegicus (taxid: 10116) very confident no hit no match PF00104::Hormone_recep 98.61::2-64 GO:0001764::neuron migration very confident rp_3cjw_A_1::2-89 very confident psy16764 113 P16375::Steroid receptor seven-up, isoforms B/C ::Receptor that is required in photoreceptors R1, R3, R4 and R6 during eye development; generation of the ganglion mother cell-2 (GMC-2) fate in the nb7-3 lineage, coinciding with the transition in the expression of HB to KR in the neuroblasts (NBs).::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00104::Hormone_recep 99.56::2-94 GO:0005634::nucleus confident hh_1lbd_A_1::2-29,34-96,98-112 very confident psy11505 312 P62509::Estrogen-related receptor gamma ::Orphan receptor that acts as transcription activator in the absence of bound ligand. Binds specifically to an estrogen response element and activates reporter genes controlled by estrogen response elements.::Mus musculus (taxid: 10090) confident no hit no match PF00104::Hormone_recep 99.73::98-282 GO:0016477::cell migration confident hh_1lbd_A_1::28-54,58-60,65-162,164-204,247-310 very confident psy3123 585 O77245::Nuclear hormone receptor E75 ::::Metapenaeus ensis (taxid: 32278) portable no hit no match PF00104::Hormone_recep 99.93::116-296 GO:0030522::intracellular receptor signaling pathway confident hh_3cqv_A_1::103-297 very confident psy17882 181 Q9TTF0::Photoreceptor-specific nuclear receptor ::Orphan nuclear receptor of retinal photoreceptor cells. Transcriptional factor that is an activator of rod development and repressor of cone development. Binds the promoter region of a number of rod- and cone-specific genes, including rhodopsin, M-and S-opsin and rod-specific phosphodiesterase beta subunit. Enhances rhodopsin expression. Represses M- and S-cone opsin expression.::Bos taurus (taxid: 9913) confident no hit no match PF00104::Hormone_recep 99.96::2-166 GO:0048699::generation of neurons confident hh_1lbd_A_1::2-45,48-181 very confident psy12688 222 P33244::Nuclear hormone receptor FTZ-F1 ::Acts as a cofactor to fushi tarazu (ftz). Facilitates the binding of ftz to DNA. Binds the sequence element 5'-YCYYGGYCR-3' in the zebra element of ftz. Probably also functions as a receptor for a yet unknown ligand.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00105::zf-C4 99.90::128-197 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident hh_1dsz_A_1::126-206 very confident psy16683 139 P13054::Knirps-related protein ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00105::zf-C4 99.91::3-72 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_1dsz_A_1::2-36,38-83 very confident psy6599 93 Q64104::Nuclear receptor subfamily 2 group E member 1 ::Orphan receptor that binds DNA as a monomer to hormone response elements (HRE) containing an extended core motif half-site sequence 5'-AAGGTCA-3' in which the 5' flanking nucleotides participate in determining receptor specificity (By similarity). Regulates cell cycle progression in neural stem cells of rhe developing brain. Involved in the regulation of retinal development and essential for vision. During retinogenesis, regulates PTEN-Cyclin D expression via binding to the promoter region of PTEN and suppressing its activity. May be involved in retinoic acid receptor (RAR) regulation in retinal cells.::Mus musculus (taxid: 10090) confident no hit no match PF00105::zf-C4 99.95::16-89 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription very confident hh_1dsz_A_1::15-58,63-93 very confident psy16245 113 Q64104::Nuclear receptor subfamily 2 group E member 1 ::Orphan receptor that binds DNA as a monomer to hormone response elements (HRE) containing an extended core motif half-site sequence 5'-AAGGTCA-3' in which the 5' flanking nucleotides participate in determining receptor specificity (By similarity). Regulates cell cycle progression in neural stem cells of rhe developing brain. Involved in the regulation of retinal development and essential for vision. During retinogenesis, regulates PTEN-Cyclin D expression via binding to the promoter region of PTEN and suppressing its activity. May be involved in retinoic acid receptor (RAR) regulation in retinal cells.::Mus musculus (taxid: 10090) confident no hit no match PF00105::zf-C4 99.93::40-112 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription very confident hh_1dsz_A_1::38-81,86-113 very confident psy752 123 O08580::Steroid hormone receptor ERR1 ::Binds to an ERR-alpha response element (ERRE) containing a single consensus half-site, 5'-TNAAGGTCA-3'. Can bind to the medium-chain acyl coenzyme A dehydrogenase (MCAD) response element NRRE-1 and may act as an important regulator of MCAD promoter. Binds to the C1 region of the lactoferrin gene promoter. Requires dimerization and the coactivator, PGC-1A, for full activity. The ERRalpha/PGC1alpha complex is a regulator of energy metabolism.::Mus musculus (taxid: 10090) confident no hit no match PF00105::zf-C4 98.92::2-37 GO:0005975::carbohydrate metabolic process very confident rp_1ynw_B_1::1-62 very confident psy9232 119 P06536::Glucocorticoid receptor ::Receptor for glucocorticoids (GC). Has a dual mode of action: as a transcription factor that binds to glucocorticoid response elements (GRE) and as a modulator of other transcription factors. Affects inflammatory responses, cellular proliferation and differentiation in target tissues. Could act as a coactivator for STAT5-dependent transcription upon growth hormone (GH) stimulation and could reveal an essential role of hepatic GR in the control of body growth. Involved in chromatin remodeling. Plays a significant role in transactivation. Involved in nuclear translocation.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00105::zf-C4 99.75::1-56 GO:0030154::cell differentiation confident hh_1dsz_A_1::2-12,14-66 very confident psy11507 113 O08580::Steroid hormone receptor ERR1 ::Binds to an ERR-alpha response element (ERRE) containing a single consensus half-site, 5'-TNAAGGTCA-3'. Can bind to the medium-chain acyl coenzyme A dehydrogenase (MCAD) response element NRRE-1 and may act as an important regulator of MCAD promoter. Binds to the C1 region of the lactoferrin gene promoter. Requires dimerization and the coactivator, PGC-1A, for full activity. The ERRalpha/PGC1alpha complex is a regulator of energy metabolism.::Mus musculus (taxid: 10090) portable no hit no match PF00105::zf-C4 99.88::40-104 GO:0030522::intracellular receptor signaling pathway confident hh_1lo1_A_1::38-112 very confident psy3092 347 Q0GFF6::Retinoic acid receptor RXR-gamma ::Receptor for retinoic acid. Retinoic acid receptors bind as heterodimers to their target response elements in response to their ligands, all-trans or 9-cis retinoic acid, and regulate gene expression in various biological processes. The RAR/RXR heterodimers bind to the retinoic acid response elements (RARE) composed of tandem 5'-AGGTCA-3' sites known as DR1-DR5. The high affinity ligand for RXRs is 9-cis retinoic acid.::Sus scrofa (taxid: 9823) very confident no hit no match PF00105::zf-C4 99.95::57-125 GO:0031641::regulation of myelination very confident hh_1lbd_A_1::116-346 very confident psy1782 90 P49866::Transcription factor HNF-4 homolog ::Transcriptionally controlled transcription factor. Important for the differentiation of various specialized cell types that arise from both endoderm and mesoderm. May have a role in early gut formation.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00105::zf-C4 99.14::1-33 GO:0034440::lipid oxidation confident hh_1ynw_B_1::1-47 very confident psy16825 183 O08580::Steroid hormone receptor ERR1 ::Binds to an ERR-alpha response element (ERRE) containing a single consensus half-site, 5'-TNAAGGTCA-3'. Can bind to the medium-chain acyl coenzyme A dehydrogenase (MCAD) response element NRRE-1 and may act as an important regulator of MCAD promoter. Binds to the C1 region of the lactoferrin gene promoter. Requires dimerization and the coactivator, PGC-1A, for full activity. The ERRalpha/PGC1alpha complex is a regulator of energy metabolism.::Mus musculus (taxid: 10090) confident no hit no match PF00105::zf-C4 99.95::11-80 GO:0046982::protein heterodimerization activity confident bp_1lo1_A_1::8-100 very confident psy9231 134 Q64104::Nuclear receptor subfamily 2 group E member 1 ::Orphan receptor that binds DNA as a monomer to hormone response elements (HRE) containing an extended core motif half-site sequence 5'-AAGGTCA-3' in which the 5' flanking nucleotides participate in determining receptor specificity (By similarity). Regulates cell cycle progression in neural stem cells of rhe developing brain. Involved in the regulation of retinal development and essential for vision. During retinogenesis, regulates PTEN-Cyclin D expression via binding to the promoter region of PTEN and suppressing its activity. May be involved in retinoic acid receptor (RAR) regulation in retinal cells.::Mus musculus (taxid: 10090) confident no hit no match PF00105::zf-C4 99.92::63-131 GO:0046982::protein heterodimerization activity confident hh_1dsz_A_1::61-134 very confident psy13208 120 Q9TTF0::Photoreceptor-specific nuclear receptor ::Orphan nuclear receptor of retinal photoreceptor cells. Transcriptional factor that is an activator of rod development and repressor of cone development. Binds the promoter region of a number of rod- and cone-specific genes, including rhodopsin, M-and S-opsin and rod-specific phosphodiesterase beta subunit. Enhances rhodopsin expression. Represses M- and S-cone opsin expression.::Bos taurus (taxid: 9913) portable no hit no match PF00105::zf-C4 99.74::2-66 GO:0048699::generation of neurons confident hh_1dsz_A_1::2-16,21-36,38-76 very confident psy2636 335 P22829::Nuclear receptor subfamily 4 group A member 1 ::Orphan nuclear receptor. May act concomitantly with NURR1 in regulating the expression of delayed-early genes during liver regeneration. Binds the NGFI-B response element (NBRE) 5'-AAAAGGTCA-3'. May inhibit NF-kappa-B transactivation of IL2.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00105::zf-C4 99.97::41-110 GO:0048731::system development confident hh_1pdu_A_1::219-302,304-335 very confident psy7884 240 P45447::Ecdysone-induced protein 78C ::Induces the early late puff 78C which triggers puparium formation and development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00105::zf-C4 99.77::2-49 GO:0050896::response to stimulus confident hh_3dzy_D_1::2-19,22-73,79-79,99-236 very confident psy12574 244 Q91029::Protein Wnt-1 (Fragment) ::Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule important in CNS development. Is likely to signal over only few cell diameters. Proeminent role in the induction of the mesencephalon and cerebellum.::Gallus gallus (taxid: 9031) confident no hit no match PF00110::wnt 100.00::95-244 GO:0005771::multivesicular body confident hh_4f0a_B_1::97-141,154-202,215-244 very confident psy11778 324 P28465::Protein Wnt-2 ::Binds as a ligand to a family of frizzled seven-transmembrane receptors and acts through a cascade of genes on the nucleus. Segment polarity protein. May function in gonadogenesis and limb development. Wg and Wnt2 have a role in the developing trachea and together are responsible for all dorsal trunk formation.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00110::wnt 100.00::54-324 GO:0007166::cell surface receptor signaling pathway confident hh_4f0a_B_1::38-72,76-78,80-89,92-94,97-98,101-142,144-145,179-179,181-324 very confident psy13231 100 P34889::Protein Wnt-2 ::Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00110::wnt 99.90::28-100 GO:0009790::embryo development confident hh_4f0a_B_1::48-82,84-100 very confident psy11169 66 O73864::Protein Wnt-11 ::Ligand for members of the frizzled family of seven transmembrane receptors. May play a role in the formation of dermal structure, both limb and feather buds. Is likely to signal over only few cell diameters.::Danio rerio (taxid: 7955) portable no hit no match PF00110::wnt 99.91::2-65 GO:0010468::regulation of gene expression confident hh_4f0a_B_1::9-49,51-65 confident psy16581 194 P41221::Protein Wnt-5a ::Ligand for members of the frizzled family of seven transmembrane receptors. Can activate or inhibit canonical Wnt signaling, depending on receptor context. In the presence of FZD4, activates beta-catenin signaling. In the presence of ROR2, inhibits the canonical Wnt pathway by promoting beta-catenin degradation through a GSK3-independent pathway which involves down-regulation of beta-catenin-induced reporter gene expression. Suppression of the canonical pathway allows chondrogenesis to occur and inhibits tumor formation. Stimulates cell migration. Decreases proliferation, migration, invasiveness and clonogenicity of carcinoma cells and may act as a tumor suppressor. Mediates motility of melanoma cells. Required during embryogenesis for extension of the primary anterior-posterior axis and for outgrowth of limbs and the genital tubercle. Inhibits type II collagen expression in chondrocytes.::Homo sapiens (taxid: 9606) confident no hit no match PF00110::wnt 100.00::14-192 GO:0021846::cell proliferation in forebrain confident hh_4f0a_B_1::15-192 very confident psy16604 194 P41221::Protein Wnt-5a ::Ligand for members of the frizzled family of seven transmembrane receptors. Can activate or inhibit canonical Wnt signaling, depending on receptor context. In the presence of FZD4, activates beta-catenin signaling. In the presence of ROR2, inhibits the canonical Wnt pathway by promoting beta-catenin degradation through a GSK3-independent pathway which involves down-regulation of beta-catenin-induced reporter gene expression. Suppression of the canonical pathway allows chondrogenesis to occur and inhibits tumor formation. Stimulates cell migration. Decreases proliferation, migration, invasiveness and clonogenicity of carcinoma cells and may act as a tumor suppressor. Mediates motility of melanoma cells. Required during embryogenesis for extension of the primary anterior-posterior axis and for outgrowth of limbs and the genital tubercle. Inhibits type II collagen expression in chondrocytes.::Homo sapiens (taxid: 9606) confident no hit no match PF00110::wnt 100.00::14-192 GO:0021846::cell proliferation in forebrain confident hh_4f0a_B_1::15-192 very confident psy12572 366 Q1KYL1::Protein Wnt-7a ::Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. Signaling by Wnt-7a allows sexually dimorphic development of the mullerian ducts.::Pan troglodytes (taxid: 9598) confident no hit no match PF00110::wnt 100.00::7-366 GO:0071425::hematopoietic stem cell proliferation confident hh_4f0a_B_1::24-67,79-113,153-158,164-191,193-366 very confident psy2958 129 P28465::Protein Wnt-2 ::Binds as a ligand to a family of frizzled seven-transmembrane receptors and acts through a cascade of genes on the nucleus. Segment polarity protein. May function in gonadogenesis and limb development. Wg and Wnt2 have a role in the developing trachea and together are responsible for all dorsal trunk formation.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00110::wnt 99.98::1-115 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4f0a_B_1::1-50,67-116 very confident psy12571 159 P43446::Protein Wnt-10a ::Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule important in CNS development. Is likely to signal over only few cell diameters.::Danio rerio (taxid: 7955) portable no hit no match PF00110::wnt 99.86::5-88 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4f0a_B_1::16-56,61-88 confident psy9089 200 P43446::Protein Wnt-10a ::Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule important in CNS development. Is likely to signal over only few cell diameters.::Danio rerio (taxid: 7955) portable no hit no match PF00110::wnt 100.00::1-181 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4f0a_B_1::1-54,62-62,67-76,83-85,94-130,132-181 very confident psy9730 140 P49337::Protein Wnt-4 ::Ligand for members of the frizzled family of seven transmembrane receptors. May be an intracellular signaling molecule involved in segmentation of the forebrain into the neuromere D2 and in differentiation of the dorsal region of the spinal cord. Is likely to signal over only few cell diameters.::Gallus gallus (taxid: 9031) portable no hit no match PF00110::wnt 100.00::1-140 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4f0a_B_1::1-23,25-140 very confident psy227 139 Q2QL96::Protein Wnt-2 ::Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.::Monodelphis domestica (taxid: 13616) portable no hit no match PF00110::wnt 100.00::14-138 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4f0a_B_1::15-60,64-94,118-138 very confident psy17095 275 Q5NVK2::Protein Wnt-5b ::Ligand for members of the frizzled family of seven transmembrane receptors. Probable developmental protein. May be a signaling molecule which affects the development of discrete regions of tissues. Is likely to signal over only few cell diameters.::Pongo abelii (taxid: 9601) portable no hit no match PF00110::wnt 100.00::36-187 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_4f0a_B_1::53-86,103-189 very confident psy13753 229 Q9WTQ0::Protein kinase C theta type ::Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that mediates non-redundant functions in T-cell receptor (TCR) signaling, including T-cells activation, proliferation, differentiation and survival, by mediating activation of multiple transcription factors such as NF-kappa-B, JUN, NFATC1 and NFATC2. In TCR-CD3/CD28-co-stimulated T-cells, is required for the activation of NF-kappa-B and JUN, which in turn are essential for IL2 production, and participates to the calcium-dependent NFATC1 and NFATC2 transactivation. Mediates the activation of the canonical NF-kappa-B pathway (NFKB1) by direct phosphorylation of CARD11 on several serine residues, inducing CARD11 association with lipid rafts and recruitment of the BCL10-MALT1 complex, which then activates IKK complex, resulting in nuclear translocation and activation of NFKB1. May also play an indirect role in activation of the non-canonical NF-kappa-B (NFKB2) pathway. In the signaling pathway leading to JUN activation, acts by phosphorylating the mediator STK39/SPAK and may not act through MAP kinases signaling. Plays a critical role in TCR/CD28-induced NFATC1 and NFATC2 transactivation by participating in the regulation of reduced inositol 1,4,5-trisphosphate generation and intracellular calcium mobilization. After costimulation of T-cells through CD28 can phosphorylate CBLB and is required for the ubiquitination and subsequent degradation of CBLB, which is a prerequisite for the activation of TCR. During T-cells differentiation, plays an important role in the development of T-helper 2 (Th2) cells following immune and inflammatory responses, and, in the development of inflammatory autoimmune diseases, is necessary for the activation of IL17-producing Th17 cells. May play a minor role in Th1 response. Upon TCR stimulation, mediates T-cell protective survival signal by phosphorylating BAD, thus protecting T-cells from BAD-induced apoptosis, and by up-regulating BCL-X(L)/BCL2L1 levels through NF-kappa-B and JUN pathways. In platelets, regulates signal transduction downstream of the ITGA2B, CD36/GP4, F2R/PAR1 and F2RL3/PAR4 receptors, playing a positive role in 'outside-in' signaling and granule secretion signal transduction. May relay signals from the activated ITGA2B receptor by regulating the uncoupling of WASP and WIPF1, thereby permitting the regulation of actin filament nucleation and branching activity of the Arp2/3 complex. May mediate inhibitory effects of free fatty acids on insulin signaling by phosphorylating IRS1, which in turn blocks IRS1 tyrosine phosphorylation and downstream activation of the PI3K/AKT pathway. Phosphorylates MSN (moesin) in the presence of phosphatidylglycerol or phosphatidylinositol (By similarity). Phosphorylates PDPK1 at 'Ser-504' and 'Ser-532' and negatively regulates its ability to phosphorylate PKB/AKT1.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00130::C1_1 99.47::5-56 GO:0004697::protein kinase C activity confident hh_3pfq_A_1::3-62,81-82,93-96,123-131,133-179 very confident psy1485 252 P10102::Protein kinase C alpha type ::Calcium-activated, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that is involved in positive and negative regulation of cell proliferation, apoptosis, differentiation, migration and adhesion, cardiac hypertrophy, angiogenesis, platelet function and inflammation, by directly phosphorylating targets such as RAF1, BCL2, CSPG4, TNNT2/CTNT, or activating signaling cascade involving MAPK1/3 (ERK1/2) and RAP1GAP. Depending on the cell type, is involved in cell proliferation and cell growth arrest by positive and negative regulation of the cell cycle. Can promote cell growth by phosphorylating and activating RAF1, which mediates the activation of the MAPK/ERK signaling cascade, and/or by up-regulating CDKN1A, which facilitates active cyclin-dependent kinase (CDK) complex formation. In cells stimulated by the phorbol ester PMA, can trigger a cell cycle arrest program which is associated with the accumulation of the hyper-phosphorylated growth-suppressive form of RB1 and induction of the CDK inhibitors CDKN1A and CDKN1B. Depending on the cell type, exhibits anti-apoptotic function and protects cells from apoptosis by suppressing the p53/TP53-mediated activation of IGFBP3, or mediates anti-apoptotic action by phosphorylating BCL2. During macrophage differentiation induced by macrophage colony-stimulating factor (CSF1), is translocated to the nucleus and is associated with macrophage development. After wounding, translocates from focal contacts to lamellipodia and participates in the modulation of desmosomal adhesion. Plays a role in cell motility by phosphorylating CSPG4, which induces association of CSPG4 with extensive lamellipodia at the cell periphery and polarization of the cell accompanied by increases in cell motility. Negatively regulates myocardial contractility and positively regulates angiogenesis, platelet aggregation and thrombus formation in arteries. Mediates hypertrophic growth of neonatal cardiomyocytes, in part through a MAPK1/3 (ERK1/2)-dependent signaling pathway, and upon PMA treatment, is required to induce cardiomyocyte hypertrophy up to heart failure and death, by increasing protein synthesis, protein-DNA ratio and cell surface area. Regulates cardiomyocyte function by phosphorylating cardiac troponin T (TNNT2/CTNT), which induces significant reduction in actomyosin ATPase activity, myofilament calcium sensitivity and myocardial contractility. In angiogenesis, is required for full endothelial cell migration, adhesion to vitronectin (VTN), and vascular endothelial growth factor A (VEGFA)-dependent regulation of kinase activation and vascular tube formation. Involved in the stabilization of VEGFA mRNA at post-transcriptional level and mediates VEGFA-induced cell proliferation. In the regulation of calcium-induced platelet aggregation, mediates signals from the CD36/GP4 receptor for granule release, and activates the integrin heterodimer ITGA2B-ITGB3 through the RAP1GAP pathway for adhesion. During response to lipopolysaccharides (LPS), may regulate selective LPS-induced macrophage functions involved in host defense and inflammation. But in some inflammatory responses, may negatively regulate NF-kappa-B-induced genes, through IL1A-dependent induction of NF-kappa-B inhibitor alpha (NFKBIA/IKBA). Upon stimulation with 12-O-tetradecanoylphorbol-13-acetate (TPA), phosphorylates EIF4G1, which modulates EIF4G1 binding to MKNK1 and may be involved in the regulation of EIF4E phosphorylation. Phosphorylates KIT, leading to inhibition of KIT activity.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF00130::C1_1 99.40::138-190 GO:0005886::plasma membrane confident hh_3pfq_A_1::128-159,161-196,202-239 very confident psy9785 63 P05130::Protein kinase C, brain isozyme ::PKC is activated by diacylglycerol which in turn phosphorylates a range of cellular proteins. PKC also serves as the receptor for phorbol esters, a class of tumor promoters.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00130::C1_1 97.74::42-63 GO:0030168::platelet activation confident hh_3pfq_A_1::22-63 very confident psy8311 254 no hit no match no hit no match PF00130::C1_1 99.42::64-115 GO:0030168::platelet activation confident hh_3pfq_A_1::32-42,46-122,193-250 very confident psy10239 100 Q9XTG1::Neuroligin-1 ::Probable neuronal cell surface protein thought to be involved in cell-cell-interactions by forming intercellular junctions through binding to beta-neurexins.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00135::COesterase 97.37::22-98 GO:0006911::phagocytosis, engulfment confident hh_1p0i_A_1::22-51,53-89,92-97 confident psy18038 146 Q8CIV3::Lipase member H ::Hydrolyzes specifically phosphatidic acid (PA) to produce lysophosphatidic acid (LPA).::Mus musculus (taxid: 10090) confident no hit no match PF00151::Lipase 100.00::6-144 GO:0005615::extracellular space confident rp_1w52_X_1::55-138 very confident psy13901 157 Q9BDJ4::Lipase member H ::Hydrolyzes specifically phosphatidic acid (PA) to produce lysophosphatidic acid (LPA).::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF00151::Lipase 100.00::1-153 GO:0005615::extracellular space confident hh_1bu8_A_1::1-10,17-23,25-107,111-132,134-137,139-153 very confident psy18040 82 P54318::Pancreatic lipase-related protein 2 ::Lipase with broad substrate specificity. Can hydrolyze both phospholipids and galactolipids. Shows a preference for 1,2-didodecanoylphosphatidylethanolamine and 1,2-didodecanoylphosphatidylglycerol, and has low activity towards 1,2-didodecanoylphosphatidylcholine (in vitro).::Rattus norvegicus (taxid: 10116) portable no hit no match PF00151::Lipase 99.88::6-79 GO:0016298::lipase activity confident hh_1bu8_A_1::3-49,51-81 very confident psy8613 191 P50903::Pancreatic triacylglycerol lipase ::::Cavia porcellus (taxid: 10141) portable no hit no match PF00151::Lipase 100.00::1-155 GO:0043229::intracellular organelle confident hh_1rp1_A_1::1-9,11-36,38-76,80-80,82-98,101-154 very confident psy15372 380 P02722::ADP/ATP translocase 1 ::Catalyzes the exchange of cytoplasmic ADP with mitochondrial ATP across the mitochondrial inner membrane.::Bos taurus (taxid: 9913) very confident no hit no match PF00153::Mito_carr 99.72::206-299 GO:0001508::regulation of action potential very confident hh_1okc_A_1::91-142,146-161,167-378 very confident psy4379 370 O97470::Mitochondrial substrate carrier family protein ancA ::Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane.::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF00153::Mito_carr 99.74::180-273 GO:0005507::copper ion binding confident hh_1okc_A_1::75-85,88-92,95-364 very confident psy10926 227 Q8BH59::Calcium-binding mitochondrial carrier protein Aralar1 ::Catalyzes the calcium-dependent exchange of cytoplasmic glutamate with mitochondrial aspartate across the mitochondrial inner membrane. May have a function in the urea cycle.::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.81::126-218 GO:0005509::calcium ion binding confident hh_2lck_A_2::43-218 very confident psy1819 141 Q9UBX3::Mitochondrial dicarboxylate carrier ::Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.::Homo sapiens (taxid: 9606) portable no hit no match PF00153::Mito_carr 99.59::72-139 GO:0005730::nucleolus confident hh_2lck_A_1::1-12,15-55,58-139 very confident psy3202 219 Q9UBX3::Mitochondrial dicarboxylate carrier ::Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF00153::Mito_carr 99.80::123-211 GO:0005730::nucleolus very confident hh_2lck_A_1::1-15,20-59,62-211 very confident psy10734 169 O60029::Putative mitochondrial carrier protein PET8 ::::Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811) confident no hit no match PF00153::Mito_carr 99.64::1-70 GO:0005739::mitochondrion confident hh_2lck_A_2::1-74,80-152 very confident psy17308 118 Q498U3::Solute carrier family 25 member 40 ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF00153::Mito_carr 99.58::2-69 GO:0005739::mitochondrion confident hh_1okc_A_1::2-70,76-111 confident psy16572 65 Q5XGI1::Kidney mitochondrial carrier protein 1 ::Probable transporter.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00153::Mito_carr 99.64::6-65 GO:0005739::mitochondrion confident hh_2lck_A_2::6-34,39-65 very confident psy6875 201 Q5XH95::Calcium-binding mitochondrial carrier protein SCaMC-2 ::Calcium-dependent mitochondrial solute carrier.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00153::Mito_carr 99.58::135-200 GO:0005739::mitochondrion confident hh_1okc_A_2::45-99,127-201 very confident psy14475 169 Q5ZKP7::Solute carrier family 25 member 36 ::::Gallus gallus (taxid: 9031) portable no hit no match PF00153::Mito_carr 99.83::7-151 GO:0005739::mitochondrion confident hh_2lck_A_2::11-44,53-54,84-85,94-169 very confident psy9496 259 Q9BV35::Calcium-binding mitochondrial carrier protein SCaMC-3 ::Calcium-dependent mitochondrial solute carrier. Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. May act as a ATP-Mg/Pi exchanger that mediates the transport of Mg-ATP in exchange for phosphate, catalyzing the net uptake or efflux of adenine nucleotides into or from the mitochondria.::Homo sapiens (taxid: 9606) confident no hit no match PF00153::Mito_carr 99.72::47-139 GO:0005739::mitochondrion confident hh_1okc_A_1::1-140,163-202,213-248,250-259 very confident psy713 378 Q08DK4::Mitochondrial glutamate carrier 1 ::Involved in the transport of glutamate across the inner mitochondrial membrane. Glutamate is cotransported with H(+).::Bos taurus (taxid: 9913) confident no hit no match PF00153::Mito_carr 99.62::247-370 GO:0005743::mitochondrial inner membrane confident hh_2lck_A_1::4-46,48-89,91-128,165-165,185-241,244-282,287-301,338-370 very confident psy17712 293 Q27257::Protein dif-1 ::Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation.::Caenorhabditis elegans (taxid: 6239) very confident no hit no match PF00153::Mito_carr 99.78::202-292 GO:0005743::mitochondrial inner membrane very confident hh_1okc_A_1::5-191,200-240,242-271,273-289 very confident psy6068 329 Q8BGF9::Solute carrier family 25 member 44 ::::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.77::236-322 GO:0005743::mitochondrial inner membrane confident hh_1okc_A_1::25-154,173-230,234-300,302-318 very confident psy16338 298 Q8BGF9::Solute carrier family 25 member 44 ::::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.73::117-229 GO:0005743::mitochondrial inner membrane confident hh_2lck_A_1::28-153,173-231,233-298 very confident psy1347 245 Q93XM7::Mitochondrial carnitine/acylcarnitine carrier-like protein ::May transport carnitine or acylcarnitine from the cytosol to the mitochondrial matrix as an alternative or a complement to the succinate-producing glyoxylate cycle. Involved in the transition from the embryonic stage to the juvenile autotrophic stage.::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF00153::Mito_carr 99.76::97-183 GO:0005743::mitochondrial inner membrane confident hh_1okc_A_1::45-184,199-235 very confident psy16566 281 Q5XGI1::Kidney mitochondrial carrier protein 1 ::Probable transporter.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00153::Mito_carr 99.67::163-281 GO:0005774::vacuolar membrane confident hh_2lck_A_1::4-194,224-224,231-281 very confident psy16028 340 Q00325::Phosphate carrier protein, mitochondrial ::Transport of phosphate groups from the cytosol to the mitochondrial matrix. Phosphate is cotransported with H(+).::Homo sapiens (taxid: 9606) very confident no hit no match PF00153::Mito_carr 99.70::140-225 GO:0005811::lipid particle very confident hh_2lck_A_2::2-133,138-226 very confident psy8581 414 no hit no match no hit no match PF00153::Mito_carr 99.70::324-405 GO:0005811::lipid particle very confident hh_1okc_A_1::139-230,235-384,386-402 very confident psy5922 323 Q920G8::Mitoferrin-1 ::Mitochondrial iron transporter that specifically mediates iron uptake in developing erythroid cells, thereby playing an essential role in heme biosynthesis. The iron delivered into the mitochondria, presumably as Fe(2+), is then probably delivered to ferrochelatase to catalyze Fe(2+) incorporation into protoprophyrin IX to make heme.::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.78::232-322 GO:0005886::plasma membrane confident hh_1okc_A_1::15-169,201-300,302-318 very confident psy13180 326 P32089::Tricarboxylate transport protein, mitochondrial ::Involved in citrate-H(+)/malate exchange. Important for the bioenergetics of hepatic cells as it provides a carbon source for fatty acid and sterol biosyntheses, and NAD(+) for the glycolytic pathway.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00153::Mito_carr 99.70::126-213 GO:0006843::mitochondrial citrate transport confident hh_1okc_A_1::1-30,63-214,248-267,269-321 very confident psy14479 125 Q5ZKP7::Solute carrier family 25 member 36 ::::Gallus gallus (taxid: 9031) confident no hit no match PF00153::Mito_carr 99.85::1-83 GO:0006862::nucleotide transport confident hh_2lck_A_2::1-84,94-123 confident psy17751 419 Q8VEM8::Phosphate carrier protein, mitochondrial ::Transport of phosphate groups from the cytosol to mitochondrial matrix. Phosphate is cotransported with H(+).::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.62::220-307 GO:0007275::multicellular organismal development confident hh_2lck_A_2::2-26,28-82,94-127,207-213,218-306 very confident psy14349 91 Q6QRN9::ADP/ATP translocase 3 ::Catalyzes the exchange of cytoplasmic ADP with mitochondrial ATP across the mitochondrial inner membrane. May participate in the formation of the permeability transition pore complex (PTPC) responsible for the release of mitochondrial products that triggers apoptosis.::Sus scrofa (taxid: 9823) confident no hit no match PF00153::Mito_carr 99.92::5-91 GO:0009941::chloroplast envelope confident hh_1okc_A_1::2-91 very confident psy3923 73 Q8SQH5::ADP/ATP translocase 2 ::Catalyzes the exchange of cytoplasmic ADP with mitochondrial ATP across the mitochondrial inner membrane. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation.::Bos taurus (taxid: 9913) confident no hit no match PF00153::Mito_carr 98.71::22-53 GO:0009941::chloroplast envelope very confident rp_1okc_A_1::20-68 very confident psy1152 186 Q5XIF9::Solute carrier family 25 member 34 ::::Rattus norvegicus (taxid: 10116) portable no hit no match PF00153::Mito_carr 99.86::83-178 GO:0015116::sulfate transmembrane transporter activity confident hh_2lck_A_1::1-13,18-77,81-117,124-176 very confident psy3203 110 Q9UBX3::Mitochondrial dicarboxylate carrier ::Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF00153::Mito_carr 99.89::14-102 GO:0015116::sulfate transmembrane transporter activity confident hh_2lck_A_1::3-101 very confident psy14763 136 Q9UBX3::Mitochondrial dicarboxylate carrier ::Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF00153::Mito_carr 99.87::40-128 GO:0015116::sulfate transmembrane transporter activity confident hh_2lck_A_1::3-128 very confident psy4907 308 Q76P23::Mitochondrial substrate carrier family protein Q ::May have transport activity.::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF00153::Mito_carr 99.72::183-268 GO:0015217::ADP transmembrane transporter activity confident hh_1okc_A_1::9-265 very confident psy5352 305 Q0P483::Mitochondrial coenzyme A transporter SLC25A42 ::::Danio rerio (taxid: 7955) confident no hit no match PF00153::Mito_carr 99.75::2-90 GO:0022857::transmembrane transporter activity confident hh_1okc_A_1::2-96,132-172,180-202,204-256,258-270,272-288 very confident psy1297 427 Q27257::Protein dif-1 ::Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00153::Mito_carr 99.75::145-237 GO:0022857::transmembrane transporter activity confident hh_2lck_A_1::5-40,44-45,54-64,92-140,143-240,251-290,292-313 very confident psy12608 65 Q70HW3::S-adenosylmethionine mitochondrial carrier protein ::Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Specifically mediates the transport of S-adenosylmethionine (SAM) into the mitochondria.::Homo sapiens (taxid: 9606) confident no hit no match PF00153::Mito_carr 99.77::2-65 GO:0022857::transmembrane transporter activity confident hh_2lck_A_2::2-65 very confident psy7875 279 Q29RM1::Mitochondrial thiamine pyrophosphate carrier ::Mitochondrial transporter mediating uptake of thiamine pyrophosphate (ThPP) into mitochondria.::Bos taurus (taxid: 9913) confident no hit no match PF00153::Mito_carr 99.51::179-262 GO:0030974::thiamine pyrophosphate transport confident hh_2lck_A_1::1-10,15-85,88-160,177-214,219-267 very confident psy3836 217 Q8BMG8::Mitochondrial folate transporter/carrier ::Transports folate across the inner membranes of mitochondria.::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.78::111-206 GO:0031969::chloroplast membrane confident hh_1okc_A_1::11-148,151-206 very confident psy14477 112 Q5ZKP7::Solute carrier family 25 member 36 ::::Gallus gallus (taxid: 9031) confident no hit no match PF00153::Mito_carr 99.81::12-99 GO:0032355::response to estradiol stimulus confident hh_2lck_A_2::15-32,35-100 very confident psy16296 70 Q5XGI1::Kidney mitochondrial carrier protein 1 ::Probable transporter.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00153::Mito_carr 99.08::37-69 GO:0034658::isopropylmalate transmembrane transporter activity confident hh_2lck_A_1::8-18,21-69 very confident psy13024 75 P22292::Mitochondrial 2-oxoglutarate/malate carrier protein ::Catalyzes the transport of 2-oxoglutarate across the inner mitochondrial membrane in an electroneutral exchange for malate or other dicarboxylic acids, and plays an important role in several metabolic processes, including the malate-aspartate shuttle, the oxoglutarate/isocitrate shuttle, in gluconeogenesis from lactate, and in nitrogen metabolism.::Bos taurus (taxid: 9913) confident no hit no match PF00153::Mito_carr 99.88::2-75 GO:0042221::response to chemical stimulus confident hh_2lck_A_1::2-74 very confident psy15345 330 O97470::Mitochondrial substrate carrier family protein ancA ::Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane.::Dictyostelium discoideum (taxid: 44689) very confident no hit no match PF00153::Mito_carr 99.75::240-330 GO:0042645::mitochondrial nucleoid very confident hh_1okc_A_1::12-214,239-330 very confident psy2128 89 Q8SQH5::ADP/ATP translocase 2 ::Catalyzes the exchange of cytoplasmic ADP with mitochondrial ATP across the mitochondrial inner membrane. As part of the mitotic spindle-associated MMXD complex it may play a role in chromosome segregation.::Bos taurus (taxid: 9913) confident no hit no match PF00153::Mito_carr 99.75::14-88 GO:0042645::mitochondrial nucleoid confident rp_1okc_A_1::13-61 very confident psy14348 225 P32007::ADP/ATP translocase 3 ::Catalyzes the exchange of cytoplasmic ADP with mitochondrial ATP across the mitochondrial inner membrane. May participate in the formation of the permeability transition pore complex (PTPC) responsible for the release of mitochondrial products that triggers apoptosis.::Bos taurus (taxid: 9913) very confident no hit no match PF00153::Mito_carr 99.77::59-150 GO:0044281::small molecule metabolic process very confident hh_1okc_A_1::2-224 very confident psy18226 499 Q3SZI5::Mitochondrial uncoupling protein 2 ::UCP are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation from ATP synthesis. As a result, energy is dissipated in the form of heat.::Bos taurus (taxid: 9913) confident no hit no match PF00153::Mito_carr 99.74::403-491 GO:0044281::small molecule metabolic process confident hh_2lck_A_2::26-61,80-139,144-280,344-396 very confident psy17655 68 Q9Y619::Mitochondrial ornithine transporter 1 ::Ornithine transport across inner mitochondrial membrane, from the cytoplasm to the matrix.::Homo sapiens (taxid: 9606) confident no hit no match PF00153::Mito_carr 99.75::3-67 GO:0044281::small molecule metabolic process confident hh_2lck_A_2::1-50,52-67 very confident psy1296 283 Q27257::Protein dif-1 ::Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00153::Mito_carr 99.76::140-232 GO:0044710::single-organism metabolic process confident hh_1okc_A_2::5-41,79-135,139-211,213-229 very confident psy1157 148 Q5SWT3::Solute carrier family 25 member 35 ::::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.85::2-89 GO:0044763::single-organism cellular process confident hh_2lck_A_1::2-33,38-89,92-144 very confident psy10185 196 Q6CNY8::Solute carrier family 25 member 38 homolog ::Mitochondrial carrier required for the biosynthesis of heme, possibly by facilitating 5-aminolevulinate (ALA) production. May act by importing glycine into mitochondria or by exchanging glycine for ALA across the mitochondrial inner membrane.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) confident no hit no match PF00153::Mito_carr 99.80::23-114 GO:0044763::single-organism cellular process confident hh_1okc_A_1::23-196 very confident psy3227 561 O95847::Mitochondrial uncoupling protein 4 ::UCP are mitochondrial transporter proteins that create proton leaks across the inner mitochondrial membrane, thus uncoupling oxidative phosphorylation from ATP synthesis. As a result, energy is dissipated in the form of heat. May play a role in thermoregulatory heat production and metabolism in brain.::Homo sapiens (taxid: 9606) confident no hit no match PF00153::Mito_carr 99.76::464-558 GO:0045177::apical part of cell confident hh_2lck_A_1::263-298,300-360,362-399,403-500,507-558 very confident psy4813 302 Q08DK4::Mitochondrial glutamate carrier 1 ::Involved in the transport of glutamate across the inner mitochondrial membrane. Glutamate is cotransported with H(+).::Bos taurus (taxid: 9913) confident no hit no match PF00153::Mito_carr 99.77::201-296 GO:0051181::cofactor transport confident hh_1okc_A_1::3-195,200-273,275-283,286-292 very confident psy15385 295 Q9UBX3::Mitochondrial dicarboxylate carrier ::Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.::Homo sapiens (taxid: 9606) very confident no hit no match PF00153::Mito_carr 99.76::203-291 GO:0071423::malate transmembrane transport very confident hh_2lck_A_1::13-98,101-139,142-291 very confident psy17653 379 Q93XM7::Mitochondrial carnitine/acylcarnitine carrier-like protein ::May transport carnitine or acylcarnitine from the cytosol to the mitochondrial matrix as an alternative or a complement to the succinate-producing glyoxylate cycle. Involved in the transition from the embryonic stage to the juvenile autotrophic stage.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF00153::Mito_carr 99.73::289-376 GO:0071702::organic substance transport confident hh_1okc_A_1::11-64,66-147,226-282,287-356,358-374 very confident psy10316 254 Q17QI7::Solute carrier family 25 member 39 ::Required for normal heme biosynthesis.::Bos taurus (taxid: 9913) portable no hit no match PF00153::Mito_carr 99.73::56-225 GO:0071705::nitrogen compound transport confident hh_2lck_A_1::2-50,54-92,98-134,137-173,175-224 very confident psy13131 148 Q27257::Protein dif-1 ::Seems to play a role in the maintenance of tissue differentiation in the developing embryo, but not for its initiation.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00153::Mito_carr 99.56::84-148 GO:0071705::nitrogen compound transport confident hh_1okc_A_1::7-80,83-148 very confident psy7900 293 Q5HZI9::Solute carrier family 25 member 51 ::::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.75::95-184 GO:0071705::nitrogen compound transport confident hh_2lck_A_2::6-129,131-185 very confident psy11211 316 Q920G8::Mitoferrin-1 ::Mitochondrial iron transporter that specifically mediates iron uptake in developing erythroid cells, thereby playing an essential role in heme biosynthesis. The iron delivered into the mitochondria, presumably as Fe(2+), is then probably delivered to ferrochelatase to catalyze Fe(2+) incorporation into protoprophyrin IX to make heme.::Mus musculus (taxid: 10090) confident no hit no match PF00153::Mito_carr 99.73::66-153 GO:0071705::nitrogen compound transport confident hh_2lck_A_1::9-184,197-200,223-276 very confident psy13912 76 Q3T0M3::U3 small nucleolar ribonucleoprotein protein IMP3 ::Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing.::Bos taurus (taxid: 9913) confident no hit no match PF00163::Ribosomal_S4 93.86::5-52 GO:0003723::RNA binding confident hh_3u5c_J_1::18-60 confident psy407 160 B6RSP1::Pleckstrin homology domain-containing family A member 7 ::Required for zonula adherens biogenesis and maintenance.::Danio rerio (taxid: 7955) confident no hit no match PF00169::PH 99.82::3-104 GO:0005737::cytoplasm confident hh_2dkp_A_1::3-12,14-33,39-108 very confident psy4640 109 B6RSP1::Pleckstrin homology domain-containing family A member 7 ::Required for zonula adherens biogenesis and maintenance.::Danio rerio (taxid: 7955) confident no hit no match PF00169::PH 99.69::22-101 GO:0005737::cytoplasm confident hh_2dkp_A_1::22-105 very confident psy17477 108 P08630::Tyrosine-protein kinase Btk29A ::Required for proper ring canal development. Also required for the development of male genitalia and for adult survival.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00169::PH 98.78::42-95 GO:0005737::cytoplasm confident hh_2lul_A_1::36-60,63-96 very confident psy17820 210 Q15438::Cytohesin-1 ::Promotes guanine-nucleotide exchange on ARF1 and ARF5. Promotes the activation of ARF through replacement of GDP with GTP.::Homo sapiens (taxid: 9606) confident no hit no match PF00169::PH 99.76::100-209 GO:0005737::cytoplasm confident hh_1fgy_A_1::96-209 very confident psy2209 156 Q6ZV73::FYVE, RhoGEF and PH domain-containing protein 6 ::May activate CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. May play a role in regulating the actin cytoskeleton and cell shape.::Homo sapiens (taxid: 9606) portable no hit no match PF00169::PH 99.80::62-153 GO:0005737::cytoplasm confident hh_1wgq_A_1::58-155 very confident psy1045 113 O14492::SH2B adapter protein 2 ::Adapter protein for several members of the tyrosine kinase receptor family. Involved in multiple signaling pathways. May be involved in coupling from immunoreceptor to Ras signaling. Acts as a negative regulator of cytokine signaling in collaboration with CBL. Binds to EPOR and suppresses EPO-induced STAT5 activation, possibly through a masking effect on STAT5 docking sites in EPOR. Suppresses PDGF-induced mitogenesis. May induce cytoskeletal reorganization via interaction with VAV3.::Homo sapiens (taxid: 9606) portable no hit no match PF00169::PH 96.71::34-112 GO:0005886::plasma membrane confident hh_1v5m_A_1::20-113 very confident psy12865 227 O60229::Kalirin ::Promotes the exchange of GDP by GTP. Activates specific Rho GTPase family members, thereby inducing various signaling mechanisms that regulate neuronal shape, growth, and plasticity, through their effects on the actin cytoskeleton. Induces lamellipodia independent of its GEF activity.::Homo sapiens (taxid: 9606) confident no hit no match PF00169::PH 95.80::5-58 GO:0005886::plasma membrane confident hh_2rgn_B_1::1-70,72-83,85-88 confident psy7933 171 Q7PHR1::Kinesin-like protein unc-104 ::Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.::Anopheles gambiae (taxid: 7165) confident no hit no match PF00169::PH 99.87::46-142 GO:0007528::neuromuscular junction development confident hh_2dkp_A_1::43-103,105-143 very confident psy17028 334 Q9VS24::Protein melted ::Participates in fat metabolism regulation by recruiting FOXO and the TSC1-TSC2 complex to the cell membrane, which positively regulates TOR activity and negatively regulates the expression of FOXO target genes. Involved in R8 photoreceptor subtype specification. During early embryonic development, may be required for ectodermal patterning.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00169::PH 99.73::218-314 GO:0010314::phosphatidylinositol-5-phosphate binding confident hh_1fao_A_1::215-225,227-231,234-276,278-318 very confident psy17150 146 Q8K1N2::Pleckstrin homology-like domain family B member 2 ::Seems to be involved in the assembly of the postsynaptic apparatus. May play a role in acetyl-choline receptor (AChR) aggregation in the postsynaptic membrane.::Mus musculus (taxid: 10090) confident no hit no match PF00169::PH 99.83::39-138 GO:0045111::intermediate filament cytoskeleton confident hh_3tfm_A_1::35-62,65-95,103-139 very confident psy8929 160 Q27421::Protein outspread ::::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00169::PH 99.70::56-143 GO:0051015::actin filament binding confident hh_1upq_A_1::58-85,89-98,100-147 very confident psy1989 82 P27925::Cyclic AMP-responsive element-binding protein 1 ::Phosphorylation-dependent transcription factor that stimulates transcription upon binding to the DNA cAMP response element (CRE), a sequence present in many viral and cellular promoters. Transcription activation is enhanced by the TORC coactivators which act independently of Ser-117 phosphorylation. Involved in different cellular processes including the synchronization of circadian rhythmicity and the differentiation of adipose cells.::Bos taurus (taxid: 9913) confident no hit no match PF00170::bZIP_1 99.61::21-82 GO:0035497::cAMP response element binding confident hh_1dh3_A_1::25-78 very confident psy15440 79 Q5XIU9::Membrane-associated progesterone receptor component 2 ::Receptor for steroids.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00173::Cyt-b5 96.68::2-55 GO:0035100::ecdysone binding confident hh_1j03_A_1::2-20,22-56 very confident psy6350 189 P20105::Ecdysone-induced protein 74EF isoform A ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00178::Ets 100.00::82-165 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident hh_2nny_A_1::79-95,97-107,109-180 very confident psy8490 228 P41156::Protein C-ets-1 ::Transcription factor.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00178::Ets 99.95::131-194 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident rp_1gvj_A_1::105-192,196-208 very confident psy15927 98 P36110::Protein PRY2 ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF00188::CAP 99.23::18-78 GO:0005576::extracellular region confident hh_4aiw_A_1::12-29,31-34,36-36,42-97 very confident psy17200 177 Q9ET66::Peptidase inhibitor 16 ::Putative serine protease inhibitor.::Mus musculus (taxid: 10090) portable no hit no match PF00188::CAP 99.03::7-97 GO:0043231::intracellular membrane-bounded organelle confident hh_2vzn_A_1::1-20,24-24,26-45,47-54,56-111 very confident psy6503 60 P47032::Protein PRY1 ::::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident no hit no match PF00188::CAP 98.91::3-36 GO:0050896::response to stimulus confident hh_1cfe_A_1::3-48 very confident psy3631 184 P22464::Annexin-B9 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00191::Annexin 99.78::38-135 GO:0005488::binding confident hh_1w3w_A_2::26-82,115-182 very confident psy2493 62 P33477::Annexin A11 ::Required for midbody formation and completion of the terminal phase of cytokinesis (By similarity). Binds specifically to calcyclin in a calcium-dependent manner.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match PF00191::Annexin 99.73::11-62 GO:0005509::calcium ion binding confident hh_1w3w_A_1::1-62 very confident psy3630 172 P55260::Annexin A4 ::Calcium/phospholipid-binding protein which promotes membrane fusion and is involved in exocytosis.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00191::Annexin 99.81::14-79 GO:0005544::calcium-dependent phospholipid binding confident hh_1hm6_A_2::12-79,97-170 very confident psy18132 64 P55260::Annexin A4 ::Calcium/phospholipid-binding protein which promotes membrane fusion and is involved in exocytosis.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00191::Annexin 99.81::13-64 GO:0005544::calcium-dependent phospholipid binding confident hh_1w3w_A_1::1-64 very confident psy12818 532 P22465::Annexin-B10 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00191::Annexin 99.65::229-294 GO:0031090::organelle membrane confident hh_1m9i_A_1::22-107,109-110,115-121,129-132,136-223,225-375,377-526 very confident psy4859 102 Q07076::Annexin A7 ::Calcium/phospholipid-binding protein which promotes membrane fusion and is involved in exocytosis.::Mus musculus (taxid: 10090) portable no hit no match PF00191::Annexin 99.89::16-100 GO:0031090::organelle membrane confident hh_1m9i_A_1::13-102 very confident psy18129 470 Q3SWX7::Annexin A3 ::Inhibitor of phospholipase A2, also possesses anti-coagulant properties. Also cleaves the cyclic bond of inositol 1,2-cyclic phosphate to form inositol 1-phosphate.::Bos taurus (taxid: 9913) confident no hit no match PF00191::Annexin 99.66::100-165 GO:0031090::organelle membrane confident hh_1axn_A_1::96-169,221-267,282-307,315-470 very confident psy2495 391 P22464::Annexin-B9 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00191::Annexin 99.67::38-103 GO:0061467::basolateral protein localization confident hh_1axn_A_1::24-267,271-276,308-371 very confident psy4804 332 P22464::Annexin-B9 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00191::Annexin 99.74::53-118 GO:0061467::basolateral protein localization very confident hh_1dm5_A_1::39-331 very confident psy16731 282 Q99JG3::Annexin A13 ::::Mus musculus (taxid: 10090) portable no hit no match PF00191::Annexin 99.64::203-269 GO:0071944::cell periphery confident hh_1m9i_A_1::2-36,42-81,84-111,160-169,172-282 very confident psy17304 119 Q9JLN6::Disintegrin and metalloproteinase domain-containing protein 28 ::May play a role in organogenesis and organ-specific functions such as thymic T-cell development.::Mus musculus (taxid: 10090) confident no hit no match PF00200::Disintegrin 99.96::12-89 GO:0042221::response to chemical stimulus confident hh_2ao7_A_1::2-26,29-66,68-110,113-115,117-119 very confident psy388 94 Q6ZQM8::UDP-glucuronosyltransferase 1-7C ::UDPGT is of major importance in the conjugation and subsequent elimination of potentially toxic xenobiotics and endogenous compounds. This isoform has specificity for phenols.::Mus musculus (taxid: 10090) portable no hit no match PF00201::UDPGT 99.91::1-81 GO:0052696::flavonoid glucuronidation confident hh_1iir_A_1::11-36 portable psy9766 97 Q8AWW5::Cysteine-rich motor neuron 1 protein ::May play a role in CNS development by interacting with growth factors implicated in motor neuron differentiation and survival.::Gallus gallus (taxid: 9031) portable no hit no match PF00219::IGFBP 99.49::23-78 GO:0050896::response to stimulus confident hh_3tjq_A_1::16-33,35-39,42-66,70-94 very confident psy8843 76 Q61771::Kinesin-like protein KIF3B ::Involved in tethering the chromosomes to the spindle pole and in chromosome movement. Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro.::Mus musculus (taxid: 10090) confident no hit no match PF00225::Kinesin 91.61::32-75 GO:0000226::microtubule cytoskeleton organization confident hh_3b6u_A_1::19-76 very confident psy3080 118 O75165::DnaJ homolog subfamily C member 13 ::::Homo sapiens (taxid: 9606) confident no hit no match PF00226::DnaJ 96.81::95-117 GO:0055037::recycling endosome confident hh_1n4c_A_1::94-106,109-117 portable psy13496 249 Q13946::High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A ::Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. May have a role in muscle signal transduction.::Homo sapiens (taxid: 9606) confident no hit no match PF00233::PDEase_I 100.00::14-199 GO:0005829::cytosol confident hh_1zkl_A_1::14-210 very confident psy7867 484 Q01063::cAMP-specific 3',5'-cyclic phosphodiesterase 4D ::Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes.::Mus musculus (taxid: 10090) confident no hit no match PF00233::PDEase_I 100.00::123-411 GO:0070887::cellular response to chemical stimulus confident hh_1f0j_A_1::90-216,261-400,435-462 very confident psy4694 74 Q6QEJ7::Profilin ::Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG.::Apis mellifera (taxid: 7460) very confident no hit no match PF00235::Profilin 99.91::2-71 GO:0005829::cytosol confident hh_1acf_A_1::2-71 very confident psy4809 89 Q6QEJ7::Profilin ::Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations. By binding to PIP2, it inhibits the formation of IP3 and DG.::Apis mellifera (taxid: 7460) very confident no hit no match PF00235::Profilin 99.97::1-84 GO:0005829::cytosol confident hh_3d9y_A_1::1-89 very confident psy9488 114 P62869::Transcription elongation factor B polypeptide 2 ::The elongin BC complex seems to be involved as an adapter protein in the proteasomal degradation of target proteins via different E3 ubiquitin ligase complexes, including the von Hippel-Lindau ubiquitination complex CBC(VHL). By binding to BC-box motifs it seems to link target recruitment subunits, like VHL and members of the SOCS box family, to Cullin/RBX1 modules that activate E2 ubiquitination enzymes.::Mus musculus (taxid: 10090) confident no hit no match PF00240::ubiquitin 98.63::14-76 GO:0001076::RNA polymerase II transcription factor binding transcription factor activity confident hh_2fnj_B_1::6-40,42-76,78-113 very confident psy12731 107 Q9N5Y2::Probable very-long-chain enoyl-CoA reductase art-1 ::Reduces trans-2,3-acyl-CoA to acyl-CoA of long and very long chain fatty acids.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00240::ubiquitin 99.51::1-58 GO:0005783::endoplasmic reticulum confident hh_2dzj_A_1::2-61 very confident psy10057 99 Q8K4Z5::Splicing factor 3A subunit 1 ::Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex.::Mus musculus (taxid: 10090) confident no hit no match PF00240::ubiquitin 98.84::58-97 GO:0044428::nuclear part confident hh_1we7_A_1::17-39,41-97 very confident psy12965 139 P60984::Glia maturation factor beta ::This protein causes differentiation of brain cells, stimulation of neural regeneration, and inhibition of proliferation of tumor cells.::Bos taurus (taxid: 9913) confident no hit no match PF00241::Cofilin_ADF 100.00::11-138 GO:0004860::protein kinase inhibitor activity confident hh_1vkk_A_1::2-139 very confident psy13973 230 P45594::Cofilin/actin-depolymerizing factor homolog ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00241::Cofilin_ADF 99.93::17-154 GO:0005875::microtubule associated complex confident hh_1f7s_A_1::9-66,70-85,91-118,125-136,142-154 very confident psy14919 339 Q9VFM9::Twinfilin ::Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00241::Cofilin_ADF 99.96::178-306 GO:0030042::actin filament depolymerization very confident hh_2vac_A_1::1-71,73-129 very confident psy158 116 Q9VFM9::Twinfilin ::Actin-binding protein involved in motile and morphological processes. Inhibits actin polymerization, likely by sequestering G-actin.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00241::Cofilin_ADF 99.63::1-77 GO:0044464::cell part confident hh_2d8b_A_1::1-44,61-82 very confident psy17893 143 Q9CQI6::Coactosin-like protein ::Binds to F-actin in a calcium-independent manner. Has no direct effect on actin depolymerization.::Mus musculus (taxid: 10090) confident no hit no match PF00241::Cofilin_ADF 99.90::38-139 GO:0045335::phagocytic vesicle confident hh_1t3y_A_1::33-140 very confident psy3621 136 Q9CQI6::Coactosin-like protein ::Binds to F-actin in a calcium-independent manner. Has no direct effect on actin depolymerization.::Mus musculus (taxid: 10090) confident no hit no match PF00241::Cofilin_ADF 99.92::10-134 GO:0045335::phagocytic vesicle confident no hit no match psy13251 166 no hit no match no hit no match PF00243::NGF 98.19::69-165 GO:0010941::regulation of cell death confident hh_3e07_A_1::66-68,70-100,105-165 very confident psy15740 114 P00732::Carboxypeptidase B ::::Bos taurus (taxid: 9913) confident no hit no match PF00246::Peptidase_M14 99.45::12-106 GO:0042221::response to chemical stimulus confident hh_1kwm_A_1::12-24,26-69,71-114 very confident psy16172 134 A5A6K7::Carboxypeptidase E ::Removes residual C-terminal Arg or Lys remaining after initial endoprotease cleavage during prohormone processing. Processes proinsulin.::Pan troglodytes (taxid: 9598) portable no hit no match PF00246::Peptidase_M14 99.23::2-103 GO:0051384::response to glucocorticoid stimulus confident hh_3mn8_A_1::1-32,35-38,43-46,49-127 very confident psy17399 152 O75976::Carboxypeptidase D ::::Homo sapiens (taxid: 9606) confident no hit no match PF00246::Peptidase_M14 98.87::2-81 GO:0051384::response to glucocorticoid stimulus confident hh_3mn8_A_1::1-118,120-131 very confident psy13149 89 no hit no match no hit no match PF00261::Tropomyosin 98.89::6-82 GO:0031941::filamentous actin confident hh_2b9c_A_2::1-79 confident psy70 88 P35565::Calnexin ::Calcium-binding protein that interacts with newly synthesized glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00262::Calreticulin 100.00::13-88 GO:0005509::calcium ion binding confident hh_1jhn_A_1::13-56,58-88 very confident psy7421 465 Q6Q487::Calnexin homolog ::Interacts with newly synthesized glycoproteins in the endoplasmic reticulum. It may act in assisting protein assembly and/or in the retention within the ER of unassembled protein subunits. It seems to play a major role in the quality control apparatus of the ER by the retention of incorrectly folded proteins.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) confident no hit no match PF00262::Calreticulin 100.00::219-465 GO:0032502::developmental process confident hh_1jhn_A_1::220-292,294-386,389-465 very confident psy8411 385 P29413::Calreticulin ::Molecular calcium-binding chaperone promoting folding, oligomeric assembly and quality control in the ER via the calreticulin/calnexin cycle. This lectin may interact transiently with almost all of the monoglucosylated glycoproteins that are synthesized in the ER.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00262::Calreticulin 100.00::3-312 GO:0040020::regulation of meiosis very confident hh_3rg0_A_1::3-22,24-218,249-348 very confident psy12681 168 P33879::Sodium/potassium-transporting ATPase subunit beta-3 ::This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The exact function of the beta-3 subunit is not known.::Gallus gallus (taxid: 9031) portable no hit no match PF00287::Na_K-ATPase 100.00::1-134 GO:0008324::cation transmembrane transporter activity confident hh_3kdp_B_1::1-20,23-35,41-135,138-150 very confident psy7835 205 Q24048::Sodium/potassium-transporting ATPase subunit beta-2 ::This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00287::Na_K-ATPase 100.00::25-198 GO:0008324::cation transmembrane transporter activity confident hh_3ixz_B_1::29-90,92-94,98-202 very confident psy17605 551 Q24048::Sodium/potassium-transporting ATPase subunit beta-2 ::This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00287::Na_K-ATPase 100.00::194-547 GO:0008324::cation transmembrane transporter activity confident hh_3ixz_B_1::195-209,211-258,263-274,277-312,318-328,337-340,383-434,464-551 very confident psy9809 237 Q24048::Sodium/potassium-transporting ATPase subunit beta-2 ::This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00287::Na_K-ATPase 100.00::1-233 GO:0008324::cation transmembrane transporter activity confident hh_2zxe_B_1::1-16,18-19,22-22,24-34,39-119,121-127,131-136,146-220,222-237 very confident psy12689 72 Q24048::Sodium/potassium-transporting ATPase subunit beta-2 ::This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00287::Na_K-ATPase 99.97::1-68 GO:0008324::cation transmembrane transporter activity confident hh_3ixz_B_1::2-72 very confident psy17509 171 Q93235::Sodium/potassium-transporting ATPase subunit beta-1 ::Non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. The beta subunit regulates, through assembly of alpha/beta heterodimers, the number of sodium pumps transported to the plasma membrane (By similarity). May also may function in the peptidic vesicle transport pathway from the endoplasmic reticulum for the defecation behaviors.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00287::Na_K-ATPase 100.00::2-166 GO:0008324::cation transmembrane transporter activity confident hh_3ixz_B_1::2-41,43-44,48-60,62-89,99-107,110-132,134-168 very confident psy16493 151 P26367::Paired box protein Pax-6 ::Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells (By similarity). Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters. Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains (By similarity). Isoform 5a appears to function as a molecular switch that specifies target genes.::Homo sapiens (taxid: 9606) confident no hit no match PF00292::PAX 100.00::25-141 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity confident hh_1k78_A_1::22-65,67-146 very confident psy2180 129 P63016::Paired box protein Pax-6 ::Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. Required for the differentiation of pancreatic islet alpha cells. Competes with PAX4 in binding to a common element in the glucagon, insulin and somatostatin promoters (By similarity). Regulates specification of the ventral neuron subtypes by establishing the correct progenitor domains.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00292::PAX 100.00::14-110 GO:0003705::RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity very confident rp_2k27_A_1::13-84 very confident psy10746 59 Q02650::Paired box protein Pax-5 ::May play an important role in B-cell differentiation as well as neural development and spermatogenesis. Involved in the regulation of the CD19 gene, a B-lymphoid-specific target gene.::Mus musculus (taxid: 10090) confident no hit no match PF00292::PAX 99.80::16-53 GO:0007501::mesodermal cell fate specification very confident rp_2k27_A_1::16-48 very confident psy2138 208 Q13330::Metastasis-associated protein MTA1 ::May be involved in the regulation of gene expression by covalent modification of histone proteins. Isoform Long is a corepressor of estrogen receptor (ER). Isoform Short binds to ER and sequesters it in the cytoplasm and enhances non-genomic responses of ER.::Homo sapiens (taxid: 9606) portable no hit no match PF00320::GATA 98.53::40-73 GO:0000118::histone deacetylase complex confident hh_3dfx_A_1::35-53,55-73,75-81 portable psy5658 196 P11117::Lysosomal acid phosphatase ::::Homo sapiens (taxid: 9606) portable no hit no match PF00328::His_Phos_2 99.95::1-195 GO:0005622::intracellular confident hh_3it3_A_1::1-57,60-73,75-78,80-82,84-195 very confident psy8209 269 Q86UF1::Tetraspanin-33 ::Plays an important role in normal erythropoiesis. It has a role in the differentiation of erythroid progenitors.::Homo sapiens (taxid: 9606) confident no hit no match PF00335::Tetraspannin 99.96::16-267 GO:0007298::border follicle cell migration confident hh_1g8q_A_1::117-129,131-162,165-172,186-195,205-207,230-249 confident psy10647 92 no hit no match no hit no match PF00339::Arrestin_N 98.06::8-42 GO:0010629::negative regulation of gene expression confident hh_2fau_A_1::17-35 portable psy7987 112 P49407::Beta-arrestin-1 ::Functions in regulating agonist-mediated G-protein coupled receptor (GPCR) signaling by mediating both receptor desensitization and resensitization processes. During homologous desensitization, beta-arrestins bind to the GPRK-phosphorylated receptor and sterically preclude its coupling to the cognate G-protein; the binding appears to require additional receptor determinants exposed only in the active receptor conformation. The beta-arrestins target many receptors for internalization by acting as endocytic adapters (CLASPs, clathrin-associated sorting proteins) and recruiting the GPRCs to the adapter protein 2 complex 2 (AP-2) in clathrin-coated pits (CCPs). However, the extent of beta-arrestin involvement appears to vary significantly depending on the receptor, agonist and cell type. Internalized arrestin-receptor complexes traffic to intracellular endosomes, where they remain uncoupled from G-proteins. Two different modes of arrestin-mediated internalization occur. Class A receptors, like ADRB2, OPRM1, ENDRA, D1AR and ADRA1B dissociate from beta-arrestin at or near the plasma membrane and undergo rapid recycling. Class B receptors, like AVPR2, AGTR1, NTSR1, TRHR and TACR1 internalize as a complex with arrestin and traffic with it to endosomal vesicles, presumably as desensitized receptors, for extended periods of time. Receptor resensitization then requires that receptor-bound arrestin is removed so that the receptor can be dephosphorylated and returned to the plasma membrane. Involved in internalization of P2RY4 and UTP-stimulated internalization of P2RY2. Involved in phopshorylation-dependent internalization of OPRD1 ands subsequent recycling. Involved in the degradation of cAMP by recruiting cAMP phosphodiesterases to ligand-activated receptors. Beta-arrestins function as multivalent adapter proteins that can switch the GPCR from a G-protein signaling mode that transmits short-lived signals from the plasma membrane via small molecule second messengers and ion channels to a beta-arrestin signaling mode that transmits a distinct set of signals that are initiated as the receptor internalizes and transits the intracellular compartment. Acts as signaling scaffold for MAPK pathways such as MAPK1/3 (ERK1/2). ERK1/2 activated by the beta-arrestin scaffold is largely excluded from the nucleus and confined to cytoplasmic locations such as endocytic vesicles, also called beta-arrestin signalosomes. Recruits c-Src/SRC to ADRB2 resulting in ERK activation. GPCRs for which the beta-arrestin-mediated signaling relies on both ARRB1 and ARRB2 (codependent regulation) include ADRB2, F2RL1 and PTH1R. For some GPCRs the beta-arrestin-mediated signaling relies on either ARRB1 or ARRB2 and is inhibited by the other respective beta-arrestin form (reciprocal regulation). Inhibits ERK1/2 signaling in AGTR1- and AVPR2-mediated activation (reciprocal regulation). Is required for SP-stimulated endocytosis of NK1R and recruits c-Src/SRC to internalized NK1R resulting in ERK1/2 activation, which is required for the antiapoptotic effects of SP. Is involved in proteinase-activated F2RL1-mediated ERK activity. Acts as signaling scaffold for the AKT1 pathway. Is involved in alpha-thrombin-stimulated AKT1 signaling. Is involved in IGF1-stimulated AKT1 signaling leading to increased protection from apoptosis. Involved in activation of the p38 MAPK signaling pathway and in actin bundle formation. Involved in F2RL1-mediated cytoskeletal rearrangement and chemotaxis. Involved in AGTR1-mediated stress fiber formation by acting together with GNAQ to activate RHOA. Appears to function as signaling scaffold involved in regulation of MIP-1-beta-stimulated CCR5-dependent chemotaxis. Involved in attenuation of NF-kappa-B-dependent transcription in response to GPCR or cytokine stimulation by interacting with and stabilizing CHUK. May serve as nuclear messenger for GPCRs. Involved in OPRD1-stimulated transcriptional regulation by translocating to CDKN1B and FOS promoter regions and recruiting EP300 resulting in acetylation of histone H4. Involved in regulation of LEF1 transcriptional activity via interaction with DVL1 and/or DVL2 Also involved in regulation of receptors other than GPCRs. Involved in Toll-like receptor and IL-1 receptor signaling through the interaction with TRAF6 which prevents TRAF6 autoubiquitination and oligomerization required for activation of NF-kappa-B and JUN. Binds phosphoinositides. Binds inositolhexakisphosphate (InsP6) (By similarity). Involved in IL8-mediated granule release in neutrophils.::Homo sapiens (taxid: 9606) confident no hit no match PF00339::Arrestin_N 95.91::9-96 GO:0031410::cytoplasmic vesicle confident hh_1suj_A_1::1-63,65-65,69-96 very confident psy17223 323 P49407::Beta-arrestin-1 ::Functions in regulating agonist-mediated G-protein coupled receptor (GPCR) signaling by mediating both receptor desensitization and resensitization processes. During homologous desensitization, beta-arrestins bind to the GPRK-phosphorylated receptor and sterically preclude its coupling to the cognate G-protein; the binding appears to require additional receptor determinants exposed only in the active receptor conformation. The beta-arrestins target many receptors for internalization by acting as endocytic adapters (CLASPs, clathrin-associated sorting proteins) and recruiting the GPRCs to the adapter protein 2 complex 2 (AP-2) in clathrin-coated pits (CCPs). However, the extent of beta-arrestin involvement appears to vary significantly depending on the receptor, agonist and cell type. Internalized arrestin-receptor complexes traffic to intracellular endosomes, where they remain uncoupled from G-proteins. Two different modes of arrestin-mediated internalization occur. Class A receptors, like ADRB2, OPRM1, ENDRA, D1AR and ADRA1B dissociate from beta-arrestin at or near the plasma membrane and undergo rapid recycling. Class B receptors, like AVPR2, AGTR1, NTSR1, TRHR and TACR1 internalize as a complex with arrestin and traffic with it to endosomal vesicles, presumably as desensitized receptors, for extended periods of time. Receptor resensitization then requires that receptor-bound arrestin is removed so that the receptor can be dephosphorylated and returned to the plasma membrane. Involved in internalization of P2RY4 and UTP-stimulated internalization of P2RY2. Involved in phopshorylation-dependent internalization of OPRD1 ands subsequent recycling. Involved in the degradation of cAMP by recruiting cAMP phosphodiesterases to ligand-activated receptors. Beta-arrestins function as multivalent adapter proteins that can switch the GPCR from a G-protein signaling mode that transmits short-lived signals from the plasma membrane via small molecule second messengers and ion channels to a beta-arrestin signaling mode that transmits a distinct set of signals that are initiated as the receptor internalizes and transits the intracellular compartment. Acts as signaling scaffold for MAPK pathways such as MAPK1/3 (ERK1/2). ERK1/2 activated by the beta-arrestin scaffold is largely excluded from the nucleus and confined to cytoplasmic locations such as endocytic vesicles, also called beta-arrestin signalosomes. Recruits c-Src/SRC to ADRB2 resulting in ERK activation. GPCRs for which the beta-arrestin-mediated signaling relies on both ARRB1 and ARRB2 (codependent regulation) include ADRB2, F2RL1 and PTH1R. For some GPCRs the beta-arrestin-mediated signaling relies on either ARRB1 or ARRB2 and is inhibited by the other respective beta-arrestin form (reciprocal regulation). Inhibits ERK1/2 signaling in AGTR1- and AVPR2-mediated activation (reciprocal regulation). Is required for SP-stimulated endocytosis of NK1R and recruits c-Src/SRC to internalized NK1R resulting in ERK1/2 activation, which is required for the antiapoptotic effects of SP. Is involved in proteinase-activated F2RL1-mediated ERK activity. Acts as signaling scaffold for the AKT1 pathway. Is involved in alpha-thrombin-stimulated AKT1 signaling. Is involved in IGF1-stimulated AKT1 signaling leading to increased protection from apoptosis. Involved in activation of the p38 MAPK signaling pathway and in actin bundle formation. Involved in F2RL1-mediated cytoskeletal rearrangement and chemotaxis. Involved in AGTR1-mediated stress fiber formation by acting together with GNAQ to activate RHOA. Appears to function as signaling scaffold involved in regulation of MIP-1-beta-stimulated CCR5-dependent chemotaxis. Involved in attenuation of NF-kappa-B-dependent transcription in response to GPCR or cytokine stimulation by interacting with and stabilizing CHUK. May serve as nuclear messenger for GPCRs. Involved in OPRD1-stimulated transcriptional regulation by translocating to CDKN1B and FOS promoter regions and recruiting EP300 resulting in acetylation of histone H4. Involved in regulation of LEF1 transcriptional activity via interaction with DVL1 and/or DVL2 Also involved in regulation of receptors other than GPCRs. Involved in Toll-like receptor and IL-1 receptor signaling through the interaction with TRAF6 which prevents TRAF6 autoubiquitination and oligomerization required for activation of NF-kappa-B and JUN. Binds phosphoinositides. Binds inositolhexakisphosphate (InsP6) (By similarity). Involved in IL8-mediated granule release in neutrophils.::Homo sapiens (taxid: 9606) confident no hit no match PF00339::Arrestin_N 98.96::15-64 GO:0031410::cytoplasmic vesicle confident hh_3ugu_A_1::6-148,251-311 very confident psy2090 374 P15372::Phosrestin-2 ::Regulates photoreceptor cell deactivation. Arr1 and Arr2 proteins are mediators of rhodopsin inactivation and are essential for the termination of the phototransduction cascade.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00339::Arrestin_N 99.20::66-217 GO:0044092::negative regulation of molecular function confident hh_1g4m_A_1::55-83,86-283,286-323,325-374 very confident psy3211 84 Q9W1V6::Diphenoloxidase subunit A3 ::This is a copper-containing oxidase that functions in the formation of pigments such as melanins and other polyphenolic compounds. Catalyzes the rate-limiting conversions of tyrosine to DOPA, DOPA to DOPA-quinone and possibly 5,6 dihydroxyindole to indole-5'6 quinone.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00372::Hemocyanin_M 100.00::7-81 GO:0036264::dopamine monooxygenase activity confident hh_3hhs_A_1::5-81 very confident psy8588 265 Q5RID7::Sorting nexin-17 ::May be involved in several stages of intracellular protein trafficking. Plays a role in the sorting of endocytosed cell surface receptors. Interacts with membranes containing phosphatidylinositol 3-phosphate (PtdIns(3P)).::Danio rerio (taxid: 7955) portable no hit no match PF00373::FERM_M 93.68::82-119 GO:0005737::cytoplasm confident hh_1mix_A_1::81-167,170-191,196-196,211-211,214-225,228-244 confident psy14197 178 Q18685::Protein unc-112 ::Probable regulator of cell-extracellular matrix adhesion. Required during initial muscle assembly to form dense bodies and M-lines.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00373::FERM_M 99.31::21-73 GO:0005829::cytosol confident hh_4f7g_A_1::14-30,34-119,122-161 very confident psy8452 166 Q9UKN7::Unconventional myosin-XV ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Required for the arrangement of stereocilia in mature hair bundles.::Homo sapiens (taxid: 9606) portable no hit no match PF00373::FERM_M 97.42::102-159 GO:0043025::neuronal cell body confident hh_4eku_A_1::69-128,134-137,141-154 portable psy16510 147 Q7M4F1::Endocuticle structural glycoprotein SgAbd-4 ::Component of the abdominal endocuticle.::Schistocerca gregaria (taxid: 7010) portable no hit no match PF00379::Chitin_bind_4 99.70::54-110 GO:0005214::structural constituent of chitin-based cuticle confident hh_2rb6_A_1::56-73,82-102 portable psy8079 135 Q7M4F1::Endocuticle structural glycoprotein SgAbd-4 ::Component of the abdominal endocuticle.::Schistocerca gregaria (taxid: 7010) portable no hit no match PF00379::Chitin_bind_4 99.71::35-91 GO:0005615::extracellular space confident hh_2rb6_A_1::37-55,64-83 portable psy10199 218 Q7M4F3::Endocuticle structural glycoprotein SgAbd-2 ::Component of the abdominal endocuticle.::Schistocerca gregaria (taxid: 7010) portable no hit no match PF00379::Chitin_bind_4 99.63::115-171 GO:0005615::extracellular space confident no hit no match psy10193 135 Q7M4F3::Endocuticle structural glycoprotein SgAbd-2 ::Component of the abdominal endocuticle.::Schistocerca gregaria (taxid: 7010) portable no hit no match PF00379::Chitin_bind_4 99.71::32-88 GO:0005615::extracellular space confident hh_3bdu_A_1::34-53,62-80 portable psy6694 136 no hit no match no hit no match PF00379::Chitin_bind_4 99.67::34-82 GO:0031012::extracellular matrix confident no hit no match psy5467 77 Q10103::Chromo domain-containing protein 1 ::Component of the kinetochore which plays a role in stabilizing microtubules and so allowing accurate chromosome segregation. Has a role in the RNA interference (RNAi) pathway which is important for heterochromatin formation and accurate chromosome segregation. A member of the RNA-induced transcriptional silencing (RITS) complex which is involved in the biosynthesis of dsRNA from primer siRNAs provided by the RNA-directed RNA polymerase (RDRC) complex.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident no hit no match PF00385::Chromo 99.76::27-76 GO:0001940::male pronucleus confident hh_1ap0_A_1::17-76 very confident psy2752 99 Q13185::Chromobox protein homolog 3 ::Seems to be involved in transcriptional silencing in heterochromatin-like complexes. Recognizes and binds histone H3 tails methylated at 'Lys-9', leading to epigenetic repression. May contribute to the association of the heterochromatin with the inner nuclear membrane through its interaction with lamin B receptor (LBR). Involved in the formation of functional kinetochore through interaction with MIS12 complex proteins.::Homo sapiens (taxid: 9606) confident no hit no match PF00385::Chromo 99.71::10-60 GO:0005720::nuclear heterochromatin confident hh_3fdt_A_1::8-20,22-64 very confident psy12822 82 P16885::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. It is a crucial enzyme in transmembrane signaling.::Homo sapiens (taxid: 9606) confident no hit no match PF00387::PI-PLC-Y 100.00::2-68 GO:0005829::cytosol confident hh_3qr0_A_1::2-79 very confident psy10571 240 P25455::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase classes I and II ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00387::PI-PLC-Y 100.00::97-214 GO:0005829::cytosol confident hh_3qr0_A_1::88-236 very confident psy16203 806 P13217::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. Essential component of the phototransduction pathway.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00387::PI-PLC-Y 100.00::634-751 GO:0016028::rhabdomere confident hh_3ohm_B_1::434-779,782-790,794-803 very confident psy7644 316 Q8BLJ3::PI-PLC X domain-containing protein 3 ::::Mus musculus (taxid: 10090) confident no hit no match PF00388::PI-PLC-X 99.92::22-179 GO:0004871::signal transducer activity confident hh_3ea1_A_1::2-13,17-37,62-94,96-127,130-140,142-160,163-170,173-189,191-236,239-243,247-254,256-272,275-307 very confident psy9839 197 Q8K4S1::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes. PLCE1 is a bifunctional enzyme which also regulates small GTPases of the Ras superfamily through its Ras guanine-exchange factor (RasGEF) activity. As an effector of heterotrimeric and small G-protein, it may play a role in cell survival, cell growth, actin organization and T-cell activation.::Mus musculus (taxid: 10090) confident no hit no match PF00388::PI-PLC-X 99.84::97-180 GO:0005829::cytosol confident hh_3qr0_A_1::26-31,33-89,91-150,154-187 very confident psy3534 282 Q9DBR4::Amyloid beta A4 precursor protein-binding family B member 2 ::May modulate the internalization of beta-amyloid precursor protein.::Mus musculus (taxid: 10090) portable no hit no match PF00397::WW 98.86::91-119 GO:0006355::regulation of transcription, DNA-dependent confident hh_3d8d_A_1::229-274 very confident psy14121 118 Q3TZ89::Protein transport protein Sec31B ::As a component of the coat protein complex II (COPII), may function in vesicle budding and cargo export from the endoplasmic reticulum.::Mus musculus (taxid: 10090) portable no hit no match PF00400::WD40 95.76::26-57 GO:0005737::cytoplasm confident hh_2pm9_A_1::2-21,23-52,55-65,67-84 confident psy8836 118 Q7SZE3::Lethal(2) giant larvae protein homolog 2 ::Essential for hemidesmosome formation and maintenance of the cytoskeleton elements as well as cellular morphology in the basal epidermis during development. Also involved in regulating growth of the basal epidermis.::Danio rerio (taxid: 7955) portable no hit no match PF00400::WD40 96.91::5-38 GO:0005856::cytoskeleton confident hh_4aez_A_2::7-51,54-71 confident psy17930 110 Q8BPN8::DmX-like protein 2 ::May serve as a scaffold protein for MADD and RAB3GA on synaptic vesicles.::Mus musculus (taxid: 10090) portable no hit no match PF00400::WD40 94.30::23-39 GO:0008593::regulation of Notch signaling pathway confident hh_4aow_A_1::24-39 portable psy15692 278 Q5XI07::Lipoma-preferred partner homolog ::May play a structural role at sites of cell adhesion in maintaining cell shape and motility. In addition to these structural functions, it may also be implicated in signaling events and activation of gene transcription. May be involved in signal transduction from cell adhesion sites to the nucleus allowing successful integration of signals arising from soluble factors and cell-cell adhesion. Also suggested to serve as a scaffold protein upon which distinct protein complexes are assembled in the cytoplasm and in the nucleus.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00412::LIM 99.51::81-138 GO:0001725::stress fiber confident hh_2rgt_A_1::78-93,95-120,122-208,218-233 very confident psy15163 176 Q7Z3G6::Prickle-like protein 2 ::::Homo sapiens (taxid: 9606) confident no hit no match PF00412::LIM 99.56::74-135 GO:0002009::morphogenesis of an epithelium confident hh_1rut_X_1::72-83,85-91,96-136,138-175 very confident psy4350 107 A0JNI8::LIM/homeobox protein Lhx9 ::Involved in gonadal development.::Bos taurus (taxid: 9913) confident no hit no match PF00412::LIM 99.60::19-75 GO:0003714::transcription corepressor activity confident hh_2rgt_A_1::14-56,58-58,60-76,78-82,85-103 very confident psy15439 124 P53411::LIM/homeobox protein Lhx1 ::Transcriptional factor that defines subclasses of motoneurons that segregate into columns in the spinal cord and select distinct axon pathways. Acts in conjunction with ISL-2.::Gallus gallus (taxid: 9031) confident no hit no match PF00412::LIM 99.56::7-62 GO:0003714::transcription corepressor activity confident hh_2rgt_A_1::2-116 very confident psy14113 543 Q9VY77::LIM domain-containing protein jub ::Regulates organ size by inhibiting apoptosis and promoting cell proliferation by influencing the expression of G1/S-specific cyclin-E (CycE) and apoptosis 1 inhibitor (th). Negatively regulates the Hippo signaling pathway.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00412::LIM 99.17::319-373 GO:0003714::transcription corepressor activity confident hh_2rgt_A_1::316-329,331-358,360-373,378-384,406-473,483-497 very confident psy7479 170 Q8JFQ2::Rhombotin-1 ::May be involved in gene regulation within neural lineage cells potentially by direct DNA binding or by binding to other transcription factors.::Danio rerio (taxid: 7955) very confident no hit no match PF00412::LIM 99.63::84-142 GO:0005730::nucleolus very confident hh_2xjy_A_1::17-143 very confident psy12215 155 Q8JFQ2::Rhombotin-1 ::May be involved in gene regulation within neural lineage cells potentially by direct DNA binding or by binding to other transcription factors.::Danio rerio (taxid: 7955) very confident no hit no match PF00412::LIM 99.56::50-108 GO:0005730::nucleolus very confident hh_2rgt_A_1::1-22,25-26,28-46,49-108 very confident psy284 139 Q8JFQ2::Rhombotin-1 ::May be involved in gene regulation within neural lineage cells potentially by direct DNA binding or by binding to other transcription factors.::Danio rerio (taxid: 7955) very confident no hit no match PF00412::LIM 99.51::41-99 GO:0005730::nucleolus very confident hh_2rgt_A_1::37-76,79-81,83-101,104-138 very confident psy7480 204 Q8JFQ2::Rhombotin-1 ::May be involved in gene regulation within neural lineage cells potentially by direct DNA binding or by binding to other transcription factors.::Danio rerio (taxid: 7955) very confident no hit no match PF00412::LIM 99.60::118-176 GO:0005730::nucleolus very confident hh_2rgt_A_1::49-90,93-94,96-114,117-178 very confident psy2501 130 P49023::Paxillin ::Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion).::Homo sapiens (taxid: 9606) confident no hit no match PF00412::LIM 99.55::56-111 GO:0005925::focal adhesion confident hh_1v6g_A_1::45-112 very confident psy3656 185 Q5R7I1::Paxillin ::Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion).::Pongo abelii (taxid: 9601) confident no hit no match PF00412::LIM 99.46::85-140 GO:0005925::focal adhesion confident hh_2rgt_A_1::82-122,124-184 very confident psy12714 117 Q4U4S6::Xin actin-binding repeat-containing protein 2 ::Protects actin filaments from depolymerization.::Mus musculus (taxid: 10090) confident no hit no match PF00412::LIM 99.58::35-91 GO:0006915::apoptotic process confident hh_2d8y_A_1::30-107 very confident psy2231 201 Q9BIW5::LIM domain-containing protein C ::Binds to F-actin and may modulate the chemotactic response during early development and contribute to the maintenance of the strength of the actin cytoskeleton.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF00412::LIM 99.44::44-101 GO:0006915::apoptotic process confident hh_1b8t_A_1::43-92,94-130,136-155 very confident psy16163 85 no hit no match no hit no match PF00412::LIM 95.64::2-27 GO:0009968::negative regulation of signal transduction confident hh_1iml_A_1::2-18,20-36,38-43 confident psy12252 356 P50462::Cysteine and glycine-rich protein 3 ::Positive regulator of myogenesis. Plays a crucial and specific role in the organization of cytosolic structures in cardiomyocytes. Could play a role in mechanical stretch sensing. May be a scaffold protein that promotes the assembly of interacting proteins at Z-line structures. It is essential for calcineurin anchorage to the Z line. Required for stress-induced calcineurin-NFAT activation.::Mus musculus (taxid: 10090) portable no hit no match PF00412::LIM 99.46::24-80 GO:0015629::actin cytoskeleton confident hh_1b8t_A_1::18-93,187-194,198-204,212-212,216-220,223-225,237-242,274-322,324-356 very confident psy16551 281 Q24400::Muscle LIM protein Mlp84B ::Plays a role in cell differentiation late in myogenesis. Transcription factor Mef2 is essential for expression.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00412::LIM 99.36::98-155 GO:0015629::actin cytoskeleton confident hh_1b8t_A_1::95-138,140-184,186-241,243-272 very confident psy11345 282 A1ZA47::PDZ and LIM domain protein Zasp ::Regulator of cell matrix adhesion having two related functions, one upstream of Actn organizing the Z line and the other downstream of integrins regulating assembly of integrin adhesion sites. Also required for the formation of myotendinous junctions in muscles.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00412::LIM 99.25::114-171 GO:0030018::Z disc confident hh_2rgt_A_1::159-201,203-265,272-281 very confident psy10533 594 Q91XD2::LIM and senescent cell antigen-like-containing domain protein 2 ::Competes with LIMS1 for binding to ILK. Plays a role in modulating cell spreading and migration.::Mus musculus (taxid: 10090) confident no hit no match PF00412::LIM 99.40::8-65 GO:0031252::cell leading edge confident hh_2rgt_A_1::276-317,319-341,383-414,428-460 very confident psy327 168 Q7QJT4::Protein prickle ::Acts in a planar cell polarity (PCP) complex; polarization along the apical/basal axis of epithelial cells. PCP signaling in the wing disk requires the receptor fz and the cytoplasmic proteins dsh and pk. These act in a feedback loop leading to activation of the jnk cascade and subsequent polarized arrangement of hairs and bristles. Dgo and pk compete with one another for dsh binding, thereby modulating fz dsh activity and ensuring tight control over fz PCP signaling. Vang, stan and pk function together to regulate the establishment of tissue polarity in the adult eye.::Anopheles gambiae (taxid: 7165) confident no hit no match PF00412::LIM 99.35::73-130 GO:0031398::positive regulation of protein ubiquitination confident hh_2xqn_T_1::7-64,67-67,83-94,97-129 very confident psy8131 198 Q3ZBI6::Four and a half LIM domains protein 3 ::::Bos taurus (taxid: 9913) portable no hit no match PF00412::LIM 99.52::138-197 GO:0031430::M band confident hh_2rgt_A_1::85-116,118-148,151-197 very confident psy3653 202 Q8VI36::Paxillin ::Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion).::Mus musculus (taxid: 10090) confident no hit no match PF00412::LIM 99.61::146-201 GO:0032319::regulation of Rho GTPase activity confident no hit no match psy4072 191 P53405::Insulin gene enhancer protein isl-1 ::Binds to one of the cis-acting domain of the insulin gene enhancer. May be involved in subtype specialization of primary motoneurons.::Danio rerio (taxid: 7955) confident no hit no match PF00412::LIM 99.54::7-63 GO:0032729::positive regulation of interferon-gamma production confident hh_2jtn_A_1::3-20,22-45,47-47,49-49,78-155 very confident psy17880 120 O14639::Actin-binding LIM protein 1 ::May act as scaffold protein (By similarity). May play a role in the development of the retina. Has been suggested to play a role in axon guidance.::Homo sapiens (taxid: 9606) confident no hit no match PF00412::LIM 99.66::65-120 GO:0043234::protein complex confident hh_1rut_X_1::2-120 very confident psy11756 233 P49023::Paxillin ::Cytoskeletal protein involved in actin-membrane attachment at sites of cell adhesion to the extracellular matrix (focal adhesion).::Homo sapiens (taxid: 9606) portable no hit no match PF00412::LIM 99.47::160-214 GO:0043234::protein complex confident hh_2xqn_T_2::39-156 very confident psy8111 135 Q2KI95::Four and a half LIM domains protein 2 ::May function as a molecular transmitter linking various signaling pathways to transcriptional regulation. Negatively regulates the transcriptional repressor E4F1 and may function in cell growth. Inhibits the transcriptional activity of FOXO1 and its apoptotic function by enhancing the interaction of FOXO1 with SIRT1 and FOXO1 deacetylation.::Bos taurus (taxid: 9913) confident no hit no match PF00412::LIM 99.69::65-122 GO:0043234::protein complex confident hh_1b8t_A_1::3-27,29-74,76-134 very confident psy10674 138 Q7Z3G6::Prickle-like protein 2 ::::Homo sapiens (taxid: 9606) confident no hit no match PF00412::LIM 99.56::16-78 GO:0045197::establishment or maintenance of epithelial cell apical/basal polarity confident hh_1rut_X_1::12-31,38-79,81-126,128-134 very confident psy4437 131 P61375::LIM/homeobox protein Lhx5 ::Plays an essential role in the regulation of neuronal differentiation and migration during development of the central nervous system.::Mus musculus (taxid: 10090) portable no hit no match PF00412::LIM 99.63::5-60 GO:0050896::response to stimulus confident hh_2xjy_A_1::1-75,90-130 very confident psy5960 121 P50757::72 kDa type IV collagenase ::PEX, the C-terminal non-catalytic fragment of MMP2, posseses anti-angiogenic and anti-tumor properties and inhibits cell migration and cell adhesion to FGF2 and vitronectin. Ligand for integrin alpha-v/beta-3 on the surface of blood vessels.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match PF00413::Peptidase_M10 99.84::7-118 GO:0016477::cell migration confident hh_2ovx_A_1::3-95,103-118 very confident psy5970 169 Q9ULZ9::Matrix metalloproteinase-17 ::Endopeptidase that degrades various components of the extracellular matrix, such as fibrin. May be involved in the activation of membrane-bound precursors of growth factors or inflammatory mediators, such as tumor necrosis factor-alpha. May also be involved in tumoral process. Not obvious if able to proteolytically activate progelatinase A. Does not hydrolyze collagen types I, II, III, IV and V, gelatin, fibronectin, laminin, decorin nor alpha1-antitrypsin.::Homo sapiens (taxid: 9606) portable no hit no match PF00413::Peptidase_M10 98.97::81-159 GO:0050896::response to stimulus confident hh_1slm_A_1::3-17,19-65,72-108,110-158 very confident psy10939 101 P27816::Microtubule-associated protein 4 ::Non-neuronal microtubule-associated protein. Promotes microtubule assembly.::Homo sapiens (taxid: 9606) confident no hit no match PF00418::Tubulin-binding 99.62::14-42 GO:0005737::cytoplasm confident no hit no match psy10937 131 P15146::Microtubule-associated protein 2 ::The exact function of MAP2 is unknown but MAPs may stabilize the microtubules against depolymerization. They also seem to have a stiffening effect on microtubules.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00418::Tubulin-binding 99.60::65-94 GO:0043234::protein complex confident no hit no match psy11864 193 P98069::Bone morphogenetic protein 1 homolog ::::Strongylocentrotus purpuratus (taxid: 7668) confident no hit no match PF00431::CUB 99.75::118-189 GO:0005615::extracellular space confident hh_1nt0_A_1::1-27,32-169,172-186 very confident psy3691 137 Q99J86::Attractin ::Involved in the initial immune cell clustering during inflammatory response and may regulate chemotactic activity of chemokines (By similarity). May play a role in melanocortin signaling pathways that regulate energy homeostasis and hair color. Low-affinity receptor for agouti (By similarity). Has a critical role in normal myelination in the central nervous system.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00431::CUB 99.91::1-102 GO:0005615::extracellular space confident hh_1sfp_A_1::1-10,12-12,15-29,32-59,61-71,73-105 very confident psy8444 248 O43897::Tolloid-like protein 1 ::Protease which processes procollagen C-propeptides, such as chordin, pro-biglycan and pro-lysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.::Homo sapiens (taxid: 9606) confident no hit no match PF00431::CUB 99.91::10-119 GO:0009790::embryo development confident hh_1nt0_A_1::13-74,79-127,130-142,144-190,197-228 very confident psy2974 186 Q9DER7::Tolloid-like protein 1 ::Protease which processes procollagen C-propeptides, such as chordin, probiglycan and prolysyl oxidase. Required for the embryonic development. Predominant protease, which in the development, influences dorsal-ventral patterning and skeletogenesis.::Gallus gallus (taxid: 9031) portable no hit no match PF00431::CUB 99.43::81-152 GO:0010629::negative regulation of gene expression confident hh_1nt0_A_1::37-77,79-158 very confident psy12370 96 Q93212::Suppressor of lurcher protein 1 ::Accessory protein required for glutamate-gated currents. May participate in the gating of non-NMDA (N-methyl-D-aspartate) ionotropic glutamate receptors such as glr-1.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00431::CUB 99.50::40-94 GO:0032589::neuron projection membrane confident hh_2qqm_A_1::37-47,52-94 very confident psy3386 76 Q93212::Suppressor of lurcher protein 1 ::Accessory protein required for glutamate-gated currents. May participate in the gating of non-NMDA (N-methyl-D-aspartate) ionotropic glutamate receptors such as glr-1.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00431::CUB 99.49::6-51 GO:0032589::neuron projection membrane confident hh_1nt0_A_2::7-53,56-57,61-71 very confident psy16691 94 O70244::Cubilin ::Cotransporter which plays a role in lipoprotein, vitamin and iron metabolism, by facilitating their uptake. Binds to ALB, MB, Kappa and lambda-light chains, TF, hemoglobin, GC, SCGB1A1, APOA1, high density lipoprotein, and the GIF-cobalamin complex. The binding of all ligands requires calcium. Serves as important transporter in several absorptive epithelia, including intestine, renal proximal tubules and embryonic yolk sac. Interaction with LRP2 mediates its trafficking throughout vesicles and facilitates the uptake of specific ligands like GC, hemoglobin, ALB, TF and SCGB1A1. Interaction with AMN controls its trafficking to the plasma membrane and facilitates endocytosis of ligands. May play an important role in the development of the peri-implantation embryo through internalization of APOA1 and cholesterol. Binds to LGALS3 at the maternal-fetal interface.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00431::CUB 99.89::11-92 GO:0043085::positive regulation of catalytic activity confident hh_1nt0_A_1::10-75,78-93 very confident psy4099 190 O70244::Cubilin ::Cotransporter which plays a role in lipoprotein, vitamin and iron metabolism, by facilitating their uptake. Binds to ALB, MB, Kappa and lambda-light chains, TF, hemoglobin, GC, SCGB1A1, APOA1, high density lipoprotein, and the GIF-cobalamin complex. The binding of all ligands requires calcium. Serves as important transporter in several absorptive epithelia, including intestine, renal proximal tubules and embryonic yolk sac. Interaction with LRP2 mediates its trafficking throughout vesicles and facilitates the uptake of specific ligands like GC, hemoglobin, ALB, TF and SCGB1A1. Interaction with AMN controls its trafficking to the plasma membrane and facilitates endocytosis of ligands. May play an important role in the development of the peri-implantation embryo through internalization of APOA1 and cholesterol. Binds to LGALS3 at the maternal-fetal interface.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00431::CUB 99.94::9-123 GO:0043234::protein complex confident hh_1nt0_A_1::12-58,62-66,68-77,82-113,115-188 very confident psy12371 72 Q60997::Deleted in malignant brain tumors 1 protein ::May play roles in mucosal defense system and cellular immune defense. May play a role in liver regeneration. May be an important factor in fate decision and differentiation of transit-amplifying ductular (oval) cells within the hepatic lineage. May function as a binding protein in saliva for the regulation of taste sensation. May play a role as an opsonin receptor for SFTPD and SPAR in macrophage tissues throughout the body, including epithelial cells lining the gastrointestinal tract (By similarity). Required for terminal differentiation of columnar epithelial cells during early embryogenesis. Displays a broad calcium-dependent binding spectrum against both Gram-positive and Gram-negative bacteria, suggesting a role in defense against bacterial pathogens. Binds to a range of poly-sulfated and poly-phosphorylated ligands which may explain its broad bacterial-binding specificity. Inhibits cytoinvasion of S.enterica. Associates with the actin cytoskeleton and is involved in its remodeling during regulated exocytosis. Interacts with pancreatic zymogens in a pH-dependent manner and may act as a Golgi cargo receptor in the regulated secretory pathway of the pancreatic acinar cell.::Mus musculus (taxid: 10090) portable no hit no match PF00431::CUB 99.61::14-69 GO:0044464::cell part confident hh_2qqm_A_1::10-18,24-69 very confident psy8443 330 O57460::Dorsal-ventral patterning tolloid-like protein 1 ::Required for patterning ventral tissues of the tail. May increase bone morphogenetic protein (BMP) activity at the end of gastrulation by proteolytic cleavage of chordin and release of BMP from inactive complexes.::Danio rerio (taxid: 7955) confident no hit no match PF00431::CUB 99.94::219-328 GO:0048468::cell development confident hh_1nt0_A_1::63-110,115-127,132-215,217-283,288-330 very confident psy10 100 P26819::Beta-adrenergic receptor kinase 2 ::Specifically phosphorylates the agonist-occupied form of the beta-adrenergic and closely related receptors.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00433::Pkinase_C 97.39::51-86 GO:0005829::cytosol confident hh_2acx_A_1::2-62,65-91 very confident psy3183 126 Q03042::cGMP-dependent protein kinase, isozyme 1 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00433::Pkinase_C 97.44::78-113 GO:0005886::plasma membrane confident hh_2i0e_A_1::2-8,10-11,14-81,83-113 very confident psy8369 82 P16912::Protein kinase DC2 ::Does not have an essential role in development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00433::Pkinase_C 96.94::48-82 GO:0010468::regulation of gene expression confident hh_1o6l_A_1::2-82 very confident psy3349 111 Q16513::Serine/threonine-protein kinase N2 ::PKC-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. Plays a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion, tumor cell invasion and transcription activation signaling processes. Phosphorylates CTTN in hyaluronan-induced astrocytes and hence decreases CTTN ability to associates with filamentous actin. Phosphorylates HDAC5, therefore lead to impair HDAC5 import. Direct RhoA target required for the regulation of the maturation of primordial junctions into apical junction formation in bronchial epithelial cells. Required for G2/M phases of the cell cycle progression and abscission during cytokinesis in a ECT2-dependent manner. Stimulates FYN kinase activity that is required for establishment of skin cell-cell adhesion during keratinocytes differentiation. Regulates epithelial bladder cells speed and direction of movement during cell migration and tumor cell invasion. Inhibits Akt pro-survival-induced kinase activity. Mediates Rho protein-induced transcriptional activation via the c-fos serum response factor (SRF). Phosphorylates HCV NS5B leading to stimulation of HCV RNA replication.::Homo sapiens (taxid: 9606) confident no hit no match PF00433::Pkinase_C 98.69::64-110 GO:0042826::histone deacetylase binding confident hh_3a62_A_1::2-86 very confident psy1025 258 P67998::Ribosomal protein S6 kinase beta-1 ::Serine/threonine-protein kinase that acts downstream of mTOR signaling in response to growth factors and nutrients to promote cell proliferation, cell growth and cell cycle progression. Regulates protein synthesis through phosphorylation of EIF4B, RPS6 and EEF2K, and contributes to cell survival by repressing the pro-apoptotic function of BAD. Under conditions of nutrient depletion, the inactive form associates with the EIF3 translation initiation complex. Upon mitogenic stimulation, phosphorylation by the mammalian target of rapamycin complex 1 (mTORC1) leads to dissociation from the EIF3 complex and activation. The active form then phosphorylates and activates several substrates in the preinitiation complex, including the EIF2B complex and the cap-binding complex component EIF4B. Also controls translation initiation by phosphorylating a negative regulator of EIF4A, PDCD4, targeting it for ubiquitination and subsequent proteolysis. Promotes initiation of the pioneer round of protein synthesis by phosphorylating POLDIP3/SKAR. In response to IGF1, activates translation elongation by phosphorylating EEF2 kinase (EEF2K), which leads to its inhibition and thus activation of EEF2. Also plays a role in feedback regulation of mTORC2 by mTORC1 by phosphorylating RICTOR, resulting in the inhibition of mTORC2 and AKT1 signaling. Mediates cell survival by phosphorylating the pro-apoptotic protein BAD and suppressing its pro-apoptotic function. Phosphorylates mitochondrial RMP leading to dissociation of a RMP:PPP1CC complex. The free mitochondrial PPP1CC can then dephosphorylate RPS6KB1 at 'Thr-412', which is proposed to be a negative feedback mechanism for the RPS6KB1 anti-apoptotic function. Mediates TNF-alpha-induced insulin resistance by phosphorylating IRS1 at multiple serine residues, resulting in accelerated degradation of IRS1. In cells lacking functional TSC1-2 complex, constitutively phosphorylates and inhibits GSK3B. May be involved in cytoskeletal rearrangement through binding to neurabin.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match PF00433::Pkinase_C 98.28::113-157 GO:0048699::generation of neurons confident hh_3a62_A_1::8-12,16-137 very confident psy4475 849 O97592::Dystrophin ::Anchors the extracellular matrix to the cytoskeleton via F-actin. Ligand for dystroglycan. Component of the dystrophin-associated glycoprotein complex which accumulates at the neuromuscular junction (NMJ) and at a variety of synapses in the peripheral and central nervous systems and has a structural function in stabilizing the sarcolemma. Also implicated in signaling events and synaptic transmission.::Canis familiaris (taxid: 9615) portable no hit no match PF00435::Spectrin 98.83::666-765 GO:0005737::cytoplasm confident hh_3kbt_A_2::558-584,586-625,629-665,667-729,731-732,734-768,770-833 confident psy6936 1032 P13395::Spectrin alpha chain ::Spectrin is the major constituent of the cytoskeletal network underlying the erythrocyte plasma membrane. It associates with band 4.1 and actin to form the cytoskeletal superstructure of the erythrocyte plasma membrane. Essential for larval survival and development. Stabilizes cell to cell interactions that are critical for the maintenance of cell shape and subcellular organization within embryonic tissues. Lva and spectrin may form a Golgi-based scaffold that mediates interaction of Golgi bodies with microtubules and facilitates Golgi-derived membrane secretion required for the formation of furrows during cellularization.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00435::Spectrin 99.13::259-362 GO:0005794::Golgi apparatus confident hh_3f31_A_1::6-149 very confident psy10628 238 P16546::Spectrin alpha chain, non-erythrocytic 1 ::Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.::Mus musculus (taxid: 10090) portable no hit no match PF00435::Spectrin 99.65::128-230 GO:0005938::cell cortex confident hh_1quu_A_1::20-236 very confident psy10627 92 P16546::Spectrin alpha chain, non-erythrocytic 1 ::Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.::Mus musculus (taxid: 10090) portable no hit no match PF00435::Spectrin 98.63::2-64 GO:0005938::cell cortex confident hh_3fb2_A_1::2-91 very confident psy11245 87 Q0KI50::Dystrophin, isoform D ::Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. May play a role in anchoring the cytoskeleton to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00435::Spectrin 99.03::9-80 GO:0007274::neuromuscular synaptic transmission confident hh_3f31_A_1::2-7,9-33,36-80 confident psy11246 101 Q9VDW3::Dystrophin, isoform B ::Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. May play a role in anchoring the cytoskeleton to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00435::Spectrin 98.67::2-67 GO:0007274::neuromuscular synaptic transmission confident hh_1s35_A_1::3-31,33-70,72-90 confident psy3215 186 Q9VDW6::Dystrophin, isoforms A/C/F/G/H ::Required for the maintenance of appropriate synaptic retrograde communication and the stabilization of muscle cell architecture or physiology. Both det and Dg are required for maintenance of early dpp signaling in the presumptive crossvein. Isoform A is not required to maintain muscle integrity, but plays a role in neuromuscular homeostasis by regulating neurotransmitter release. May play a role in anchoring the cytoskeleton to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00435::Spectrin 99.68::33-138 GO:0007274::neuromuscular synaptic transmission confident hh_3kbt_A_2::2-33,35-56,59-141 confident psy11911 279 no hit no match no hit no match PF00435::Spectrin 97.94::167-261 GO:0008305::integrin complex confident hh_1u4q_A_1::1-63,65-91,93-167,169-231,233-263 confident psy10634 303 P16546::Spectrin alpha chain, non-erythrocytic 1 ::Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.::Mus musculus (taxid: 10090) portable no hit no match PF00435::Spectrin 99.53::84-187 GO:0016043::cellular component organization confident hh_1cun_A_1::85-193,223-302 very confident psy13474 105 Q8BL06::Inactive ubiquitin carboxyl-terminal hydrolase 54 ::Has no peptidase activity.::Mus musculus (taxid: 10090) confident no hit no match PF00443::UCH 98.59::1-94 GO:0004221::ubiquitin thiolesterase activity confident hh_2ayn_A_1::1-12,14-30,34-95 confident psy15314 232 Q8CBQ5::Phosphatidylinositol 4-kinase type 2-beta ::Together with PI4K2A and the type III PI4Ks (PIK4CA and PIK4CB) it contributes to the overall PI4-kinase activity of the cell. This contribution may be especially significant in plasma membrane, endosomal and Golgi compartments. The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3). Contributes to the production of InsP3 in stimulated cells and is likely to be involved in the regulation of vesicular trafficking.::Mus musculus (taxid: 10090) confident no hit no match PF00454::PI3_PI4_kinase 99.14::68-222 GO:0043204::perikaryon confident hh_1cja_A_1::101-126 portable psy12097 74 P63091::Guanine nucleotide-binding protein G(s) subunit alpha ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(s) protein is involved in hormonal regulation of adenylate cyclase: it activates the cyclase in response to beta-adrenergic stimuli.::Canis familiaris (taxid: 9615) confident no hit no match PF00503::G-alpha 99.39::12-74 GO:0005829::cytosol confident bp_1azs_C_1::1-73 very confident psy6618 109 P51875::Guanine nucleotide-binding protein G(o) subunit alpha ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The G(o) protein function is not clear. Polarity determinants (par genes) may regulate lin-5/gpr-1/gpr-2/goa-1 locally to create the asymmetric forces that drive spindle movement.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00503::G-alpha 98.93::1-91 GO:0005938::cell cortex confident hh_1zcb_A_1::1-34,40-94 very confident psy6616 71 P16378::Guanine nucleotide-binding protein G(o) subunit alpha 47A ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. Plays a role in glial cell differentiation during embryogenesis; loco, G-ialpha65A and the G-protein coupled receptor, moody, are required in the surface glia to achieve effective insulation of the nerve cord.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00503::G-alpha 99.66::2-60 GO:0030496::midbody very confident hh_1cip_A_1::2-6,8-71 very confident psy3657 113 Q19572::Guanine nucleotide-binding protein alpha-12 subunit ::Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF00503::G-alpha 99.58::21-111 GO:0043234::protein complex confident hh_1zcb_A_1::2-22,24-73 very confident psy14955 191 P35500::Sodium channel protein para ::Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00520::Ion_trans 99.65::67-189 GO:0001666::response to hypoxia very confident hh_3rvy_A_1::22-89,95-117,121-184 very confident psy12306 1643 Q13698::Voltage-dependent L-type calcium channel subunit alpha-1S ::Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1S gives rise to L-type calcium currents. Long-lasting (L-type) calcium channels belong to the 'high-voltage activated' (HVA) group. They are blocked by dihydropyridines (DHP), phenylalkylamines, benzothiazepines, and by omega-agatoxin-IIIA (omega-Aga-IIIA). They are however insensitive to omega-conotoxin-GVIA (omega-CTx-GVIA) and omega-agatoxin-IVA (omega-Aga-IVA). Calcium channels containing the alpha-1S subunit play an important role in excitation-contraction coupling in skeletal muscle.::Homo sapiens (taxid: 9606) confident no hit no match PF00520::Ion_trans 99.78::941-1166 GO:0005891::voltage-gated calcium channel complex confident hh_4dxw_A_1::899-987,1002-1002,1010-1074,1084-1117,1141-1175 very confident psy6333 371 P17970::Potassium voltage-gated channel protein Shab ::Mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00520::Ion_trans 99.69::73-246 GO:0008076::voltage-gated potassium channel complex confident hh_2r9r_B_1::5-25,30-127,137-277 very confident psy694 306 Q14721::Potassium voltage-gated channel subfamily B member 1 ::Mediates the voltage-dependent potassium ion permeability of excitable membranes. Channels open or close in response to the voltage difference across the membrane, letting potassium ions pass in accordance with their electrochemical gradient.::Homo sapiens (taxid: 9606) confident no hit no match PF00520::Ion_trans 99.83::35-225 GO:0008076::voltage-gated potassium channel complex confident hh_2r9r_B_1::2-25,27-91,101-237 very confident psy16082 252 Q90805::Cyclic nucleotide-gated channel cone photoreceptor subunit alpha ::Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cyclic GMP which leads to an opening of the cation channel and thereby causing a depolarization of cone photoreceptors.::Gallus gallus (taxid: 9031) portable no hit no match PF00520::Ion_trans 99.32::84-242 GO:0030553::cGMP binding confident hh_1orq_C_1::48-70,72-103,116-124,127-205,216-216,221-244,246-251 confident psy4746 314 Q9JJZ9::Cyclic nucleotide-gated cation channel beta-3 ::Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cGMP which leads to an opening of the cation channel and thereby causing a depolarization of rod photoreceptors. Essential for the generation of light-evoked electrical responses in the red-, green- and blue sensitive cones (By similarity). Induced a flickering channel gating, weakened the outward rectification in the presence of extracellular calcium, increased sensitivity for L-cis diltiazem and enhanced the cAMP efficacy of the channel when coexpressed with CNGA3.::Mus musculus (taxid: 10090) portable no hit no match PF00520::Ion_trans 99.39::129-313 GO:0030553::cGMP binding confident hh_3ukn_A_1::36-82 confident psy15554 339 P22462::Potassium voltage-gated channel subfamily C member 2 ::Mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient. Channel properties are modulated by subunit assembly.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00520::Ion_trans 99.31::93-242 GO:0033267::axon part confident hh_2r9r_B_1::15-76,79-209,212-216,218-247,250-265,271-281 very confident psy6499 101 O54898::Voltage-dependent T-type calcium channel subunit alpha-1G ::Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1G gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite negative potentials and a voltage-dependent inactivation. T-type channels serve pacemaking functions in both central neurons and cardiac nodal cells and support calcium signaling in secretory cells and vascular smooth muscle. They may also be involved in the modulation of firing patterns of neurons which is important for information processing as well as in cell growth processes.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00520::Ion_trans 96.74::68-99 GO:0043204::perikaryon confident hh_3rvy_A_1::21-89,91-100 very confident psy12189 131 Q8BXR5::Sodium leak channel non-selective protein ::Voltage-independent, cation-nonselective channel which is permeable to sodium, potassium and calcium ions. Responsible for the background sodium ion leak current in neurons and controls neuronal excitability. Activated either by neuropeptides substance P or neurotensin. Required for normal respiratory rhythm and neonatal survival.::Mus musculus (taxid: 10090) confident no hit no match PF00520::Ion_trans 98.17::2-51 GO:0043679::axon terminus confident hh_4dxw_A_1::1-23,25-59 confident psy3171 305 P08510::Potassium voltage-gated channel protein Shaker ::Voltage-dependent potassium channel involved in regulation of sleep need or efficiency. Mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00520::Ion_trans 98.97::99-211 GO:0048047::mating behavior, sex discrimination confident hh_2r9r_B_1::9-152,169-212 very confident psy6930 162 O95180::Voltage-dependent T-type calcium channel subunit alpha-1H ::Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1H gives rise to T-type calcium currents. T-type calcium channels belong to the "low-voltage activated (LVA)" group and are strongly blocked by nickel and mibefradil. A particularity of this type of channels is an opening at quite negative potentials, and a voltage-dependent inactivation. T-type channels serve pacemaking functions in both central neurons and cardiac nodal cells and support calcium signaling in secretory cells and vascular smooth muscle. They may also be involved in the modulation of firing patterns of neurons which is important for information processing as well as in cell growth processes.::Homo sapiens (taxid: 9606) confident no hit no match PF00520::Ion_trans 98.72::2-88 GO:0070509::calcium ion import confident hh_4dxw_A_1::2-45,58-89 confident psy10378 62 O42422::Ephrin type-A receptor 7 ::Receptor tyrosine kinase which binds promiscuously GPI-anchored ephrin-A family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Among GPI-anchored ephrin-A ligands, EFNA5 is a cognate/functional ligand for EPHA7 and their interaction regulates brain development modulating cell-cell adhesion and repulsion. Has a repellent activity on axons and is for instance involved in the guidance of corticothalamic axons and in the proper topographic mapping of retinal axons to the colliculus. May also regulate brain development through a caspase(CASP3)-dependent proapoptotic activity. Forward signaling may result in activation of components of the ERK signaling pathway including MAP2K1, MAP2K2, MAPK1 AND MAPK3 which are phosphorylated upon activation of EPHA7.::Gallus gallus (taxid: 9031) confident no hit no match PF00536::SAM_1 99.60::1-49 GO:0005004::GPI-linked ephrin receptor activity confident hh_3hil_A_1::1-48 very confident psy2001 202 P39769::Polyhomeotic-proximal chromatin protein ::Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. Component of the PcG multiprotein PRC1 complex, a complex that acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-118', rendering chromatin heritably changed in its expressibility. Plays a role in regulating the expression of other pair-rule genes such as eve, ftz, and H.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00536::SAM_1 99.69::122-186 GO:0071300::cellular response to retinoic acid confident hh_1pk1_B_1::116-189 very confident psy12708 695 Q04206::Transcription factor p65 ::NF-kappa-B is a pleiotropic transcription factor which is present in almost all cell types and is involved in many biological processed such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. NF-kappa-B is a homo- or heterodimeric complex formed by the Rel-like domain-containing proteins RELA/p65, RELB, NFKB1/p105, NFKB1/p50, REL and NFKB2/p52 and the heterodimeric p65-p50 complex appears to be most abundant one. The dimers bind at kappa-B sites in the DNA of their target genes and the individual dimers have distinct preferences for different kappa-B sites that they can bind with distinguishable affinity and specificity. Different dimer combinations act as transcriptional activators or repressors, respectively. NF-kappa-B is controlled by various mechanisms of post-translational modification and subcellular compartmentalization as well as by interactions with other cofactors or corepressors. NF-kappa-B complexes are held in the cytoplasm in an inactive state complexed with members of the NF-kappa-B inhibitor (I-kappa-B) family. In a conventional activation pathway, I-kappa-B is phosphorylated by I-kappa-B kinases (IKKs) in response to different activators, subsequently degraded thus liberating the active NF-kappa-B complex which translocates to the nucleus. NF-kappa-B heterodimeric p65-p50 and p65-c-Rel complexes are transcriptional activators. The NF-kappa-B p65-p65 complex appears to be involved in invasin-mediated activation of IL-8 expression. The inhibitory effect of I-kappa-B upon NF-kappa-B the cytoplasm is exerted primarily through the interaction with p65. p65 shows a weak DNA-binding site which could contribute directly to DNA binding in the NF-kappa-B complex. Associates with chromatin at the NF-kappa-B promoter region via association with DDX1.::Homo sapiens (taxid: 9606) portable no hit no match PF00554::RHD 100.00::41-216 GO:0043234::protein complex confident hh_1ikn_A_1::39-113,115-162,175-259,265-333 very confident psy11902 336 O94916::Nuclear factor of activated T-cells 5 ::Plays a role in the inducible expression of genes. Regulates hypertonicity-induced cellular accumulation of osmolytes.::Homo sapiens (taxid: 9606) portable no hit no match PF00554::RHD 100.00::93-254 GO:2000301::negative regulation of synaptic vesicle exocytosis confident hh_1imh_C_1::84-214,218-236,238-279,300-336 very confident psy16076 161 Q9NPB6::Partitioning defective 6 homolog alpha ::Adapter protein involved in asymmetrical cell division and cell polarization processes. Probably involved in the formation of epithelial tight junctions. Association with PARD3 may prevent the interaction of PARD3 with F11R/JAM1, thereby preventing tight junction assembly. The PARD6-PARD3 complex links GTP-bound Rho small GTPases to atypical protein kinase C proteins.::Homo sapiens (taxid: 9606) portable no hit no match PF00564::PB1 99.20::25-95 GO:0005923::tight junction confident hh_1wmh_B_1::23-94 very confident psy5165 169 Q62074::Protein kinase C iota type ::Calcium- and diacylglycerol-independent serine/ threonine-protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway. Is necessary for BCR-ABL oncogene-mediated resistance to apoptotic drug in leukemia cells, protecting leukemia cells against drug-induced apoptosis. In cultured neurons, prevents amyloid beta protein-induced apoptosis by interrupting cell death process at a very early step. In glioblastoma cells, may function downstream of phosphatidylinositol 3-kinase (PI3K) and PDPK1 in the promotion of cell survival by phosphorylating and inhibiting the pro-apoptotic factor BAD. Can form a protein complex in non-small cell lung cancer (NSCLC) cells with PARD6A and ECT2 and regulate ECT2 oncogenic activity by phosphorylation, which in turn promotes transformed growth and invasion. In response to nerve growth factor (NGF), acts downstream of SRC to phosphorylate and activate IRAK1, allowing the subsequent activation of NF-kappa-B and neuronal cell survival. Functions in the organization of the apical domain in epithelial cells by phosphorylating EZR. This step is crucial for activation and normal distribution of EZR at the early stages of intestinal epithelial cell differentiation. Forms a protein complex with LLGL1 and PARD6B independently of PARD3 to regulate epithelial cell polarity. Plays a role in microtubule dynamics in the early secretory pathway through interaction with RAB2A and GAPDH and recruitment to vesicular tubular clusters (VTCs). In human coronary artery endothelial cells (HCAEC), is activated by saturated fatty acids and mediates lipid-induced apoptosis (By similarity). Downstream of PI3K is required for insulin-stimulated glucose transport. Activates RAB4A and promotes its associtation with KIF3A which is required for the insulin-induced SLC2A4/GLUT4 translocation in adipocytes. Is essential in early embryogenesis and development of differentiating photoreceptors by playing a role in the establishment of epithelial and neuronal polarity.::Mus musculus (taxid: 10090) confident no hit no match PF00564::PB1 99.51::79-161 GO:0016477::cell migration confident hh_1vd2_A_1::76-162 very confident psy5166 76 Q62074::Protein kinase C iota type ::Calcium- and diacylglycerol-independent serine/ threonine-protein kinase that plays a general protective role against apoptotic stimuli, is involved in NF-kappa-B activation, cell survival, differentiation and polarity, and contributes to the regulation of microtubule dynamics in the early secretory pathway. Is necessary for BCR-ABL oncogene-mediated resistance to apoptotic drug in leukemia cells, protecting leukemia cells against drug-induced apoptosis. In cultured neurons, prevents amyloid beta protein-induced apoptosis by interrupting cell death process at a very early step. In glioblastoma cells, may function downstream of phosphatidylinositol 3-kinase (PI3K) and PDPK1 in the promotion of cell survival by phosphorylating and inhibiting the pro-apoptotic factor BAD. Can form a protein complex in non-small cell lung cancer (NSCLC) cells with PARD6A and ECT2 and regulate ECT2 oncogenic activity by phosphorylation, which in turn promotes transformed growth and invasion. In response to nerve growth factor (NGF), acts downstream of SRC to phosphorylate and activate IRAK1, allowing the subsequent activation of NF-kappa-B and neuronal cell survival. Functions in the organization of the apical domain in epithelial cells by phosphorylating EZR. This step is crucial for activation and normal distribution of EZR at the early stages of intestinal epithelial cell differentiation. Forms a protein complex with LLGL1 and PARD6B independently of PARD3 to regulate epithelial cell polarity. Plays a role in microtubule dynamics in the early secretory pathway through interaction with RAB2A and GAPDH and recruitment to vesicular tubular clusters (VTCs). In human coronary artery endothelial cells (HCAEC), is activated by saturated fatty acids and mediates lipid-induced apoptosis (By similarity). Downstream of PI3K is required for insulin-stimulated glucose transport. Activates RAB4A and promotes its associtation with KIF3A which is required for the insulin-induced SLC2A4/GLUT4 translocation in adipocytes. Is essential in early embryogenesis and development of differentiating photoreceptors by playing a role in the establishment of epithelial and neuronal polarity.::Mus musculus (taxid: 10090) confident no hit no match PF00564::PB1 99.60::2-76 GO:0016477::cell migration confident hh_1vd2_A_1::2-76 very confident psy4551 321 Q80VL1::Tudor and KH domain-containing protein ::::Mus musculus (taxid: 10090) portable no hit no match PF00567::TUDOR 99.91::41-191 GO:0005739::mitochondrion confident hh_2wac_A_1::43-68,70-87,90-122,150-213,217-227,237-249,252-268 very confident psy9200 120 Q03173::Protein enabled homolog ::Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. ENAH induces the formation of F-actin rich outgrowths in fibroblasts. Acts synergistically with BAIAP2-alpha and downstream of NTN1 to promote filipodia formation. Required for actin-based mobility of Listeria monocytogenes.::Mus musculus (taxid: 10090) confident no hit no match PF00568::WH1 99.87::33-120 GO:0030424::axon confident hh_1evh_A_1::32-87,94-120 very confident psy9215 73 Q8N8S7::Protein enabled homolog ::Ena/VASP proteins are actin-associated proteins involved in a range of processes dependent on cytoskeleton remodeling and cell polarity such as axon guidance and lamellipodial and filopodial dynamics in migrating cells. ENAH induces the formation of F-actin rich outgrowths in fibroblasts. Acts synergistically with BAIAP2-alpha and downstream of NTN1 to promote filipodia formation. Required for the actin-based mobility of Listeria monocytogenes.::Homo sapiens (taxid: 9606) confident no hit no match PF00568::WH1 99.75::1-50 GO:0030424::axon confident hh_1egx_A_1::1-56 very confident psy11599 76 Q66JG9::Sprouty-related, EVH1 domain-containing protein 1 ::Tyrosine kinase substrate that inhibits growth-factor-mediated activation of MAP kinase.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00568::WH1 99.93::2-66 GO:0043086::negative regulation of catalytic activity confident hh_2jp2_A_1::2-72 very confident psy4624 160 P91621::Protein still life, isoform SIF type 1 ::Regulates synaptic differentiation through the organization of actin cytoskeleton possibly by activating Rho-like GTPases. Is likely a factor in the cascade of Rac1 or Cdc42 in the neurons.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00568::WH1 99.22::40-136 GO:0050770::regulation of axonogenesis confident hh_1egx_A_1::39-49,53-63,66-116,119-137 confident psy17151 86 Q80VW5::Whirlin ::Necessary for elongation and maintenance of inner and outer hair cell stereocilia in the organ of Corti in the inner ear.::Mus musculus (taxid: 10090) portable no hit no match PF00595::PDZ 96.26::16-76 GO:0072499::photoreceptor cell axon guidance confident hh_1ufx_A_1::15-76 very confident psy12045 117 Q09103::Eye-specific diacylglycerol kinase ::Required for the maintenance of phospholipid turnover within the photoreceptor.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00609::DAGK_acc 99.11::52-87 GO:0043052::thermotaxis confident no hit no match psy10896 302 P49809::Regulator of G-protein signaling egl-10 ::Regulates G protein signaling in nervous system.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00610::DEP 98.97::14-68 GO:0005829::cytosol confident hh_2pbi_A_1::14-30,34-99,102-178,194-302 very confident psy10868 649 Q5U3Q6::Cdc42-interacting protein 4 homolog ::Required to coordinate membrane tubulation with reorganization of the actin cytoskeleton during endocytosis.::Danio rerio (taxid: 7955) portable no hit no match PF00611::FCH 99.62::1-86 GO:0008582::regulation of synaptic growth at neuromuscular junction confident hh_2efl_A_1::2-116,170-342 very confident psy10068 157 O75044::SLIT-ROBO Rho GTPase-activating protein 2 ::Putative GTPase-activating protein for Rho family small GTPases.::Homo sapiens (taxid: 9606) portable no hit no match PF00611::FCH 99.30::3-86 GO:0044763::single-organism cellular process confident hh_2efl_A_1::2-58,62-89 confident psy5492 361 Q61644::Protein kinase C and casein kinase substrate in neurons protein 1 ::May play a role in vesicle formation and transport.::Mus musculus (taxid: 10090) portable no hit no match PF00611::FCH 99.50::42-106 GO:0045806::negative regulation of endocytosis confident hh_3i2w_A_1::41-249,313-355 very confident psy14956 147 P35500::Sodium channel protein para ::Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00612::IQ 96.21::55-72 GO:0001666::response to hypoxia confident hh_4dck_A_1::1-28,30-73 very confident psy14982 72 no hit no match no hit no match PF00612::IQ 98.70::30-50 GO:0005516::calmodulin binding confident hh_2ix7_C_1::7-52 very confident psy1249 64 Q08DC7::Regulator of G-protein signaling 19 ::Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds to G-alpha subfamily 1 members, with the order G(i)a3 > G(i)a1 > G(o)a >> G(z)a/G(i)a2. Activity on G(z)-alpha is inhibited by phosphorylation and palmitoylation of the G-protein.::Bos taurus (taxid: 9913) confident no hit no match PF00615::RGS 98.61::3-37 GO:0005096::GTPase activator activity confident hh_1cmz_A_1::1-43 very confident psy3228 410 Q9V407::Axin ::Inhibitor of the WG signaling pathway. Down-regulates beta-catenin (armadillo=ARM). Probably facilitate the phosphorylation of beta-catenin and APC by GSK3B (zeste-white 3=ZW3).::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00615::RGS 99.81::52-157 GO:0005737::cytoplasm confident hh_1agr_E_1::40-129,137-157 very confident psy17353 125 P26819::Beta-adrenergic receptor kinase 2 ::Specifically phosphorylates the agonist-occupied form of the beta-adrenergic and closely related receptors.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00615::RGS 98.14::54-113 GO:0005829::cytosol confident bp_3krw_A_1::2-92 very confident psy10901 137 Q9Z2H2::Regulator of G-protein signaling 6 ::Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Activity on G(o)-alpha is specifically enhanced by the RGS6/Gbeta5 dimer.::Mus musculus (taxid: 10090) confident no hit no match PF00615::RGS 99.95::9-123 GO:0005829::cytosol confident hh_2bv1_A_1::4-128 very confident psy15721 571 O46470::Regulator of G-protein signaling 7 ::Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Activity on G(o)-alpha is specifically enhanced by the RGS6/Gbeta5 dimer.::Bos taurus (taxid: 9913) portable no hit no match PF00615::RGS 99.89::216-331 GO:0043234::protein complex confident hh_1fqi_A_1::193-311,313-339 very confident psy1250 111 Q9PWA1::Regulator of G-protein signaling 20 ::Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.::Gallus gallus (taxid: 9031) confident no hit no match PF00615::RGS 99.69::6-84 GO:0043234::protein complex confident hh_1zv4_X_1::6-90 very confident psy16714 68 Q9PWA0::Regulator of G-protein signaling 17 ::Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.::Gallus gallus (taxid: 9031) confident no hit no match PF00615::RGS 99.74::4-68 GO:0044445::cytosolic part confident bp_1zv4_X_1::13-68 very confident psy10818 274 P28818::Ras-specific guanine nucleotide-releasing factor 1 ::Promotes the exchange of Ras-bound GDP by GTP.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00617::RasGEF 100.00::127-273 GO:0005829::cytosol confident hh_2ije_S_1::129-273 very confident psy3012 272 Q02384::Son of sevenless homolog 2 ::Promotes the exchange of Ras-bound GDP by GTP.::Mus musculus (taxid: 10090) confident no hit no match PF00617::RasGEF 100.00::67-251 GO:0005829::cytosol confident hh_2ii0_A_1::2-12,14-271 very confident psy15696 68 Q6P112::Ral guanine nucleotide dissociation stimulator-like 1 ::Probable guanine nucleotide exchange factor.::Danio rerio (taxid: 7955) confident no hit no match PF00617::RasGEF 99.37::7-61 GO:0005829::cytosol confident hh_2ije_S_1::6-19,21-67 very confident psy1087 454 Q13905::Rap guanine nucleotide exchange factor 1 ::Guanine nucleotide-releasing protein that binds to SH3 domain of CRK and GRB2/ASH. Transduces signals from CRK to activate RAS.::Homo sapiens (taxid: 9606) confident no hit no match PF00617::RasGEF 100.00::178-355 GO:0007165::signal transduction confident hh_3qxl_A_1::172-332,335-336,346-401,404-406 very confident psy3927 262 Q6DHR3::Ras-GEF domain-containing family member 1B-A ::Guanine nucleotide exchange factor (GEF) for Ras family proteins (in vitro).::Danio rerio (taxid: 7955) confident no hit no match PF00617::RasGEF 100.00::16-215 GO:0016477::cell migration confident hh_3cf6_E_1::12-13,16-52,60-166,178-203,205-262 very confident psy11553 146 P34578::Rap guanine nucleotide exchange factor 1 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00617::RasGEF 100.00::1-145 GO:0043234::protein complex confident hh_3cf6_E_1::1-145 very confident psy15588 461 Q9Z1C7::Rap guanine nucleotide exchange factor 4 (Fragment) ::Guanine nucleotide exchange factor (GEF) for RAP1A, RAP1B and RAP2A small GTPases that is activated by binding cAMP. Seems not to activate RAB3A. Involved in cAMP-dependent, PKA-independent exocytosis through interaction with RIMS2.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00617::RasGEF 100.00::240-424 GO:0043234::protein complex confident hh_3cf6_E_1::2-99,103-157,170-172,176-454 very confident psy10812 723 P28818::Ras-specific guanine nucleotide-releasing factor 1 ::Promotes the exchange of Ras-bound GDP by GTP.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00617::RasGEF 100.00::260-448 GO:0050794::regulation of cellular process confident hh_2ije_S_1::262-436,440-480,521-540 very confident psy3929 120 Q6DHR3::Ras-GEF domain-containing family member 1B-A ::Guanine nucleotide exchange factor (GEF) for Ras family proteins (in vitro).::Danio rerio (taxid: 7955) confident no hit no match PF00618::RasGEF_N 99.08::40-90 GO:0016477::cell migration confident hh_3ksy_A_1::28-54,57-90 confident psy8552 523 P23727::Phosphatidylinositol 3-kinase regulatory subunit alpha ::Binds to activated (phosphorylated) protein-Tyr kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane. Necessary for the insulin-stimulated increase in glucose uptake and glycogen synthesis in insulin-sensitive tissues. Plays an important role in signaling in response to FGFR1, FGFR2, FGFR3, FGFR4, KITLG/SCF, KIT, PDGFRA and PDGFRB. Likewise, plays a role in ITGB2 signaling.::Bos taurus (taxid: 9913) portable no hit no match PF00620::RhoGAP 99.92::21-165 GO:0005942::phosphatidylinositol 3-kinase complex confident hh_2iug_A_1::209-319 very confident psy5715 107 A2RUV4::Rho GTPase-activating protein 21 ::GTPase-activating protein (GAP) for rhoa and cdc42.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00620::RhoGAP 99.46::8-64 GO:0030675::Rac GTPase activator activity confident hh_1tx4_A_1::9-66,68-73,85-101 very confident psy8293 124 A7E300::Rho GTPase-activating protein 7 ::Functions as a GTPase-activating protein specific for Rho and an activator of PLCD1 in vivo and induces morphological changes and detachment through cytoskeletal reorganization.::Bos taurus (taxid: 9913) confident no hit no match PF00620::RhoGAP 99.86::33-118 GO:0030675::Rac GTPase activator activity confident hh_3kuq_A_1::7-12,14-78,80-119 very confident psy9944 183 O94466::Probable Rho-GTPase-activating protein 7 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF00620::RhoGAP 100.00::2-140 GO:0030675::Rac GTPase activator activity confident hh_1tx4_A_1::2-31,33-36,39-76,79-140 very confident psy5716 294 P34288::GTPase-activating protein pac-1 ::GTPase-activating protein for members of the Rho subfamily including Rac1, RhoA and cdc42 and other Ras-related subfamilies including let-60. Mediates radial (inner-outer) polarity and gastrulation by excluding par-6 from contacted cell surfaces; acts by inactivating cdc42 at inner cell surfaces which limits active cdc42 to outer cell surfaces devoid of cell-cell contacts, where cdc42 can bind and recruit par-6.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00620::RhoGAP 99.96::141-287 GO:0030675::Rac GTPase activator activity confident hh_1tx4_A_1::132-182,187-224,226-288 very confident psy12161 342 Q5FWK3::Rho GTPase-activating protein 1 ::GTPase activator for the Rho, Rac and Cdc42 proteins, converting them to the putatively inactive GDP-bound state. Cdc42 seems to be the preferred substrate.::Mus musculus (taxid: 10090) confident no hit no match PF00620::RhoGAP 99.97::168-312 GO:0030675::Rac GTPase activator activity confident hh_1tx4_A_1::145-180,182-258,260-312,314-340 very confident psy14752 85 Q5SSM3::Rho GTPase-activating protein 44 ::GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. Acts as a GTPase activitor in vitro for CDC42 and RAC1.::Mus musculus (taxid: 10090) confident no hit no match PF00620::RhoGAP 99.80::5-77 GO:0030675::Rac GTPase activator activity confident hh_1tx4_A_1::4-41,44-79 very confident psy3002 240 Q80YF9::Rho GTPase-activating protein 33 ::May be involved in several stages of intracellular trafficking (By similarity). Could play an important role in the regulation of glucose transport by insulin. May act as a downstream effector of RHOQ/TC10 in the regulation of insulin-stimulated glucose transport.::Mus musculus (taxid: 10090) confident no hit no match PF00620::RhoGAP 99.97::59-201 GO:0030675::Rac GTPase activator activity confident hh_1tx4_A_1::27-51,59-98,103-137,139-201,206-230 very confident psy10137 625 Q9VTU3::Rho GTPase-activating protein 68F ::Functions as a GTPase-activating protein (GAP) for RhoA/Rho1 during gastrulation by converting it to an inactive GDP-bound state.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00620::RhoGAP 99.95::153-298 GO:0032319::regulation of Rho GTPase activity confident hh_3iug_A_1::130-168,170-333 very confident psy16474 264 Q5SSM3::Rho GTPase-activating protein 44 ::GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. Acts as a GTPase activitor in vitro for CDC42 and RAC1.::Mus musculus (taxid: 10090) portable no hit no match PF00620::RhoGAP 99.74::180-263 GO:0051056::regulation of small GTPase mediated signal transduction confident hh_1tx4_A_1::158-222,225-263 very confident psy17212 102 Q1LUS8::Ran-binding protein 10 ::May act as an adapter protein to couple membrane receptors to intracellular signaling pathways.::Danio rerio (taxid: 7955) very confident no hit no match PF00622::SPRY 97.83::41-101 GO:0005634::nucleus confident hh_3toj_A_1::5-18,24-38,41-101 very confident psy18207 293 Q9C026::E3 ubiquitin-protein ligase TRIM9 ::E3 ubiquitin-protein ligase which ubiquitinates itself in cooperation with an E2 enzyme UBE2D2/UBC4 and serves as a targeting signal for proteasomal degradation. May play a role in regulation of neuronal functions and may also participate in the formation or breakdown of abnormal inclusions in neurodegenerative disorders. May act as a regulator of synaptic vesicle exocytosis by controlling the availability of SNAP25 for the SNARE complex formation.::Homo sapiens (taxid: 9606) portable no hit no match PF00622::SPRY 99.78::170-282 GO:0005737::cytoplasm confident hh_3kb5_A_1::120-128,130-180,184-238,240-245,247-278 confident psy2942 117 Q9D5L7::SPRY domain-containing SOCS box protein 1 ::Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Mus musculus (taxid: 10090) confident no hit no match PF00622::SPRY 99.82::5-105 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2jk9_A_1::5-110 very confident psy4214 271 B4F739::F-box/SPRY domain-containing protein 1 ::::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00622::SPRY 99.51::125-231 GO:0042787::protein ubiquitination involved in ubiquitin-dependent protein catabolic process confident bp_2jk9_A_1::84-194 very confident psy18079 178 Q96DX4::RING finger and SPRY domain-containing protein 1 ::::Homo sapiens (taxid: 9606) confident no hit no match PF00622::SPRY 99.88::71-171 GO:0043234::protein complex confident hh_3toj_A_1::46-55,57-98,103-128,131-170 confident psy17782 256 Q6PJ21::SPRY domain-containing SOCS box protein 3 ::May be a substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Homo sapiens (taxid: 9606) portable no hit no match PF00622::SPRY 99.89::80-204 GO:0044763::single-organism cellular process confident hh_2jk9_A_1::37-54,56-65,67-181,184-206 very confident psy8037 292 Q8R5B6::SPRY domain-containing SOCS box protein 4 ::Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Mus musculus (taxid: 10090) very confident no hit no match PF00622::SPRY 99.90::98-231 GO:0046843::dorsal appendage formation confident hh_2jk9_A_1::35-235 very confident psy13831 82 Q07171::Gelsolin ::Calcium-regulated, actin-modulating protein that binds to the plus (or barbed) ends of actin monomers or filaments, preventing monomer exchange (end-blocking or capping). It can promote the assembly of monomers into filaments (nucleation) as well as sever filaments already formed.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00626::Gelsolin 99.43::3-66 GO:0051015::actin filament binding confident hh_1t44_G_1::3-81 very confident psy1385 69 Q9V9W8::Protein pygopus ::Involved in signal transduction through the Wnt pathway.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00628::PHD 97.95::43-69 GO:0005634::nucleus confident hh_2vpb_A_1::35-69 very confident psy192 898 Q9VEN1::Filamin-A ::Involved in the germline ring canal formation. May tether actin microfilament within the ovarian ring canal to the cell membrane. Contributes to actin microfilaments organization.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00630::Filamin 99.72::802-895 GO:0035182::female germline ring canal outer rim confident rp_2j3s_A_1::44-102,105-298 very confident psy5364 78 P21333::Filamin-A ::Promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. Anchors various transmembrane proteins to the actin cytoskeleton and serves as a scaffold for a wide range of cytoplasmic signaling proteins. Interaction with FLNA may allow neuroblast migration from the ventricular zone into the cortical plate. Tethers cell surface-localized furin, modulates its rate of internalization and directs its intracellular trafficking.::Homo sapiens (taxid: 9606) portable no hit no match PF00630::Filamin 98.79::32-77 GO:0048104::establishment of body hair or bristle planar orientation confident hh_2di9_A_1::5-48,50-77 very confident psy15078 70 P38040::Guanine nucleotide-binding protein subunit gamma-1 ::Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00631::G-gamma 99.87::6-70 GO:0005829::cytosol confident hh_1got_G_1::4-56,58-63 very confident psy10947 139 Q9NFZ3::Guanine nucleotide-binding protein subunit gamma-e ::Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. This subunit functions in visual transduction in the compound eye.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00631::G-gamma 99.77::77-139 GO:0016028::rhabdomere confident hh_1got_G_1::77-132 very confident psy11102 87 Q8BND3::WD repeat-containing protein 35 ::May promote CASP3 activation and TNF-stimulated apoptosis (By similarity). Required for ciliogenesis.::Mus musculus (taxid: 10090) portable no hit no match PF00637::Clathrin 97.28::17-83 GO:0042995::cell projection confident hh_2xpi_A_1::21-68 confident psy15915 99 P49951::Clathrin heavy chain 1 ::Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. Two different adapter protein complexes link the clathrin lattice either to the plasma membrane or to the trans-Golgi network.::Bos taurus (taxid: 9913) confident no hit no match PF00637::Clathrin 92.77::38-96 GO:0070062::extracellular vesicular exosome confident hh_1xi4_A_1::14-97 very confident psy3499 108 Q5RD33::Amyloid beta A4 precursor protein-binding family A member 2 ::Putative function in synaptic vesicle exocytosis by binding to STXBP1, an essential component of the synaptic vesicle exocytotic machinery. May modulate processing of the beta-amyloid precursor protein (APP) and hence formation of beta-APP.::Pongo abelii (taxid: 9601) portable no hit no match PF00640::PID 99.04::14-102 GO:0005886::plasma membrane very confident hh_4dbb_A_1::4-78,89-104 very confident psy3532 242 Q9DBR4::Amyloid beta A4 precursor protein-binding family B member 2 ::May modulate the internalization of beta-amyloid precursor protein.::Mus musculus (taxid: 10090) portable no hit no match PF00640::PID 99.95::127-242 GO:0006355::regulation of transcription, DNA-dependent confident hh_1wgu_A_1::113-182,185-242 very confident psy67 526 P16554::Protein numb ::Required in determination of cell fate during sensory organ formation in embryos. Functions in nuclei and seems to interact with nucleic acids.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00640::PID 99.95::168-313 GO:0016043::cellular component organization confident hh_3f0w_A_1::197-316 very confident psy368 320 Q9W0K0::JNK-interacting protein 1 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00640::PID 99.97::179-306 GO:0030425::dendrite confident no hit no match psy369 107 Q9W0K0::JNK-interacting protein 1 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00640::PID 99.09::38-91 GO:0030425::dendrite confident hh_3hqc_A_1::35-93 very confident psy3565 168 Q8IY57::YY1-associated factor 2 ::Binds to MYC and inhibits MYC-mediated transactivation. Also binds to MYCN and enhances MYCN-dependent transcriptional activation. Increases calpain 2-mediated proteolysis of YY1 in vitro. Component of the E2F6.com-1 complex, a repressive complex that methylates 'Lys-9' of histone H3, suggesting that it is involved in chromatin-remodeling.::Homo sapiens (taxid: 9606) very confident no hit no match PF00641::zf-RanBP 98.91::21-50 GO:0003714::transcription corepressor activity confident hh_3ixs_B_1::103-138 very confident psy10364 129 O16011::Protein muscleblind ::Required for terminal differentiation of photoreceptor cells. Vital for embryonic development.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00642::zf-CCCH 93.12::13-36 GO:0043229::intracellular organelle confident hh_3d2n_A_1::11-27,30-54 very confident psy15684 78 Q5ZKW9::Muscleblind-like protein 1 ::Involved in pre-mRNA alternative splicing regulation. Binds to CUG triplet repeat in RNA.::Gallus gallus (taxid: 9031) confident no hit no match PF00642::zf-CCCH 97.88::15-39 GO:0043484::regulation of RNA splicing confident hh_3d2n_A_1::8-71 very confident psy5396 291 Q8N5Y8::Mono [ADP-ribose] polymerase PARP16 ::::Homo sapiens (taxid: 9606) confident no hit no match PF00644::PARP 99.85::103-280 GO:0003950::NAD+ ADP-ribosyltransferase activity confident hh_4f0d_A_1::10-80,86-142,145-156,158-233,235-283 very confident psy8899 73 O95271::Tankyrase-1 ::Poly-ADP-ribosyltransferase involved in various processes such as Wnt signaling pathway, telomere length and vesicle trafficking. Acts as an activator of the Wnt signaling pathway by mediating poly-ADP-ribosylation of AXIN1 and AXIN2, 2 key components of the beta-catenin destruction complex: poly-ADP-ribosylated target proteins are recognized by RNF146, which mediates their ubiquitination and subsequent degradation. Also mediates poly-ADP-ribosylation of BLZF1 and CASC3, followed by recruitment of RNF146 and subsequent ubiquitination. Mediates poly-ADP-ribosylation of TERF1, thereby contributing to the regulation of telomere length. May also regulate vesicle trafficking and modulate the subcellular distribution of SLC2A4/GLUT4-vesicles.::Homo sapiens (taxid: 9606) confident no hit no match PF00644::PARP 99.75::2-63 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_3u9h_A_1::2-67 very confident psy14580 149 P97386::DNA ligase 3 ::The alpha isoform interacts with DNA-repair protein XRCC1 and can correct defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents. The beta isoform does not interact with XRCC1 and may be specifically involved in the completion of homologous recombination events that occur during meiotic prophase.::Mus musculus (taxid: 10090) portable no hit no match PF00645::zf-PARP 99.96::18-102 GO:0005654::nucleoplasm confident hh_1uw0_A_1::10-116,118-121 very confident psy6818 162 Q9R152::Poly [ADP-ribose] polymerase 1 ::Involved in the base excision repair (BER) pathway, by catalyzing the poly(ADP-ribosyl)ation of a limited number of acceptor proteins involved in chromatin architecture and in DNA metabolism. This modification follows DNA damages and appears as an obligatory step in a detection/signaling pathway leading to the reparation of DNA strand breaks. Mediates the poly(ADP-ribosyl)ation of APLF and CHFR. Positively regulates the transcription of MTUS1 and negatively regulates the transcription of MTUS2/TIP150. With EEF1A1 and TXK, forms a complex that acts as a T-helper 1 (Th1) cell-specific transcription factor and binds the promoter of IFN-gamma to directly regulate its transcription, and is thus involved importantly in Th1 cytokine production.::Cricetulus griseus (taxid: 10029) portable no hit no match PF00645::zf-PARP 99.94::52-135 GO:0050896::response to stimulus confident hh_4av1_A_1::1-85,87-136 very confident psy294 416 P27398::Calpain-D ::Calcium-regulated non-lysosomal thiol-protease.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00648::Peptidase_C2 99.72::49-133 GO:0007399::nervous system development confident hh_1qxp_A_1::48-106,108-235,244-268 very confident psy1431 1043 Q9R1S8::Calpain-7 ::Calcium-regulated non-lysosomal thiol-protease.::Mus musculus (taxid: 10090) confident no hit no match PF00648::Peptidase_C2 100.00::343-641 GO:0097264::self proteolysis confident hh_1qxp_A_1::335-378,380-409,415-420,422-428,431-460,462-510,512-516,523-541,545-597,599-611,618-656,659-665,667-676,681-697,704-704,706-776,780-818 very confident psy4447 261 Q9BTX7::Alpha-tocopherol transfer protein-like ::May act as a protein that binds a hydrophobic ligand.::Homo sapiens (taxid: 9606) portable no hit no match PF00650::CRAL_TRIO 100.00::48-202 GO:0005501::retinoid binding confident hh_1r5l_A_1::2-40,43-55,57-190,192-196,198-229 very confident psy13101 420 Q7PWB1::Protein real-time ::::Anopheles gambiae (taxid: 7165) confident no hit no match PF00650::CRAL_TRIO 99.97::201-364 GO:0005739::mitochondrion confident hh_1aua_A_1::48-130,195-283,285-338,340-343,346-378 very confident psy15467 241 Q5RCA6::Clavesin-1 ::Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Pongo abelii (taxid: 9601) portable no hit no match PF00650::CRAL_TRIO 99.96::33-190 GO:0005768::endosome confident hh_1r5l_A_1::3-43,47-74,80-179,181-211 very confident psy2054 75 Q5RCA6::Clavesin-1 ::Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Pongo abelii (taxid: 9601) portable no hit no match PF00650::CRAL_TRIO 99.73::1-75 GO:0005768::endosome confident hh_1r5l_A_1::1-75 very confident psy2694 262 Q5SPP0::Clavesin-2 ::Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Danio rerio (taxid: 7955) portable no hit no match PF00650::CRAL_TRIO 99.78::66-190 GO:0005768::endosome confident hh_1r5l_A_1::10-56,59-139,142-190 very confident psy14107 151 Q9BTX7::Alpha-tocopherol transfer protein-like ::May act as a protein that binds a hydrophobic ligand.::Homo sapiens (taxid: 9606) portable no hit no match PF00650::CRAL_TRIO 99.97::3-131 GO:0005768::endosome confident hh_1r5l_A_1::3-120,122-137 very confident psy14122 168 Q9BTX7::Alpha-tocopherol transfer protein-like ::May act as a protein that binds a hydrophobic ligand.::Homo sapiens (taxid: 9606) portable no hit no match PF00650::CRAL_TRIO 99.88::67-168 GO:0005768::endosome confident hh_3hx3_A_1::24-32,34-168 very confident psy5457 167 Q5RCA6::Clavesin-1 ::Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Pongo abelii (taxid: 9601) portable no hit no match PF00650::CRAL_TRIO 99.97::40-165 GO:0008289::lipid binding confident hh_1r5l_A_1::1-29,32-165 very confident psy8727 300 Q5SPP0::Clavesin-2 ::Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Danio rerio (taxid: 7955) portable no hit no match PF00650::CRAL_TRIO 99.97::111-256 GO:0008289::lipid binding confident hh_1r5l_A_1::31-54,56-91,93-101,104-247,249-276 very confident psy12585 146 Q9BTX7::Alpha-tocopherol transfer protein-like ::May act as a protein that binds a hydrophobic ligand.::Homo sapiens (taxid: 9606) portable no hit no match PF00650::CRAL_TRIO 99.81::13-87 GO:0008289::lipid binding confident hh_1r5l_A_1::7-76,78-114 very confident psy14126 81 Q5SPP0::Clavesin-2 ::Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Danio rerio (taxid: 7955) portable no hit no match PF00650::CRAL_TRIO 99.38::8-69 GO:0043231::intracellular membrane-bounded organelle confident hh_1r5l_A_1::8-58,60-80 very confident psy7195 134 Q10137::Sec14 cytosolic factor ::Has a direct role in controlling cell septation and in forespore membrane formation.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF00650::CRAL_TRIO 99.80::3-71 GO:0044424::intracellular part confident hh_1olm_A_1::4-45,49-106,110-134 very confident psy1331 157 Q10137::Sec14 cytosolic factor ::Has a direct role in controlling cell septation and in forespore membrane formation.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF00650::CRAL_TRIO 99.90::1-94 GO:0044424::intracellular part confident hh_1olm_A_1::1-9,11-68,72-129,133-157 very confident psy12483 233 Q10138::CRAL-TRIO domain-containing protein C3H8.02 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF00650::CRAL_TRIO 99.91::119-233 GO:0044444::cytoplasmic part confident hh_1aua_A_1::38-62,65-65,67-233 very confident psy12552 250 Q9BTX7::Alpha-tocopherol transfer protein-like ::May act as a protein that binds a hydrophobic ligand.::Homo sapiens (taxid: 9606) portable no hit no match PF00650::CRAL_TRIO 99.97::17-192 GO:0044444::cytoplasmic part confident hh_1r5l_A_1::13-42,44-84,111-181,183-219 very confident psy2055 86 Q5SPP0::Clavesin-2 ::Required for normal morphology of late endosomes and/or lysosomes in neurons. Binds phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2).::Danio rerio (taxid: 7955) confident no hit no match PF00650::CRAL_TRIO 99.74::2-76 GO:0080025::phosphatidylinositol-3,5-bisphosphate binding confident hh_1r5l_A_1::2-56,61-68,70-76 very confident psy16651 153 E1B932::Kelch-like protein 12 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a negative regulator of Wnt signaling pathway and ER-Golgi transport. The BCR(KLHL12) complex is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division: BCR(KLHL12) acts by mediating monoubiquitination of SEC31 (SEC31A or SEC31B). As part of the BCR(KLHL12) complex, also acts as a negative regulator of the Wnt signaling pathway by mediating ubiquitination and subsequent proteolysis of DVL3.::Bos taurus (taxid: 9913) portable no hit no match PF00651::BTB 99.81::23-145 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_2z8h_A_1::4-68,101-145 very confident psy2460 83 O61366::Serine-enriched protein ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00651::BTB 99.68::1-82 GO:0005634::nucleus confident hh_3hqi_A_1::1-19,22-82 very confident psy12678 80 Q24174::Protein abrupt ::Expression is vital for development; may be involved in transcriptional regulation. In embryos, muscle specific expression is required for segmental nerve b (SNb) motoneuron target recognition within ventral longitudinal muscles. Has a role in establishing and maintaining embryonic muscle attachments, adult sensory cell formation (macrochaetae) and morphogenesis of adult appendages (legs, antenna aristae and male external genitalia). Has a role in the morphogenesis of the class I dendritic neurons: selective expression of ab in class I da neurons plays a pivotal role in forming dendritic arbors, which are characteristic of the class I cells. The development of more complex arbors of class II-IV neurons depends on the absence of ab.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00651::BTB 99.31::27-69 GO:0007426::tracheal outgrowth, open tracheal system confident hh_3ga1_A_1::8-75 very confident psy14279 73 Q7KRI2::Longitudinals lacking protein-like ::Required, together with Trl, for maintaining the repressed state of target genes including homeotic genes Scr and Ubx. May also be involved in the activation of homeotic genes. Binds to a DNA Polycomb response element (PRE) at the bithorax complex. Also binds to polytene chromosomes at several hundred sites, many of which are shared with Trl and ph-p. Required during embryonic development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00651::BTB 99.53::4-70 GO:0007426::tracheal outgrowth, open tracheal system confident hh_2yy9_A_1::3-69 confident psy17360 115 Q7KRI2::Longitudinals lacking protein-like ::Required, together with Trl, for maintaining the repressed state of target genes including homeotic genes Scr and Ubx. May also be involved in the activation of homeotic genes. Binds to a DNA Polycomb response element (PRE) at the bithorax complex. Also binds to polytene chromosomes at several hundred sites, many of which are shared with Trl and ph-p. Required during embryonic development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00651::BTB 99.88::22-114 GO:0007426::tracheal outgrowth, open tracheal system confident hh_3ga1_A_1::3-64,68-114 very confident psy12546 765 Q5PQR3::BTB/POZ domain-containing protein 9 ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF00651::BTB 99.69::47-222 GO:0008344::adult locomotory behavior confident hh_3hve_A_1::33-108,175-188,192-304,315-347 very confident psy11353 76 O60662::Kelch repeat and BTB domain-containing protein 10 ::Required for pseudopod elongation in transformed cells. Substrate-specific adapter of an E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Homo sapiens (taxid: 9606) portable no hit no match PF00651::BTB 99.25::26-68 GO:0009605::response to external stimulus confident hh_2if5_A_1::13-68 very confident psy1854 110 Q5U374::Kelch-like protein 12 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a negative regulator of Wnt signaling pathway and ER-Golgi transport. The BCR(KLHL12) complex is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division (By similarity). Negatively regulates the Wnt signaling pathway, possibly via the targeted ubiquitination and subsequent proteolysis of dvl2 and dvl3. Regulates convergent-extension movements during early embryonic development.::Danio rerio (taxid: 7955) portable no hit no match PF00651::BTB 99.08::63-105 GO:0009605::response to external stimulus confident hh_2z8h_A_1::41-106 very confident psy6031 209 B1WAZ8::Zinc finger and BTB domain-containing protein 8A ::May be involved in transcriptional regulation.::Xenopus tropicalis (taxid: 8364) portable no hit no match PF00651::BTB 99.78::112-208 GO:0031463::Cul3-RING ubiquitin ligase complex confident hh_3hqi_A_1::104-208 very confident psy16232 176 P14083::Protein TKR ::Has a regulatory role during midline cell development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00651::BTB 99.71::6-97 GO:0043229::intracellular organelle confident hh_3ga1_A_1::4-47,50-97 very confident psy16238 123 P14083::Protein TKR ::Has a regulatory role during midline cell development.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00651::BTB 99.13::21-65 GO:0043229::intracellular organelle confident hh_3ohu_A_1::2-38,40-48,50-68 confident psy16401 94 Q5U374::Kelch-like protein 12 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin ligase complex that acts as a negative regulator of Wnt signaling pathway and ER-Golgi transport. The BCR(KLHL12) complex is involved in ER-Golgi transport by regulating the size of COPII coats, thereby playing a key role in collagen export, which is required for embryonic stem (ES) cells division (By similarity). Negatively regulates the Wnt signaling pathway, possibly via the targeted ubiquitination and subsequent proteolysis of dvl2 and dvl3. Regulates convergent-extension movements during early embryonic development.::Danio rerio (taxid: 7955) portable no hit no match PF00651::BTB 99.75::23-94 GO:0043234::protein complex confident hh_3hqi_A_1::15-94 very confident psy1847 86 Q8IN81::Sex determination protein fruitless ::Probably acts as a transcriptional regulator. Part of the somatic sex determination hierarchy; sex determination genes transformer (tra) and transformer-2 (tra-2) switch fru splicing from the male-specific pattern to the female-specific pattern through activation of the female-specific fru 5'-splice site. Vital for the development of males and females. Controls the development of the male specific abdominal muscle of Lawrence. Plays a role in male courtship behavior and sexual orientation. Enhances male-specific expression of takeout in brain-associated fat body.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00651::BTB 99.35::2-67 GO:0044428::nuclear part confident hh_2z8h_A_1::2-74 confident psy12932 107 Q9W0K4::Protein bric-a-brac 2 ::Probably acts as a transcriptional regulator. Required for the specification of the tarsal segment. Also involved in antenna development.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF00651::BTB 98.49::25-63 GO:0044428::nuclear part confident hh_2z8h_A_1::6-63 very confident psy5169 94 P59280::Kelch-like protein 8 ::::Mus musculus (taxid: 10090) portable no hit no match PF00651::BTB 99.79::20-93 GO:0048609::multicellular organismal reproductive process confident hh_3hqi_A_1::13-93 very confident psy11641 277 Q8MV48::N-acetylgalactosaminyltransferase 7 ::Glycopeptide transferase involved in O-linked oligosaccharide biosynthesis, which catalyzes the transfer of an N-acetyl-D-galactosamine residue to an already glycosylated peptide. In contrast to other proteins of the family, it does not act as a peptide transferase that transfers GalNAc onto serine or threonine residue on the protein receptor, but instead requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Some peptide transferase activity is however not excluded, considering that its appropriate peptide substrate may remain unidentified. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00652::Ricin_B_lectin 99.72::121-266 GO:0006493::protein O-linked glycosylation confident hh_2d7i_A_1::10-17,23-179,206-219,222-229,231-273 very confident psy16411 214 Q6UE39::Polypeptide N-acetylgalactosaminyltransferase 13 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. May be responsible for the synthesis of Tn antigen in neuronal cells.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00652::Ricin_B_lectin 92.38::187-212 GO:0009312::oligosaccharide biosynthetic process confident hh_1xhb_A_1::1-62,145-213 very confident psy16416 64 Q6WV17::Polypeptide N-acetylgalactosaminyltransferase 5 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers EA2 as substrate.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00652::Ricin_B_lectin 97.34::7-38 GO:0009312::oligosaccharide biosynthetic process confident hh_1xhb_A_1::1-39 very confident psy15024 130 Q6WV19::Polypeptide N-acetylgalactosaminyltransferase 2 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00652::Ricin_B_lectin 98.90::58-124 GO:0009312::oligosaccharide biosynthetic process confident hh_2ffu_A_1::1-124 very confident psy1795 96 Q95ZJ1::Polypeptide N-acetylgalactosaminyltransferase 5 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00652::Ricin_B_lectin 97.48::40-85 GO:0009312::oligosaccharide biosynthetic process confident hh_2ffu_A_1::2-44,48-49,52-84 very confident psy2280 162 Q9GLN5::Baculoviral IAP repeat-containing protein 5 ::Multitasking protein that has dual roles in promoting cell proliferation and preventing apoptosis. Component of a chromosome passage protein complex (CPC) which is essential for chromosome alignment and segregation during mitosis and cytokinesis. Acts as an important regulator of the localization of this complex; directs CPC movement to different locations from the inner centromere during prometaphase to midbody during cytokinesis and participates in the organization of the center spindle by associating with polymerized microtubules. The complex with RAN plays a role in mitotic spindle formation by serving as a physical scaffold to help deliver the RAN effector molecule TPX2 to microtubules. May counteract a default induction of apoptosis in G2/M phase. The acetylated form represses STAT3 transactivation of target gene promoters. May play a role in neoplasia. Inhibitor of CASP3 and CASP7.::Sus scrofa (taxid: 9823) confident no hit no match PF00653::BIR 99.93::40-105 GO:0043066::negative regulation of apoptotic process confident hh_2vm5_A_1::29-109,111-114 very confident psy13379 828 O88738::Baculoviral IAP repeat-containing protein 6 ::Anti-apoptotic protein which can regulate cell death by controlling caspases and by acting as an E3 ubiquitin-protein ligase. Has an unusual ubiquitin conjugation system in that it could combine in a single polypeptide, ubiquitin conjugating (E2) with ubiquitin ligase (E3) activity, forming a chimeric E2/E3 ubiquitin ligase. Its tragets include CASP9 and DIABLO/SMAC. Acts as an inhibitor of CASP3, CASP7 and CASP9. Important regulator for the final stages of cytokinesis. Crucial for normal vesicle targeting to the site of abscission, but also for the integrity of the midbody and the midbody ring, and its striking ubiquitin modification. Required for normal placenta development.::Mus musculus (taxid: 10090) portable no hit no match PF00653::BIR 99.74::347-419 GO:0044424::intracellular part confident hh_1g73_C_1::337-357,364-378,382-420 very confident psy3967 324 Q24306::Apoptosis 1 inhibitor ::Anti-apoptotic protein which functions as a caspase regulator, using its E3 ubiquitin-protein ligase activity to smother caspase activity. Binds, ubiquitinates and inactivates initator caspase Nc, and effector caspases ICE and DCP-1. Acts as a NEDD8-E3 ubiquitin-protein ligase for ICE. Suppresses apoptosis by targeting the apoptosome for ubiquitination and inactivation. Plays an important role in cell motility. Overexpression suppresses rpr and W-dependent cell death in the eye. Interaction of th with Nc is required to suppress Nc-mediated cell death; th-mediated ubiquitination of Nc. Acts as a positive regulator of Wnt signaling.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00653::BIR 99.87::178-243 GO:0050896::response to stimulus confident hh_3siq_A_1::15-48,50-70,77-123 very confident psy13939 86 P70677::Caspase-3 ::Involved in the activation cascade of caspases responsible for apoptosis execution. At the onset of apoptosis it proteolytically cleaves poly(ADP-ribose) polymerase (PARP) at a '216-Asp-|-Gly-217' bond. Cleaves and activates sterol regulatory element binding proteins (SREBPs) between the basic helix-loop-helix leucine zipper domain and the membrane attachment domain. Cleaves and activates caspase-6, -7 and -9. Triggers cell adhesion in sympathetic neurons through RET cleavage (By similarity). Cleaves IL-1 beta between an Asp and an Ala, releasing the mature cytokine which is involved in a variety of inflammatory processes.::Mus musculus (taxid: 10090) portable no hit no match PF00656::Peptidase_C14 98.03::12-67 GO:0012501::programmed cell death confident hh_3sir_A_1::10-86 very confident psy13940 88 Q3T0P5::Caspase-6 ::Involved in the activation cascade of caspases responsible for apoptosis execution. Cleaves poly(ADP-ribose) polymerase in vitro, as well as lamins. Overexpression promotes programmed cell death.::Bos taurus (taxid: 9913) portable no hit no match PF00656::Peptidase_C14 98.84::1-88 GO:0043234::protein complex confident hh_1m72_A_1::1-12,19-49,51-88 very confident psy14481 179 P61286::Polyadenylate-binding protein 1 ::Binds the poly(A) tail of mRNA. May be involved in cytoplasmic regulatory processes of mRNA metabolism such as pre-mRNA splicing. Its function in translational initiation regulation can either be enhanced by PAIP1 or repressed by PAIP2. Can probably bind to cytoplasmic RNA sequences other than poly(A) in vivo. Involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain. Involved in regulation of nonsense-mediated decay (NMD) of mRNAs containing premature stop codons; for the recognition of premature termination codons (PTC) and initiation of NMD a competitive interaction between UPF1 and PABPC1 with the ribosome-bound release factors is proposed.::Bos taurus (taxid: 9913) confident no hit no match PF00658::PABP 99.96::95-166 GO:0008143::poly(A) RNA binding very confident hh_1g9l_A_1::66-174 very confident psy12139 65 no hit no match no hit no match PF00658::PABP 99.18::1-31 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_2dyd_A_1::1-37 very confident psy11795 313 P35555::Fibrillin-1 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) portable no hit no match PF00683::TB 98.68::276-312 GO:0005578::proteinaceous extracellular matrix confident hh_2w86_A_2::39-50,54-54,56-68,93-151,153-200 very confident psy6366 101 Q8IZT8::Heparan sulfate glucosamine 3-O-sulfotransferase 5 ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfo group to position 3 of glucosamine residues in heparan. Catalyzes the rate limiting step in the biosynthesis of heparan sulfate (HSact). This modification is a crucial step in the biosynthesis of anticoagulant heparan sulfate as it completes the structure of the antithrombin pentasaccharide binding site. Also generates GlcUA-GlcNS or IdoUA-GlcNS and IdoUA2S-GlcNH2. The substrate-specific O-sulfation generates an enzyme-modified heparan sulfate which acts as a binding receptor to Herpes simplex virus-1 (HSV-1) and permits its entry.::Homo sapiens (taxid: 9606) confident no hit no match PF00685::Sulfotransfer_1 98.35::2-92 GO:0006024::glycosaminoglycan biosynthetic process confident hh_3bd9_A_1::1-92 very confident psy9932 80 Q9ESG5::Heparan sulfate glucosamine 3-O-sulfotransferase 1 ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfo group to position 3 of glucosamine residues in heparan. Catalyzes the rate limiting step in the biosynthesis of heparan sulfate (HSact). This modification is a crucial step in the biosynthesis of anticoagulant heparan sulfate as it completes the structure of the antithrombin pentasaccharide binding site.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00685::Sulfotransfer_1 98.29::2-37 GO:0006477::protein sulfation confident hh_3uan_A_1::1-80 very confident psy10675 233 Q9ESG5::Heparan sulfate glucosamine 3-O-sulfotransferase 1 ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfo group to position 3 of glucosamine residues in heparan. Catalyzes the rate limiting step in the biosynthesis of heparan sulfate (HSact). This modification is a crucial step in the biosynthesis of anticoagulant heparan sulfate as it completes the structure of the antithrombin pentasaccharide binding site.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00685::Sulfotransfer_1 99.47::2-178 GO:0008152::metabolic process confident hh_3bd9_A_1::2-32,34-72,89-190 very confident psy10121 548 O75897::Sulfotransferase 1C4 ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of drugs, xenobiotic compounds, hormones, and neurotransmitters. May be involved in the activation of carcinogenic hyroxylamines. Shows activity towards p-nitrophenol and N-hydroxy-2-acetylamino-fluorene (N-OH-2AAF).::Homo sapiens (taxid: 9606) portable no hit no match PF00685::Sulfotransfer_1 100.00::416-545 GO:0043229::intracellular organelle confident hh_3bfx_A_1::36-113,167-199,202-243,415-430,432-495,501-506,509-548 very confident psy10122 330 P50226::Sulfotransferase 1A2 ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of catecholamines, phenolic drugs and neurotransmitters. Is also responsible for the sulfonation and activation of minoxidil. Mediates the metabolic activation of carcinogenic N-hydroxyarylamines to DNA binding products and could so participate as modulating factor of cancer risk.::Homo sapiens (taxid: 9606) portable no hit no match PF00685::Sulfotransfer_1 99.91::57-233 GO:0043229::intracellular organelle confident hh_3bfx_A_1::58-116,119-181,187-193,197-235,237-240 very confident psy10120 510 Q9WUW9::Sulfotransferase 1C2A ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of drugs, xenobiotic compounds, hormones, and neurotransmitters.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00685::Sulfotransfer_1 100.00::234-465 GO:0043229::intracellular organelle confident hh_3bfx_A_1::101-171,173-175,181-182,210-220,231-267,296-319,322-418,424-471 very confident psy5431 271 P49887::Estrogen sulfotransferase ::Sulfotransferase that utilizes 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of estradiol and estrone. May play a role in the regulation of estrogen receptor activity by metabolizing free estradiol.::Cavia porcellus (taxid: 10141) confident no hit no match PF00685::Sulfotransfer_1 100.00::1-259 GO:0051923::sulfation confident hh_3bfx_A_1::1-41,54-145,147-211,217-217,220-263 very confident psy17267 465 P63046::Sulfotransferase 4A1 ::Atypical sulfotransferase family member with very low affinity for 3'-phospho-5'-adenylyl sulfate (PAPS) and very low catalytic activity towards L-triiodothyronine, thyroxine, estrone, p-nitrophenol, 2-naphthylamine, and 2-beta-naphthol. May have a role in the metabolism of drugs and neurotransmitters in the CNS.::Mus musculus (taxid: 10090) portable no hit no match PF00685::Sulfotransfer_1 100.00::62-460 GO:0051923::sulfation confident hh_3bfx_A_1::29-37,40-112,138-197,283-334,339-345,379-420,422-464 very confident psy10123 123 no hit no match no hit no match PF00685::Sulfotransfer_1 99.46::1-95 GO:0051923::sulfation confident hh_2zpt_X_1::1-51,57-64,68-93,98-104 very confident psy15991 393 P18075::Bone morphogenetic protein 7 ::Induces cartilage and bone formation. May be the osteoinductive factor responsible for the phenomenon of epithelial osteogenesis. Plays a role in calcium regulation and bone homeostasis.::Homo sapiens (taxid: 9606) confident no hit no match PF00688::TGFb_propeptide 99.97::36-257 GO:0050896::response to stimulus confident hh_1zkz_A_1::310-369,376-391 very confident psy16569 385 Q9VLS1::Probable phosphorylase b kinase regulatory subunit beta ::Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. The beta chain acts as a regulatory unit and modulates the activity of the holoenzyme in response to phosphorylation.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00723::Glyco_hydro_15 97.28::26-125 GO:0004689::phosphorylase kinase activity confident rp_1vt4_I_1::73-82,86-110,113-135,140-156,158-165,173-195,197-205,211-224,230-244,249-251,254-270,274-282,287-335,341-372,376-382 portable psy14913 166 P49326::Dimethylaniline monooxygenase [N-oxide-forming] 5 ::In contrast with other forms of FMO it does not seem to be a drug-metabolizing enzyme.::Homo sapiens (taxid: 9606) portable no hit no match PF00743::FMO-like 100.00::1-162 GO:0004497::monooxygenase activity confident hh_2gv8_A_1::1-86,89-113,115-117 very confident psy17102 412 Q5UU75::Doublesex- and mab-3-related transcription factor A2 ::May be involved in sexual development.::Danio rerio (taxid: 7955) confident no hit no match PF00751::DM 99.87::55-101 GO:0006355::regulation of transcription, DNA-dependent confident hh_1lpv_A_1::55-101 very confident psy11954 881 Q923L3::CUB and sushi domain-containing protein 1 ::::Mus musculus (taxid: 10090) portable no hit no match PF00754::F5_F8_type_C 99.13::28-185 GO:0005615::extracellular space confident hh_1ntl_A_1::467-500,502-524,543-560,621-723,746-778,784-866 very confident psy4861 101 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable no hit no match PF00754::F5_F8_type_C 99.00::18-85 GO:0018108::peptidyl-tyrosine phosphorylation confident hh_4ag4_A_1::4-75,77-98 very confident psy16320 214 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable no hit no match PF00754::F5_F8_type_C 98.72::113-208 GO:0018108::peptidyl-tyrosine phosphorylation confident hh_4ag4_A_1::9-46,53-110,112-213 very confident psy17120 137 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable no hit no match PF00754::F5_F8_type_C 99.14::58-131 GO:0018108::peptidyl-tyrosine phosphorylation confident hh_4ag4_A_1::1-25,27-32,57-122,124-136 very confident psy6330 123 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable no hit no match PF00754::F5_F8_type_C 99.51::17-118 GO:0050896::response to stimulus confident hh_4ag4_A_1::5-74,76-110,112-118 very confident psy17649 457 P11466::Peroxisomal carnitine O-octanoyltransferase ::Beta-oxidation of fatty acids. The highest activity concerns the C6 to C10 chain length substrate.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00755::Carn_acyltransf 100.00::44-457 GO:0006635::fatty acid beta-oxidation confident hh_2deb_A_1::29-112,114-129,133-171,173-205,213-235,237-282,285-457 very confident psy4825 122 P07668::Choline O-acetyltransferase ::Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00755::Carn_acyltransf 100.00::1-109 GO:0016406::carnitine O-acyltransferase activity confident hh_1nm8_A_1::1-115 very confident psy934 143 Q03059::Choline O-acetyltransferase ::Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.::Mus musculus (taxid: 10090) portable no hit no match PF00755::Carn_acyltransf 100.00::2-130 GO:0044699::single-organism process confident hh_1t1u_A_1::2-61,65-135 very confident psy7502 87 P28329::Choline O-acetyltransferase ::Catalyzes the reversible synthesis of acetylcholine (ACh) from acetyl CoA and choline at cholinergic synapses.::Homo sapiens (taxid: 9606) portable no hit no match PF00755::Carn_acyltransf 99.87::1-81 GO:0044710::single-organism metabolic process confident hh_1nm8_A_1::1-77,79-82 very confident psy10681 67 P32198::Carnitine O-palmitoyltransferase 1, liver isoform ::::Rattus norvegicus (taxid: 10116) portable no hit no match PF00755::Carn_acyltransf 99.89::1-65 GO:0051260::protein homooligomerization confident hh_1nm8_A_1::1-65 very confident psy1224 81 P46662::Merlin ::Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with WWC1 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. May act as a membrane stabilizing protein. May inhibit PI3 kinase by binding to AGAP2 and impairing its stimulating activity. Suppresses cell proliferation and tumorigenesis by inhibiting the CUL4A-RBX1-DDB1-VprBP/DCAF1 E3 ubiquitin-protein ligase complex (By similarity). Plays a role in lens development and is required for complete fiber cell terminal differentiation, maintenance of cell polarity and separation of the lens vesicle from the corneal epithelium.::Mus musculus (taxid: 10090) confident no hit no match PF00769::ERM 100.00::7-77 GO:0014010::Schwann cell proliferation confident hh_1ef1_C_1::4-77 very confident psy1232 67 P46662::Merlin ::Probable regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in tumor suppression by restricting proliferation and promoting apoptosis. Along with WWC1 can synergistically induce the phosphorylation of LATS1 and LATS2 and can probably function in the regulation of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway. May act as a membrane stabilizing protein. May inhibit PI3 kinase by binding to AGAP2 and impairing its stimulating activity. Suppresses cell proliferation and tumorigenesis by inhibiting the CUL4A-RBX1-DDB1-VprBP/DCAF1 E3 ubiquitin-protein ligase complex (By similarity). Plays a role in lens development and is required for complete fiber cell terminal differentiation, maintenance of cell polarity and separation of the lens vesicle from the corneal epithelium.::Mus musculus (taxid: 10090) confident no hit no match PF00769::ERM 99.93::9-66 GO:0014010::Schwann cell proliferation confident hh_2i1j_A_1::5-8,10-66 very confident psy3984 183 P46150::Moesin/ezrin/radixin homolog 1 ::Involved in connections of major cytoskeletal structures to the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00769::ERM 100.00::2-183 GO:0051286::cell tip confident hh_2i1j_A_1::1-59,63-88,90-183 very confident psy1026 107 O14640::Segment polarity protein dishevelled homolog DVL-1 ::Participates in Wnt signaling by binding to the cytoplasmic C-terminus of frizzled family members and transducing the Wnt signal to down-stream effectors. Plays a role both in canonical and non-canonical Wnt signaling. Plays a role in the signal transduction pathways mediated by multiple Wnt genes. Required for LEF1 activation upon WNT1 and WNT3A signaling. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ).::Homo sapiens (taxid: 9606) confident no hit no match PF00778::DIX 100.00::1-82 GO:0045893::positive regulation of transcription, DNA-dependent confident hh_3pz8_A_1::1-97 very confident psy3226 111 Q9V407::Axin ::Inhibitor of the WG signaling pathway. Down-regulates beta-catenin (armadillo=ARM). Probably facilitate the phosphorylation of beta-catenin and APC by GSK3B (zeste-white 3=ZW3).::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00778::DIX 100.00::23-104 GO:0060071::Wnt receptor signaling pathway, planar cell polarity pathway confident hh_1wsp_A_1::22-104 very confident psy13312 67 no hit no match no hit no match PF00780::CNH 96.89::15-64 GO:0006915::apoptotic process confident no hit no match psy8906 180 Q9U1M8::Myosin-I heavy chain ::Myosins are actin-based motor molecules with ATPase activity. Involved in the early steps of phagocytosis and adhesion.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF00784::MyTH4 100.00::1-106 GO:0030175::filopodium confident hh_3au4_A_1::1-51,53-87,91-162 very confident psy8450 525 Q9UKN7::Unconventional myosin-XV ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments. Required for the arrangement of stereocilia in mature hair bundles.::Homo sapiens (taxid: 9606) portable no hit no match PF00784::MyTH4 99.98::106-215 GO:0043025::neuronal cell body confident hh_3pvl_A_1::10-32,55-55,63-175,183-224,226-259,263-274,276-339,348-386,388-458,460-488,492-521 very confident psy12129 154 Q9VNE7::CDC42 small effector protein homolog ::Probably involved in the organization of the actin cytoskeleton by acting downstream of CDC42, inducing actin filament assembly.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00786::PBD 98.13::54-75 GO:0005730::nucleolus confident hh_1cee_B_1::47-69,71-85 confident psy13110 183 Q08E52::Serine/threonine-protein kinase PAK 1 ::The activated kinase acts on a variety of targets. Likely to be the GTPase effector that links the Rho-related GTPases to the JNK MAP kinase pathway. Activated by CDC42 and RAC1. Involved in dissolution of stress fibers and reorganization of focal complexes. Involved in regulation of microtubule biogenesis through phosphorylation of TBCB. DVL1 and PAK1 form a ternary complex with MUSK which is important for MUSK-dependent regulation of AChR clustering during the formation of the neuromuscular junction (NMJ). Activity is inhibited in cells undergoing apoptosis, potentially due to binding of CDC2L1 and CDC2L2 (By similarity). Phosphorylates MYL9/MLC2. Phosphorylates RAF1 at 'Ser-338' and 'Ser-339' resulting in: activation of RAF1, stimulation of RAF1 translocation to mitochondria, phosphorylation of BAD by RAF1, and RAF1 binding to BCL2.::Bos taurus (taxid: 9913) confident no hit no match PF00786::PBD 99.87::107-165 GO:0007155::cell adhesion confident hh_1f3m_A_1::104-169,171-181 very confident psy8537 102 Q8CJ96::Ras association domain-containing protein 8 ::::Mus musculus (taxid: 10090) confident no hit no match PF00788::RA 99.22::2-70 GO:0005912::adherens junction confident hh_2cs4_A_1::1-62,66-80 very confident psy5451 197 O35889::Afadin ::Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00788::RA 99.76::92-185 GO:0005938::cell cortex confident hh_3ddc_B_1::12-30,44-45,48-48,52-66,73-98,100-101,105-134,138-183 very confident psy5450 133 O35889::Afadin ::Belongs to an adhesion system, probably together with the E-cadherin-catenin system, which plays a role in the organization of homotypic, interneuronal and heterotypic cell-cell adherens junctions (AJs). Nectin- and actin-filament-binding protein that connects nectin to the actin cytoskeleton. May play a key role in the organization of epithelial structures of the embryonic ectoderm.::Rattus norvegicus (taxid: 10116) portable no hit no match PF00788::RA 99.84::26-132 GO:0005938::cell cortex confident hh_1wxa_A_1::19-82,84-88,90-91,99-132 very confident psy12750 93 Q9NZ52::ADP-ribosylation factor-binding protein GGA3 ::Plays a role in protein sorting and trafficking between the trans-Golgi network (TGN) and endosomes. Mediates the ARF-dependent recruitment of clathrin to the TGN and binds ubiquitinated proteins and membrane cargo molecules with a cytosolic acidic cluster-dileucine (AC-LL) motif.::Homo sapiens (taxid: 9606) confident no hit no match PF00790::VHS 99.96::3-87 GO:0005802::trans-Golgi network confident hh_3g2s_A_1::3-90 very confident psy6184 156 Q0V8S0::Hepatocyte growth factor-regulated tyrosine kinase substrate ::Involved in intracellular signal transduction mediated by cytokines and growth factors. When associated with STAM it suppresses DNA signaling upon stimulation by IL-2 and GM-CSF. Could be a direct effector of PI3-kinase in vesicular pathway via early endosomes and may regulate trafficking to early and late endosomes by recruiting clathrin. May concentrate ubiquitinated receptors within clathrin-coated regions. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with STAM (ESCRT-0 complex). The ESCRT-0 complex binds ubiquitin and acts as sorting machinery that recognizes ubiquitinated receptors and transfers them to further sequential lysosomal sorting/trafficking processes. May contribute to the efficient recruitment of SMADs to the activin receptor complex. Involved in receptor recycling via its association with the CART complex, a multiprotein complex required for efficient transferrin receptor recycling but not for EGFR degradation.::Bos taurus (taxid: 9913) confident no hit no match PF00790::VHS 100.00::7-106 GO:0005829::cytosol confident hh_3zyq_A_1::6-136 very confident psy3857 349 Q5SRX1::TOM1-like protein 2 ::Probable role in protein transport. May regulate growth factor-induced mitogenic signaling.::Mus musculus (taxid: 10090) confident no hit no match PF00790::VHS 100.00::12-152 GO:0005829::cytosol confident hh_1elk_A_1::2-7,10-64,67-157 very confident psy5121 204 Q8C8R3::Ankyrin-2 ::Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.::Mus musculus (taxid: 10090) portable no hit no match PF00791::ZU5 95.78::98-169 GO:0005886::plasma membrane confident hh_4d8o_A_1::40-137,144-170 very confident psy4885 187 Q01484::Ankyrin-2 ::Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.::Homo sapiens (taxid: 9606) confident no hit no match PF00791::ZU5 99.08::2-50 GO:0016328::lateral plasma membrane confident hh_4d8o_A_1::1-71,74-165,175-187 very confident psy2358 417 Q12955::Ankyrin-3 ::Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.::Homo sapiens (taxid: 9606) confident no hit no match PF00791::ZU5 92.99::25-59 GO:0030507::spectrin binding confident hh_4d8o_A_1::7-59,69-256,270-292 very confident psy4205 315 P36975::Synaptosomal-associated protein 25 ::May play an important role in the synaptic function of specific neuronal systems. Associates with proteins involved in vesicle docking and membrane fusion.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00835::SNAP-25 99.39::194-244 GO:0048172::regulation of short-term neuronal synaptic plasticity confident hh_1sfc_D_2::226-293 very confident psy9760 133 Q5R8C6::Stathmin-3 ::Exhibits microtubule-destabilizing activity, which is antagonized by STAT3.::Pongo abelii (taxid: 9601) portable no hit no match PF00836::Stathmin 100.00::6-131 GO:0051272::positive regulation of cellular component movement confident hh_3ryc_E_1::5-127 very confident psy11128 212 Q9VGS2::Translationally-controlled tumor protein homolog ::Involved in calcium binding and microtubule stabilization.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00838::TCTP 100.00::5-151 GO:0005088::Ras guanyl-nucleotide exchange factor activity confident hh_1yz1_A_1::8-61,63-64,66-120,123-133,137-154 very confident psy8245 629 Q62638::Golgi apparatus protein 1 ::Binds fibroblast growth factor. Binds E-selectin (cell-adhesion lectin on endothelial cells mediating the binding of neutrophils).::Rattus norvegicus (taxid: 10116) portable no hit no match PF00839::Cys_rich_FGFR 99.22::255-313 GO:0044431::Golgi apparatus part confident rp_1vt4_I_1::17-52,54-102,108-113,117-123,129-142,145-169,173-182,184-194,203-207,217-225,233-252,260-273,277-278,281-286,290-295,297-312,317-331,335-352,356-383 portable psy13980 532 Q62638::Golgi apparatus protein 1 ::Binds fibroblast growth factor. Binds E-selectin (cell-adhesion lectin on endothelial cells mediating the binding of neutrophils).::Rattus norvegicus (taxid: 10116) portable no hit no match PF00839::Cys_rich_FGFR 99.30::394-449 GO:0044431::Golgi apparatus part confident rp_1vt4_I_1::3-9,13-42,44-48,55-62,70-74,79-104,111-116,118-126,128-160,163-174,184-192,206-223,238-243,251-253,256-316,337-339,343-405,409-434,438-450,453-468,473-488 portable psy5439 381 Q9VUL9::Glycoprotein 3-alpha-L-fucosyltransferase A ::Catalyzes alpha-1,3 glycosidic linkages.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00852::Glyco_transf_10 100.00::91-368 GO:0046920::alpha-(1->3)-fucosyltransferase activity confident hh_2nzw_A_1::91-101,104-209,211-240,242-271,273-287,290-369 very confident psy13769 155 Q63046::Runt-related transcription factor 1 ::CBF binds to the core site, 5'-PYGPYGGT-3', of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL-3 and GM-CSF promoters. The alpha subunit binds DNA and appears to have a role in the development of normal hematopoiesis. Inhibits KAT6B-dependent transcriptional activation.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00853::Runt 100.00::23-155 GO:0005509::calcium ion binding confident hh_1eaq_A_1::23-155 very confident psy3060 268 Q25520::Segmentation protein Runt (Fragment) ::Plays a pivotal role in regulating the expression of other pair-rule genes such as eve, ftz, and h. Plays a role in the developmental pathways of sex determination and neurogenesis.::Manduca sexta (taxid: 7130) portable no hit no match PF00853::Runt 100.00::22-141 GO:0005524::ATP binding confident hh_1eaq_A_1::21-144 very confident psy9229 258 Q63046::Runt-related transcription factor 1 ::CBF binds to the core site, 5'-PYGPYGGT-3', of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL-3 and GM-CSF promoters. The alpha subunit binds DNA and appears to have a role in the development of normal hematopoiesis. Inhibits KAT6B-dependent transcriptional activation.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00853::Runt 100.00::74-208 GO:0005730::nucleolus very confident hh_1eaq_A_1::73-209 very confident psy17338 130 Q63046::Runt-related transcription factor 1 ::CBF binds to the core site, 5'-PYGPYGGT-3', of a number of enhancers and promoters, including murine leukemia virus, polyomavirus enhancer, T-cell receptor enhancers, LCK, IL-3 and GM-CSF promoters. The alpha subunit binds DNA and appears to have a role in the development of normal hematopoiesis. Inhibits KAT6B-dependent transcriptional activation.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00853::Runt 100.00::22-125 GO:0005730::nucleolus very confident hh_1eaq_A_1::21-125 very confident psy5299 75 Q86TU7::Histone-lysine N-methyltransferase setd3 ::Histone methyltransferase that methylates 'Lys-36' of histone H3 (H3K36me). H3 'Lys-36' methylation represents a specific tag for epigenetic transcriptional activation.::Homo sapiens (taxid: 9606) confident no hit no match PF00856::SET 98.43::15-59 GO:0018026::peptidyl-lysine monomethylation confident hh_3smt_A_1::1-59 very confident psy7317 919 O04492::Double-stranded RNA-binding protein 1 ::Double-stranded RNA-binding protein involved in RNA-mediated post-transcriptional gene silencing (PTGS). Functions in the microRNAs (miRNAs) biogenesis by assisting DICER-LIKE 1 (DCL1) in the accurate processing from primary miRNAs (pri-miRNAs) to miRNAs in the nucleus. Forms a complex with SERRATE (SE) and DCL1 to promote accurate processing of pri-miRNAs by DCL1. Binds and assist DCL1 for accurate processing of precursor miRNAs (pre-miRNA). Indirectly involved in the production of trans-acting small interfering RNAs (ta-siRNAs) derived from the TAS1, TAS2 or TAS3 endogenous transcripts by participating in the production of their initiating miRNAs. Involved with argonaute 1 (AGO1) in the guide strand selection from miRNA duplexes, presumably by directional loading of the miRNA duplex (guide stand and passenger strand) onto the RNA-induced silencing complex (RISC) for passenger strand degradation. Does not participate in sense transgene-induced post-transcriptional gene silencing (S-PTGS). Involved in several plant development aspects and response to hormones through its role in miRNAs processing.::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF00858::ASC 99.96::715-893 GO:0005737::cytoplasm confident hh_2qts_A_1::714-720,725-765,767-794,796-811,813-898 very confident psy14662 237 Q9H3D4::Tumor protein 63 ::Acts as a sequence specific DNA binding transcriptional activator or repressor. The isoforms contain a varying set of transactivation and auto-regulating transactivation inhibiting domains thus showing an isoform specific activity. Isoform 2 activates RIPK4 transcription. May be required in conjunction with TP73/p73 for initiation of p53/TP53 dependent apoptosis in response to genotoxic insults and the presence of activated oncogenes. Involved in Notch signaling by probably inducing JAG1 and JAG2. Plays a role in the regulation of epithelial morphogenesis. The ratio of DeltaN-type and TA*-type isoforms may govern the maintenance of epithelial stem cell compartments and regulate the initiation of epithelial stratification from the undifferentiated embryonal ectoderm. Required for limb formation from the apical ectodermal ridge. Activates transcription of the p21 promoter.::Homo sapiens (taxid: 9606) portable no hit no match PF00870::P53 100.00::22-237 GO:0043234::protein complex confident hh_2rmn_A_1::20-40,42-74,81-82,113-140,144-237 very confident psy4810 434 Q9VAS7::Innexin inx3 ::Structural components of the gap junctions.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00876::Innexin 100.00::22-391 GO:0005886::plasma membrane confident no hit no match psy6812 207 P27716::Innexin inx1 ::Structural component of the gap junctions. Essential for generation and/or maintenance of postembryonic neuroblasts and normal development of optic lobe.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00876::Innexin 100.00::20-176 GO:0005921::gap junction confident no hit no match psy6816 273 P27716::Innexin inx1 ::Structural component of the gap junctions. Essential for generation and/or maintenance of postembryonic neuroblasts and normal development of optic lobe.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00876::Innexin 100.00::7-268 GO:0005921::gap junction confident no hit no match psy15178 103 P33085::Innexin shaking-B ::Structural component of the gap junctions at electrical synapses in distal and mid-depth levels in the lamina. Isoform Lethal forms voltage sensitive intercellular channels through homotypic interactions.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00876::Innexin 100.00::1-100 GO:0005921::gap junction confident no hit no match psy10822 257 Q7PXN1::Innexin shaking-B ::Structural component of the gap junctions at electrical synapses in distal and mid-depth levels in the lamina.::Anopheles gambiae (taxid: 7165) very confident no hit no match PF00876::Innexin 100.00::2-248 GO:0005921::gap junction confident no hit no match psy6815 263 Q9V427::Innexin inx2 ::Structural components of the gap junctions.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00876::Innexin 100.00::2-263 GO:0005921::gap junction very confident no hit no match psy8408 393 Q9VAS7::Innexin inx3 ::Structural components of the gap junctions.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00876::Innexin 100.00::26-363 GO:0005921::gap junction confident rp_1vt4_I_1::17-28,32-42,44-89,96-124,127-129,137-196,202-231,234-276 portable psy6913 380 Q9V427::Innexin inx2 ::Structural components of the gap junctions.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF00876::Innexin 100.00::20-377 GO:0010496::intercellular transport very confident no hit no match psy7380 72 Q9ES03::T-box transcription factor TBX20 ::Probable transcriptional regulator involved in developmental processes.::Mus musculus (taxid: 10090) confident no hit no match PF00907::T-box 98.73::9-32 GO:0000977::RNA polymerase II regulatory region sequence-specific DNA binding confident hh_2x6u_A_1::10-35 confident psy16661 190 P70324::T-box transcription factor TBX3 ::Transcriptional repressor involved in developmental processes. Probably plays a role in limb pattern formation.::Mus musculus (taxid: 10090) confident no hit no match PF00907::T-box 100.00::45-186 GO:0042733::embryonic digit morphogenesis confident hh_1h6f_A_1::42-62,69-183 very confident psy7373 95 P90971::T-box protein 12 ::Involved in cell fate determination; required to pattern the posterior hindgut.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00907::T-box 100.00::2-95 GO:0042803::protein homodimerization activity confident hh_1h6f_A_1::2-59,66-95 very confident psy434 307 Q3SA49::T-box transcription factor TBX1 ::::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00907::T-box 100.00::51-252 GO:0042803::protein homodimerization activity confident hh_1h6f_A_1::38-47,53-78,80-80,88-94,99-105,115-126,129-206,209-256 very confident psy9258 163 P70327::T-box transcription factor TBX6 ::T-box transcription factor that plays an essential role in the determination of the fate of axial stem cells: neural vs mesodermal. Acts in part by downregulating, a specific enhancer (N1) of SOX2, to inhibit neural development. Seems to plays also an essential role in left/right axis determination and acts through effects on Notch signaling around the node as well as through an effect on the morphology and motility of the nodal cilia.::Mus musculus (taxid: 10090) portable no hit no match PF00907::T-box 100.00::1-162 GO:0043234::protein complex confident hh_1h6f_A_1::1-56,60-121,124-128,130-162 very confident psy14943 328 P79778::T-box-containing protein TBXT ::May be involved in the initial formation of the chordamesoderm.::Gallus gallus (taxid: 9031) confident no hit no match PF00907::T-box 100.00::53-240 GO:0043234::protein complex confident hh_1xbr_A_1::51-207,219-244 very confident psy9266 157 Q861Q9::T-box transcription factor TBX4 ::Involved in the transcriptional regulation of genes required for mesoderm differentiation. Probably plays a role in limb pattern formation.::Canis familiaris (taxid: 9615) portable no hit no match PF00907::T-box 100.00::13-156 GO:0043234::protein complex confident hh_2x6u_A_1::8-39,47-96,100-156 very confident psy9084 103 no hit no match no hit no match PF00907::T-box 99.98::5-102 GO:0045892::negative regulation of transcription, DNA-dependent confident hh_4a04_A_1::4-10,12-103 very confident psy17633 99 Q3SA46::T-box transcription factor TBX20 ::Probable transcriptional regulator involved in developmental processes.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF00907::T-box 100.00::1-98 GO:0045944::positive regulation of transcription from RNA polymerase II promoter very confident hh_1h6f_A_1::1-43,46-99 very confident psy7364 73 Q8UW76::T-box transcription factor TBX20 ::Probable transcriptional regulator involved in developmental processes.::Gallus gallus (taxid: 9031) confident no hit no match PF00907::T-box 99.95::1-66 GO:0045944::positive regulation of transcription from RNA polymerase II promoter very confident hh_2x6u_A_1::1-19,22-69 very confident psy10763 90 Q0VCW1::Speckle-type POZ protein ::Inhibits IPF1/PDX1 transactivation of established target promoters, such as insulin, may be by recruiting a repressor complex. In complex with CUL3, involved in ubiquitination of BMI1, DAXX and H2AFY, and probably also in ubiquitination and proteasomal degradation of Gli2 or Gli3.::Bos taurus (taxid: 9913) very confident no hit no match PF00917::MATH 98.30::10-51 GO:0031463::Cul3-RING ubiquitin ligase complex very confident hh_3ivv_A_1::8-54 very confident psy17618 164 P53678::AP-3 complex subunit mu-2 ::Component of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. Ap47 is a subunit of the plasma membrane adaptor.::Rattus norvegicus (taxid: 10116) confident no hit no match PF00928::Adap_comp_sub 100.00::18-154 GO:0005829::cytosol confident hh_3l81_A_1::10-23,26-121,123-153 very confident psy17767 64 P84091::AP-2 complex subunit mu ::Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but is itself unable to bind directly to membrane components. Clathrin-associated adaptor protein (AP) complexes which can bind directly to both the clathrin lattice and to the lipid and protein components of membranes are considered to be the major clathrin adaptors contributing the CCV formation. AP-2 also serves as a cargo receptor to selectively sort the membrane proteins involved in receptor-mediated endocytosis. AP-2 seems to play a role in the recycling of synaptic vesicle membranes from the presynaptic surface. AP-2 recognizes Y-X-X-[FILMV] (Y-X-X-Phi) and [ED]-X-X-X-L-[LI] endocytosis signal motifs within the cytosolic tails of transmembrane cargo molecules. AP-2 may also play a role in maintaining normal post-endocytic trafficking through the ARF6-regulated, non-clathrin pathway. The AP-2 mu subunit binds to transmembrane cargo proteins; it recognizes the Y-X-X-Phi motifs. The surface region interacting with to the Y-X-X-Phi motif is inaccessible in cytosolic AP-2, but becomes accessible through a conformational change following phosphorylation of AP-2 mu subunit at 'Tyr-156' in membrane-associated AP-2. The membrane-specific phosphorylation event appears to involve assembled clathrin which activates the AP-2 mu kinase AAK1 (By similarity). Plays a role in endocytosis of frizzled family members upon Wnt signaling.::Mus musculus (taxid: 10090) confident no hit no match PF00928::Adap_comp_sub 98.74::2-52 GO:0016183::synaptic vesicle coating confident hh_1i31_A_1::1-52 very confident psy5848 1753 Q24212::Protein stoned-B ::Adapter protein involved in endocytic recycling of synaptic vesicles membranes. May act by mediating the retrieval of synaptotagmin protein Syt from the plasma membrane, thereby facilitating the internalization of multiple synaptic vesicles from the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00928::Adap_comp_sub 100.00::1388-1714 GO:0030139::endocytic vesicle confident hh_1i31_A_1::1353-1501,1503-1511,1514-1540,1542-1544,1549-1567,1583-1583,1607-1635,1641-1660,1664-1675,1677-1714 very confident psy13193 198 Q4U116::Electrogenic sodium bicarbonate cotransporter 1 ::Electrogenic sodium/bicarbonate cotransporter with a Na(+):HCO3(-) stoichiometry varying from 1:2 to 1:3. May regulate bicarbonate influx/efflux at the basolateral membrane of cells and regulate intracellular pH.::Sus scrofa (taxid: 9823) portable no hit no match PF00955::HCO3_cotransp 100.00::36-197 GO:0015301::anion:anion antiporter activity confident no hit no match psy4919 96 Q9BE97::Aryl hydrocarbon receptor nuclear translocator ::Required for activity of the Ah (dioxin) receptor. This protein is required for the ligand-binding subunit to translocate from the cytosol to the nucleus after ligand binding. The complex then initiates transcription of genes involved in the activation of PAH procarcinogens (By similarity). The heterodimer with HIF1A or EPAS1/HIF2A functions as a transcriptional regulator of the adaptive response to hypoxia.::Bos taurus (taxid: 9913) confident no hit no match PF00989::PAS 96.17::26-60 GO:0032869::cellular response to insulin stimulus very confident hh_4f3l_B_1::3-94 very confident psy9780 302 P19351::Troponin T, skeletal muscle ::Troponin T is the tropomyosin-binding subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00992::Troponin 99.87::65-279 GO:0005509::calcium ion binding confident hh_1ytz_T_2::217-223,231-237,240-302 very confident psy7417 372 P19351::Troponin T, skeletal muscle ::Troponin T is the tropomyosin-binding subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF00992::Troponin 99.79::132-259 GO:0005509::calcium ion binding confident hh_1j1d_B_1::131-215,218-222 very confident psy1670 68 O44572::Troponin I 4 ::Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00992::Troponin 93.79::44-67 GO:0005634::nucleus confident hh_1ytz_I_1::34-67 confident psy1667 143 O44572::Troponin I 4 ::Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00992::Troponin 100.00::2-113 GO:0005634::nucleus confident hh_1j1d_C_1::2-21,23-96 very confident psy9560 503 O44572::Troponin I 4 ::Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF00992::Troponin 100.00::61-190 GO:0030017::sarcomere confident hh_1j1e_C_1::51-95,97-194,198-219 very confident psy4486 203 O44572::Troponin I 4 ::Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to muscle actomyosin ATPase activity.::Caenorhabditis elegans (taxid: 6239) very confident no hit no match PF00992::Troponin 100.00::44-173 GO:0048468::cell development confident hh_1j1d_C_1::34-81,83-156 very confident psy9066 275 P22459::Potassium voltage-gated channel subfamily A member 4 ::Mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient.::Homo sapiens (taxid: 9606) portable no hit no match PF01007::IRK 99.31::23-187 GO:0016020::membrane confident hh_2r9r_B_1::20-31,34-45,47-92,95-110,162-195,198-212,214-223 very confident psy4727 253 Q14500::ATP-sensitive inward rectifier potassium channel 12 ::Probably participates in establishing action potential waveform and excitability of neuronal and muscle tissues. Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into the cell rather than out of it. Their voltage dependence is regulated by the concentration of extracellular potassium; as external potassium is raised, the voltage range of the channel opening shifts to more positive voltages. The inward rectification is mainly due to the blockage of outward current by internal magnesium. Can be blocked by extracellular barium and cesium.::Homo sapiens (taxid: 9606) confident no hit no match PF01007::IRK 100.00::13-246 GO:0030425::dendrite confident hh_2gix_A_1::55-208,211-245 very confident psy4009 391 O18839::Inward rectifier potassium channel 2 ::Probably participates in establishing action potential waveform and excitability of neuronal and muscle tissues. Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into the cell rather than out of it. Their voltage dependence is regulated by the concentration of extracellular potassium; as external potassium is raised, the voltage range of the channel opening shifts to more positive voltages. The inward rectification is mainly due to the blockage of outward current by internal magnesium. Can be blocked by extracellular barium and cesium.::Sus scrofa (taxid: 9823) confident no hit no match PF01007::IRK 100.00::54-326 GO:0043025::neuronal cell body confident hh_3agw_A_1::192-290,293-326 very confident psy16725 434 P48548::G protein-activated inward rectifier potassium channel 4 ::This potassium channel is controlled by G proteins. Inward rectifier potassium channels are characterized by a greater tendency to allow potassium to flow into the cell rather than out of it. Their voltage dependence is regulated by the concentration of extracellular potassium; as external potassium is raised, the voltage range of the channel opening shifts to more positive voltages. The inward rectification is mainly due to the blockage of outward current by internal magnesium. Can be blocked by external barium.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01007::IRK 100.00::151-432 GO:0043234::protein complex confident hh_2gix_A_1::289-422 very confident psy15310 244 Q95115::Signal transducer and activator of transcription 5A ::Carries out a dual function: signal transduction and activation of transcription. Mediates cellular responses to the cytokine KITLG/SCF and other growth factors. May mediate cellular responses to activated FGFR1, FGFR2, FGFR3 and FGFR4. Binds to the GAS element and activates PRL-induced transcription. Regulates the expression of milk proteins during lactation.::Bos taurus (taxid: 9913) confident no hit no match PF01017::STAT_alpha 99.97::3-202 GO:0033993::response to lipid confident hh_1y1u_A_1::2-52,132-173,176-179,181-243 very confident psy1892 64 P26260::Syndecan-1 ::Cell surface proteoglycan that bears both heparan sulfate and chondroitin sulfate and that links the cytoskeleton to the interstitial matrix.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01034::Syndecan 99.97::1-62 GO:0045202::synapse confident hh_1ejp_A_1::31-45,52-64 confident psy10581 90 Q9UBT7::Alpha-catulin ::May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).::Homo sapiens (taxid: 9606) portable no hit no match PF01044::Vinculin 99.62::3-69 GO:0005912::adherens junction confident hh_1h6g_A_1::1-69 very confident psy11519 150 Q9UBT7::Alpha-catulin ::May modulate the Rho pathway signaling by providing a scaffold for the Lbc Rho guanine nucleotide exchange factor (ARHGEF1).::Homo sapiens (taxid: 9606) confident no hit no match PF01044::Vinculin 100.00::1-150 GO:0005913::cell-cell adherens junction confident hh_1dow_A_1::1-150 very confident psy5460 994 P35220::Catenin alpha ::Associates with the cytoplasmic domain of a variety of cadherins. The association of catenins to cadherins produces a complex which is linked to the actin filament network, and which seems to be of primary importance for cadherins cell-adhesion properties. Can associate with the armadillo protein.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01044::Vinculin 100.00::17-954 GO:0030027::lamellipodium confident hh_1h6g_A_1::1-238 very confident psy5464 481 P35220::Catenin alpha ::Associates with the cytoplasmic domain of a variety of cadherins. The association of catenins to cadherins produces a complex which is linked to the actin filament network, and which seems to be of primary importance for cadherins cell-adhesion properties. Can associate with the armadillo protein.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01044::Vinculin 100.00::19-480 GO:0043229::intracellular organelle confident hh_4ehp_B_1::265-371 very confident psy592 339 O15943::Neural-cadherin ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. May associate with arm neural isoform and participate in the transmission of developmental information.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01049::Cadherin_C 100.00::228-338 GO:0005509::calcium ion binding confident hh_1i7w_B_1::225-252,254-338 very confident psy9969 75 Q24298::DE-cadherin ::Cadherins are calcium dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. N-cadherin may be involved in neuronal recognition mechanism.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01049::Cadherin_C 99.83::5-57 GO:0005509::calcium ion binding confident hh_1q55_A_1::4-60 very confident psy13768 175 Q9H172::ATP-binding cassette sub-family G member 4 ::May be involved in macrophage lipid homeostasis.::Homo sapiens (taxid: 9606) portable no hit no match PF01061::ABC2_membrane 99.35::35-154 GO:0044765::single-organism transport confident no hit no match psy2163 188 O76090::Bestrophin-1 ::Forms calcium-sensitive chloride channels. Highly permeable to bicarbonate.::Homo sapiens (taxid: 9606) confident no hit no match PF01062::Bestrophin 99.36::1-119 GO:0005777::peroxisome confident no hit no match psy2165 145 O88870::Bestrophin-1 ::Forms calcium-sensitive chloride channels. Permeable to bicarbonate.::Mus musculus (taxid: 10090) confident no hit no match PF01062::Bestrophin 98.89::2-48 GO:0005777::peroxisome confident no hit no match psy2164 68 Q23369::Uncharacterized protein ZC518.1 ::::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF01062::Bestrophin 98.82::5-67 GO:0005777::peroxisome confident no hit no match psy2167 79 Q6H1V1::Bestrophin-3 ::Forms calcium-sensitive (By similarity) chloride channels. Permeable to bicarbonate.::Mus musculus (taxid: 10090) portable no hit no match PF01062::Bestrophin 98.99::5-78 GO:0005777::peroxisome confident no hit no match psy15591 159 B5A5T4::Protein quiver ::Required for homeostatic regulation of sleep under normal conditions and after sleep deprivation. Important regulator of the Sh K(+) channel, acting as a signaling molecule that connects sleep drive to lowered membrane excitability, possibly by enhancing K(+) channel activity and thus reducing neuronal excitability.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01064::Activin_recp 97.38::46-138 GO:0008076::voltage-gated potassium channel complex very confident hh_2h7z_B_1::43-45,47-61,75-96,98-103,115-126,128-135 portable psy1440 283 Q9Y6W3::Calpain-7 ::Calcium-regulated non-lysosomal thiol-protease.::Homo sapiens (taxid: 9606) confident no hit no match PF01067::Calpain_III 99.90::142-272 GO:0090541::MIT domain binding confident hh_1qxp_A_1::142-236,240-279 confident psy4375 62 Q16706::Alpha-mannosidase 2 ::Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.::Homo sapiens (taxid: 9606) confident no hit no match PF01074::Glyco_hydro_38 99.58::5-58 GO:0016799::hydrolase activity, hydrolyzing N-glycosyl compounds confident hh_1o7d_A_1::2-58 very confident psy16497 143 O43323::Desert hedgehog protein ::Intercellular signal essential for a variety of patterning events during development. May function as a spermatocyte survival factor in the testes. Essential for testes development.::Homo sapiens (taxid: 9606) portable no hit no match PF01079::Hint 100.00::1-136 GO:0007389::pattern specification process confident hh_1at0_A_1::1-17,23-81 very confident psy4361 122 O43323::Desert hedgehog protein ::Intercellular signal essential for a variety of patterning events during development. May function as a spermatocyte survival factor in the testes. Essential for testes development.::Homo sapiens (taxid: 9606) confident no hit no match PF01085::HH_signal 100.00::33-122 GO:0005509::calcium ion binding confident no hit no match psy5569 110 O08585::Clathrin light chain A ::Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.::Mus musculus (taxid: 10090) confident no hit no match PF01086::Clathrin_lg_ch 99.92::50-107 GO:0042277::peptide binding confident hh_3lvh_D_1::1-36 confident psy2584 397 Q54T48::Probable ubiquitin carboxyl-terminal hydrolase ::Ubiquitin-protein hydrolase is involved both in the processing of ubiquitin precursors and of ubiquitinated proteins. This enzyme is a thiol protease that recognizes and hydrolyzes a peptide bond at the C-terminal glycine of either ubiquitin or nedd8.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF01088::Peptidase_C12 100.00::74-323 GO:0005829::cytosol confident hh_1xd3_A_1::69-74,77-140,183-333 very confident psy6731 258 Q9Y5K5::Ubiquitin carboxyl-terminal hydrolase isozyme L5 ::Protease that specifically cleaves 'Lys-48'-linked polyubiquitin chains. Deubiquitinating enzyme associated with the 19S regulatory subunit of the 26S proteasome. Putative regulatory component of the INO80 complex; however is inactive in the INO80 complex and is activated by a transient interaction of the INO80 complex with the proteasome via ADRM1.::Homo sapiens (taxid: 9606) confident no hit no match PF01088::Peptidase_C12 100.00::6-166 GO:0005829::cytosol confident hh_3rii_A_1::1-166 very confident psy2587 210 no hit no match no hit no match PF01091::PTN_MK_C 99.85::58-114 GO:0005576::extracellular region confident hh_1mkc_A_1::60-101 confident psy8885 148 P18293::Atrial natriuretic peptide receptor 1 ::Receptor for the atrial natriuretic peptide NPPA/ANP and the brain natriuretic peptide NPPB/BNP which are potent vasoactive hormones playing a key role in cardiovascular homeostasis. Has guanylate cyclase activity upon binding of the ligand.::Mus musculus (taxid: 10090) portable no hit no match PF01094::ANF_receptor 98.10::26-84 GO:0004383::guanylate cyclase activity confident hh_1dp4_A_1::6-114 very confident psy8573 123 P70180::Atrial natriuretic peptide receptor 3 ::Receptor for the natriuretic peptide hormones, binding with similar affinities atrial natriuretic peptide NPPA/ANP, brain natriuretic peptide NPPB/BNP, and C-type natriuretic peptide NPPC/CNP. May function as a clearance receptor for NPPA, NPPB and NPPC, regulating their local concentrations and effects. May regulate diuresis, blood pressure and skeletal development. Does not have guanylate cyclase activity.::Mus musculus (taxid: 10090) portable no hit no match PF01094::ANF_receptor 98.67::3-99 GO:0007165::signal transduction confident hh_1dp4_A_1::5-30,32-58,60-60,63-103 very confident psy9174 127 Q14416::Metabotropic glutamate receptor 2 ::Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate cyclase activity. May mediate suppression of neurotransmission or may be involved in synaptogenesis or synaptic stabilization.::Homo sapiens (taxid: 9606) portable no hit no match PF01094::ANF_receptor 97.68::78-121 GO:0007200::phospholipase C-activating G-protein coupled receptor signaling pathway confident hh_3mq4_A_1::43-71,73-124 very confident psy15460 123 Q5RDQ8::Metabotropic glutamate receptor 7 ::Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate cyclase activity.::Pongo abelii (taxid: 9601) portable no hit no match PF01094::ANF_receptor 97.75::20-96 GO:0007200::phospholipase C-activating G-protein coupled receptor signaling pathway confident hh_3mq4_A_1::3-15,20-114 very confident psy9921 61 Q5RAL3::Metabotropic glutamate receptor 3 ::Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate cyclase activity.::Pongo abelii (taxid: 9601) portable no hit no match PF01094::ANF_receptor 93.32::30-61 GO:0008066::glutamate receptor activity confident hh_3sm9_A_1::3-61 very confident psy2803 141 Q03445::Glutamate receptor 1 ::Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01094::ANF_receptor 96.14::29-85 GO:0008328::ionotropic glutamate receptor complex confident hh_4gpa_A_1::11-87 confident psy3581 146 O88871::Gamma-aminobutyric acid type B receptor subunit 2 ::Receptor for GABA. The activity of this receptor is mediated by G-proteins that inhibit adenylyl cyclase activity, stimulates phospholipase A2, activates potassium channels, inactivates voltage-dependent calcium-channels and modulates inositol phospholipids hydrolysis. Plays a critical role in the fine-tuning of inhibitory synaptic transmission. Pre-synaptic GABA-B-R inhibit neurotransmitter release by down-regulating high-voltage activated calcium channels, whereas postsynaptic GABA-B-R decrease neuronal excitability by activating a prominent inwardly rectifying potassium (Kir) conductance that underlies the late inhibitory postsynaptic potentials. Not only implicated in synaptic inhibition but also in hippocampal long-term potentiation, slow wave sleep, muscle relaxation and antinociception.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01094::ANF_receptor 98.87::10-115 GO:0031631::negative regulation of synaptic vesicle fusion to presynaptic membrane confident hh_4f11_A_1::11-134 very confident psy15459 114 O15303::Metabotropic glutamate receptor 6 ::Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate cyclase activity.::Homo sapiens (taxid: 9606) portable no hit no match PF01094::ANF_receptor 97.85::48-112 GO:0043229::intracellular organelle confident hh_3mq4_A_1::1-19,22-113 very confident psy12232 202 Q26614::Fibroblast growth factor receptor ::Receptor for basic fibroblast growth factor.::Strongylocentrotus purpuratus (taxid: 7668) portable no hit no match PF01094::ANF_receptor 95.48::86-200 GO:0071683::sensory dendrite confident hh_3tt0_A_1::2-37 confident psy189 171 D3ZTX0::Transmembrane emp24 domain-containing protein 7 ::Potential role in vesicular protein trafficking, mainly in the early secretory pathway. Appears to play a role in the biosynthesis of secreted cargo including processing and post-translational modifications.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01105::EMP24_GP25L 99.72::71-166 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_1olm_A_1::73-102,106-163 portable psy5395 237 Q8WW62::Transmembrane emp24 domain-containing protein 6 ::::Homo sapiens (taxid: 9606) confident no hit no match PF01105::EMP24_GP25L 100.00::48-229 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment very confident hh_2d7n_A_1::82-128 portable psy3529 97 D3ZTX0::Transmembrane emp24 domain-containing protein 7 ::Potential role in vesicular protein trafficking, mainly in the early secretory pathway. Appears to play a role in the biosynthesis of secreted cargo including processing and post-translational modifications.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01105::EMP24_GP25L 99.60::1-69 GO:0005794::Golgi apparatus confident no hit no match psy3528 218 Q9Y3B3::Transmembrane emp24 domain-containing protein 7 ::Potential role in vesicular protein trafficking, mainly in the early secretory pathway. Appears to play a role in the biosynthesis of secreted cargo including processing and post-translational modifications.::Homo sapiens (taxid: 9606) very confident no hit no match PF01105::EMP24_GP25L 100.00::30-207 GO:0030126::COPI vesicle coat very confident hh_4dzg_A_1::34-57,60-63,66-107 portable psy13839 413 Q15363::Transmembrane emp24 domain-containing protein 2 ::Involved in vesicular protein trafficking. Mainly functions in the early secretory pathway but also in post-Golgi membranes. Thought to act as cargo receptor at the lumenal side for incorporation of secretory cargo molecules into transport vesicles and to be involved in vesicle coat formation at the cytoplasmic side. In COPII vesicle-mediated anterograde transport involved in the transport of GPI-anchored proteins and proposed to act togther with TMED10 as their cargo receptor; the function specifically implies SEC24C and SEC24D of the COPII vesicle coat and lipid raft-like microdomains of the ER. Recognizes GPI anchors structural remodeled in the ER by PGAP1 and MPPE1. In COPI vesicle-mediated retrograde transport inhibits the GTPase-activating activity of ARFGAP1 towards ARF1 thus preventing immature uncoating and allowing cargo selection to take place. Involved in trafficking of G protein-coupled receptors (GPCRs). Regulates F2RL1, OPRM1 and P2RY4 exocytic trafficking from the Golgi to the plasma membrane thus contributing to receptor resensitization. Facilitates CASR maturation and stabilization in the early secretory pathway and increases CASR plasma membrane targeting. Proposed to be involved in organization of intracellular membranes such as the maintenance of the Golgi apparatus. May also play a role in the biosynthesis of secreted cargo such as eventual processing.::Homo sapiens (taxid: 9606) portable no hit no match PF01105::EMP24_GP25L 99.93::37-309 GO:0044699::single-organism process confident hh_1olm_A_1::116-152 portable psy15308 270 Q295B2::Transmembrane emp24 domain-containing protein eca ::Eca and bai are essential, though not redundant, for dorsoventral patterning of the embryo. Specifically required during early embryogenesis for the activity of maternal tkv, while the zygotic tkv is not affected. Involved in Golgi organization.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident no hit no match PF01105::EMP24_GP25L 100.00::76-267 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_1olm_A_1::78-106,121-145,148-164,166-171,174-183 portable psy4005 202 Q0P5A5::Cyclin-dependent kinases regulatory subunit 1 ::Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.::Bos taurus (taxid: 9913) confident no hit no match PF01111::CKS 100.00::85-154 GO:0019005::SCF ubiquitin ligase complex confident hh_1cks_A_1::81-157 very confident psy4617 314 Q5R507::F-actin-capping protein subunit beta ::F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments. Plays a role in the regulation of cell morphology and cytoskeletal organization.::Pongo abelii (taxid: 9601) very confident no hit no match PF01115::F_actin_cap_B 100.00::11-279 GO:0005829::cytosol confident hh_3aa0_B_1::7-118,152-283 very confident psy4618 96 P34686::F-actin-capping protein subunit beta ::F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF01115::F_actin_cap_B 100.00::11-91 GO:0051015::actin filament binding confident hh_3aa0_B_1::11-22,25-30,36-91 very confident psy2115 77 Q27367::Protein croquemort ::Macrophage receptor for apoptotic cells.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF01130::CD36 99.86::1-55 GO:0002433::immune response-regulating cell surface receptor signaling pathway involved in phagocytosis confident no hit no match psy14960 250 P97943::Scavenger receptor class B member 1 ::Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01130::CD36 100.00::13-250 GO:0006869::lipid transport confident rp_1vt4_I_1::9-21,23-26,28-45,52-107,122-127,130-144,155-174,179-193,195-207 portable psy16523 85 P27615::Lysosome membrane protein 2 ::Act as a lysosomal receptor for glucosylceramidase (GBA) targeting.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01130::CD36 99.93::1-82 GO:0044464::cell part confident no hit no match psy2923 141 P97943::Scavenger receptor class B member 1 ::Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01130::CD36 100.00::2-140 GO:0044464::cell part confident rp_1vt4_I_1::14-20,23-25,29-77,81-82,84-137 portable psy2117 81 P97943::Scavenger receptor class B member 1 ::Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01130::CD36 99.96::2-81 GO:0044464::cell part confident no hit no match psy16515 570 P27615::Lysosome membrane protein 2 ::Act as a lysosomal receptor for glucosylceramidase (GBA) targeting.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01130::CD36 100.00::74-523 GO:0050896::response to stimulus confident rp_1vt4_I_1::189-212,215-241,244-306,313-329,331-359,361-375,380-388,394-413,425-468 portable psy11460 927 P97943::Scavenger receptor class B member 1 ::Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01130::CD36 100.00::2-320 GO:0050896::response to stimulus confident rp_1vt4_I_1::195-198,201-203,205-227,233-255,258-261,271-274,278-281,283-295,297-302,314-347,352-356,358-374,376-389,399-420,423-447,452-473,475-506,520-531,534-539,541-576,578-627,630-663,669-670,680-716,718-742,746-751 portable psy2112 336 P97943::Scavenger receptor class B member 1 ::Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01130::CD36 100.00::3-335 GO:0071813::lipoprotein particle binding confident rp_1qzv_F_1::10-13,20-23,33-39,43-55 portable psy14970 137 Q61009::Scavenger receptor class B member 1 ::Receptor for different ligands such as phospholipids, cholesterol ester, lipoproteins, phosphatidylserine and apoptotic cells. Probable receptor for HDL, located in particular region of the plasma membrane, called caveolae. Facilitates the flux of free and esterified cholesterol between the cell surface and extracellular donors and acceptors, such as HDL and to a lesser extent, apoB-containing lipoproteins and modified lipoproteins. Probably involved in the phagocytosis of apoptotic cells, via its phosphatidylserine binding activity (By similarity). Plays an important role in the uptake of HDL cholesteryl ester.::Mus musculus (taxid: 10090) portable no hit no match PF01130::CD36 100.00::1-130 GO:0071813::lipoprotein particle binding confident no hit no match psy5312 124 Q26492::Ion transport peptide-like ::::Schistocerca gregaria (taxid: 7010) confident no hit no match PF01147::Crust_neurohorm 100.00::46-119 GO:0046331::lateral inhibition confident hh_1j0t_A_1::46-114,116-120 very confident psy8093 148 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01151::ELO 99.48::78-138 GO:0005783::endoplasmic reticulum confident no hit no match psy12593 122 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 99.50::66-122 GO:0005783::endoplasmic reticulum confident no hit no match psy12387 98 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01151::ELO 99.60::28-89 GO:0005783::endoplasmic reticulum confident no hit no match psy11849 94 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 99.58::1-92 GO:0005783::endoplasmic reticulum confident no hit no match psy10161 197 Q3S8M4::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs) (By similarity). Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum (By similarity). May play a critical role in early brain and skin development.::Macaca mulatta (taxid: 9544) confident no hit no match PF01151::ELO 100.00::1-166 GO:0005783::endoplasmic reticulum confident no hit no match psy1130 135 Q9GZR5::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.::Homo sapiens (taxid: 9606) portable no hit no match PF01151::ELO 99.35::48-105 GO:0005783::endoplasmic reticulum confident no hit no match psy11790 110 Q9GZR5::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.::Homo sapiens (taxid: 9606) portable no hit no match PF01151::ELO 99.50::44-105 GO:0005783::endoplasmic reticulum confident no hit no match psy12386 161 A1L3X0::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs, especially C18:3(n-3) acyl-CoAs and C18:3(n-6)-CoAs. Also active toward C20:4-, C18:0-, C18:1-, C18:2-and C16:0-CoAs, and weakly toward C20:0-CoA. Little or no activity toward C22:0-, C24:0-, or C26:0-CoAs.::Homo sapiens (taxid: 9606) confident no hit no match PF01151::ELO 100.00::2-157 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy1129 106 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 99.54::47-105 GO:0005789::endoplasmic reticulum membrane confident rp_1vt4_I_1::3-26,29-35,37-61,68-75,78-96,100-100 portable psy1132 106 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 100.00::2-104 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy12384 356 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 100.00::139-353 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy11848 184 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 100.00::11-184 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy10424 187 P40319::Elongation of fatty acids protein 3 ::Affects plasma membrane H(+)-ATPase activity. May act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1, HXT3 and SNF3. Could be also a component of the membrane bound fatty acid elongation systems that produce the 26-carbon very long chain fatty acids that are precursors for ceramide and sphingolipids. Is essential for the conversion of 24-carbon fatty acids to 26 carbon species.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF01151::ELO 100.00::27-185 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy15113 218 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01151::ELO 100.00::51-213 GO:0006633::fatty acid biosynthetic process confident no hit no match psy1127 65 Q9GZR5::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.::Homo sapiens (taxid: 9606) portable no hit no match PF01151::ELO 99.74::2-62 GO:0016021::integral to membrane confident no hit no match psy12645 218 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 100.00::1-197 GO:0016747::transferase activity, transferring acyl groups other than amino-acyl groups confident no hit no match psy1085 254 Q5ZJR8::Elongation of very long chain fatty acids protein 6 ::Condensing enzyme that catalyzes the synthesis of saturated and monounsaturated fatty acids.::Gallus gallus (taxid: 9031) very confident no hit no match PF01151::ELO 100.00::40-253 GO:0030176::integral to endoplasmic reticulum membrane confident no hit no match psy17115 103 Q9GZR5::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.::Homo sapiens (taxid: 9606) confident no hit no match PF01151::ELO 100.00::2-101 GO:0030176::integral to endoplasmic reticulum membrane confident no hit no match psy598 194 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 100.00::2-155 GO:0034625::fatty acid elongation, monounsaturated fatty acid confident no hit no match psy12383 152 P25358::Elongation of fatty acids protein 2 ::Involved in synthesis of 1,3-beta-glucan. Could be a subunit of 1,3-beta-glucan synthase. Could be also a component of the membrane bound fatty acid elongation systems that produce the 26-carbon very long chain fatty acids that are precursors for ceramide and sphingolipids. Appears to be involved in the elongation of fatty acids up to 24 carbons. Appears to have the highest affinity for substrates with chain length less than 22 carbons.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF01151::ELO 100.00::3-152 GO:0034625::fatty acid elongation, monounsaturated fatty acid confident no hit no match psy14394 200 P25358::Elongation of fatty acids protein 2 ::Involved in synthesis of 1,3-beta-glucan. Could be a subunit of 1,3-beta-glucan synthase. Could be also a component of the membrane bound fatty acid elongation systems that produce the 26-carbon very long chain fatty acids that are precursors for ceramide and sphingolipids. Appears to be involved in the elongation of fatty acids up to 24 carbons. Appears to have the highest affinity for substrates with chain length less than 22 carbons.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF01151::ELO 99.90::27-154 GO:0034625::fatty acid elongation, monounsaturated fatty acid confident no hit no match psy12548 151 P39540::Elongation of fatty acids protein 1 ::May be a membrane bound enzyme involved in the highly specific elongation of saturated 14-carbon fatty acids (14:0) to 16-carbon species (16:0).::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF01151::ELO 99.97::1-114 GO:0034625::fatty acid elongation, monounsaturated fatty acid confident no hit no match psy1647 111 Q9GZR5::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.::Homo sapiens (taxid: 9606) portable no hit no match PF01151::ELO 100.00::1-111 GO:0034625::fatty acid elongation, monounsaturated fatty acid confident no hit no match psy12547 181 Q9JLJ5::Elongation of very long chain fatty acids protein 1 ::Involved in the biosynthesis of C26 fatty acids and sphingolipids. Condensing enzyme that catalyzes the synthesis of both saturated and monounsaturated very long chain fatty acids. Exhibits activity toward saturated C18 to C26 acyl-CoA substrates, with the highest activity towards C22:0 acyl-CoA. Important for saturated C24:0 and monounsaturated C24:1 sphingolipid synthesis. Important for sphingolipid biosynthesis.::Mus musculus (taxid: 10090) confident no hit no match PF01151::ELO 100.00::8-177 GO:0034625::fatty acid elongation, monounsaturated fatty acid confident no hit no match psy12866 106 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01151::ELO 99.59::36-96 GO:0042761::very long-chain fatty acid biosynthetic process confident no hit no match psy11906 268 D4ADY9::Elongation of very long chain fatty acids protein 7 ::Condensing enzyme that catalyzes the synthesis of saturated and polyunsaturated very long chain fatty acids. Highest activity toward C18 acyl-CoAs.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01151::ELO 100.00::28-266 GO:0042761::very long-chain fatty acid biosynthetic process very confident no hit no match psy12385 188 P40319::Elongation of fatty acids protein 3 ::Affects plasma membrane H(+)-ATPase activity. May act on a glucose-signaling pathway that controls the expression of several genes that are transcriptionally regulated by glucose such as PMA1, HXT3 and SNF3. Could be also a component of the membrane bound fatty acid elongation systems that produce the 26-carbon very long chain fatty acids that are precursors for ceramide and sphingolipids. Is essential for the conversion of 24-carbon fatty acids to 26 carbon species.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF01151::ELO 100.00::31-188 GO:0042761::very long-chain fatty acid biosynthetic process confident no hit no match psy17252 1076 Q9GZR5::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.::Homo sapiens (taxid: 9606) portable no hit no match PF01151::ELO 100.00::758-1046 GO:0042761::very long-chain fatty acid biosynthetic process confident hh_1mox_A_1::586-599 confident psy11842 163 Q9GZR5::Elongation of very long chain fatty acids protein 4 ::Condensing enzyme that elongates saturated and monounsaturated very long chain fatty acids (VLCFAs). Elongates C24:0 and C26:0 acyl-CoAs. Seems to represent a photoreceptor-specific component of the fatty acid elongation system residing on the endoplasmic reticulum. May be implicated in docosahexaenoic acid (DHA) biosynthesis, which requires dietary consumption of the essential alpha-linolenic acid and a subsequent series of three elongation steps. May play a critical role in early brain and skin development.::Homo sapiens (taxid: 9606) portable no hit no match PF01151::ELO 99.62::68-157 GO:0042761::very long-chain fatty acid biosynthetic process confident no hit no match psy10425 71 Q9NXB9::Elongation of very long chain fatty acids protein 2 ::Condensing enzyme that catalyzes the synthesis of polyunsaturated very long chain fatty acid (C20- and C22-PUFA). Acts specifically toward polyunsaturated acyl-CoA with the higher activity toward C20:4(n-6) acyl-CoA.::Homo sapiens (taxid: 9606) confident no hit no match PF01151::ELO 99.79::1-57 GO:0042761::very long-chain fatty acid biosynthetic process confident no hit no match psy8080 415 Q22799::Dynein light chain 1, cytoplasmic ::Acts as a non-catalytic accessory component of a dynein complex.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF01151::ELO 100.00::239-405 GO:0072686::mitotic spindle confident hh_1yo3_A_1::150-234 very confident psy5178 219 Q9R087::Glypican-6 ::Cell surface proteoglycan that bears heparan sulfate. Putative cell surface coreceptor for growth factors, extracellular matrix proteins, proteases and anti-proteases.::Mus musculus (taxid: 10090) portable no hit no match PF01153::Glypican 100.00::3-216 GO:0017147::Wnt-protein binding confident hh_3odn_A_1::3-54,73-161,165-201,205-217 very confident psy17671 248 P50607::Tubby protein homolog ::Functions in signal transduction from heterotrimeric G protein-coupled receptors. Binds to membranes containing phosphatidylinositol 4,5-bisphosphate. Can bind DNA (in vitro). May contribute to the regulation of transcription in the nucleus. Could be involved in the hypothalamic regulation of body weight (By similarity). Contribute to stimulation of phagocytosis of apoptotic retinal pigment epithelium (RPE) cells and macrophages.::Homo sapiens (taxid: 9606) confident no hit no match PF01167::Tub 100.00::87-241 GO:0001917::photoreceptor inner segment confident hh_2fim_A_1::73-77,79-122,125-184,188-241 very confident psy5387 200 Q9NRJ4::Tubby-related protein 4 ::May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Homo sapiens (taxid: 9606) portable no hit no match PF01167::Tub 100.00::118-196 GO:0005737::cytoplasm confident hh_2fim_A_1::119-199 very confident psy17674 302 P50607::Tubby protein homolog ::Functions in signal transduction from heterotrimeric G protein-coupled receptors. Binds to membranes containing phosphatidylinositol 4,5-bisphosphate. Can bind DNA (in vitro). May contribute to the regulation of transcription in the nucleus. Could be involved in the hypothalamic regulation of body weight (By similarity). Contribute to stimulation of phagocytosis of apoptotic retinal pigment epithelium (RPE) cells and macrophages.::Homo sapiens (taxid: 9606) confident no hit no match PF01167::Tub 100.00::131-296 GO:0008277::regulation of G-protein coupled receptor protein signaling pathway confident hh_2fim_A_1::114-121,123-302 very confident psy17501 101 P40123::Adenylyl cyclase-associated protein 2 ::May have a regulatory bifunctional role.::Homo sapiens (taxid: 9606) portable no hit no match PF01213::CAP_N 99.93::15-100 GO:0005737::cytoplasm confident hh_1s0p_A_1::26-100 very confident psy7214 201 Q5S3G4::Cytochrome c oxidase subunit 5B, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Sus scrofa (taxid: 9823) portable no hit no match PF01215::COX5B 100.00::1-74 GO:0005811::lipid particle confident hh_2odx_A_1::1-74 very confident psy2945 134 Q5S3G4::Cytochrome c oxidase subunit 5B, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Sus scrofa (taxid: 9823) confident no hit no match PF01215::COX5B 100.00::35-133 GO:0006629::lipid metabolic process confident hh_2y69_F_1::38-65,67-131 very confident psy13740 185 Q9UR05::Dynein light chain 1, cytoplasmic ::Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident no hit no match PF01221::Dynein_light 100.00::40-128 GO:0005829::cytosol confident hh_1yo3_A_1::40-128 very confident psy16997 105 A4F4L4::Dynein light chain 4, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity.::Sus scrofa (taxid: 9823) very confident no hit no match PF01221::Dynein_light 100.00::16-105 GO:0035085::cilium axoneme confident hh_1yo3_A_1::14-51,53-93,95-105 very confident psy1880 81 O96860::Dynein light chain 2, cytoplasmic ::Acts as a non-catalytic accessory component of a dynein complex.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01221::Dynein_light 100.00::1-77 GO:0072686::mitotic spindle confident hh_1yo3_A_1::1-77 very confident psy10106 101 O96860::Dynein light chain 2, cytoplasmic ::Acts as a non-catalytic accessory component of a dynein complex.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01221::Dynein_light 100.00::12-101 GO:0072686::mitotic spindle very confident hh_1yo3_A_1::18-101 very confident psy14814 100 O96860::Dynein light chain 2, cytoplasmic ::Acts as a non-catalytic accessory component of a dynein complex.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01221::Dynein_light 100.00::10-95 GO:0072686::mitotic spindle very confident hh_1yo3_A_1::6-95 very confident psy1421 89 Q24117::Dynein light chain 1, cytoplasmic ::Acts as a non-catalytic accessory component of a dynein complex.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01221::Dynein_light 100.00::1-89 GO:0072686::mitotic spindle very confident hh_1yo3_A_1::3-89 very confident psy5198 186 Q8BXR9::Oxysterol-binding protein-related protein 6 ::::Mus musculus (taxid: 10090) confident no hit no match PF01237::Oxysterol_BP 100.00::19-178 GO:0005829::cytosol confident hh_1zhx_A_1::15-178 very confident psy3487 538 Q8L751::Oxysterol-binding protein-related protein 1C ::May be involved in the transport of sterols.::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF01237::Oxysterol_BP 100.00::89-387 GO:0015485::cholesterol binding confident hh_1zhx_A_1::108-205,208-240,242-261,263-293,297-297,311-319,332-337,340-340,350-351,354-355,357-387 very confident psy16576 73 O76927::40S ribosomal protein S21 ::May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01249::Ribosomal_S21e 100.00::1-72 GO:0048542::lymph gland development very confident hh_3u5c_V_1::1-31,33-73 very confident psy16599 73 O76927::40S ribosomal protein S21 ::May be an associated component of the ribosome rather than a core structural subunit. May act as a translation initiation factor. Has a role in regulation of cell proliferation in the hematopoietic organs and the imaginal disks of larva.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01249::Ribosomal_S21e 100.00::1-72 GO:0048542::lymph gland development very confident hh_3u5c_V_1::1-31,33-73 very confident psy13236 280 Q108U5::F-actin-capping protein subunit alpha-2 ::F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.::Loxodonta africana (taxid: 9785) very confident no hit no match PF01267::F-actin_cap_A 100.00::6-276 GO:0008290::F-actin capping protein complex very confident hh_4akr_A_1::1-65,68-279 very confident psy13237 84 Q9W2N0::F-actin-capping protein subunit alpha ::F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01267::F-actin_cap_A 99.97::3-83 GO:0008290::F-actin capping protein complex confident hh_4akr_A_1::3-83 very confident psy14327 140 no hit no match no hit no match PF01284::MARVEL 97.20::48-131 GO:0005887::integral to plasma membrane very confident no hit no match psy16940 240 P28347::Transcriptional enhancer factor TEF-1 ::Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein MST1/MST2, in complex with its regulatory protein SAV1, phosphorylates and activates LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and WWTR1/TAZ. Acts by mediating gene expression of YAP1 and WWTR1/TAZ, thereby regulating cell proliferation, migration and epithelial mesenchymal transition (EMT) induction. Binds specifically and cooperatively to the SPH and GT-IIC 'enhansons' (5'-GTGGAATGT-3') and activates transcription in vivo in a cell-specific manner. The activation function appears to be mediated by a limiting cell-specific transcriptional intermediary factor (TIF). Involved in cardiac development. Binds to the M-CAT motif.::Homo sapiens (taxid: 9606) confident no hit no match PF01285::TEA 100.00::27-232 GO:0035329::hippo signaling cascade very confident hh_3l15_A_1::27-42,45-109,111-240 very confident psy12066 164 P30052::Protein scalloped ::Transcription factor which plays a key role in the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. The Hippo/SWH signaling pathway inhibits the activity of the transcriptional complex formed by Scalloped (sd) and Yki and the target genes of this pathway include cyclin-E (cycE), diap1 and bantam. Sd promotes nuclear localization of Yki. Involved in the regulation of cell-specific gene expression during development, particularly in the differentiation of the nervous system. When in combination with vestigial (vg) it acts as a transcriptional activation complex that regulates gene expression in the wing. Binding to vg switches the DNA target selectivity of sd. Required autonomously for cell proliferation and viability within the wing blade. Required for proper sensory organ precursor (SOP) differentiation at the wing margin; required for correct expression of sens.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01285::TEA 99.94::55-138 GO:0035329::hippo signaling cascade confident hh_2hzd_A_1::55-107,109-126 very confident psy16529 94 Q5R7H8::Thymosin beta-4 ::Seraspenide inhibits the entry of hematopoietic pluripotent stem cells into the S-phase.::Pongo abelii (taxid: 9601) confident no hit no match PF01290::Thymosin 99.65::7-57 GO:0005829::cytosol confident hh_3sjh_B_1::56-94 confident psy2844 100 P41126::60S ribosomal protein L13 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01294::Ribosomal_L13e 99.96::1-80 GO:0022625::cytosolic large ribosomal subunit confident hh_3u5e_L_1::1-28,30-32,42-67,70-100 very confident psy7580 133 Q4WUD3::Probable Xaa-Pro aminopeptidase P ::Catalyzes the removal of a penultimate prolyl residue from the N-termini of peptides.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable no hit no match PF01321::Creatinase_N 91.42::37-131 GO:0005829::cytosol confident hh_3ctz_A_1::9-26,32-35,37-99,101-117 very confident psy509 158 Q0V8S0::Hepatocyte growth factor-regulated tyrosine kinase substrate ::Involved in intracellular signal transduction mediated by cytokines and growth factors. When associated with STAM it suppresses DNA signaling upon stimulation by IL-2 and GM-CSF. Could be a direct effector of PI3-kinase in vesicular pathway via early endosomes and may regulate trafficking to early and late endosomes by recruiting clathrin. May concentrate ubiquitinated receptors within clathrin-coated regions. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with STAM (ESCRT-0 complex). The ESCRT-0 complex binds ubiquitin and acts as sorting machinery that recognizes ubiquitinated receptors and transfers them to further sequential lysosomal sorting/trafficking processes. May contribute to the efficient recruitment of SMADs to the activin receptor complex. Involved in receptor recycling via its association with the CART complex, a multiprotein complex required for efficient transferrin receptor recycling but not for EGFR degradation.::Bos taurus (taxid: 9913) confident no hit no match PF01363::FYVE 99.82::24-86 GO:0005829::cytosol confident hh_3zyq_A_1::1-88 very confident psy1895 140 Q5R5R4::RUN and FYVE domain-containing protein 2 ::::Pongo abelii (taxid: 9601) confident no hit no match PF01363::FYVE 99.85::69-132 GO:0005829::cytosol confident hh_2yw8_A_1::68-140 very confident psy8222 198 Q5ZLY5::Pleckstrin homology domain-containing family F member 2 ::::Gallus gallus (taxid: 9031) confident no hit no match PF01363::FYVE 99.81::54-119 GO:0007032::endosome organization confident hh_3mpx_A_1::2-70,72-120 very confident psy405 66 Q68CP9::AT-rich interactive domain-containing protein 2 ::Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Required for the stability of the SWI/SNF chromatin remodeling complex SWI/SNF-B (PBAF). May be involved in targeting the complex to different genes. May be involved in regulating transcriptional activation of cardiac genes.::Homo sapiens (taxid: 9606) portable no hit no match PF01388::ARID 99.79::11-65 GO:0005700::polytene chromosome confident hh_2kk0_A_1::14-65 very confident psy9225 350 O57329::Frizzled-7 ::Receptor for Wnt proteins. Most of frizzled receptors are coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues.::Gallus gallus (taxid: 9031) confident no hit no match PF01392::Fz 99.92::38-152 GO:0016477::cell migration confident hh_1ijy_A_1::33-146,148-157 very confident psy3004 169 Q13467::Frizzled-5 ::Receptor for Wnt proteins. Most of frizzled receptors are coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues. Interacts specifically with Wnt5A to induce the beta-catenin pathway.::Homo sapiens (taxid: 9606) confident no hit no match PF01392::Fz 99.88::37-130 GO:0032729::positive regulation of interferon-gamma production confident hh_1ijy_A_1::33-134 very confident psy1289 87 no hit no match no hit no match PF01392::Fz 99.87::13-87 GO:0044444::cytoplasmic part confident hh_1ijy_A_1::9-23,25-87 very confident psy8405 225 P45973::Chromobox protein homolog 5 ::Component of heterochromatin that recognizes and binds histone H3 tails methylated at 'Lys-9' (H3K9me), leading to epigenetic repression. In contrast, it is excluded from chromatin when 'Tyr-41' of histone H3 is phosphorylated (H3Y41ph). Can interact with lamin-B receptor (LBR). This interaction can contribute to the association of the heterochromatin with the inner nuclear membrane. Involved in the formation of functional kinetochore through interaction with MIS12 complex proteins.::Homo sapiens (taxid: 9606) portable no hit no match PF01393::Chromo_shadow 99.91::157-214 GO:0000785::chromatin confident hh_3q6s_A_1::150-221 very confident psy9217 90 Q7PVR3::Eukaryotic translation initiation factor 3 subunit H ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) confident no hit no match PF01398::JAB 99.65::15-69 GO:0032403::protein complex binding confident hh_4e0q_A_1::15-69 very confident psy16066 182 Q5ZLA5::Eukaryotic translation initiation factor 3 subunit E ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Gallus gallus (taxid: 9031) confident no hit no match PF01399::PCI 97.14::108-178 GO:0016605::PML body confident hh_3txn_A_1::15-56,60-89,91-92,96-161,166-178 portable psy9284 82 P98063::Bone morphogenetic protein 1 ::Cleaves the C-terminal propeptides of procollagen I, II and III. Induces cartilage and bone formation. May participate in dorsoventral patterning during early development by cleaving chordin (CHRD).::Mus musculus (taxid: 10090) portable no hit no match PF01400::Astacin 99.94::2-81 GO:0008233::peptidase activity confident hh_3edh_A_1::2-81 very confident psy13283 124 Q21059::Zinc metalloproteinase nas-34 ::Probable metalloprotease required for normal hatching and migration of neuroblasts. May act by degrading eggshells proteins at hatching.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF01400::Astacin 100.00::1-96 GO:0008233::peptidase activity confident hh_3edh_A_1::1-96 very confident psy16119 151 Q9GLN7::Angiotensin-converting enzyme ::Converts angiotensin I to angiotensin II by release of the terminal His-Leu, this results in an increase of the vasoconstrictor activity of angiotensin. Also able to inactivate bradykinin, a potent vasodilator. Has also a glycosidase activity which releases GPI-anchored proteins from the membrane by cleaving the mannose linkage in the GPI moiety.::Pan troglodytes (taxid: 9598) confident no hit no match PF01401::Peptidase_M2 100.00::1-108 GO:0051707::response to other organism confident hh_3nxq_A_1::1-27,35-108 very confident psy12771 160 Q24323::Semaphorin-2A ::Plays a role in growth cones guidance. Required for both proper adult behavior and survival. Can function in vivo as a selective target-derived signal that inhibits the formation of specific synaptic terminal arbors.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01403::Sema 99.63::33-159 GO:0007629::flight behavior confident hh_1olz_A_1::48-96,104-124,131-132,136-141,143-159 very confident psy5392 100 Q24322::Semaphorin-1A ::Plays a role in growth cones guidance.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01403::Sema 99.96::2-100 GO:0008039::synaptic target recognition confident hh_1q47_A_1::2-100 very confident psy6150 148 Q24322::Semaphorin-1A ::Plays a role in growth cones guidance.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01403::Sema 99.95::6-141 GO:0044464::cell part confident hh_1q47_A_1::6-23,27-113,117-141 very confident psy10772 378 Q24323::Semaphorin-2A ::Plays a role in growth cones guidance. Required for both proper adult behavior and survival. Can function in vivo as a selective target-derived signal that inhibits the formation of specific synaptic terminal arbors.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01403::Sema 100.00::8-257 GO:0048523::negative regulation of cellular process confident hh_3nvq_A_1::8-28,32-103,105-132,136-155,165-168,170-217,219-235,239-301,306-315,321-323,325-364 very confident psy17097 130 P54763::Ephrin type-B receptor 2 ::Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Functions in axon guidance during development. Involved in the guidance of commissural axons, that form a major interhemispheric connection between the 2 temporal lobs of the cerebral cortex. Also involved in guidance of contralateral inner ear efferent growth cones at the midline and of retinal ganglion cell axons to the optic disk. Beside axon guidance, also regulates dendritic spines development and maturation and stimulates the formation of excitatory synapses. Upon activation by EFNB1, abolishes the ARHGEF15-mediated negative regulation on excitatory synapse formation. Controls other aspects of development including angiogenesis, palate development and in inner ear development through regulation of endolymph production. Forward and reverse signaling through the EFNB2/EPHB2 complex regulate movement and adhesion of cells that tubularize the urethra and septate the cloaca. May function as a tumor suppressor.::Mus musculus (taxid: 10090) portable no hit no match PF01404::Ephrin_lbd 100.00::4-130 GO:0048013::ephrin receptor signaling pathway confident hh_2wo1_A_1::4-82,85-130 very confident psy16323 448 Q06852::Cell surface glycoprotein 1 ::::Clostridium thermocellum (strain ATCC 27405 / DSM 1237) (taxid: 203119) portable no hit no match PF01410::COLFI 99.83::308-446 GO:0006977::DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest confident hh_4ae2_A_1::297-334,340-342,345-361,363-390,395-446 confident psy17790 2564 P17139::Collagen alpha-1(IV) chain ::Collagen type IV is specific for basement membranes.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF01413::C4 100.00::2218-2327 GO:0005581::collagen confident hh_1t60_C_1::2215-2303,2306-2441 very confident psy17777 1375 Q14031::Collagen alpha-6(IV) chain ::Type IV collagen is the major structural component of glomerular basement membranes (GBM), forming a 'chicken-wire' meshwork together with laminins, proteoglycans and entactin/nidogen.::Homo sapiens (taxid: 9606) portable no hit no match PF01413::C4 100.00::1261-1374 GO:0005587::collagen type IV confident hh_1t60_C_1::1145-1165,1171-1375 very confident psy10880 166 Q8UWJ4::Delta-like protein D ::Acts as a ligand for Notch receptors and is involved in primary neurogenesis and somitogenesis. Can activate Notch receptors, thereby playing a key role in lateral inhibition, a process that prevents the immediate neighbors of each nascent neural cell from simultaneously embarking on neural differentiation. Required in somite segmentation to keep the oscillations of neighboring presomitic mesoderm cells synchronized.::Danio rerio (taxid: 7955) confident no hit no match PF01414::DSL 99.73::67-129 GO:0005938::cell cortex confident hh_2vj2_A_1::78-138,140-161 very confident psy17082 104 Q9QXX0::Protein jagged-1 ::Ligand for multiple Notch receptors and involved in the mediation of Notch signaling. May be involved in cell-fate decisions during hematopoiesis. Seems to be involved in early and late stages of mammalian cardiovascular development. Inhibits myoblast differentiation (By similarity). May regulate fibroblast growth factor-induced angiogenesis.::Mus musculus (taxid: 10090) confident no hit no match PF01414::DSL 99.79::19-81 GO:0043229::intracellular organelle confident hh_2vj2_A_1::31-103 very confident psy14875 104 Q9QXX0::Protein jagged-1 ::Ligand for multiple Notch receptors and involved in the mediation of Notch signaling. May be involved in cell-fate decisions during hematopoiesis. Seems to be involved in early and late stages of mammalian cardiovascular development. Inhibits myoblast differentiation (By similarity). May regulate fibroblast growth factor-induced angiogenesis.::Mus musculus (taxid: 10090) confident no hit no match PF01414::DSL 99.79::19-81 GO:0043229::intracellular organelle confident hh_2vj2_A_1::31-103 very confident psy4488 194 Q9Y6I3::Epsin-1 ::Binds to membranes enriched in phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2). Modifies membrane curvature and facilitates the formation of clathrin-coated invaginations (By similarity). Regulates receptor-mediated endocytosis.::Homo sapiens (taxid: 9606) confident no hit no match PF01417::ENTH 100.00::102-193 GO:0030100::regulation of endocytosis confident hh_1inz_A_1::84-193 very confident psy8172 98 Q9P267::Methyl-CpG-binding domain protein 5 ::Binds to heterochromatin. Does not interact with either methylated or unmethylated DNA (in vitro).::Homo sapiens (taxid: 9606) portable no hit no match PF01429::MBD 98.61::20-79 GO:0003677::DNA binding confident hh_2ky8_A_1::20-55,66-68,70-79 confident psy3970 104 Q9Z2E1::Methyl-CpG-binding domain protein 2 ::Binds CpG islands in promoters where the DNA is methylated at position 5 of cytosine within CpG dinucleotides. Binds hemi-methylated DNA as well. Recruits histone deacetylases and DNA methyltransferases. Acts as transcriptional repressor and plays a role in gene silencing. May enhance the activation of some unmethylated cAMP-responsive promoters (By similarity). Selectively represses transcription activity of methylated rRNA promoters.::Mus musculus (taxid: 10090) portable no hit no match PF01429::MBD 99.93::19-89 GO:0003677::DNA binding confident hh_2ky8_A_1::19-88 very confident psy11542 187 no hit no match no hit no match PF01436::NHL 93.07::133-155 GO:0005576::extracellular region confident hh_3q6k_A_1::24-36,46-65,83-122,128-157,159-186 very confident psy3509 157 no hit no match no hit no match PF01442::Apolipoprotein 98.38::17-59 GO:0043234::protein complex confident hh_3r2p_A_1::106-141 portable psy9049 64 Q29AK2::Leishmanolysin-like peptidase ::Essential for the coordination of mitotic progression, and also plays a role in cell migration.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF01457::Peptidase_M8 94.15::3-42 GO:0008233::peptidase activity confident hh_1lml_A_1::3-42 portable psy5108 345 P45880::Voltage-dependent anion-selective channel protein 2 ::Forms a channel through the mitochondrial outer membrane that allows diffusion of small hydrophilic molecules. The channel adopts an open conformation at low or zero membrane potential and a closed conformation at potentials above 30-40 mV. The open state has a weak anion selectivity whereas the closed state is cation-selective.::Homo sapiens (taxid: 9606) confident no hit no match PF01459::Porin_3 100.00::2-345 GO:0005253::anion channel activity confident hh_3emn_X_1::1-61,151-155,157-345 very confident psy5109 145 Q94920::Voltage-dependent anion-selective channel ::Forms a channel through the cell membrane that allows diffusion of small hydrophilic molecules.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01459::Porin_3 99.89::2-144 GO:0006811::ion transport confident hh_3emn_X_1::1-66,68-145 very confident psy2245 88 no hit no match no hit no match PF01465::GRIP 99.53::34-76 GO:0048047::mating behavior, sex discrimination confident hh_1upt_B_1::35-51,53-80 confident psy15975 312 B1H1E4::E3 ubiquitin-protein ligase arih1 ::E3 ubiquitin-protein ligase, which catalyzes polyubiquitination of target proteins together with ubiquitin-conjugating enzyme E2 ube2l3.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF01485::IBR 99.48::27-88 GO:0004842::ubiquitin-protein ligase activity very confident hh_1wd2_A_1::107-165 very confident psy16544 63 P50636::E3 ubiquitin-protein ligase RNF19A ::E3 ubiquitin-protein ligase which accepts ubiquitin from E2 ubiquitin-conjugating enzymes UBE2L3 and UBE2L6 in the form of a thioester and then directly transfers the ubiquitin to targeted substrates, such as SNCAIP or CASR.::Mus musculus (taxid: 10090) confident no hit no match PF01485::IBR 99.25::17-59 GO:0005515::protein binding confident hh_2ct7_A_1::12-38,41-51,53-59 confident psy1749 87 Q925F3::Probable E3 ubiquitin-protein ligase RNF144A ::E3 ubiquitin-protein ligase which accepts ubiquitin from E2 ubiquitin-conjugating enzymes UBE2L3 and UBE2L6 in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.::Mus musculus (taxid: 10090) confident no hit no match PF01485::IBR 98.57::14-55 GO:0005794::Golgi apparatus confident hh_1wd2_A_1::12-56 very confident psy7602 95 B1H1E4::E3 ubiquitin-protein ligase arih1 ::E3 ubiquitin-protein ligase, which catalyzes polyubiquitination of target proteins together with ubiquitin-conjugating enzyme E2 ube2l3.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF01485::IBR 98.06::57-94 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_1wim_A_1::4-29,31-71 very confident psy15037 149 Q9WVS6::E3 ubiquitin-protein ligase parkin ::Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins, such as BCL2, SYT11, CCNE1, GPR37, STUB1, a 22 kDa O-linked glycosylated isoform of SNCAIP, SEPT5, ZNF746 and AIMP2. Mediates monoubiquitination as well as 'Lys-48'-linked and 'Lys-63'-linked polyubiquitination of substrates depending on the context. Participates in the removal and/or detoxification of abnormally folded or damaged protein by mediating 'Lys-63'-linked polyubiquitination of misfolded proteins such as PARK7: 'Lys-63'-linked polyubiquitinated misfolded proteins are then recognized by HDAC6, leading to their recruitment to aggresomes, followed by degradation. Mediates 'Lys-63'-linked polyubiquitination of SNCAIP, possibly playing a role in Lewy-body formation. Mediates monoubiquitination of BCL2, thereby acting as a positive regulator of autophagy. Promotes the autophagic degradation of dysfunctional depolarized mitochondria. Mediates 'Lys-48'-linked polyubiquitination of ZNF746, followed by degradation of ZNF746 by the proteasome; possibly playing a role in role in regulation of neuron death. Limits the production of reactive oxygen species (ROS). Loss of this ubiquitin ligase activity appears to be the mechanism underlying pathogenesis of PARK2. May protect neurons against alpha synuclein toxicity, proteasomal dysfunction, GPR37 accumulation, and kainate-induced excitotoxicity. May play a role in controlling neurotransmitter trafficking at the presynaptic terminal and in calcium-dependent exocytosis. Regulates cyclin-E during neuronal apoptosis. May represent a tumor suppressor gene.::Mus musculus (taxid: 10090) portable no hit no match PF01485::IBR 97.88::10-31 GO:1900407::regulation of cellular response to oxidative stress confident hh_2jmo_A_1::5-36 confident psy15764 469 Q7RTP6::Protein-methionine sulfoxide oxidase MICAL3 ::Monooxygenase that promotes depolymerization of F-actin by mediating oxidation of specific methionine residues on actin. Acts by modifying actin subunits through the addition of oxygen to form methionine-sulfoxide, leading to promote actin filament severing and prevent repolymerization (By similarity). Involved in exocytic vesicles tethering and fusion: the monooxygenase activity is required for this process.::Homo sapiens (taxid: 9606) confident no hit no match PF01494::FAD_binding_3 93.64::200-251 GO:0043195::terminal bouton confident hh_2bry_A_1::5-239,241-302 very confident psy17052 68 P25286::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01496::V_ATPase_I 99.32::1-66 GO:0005769::early endosome very confident hh_3rrk_A_1::1-41 confident psy511 67 P25286::V-type proton ATPase 116 kDa subunit a isoform 1 ::Required for assembly and activity of the vacuolar ATPase. Potential role in differential targeting and regulation of the enzyme for a specific organelle.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01496::V_ATPase_I 99.31::2-66 GO:0005794::Golgi apparatus confident hh_3rrk_A_1::2-21,34-46,48-66 portable psy3987 175 A8MXZ3::Keratin-associated protein 9-1 ::In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin-associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. The matrix proteins include the high-sulfur and high-glycine-tyrosine keratins.::Homo sapiens (taxid: 9606) portable no hit no match PF01500::Keratin_B2 99.42::47-168 GO:0005576::extracellular region confident no hit no match psy7223 166 P53625::Mannosyl-oligosaccharide alpha-1,2-mannosidase isoform B ::Involved in the maturation of Asn-linked oligosaccharides. Progressively trim alpha-1,2-linked mannose residues from Man(9)GlcNAc(2) to produce Man(5)GlcNAc(2).::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01532::Glyco_hydro_47 100.00::1-146 GO:0004559::alpha-mannosidase activity confident hh_1nxc_A_1::1-22,24-156 very confident psy8156 362 Q61090::Frizzled-7 ::Receptor for Wnt proteins. Most of frizzled receptors are coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues. Activation by Wnt8 induces expression of beta-catenin target genes.::Mus musculus (taxid: 10090) portable no hit no match PF01534::Frizzled 100.00::234-361 GO:0007389::pattern specification process confident hh_1ijx_A_1::27-136,140-147 very confident psy8180 471 Q9R216::Frizzled-9 ::Receptor for Wnt proteins. Most of frizzled receptors are coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues.::Mus musculus (taxid: 10090) confident no hit no match PF01534::Frizzled 100.00::139-459 GO:0030154::cell differentiation confident hh_1ijx_A_1::2-87,89-98 very confident psy14918 463 Q9H461::Frizzled-8 ::Receptor for Wnt proteins. Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalosomes. The beta-catenin canonical signaling pathway leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues. Coreceptor along with RYK of Wnt proteins, such as WNT1.::Homo sapiens (taxid: 9606) confident no hit no match PF01534::Frizzled 100.00::46-363 GO:0032729::positive regulation of interferon-gamma production confident hh_3uon_A_1::53-113,116-118,120-121,127-213 portable psy8147 197 Q08463::Frizzled-1 ::Receptor for Wnt proteins. Most of frizzled receptors are coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues. Activation by Wnt8 induces expression of beta-catenin target genes.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01534::Frizzled 100.00::2-186 GO:0042813::Wnt-activated receptor activity confident no hit no match psy8153 193 Q08463::Frizzled-1 ::Receptor for Wnt proteins. Most of frizzled receptors are coupled to the beta-catenin canonical signaling pathway, which leads to the activation of disheveled proteins, inhibition of GSK-3 kinase, nuclear accumulation of beta-catenin and activation of Wnt target genes. A second signaling pathway involving PKC and calcium fluxes has been seen for some family members, but it is not yet clear if it represents a distinct pathway or if it can be integrated in the canonical pathway, as PKC seems to be required for Wnt-mediated inactivation of GSK-3 kinase. Both pathways seem to involve interactions with G-proteins. May be involved in transduction and intercellular transmission of polarity information during tissue morphogenesis and/or in differentiated tissues. Activation by Wnt8 induces expression of beta-catenin target genes.::Rattus norvegicus (taxid: 10116) confident no hit no match PF01534::Frizzled 100.00::43-161 GO:0042813::Wnt-activated receptor activity confident no hit no match psy12958 294 O42224::Smoothened homolog (Fragment) ::G protein-coupled receptor that probably associates with the patched protein (PTCH) to transduce the hedgehog's proteins signal. Binding of sonic hedgehog (SHH) to its receptor patched is thought to prevent normal inhibition by patched of smoothened (SMO).::Gallus gallus (taxid: 9031) portable no hit no match PF01534::Frizzled 100.00::166-294 GO:0043229::intracellular organelle confident hh_1ijx_A_1::13-23,25-37,39-61,63-120 very confident psy6538 153 Q9TV63::Myosin-2 ::Muscle contraction. Required for cytoskeleton organization.::Sus scrofa (taxid: 9823) confident no hit no match PF01576::Myosin_tail_1 99.96::1-153 GO:0050896::response to stimulus confident hh_1i84_S_2::4-17 confident psy8114 111 P61849::Dromyosuppressin ::Myoinhibiting neuropeptide.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01581::FARP 90.80::89-97 GO:0045822::negative regulation of heart contraction confident no hit no match psy11469 267 Q9MYW3::Toll-like receptor 4 ::Cooperates with LY96 and CD14 to mediate the innate immune response to bacterial lipopolysaccharide (LPS). Acts via MYD88, TIRAP and TRAF6, leading to NF-kappa-B activation, cytokine secretion and the inflammatory response.::Equus caballus (taxid: 9796) portable no hit no match PF01582::TIR 99.91::138-256 GO:0048583::regulation of response to stimulus confident hh_3j0a_A_1::1-26,31-51,56-62,65-86,88-109,111-112,115-121,129-178,180-240,243-243,245-258 very confident psy5097 246 Q9CZX5::PIN2/TERF1-interacting telomerase inhibitor 1 ::Microtubule-binding protein essential for faithful chromosome segregation. Mediates TRF1 and TERT accumulation in nucleolus and enhances TRF1 binding to telomeres. Inhibits telomerase activity. May inhibit cell proliferation and act as tumor suppressor.::Mus musculus (taxid: 10090) confident no hit no match PF01585::G-patch 99.52::26-70 GO:0007004::telomere maintenance via telomerase confident no hit no match psy9365 98 Q9QX47::Protein SON ::RNA-binding protein that acts as a mRNA splicing cofactor by promoting efficient splicing of transcripts that posses weak splice sites. Specifically promotes splicing of many cell-cycle and DNA-repair transcripts that posses weak splice sites, such as TUBG1, KATNB1, TUBGCP2, AURKB, PCNT, AKT1, RAD23A, and FANCG. Probably acts by facilitating the interaction between Serine/arginine-rich proteins such as SRSF2 and the RNA polymerase II. Also binds to DNA; binds to the consensus DNA sequence: 5'-GA[GT]AN[CG][AG]CC-3' (By similarity). May also regulate the ghrelin signaling in hypothalamic neuron by acting as a negative regulator of GHSR expression.::Mus musculus (taxid: 10090) confident no hit no match PF01585::G-patch 99.69::39-83 GO:0043484::regulation of RNA splicing confident no hit no match psy2450 254 P87143::Uncharacterized RNA-binding protein C57A7.13 ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF01585::G-patch 99.51::182-226 GO:0044428::nuclear part confident hh_1p7a_A_1::80-106 portable psy12790 98 Q8CGZ0::Calcium homeostasis endoplasmic reticulum protein ::Involved in calcium homeostasis, growth and proliferation.::Mus musculus (taxid: 10090) confident no hit no match PF01585::G-patch 99.52::20-67 GO:0051533::positive regulation of NFAT protein import into nucleus confident no hit no match psy6027 531 Q8IGJ0::Protein EFR3 homolog cmp44E ::An essential gene required for embryogenesis; required for cell viability.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF01602::Adaptin_N 91.08::34-325 GO:0045202::synapse confident hh_4fdd_A_1::73-88,90-130,132-177,188-206,229-266,268-302,306-328,330-348 confident psy1263 115 Q5R5M2::AP-1 complex subunit gamma-1 ::Subunit of clathrin-associated adaptor protein complex 1 that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.::Pongo abelii (taxid: 9601) confident no hit no match PF01602::Adaptin_N 99.09::8-114 GO:0055037::recycling endosome confident bp_1w63_A_1::1-106 very confident psy14681 394 Q28651::Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform ::The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment. The PP2A-PPP2R5C holoenzyme may activate TP53 and play a role in DNA damage-induced inhibition of cell proliferation. PP2A-PPP2R5C may also regulate the ERK signaling pathway through ERK dephosphorylation.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match PF01603::B56 100.00::2-394 GO:0000159::protein phosphatase type 2A complex confident hh_2npp_B_1::2-146,245-339,349-394 very confident psy8243 624 Q28653::Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform ::The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match PF01603::B56 100.00::120-577 GO:0008233::peptidase activity confident hh_2npp_B_1::119-195,204-218,243-244,249-249,272-452,459-584 very confident psy14879 138 Q9D7Q1::Chitotriosidase-1 ::Degrades chitin, chitotriose and chitobiose. May participate in the defense against nematodes and other pathogens.::Mus musculus (taxid: 10090) portable no hit no match PF01607::CBM_14 99.46::81-127 GO:0005576::extracellular region confident hh_1wb0_A_1::1-78,81-121 very confident psy6352 136 no hit no match no hit no match PF01607::CBM_14 99.48::88-135 GO:0005615::extracellular space confident hh_1wb0_A_1::5-22,24-54 confident psy11499 70 no hit no match no hit no match PF01607::CBM_14 99.60::22-69 GO:0005615::extracellular space confident hh_1wb0_A_1::22-63 confident psy2017 255 no hit no match no hit no match PF01607::CBM_14 99.21::196-246 GO:0005615::extracellular space confident hh_1dqc_A_2::26-31,33-36,39-80,84-87 confident psy10483 287 no hit no match no hit no match PF01607::CBM_14 99.16::71-123 GO:0005615::extracellular space confident hh_1dqc_A_2::136-140,142-150,153-189,193-194 confident psy11498 143 no hit no match no hit no match PF01607::CBM_14 99.41::95-142 GO:0005615::extracellular space confident hh_1dqc_A_1::11-17,19-29,31-65,69-72 confident psy10482 84 no hit no match no hit no match PF01607::CBM_14 99.52::28-75 GO:0005615::extracellular space confident hh_1dqc_A_1::13-22,24-25,28-61,65-80 very confident psy13460 281 no hit no match no hit no match PF01607::CBM_14 99.10::9-64 GO:0006030::chitin metabolic process confident hh_1dqc_A_2::77-81,83-127,129-134 confident psy9625 394 Q02328::Huntington interacting protein related 1 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF01608::I_LWEQ 100.00::194-347 GO:0005794::Golgi apparatus confident hh_1r0d_A_2::2-40,59-72,74-112,115-175 very confident psy8070 173 Q04499::Proline dehydrogenase 1, mitochondrial ::Converts proline to delta-1-pyrroline-5-carboxylate.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01619::Pro_dh 95.82::105-155 GO:0005739::mitochondrion confident hh_2ekg_A_1::91-141,143-160,162-171 confident psy11740 563 Q08169::Hyaluronidase ::May play a role in reproduction.::Apis mellifera (taxid: 7460) confident no hit no match PF01630::Glyco_hydro_56 100.00::62-432 GO:0044710::single-organism metabolic process confident hh_1fcq_A_1::60-153,155-164,193-315,317-348,364-441 very confident psy16410 88 Q80WK7::Equilibrative nucleoside transporter 3 ::Mediates both influx and efflux of nucleosides across the membrane (equilibrative transporter). Mediates transport of adenine, adenosine and uridine.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01733::Nucleoside_tran 99.93::7-88 GO:0071705::nitrogen compound transport confident no hit no match psy14482 95 Q55DW9::Rho GTPase-activating protein gacZ ::Rho GTPase-activating protein involved in the signal transduction pathway.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF01753::zf-MYND 99.53::6-42 GO:0005737::cytoplasm confident hh_2d8q_A_1::2-48 very confident psy10008 214 Q5F3V0::SET and MYND domain-containing protein 4 ::::Gallus gallus (taxid: 9031) portable no hit no match PF01753::zf-MYND 98.88::124-163 GO:0005737::cytoplasm confident hh_3n71_A_1::77-155,157-163,165-209 very confident psy3195 119 O77562::Deformed epidermal autoregulatory factor 1 homolog ::Transcription factor that binds to sequence with multiple copies of 5'-TTC[CG]G-3' present in its own promoter and that of the HNRPA2B1 gene. Down-regulates transcription of these genes. Binds to the retinoic acid response element (RARE) 5'-AGGGTTCACCGAAAGTTCA-3'. Activates the proenkephalin gene independently of promoter binding, probably through protein-protein interaction. Regulates epithelial cell proliferation and side-branching in the mammary gland. Required for neural tube closure and skeletal patterning. Controls the expression of peripheral tissue antigens in pancreatic lymph nodes.::Pan troglodytes (taxid: 9598) confident no hit no match PF01753::zf-MYND 99.32::69-105 GO:0030154::cell differentiation confident hh_2odd_A_1::43-56,65-110 very confident psy12784 70 no hit no match no hit no match PF01757::Acyl_transf_3 95.55::34-62 GO:0030421::defecation confident no hit no match psy14358 381 Q9BYG0::Lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase ::Beta-1,3-N-acetylglucosaminyltransferase that plays a key role in the synthesis of lacto- or neolacto-series carbohydrate chains on glycolipids, notably by participating in biosynthesis of HNK-1 and Lewis X carbohydrate structures. Has strong activity toward lactosylceramide (LacCer) and neolactotetraosylceramide (nLc(4)Cer; paragloboside), resulting in the synthesis of Lc(3)Cer and neolactopentaosylceramide (nLc(5)Cer), respectively. Probably plays a central role in regulating neolacto-series glycolipid synthesis during embryonic development.::Homo sapiens (taxid: 9606) confident no hit no match PF01762::Galactosyl_T 100.00::99-287 GO:0009312::oligosaccharide biosynthetic process confident hh_2j0a_A_1::81-127,132-132,135-163,166-195,199-207,209-210,212-217,221-235,237-259,261-271,273-294 confident psy16851 366 Q9N295::Beta-1,3-galactosyltransferase 5 (Fragment) ::Catalyzes the transfer of Gal to GlcNAc-based acceptors with a preference for the core3 O-linked glycan GlcNAc(beta1,3)GalNAc structure. Can use glycolipid LC3Cer as an efficient acceptor.::Pan troglodytes (taxid: 9598) confident no hit no match PF01762::Galactosyl_T 100.00::97-285 GO:0009312::oligosaccharide biosynthetic process confident hh_2j0a_A_1::83-112,116-128,133-135,138-167,170-209,211-216,220-233,235-269,271-306 confident psy12882 325 Q9Y5Z6::Beta-1,3-galactosyltransferase 1 ::Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.::Homo sapiens (taxid: 9606) portable no hit no match PF01762::Galactosyl_T 100.00::91-325 GO:0009312::oligosaccharide biosynthetic process confident hh_2j0a_A_1::78-107,111-121,182-184,187-216,219-249,252-260,262-268,272-286,288-321 confident psy12347 428 Q9Y5Z6::Beta-1,3-galactosyltransferase 1 ::Beta-1,3-galactosyltransferase that transfers galactose from UDP-galactose to substrates with a terminal beta-N-acetylglucosamine (beta-GlcNAc) residue. Involved in the biosynthesis of the carbohydrate moieties of glycolipids and glycoproteins. Inactive towards substrates with terminal alpha-N-acetylglucosamine (alpha-GlcNAc) or alpha-N-acetylgalactosamine (alpha-GalNAc) residues.::Homo sapiens (taxid: 9606) portable no hit no match PF01762::Galactosyl_T 100.00::54-242 GO:0009312::oligosaccharide biosynthetic process confident hh_2j0a_A_1::36-81,86-87,90-119,122-149,153-162,164-166,168-172,176-190,192-214,216-226,228-250 confident psy1401 79 Q98TF8::60S ribosomal protein L22 ::::Gallus gallus (taxid: 9031) confident no hit no match PF01776::Ribosomal_L22e 100.00::2-79 GO:0022625::cytosolic large ribosomal subunit confident hh_3iz5_W_1::2-79 very confident psy11271 78 Q9JJI8::60S ribosomal protein L38 ::::Mus musculus (taxid: 10090) very confident no hit no match PF01781::Ribosomal_L38e 100.00::2-77 GO:0034463::90S preribosome assembly very confident hh_3iz5_n_1::1-28,37-77 very confident psy8386 73 Q96PH1::NADPH oxidase 5 ::Calcium-dependent NADPH oxidase that generates superoxide. Also functions as a calcium-dependent proton channel and may regulate redox-dependent processes in lymphocytes and spermatozoa. May play a role in cell growth and apoptosis. Isoform v2 and isoform v5 are involved in endothelial generation of reactive oxygen species (ROS), proliferation and angiogenesis and contribute to endothelial response to thrombin.::Homo sapiens (taxid: 9606) confident no hit no match PF01794::Ferric_reduct 97.75::2-43 GO:0055114::oxidation-reduction process confident no hit no match psy2757 61 O43679::LIM domain-binding protein 2 ::Binds to the LIM domain of a wide variety of LIM domain-containing transcription factors.::Homo sapiens (taxid: 9606) confident no hit no match PF01803::LIM_bind 98.33::16-57 GO:0000790::nuclear chromatin confident no hit no match psy2754 367 O43679::LIM domain-binding protein 2 ::Binds to the LIM domain of a wide variety of LIM domain-containing transcription factors.::Homo sapiens (taxid: 9606) very confident no hit no match PF01803::LIM_bind 100.00::27-229 GO:0000790::nuclear chromatin very confident hh_2jtn_A_1::287-321,323-330 very confident psy2753 247 O43679::LIM domain-binding protein 2 ::Binds to the LIM domain of a wide variety of LIM domain-containing transcription factors.::Homo sapiens (taxid: 9606) very confident no hit no match PF01803::LIM_bind 100.00::1-186 GO:0035019::somatic stem cell maintenance confident rp_1vt4_I_1::5-37,41-50,57-60,64-105,109-112,118-119,121-134,137-143,146-160,164-192,194-207 portable psy4529 123 P56721::Transcription factor collier ::May act as a 'second-level regulator' of head patterning. Required for establishment of the PS(-1)/PS0 parasegmental border and formation of the intercalary segment. Required for expression of the segment polarity genes hedgehog, engrailed and wingless, and the segment-identity genes CAP and collar in the intercalary segment. Required at the onset of the gastrulation for the correct formation of the mandibular segment.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF01833::TIG 97.41::26-94 GO:0003677::DNA binding very confident hh_3muj_A_1::25-123 very confident psy14529 59 P56721::Transcription factor collier ::May act as a 'second-level regulator' of head patterning. Required for establishment of the PS(-1)/PS0 parasegmental border and formation of the intercalary segment. Required for expression of the segment polarity genes hedgehog, engrailed and wingless, and the segment-identity genes CAP and collar in the intercalary segment. Required at the onset of the gastrulation for the correct formation of the mandibular segment.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF01833::TIG 96.97::26-57 GO:0045893::positive regulation of transcription, DNA-dependent very confident hh_3muj_A_1::26-59 very confident psy12987 82 Q9ESZ0::DNA repair protein XRCC1 ::Corrects defective DNA strand-break repair and sister chromatid exchange following treatment with ionizing radiation and alkylating agents.::Rattus norvegicus (taxid: 10116) portable no hit no match PF01834::XRCC1_N 100.00::1-78 GO:0005634::nucleus confident hh_3lqc_A_1::1-81 very confident psy1968 215 Q2T9M4::Coiled-coil domain-containing protein lobo homolog ::Plays a role in the regulation of germ cells differentiation during spermatogenesis, particularly during meiosis and spermiogenesis. May be involved in sperm motility.::Bos taurus (taxid: 9913) portable no hit no match PF01841::Transglut_core 96.57::157-211 GO:0044424::intracellular part confident hh_3kd4_A_1::159-180,182-211 portable psy6220 101 Q5R6M6::Collagen type IV alpha-3-binding protein ::May mediate the intracellular trafficking of ceramide in a non-vesicular manner.::Pongo abelii (taxid: 9601) portable no hit no match PF01852::START 99.62::17-99 GO:0005794::Golgi apparatus confident hh_2e3n_A_1::6-70,72-97 very confident psy9485 190 Q64701::Retinoblastoma-like protein 1 ::Key regulator of entry into cell division. Directly involved in heterochromatin formation by maintaining overall chromatin structure and, in particular, that of constitutive heterochromatin by stabilizing histone methylation. Recruits and targets histone methyltransferases SUV420H1 and SUV420H2, leading to epigenetic transcriptional repression. Controls histone H4 'Lys-20' trimethylation. Probably acts as a transcription repressor by recruiting chromatin-modifying enzymes to promoters. Potent inhibitor of E2F-mediated trans-activation. Forms a complex with adenovirus E1A and with SV40 large T antigen. May bind and modulate functionally certain cellular proteins with which T and E1A compete for pocket binding. May act as a tumor suppressor.::Mus musculus (taxid: 10090) portable no hit no match PF01858::RB_A 100.00::26-183 GO:0043550::regulation of lipid kinase activity confident hh_4ell_A_1::30-183 very confident psy13952 445 Q5U2V8::ER membrane protein complex subunit 3 ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF01956::DUF106 99.97::214-392 GO:0030140::trans-Golgi network transport vesicle confident no hit no match psy993 164 Q0Q028::Putative defense protein 3 ::May have antimicrobial activity.::Antheraea mylitta (taxid: 34739) portable no hit no match PF02014::Reeler 100.00::28-155 GO:0005576::extracellular region confident hh_2zou_A_1::23-29,31-38,40-97,99-107,112-163 very confident psy12005 188 P56198::Cell death activator CIDE-3 ::Induces apoptosis.::Mus musculus (taxid: 10090) portable no hit no match PF02017::CIDE-N 100.00::11-87 GO:0005634::nucleus confident hh_1ibx_B_1::8-90 very confident psy9567 122 Q9W3W5::Protein shifted ::Required for normal accumulation and movement of lipid-modified hedgehog (hh) morphogen. May act by stabilizing the interaction between heparan sulfate proteoglycans (HSPGs) and hh, HSPGs being required for diffusion of hh morphogen. Not involved in wingless (wg) morphogen movement, suggesting that it may provide HSPG specificity for Hh.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02019::WIF 100.00::6-112 GO:0005578::proteinaceous extracellular matrix confident hh_2ygo_A_1::5-117 very confident psy15550 125 P59325::Eukaryotic translation initiation factor 5 ::Catalyzes the hydrolysis of GTP bound to the 40S ribosomal initiation complex (40S.mRNA.Met-tRNA[F].eIF-2.GTP) with the subsequent joining of a 60S ribosomal subunit resulting in the release of eIF-2 and the guanine nucleotide. The subsequent joining of a 60S ribosomal subunit results in the formation of a functional 80S initiation complex (80S.mRNA.Met-tRNA[F]).::Mus musculus (taxid: 10090) confident no hit no match PF02020::W2 99.95::12-96 GO:0005829::cytosol confident hh_2iu1_A_1::2-101,103-108 very confident psy8137 88 Q62448::Eukaryotic translation initiation factor 4 gamma 2 ::Appears to play a role in the switch from cap-dependent to IRES-mediated translation during mitosis, apoptosis and viral infection. Cleaved by some caspases and viral proteases.::Mus musculus (taxid: 10090) confident no hit no match PF02020::W2 99.95::6-85 GO:0009888::tissue development confident hh_3l6a_A_1::6-77 very confident psy3925 210 Q6P2Z0::Basic leucine zipper and W2 domain-containing protein 1 ::Enhances histone H4 gene transcription but does not seem to bind DNA directly.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF02020::W2 99.93::131-210 GO:0043025::neuronal cell body confident hh_2iu1_A_1::106-208 very confident psy8743 154 Q7L1Q6::Basic leucine zipper and W2 domain-containing protein 1 ::Enhances histone H4 gene transcription but does not seem to bind DNA directly.::Homo sapiens (taxid: 9606) confident no hit no match PF02020::W2 98.10::122-154 GO:0043025::neuronal cell body confident hh_3jui_A_1::35-120,122-154 confident psy17900 157 Q7L1Q6::Basic leucine zipper and W2 domain-containing protein 1 ::Enhances histone H4 gene transcription but does not seem to bind DNA directly.::Homo sapiens (taxid: 9606) confident no hit no match PF02020::W2 98.60::122-157 GO:0043025::neuronal cell body confident hh_2iu1_A_1::75-88,101-157 confident psy13311 873 Q92736::Ryanodine receptor 2 ::Calcium channel that mediates the release of Ca(2+) from the sarcoplasmic reticulum into the cytoplasm and thereby plays a key role in triggering cardiac muscle contraction. Aberrant channel activation can lead to cardiac arrhythmia. In cardiac myocytes, calcium release is triggered by increased Ca(2+) levels due to activation of the L-type calcium channel CACNA1C. The calcium channel activity is modulated by formation of heterotetramers with RYR3. Required for cellular calcium ion homeostasis. Required for embryonic heart development.::Homo sapiens (taxid: 9606) portable no hit no match PF02026::RyR 99.93::606-688 GO:0005875::microtubule associated complex confident hh_4erv_A_1::417-449,461-467,490-506,530-544,559-576,589-687 very confident psy1108 79 P13182::Cytochrome c oxidase subunit 6A1, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Bos taurus (taxid: 9913) confident no hit no match PF02046::COX6A 99.92::5-79 GO:0005739::mitochondrion confident hh_1v54_G_1::23-57,62-79 very confident psy1109 79 P13182::Cytochrome c oxidase subunit 6A1, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Bos taurus (taxid: 9913) confident no hit no match PF02046::COX6A 99.92::5-79 GO:0005739::mitochondrion confident hh_1v54_G_1::23-57,62-79 very confident psy17595 153 P13182::Cytochrome c oxidase subunit 6A1, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Bos taurus (taxid: 9913) confident no hit no match PF02046::COX6A 100.00::76-146 GO:0005739::mitochondrion confident hh_1v54_G_1::76-105,110-153 very confident psy17596 105 P13182::Cytochrome c oxidase subunit 6A1, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Bos taurus (taxid: 9913) confident no hit no match PF02046::COX6A 100.00::6-98 GO:0005811::lipid particle confident hh_1v54_G_1::26-57,62-105 very confident psy14697 175 Q6DFM9::Mitochondrial import receptor subunit TOM20 homolog ::Central component of the receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. Together with tom22 functions as the transit peptide receptor at the surface of the mitochondrion outer membrane and facilitates the movement of preproteins into the tom40 translocation pore.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF02064::MAS20 100.00::51-171 GO:0015450::P-P-bond-hydrolysis-driven protein transmembrane transporter activity confident hh_1om2_A_1::96-173 very confident psy1877 76 P41947::Alpha-galactosidase 6 ::::Saccharomyces cerevisiae (taxid: 4932) confident no hit no match PF02065::Melibiase 94.63::22-42 GO:0005576::extracellular region confident hh_3hg3_A_1::1-59 very confident psy16758 186 Q5R739::Josephin-1 ::Has low protease activity towards poly-ubiquitin chains (in vitro). May act as a deubiquitinating enzyme.::Pongo abelii (taxid: 9601) confident no hit no match PF02099::Josephin 100.00::15-174 GO:0016579::protein deubiquitination confident hh_3o65_A_1::9-33,35-106,122-151,153-158,160-179 very confident psy5397 112 Q9VLM5::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 ::Component of the N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (By similarity). Possesses cell death-inhibiting activity.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF02109::DAD 100.00::2-112 GO:0009409::response to cold very confident no hit no match psy9193 128 Q95UQ1::Putative rho GDP-dissociation inhibitor 1 ::Regulates the GDP/GTP exchange reaction of the Rho proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them (By similarity). Regulates the Rac-dependent signaling pathways controlling cytokinesis, actin reorganization and the contractile vacuole. Required for efficient accumulation of cap at the cell cortex.::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF02115::Rho_GDI 100.00::32-125 GO:0032502::developmental process confident hh_1ds6_B_1::32-54,56-128 very confident psy11574 136 Q2HJ54::Phosphatidylinositol transfer protein alpha isoform ::Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.::Bos taurus (taxid: 9913) confident no hit no match PF02121::IP_trans 100.00::2-127 GO:0000003::reproduction confident hh_1kcm_A_1::2-45,51-75,79-127 very confident psy4655 595 Q9NCL8::Phosphatidylinositol transfer protein 1 ::Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF02121::IP_trans 100.00::1-502 GO:0005737::cytoplasm confident hh_1kcm_A_2::292-356,361-403 very confident psy11577 89 P48738::Phosphatidylinositol transfer protein alpha isoform ::Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match PF02121::IP_trans 99.89::28-88 GO:0008525::phosphatidylcholine transporter activity confident hh_1kcm_A_1::28-88 very confident psy11575 80 Q2HJ54::Phosphatidylinositol transfer protein alpha isoform ::Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.::Bos taurus (taxid: 9913) confident no hit no match PF02121::IP_trans 100.00::1-65 GO:0008525::phosphatidylcholine transporter activity confident hh_1kcm_A_1::1-80 very confident psy4659 132 Q9BZ72::Membrane-associated phosphatidylinositol transfer protein 2 ::Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes (in vitro). Binds calcium ions.::Homo sapiens (taxid: 9606) confident no hit no match PF02121::IP_trans 100.00::8-126 GO:0008525::phosphatidylcholine transporter activity confident hh_1kcm_A_1::10-54,58-62,69-96,104-126 very confident psy1790 299 Q9U9P7::Cytoplasmic phosphatidylinositol transfer protein 1 ::Phosphatidylinositol transfer proteins mediate the monomeric transport of lipids by shielding a lipid from the aqueous environment and binding the lipid in a hydrophobic cavity.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF02121::IP_trans 100.00::2-270 GO:0008525::phosphatidylcholine transporter activity confident hh_1kcm_A_1::2-65,89-270,272-284 very confident psy7301 129 no hit no match no hit no match PF02134::UBACT 99.86::1-57 GO:0019915::lipid storage confident hh_3cmm_A_1::1-128 very confident psy4124 99 Q9XJ54::Nuclear transport factor 2 ::Facilitates protein transport into the nucleus. Could be part of a multicomponent system of cytosolic factors that assemble at the pore complex during nuclear import.::Oryza sativa subsp. japonica (taxid: 39947) confident no hit no match PF02136::NTF2 99.89::12-93 GO:0005635::nuclear envelope confident hh_1zo2_A_1::3-25,28-40,42-96 very confident psy6110 174 Q9UN86::Ras GTPase-activating protein-binding protein 2 ::Probable scaffold protein that may be involved in mRNA transport.::Homo sapiens (taxid: 9606) confident no hit no match PF02136::NTF2 99.79::12-134 GO:0005829::cytosol confident hh_3q90_A_1::1-4,6-102,120-133 very confident psy6106 177 Q6BWC0::Nuclear transport factor 2 ::Facilitates protein transport into the nucleus. Could be part of a multicomponent system of cytosolic factors that assemble at the pore complex during nuclear import.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) confident no hit no match PF02136::NTF2 99.96::34-154 GO:0071011::precatalytic spliceosome confident hh_3ujm_A_1::8-22,45-66,74-155 very confident psy10776 803 P97412::Lysosomal-trafficking regulator ::May be required for sorting endosomal resident proteins into late multivesicular endosomes by a mechanism involving microtubules.::Mus musculus (taxid: 10090) confident no hit no match PF02138::Beach 100.00::513-798 GO:0005829::cytosol confident hh_1t77_A_1::308-346,356-357,385-386,414-418,432-444,453-593,602-660,662-798 very confident psy10782 105 P97412::Lysosomal-trafficking regulator ::May be required for sorting endosomal resident proteins into late multivesicular endosomes by a mechanism involving microtubules.::Mus musculus (taxid: 10090) confident no hit no match PF02138::Beach 100.00::1-104 GO:0009605::response to external stimulus confident hh_1t77_A_1::1-62,71-104 very confident psy1244 73 Q9EPN1::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking.::Mus musculus (taxid: 10090) confident no hit no match PF02138::Beach 98.72::2-27 GO:0043025::neuronal cell body very confident hh_1t77_A_1::1-27 very confident psy946 714 Q6P3S1::DENN domain-containing protein 1B ::Guanine nucleotide exchange factor (GEF) for RAB35. May function as a clathrin-associated sorting protein for RAB35, whereby during clathrin-mediated endocytosis, binds the AP-2 complex and inactivates RAB35, then activates RAB35 for its subsequent function at endosomes.::Homo sapiens (taxid: 9606) portable no hit no match PF02141::DENN 100.00::87-270 GO:0017112::Rab guanyl-nucleotide exchange factor activity confident hh_3tw8_A_1::6-148,152-170,289-504 very confident psy15181 289 P49816::Tuberin ::In complex with TSC1, inhibits the nutrient-mediated or growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by negatively regulating mTORC1 signaling. Acts as a GTPase-activating protein (GAP) for the small GTPase RHEB, a direct activator of the protein kinase activity of mTORC1 (By similarity). Implicated as a tumor suppressor. Involved in microtubule-mediated protein transport, but this seems to be due to unregulated mTOR signaling (By similarity). Specifically stimulates the intrinsic GTPase activity of the Ras-related protein RAP1A and RAB5. Suggesting a possible mechanism for its role in regulating cellular growth.::Rattus norvegicus (taxid: 10116) portable no hit no match PF02145::Rap_GAP 100.00::98-265 GO:0005634::nucleus confident hh_1srq_A_1::49-62,65-92,94-123,127-202,208-211,214-271 very confident psy13052 533 P47736::Rap1 GTPase-activating protein 1 ::GTPase activator for the nuclear Ras-related regulatory protein RAP-1A (KREV-1), converting it to the putatively inactive GDP-bound state.::Homo sapiens (taxid: 9606) confident no hit no match PF02145::Rap_GAP 100.00::200-387 GO:0016020::membrane confident hh_1srq_A_1::68-403 very confident psy2644 119 Q03141::MAP/microtubule affinity-regulating kinase 3 ::Involved in the specific phosphorylation of microtubule-associated proteins for tau, MAP2 and MAP4. Phosphorylates CDC25C. Regulates localization and activity of some histone deacetylases by mediating phosphorylation of HDAC7, promoting subsequent interaction between HDAC7 and 14-3-3 and export from the nucleus.::Mus musculus (taxid: 10090) confident no hit no match PF02149::KA1 99.87::74-119 GO:0050321::tau-protein kinase activity very confident hh_3ose_A_1::13-119 very confident psy2660 149 Q9P0L2::Serine/threonine-protein kinase MARK1 ::Serine/threonine-protein kinase involved in cell polarity and microtubule dynamics regulation. Phosphorylates DCX, MAP2, MAP4 and MAPT/TAU. Involved in cell polarity by phosphorylating the microtubule-associated proteins MAP2, MAP4 and MAPT/TAU at KXGS motifs, causing detachment from microtubules, and their disassembly. Involved in the regulation of neuronal migration through its dual activities in regulating cellular polarity and microtubule dynamics, possibly by phosphorylating and regulating DCX. Also acts as a positive regulator of the Wnt signaling pathway, probably by mediating phosphorylation of dishevelled proteins (DVL1, DVL2 and/or DVL3).::Homo sapiens (taxid: 9606) confident no hit no match PF02149::KA1 99.57::113-145 GO:0050321::tau-protein kinase activity very confident hh_1v5s_A_1::51-66,70-145 very confident psy12432 229 O14511::Pro-neuregulin-2, membrane-bound isoform ::Direct ligand for ERBB3 and ERBB4 tyrosine kinase receptors. Concomitantly recruits ERBB1 and ERBB2 coreceptors, resulting in ligand-stimulated tyrosine phosphorylation and activation of the ERBB receptors. May also promote the heterodimerization with the EGF receptor.::Homo sapiens (taxid: 9606) portable no hit no match PF02158::Neuregulin 98.76::79-166 GO:0008284::positive regulation of cell proliferation confident rp_3ltf_D_1::22-78 confident psy1987 226 P27925::Cyclic AMP-responsive element-binding protein 1 ::Phosphorylation-dependent transcription factor that stimulates transcription upon binding to the DNA cAMP response element (CRE), a sequence present in many viral and cellular promoters. Transcription activation is enhanced by the TORC coactivators which act independently of Ser-117 phosphorylation. Involved in different cellular processes including the synchronization of circadian rhythmicity and the differentiation of adipose cells.::Bos taurus (taxid: 9913) confident no hit no match PF02173::pKID 99.68::50-86 GO:0003700::sequence-specific DNA binding transcription factor activity confident hh_1dh3_A_1::169-223 very confident psy1009 129 O00470::Homeobox protein Meis1 ::Acts as a transcriptional regulator of PAX6. Acts as a transcriptional activator of PF4 in complex with PBX1 or PBX2. Required for hematopoiesis, megakaryocyte lineage development and vascular patterning. May function as a cofactor for HOXA7 and HOXA9 in the induction of myeloid leukemias.::Homo sapiens (taxid: 9606) confident no hit no match PF02178::AT_hook 93.17::13-22 GO:0005667::transcription factor complex confident hh_2ezd_A_1::10-21 portable psy10394 82 P49951::Clathrin heavy chain 1 ::Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. Two different adapter protein complexes link the clathrin lattice either to the plasma membrane or to the trans-Golgi network.::Bos taurus (taxid: 9913) confident no hit no match PF02178::AT_hook 93.38::6-14 GO:0070062::extracellular vesicular exosome confident bp_1xi4_A_1::34-82 very confident psy15122 927 O70566::Protein diaphanous homolog 2 ::May be involved in oogenesis.::Mus musculus (taxid: 10090) portable no hit no match PF02181::FH2 100.00::590-792 GO:0005794::Golgi apparatus confident hh_3eg5_B_1::73-128,130-146,148-186,188-193,198-295,297-404,431-475,477-481 very confident psy15131 529 P48608::Protein diaphanous ::Required for cytokinesis in both mitosis and meiosis. Has a role in actin cytoskeleton organization and is essential for many, if not all, actin-mediated events involving membrane invagination. May serve as a mediator between signaling molecules and actin organizers at specific phases of the cell cycle. Possible component of the contractile ring or may control its function.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02181::FH2 100.00::18-417 GO:0005794::Golgi apparatus confident hh_3obv_E_1::18-80,82-84,102-102,105-132,134-137,139-348,351-484 very confident psy14168 276 Q76LL6::FH1/FH2 domain-containing protein 3 ::Actin-organizing protein that may cause stress fiber formation together with cell elongation.::Mus musculus (taxid: 10090) confident no hit no match PF02181::FH2 100.00::5-273 GO:0030837::negative regulation of actin filament polymerization confident hh_2j1d_G_1::5-43,49-71,74-93,95-97,99-273 very confident psy14169 97 Q76LL6::FH1/FH2 domain-containing protein 3 ::Actin-organizing protein that may cause stress fiber formation together with cell elongation.::Mus musculus (taxid: 10090) confident no hit no match PF02181::FH2 97.89::1-60 GO:0030837::negative regulation of actin filament polymerization confident hh_2j1d_G_1::1-38,42-68 confident psy4168 454 Q9NZ56::Formin-2 ::::Homo sapiens (taxid: 9606) portable no hit no match PF02181::FH2 100.00::78-440 GO:0030838::positive regulation of actin filament polymerization confident hh_2j1d_G_1::79-93,98-145,147-211,214-289,292-337,341-383,385-417,423-448 very confident psy16508 385 Q9FLQ7::Formin-like protein 20 ::::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF02181::FH2 100.00::115-384 GO:0044699::single-organism process confident hh_2j1d_G_1::115-319,321-384 very confident psy1651 141 A7MBL8::Serine/threonine-protein kinase N2 ::Pkc-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. May play a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion and transcription activation signaling processes.::Danio rerio (taxid: 7955) confident no hit no match PF02185::HR1 99.51::54-119 GO:0004672::protein kinase activity confident hh_1cxz_B_1::31-113 very confident psy1652 86 P70268::Serine/threonine-protein kinase N1 ::PKC-related serine/threonine-protein kinase involved in various processes such as regulation of the intermediate filaments of the actin cytoskeleton, cell migration, tumor cell invasion and transcription regulation. Regulates the cytoskeletal network by phosphorylating proteins such as VIM and neurofilament proteins NEFH, NEFL and NEFM, leading to inhibit their polymerization. Phosphorylates 'Ser-575', 'Ser-637' and 'Ser-669' of MAPT/Tau, lowering its ability to bind to microtubules, resulting in disruption of tubulin assembly. Acts as a key coactivator of androgen receptor (ANDR)-dependent transcription, by being recruited to ANDR target genes and specifically mediating phosphorylation of 'Thr-11' of histone H3 (H3T11ph), a specific tag for epigenetic transcriptional activation that promotes demethylation of histone H3 'Lys-9' (H3K9me) by KDM4C/JMJD2C. Phosphorylates HDAC5, HDAC7 and HDAC9, leading to impair their import in the nucleus. Phosphorylates 'Thr-38' of PPP1R14A, 'Ser-159', 'Ser-163' and 'Ser-170', and GFAP. Able to phosphorylate RPS6 in vitro.::Mus musculus (taxid: 10090) confident no hit no match PF02185::HR1 97.65::1-41 GO:0046777::protein autophosphorylation confident rp_1urf_A_1::1-49 very confident psy606 210 Q99501::GAS2-like protein 1 ::Seems to be involved in the cross-linking of microtubules and microfilaments.::Homo sapiens (taxid: 9606) portable no hit no match PF02187::GAS2 100.00::136-207 GO:0010629::negative regulation of gene expression confident hh_1v5r_A_1::132-170,173-209 very confident psy18025 99 Q8JZP9::GAS2-like protein 1 ::Seems to be involved in the cross-linking of microtubules and microfilaments.::Mus musculus (taxid: 10090) portable no hit no match PF02187::GAS2 90.73::72-91 GO:0048523::negative regulation of cellular process confident hh_1v5r_A_1::68-91 portable psy12803 902 Q68BL8::Olfactomedin-like protein 2B ::::Homo sapiens (taxid: 9606) portable no hit no match PF02191::OLF 100.00::552-808 GO:0044421::extracellular region part confident hh_3kld_A_1::297-336,339-414,417-421,425-425,432-468 very confident psy7980 93 P28028::Serine/threonine-protein kinase B-raf ::Involved in the transduction of mitogenic signals from the cell membrane to the nucleus. May play a role in the postsynaptic responses of hippocampal neuron.::Mus musculus (taxid: 10090) portable no hit no match PF02196::RBD 99.97::11-80 GO:0005737::cytoplasm confident hh_3ny5_A_1::8-90 very confident psy7966 194 P28028::Serine/threonine-protein kinase B-raf ::Involved in the transduction of mitogenic signals from the cell membrane to the nucleus. May play a role in the postsynaptic responses of hippocampal neuron.::Mus musculus (taxid: 10090) portable no hit no match PF02196::RBD 99.92::3-71 GO:0005737::cytoplasm confident hh_3ny5_A_1::2-79,83-85 very confident psy18061 60 P16905::cAMP-dependent protein kinase type I regulatory subunit ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02197::RIIa 99.51::21-57 GO:0005829::cytosol confident hh_4din_B_1::5-57 very confident psy15117 114 P41156::Protein C-ets-1 ::Transcription factor.::Rattus norvegicus (taxid: 10116) confident no hit no match PF02198::SAM_PNT 100.00::10-92 GO:0051272::positive regulation of cellular component movement confident hh_2jv3_A_1::1-93 very confident psy15116 78 P41156::Protein C-ets-1 ::Transcription factor.::Rattus norvegicus (taxid: 10116) confident no hit no match PF02198::SAM_PNT 100.00::1-74 GO:0051272::positive regulation of cellular component movement confident hh_2jv3_A_1::1-74 very confident psy4241 305 P15285::Pulmonary surfactant-associated protein B ::Pulmonary surfactant-associated proteins promote alveolar stability by lowering the surface tension at the air-liquid interface in the peripheral air spaces. SP-B increases the collapse pressure of palmitic acid to nearly 70 millinewtons per meter.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF02199::SapA 99.02::48-81 GO:0005794::Golgi apparatus confident hh_2gtg_A_1::88-129,131-169 very confident psy5853 217 Q6PAR5::GTPase-activating protein and VPS9 domain-containing protein 1 ::Acts both as a GTPase-activating protein (GAP) and a guanine nucleotide exchange factor (GEF), and participates in various processes such as endocytosis, insulin receptor internalization or LC2A4/GLUT4 trafficking. Acts as a GEF for the Ras-related protein RAB31 by exchanging bound GDP for free GTP, leading to regulate LC2A4/GLUT4 trafficking. In the absence of insulin, it maintains RAB31 in an active state and promotes a futile cycle between LC2A4/GLUT4 storage vesicles and early endosomes, retaining LC2A4/GLUT4 inside the cells. Upon insulin stimulation, it is translocated to the plasma membrane, releasing LC2A4/GLUT4 from intracellular storage vesicles. Also involved in EGFR trafficking and degradation, possibly by promoting EGFR ubiquitination and subsequent degradation by the proteasome. Has GEF activity for Rab5 and GAP activity for Ras.::Mus musculus (taxid: 10090) confident no hit no match PF02204::VPS9 99.96::115-215 GO:0005829::cytosol confident hh_2ot3_A_1::7-40,43-45,47-95,97-100,103-216 very confident psy10331 183 Q9JM13::Rab5 GDP/GTP exchange factor ::Rab effector protein acting as linker between gamma-adaptin, RAB4A or RAB5A. Involved in endocytic membrane fusion and membrane trafficking of recycling endosomes. Stimulates nucleotide exchange on RAB5A (By similarity). Can act as a ubiquitin ligase.::Mus musculus (taxid: 10090) portable no hit no match PF02204::VPS9 99.95::90-183 GO:0031398::positive regulation of protein ubiquitination confident hh_2ot3_A_1::1-15,18-20,22-183 very confident psy11311 499 Q29L39::Protein purity of essence ::Has a role in growth of the perineurial glial layer of the larval peripheral nerve. May have a role in male fertility and eye development or function. May bind calmodulin.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF02207::zf-UBR 99.45::62-129 GO:0005516::calmodulin binding confident hh_3ny3_A_1::73-128 confident psy6684 77 Q7TSL3::F-box only protein 11 ::Substrate recognition component of the a (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Probably recognizes and binds to phosphorylated target proteins. Binds to and neddylates phosphorylated p53/TP53, inhibiting its transcriptional activity. SCF(FBXO11) does not seem to direct ubiquitination of TP53.::Rattus norvegicus (taxid: 10116) confident no hit no match PF02207::zf-UBR 99.38::25-76 GO:0035246::peptidyl-arginine N-methylation confident hh_3nis_A_1::25-32,34-34,39-75 confident psy17879 154 Q69ZX8::Actin-binding LIM protein 3 ::May act as scaffold protein. May stimulate ABRA activity and ABRA-dependent SRF transcriptional activity.::Mus musculus (taxid: 10090) confident no hit no match PF02209::VHP 99.83::119-154 GO:0045111::intermediate filament cytoskeleton confident rp_1ujs_A_1::78-154 very confident psy5411 88 P39059::Collagen alpha-1(XV) chain ::Endostatin potently inhibits angiogenesis.::Homo sapiens (taxid: 9606) portable no hit no match PF02210::Laminin_G_2 98.64::3-81 GO:0044421::extracellular region part confident hh_1za4_A_1::2-11,13-13,17-81,83-83,85-86 confident psy2580 65 Q8K0E1::BTB/POZ domain-containing protein KCTD15 ::::Mus musculus (taxid: 10090) confident no hit no match PF02214::BTB_2 98.57::37-62 GO:0003714::transcription corepressor activity confident hh_3drx_A_1::29-61 confident psy13459 542 Q9UK17::Potassium voltage-gated channel subfamily D member 3 ::Pore-forming (alpha) subunit of voltage-gated rapidly inactivating A-type potassium channels. May contribute to I(To) current in heart and I(Sa) current in neurons. Channel properties are modulated by interactions with other alpha subunits and with regulatory subunits.::Homo sapiens (taxid: 9606) confident no hit no match PF02214::BTB_2 99.91::43-132 GO:0005250::A-type (transient outward) potassium channel activity very confident hh_2nz0_B_1::5-31,34-144 very confident psy33 214 Q7TNY1::BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in regulation of cytoskeleton structure. The BCR(BACURD2) E3 ubiquitin ligase complex mediates the ubiquitination of RHOA, leading to its degradation by the proteasome, thereby regulating the actin cytoskeleton and cell migration. Its interaction with RHOB may regulate apoptosis (By similarity). May enhance the PCNA-dependent DNA polymerase delta activity.::Rattus norvegicus (taxid: 10116) confident no hit no match PF02214::BTB_2 99.92::15-105 GO:0005730::nucleolus very confident hh_3drx_A_1::7-85,87-150,152-166,169-182 very confident psy1964 531 Q7TNY1::BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in regulation of cytoskeleton structure. The BCR(BACURD2) E3 ubiquitin ligase complex mediates the ubiquitination of RHOA, leading to its degradation by the proteasome, thereby regulating the actin cytoskeleton and cell migration. Its interaction with RHOB may regulate apoptosis (By similarity). May enhance the PCNA-dependent DNA polymerase delta activity.::Rattus norvegicus (taxid: 10116) confident no hit no match PF02214::BTB_2 99.88::15-105 GO:0005730::nucleolus very confident hh_3drx_A_1::4-85,87-149,151-165 very confident psy968 272 Q7Z5Y7::BTB/POZ domain-containing protein KCTD20 ::::Homo sapiens (taxid: 9606) confident no hit no match PF02214::BTB_2 99.91::168-261 GO:0005737::cytoplasm confident hh_1s1g_A_1::161-194,198-215,218-265 very confident psy15170 233 Q68DU8::BTB/POZ domain-containing protein KCTD16 ::Auxiliary subunit of GABA-B receptors that determine the pharmacology and kinetics of the receptor response. Increases agonist potency and markedly alter the G-protein signaling of the receptors by accelerating onset and promoting desensitization.::Homo sapiens (taxid: 9606) portable no hit no match PF02214::BTB_2 99.93::7-99 GO:0005886::plasma membrane very confident hh_3drx_A_1::3-80,82-106,108-109,124-130,133-152,155-159 very confident psy11394 391 Q09470::Potassium voltage-gated channel subfamily A member 1 ::Mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient.::Homo sapiens (taxid: 9606) confident no hit no match PF02214::BTB_2 99.89::34-124 GO:0008076::voltage-gated potassium channel complex confident bp_1t1d_A_1::32-131 very confident psy4757 169 P17972::Potassium voltage-gated channel protein Shaw ::Mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF02214::BTB_2 99.96::7-97 GO:0030673::axolemma confident hh_3kvt_A_1::1-112 very confident psy13137 164 Q14003::Potassium voltage-gated channel subfamily C member 3 ::This protein mediates the voltage-dependent potassium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a potassium-selective channel through which potassium ions may pass in accordance with their electrochemical gradient.::Homo sapiens (taxid: 9606) confident no hit no match PF02214::BTB_2 99.92::62-149 GO:0030673::axolemma confident hh_3kvt_A_1::56-125,129-149 very confident psy11515 117 Q8BFX3::BTB/POZ domain-containing protein KCTD3 ::::Mus musculus (taxid: 10090) confident no hit no match PF02214::BTB_2 99.95::5-94 GO:0043234::protein complex confident hh_3drx_A_1::2-95 very confident psy194 525 Q01406::Src substrate protein p85 ::Contributes to the organization of the actin cytoskeleton and cell structure. Plays a role in the regulation of cell migration.::Gallus gallus (taxid: 9031) confident no hit no match PF02218::HS1_rep 99.84::121-157 GO:0071345::cellular response to cytokine stimulus confident hh_2yuo_A_1::469-524 very confident psy12056 200 Q9W1W9::PRADC1-like protein ::May be involved in iversification of muscle cell fates.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02225::PA 99.68::47-142 GO:0005576::extracellular region confident hh_3icu_A_1::7-34,36-44,47-107,109-118,122-153 confident psy2157 71 Q29EP6::JNK-interacting protein 3 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK-signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins. Syd is required for efficient kinesin-I mediated axonal transport.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF02239::Cytochrom_D1 91.71::5-64 GO:0008432::JUN kinase binding confident hh_4ggc_A_1::5-18,20-58 portable psy17511 466 P61291::Proteasome activator complex subunit 3 ::Subunit of the 11S REG-gamma (also called PA28-gamma) proteasome regulator, a doughnut-shaped homoheptamer which associates with the proteasome. 11S REG-gamma activates the trypsin-like catalytic subunit of the proteasome but inhibits the chymotrypsin-like and postglutamyl-preferring (PGPH) subunits. Facilitates the MDM2-p53/TP53 interaction which promotes ubiquitination- and MDM2-dependent proteasomal degradation of p53/TP53, limiting its accumulation and resulting in inhibited apoptosis after DNA damage. May also be involved in cell cycle regulation.::Sus scrofa (taxid: 9823) portable no hit no match PF02252::PA28_beta 100.00::331-464 GO:0061133::endopeptidase activator activity confident hh_1avo_B_1::334-464 very confident psy7155 169 B2GV50::DNA-binding protein RFX2 ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF02257::RFX_DNA_binding 100.00::87-163 GO:0000790::nuclear chromatin confident hh_1dp7_P_1::88-162 very confident psy7163 544 Q0V9K5::Transcription factor RFX3 ::Transcription factor required for ciliogenesis and islet cell differentiation during endocrine pancreas development.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF02257::RFX_DNA_binding 98.55::22-43 GO:0048468::cell development confident hh_1dp7_P_1::22-42 portable psy9197 154 Q13191::E3 ubiquitin-protein ligase CBL-B ::E3 ubiquitin-protein ligase which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, and transfers it to substrates, generally promoting their degradation by the proteasome. Negatively regulates TCR (T-cell receptor), BCR (B-cell receptor) and FCER1 (high affinity immunoglobulin epsilon receptor) signal transduction pathways. In naive T-cells, inhibits VAV1 activation upon TCR engagement and imposes a requirement for CD28 costimulation for proliferation and IL-2 production. Also acts by promoting PIK3R1/p85 ubiquitination, which impairs its recruitment to the TCR and subsequent activation. In activated T-cells, inhibits PLCG1 activation and calcium mobilization upon restimulation and promotes anergy. In B-cells, acts by ubiquitinating SYK and promoting its proteasomal degradation. May also be involved in EGFR ubiquitination and internalization.::Homo sapiens (taxid: 9606) confident no hit no match PF02262::Cbl_N 100.00::5-133 GO:0005938::cell cortex confident hh_3bux_B_1::2-154 very confident psy18031 136 P00129::Cytochrome b-c1 complex subunit 7 ::This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.::Bos taurus (taxid: 9913) confident no hit no match PF02271::UCR_14kD 100.00::33-131 GO:0032403::protein complex binding confident hh_1pp9_F_1::33-135 very confident psy18030 121 P00129::Cytochrome b-c1 complex subunit 7 ::This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This component is involved in redox-linked proton pumping.::Bos taurus (taxid: 9913) confident no hit no match PF02271::UCR_14kD 100.00::20-116 GO:0032403::protein complex binding confident hh_1pp9_F_1::19-120 very confident psy3153 89 Q94514::Cytochrome c oxidase subunit 5A, mitochondrial ::This is the heme A-containing chain of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02284::COX5A 100.00::1-77 GO:0005739::mitochondrion confident hh_2y69_E_1::1-46,48-78 very confident psy9569 156 Q94514::Cytochrome c oxidase subunit 5A, mitochondrial ::This is the heme A-containing chain of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF02284::COX5A 100.00::37-145 GO:0005743::mitochondrial inner membrane confident hh_2y69_E_1::24-114,116-146 very confident psy17942 90 Q8BGD8::Cytochrome c oxidase assembly factor 6 homolog ::::Mus musculus (taxid: 10090) confident no hit no match PF02297::COX6B 99.95::1-65 GO:0004129::cytochrome-c oxidase activity confident hh_1v54_H_1::1-65 very confident psy7278 106 no hit no match no hit no match PF02297::COX6B 99.91::37-97 GO:0005758::mitochondrial intermembrane space confident hh_1v54_H_1::27-101 very confident psy455 58 Q24040::Protein big brother ::Regulates the DNA-binding properties of Runt.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02312::CBF_beta 99.96::1-56 GO:0035206::regulation of hemocyte proliferation confident hh_1e50_B_1::1-33 very confident psy445 142 Q24040::Protein big brother ::Regulates the DNA-binding properties of Runt.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02312::CBF_beta 100.00::39-138 GO:0035206::regulation of hemocyte proliferation confident hh_1e50_B_1::40-138 very confident psy5308 137 Q9JIS1::Regulating synaptic membrane exocytosis protein 2 ::Rab effector involved in exocytosis. May act as scaffold protein.::Rattus norvegicus (taxid: 10116) confident no hit no match PF02318::FYVE_2 99.96::23-130 GO:0048786::presynaptic active zone confident hh_1zbd_B_1::18-65,75-76,78-130 very confident psy6193 122 Q9UQ26::Regulating synaptic membrane exocytosis protein 2 ::Rab effector involved in exocytosis. May act as scaffold protein.::Homo sapiens (taxid: 9606) portable no hit no match PF02318::FYVE_2 99.90::23-85 GO:0048786::presynaptic active zone confident hh_2zet_C_1::11-88 very confident psy15639 135 no hit no match no hit no match PF02318::FYVE_2 97.89::10-68 GO:0048786::presynaptic active zone confident hh_2csz_A_1::11-46,53-63 confident psy8797 122 Q27368::Transcription factor E2f ::Transcriptional activator that binds to E2f sites. Required for wild-type growth in mitotic and polytene tissues, Contributes to the expression of replication genes at the G1-S transition and Cyclin E. Activates cell proliferation in wing imaginal disk, which requires expression of vg.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02319::E2F_TDP 99.94::57-122 GO:0071363::cellular response to growth factor stimulus confident hh_1cf7_A_1::54-122 very confident psy15525 112 P07919::Cytochrome b-c1 complex subunit 6, mitochondrial ::This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1.::Homo sapiens (taxid: 9606) portable no hit no match PF02320::UCR_hinge 100.00::49-112 GO:0032403::protein complex binding confident hh_3tgu_H_1::44-112 very confident psy16911 194 Q21018::Conserved regulator of innate immunity protein 3 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF02330::MAM33 100.00::8-192 GO:0003714::transcription corepressor activity confident hh_1p32_A_1::1-134,136-194 very confident psy5991 223 B1H2Q2::Ubiquitin thioesterase zranb1 ::Positive regulator of the Wnt signaling pathway that specifically cleaves 'Lys-63'-linked ubiquitin chains. Acts by deubiquitinating APC protein, a negative regulator of Wnt-mediated transcription. May play a role in the regulation of cell morphology and cytoskeletal organization. Required in the stress fiber dynamics and cell migration.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF02338::OTU 99.50::104-206 GO:0030177::positive regulation of Wnt receptor signaling pathway confident hh_3zrh_A_1::21-61,86-223 very confident psy17336 28 no hit no match no hit no match PF02373::JmjC 98.76::1-28 GO:0005719::nuclear euchromatin confident hh_2ox0_A_1::1-28 very confident psy8915 220 Q5F363::Protein Jumonji ::Regulator of histone methyltransferase complexes that plays an essential role in embryonic development. Acts by modulating histone methyltransferase activity and promoting the recruitment of histone methyltransferase complexes to their target genes. Binds DNA and mediates the recruitment of the PRC2 complex to target genes in embryonic stem cells. Does not have histone demethylase activity but regulates activity of various histone methyltransferase complexes. In embryonic stem cells, it associates with the PRC2 complex and inhibits trimethylation of 'Lys-27' of histone H3 (H3K27me3) by the PRC2 complex, thereby playing a key role in differentiation of embryonic stem cells and normal development.::Gallus gallus (taxid: 9031) portable no hit no match PF02373::JmjC 99.96::93-194 GO:0005737::cytoplasm confident hh_3dxt_A_1::7-15,17-34,38-45,50-56,63-134,136-210 very confident psy9595 232 Q9V6L0::Probable lysine-specific demethylase 4B ::Probable histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02375::JmjN 99.66::74-108 GO:0008284::positive regulation of cell proliferation confident hh_3dxt_A_1::59-119,124-232 very confident psy3393 433 O08755::Hepatocyte nuclear factor 6 ::Transcriptional activator. Binds the consensus sequence 5'-DHWATTGAYTWWD-3' on a variety of gene promoters such as those of HNF3B and TTR. Important for liver genes transcription. Stimulates the expression of Onecut3 in the developing endoderm.::Mus musculus (taxid: 10090) confident no hit no match PF02376::CUT 99.97::350-431 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident hh_1x2l_A_1::346-420,423-431 very confident psy14223 173 Q68DN1::Uncharacterized protein C2orf16 ::::Homo sapiens (taxid: 9606) portable no hit no match PF02389::Cornifin 96.57::53-168 GO:0071230::cellular response to amino acid stimulus confident rp_1jmo_A_2::14-47,49-70,72-110 portable psy2035 141 Q9R0G6::Cartilage oligomeric matrix protein ::May play a role in the structural integrity of cartilage via its interaction with other extracellular matrix proteins such as the collagens and fibronectin. Can mediate the interaction of chondrocytes with the cartilage extracellular matrix through interaction with cell surface integrin receptors. Could play a role in the pathogenesis of osteoarthritis. Potent suppressor of apoptosis in both primary chondrocytes and transformed cells. Suppresses apoptosis by blocking the activation of caspase-3 and by inducing the IAP family of survival proteins (BIRC3, BIRC2, BIRC5 and XIAP). Essential for maintaining a vascular smooth muscle cells (VSMCs) contractile/differentiated phenotype under physiological and pathological stimuli. Maintains this phenotype of VSMCs by interacting with ITGA7.::Mus musculus (taxid: 10090) portable no hit no match PF02412::TSP_3 99.30::13-48 GO:0008201::heparin binding confident hh_1ux6_A_1::1-61,64-75,77-98 very confident psy6218 533 Q6ZQ11::Chondroitin sulfate synthase 1 ::Has both beta-1,3-glucuronic acid and beta-1,4-N-acetylgalactosamine transferase activity. Transfers glucuronic acid (GlcUA) from UDP-GlcUA and N-acetylgalactosamine (GalNAc) from UDP-GalNAc to the non-reducing end of the elongating chondroitin polymer.::Mus musculus (taxid: 10090) confident no hit no match PF02434::Fringe 99.96::332-527 GO:0005576::extracellular region confident hh_2j0a_A_1::331-374,381-410,414-527 confident psy2488 142 Q24342::Fringe glycosyltransferase ::Glycosyltransferase involved in the elongation of O-linked ligands to activate Notch signaling. Possesses fucose-specific beta-1,3-N-acetylglucosaminyltransferase activity; extends the O-linked fucose on the Notch EGF repeats. Boundary-specific cell-signaling molecule that is responsible for dorsal-ventral cell interactions during wing development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02434::Fringe 100.00::1-141 GO:0007450::dorsal/ventral pattern formation, imaginal disc confident hh_2j0a_A_1::1-23,27-122,124-141 very confident psy5591 198 Q9NS00::Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 ::Glycosyltransferase that generates the core 1 O-glycan Gal-beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins. Plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development.::Homo sapiens (taxid: 9606) confident no hit no match PF02434::Fringe 99.70::111-198 GO:0009247::glycolipid biosynthetic process confident hh_2j0a_A_1::111-182,186-198 confident psy17279 198 Q6IFY7::Reticulon-1-A ::May be involved in neuroendocrine secretion or in membrane trafficking in neuroendocrine cells.::Xenopus laevis (taxid: 8355) portable no hit no match PF02453::Reticulon 100.00::24-194 GO:0005789::endoplasmic reticulum membrane confident hh_2ko2_A_1::71-139 very confident psy17282 60 no hit no match no hit no match PF02453::Reticulon 99.21::2-40 GO:0044432::endoplasmic reticulum part confident no hit no match psy10743 128 no hit no match no hit no match PF02460::Patched 97.48::56-110 GO:0016328::lateral plasma membrane confident no hit no match psy16837 204 P18502::Protein patched ::Segmentation polarity protein. Acts as a receptor for the hedgehog protein (HH). Associates with the smoothened protein (SMO) to transduce the hedgehog signal leading to the activation of wingless, decapentaplegic and patched itself. Participates in cell interactions that establish pattern within the segment and the imaginal disks during development. In the absence of HH, represses the constitutive signaling activity of smo through fused (FU).::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02460::Patched 96.99::98-168 GO:0048471::perinuclear region of cytoplasm confident no hit no match psy6303 270 Q7KVA1::Xylosyltransferase oxt ::Catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02485::Branch 100.00::17-270 GO:0050650::chondroitin sulfate proteoglycan biosynthetic process confident hh_2gak_A_1::15-28,35-139,142-143,146-146,149-152,158-163,174-176,190-190,203-211,223-248,252-270 very confident psy833 642 Q4LDE5::Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 ::May play a role in the cell attachment process.::Homo sapiens (taxid: 9606) portable no hit no match PF02494::HYR 99.52::489-572 GO:0016324::apical plasma membrane confident hh_2gsx_A_1::116-120,122-154,160-194,209-234,240-258,260-280,285-294,296-341,360-401,406-418,420-461,464-474,480-491,498-506,511-512,518-518,526-534,537-556,558-562,573-594,601-603,610-633,635-640 very confident psy14468 108 Q6P6Q6::mTERF domain-containing protein 1, mitochondrial ::Binds promoter DNA and regulates initiation of transcription. Required for normal mitochondrial transcription, and for normal assembly of mitochondrial respiratory complexes. Required for normal mitochondrial function.::Rattus norvegicus (taxid: 10116) portable no hit no match PF02536::mTERF 99.33::9-91 GO:0005739::mitochondrion confident hh_4fp9_B_1::10-41,43-108 very confident psy10187 78 Q99190::Very-long-chain enoyl-CoA reductase ::Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long chain fatty acids (VLCFA) from palmitate. Catalyzes the last step in each elongation cycle that lengthens palmitate by two carbon units. VLCFAs serve as precursors for ceramide and sphingolipids. Required for normal biogenesis of piecemeal microautophagy of the nucleus (PMN) bleps and vesicles during nutrient stress.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) confident no hit no match PF02544::Steroid_dh 97.12::29-75 GO:0030176::integral to endoplasmic reticulum membrane confident no hit no match psy17564 109 Q55GA4::Cell division control protein 45 homolog ::Required for initiation of chromosomal DNA replication.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF02724::CDC45 99.97::1-109 GO:0044446::intracellular organelle part confident no hit no match psy176 101 Q9I8D1::Unconventional myosin-VI ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Myosin 6 is a reverse-direction motor protein that moves towards the minus-end of actin filaments. Has slow rate of actin-activated ADP release due to weak ATP binding. Functions in a variety of intracellular processes such as vesicular membrane trafficking and cell migration. Required for the structural integrity of the Golgi apparatus via the p53-dependent pro-survival pathway. Appears to be involved in a very early step of clathrin-mediated endocytosis in polarized epithelial cells. May act as a regulator of F-actin dynamics. May play a role in transporting DAB2 from the plasma membrane to specific cellular targets.::Gallus gallus (taxid: 9031) portable no hit no match PF02736::Myosin_N 99.35::41-84 GO:0043234::protein complex confident hh_4anj_A_1::38-101 very confident psy10650 446 Q8NCT1::Arrestin domain-containing protein 4 ::::Homo sapiens (taxid: 9606) portable no hit no match PF02752::Arrestin_C 99.84::280-409 GO:0010629::negative regulation of gene expression confident no hit no match psy16524 453 P19107::Phosrestin-1 ::Probably plays an important role in the photoreceptor transduction.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02752::Arrestin_C 99.71::246-403 GO:0016029::subrhabdomeral cisterna confident hh_3ugu_A_1::2-159,222-232,234-311,314-363,365-409 very confident psy2082 314 P15372::Phosrestin-2 ::Regulates photoreceptor cell deactivation. Arr1 and Arr2 proteins are mediators of rhodopsin inactivation and are essential for the termination of the phototransduction cascade.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF02752::Arrestin_C 99.75::193-302 GO:0032947::protein complex scaffold confident hh_1g4m_A_1::3-305 very confident psy14900 245 Q9ULH7::MKL/myocardin-like protein 2 ::Acts as a transcriptional coactivator of serum response factor (SRF). Required for skeletal myogenic differentiation.::Homo sapiens (taxid: 9606) portable no hit no match PF02755::RPEL 98.57::116-141 GO:0001105::RNA polymerase II transcription coactivator activity confident hh_3tpm_B_1::19-41,45-92,97-142 very confident psy17394 163 O75167::Phosphatase and actin regulator 2 ::::Homo sapiens (taxid: 9606) confident no hit no match PF02755::RPEL 98.91::48-72 GO:0005737::cytoplasm confident hh_4b1z_M_1::2-115 very confident psy3259 69 Q6ZUT9::DENN domain-containing protein 5B ::::Homo sapiens (taxid: 9606) confident no hit no match PF02759::RUN 97.51::29-61 GO:0005794::Golgi apparatus confident hh_4giw_A_1::13-25,28-61 portable psy16433 297 Q9BXF3::Cat eye syndrome critical region protein 2 ::Part of the CERF (CECR2-containing-remodeling factor) complex, which facilitates the perturbation of chromatin structure in an ATP-dependent manner. May be involved through its interaction with LRPPRC in the integration of cytoskeletal network with vesicular trafficking, nucleocytosolic shuttling, transcription, chromosome remodeling and cytokinesis.::Homo sapiens (taxid: 9606) portable no hit no match PF02791::DDT 98.47::9-64 GO:0090537::CERF complex confident hh_2y9y_B_1::9-137,141-157 portable psy701 158 Q3ZBV3::Protein mago nashi homolog ::Component of a splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junction on mRNAs. The EJC is a dynamic structure consisting of a few core proteins and several more peripheral nuclear and cytoplasmic associated factors that join the complex only transiently either during EJC assembly or during subsequent mRNA metabolism. Core components of the EJC, that remains bound to spliced mRNAs throughout all stages of mRNA metabolism, functions to mark the position of the exon-exon junction in the mature mRNA and thereby influences downstream processes of gene expression including mRNA splicing, nuclear mRNA export, subcellular mRNA localization, translation efficiency and nonsense-mediated mRNA decay (NMD). Remains associated with the mRNA after its export to the cytoplasm and require translation of the mRNA for removal. The heterodimer MAGOH-RBM8A interacts with PYM that function to enhance the translation of EJC-bearing spliced mRNAs by recruiting them to the ribosomal 48S preinitiation complex.::Bos taurus (taxid: 9913) very confident no hit no match PF02792::Mago_nashi 100.00::16-158 GO:0016607::nuclear speck very confident hh_1oo0_A_1::14-158 very confident psy15495 158 Q60755::Calcitonin receptor ::This is a receptor for calcitonin. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. The calcitonin receptor is thought to couple to the heterotrimeric guanosine triphosphate-binding protein that is sensitive to cholera toxin.::Mus musculus (taxid: 10090) portable no hit no match PF02793::HRM 99.75::24-91 GO:0048731::system development confident hh_1u34_A_1::6-14,17-74,82-94 very confident psy6236 358 Q3MIF2::Lethal(3)malignant brain tumor-like protein 2 ::Putative Polycomb group (PcG) protein. PcG proteins maintain the transcriptionally repressive state of genes, probably via a modification of chromatin, rendering it heritably changed in its expressibility. Its association with a chromatin-remodeling complex suggests that it may contribute to prevent expression of genes that trigger the cell into mitosis. Binds to monomethylated and dimethylated 'Lys-20' on histone H4. Binds histone H3 peptides that are monomethylated or dimethylated on 'Lys-4', 'Lys-9' or 'Lys-27'.::Rattus norvegicus (taxid: 10116) portable no hit no match PF02820::MBT 99.94::1-70 GO:0005634::nucleus confident hh_2biv_A_1::44-90,101-135,240-249,254-259,261-355 very confident psy15287 186 D3ZWK4::Lethal(3)malignant brain tumor-like protein 1 ::Polycomb group (PcG) protein that specifically recognizes and binds mono- and dimethyllysine residues on target proteins, therey acting as a 'reader' of a network of post-translational modifications. PcG proteins maintain the transcriptionally repressive state of genes: acts as a chromatin compaction factor by recognizing and binding mono- and dimethylated histone H1b/HIST1H1E at 'Lys-26' (H1bK26me1 and H1bK26me2) and histone H4 at 'Lys-20' (H4K20me1 and H4K20me2), leading to condense chromatin and repress transcription. Recognizes and binds p53/TP53 monomethylated at 'Lys-382', leading to repress p53/TP53-target genes. Also recognizes and binds RB1/RB monomethylated at 'Lys-860'. Participates in the ETV6-mediated repression. Probably plays a role in cell proliferation. Overexpression induces multinucleated cells, suggesting that it is required to accomplish normal mitosis.::Rattus norvegicus (taxid: 10116) portable no hit no match PF02820::MBT 99.96::106-180 GO:0042393::histone binding confident hh_1oz2_A_1::1-45,50-77,96-115,117-140,143-185 very confident psy6234 260 Q9VK33::Polycomb protein Sfmbt ::Polycomb group (PcG) protein that binds to the Polycomb response elements (PREs) found in the regulatory regions of many genes. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate repression, but to maintain it during later stages of development. They probably act via the methylation of histones, rendering chromatin heritably changed in its expressibility. Necessary but not sufficient to recruit a functional PcG repressive complex that represses target genes, suggesting that the recruitment of the distinct PRC1 complex is also required to allow a subsequent repression.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02820::MBT 99.95::132-201 GO:0044427::chromosomal part confident bp_3h6z_A_1::3-59,61-220,222-228,231-254 very confident psy13658 228 Q23985::Protein deltex ::Regulator of Notch signaling, a signaling pathway involved in cell-cell communications that regulates a broad spectrum of cell-fate determinations. Mainly acts as a positive regulator of Notch, but it may also act as a negative regulator, depending on the developmental and cell context. Mediates the antineural activity of Notch. May function as an ubiquitin ligase protein in the Notch pathway.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02825::WWE 99.82::82-154 GO:0004842::ubiquitin-protein ligase activity confident hh_2a90_A_1::2-14,16-96,98-167 very confident psy12157 148 Q9Y6Y8::SEC23-interacting protein ::Plays a role in the organization of endoplasmic reticulum exit sites.::Homo sapiens (taxid: 9606) portable no hit no match PF02825::WWE 96.32::41-72 GO:0043229::intracellular organelle confident hh_1ujr_A_1::41-49,52-71 portable psy14628 161 Q62915::Peripheral plasma membrane protein CASK ::Multidomain scaffolding protein with a role in synaptic transmembrane protein anchoring and ion channel trafficking. Contributes to neural development and regulation of gene expression via interaction with the transcription factor TRB1. Binds to cell-surface proteins, including amyloid precursor protein, neurexins, and syndecans. May mediate a link between the extracellular matrix and the actin cytoskeleton via its interaction with syndecan and with the actin/spectrin-binding protein 4.1.::Rattus norvegicus (taxid: 10116) portable no hit no match PF02828::L27 98.92::58-112 GO:0044424::intracellular part confident hh_1rso_B_1::55-105 very confident psy8135 295 Q62448::Eukaryotic translation initiation factor 4 gamma 2 ::Appears to play a role in the switch from cap-dependent to IRES-mediated translation during mitosis, apoptosis and viral infection. Cleaved by some caspases and viral proteases.::Mus musculus (taxid: 10090) portable no hit no match PF02854::MIF4G 100.00::26-247 GO:0005829::cytosol confident hh_1hu3_A_1::16-175,184-226,228-253,256-269 very confident psy10998 514 Q76E23::Eukaryotic translation initiation factor 4G ::::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF02854::MIF4G 100.00::185-423 GO:0005829::cytosol confident hh_1hu3_A_1::182-253,260-379,381-399,403-443 very confident psy7793 316 Q9VJ87::Pre-mRNA-splicing factor CWC22 homolog ::May be involved in pre-mRNA splicing.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02854::MIF4G 98.42::12-108 GO:0005829::cytosol confident hh_1h2v_C_1::12-31,33-33,35-69,71-73,75-82,84-111,113-141,150-154,160-179,181-253,256-277,279-281,285-290,292-304 confident psy7791 551 Q6BU84::Pre-mRNA-splicing factor CWC22 ::Involved in pre-mRNA splicing.::Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592) confident no hit no match PF02854::MIF4G 99.93::59-253 GO:0031981::nuclear lumen confident hh_1h2v_C_1::56-195,204-211,216-256,258-286,295-299,305-320,339-339,345-354,356-383,386-396,398-400,407-453,489-513,516-537 very confident psy12155 78 O94830::Phospholipase DDHD2 ::Phospholipase that hydrolyzes preferentially phosphatidic acid and phosphatidylethanolamine. May be involved in the maintenance of the endoplasmic reticulum and/or Golgi structures.::Homo sapiens (taxid: 9606) confident no hit no match PF02862::DDHD 100.00::1-76 GO:0005813::centrosome confident no hit no match psy18227 211 Q8NEL9::Phospholipase DDHD1 ::Probable phospholipase that hydrolyzes phosphatidic acid. The different isoforms may change the substrate specificity.::Homo sapiens (taxid: 9606) portable no hit no match PF02862::DDHD 100.00::2-190 GO:0005813::centrosome confident no hit no match psy12530 189 P70606::Small conductance calcium-activated potassium channel protein 1 ::Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.::Rattus norvegicus (taxid: 10116) confident no hit no match PF02888::CaMBD 99.81::112-189 GO:0016057::regulation of membrane potential in photoreceptor cell confident hh_3sjq_C_1::111-136,166-189 very confident psy8646 191 Q5REB9::Myotubularin-related protein 2 ::Phosphatase that acts on lipids with a phosphoinositol headgroup. Has phosphatase activity towards phosphatidylinositol 3-phosphate and phosphatidylinositol 3,5-bisphosphate.::Pongo abelii (taxid: 9601) portable no hit no match PF02893::GRAM 98.03::59-118 GO:0043229::intracellular organelle confident hh_1lw3_A_1::1-138,140-161,165-170,172-190 very confident psy5865 113 Q6ZPE2::Myotubularin-related protein 5 ::Probable pseudophosphatase. Lacks several amino acids in the catalytic pocket which renders it catalytically inactive as a phosphatase. The pocket is however sufficiently preserved to bind phosphorylated substrates, and maybe protect them from phosphatases. Inhibits myoblast differentiation in vitro and induces oncogenic transformation in fibroblasts.::Mus musculus (taxid: 10090) confident no hit no match PF02893::GRAM 96.85::36-81 GO:0055037::recycling endosome confident hh_1zsq_A_1::10-18,20-25,27-31,37-59,65-83,86-86,88-112 confident psy16369 101 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF02913::FAD-oxidase_C 95.64::37-98 GO:0071949::FAD binding confident hh_4bby_A_1::29-36,38-99 confident psy16486 150 Q9EQR2::Alkyldihydroxyacetonephosphate synthase, peroxisomal ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF02913::FAD-oxidase_C 98.42::1-107 GO:0071949::FAD binding confident hh_4bby_A_1::1-97 very confident psy5812 365 Q08832::Gamma-aminobutyric acid receptor subunit beta-like ::GABA, an inhibitory neurotransmitter, mediates neuronal inhibition by binding to the GABA receptor and opening an integral chloride channel. Combines with the ligand-gated ion channel subunit GRD to form cation-selective GABA-gated ion channels when coexpressed in Xenopus laevis oocytes.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF02931::Neur_chan_LBD 100.00::46-250 GO:0005829::cytosol confident hh_4aq5_B_1::43-146,149-233,235-278,280-354 very confident psy1864 232 Q94900::Glutamate-gated chloride channel ::Glutamate gated chloride channel that is dual gated by glutamate and avermectin.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02931::Neur_chan_LBD 99.97::1-222 GO:0005886::plasma membrane confident hh_3rhw_A_1::1-75,135-231 very confident psy12043 143 Q5IS76::Neuronal acetylcholine receptor subunit alpha-6 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.::Pan troglodytes (taxid: 9598) portable no hit no match PF02931::Neur_chan_LBD 100.00::5-141 GO:0005892::acetylcholine-gated channel complex confident hh_2wn9_A_1::4-64,67-99,104-141 very confident psy14129 160 Q5IS76::Neuronal acetylcholine receptor subunit alpha-6 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.::Pan troglodytes (taxid: 9598) portable no hit no match PF02931::Neur_chan_LBD 100.00::4-143 GO:0005892::acetylcholine-gated channel complex confident hh_2qc1_B_1::5-76,78-153 very confident psy7197 488 Q8R4G9::Neuronal acetylcholine receptor subunit alpha-3 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.::Mus musculus (taxid: 10090) confident no hit no match PF02931::Neur_chan_LBD 99.97::2-171 GO:0005892::acetylcholine-gated channel complex confident hh_1oed_A_1::171-216,245-325,335-340,343-343,347-349,353-356,358-359,363-363,368-370,373-409,419-422,431-458 very confident psy16244 86 Q9N587::Acetylcholine receptor subunit alpha-type unc-63 ::Acetylcholine receptor.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF02931::Neur_chan_LBD 99.89::1-83 GO:0005892::acetylcholine-gated channel complex confident hh_2qc1_B_1::1-85 very confident psy7429 555 Q9N587::Acetylcholine receptor subunit alpha-type unc-63 ::Acetylcholine receptor.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF02931::Neur_chan_LBD 100.00::35-265 GO:0005892::acetylcholine-gated channel complex confident hh_2qc1_B_1::32-82,98-209,219-265 very confident psy16246 118 Q9N587::Acetylcholine receptor subunit alpha-type unc-63 ::Acetylcholine receptor.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF02931::Neur_chan_LBD 99.63::42-117 GO:0005892::acetylcholine-gated channel complex confident hh_2qc1_B_1::42-117 very confident psy6970 148 Q61603::Glycine receptor subunit alpha-4 ::The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing). May play a role in the maturation of reproductive organs.::Mus musculus (taxid: 10090) portable no hit no match PF02931::Neur_chan_LBD 99.97::1-117 GO:0007268::synaptic transmission confident hh_3rhw_A_1::1-19,21-54,56-116,118-126,128-139 very confident psy5854 392 P24524::Glycine receptor subunit alpha-3 ::The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing).::Rattus norvegicus (taxid: 10116) confident no hit no match PF02931::Neur_chan_LBD 99.90::174-313 GO:0016917::GABA receptor activity confident hh_3rhw_A_1::1-172 very confident psy7487 439 P25123::Gamma-aminobutyric acid receptor subunit beta ::GABA, an inhibitory neurotransmitter, mediates neuronal inhibition by binding to the GABA receptor and opening an integral chloride channel.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02931::Neur_chan_LBD 100.00::2-178 GO:0030424::axon confident rp_3rhw_A_1::11-247 very confident psy4842 95 P18506::Gamma-aminobutyric acid receptor subunit delta ::GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel.::Rattus norvegicus (taxid: 10116) portable no hit no match PF02931::Neur_chan_LBD 99.96::1-95 GO:0042221::response to chemical stimulus confident hh_2qc1_B_1::1-15,17-48,51-95 very confident psy12705 204 P22771::Glycine receptor subunit alpha-2 ::The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing).::Rattus norvegicus (taxid: 10116) portable no hit no match PF02931::Neur_chan_LBD 99.82::2-95 GO:0042221::response to chemical stimulus confident hh_3rhw_A_1::2-49,52-204 very confident psy10725 160 P28473::Gamma-aminobutyric acid receptor subunit gamma-3 ::GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel.::Rattus norvegicus (taxid: 10116) portable no hit no match PF02931::Neur_chan_LBD 99.71::6-114 GO:0042221::response to chemical stimulus confident hh_3rhw_A_1::7-51,55-126 very confident psy5811 329 P24524::Glycine receptor subunit alpha-3 ::The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing).::Rattus norvegicus (taxid: 10116) portable no hit no match PF02931::Neur_chan_LBD 99.74::81-188 GO:0043025::neuronal cell body confident no hit no match psy12313 488 P16305::Gamma-aminobutyric acid receptor subunit alpha-6 ::GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel.::Mus musculus (taxid: 10090) confident no hit no match PF02931::Neur_chan_LBD 100.00::173-379 GO:0043235::receptor complex confident hh_3rhw_A_1::173-247,250-482 very confident psy3030 116 P25162::Acetylcholine receptor subunit beta-like 2 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02932::Neur_chan_memb 99.31::21-81 GO:0005892::acetylcholine-gated channel complex confident hh_1oed_A_1::24-84 very confident psy8685 70 Q866A2::Neuronal acetylcholine receptor subunit alpha-7 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. The channel is blocked by alpha-bungarotoxin.::Macaca mulatta (taxid: 9544) confident no hit no match PF02932::Neur_chan_memb 98.98::37-70 GO:0005892::acetylcholine-gated channel complex confident hh_1oed_A_1::30-70 very confident psy8686 176 Q866A2::Neuronal acetylcholine receptor subunit alpha-7 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. The channel is blocked by alpha-bungarotoxin.::Macaca mulatta (taxid: 9544) portable no hit no match PF02932::Neur_chan_memb 99.68::73-174 GO:0005892::acetylcholine-gated channel complex confident hh_4aq5_A_1::2-14,16-32,36-100,131-175 very confident psy18229 111 Q866A2::Neuronal acetylcholine receptor subunit alpha-7 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. The channel is blocked by alpha-bungarotoxin.::Macaca mulatta (taxid: 9544) portable no hit no match PF02932::Neur_chan_memb 98.69::1-52 GO:0005892::acetylcholine-gated channel complex confident hh_4aq5_B_1::1-51 very confident psy17845 81 Q9N587::Acetylcholine receptor subunit alpha-type unc-63 ::Acetylcholine receptor.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF02932::Neur_chan_memb 98.98::2-46 GO:0005892::acetylcholine-gated channel complex confident hh_1oed_A_1::1-49 very confident psy10144 88 P23416::Glycine receptor subunit alpha-2 ::The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing).::Homo sapiens (taxid: 9606) confident no hit no match PF02932::Neur_chan_memb 99.82::13-76 GO:0009605::response to external stimulus confident hh_3rhw_A_1::3-55,59-76 very confident psy15134 259 Q61603::Glycine receptor subunit alpha-4 ::The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing). May play a role in the maturation of reproductive organs.::Mus musculus (taxid: 10090) portable no hit no match PF02932::Neur_chan_memb 99.94::99-180 GO:0009605::response to external stimulus confident hh_3rhw_A_1::14-186,228-258 very confident psy16242 383 Q9N587::Acetylcholine receptor subunit alpha-type unc-63 ::Acetylcholine receptor.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF02932::Neur_chan_memb 100.00::115-350 GO:0015464::acetylcholine receptor activity confident hh_1oed_A_1::108-234,240-241,245-251,253-253,256-259,261-261,264-265,270-270,273-279,284-312,319-352 very confident psy11695 190 Q866A2::Neuronal acetylcholine receptor subunit alpha-7 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane. The channel is blocked by alpha-bungarotoxin.::Macaca mulatta (taxid: 9544) portable no hit no match PF02932::Neur_chan_memb 99.91::1-181 GO:0016021::integral to membrane confident hh_1oed_A_1::1-54,61-64,66-67,70-73,75-75,89-90,95-99,102-105,107-108,114-114,119-183 very confident psy6972 133 P22771::Glycine receptor subunit alpha-2 ::The glycine receptor is a neurotransmitter-gated ion channel. Binding of glycine to its receptor increases the chloride conductance and thus produces hyperpolarization (inhibition of neuronal firing).::Rattus norvegicus (taxid: 10116) portable no hit no match PF02932::Neur_chan_memb 99.88::22-104 GO:0022008::neurogenesis confident hh_3rhw_A_1::1-107 very confident psy13804 129 P25123::Gamma-aminobutyric acid receptor subunit beta ::GABA, an inhibitory neurotransmitter, mediates neuronal inhibition by binding to the GABA receptor and opening an integral chloride channel.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02932::Neur_chan_memb 98.72::81-108 GO:0030424::axon confident hh_3tlw_A_1::86-112 confident psy12319 161 Q5R6B2::Gamma-aminobutyric acid receptor subunit alpha-1 ::GABA, the major inhibitory neurotransmitter in the vertebrate brain, mediates neuronal inhibition by binding to the GABA/benzodiazepine receptor and opening an integral chloride channel.::Pongo abelii (taxid: 9601) portable no hit no match PF02932::Neur_chan_memb 99.13::114-141 GO:0044464::cell part confident hh_3tlw_A_1::118-145 confident psy11698 197 P04755::Acetylcholine receptor subunit beta-like 1 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02932::Neur_chan_memb 99.71::116-175 GO:0045211::postsynaptic membrane confident hh_1oed_A_1::118-177 very confident psy11692 171 P04755::Acetylcholine receptor subunit beta-like 1 ::After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF02932::Neur_chan_memb 99.88::74-171 GO:0045211::postsynaptic membrane confident hh_2bg9_A_1::1-20,23-147,149-162 very confident psy4066 69 Q1W0Y2::Cytochrome c oxidase subunit 7C, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Sus scrofa (taxid: 9823) very confident no hit no match PF02935::COX7C 99.97::6-67 GO:0005743::mitochondrial inner membrane confident hh_2y69_L_1::5-67 very confident psy960 83 Q91W29::Cytochrome c oxidase subunit 4 isoform 2, mitochondrial ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Mus musculus (taxid: 10090) confident no hit no match PF02936::COX4 99.93::4-51 GO:0004129::cytochrome-c oxidase activity confident hh_2y69_D_1::4-52 very confident psy2997 415 O46577::Cytochrome c oxidase subunit 4 isoform 1, mitochondrial (Fragment) ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Pan troglodytes (taxid: 9598) portable no hit no match PF02936::COX4 100.00::46-191 GO:0005739::mitochondrion confident hh_2y69_D_2::219-297,302-318,334-390 very confident psy516 80 P04038::Cytochrome c oxidase subunit 6C ::This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.::Bos taurus (taxid: 9913) confident no hit no match PF02937::COX6C 100.00::7-79 GO:0004129::cytochrome-c oxidase activity confident hh_1v54_I_1::7-79 very confident psy1834 101 O14949::Cytochrome b-c1 complex subunit 8 ::This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This subunit, together with cytochrome b, binds to ubiquinone.::Homo sapiens (taxid: 9606) confident no hit no match PF02939::UcrQ 100.00::19-100 GO:0005743::mitochondrial inner membrane confident hh_1pp9_G_1::19-20,22-27,29-101 very confident psy16108 94 Q17754::Mitochondrial import inner membrane translocase subunit Tim9 ::Mitochondrial intermembrane chaperone that participates in the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. May also be required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF02953::zf-Tim10_DDP 99.90::17-76 GO:0005215::transporter activity confident hh_2bsk_A_1::13-90 very confident psy1167 99 Q6P321::Mitochondrial import inner membrane translocase subunit Tim10 ::Mitochondrial intermembrane chaperone that participates in the import and insertion of multi-pass transmembrane proteins into the mitochondrial inner membrane. May also be required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space.::Xenopus tropicalis (taxid: 8364) very confident no hit no match PF02953::zf-Tim10_DDP 99.91::13-78 GO:0005215::transporter activity very confident hh_3dxr_B_1::7-14,16-80 very confident psy11816 209 Q09783::Mitochondrial import inner membrane translocase subunit tim8 ::Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The TIM8-TIM13 complex is non essential and only mediates the import of few proteins, while the predominant TIM9-TIM10 70 kDa complex is crucial and mediates the import of much more proteins.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF02953::zf-Tim10_DDP 99.81::74-132 GO:0005739::mitochondrion confident hh_3cjh_B_1::75-132 very confident psy13362 216 Q9Y1A3::Mitochondrial import inner membrane translocase subunit Tim8 ::Mitochondrial intermembrane chaperone that participates in the import and insertion of some multi-pass transmembrane proteins into the mitochondrial inner membrane. Also required for the transfer of beta-barrel precursors from the TOM complex to the sorting and assembly machinery (SAM complex) of the outer membrane. Acts as a chaperone-like protein that protects the hydrophobic precursors from aggregation and guide them through the mitochondrial intermembrane space. The Tim8-Tim13 complex mediates the import of some proteins while the predominant Tim9-Tim10 70 kDa complex mediates the import of much more proteins.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02953::zf-Tim10_DDP 99.85::146-211 GO:0005758::mitochondrial intermembrane space confident hh_3cjh_B_1::149-211 very confident psy6808 132 Q5RBU9::Barrier-to-autointegration factor ::Plays fundamental roles in nuclear assembly, chromatin organization, gene expression and gonad development. May potently compress chromatin structure and be involved in membrane recruitment and chromatin decondensation during nuclear assembly. Contains 2 non-specific dsDNA-binding sites which may promote DNA cross-bridging.::Pongo abelii (taxid: 9601) confident no hit no match PF02961::BAF 99.96::27-73 GO:0005635::nuclear envelope confident hh_1ci4_A_1::28-73 very confident psy13695 111 Q6PEC1::Tubulin-specific chaperone A ::Tubulin-folding protein; involved in the early step of the tubulin folding pathway.::Rattus norvegicus (taxid: 10116) very confident no hit no match PF02970::TBCA 100.00::8-97 GO:0005829::cytosol confident hh_1h7c_A_1::1-107 very confident psy13328 68 O60763::General vesicular transport factor p115 ::General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity.::Homo sapiens (taxid: 9606) confident no hit no match PF02985::HEAT 94.65::39-67 GO:0005829::cytosol confident hh_3grl_A_1::14-68 very confident psy14017 115 P36179::Serine/threonine-protein phosphatase PP2A 65 kDa regulatory subunit ::The PR65 subunit of protein phosphatase 2A serves as a scaffolding molecule to coordinate the assembly of the catalytic subunit and a variable regulatory B subunit.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF02985::HEAT 98.09::67-96 GO:0005829::cytosol confident bp_1b3u_A_1::54-114 very confident psy17181 75 Q9ET30::Transmembrane 9 superfamily member 3 ::::Mus musculus (taxid: 10090) confident no hit no match PF02990::EMP70 95.73::5-33 GO:0005774::vacuolar membrane confident no hit no match psy9825 280 Q9ET30::Transmembrane 9 superfamily member 3 ::::Mus musculus (taxid: 10090) confident no hit no match PF02990::EMP70 100.00::52-280 GO:0005774::vacuolar membrane confident no hit no match psy17179 533 Q54ZW0::Putative phagocytic receptor 1b ::Involved in adhesion and phagocytosis of hydrophilic particles.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF02990::EMP70 100.00::9-491 GO:0005794::Golgi apparatus confident no hit no match psy3723 253 Q5RDY2::Transmembrane 9 superfamily member 4 ::::Pongo abelii (taxid: 9601) confident no hit no match PF02990::EMP70 100.00::3-252 GO:0005794::Golgi apparatus confident no hit no match psy17177 105 Q9ET30::Transmembrane 9 superfamily member 3 ::::Mus musculus (taxid: 10090) confident no hit no match PF02990::EMP70 99.95::1-104 GO:0005797::Golgi medial cisterna confident no hit no match psy11431 590 Q99805::Transmembrane 9 superfamily member 2 ::In the intracellular compartments, may function as a channel or small molecule transporter.::Homo sapiens (taxid: 9606) very confident no hit no match PF02990::EMP70 100.00::1-554 GO:0005887::integral to plasma membrane confident no hit no match psy17180 130 Q9ET30::Transmembrane 9 superfamily member 3 ::::Mus musculus (taxid: 10090) confident no hit no match PF02990::EMP70 100.00::2-121 GO:0016021::integral to membrane confident no hit no match psy8038 157 Q8MK68::Gamma-aminobutyric acid receptor-associated protein ::May play a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match PF02991::Atg8 100.00::13-153 GO:0000421::autophagic vacuole membrane very confident hh_3m95_A_1::1-96,134-154 very confident psy6336 73 Q8MK68::Gamma-aminobutyric acid receptor-associated protein ::May play a role in intracellular transport of GABA(A) receptors and its interaction with the cytoskeleton. Involved in apoptosis.::Oryctolagus cuniculus (taxid: 9986) very confident no hit no match PF02991::Atg8 100.00::2-72 GO:0000421::autophagic vacuole membrane very confident hh_3m95_A_1::2-73 very confident psy12247 119 Q09490::Protein lgg-1 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF02991::Atg8 100.00::13-117 GO:0005829::cytosol very confident hh_3h9d_A_1::3-83,85-117 very confident psy7717 113 Q86CR6::Ubiquitin-like protein atg12 ::Ubiquitin-like protein involved in autophagy vesicles formation. Required for atg8 association to the vesicle membranes. Conjugated to atg5 through an ubiquitin-like conjugating system involving also atg7 as an E1-like activating enzyme is essential for its function.::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF02991::Atg8 100.00::17-113 GO:0005829::cytosol confident hh_1wz3_A_1::24-68,72-113 very confident psy12187 112 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable no hit no match PF03015::Sterile 99.98::10-95 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident no hit no match psy13103 162 Q96K12::Fatty acyl-CoA reductase 2 ::Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.::Homo sapiens (taxid: 9606) portable no hit no match PF03015::Sterile 99.94::74-148 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident no hit no match psy992 106 Q96K12::Fatty acyl-CoA reductase 2 ::Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.::Homo sapiens (taxid: 9606) portable no hit no match PF03015::Sterile 99.96::1-72 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_1fjk_A_1::73-91 portable psy16948 297 Q9V730::Exostosin-1 ::Glycosyltransferase required for the biosynthesis of heparan-sulfate and responsible for the alternating addition of beta-1-4-linked glucuronic acid (GlcA) and alpha-1-4-linked N-acetylglucosamine (GlcNAc) units to nascent heparan sulfate chains. Botv is the trigger of heparan sulfate chain initiation and polymerization takes place by a complex of ttv and sotv. Plays a central role in diffusion of morphogens hedgehog (hh), wingless (wg) and decapentaplegic (dpp) via its role in heparan sulfate proteoglycans (HSPGs) biosynthesis which are required for movement of hh, dpp and wg morphogens.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03016::Exostosin 99.91::85-270 GO:0006024::glycosaminoglycan biosynthetic process confident rp_1vt4_I_1::25-60,63-79,81-116,122-157,175-190,193-205,207-253,261-265 portable psy8 50 Q6ZR08::Dynein heavy chain 12, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Homo sapiens (taxid: 9606) confident no hit no match PF03028::Dynein_heavy 99.59::1-49 GO:0005929::cilium confident hh_3vkg_A_1::1-26,30-50 confident psy9556 62 Q91XQ0::Dynein heavy chain 8, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Mus musculus (taxid: 10090) confident no hit no match PF03028::Dynein_heavy 99.74::1-60 GO:0007605::sensory perception of sound confident hh_3vkg_A_1::1-62 confident psy13719 139 P0C6F1::Dynein heavy chain 2, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Mus musculus (taxid: 10090) portable no hit no match PF03028::Dynein_heavy 99.87::6-101 GO:0031514::motile cilium confident hh_3vkg_A_1::8-35,40-104 confident psy1736 125 Q6ZR08::Dynein heavy chain 12, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Homo sapiens (taxid: 9606) confident no hit no match PF03028::Dynein_heavy 99.94::1-124 GO:0031514::motile cilium confident hh_3vkg_A_1::1-19,23-51,56-90,101-124 confident psy9555 138 Q8VHE6::Dynein heavy chain 5, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Required for structural and functional integrity of the cilia of ependymal cells lining the brain ventricles.::Mus musculus (taxid: 10090) confident no hit no match PF03028::Dynein_heavy 99.95::12-138 GO:0031514::motile cilium confident hh_3vkg_A_1::12-50,67-138 confident psy17374 71 Q9JJ79::Cytoplasmic dynein 2 heavy chain 1 ::May function as a motor for intraflagellar retrograde transport. Functions in cilia biogenesis. May play a role in transport between endoplasmic reticulum and Golgi or organization of the Golgi in cells.::Rattus norvegicus (taxid: 10116) portable no hit no match PF03028::Dynein_heavy 99.79::3-71 GO:0044446::intracellular organelle part confident hh_3vkg_A_1::2-41,43-71 confident psy15746 760 Q00576::Phosphatidylserine synthase 1 ::Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine. In membranes, PTDSS1 catalyzes mainly the conversion of phosphatidylcholine. Also converts, in vitro and to a lesser extent, phosphatidylethanolamine.::Cricetulus griseus (taxid: 10029) confident no hit no match PF03034::PSS 100.00::159-463 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy15747 224 Q5ZM65::Phosphatidylserine synthase 1 ::Catalyzes a base-exchange reaction in which the polar head group of phosphatidylethanolamine (PE) or phosphatidylcholine (PC) is replaced by L-serine. In membranes, PTDSS1 catalyzes mainly the conversion of phosphatidylcholine. Also converts, in vitro and to a lesser extent, phosphatidylethanolamine.::Gallus gallus (taxid: 9031) confident no hit no match PF03034::PSS 100.00::1-176 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy13274 82 Q9VJS7::Partner of bursicon ::Final heterodimeric neurohormone released at the end of the molting cycle, involved in the sclerotization (tanning) of the insect cuticle, melanization and wing spreading. Heterodimer specifically activates the G protein-coupled receptor rk.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03045::DAN 98.58::1-78 GO:0031395::bursicon neuropeptide hormone complex confident hh_2k8p_A_1::3-20,22-27,29-44,46-47,58-75 confident psy13264 112 Q66Q82::Bursicon ::Final heterodimeric neurohormone released at the end of the molting cycle, involved in the sclerotization (tanning) of the insect cuticle, melanization and wing spreading.::Anopheles gambiae (taxid: 7165) very confident no hit no match PF03045::DAN 99.81::28-104 GO:0043195::terminal bouton confident hh_2k8p_A_1::32-74,76-111 confident psy5840 132 Q27415::Nucleoplasmin-like protein ::Isoform 2 is inactive for chromatin assembly. In vitro it appears to form a high molecular mass aggregate with the core histones.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF03066::Nucleoplasmin 100.00::1-84 GO:0003723::RNA binding confident hh_1k5j_A_1::1-13,15-24,26-41,43-79 very confident psy10722 106 Q9QYG0::Protein NDRG2 ::Contributes to the regulation of the Wnt signaling pathway. Down-regulates CTNNB1-mediated transcriptional activation of target genes, such as CCND1, and may thereby act as tumor suppressor. May be involved in dendritic cell and neuron differentiation.::Mus musculus (taxid: 10090) confident no hit no match PF03096::Ndr 100.00::33-106 GO:0005794::Golgi apparatus confident hh_2qmq_A_1::34-102 very confident psy5046 94 Q62433::Protein NDRG1 ::Stress-responsive protein involved in hormone responses, cell growth, and differentiation. Acts as a tumor suppressor in many cell types. Necessary but not sufficient for p53/TP53-mediated caspase activation and apoptosis. Required for vesicular recycling of CDH1 and TF. May also function in lipid trafficking. Protects cells from spindle disruption damage. Functions in p53/TP53-dependent mitotic spindle checkpoint. Regulates microtubule dynamics and maintains euploidy (By similarity). Has a role in cell trafficking notably of the Schwann cell and is necessary for the maintenance and development of the peripheral nerve myelin sheath.::Mus musculus (taxid: 10090) portable no hit no match PF03096::Ndr 100.00::2-93 GO:0005813::centrosome confident hh_2qmq_A_1::3-40,46-91 very confident psy17538 164 Q8T7K0::ALG-2 interacting protein X ::Unknown. Required for development but not for cell death.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF03097::BRO1 100.00::3-164 GO:0005737::cytoplasm confident hh_2xs1_A_1::1-164 very confident psy2472 571 Q9VSS2::Signal recognition particle 68 kDa protein ::Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. Srp68 binds the 7S RNA, Srp72 binds to this complex subsequently. This ribonucleoprotein complex might interact directly with the docking protein in the ER membrane and possibly participate in the elongation arrest function.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF03097::BRO1 91.19::390-491 GO:0005829::cytosol confident rp_1vt4_I_1::13-22,25-32,44-71,89-103,109-111,125-129,148-166,173-218,232-242,244-245,247-250,253-263,266-297,302-327,331-334,342-345,348-361,369-372,380-448,450-452,455-467,473-477,479-500,503-535 portable psy12194 2042 P11247::Myeloperoxidase ::Part of the host defense system of polymorphonuclear leukocytes. It is responsible for microbicidal activity against a wide range of organisms. In the stimulated PMN, MPO catalyzes the production of hypohalous acids, primarily hypochlorous acid in physiologic situations, and other toxic intermediates that greatly enhance PMN microbicidal activity.::Mus musculus (taxid: 10090) portable no hit no match PF03098::An_peroxidase 100.00::574-1098 GO:0004601::peroxidase activity confident hh_3nt1_A_1::563-582,593-609,611-613,615-661,670-671,709-712,728-763,765-870,872-873,878-890,892-892,894-915,918-938,941-942,950-950,952-979,981-985,989-999,1013-1013,1033-1070,1072-1086,1092-1098 very confident psy11277 66 P11678::Eosinophil peroxidase ::Mediates tyrosine nitration of secondary granule proteins in mature resting eosinophils. Shows significant inhibitory activity towards Mycobacterium tuberculosis H37Rv by inducing bacterial fragmentation and lysis.::Homo sapiens (taxid: 9606) confident no hit no match PF03098::An_peroxidase 99.88::11-66 GO:0004601::peroxidase activity confident hh_3q9k_A_1::10-23,26-66 very confident psy747 380 Q01603::Peroxidase ::Involved in the chorion hardening process, through protein cross-linking mediated by the formation of di- and tri-tyrosine bonds.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF03098::An_peroxidase 100.00::13-379 GO:0004601::peroxidase activity confident hh_3nt1_A_1::54-238,245-246,257-299,302-343,345-359,365-379 very confident psy9907 116 Q3UQ28::Peroxidasin homolog ::Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.::Mus musculus (taxid: 10090) confident no hit no match PF03098::An_peroxidase 100.00::2-114 GO:0004601::peroxidase activity confident hh_3q9k_A_1::2-114 very confident psy9916 192 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF03098::An_peroxidase 100.00::8-192 GO:0032502::developmental process confident hh_1d2v_C_1::41-62,64-144,146-192 very confident psy9915 191 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF03098::An_peroxidase 100.00::1-189 GO:0032502::developmental process confident hh_3nt1_A_1::21-58,60-81,83-170,172-172,174-186 very confident psy2219 75 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF03098::An_peroxidase 99.93::2-74 GO:0042221::response to chemical stimulus confident hh_3q9k_A_1::2-62,66-74 very confident psy8808 152 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF03098::An_peroxidase 99.93::1-119 GO:0042600::chorion confident hh_3q9k_A_1::1-12,14-26,28-105,107-118 very confident psy11143 940 Q3UQ28::Peroxidasin homolog ::Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.::Mus musculus (taxid: 10090) portable no hit no match PF03098::An_peroxidase 100.00::484-867 GO:0044464::cell part confident hh_2yd9_A_2::43-89,91-277,280-290,293-319 very confident psy7312 1013 no hit no match no hit no match PF03098::An_peroxidase 100.00::610-1007 GO:0044464::cell part confident hh_1q4g_A_1::607-613,620-643,645-649,651-699,755-755,759-784,791-967,972-997,1001-1011 very confident psy8807 136 Q01603::Peroxidase ::Involved in the chorion hardening process, through protein cross-linking mediated by the formation of di- and tri-tyrosine bonds.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03098::An_peroxidase 99.97::18-130 GO:0044699::single-organism process confident hh_3q9k_A_1::18-119,121-134 very confident psy8889 461 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF03098::An_peroxidase 100.00::1-421 GO:0050896::response to stimulus confident hh_3nt1_A_1::3-41,45-46,48-58,60-155,161-176,178-178,180-192,224-240,242-263,269-270,273-273,278-321,324-364,366-379,385-412,416-426 very confident psy5589 60 Q9VQH2::Dual oxidase ::Plays a role in innate immunity limiting microbial proliferation in the gut. May generate antimicrobial oxidative burst through its peroxidase-like domain.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03098::An_peroxidase 99.78::1-59 GO:0050896::response to stimulus confident hh_1q4g_A_1::1-12,14-59 very confident psy746 178 P07202::Thyroid peroxidase ::Iodination and coupling of the hormonogenic tyrosines in thyroglobulin to yield the thyroid hormones T(3) and T(4).::Homo sapiens (taxid: 9606) portable no hit no match PF03098::An_peroxidase 100.00::8-178 GO:0055114::oxidation-reduction process confident hh_3nt1_A_1::8-46,48-48,59-59,65-107,110-151,153-167,173-177 very confident psy11155 101 Q3UQ28::Peroxidasin homolog ::Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.::Mus musculus (taxid: 10090) confident no hit no match PF03098::An_peroxidase 99.44::28-94 GO:0055114::oxidation-reduction process confident hh_1d2v_C_1::32-49,51-94 very confident psy11171 372 Q3UQ28::Peroxidasin homolog ::Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.::Mus musculus (taxid: 10090) confident no hit no match PF03098::An_peroxidase 100.00::5-353 GO:0055114::oxidation-reduction process confident hh_3nt1_A_1::8-18,23-27,31-47,49-52,58-105,115-115,135-135,144-145,170-198,201-209,212-320,323-326,329-343,345-347,349-352 very confident psy8890 150 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF03098::An_peroxidase 99.96::61-149 GO:0055114::oxidation-reduction process confident hh_1d2v_A_1::56-150 very confident psy9903 204 P11678::Eosinophil peroxidase ::Mediates tyrosine nitration of secondary granule proteins in mature resting eosinophils. Shows significant inhibitory activity towards Mycobacterium tuberculosis H37Rv by inducing bacterial fragmentation and lysis.::Homo sapiens (taxid: 9606) portable no hit no match PF03098::An_peroxidase 100.00::2-154 GO:0070887::cellular response to chemical stimulus confident hh_3q9k_A_1::1-17,20-121,125-147,149-160,166-177 very confident psy9604 133 Q3UQ28::Peroxidasin homolog ::Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.::Mus musculus (taxid: 10090) portable no hit no match PF03098::An_peroxidase 100.00::7-108 GO:0070887::cellular response to chemical stimulus confident hh_3q9k_A_1::8-38,40-69,73-98,100-133 very confident psy11276 189 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF03098::An_peroxidase 100.00::2-189 GO:0070887::cellular response to chemical stimulus confident hh_3nt1_A_1::8-45,47-151,153-154,159-171,173-173,175-186 very confident psy722 416 Q6TMK4::Peroxinectin A ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF03098::An_peroxidase 100.00::5-404 GO:0070887::cellular response to chemical stimulus confident hh_3nt1_A_1::11-48,52-55,57-62,64-162,164-164,169-184,186-187,189-200,207-223,225-246,252-253,260-303,306-347,349-362,368-395,399-410 very confident psy2452 91 Q8T390::Endophilin-A ::Required presynaptically at the neuromuscular junction. Implicated in synaptic vesicle endocytosis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03114::BAR 98.21::1-88 GO:0005737::cytoplasm confident hh_2z0v_A_1::1-28,33-91 very confident psy14684 357 O54968::Nuclear factor erythroid 2-related factor 2 ::Transcription activator that binds to antioxidant response (ARE) elements in the promoter regions of target genes. Important for the coordinated up-regulation of genes in response to oxidative stress. May be involved in the transcriptional activation of genes of the beta-globin cluster by mediating enhancer activity of hypersensitive site 2 of the beta-globin locus control region.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03131::bZIP_Maf 99.91::186-279 GO:0000785::chromatin confident hh_1skn_P_1::168-245 very confident psy6769 164 Q76MX4::Transcription factor MafG ::Since they lack a putative transactivation domain, the small Mafs behave as transcriptional repressors when they dimerize among themselves. However, they seem to serve as transcriptional activators by dimerizing with other (usually larger) basic-zipper proteins and recruiting them to specific DNA-binding sites. Small Maf proteins heterodimerize with Fos and may act as competitive repressors of the NF-E2 transcription factor. Transcription factor, component of erythroid-specific transcription factor NF-E2. Activates globin gene expression when associated with NF-E2 (By similarity). May be involved in signal transduction of extracellular H(+).::Rattus norvegicus (taxid: 10116) confident no hit no match PF03131::bZIP_Maf 99.96::54-147 GO:0005667::transcription factor complex confident hh_2wt7_B_1::57-71,74-147 very confident psy4245 328 O75444::Transcription factor Maf ::Acts as a transcriptional activator or repressor. Involved in embryonic lens fiber cell development. Recruits the transcriptional coactivators CREBBP and/or EP300 to crystallin promoters leading to up-regulation of crystallin gene during lens fiber cell differentiation. Activates the expression of IL4 in T helper 2 (Th2) cells. Increases T-cell susceptibility to apoptosis by interacting with MYB and decreasing BCL2 expression. Together with PAX6, transactivates strongly the glucagon gene promoter through the G1 element. Activates transcription of the CD13 proximal promoter in endothelial cells. Represses transcription of the CD13 promoter in early stages of myelopoiesis by affecting the ETS1 and MYB cooperative interaction. Involved in the initial chondrocyte terminal differentiation and the disappearance of hypertrophic chondrocytes during endochondral bone development. Binds to the sequence 5'-[GT]G[GC]N[GT]NCTCAGNN-3' in the L7 promoter. Binds to the T-MARE (Maf response element) sites of lens-specific alpha- and beta-crystallin gene promoters. Binds element G1 on the glucagon promoter. Binds an AT-rich region adjacent to the TGC motif (atypical Maf response element) in the CD13 proximal promoter in endothelial cells (By similarity). When overexpressed, represses anti-oxidant response element (ARE)-mediated transcription. Involved either as an oncogene or as a tumor suppressor, depending on the cell context. Binds to the ARE sites of detoxifying enzyme gene promoters.::Homo sapiens (taxid: 9606) portable no hit no match PF03131::bZIP_Maf 99.95::224-315 GO:0006355::regulation of transcription, DNA-dependent confident hh_3a5t_A_1::219-318 very confident psy9337 156 Q5PPI9::Probable tubulin polyglutamylase TTLL1 ::Catalytic subunit of the neuronal tubulin polyglutamylase complex. Modifies alpha- and beta-tubulin, generating side chains of glutamate on the gamma-carboxyl groups of specific glutamate residues within the C-terminal tail of alpha- and beta-tubulin.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03133::TTL 99.91::99-156 GO:0009987::cellular process confident hh_3tig_A_1::35-69,74-118,121-142,145-155 confident psy11783 189 P46721::Solute carrier organic anion transporter family member 1A2 ::Mediates the Na(+)-independent transport of organic anions such as sulfobromophthalein (BSP) and conjugated (taurocholate) and unconjugated (cholate) bile acids (By similarity). Selectively inhibited by the grapefruit juice component naringin.::Homo sapiens (taxid: 9606) portable no hit no match PF03137::OATP 99.97::31-133 GO:0015721::bile acid and bile salt transport confident hh_1pw4_A_1::67-109 portable psy12613 76 Q9JJL3::Solute carrier organic anion transporter family member 1B2 ::Mediates the Na(+)-independent uptake of organic anions such as taurochlate, bromosulfophthalein and steroid conjugates such as estrone-3-sulfate, 17-beta-glucuronosyl estradiol, dehydroepiandrosterone sulfate and prostaglandin E2.::Mus musculus (taxid: 10090) portable no hit no match PF03137::OATP 99.90::1-76 GO:0015721::bile acid and bile salt transport confident hh_1pw4_A_1::33-75 portable psy11787 100 Q8R3L5::Solute carrier organic anion transporter family member 3A1 ::Mediates the Na(+)-independent transport of organic anions (By similarity). Mediates transport of prostaglandins (PG) E1 and E2, thyroxine (T4), deltorphin II, BQ-123 and vasopressin.::Mus musculus (taxid: 10090) portable no hit no match PF03137::OATP 99.95::7-74 GO:0044425::membrane part confident hh_1pw4_A_1::12-50 portable psy5746 292 Q7YR89::Cysteine and histidine-rich protein 1 ::::Bos taurus (taxid: 9913) confident no hit no match PF03145::Sina 97.72::76-125 GO:0005635::nuclear envelope confident hh_2a25_A_1::90-124 portable psy11985 334 P48765::Sodium/calcium exchanger 1 ::Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.::Bos taurus (taxid: 9913) portable no hit no match PF03160::Calx-beta 99.81::87-181 GO:0070509::calcium ion import confident hh_3rb5_A_1::87-185,241-334 very confident psy5085 319 P48765::Sodium/calcium exchanger 1 ::Rapidly transports Ca(2+) during excitation-contraction coupling. Ca(2+) is extruded from the cell during relaxation so as to prevent overloading of intracellular stores.::Bos taurus (taxid: 9913) portable no hit no match PF03160::Calx-beta 99.87::198-297 GO:0070509::calcium ion import confident hh_3rb5_A_1::86-187,192-319 very confident psy12031 128 P09414::Nuclear factor 1 A-type ::Recognizes and binds the palindromic sequence 5'-TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03165::MH1 99.53::11-112 GO:0003690::double-stranded DNA binding very confident hh_1ozj_A_1::12-23,27-56,58-73,84-86,89-114 confident psy13847 91 P84022::Mothers against decapentaplegic homolog 3 ::Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD3/SMAD4 complex, activates transcription. Also can form a SMAD3/SMAD4/JUN/FOS complex at the AP-1/SMAD site to regulate TGF-beta-mediated transcription. Has an inhibitory effect on wound healing probably by modulating both growth and migration of primary keratinocytes and by altering the TGF-mediated chemotaxis of monocytes. This effect on wound healing appears to be hormone-sensitive. Regulator of chondrogenesis and osteogenesis and inhibits early healing of bone fractures (By similarity). Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator.::Homo sapiens (taxid: 9606) confident no hit no match PF03165::MH1 99.89::28-85 GO:0005829::cytosol confident hh_1ozj_A_1::1-86 very confident psy13845 430 P84022::Mothers against decapentaplegic homolog 3 ::Receptor-regulated SMAD (R-SMAD) that is an intracellular signal transducer and transcriptional modulator activated by TGF-beta (transforming growth factor) and activin type 1 receptor kinases. Binds the TRE element in the promoter region of many genes that are regulated by TGF-beta and, on formation of the SMAD3/SMAD4 complex, activates transcription. Also can form a SMAD3/SMAD4/JUN/FOS complex at the AP-1/SMAD site to regulate TGF-beta-mediated transcription. Has an inhibitory effect on wound healing probably by modulating both growth and migration of primary keratinocytes and by altering the TGF-mediated chemotaxis of monocytes. This effect on wound healing appears to be hormone-sensitive. Regulator of chondrogenesis and osteogenesis and inhibits early healing of bone fractures (By similarity). Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator.::Homo sapiens (taxid: 9606) confident no hit no match PF03165::MH1 100.00::86-189 GO:0007178::transmembrane receptor protein serine/threonine kinase signaling pathway confident hh_1ozj_A_1::59-123,126-137,139-201 very confident psy8244 163 Q9W734::Mothers against decapentaplegic homolog 6 ::Binds to regulatory elements in target promoter regions (By similarity). Antagonist of signaling by TGF-beta (transforming growth factor) type 1 receptor superfamily members; inhibit selectively BMP (bone morphogenetic proteins) signaling. SMAD6 is an inhibitory SMAD (I-SMAD) or antagonistic SMAD.::Gallus gallus (taxid: 9031) portable no hit no match PF03165::MH1 100.00::26-123 GO:0048523::negative regulation of cellular process confident hh_1ozj_A_1::11-54,56-104,111-129 very confident psy558 692 Q5R6H7::Mothers against decapentaplegic homolog 5 ::Transcriptional modulator activated by BMP (bone morphogenetic proteins) type 1 receptor kinase. SMAD5 is a receptor-regulated SMAD (R-SMAD).::Pongo abelii (taxid: 9601) confident no hit no match PF03166::MH2 100.00::294-509 GO:0003700::sequence-specific DNA binding transcription factor activity confident hh_3gmj_D_1::294-439,479-531 very confident psy11633 127 O54835::Mothers against decapentaplegic homolog 9 ::Transcriptional modulator activated by BMP (bone morphogenetic proteins) type 1 receptor kinase. SMAD9 is a receptor-regulated SMAD (R-SMAD) (By similarity). Has been shown to be activated by activin type I receptor-like kinase-2 (ALK-2) which stimulates heteromerization between SMAD9 and SMAD4. ALK-2 binds TGF-beta, activin and BMP.::Rattus norvegicus (taxid: 10116) very confident no hit no match PF03166::MH2 99.96::15-105 GO:0005829::cytosol very confident hh_3gmj_D_1::14-65,68-127 very confident psy11627 291 P97454::Mothers against decapentaplegic homolog 5 ::Transcriptional modulator activated by BMP (bone morphogenetic proteins) type 1 receptor kinase. SMAD5 is a receptor-regulated SMAD (R-SMAD) (By similarity). Required for angiogenesis.::Mus musculus (taxid: 10090) confident no hit no match PF03166::MH2 100.00::132-289 GO:0007179::transforming growth factor beta receptor signaling pathway confident hh_3gmj_D_1::92-118,122-289 very confident psy10708 589 Q1HE26::Mothers against decapentaplegic homolog 4 ::Common SMAD (co-SMAD) is the coactivator and mediator of signal transduction by TGF-beta (transforming growth factor). Component of the heterotrimeric SMAD2/SMAD3-SMAD4 complex that forms in the nucleus and is required for the TGF-mediated signaling. Promotes binding of the SMAD2/SMAD4/FAST-1 complex to DNA and provides an activation function required for SMAD1 or SMAD2 to stimulate transcription. Component of the multimeric SMAD3/SMAD4/JUN/FOS complex which forms at the AP1 promoter site; required for syngernistic transcriptional activity in response to TGF-beta. May act as a tumor suppressor. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator.::Bos taurus (taxid: 9913) confident no hit no match PF03166::MH2 100.00::356-569 GO:0032909::regulation of transforming growth factor beta2 production confident hh_1ygs_A_1::356-589 very confident psy11998 245 O88406::Mothers against decapentaplegic homolog 7 ::Antagonist of signaling by TGF-beta (transforming growth factor) type 1 receptor superfamily members; has been shown to inhibit TGF-beta (Transforming growth factor) and activin signaling by associating with their receptors thus preventing SMAD2 access. Functions as an adapter to recruit SMURF2 to the TGF-beta receptor complex. Also acts by recruiting the PPP1R15A-PP1 complex to TGFBR1, which promotes its dephosphorylation. Positively regulates PDPK1 kinase activity by stimulating its dissociation from the 14-3-3 protein YWHAQ which acts as a negative regulator.::Rattus norvegicus (taxid: 10116) portable no hit no match PF03166::MH2 100.00::31-243 GO:0043234::protein complex confident hh_1dd1_A_1::9-17,19-79,91-105,138-243 very confident psy5734 205 P48613::Protein tipE ::Enhances para sodium channel function. Required during pupal development to rescue adult paralysis and also protects adult flys against heat-induced lethality.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF03185::CaKB 98.35::27-201 GO:0017080::sodium channel regulator activity confident no hit no match psy5732 454 no hit no match no hit no match PF03185::CaKB 96.96::316-404 GO:0017080::sodium channel regulator activity very confident no hit no match psy16324 251 no hit no match no hit no match PF03185::CaKB 99.92::36-245 GO:0017080::sodium channel regulator activity confident no hit no match psy5445 315 no hit no match no hit no match PF03185::CaKB 99.80::70-240 GO:0017080::sodium channel regulator activity confident no hit no match psy8990 358 P34465::Putative cytochrome b561 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF03188::Cytochrom_B561 99.96::142-317 GO:0043231::intracellular membrane-bounded organelle confident hh_4gd3_A_1::213-239,242-272 portable psy6395 236 Q8L856::Transmembrane ascorbate ferrireductase 1 ::Two-heme-containing cytochrome. Catalyzes ascorbate-dependent trans-membrane ferric-chelate reduction.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF03188::Cytochrom_B561 99.97::68-234 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy16648 56 O88941::Mannosyl-oligosaccharide glucosidase ::Cleaves the distal alpha 1,2-linked glucose residue from the Glc(3)Man(9)GlcNAc(2) oligosaccharide precursor in a highly specific manner.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03200::Glyco_hydro_63 99.84::4-55 GO:0005783::endoplasmic reticulum confident no hit no match psy10488 462 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03224::V-ATPase_H_N 95.34::42-138 GO:0043025::neuronal cell body confident hh_4hxt_A_1::19-53,56-121,123-125,127-159,162-165,176-197,203-229 portable psy6706 119 Q3ZBE7::Protein yippee-like 5 ::::Bos taurus (taxid: 9913) very confident no hit no match PF03226::Yippee-Mis18 99.98::14-108 GO:0055114::oxidation-reduction process confident hh_3cxk_A_1::12-29,34-60,63-65,67-85 confident psy12257 145 A6QPN6::Gamma-interferon-inducible lysosomal thiol reductase ::Lysosomal thiol reductase that can reduce protein disulfide bonds. May facilitate the complete unfolding of proteins destined for lysosomal degradation. Plays an important role in antigen processing. Facilitates the generation of MHC class II-restricted epitodes from disulfide bond-containing antigen by the endocytic reduction of disulfide bonds. Facilitates also MHC class I-restricted recognition of exogenous antigens containing disulfide bonds by CD8+ T-cells or crosspresentation.::Bos taurus (taxid: 9913) portable no hit no match PF03227::GILT 100.00::32-143 GO:0005737::cytoplasm confident hh_3hd5_A_1::28-50,52-72 portable psy157 347 Q24276::Hsp90 co-chaperone Cdc37 ::Co-chaperone that binds to numerous kinases and promotes their interaction with the Hsp90 complex, resulting in stabilization and promotion of their activity. Required for cytokinesis and chromosome segregation in mitosis and male meiosis.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF03234::CDC37_N 100.00::1-125 GO:0005737::cytoplasm confident hh_1us7_B_1::124-137,139-332,336-336,338-346 very confident psy7170 137 Q15078::Cyclin-dependent kinase 5 activator 1 ::p35 is a neuron specific activator of CDK5. The complex p35/CDK5 is required for neurite outgrowth and cortical lamination. Involved in dendritic spine morphogenesis by mediating the EFNA1-EPHA4 signaling. Activator of TPKII.::Homo sapiens (taxid: 9606) confident no hit no match PF03261::CDK5_activator 100.00::17-128 GO:0030426::growth cone confident hh_3o0g_D_1::18-46,48-125 very confident psy7171 146 Q15078::Cyclin-dependent kinase 5 activator 1 ::p35 is a neuron specific activator of CDK5. The complex p35/CDK5 is required for neurite outgrowth and cortical lamination. Involved in dendritic spine morphogenesis by mediating the EFNA1-EPHA4 signaling. Activator of TPKII.::Homo sapiens (taxid: 9606) confident no hit no match PF03261::CDK5_activator 100.00::11-137 GO:0030426::growth cone confident hh_3o0g_D_1::11-55,57-134 very confident psy651 412 Q9QZK8::Deoxyribonuclease-2-alpha ::Hydrolyzes DNA under acidic conditions with a preference for double-stranded DNA. Plays a major role in the degradation of nuclear DNA in cellular apoptosis during development. Necessary for proper fetal development and for definitive erythropoiesis in fetal liver, where it degrades nuclear DNA expelled from erythroid precursor cells.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03265::DNase_II 100.00::43-409 GO:0005764::lysosome confident rp_1vt4_I_1::9-47,56-78,83-90,102-131,133-155,157-190,198-211,220-240,248-249,253-260,263-322,326-330 portable psy652 331 P34387::Cell-death-related nuclease 7 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF03265::DNase_II 100.00::2-328 GO:0006259::DNA metabolic process confident rp_1qzv_F_1::12-15,17-28,32-37,40-41,45-48 portable psy6182 323 Q29H56::Protein mab-21 ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident no hit no match PF03281::Mab-21 100.00::67-319 GO:0005634::nucleus very confident hh_1px5_A_1::16-87,90-92,115-121,130-186,196-208,216-223,231-295,299-316 portable psy6187 667 Q29H56::Protein mab-21 ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF03281::Mab-21 100.00::247-655 GO:0005634::nucleus confident hh_1px5_A_2::7-30,34-34,41-55,63-66,74-139,143-160,164-175 portable psy8083 303 P34056::Transcription factor AP-2-alpha ::Sequence-specific DNA-binding protein that interacts with inducible viral and cellular enhancer elements to regulate transcription of selected genes. AP-2 factors bind to the consensus sequence 5'-GCCNNNGGC-3' and activate genes involved in a large spectrum of important biological functions including proper eye, face, body wall, limb and neural tube development. They also suppress a number of genes including MCAM/MUC18, C/EBP alpha and MYC. AP-2-alpha is the only AP-2 protein required for early morphogenesis of the lens vesicle. Together with the CITED2 coactivator, stimulates the PITX2 P1 promoter transcription activation. Associates with chromatin to the PITX2 P1 promoter region.::Mus musculus (taxid: 10090) confident no hit no match PF03299::TF_AP-2 100.00::53-261 GO:0005794::Golgi apparatus very confident rp_1vt4_I_1::4-18,21-27,30-36,39-76,83-83,87-92,111-118,127-138,143-236,240-269 portable psy3564 102 Q5R9M4::Protein cornichon homolog 4 ::::Pongo abelii (taxid: 9601) confident no hit no match PF03311::Cornichon 99.96::1-80 GO:0005783::endoplasmic reticulum confident no hit no match psy12738 173 P49858::Protein cornichon ::Acts as cargo receptor necessary for the transportation of gurken (grk) to a transitional endoplasmic reticulum (tER) site and promotes its incorporation into coat protein complex II (COPII) vesicles. Associated with gurken, produces a signal received by torpedo resulting in a signaling pathway that first establishes posterior follicle cell fates and normal localization of the anterior and posterior determinants, later they act in a signaling event inducing dorsal follicle cell fates and regulating the dorsal-ventral pattern of egg and embryo.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03311::Cornichon 100.00::1-124 GO:0032281::alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex confident no hit no match psy29 222 Q9Z315::U4/U6.U5 tri-snRNP-associated protein 1 ::May play a role in mRNA splicing. May also bind to DNA. Appears to play a role in hypoxia-induced regulation of EPO gene expression.::Mus musculus (taxid: 10090) portable no hit no match PF03343::SART-1 100.00::6-182 GO:0071011::precatalytic spliceosome confident rp_1vt4_I_1::6-20,22-27,30-75,79-106,110-155,160-167,177-215 portable psy3950 338 P48440::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit ::Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.::Gallus gallus (taxid: 9031) very confident no hit no match PF03345::DDOST_48kD 100.00::2-333 GO:0034097::response to cytokine stimulus confident hh_2p9r_A_1::202-217,221-229,232-276 portable psy3951 132 Q05052::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit ::Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.::Canis familiaris (taxid: 9615) confident no hit no match PF03345::DDOST_48kD 100.00::1-127 GO:0034097::response to cytokine stimulus confident hh_3nrp_A_1::2-22,25-58,60-73 portable psy7721 160 Q05052::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit ::Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.::Canis familiaris (taxid: 9615) confident no hit no match PF03345::DDOST_48kD 100.00::1-154 GO:0034097::response to cytokine stimulus confident no hit no match psy5633 198 Q3MHV9::Serine incorporator 1 ::Enhances the incorporation of serine into phosphatidylserine and sphingolipids.::Bos taurus (taxid: 9913) confident no hit no match PF03348::Serinc 100.00::10-198 GO:0006658::phosphatidylserine metabolic process confident no hit no match psy16971 383 Q9GPJ1::Protein Skeletor, isoforms D/E ::Provides structural support to stabilize and organize the microtubule spindle during mitosis (within embryonic somatic cells) and meiosis (within spermatocytes). The role in mitosis regulation depends on the Ran pathway.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03351::DOMON 99.80::4-112 GO:0016363::nuclear matrix confident hh_1d7b_A_1::3-13,19-32,35-50,59-59,61-62,64-88,91-125,128-138 confident psy11215 100 O14490::Disks large-associated protein 1 ::Part of the postsynaptic scaffold in neuronal cells.::Homo sapiens (taxid: 9606) portable no hit no match PF03359::GKAP 100.00::5-100 GO:0019904::protein domain specific binding confident no hit no match psy1511 133 O97422::Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase I ::Involved in the biosynthesis of L2/HNK-1 carbohydrate epitope on both glycolipids and glycoproteins. Shows strict specificity for Gal-beta-1,3-Gal-beta-1,4-Xyl, exhibiting negligible incorporation into other galactoside substrates.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03360::Glyco_transf_43 100.00::2-110 GO:0015020::glucuronosyltransferase activity confident hh_2d0j_A_1::2-85,87-121,127-133 very confident psy7210 159 A6QNP3::Protein phosphatase 1 regulatory subunit 3B ::Acts as a glycogen-targeting subunit for phosphatase PP1. Facilitates interaction of the PP1 with enzymes of the glycogen metabolism and regulates its activity. Suppresses the rate at which PP1 dephosphorylates (inactivates) glycogen phosphorylase and enhances the rate at which it activates glycogen synthase and therefore limits glycogen breakdown. Its activity is inhibited by PYGL, resulting in inhibition of the glycogen synthase and glycogen phosphorylase phosphatase activities of PP1. Dramatically increases basal and insulin-stimulated glycogen synthesis upon overexpression in hepatocytes.::Bos taurus (taxid: 9913) portable no hit no match PF03370::CBM_21 100.00::2-111 GO:0005979::regulation of glycogen biosynthetic process confident hh_2eef_A_1::3-9,16-64,68-114 very confident psy7211 312 Q8C767::Protein phosphatase 1 regulatory subunit 3B ::Acts as a glycogen-targeting subunit for phosphatase PP1. Facilitates interaction of the PP1 with enzymes of the glycogen metabolism and regulates its activity. Suppresses the rate at which PP1 dephosphorylates (inactivates) glycogen phosphorylase and enhances the rate at which it activates glycogen synthase and therefore limits glycogen breakdown. Its activity is inhibited by PYGL, resulting in inhibition of the glycogen synthase and glycogen phosphorylase phosphatase activities of PP1. Dramatically increases basal and insulin-stimulated glycogen synthesis upon overexpression in hepatocytes.::Mus musculus (taxid: 10090) confident no hit no match PF03370::CBM_21 100.00::154-262 GO:0019888::protein phosphatase regulator activity confident hh_2eef_A_1::135-169,172-215,219-264 very confident psy1424 305 Q6DHU4::Pre-mRNA-splicing factor 38A ::May be required for pre-mRNA splicing.::Danio rerio (taxid: 7955) very confident no hit no match PF03371::PRP38 100.00::8-177 GO:0071011::precatalytic spliceosome confident rp_1vt4_I_1::10-20,23-83,85-98,101-115,117-160,168-180,183-198,210-215,221-257 portable psy16257 346 Q6P7Y3::Pre-mRNA-splicing factor 38B ::May be required for pre-mRNA splicing.::Danio rerio (taxid: 7955) confident no hit no match PF03371::PRP38 100.00::24-213 GO:0071011::precatalytic spliceosome confident hh_3pgw_S_1::114-130 portable psy2422 305 Q6DHU4::Pre-mRNA-splicing factor 38A ::May be required for pre-mRNA splicing.::Danio rerio (taxid: 7955) very confident no hit no match PF03371::PRP38 100.00::8-177 GO:0071013::catalytic step 2 spliceosome confident rp_1vt4_I_1::10-20,23-83,85-98,101-115,117-160,168-180,183-198,210-215,221-257 portable psy7201 65 Q12907::Vesicular integral-membrane protein VIP36 ::Plays a role as an intracellular lectin in the early secretory pathway. Interacts with N-acetyl-D-galactosamine and high-mannose type glycans and may also bind to O-linked glycans. Involved in the transport and sorting of glycoproteins carrying high mannose-type glycans.::Homo sapiens (taxid: 9606) confident no hit no match PF03388::Lectin_leg-like 99.76::4-51 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_1gv9_A_1::7-56 very confident psy11306 413 Q9D0F3::Protein ERGIC-53 ::Mannose-specific lectin. May recognize sugar residues of glycoproteins, glycolipids, or glycosylphosphatidyl inositol anchors and may be involved in the sorting or recycling of proteins, lipids, or both. The LMAN1-MCFD2 complex forms a specific cargo receptor for the ER-to-Golgi transport of selected proteins.::Mus musculus (taxid: 10090) confident no hit no match PF03388::Lectin_leg-like 100.00::30-255 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_1gv9_A_1::24-118,120-261 very confident psy9727 257 O94401::L-type lectin-like domain-containing protein C126.08c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF03388::Lectin_leg-like 100.00::27-247 GO:0005794::Golgi apparatus confident hh_1gv9_A_1::29-98,100-142,146-146,190-246 very confident psy13420 169 Q9W1C9::Ejaculatory bulb-specific protein 3 ::Protein component of the posterior mating plug.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03392::OS-D 100.00::68-162 GO:0007552::metamorphosis confident hh_2gvs_A_1::65-169 very confident psy4017 136 Q9W1C9::Ejaculatory bulb-specific protein 3 ::Protein component of the posterior mating plug.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03392::OS-D 100.00::27-121 GO:0007552::metamorphosis confident hh_2gvs_A_1::24-128 very confident psy4018 136 Q9W1C9::Ejaculatory bulb-specific protein 3 ::Protein component of the posterior mating plug.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03392::OS-D 100.00::27-121 GO:0007552::metamorphosis confident hh_2gvs_A_1::24-128 very confident psy1257 125 Q9PWA0::Regulator of G-protein signaling 17 ::Inhibits signal transduction by increasing the GTPase activity of G protein alpha subunits thereby driving them into their inactive GDP-bound form. Binds selectively to G(z)-alpha and G(alpha)-i2 subunits, accelerates their GTPase activity and regulates their signaling activities. The G(z)-alpha activity is inhibited by the phosphorylation and palmitoylation of the G-protein. Negatively regulates mu-opioid receptor-mediated activation of the G-proteins.::Gallus gallus (taxid: 9031) confident no hit no match PF03392::OS-D 99.87::2-59 GO:0044445::cytosolic part confident hh_1zv4_X_1::48-125 very confident psy10473 124 Q8C9S8::Cysteine protease ATG4A ::Cysteine protease required for autophagy, which cleaves the C-terminal part of either MAP1LC3, GABARAPL2 or GABARAP, allowing the liberation of form I. A subpopulation of form I is subsequently converted to a smaller form (form II). Form II, with a revealed C-terminal glycine, is considered to be the phosphatidylethanolamine (PE)-conjugated form, and has the capacity for the binding to autophagosomes. Preferred substrate is GABARAPL2 followed by MAP1LC3A and GABARAP.::Mus musculus (taxid: 10090) portable no hit no match PF03416::Peptidase_C54 99.49::20-60 GO:0008233::peptidase activity confident hh_2p82_A_1::20-81 very confident psy10446 158 Q8BGE6::Cysteine protease ATG4B ::Cysteine protease required for autophagy, which cleaves the C-terminal part of either MAP1LC3, GABARAPL2 or GABARAP, allowing the liberation of form I. A subpopulation of form I is subsequently converted to a smaller form (form II). Form II, with a revealed C-terminal glycine, is considered to be the phosphatidylethanolamine (PE)-conjugated form, and has the capacity for the binding to autophagosomes.::Mus musculus (taxid: 10090) confident no hit no match PF03416::Peptidase_C54 100.00::22-153 GO:0010508::positive regulation of autophagy confident hh_2p82_A_1::22-154 very confident psy10465 309 Q8C9S8::Cysteine protease ATG4A ::Cysteine protease required for autophagy, which cleaves the C-terminal part of either MAP1LC3, GABARAPL2 or GABARAP, allowing the liberation of form I. A subpopulation of form I is subsequently converted to a smaller form (form II). Form II, with a revealed C-terminal glycine, is considered to be the phosphatidylethanolamine (PE)-conjugated form, and has the capacity for the binding to autophagosomes. Preferred substrate is GABARAPL2 followed by MAP1LC3A and GABARAP.::Mus musculus (taxid: 10090) confident no hit no match PF03416::Peptidase_C54 100.00::10-309 GO:0010508::positive regulation of autophagy confident hh_2cy7_A_1::5-194,222-270,275-309 very confident psy9372 57 Q03720::Calcium-activated potassium channel slowpoke ::Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Kinetics are determined by alternative splicing, phosphorylation status and its combination interaction with Slob and 14-3-3-zeta. While the interaction with Slob1 alone increases its activity, its interaction with both Slob1 and 14-3-3-zeta decreases its activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03493::BK_channel_a 99.08::24-57 GO:0043025::neuronal cell body confident hh_3naf_A_1::22-56 very confident psy9054 156 Q5R719::Methylosome subunit pICln ::The interaction with Sm proteins inhibits their assembly on U RNA and interferes with snRNP biogenesis. Inhibits the binding of survival motor neuron protein (SMN) to Sm proteins. May participate in cellular volume control by activation of a swelling-induced chloride conductance pathway.::Pongo abelii (taxid: 9601) portable no hit no match PF03517::Voldacs 100.00::40-153 GO:0005829::cytosol confident hh_1zyi_A_1::6-54,56-98,100-100,104-153 very confident psy1611 330 Q9Z0N7::Potassium voltage-gated channel subfamily KQT member 1 ::Probably important in cardiac repolarization. Associates with KCNE1 (MinK) to form the I(Ks) cardiac potassium current. Elicits a rapidly activating, potassium-selective outward current.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03520::KCNQ_channel 99.81::161-259 GO:0042383::sarcolemma confident hh_2a9h_A_1::2-12,30-42,44-51,59-60,63-92,100-159 very confident psy10985 167 Q7KVW5::Small conductance calcium-activated potassium channel protein ::Forms a voltage-independent potassium channel activated by intracellular calcium. Activation is followed by membrane hyperpolarization. Thought to regulate neuronal excitability by contributing to the slow component of synaptic afterhyperpolarization. The channel is blocked by apamin.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03530::SK_channel 99.95::2-70 GO:0043025::neuronal cell body confident no hit no match psy9055 284 Q9VUQ8::DCN1-like protein ::May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF03556::Cullin_binding 100.00::165-270 GO:0000151::ubiquitin ligase complex confident hh_3tdu_A_1::60-141,165-278 very confident psy12033 79 Q4V8B2::DCN1-like protein 3 ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF03556::Cullin_binding 99.95::2-79 GO:0010225::response to UV-C confident hh_3tdu_A_1::2-14,17-38,44-57,60-79 very confident psy5945 568 Q9NPF2::Carbohydrate sulfotransferase 11 ::Catalyzes the transfer of sulfate to position 4 of the N-acetylgalactosamine (GalNAc) residue of chondroitin. Chondroitin sulfate constitutes the predominant proteoglycan present in cartilage and is distributed on the surfaces of many cells and extracellular matrices. Can also sulfate Gal residues in desulfated dermatan sulfate. Preferentially sulfates in GlcA->GalNAc unit than in IdoA->GalNAc unit. Does not form 4, 6-di-O-sulfated GalNAc when chondroitin sulfate C is used as an acceptor.::Homo sapiens (taxid: 9606) portable no hit no match PF03567::Sulfotransfer_2 99.95::68-263 GO:0001537::N-acetylgalactosamine 4-O-sulfotransferase activity confident hh_1ijy_A_1::488-502,504-555,559-562 confident psy6159 101 Q86BJ3::Heparan sulfate 2-O-sulfotransferase pipe ::Sulfotransferase involved in dorsoventral axis patterning in early embryos. Required for the specific ventral activation of a series of proteases acting in the perivitelline space between the embryonic membrane and the eggshell. Probably acts by mediating the sulfation of some glycoprotein or glycosaminoglycan stably deposited in the egg, whose ventrally localized modification leads to spatially restricted activation of the protease cascade.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF03567::Sulfotransfer_2 91.99::4-40 GO:0005794::Golgi apparatus confident hh_3f5f_A_1::1-50,52-52,54-55,59-101 confident psy484 195 Q9NPF2::Carbohydrate sulfotransferase 11 ::Catalyzes the transfer of sulfate to position 4 of the N-acetylgalactosamine (GalNAc) residue of chondroitin. Chondroitin sulfate constitutes the predominant proteoglycan present in cartilage and is distributed on the surfaces of many cells and extracellular matrices. Can also sulfate Gal residues in desulfated dermatan sulfate. Preferentially sulfates in GlcA->GalNAc unit than in IdoA->GalNAc unit. Does not form 4, 6-di-O-sulfated GalNAc when chondroitin sulfate C is used as an acceptor.::Homo sapiens (taxid: 9606) portable no hit no match PF03567::Sulfotransfer_2 99.86::33-155 GO:0044237::cellular metabolic process confident hh_2ov8_A_1::40-60 portable psy6018 111 Q76KB2::Heparan-sulfate 6-O-sulfotransferase 1 ::6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.::Gallus gallus (taxid: 9031) confident no hit no match PF03567::Sulfotransfer_2 98.34::18-102 GO:0090097::regulation of decapentaplegic signaling pathway confident no hit no match psy12053 167 Q9VUI3::Echinoderm microtubule-associated protein-like CG42247 ::May modify the assembly dynamics of microtubules, such that microtubules are slightly longer, but more dynamic.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03607::DCX 99.91::92-152 GO:0071683::sensory dendrite confident hh_1mg4_A_1::70-96,98-160 very confident psy423 255 Q27403::Transcription factor glial cells missing ::Transcription factor that induces gliogenesis. It determines the choice between glial and neuronal fates. Also has a role in the differentiation of the plasmatocyte/macrophage lineage of hemocytes.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03615::GCM 100.00::88-230 GO:0035165::embryonic crystal cell differentiation confident hh_1odh_A_1::20-41,86-174,177-233 very confident psy8527 209 A2VDL9::Transmembrane protein 184B ::May activate the MAP kinase signaling pathway.::Bos taurus (taxid: 9913) confident no hit no match PF03619::Solute_trans_a 99.96::98-204 GO:0031901::early endosome membrane confident no hit no match psy4905 305 Q6ZMB5::Transmembrane protein 184A ::::Homo sapiens (taxid: 9606) confident no hit no match PF03619::Solute_trans_a 100.00::1-144 GO:0031901::early endosome membrane confident rp_1qzv_F_1::160-171,173-176,180-185 portable psy11310 98 Q00944::Focal adhesion kinase 1 ::Non-receptor protein-tyrosine kinase that plays an essential role in regulating cell migration, adhesion, spreading, reorganization of the actin cytoskeleton, formation and disassembly of focal adhesions and cell protrusions, cell cycle progression, cell proliferation and apoptosis. Required for early embryonic development, embryonic angiogenesis, normal cardiomyocyte migration and proliferation, and normal heart development. Regulates axon growth and neuronal cell migration, axon branching and synapse formation; required for normal development of the nervous system. Plays a role in osteogenesis and differentiation of osteoblasts. Functions in integrin signal transduction, but also in signaling downstream of numerous growth factor receptors, G-protein coupled receptors (GPCR), ephrin receptors, netrin receptors and LDL receptors. Forms multisubunit signaling complexes with SRC and SRC family members upon activation; this leads to the phosphorylation of additional tyrosine residues, creating binding sites for scaffold proteins, effectors and substrates. Regulates numerous signaling pathways. Promotes activation of phosphatidylinositol 3-kinase and the AKT1 signaling cascade. Promotes activation of MAPK1/ERK2, MAPK3/ERK1 and the MAP kinase signaling cascade. Promotes localized and transient activation of guanine nucleotide exchange factors (GEFs) and GTPase-activating proteins (GAPs), and thereby modulates the activity of Rho family GTPases. Signaling via CAS family members mediates activation of RAC1. Regulates P53/TP53 activity and stability. Phosphorylates SRC; this increases SRC kinase activity. Isoform 2 (FRNK) does not contain a kinase domain and inhibits PTK2/FAK1 phosphorylation and signaling.::Gallus gallus (taxid: 9031) portable no hit no match PF03623::Focal_AT 100.00::1-85 GO:0061177::type Is terminal bouton confident hh_1k04_A_1::1-86 very confident psy12283 788 Q9EQH3::Vacuolar protein sorting-associated protein 35 ::Essential component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network. Also required to regulate transcytosis of the polymeric immunoglobulin receptor (pIgR-pIgA).::Mus musculus (taxid: 10090) very confident no hit no match PF03635::Vps35 100.00::13-746 GO:0005829::cytosol very confident hh_2r17_C_1::477-772 very confident psy5745 254 Q6PEB6::MOB-like protein phocein ::May play a role in membrane trafficking, specifically in membrane budding reactions.::Mus musculus (taxid: 10090) very confident no hit no match PF03637::Mob1_phocein 100.00::84-235 GO:0005829::cytosol confident hh_1pi1_A_1::88-93,96-230,232-243 very confident psy7322 221 Q95RA8::MOB kinase activator-like 1 ::Coactivator of Warts (Wts) kinase in the Hippo/SWH (Sav/Wts/Hpo)signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki)oncoprotein. The Hippo/SWH signaling pathway inhibits the activity of the transcriptional complex formed by Scalloped (sd) and Yki and the target genes of this pathway include cyclin-E (cycE), diap1 and bantam. Mats is essential for early development and is required for proper chromosomal segregation in developing embryos.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF03637::Mob1_phocein 100.00::33-209 GO:0005829::cytosol very confident hh_1pi1_A_1::37-218 very confident psy16516 179 Q2LZ59::MOB kinase activator-like 2 ::Required for the normal morphogenesis of a variety of polarized outgrowths including epidermal hairs, bristles, arista laterals, and dendrites.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF03637::Mob1_phocein 100.00::41-179 GO:0019207::kinase regulator activity confident hh_1pi1_A_1::45-73,105-179 very confident psy9562 267 Q9VL13::MOB kinase activator-like 3 ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF03637::Mob1_phocein 100.00::34-251 GO:0019207::kinase regulator activity confident hh_1pi1_A_1::37-44,46-91,117-125,141-259 very confident psy17547 186 Q5RBN8::Protein lin-54 homolog ::Component of the DREAM complex, a multiprotein complex that can both act as a transcription activator or repressor depending on the context. In G0 phase, the complex binds to more than 800 promoters and is required for repression of E2F target genes. In S phase, the complex selectively binds to the promoters of G2/M genes whose products are required for mitosis and participates in their cell cycle dependent activation. In the complex, acts as a DNA-binding protein that binds the promoter of CDK1 in a sequence-specific manner.::Pongo abelii (taxid: 9601) confident no hit no match PF03638::TCR 99.53::93-132 GO:0000794::condensed nuclear chromosome confident hh_2lua_A_1::103-131 portable psy13914 87 Q54DI8::Down syndrome critical region protein 3 homolog ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF03643::Vps26 99.98::2-82 GO:0005634::nucleus confident hh_2fau_A_1::2-79 very confident psy9998 288 Q8C0E2::Vacuolar protein sorting-associated protein 26B ::Probable component of the retromer complex, a complex required to retrieve lysosomal enzyme receptors (IGF2R and M6PR) from endosomes to the trans-Golgi network.::Mus musculus (taxid: 10090) confident no hit no match PF03643::Vps26 100.00::6-285 GO:0005829::cytosol confident hh_2fau_A_1::1-125,156-157,180-187,192-194,202-245,247-285 very confident psy2601 132 P63171::Dynein light chain Tctex-type 1 ::Plays a role in neuronal morhpogenesis; the function is independent of cytoplasmic dynein and seems to be coupled to regulation of the actin cytoskeleton by enhancing Rac1 activity. The function in neurogenesis may be regulated by association with a G-protein beta-gamma dimer. May function as a receptor-independent activator of heterotrimeric G-protein signaling; the activation appears to be independent of a nucleotide exchange. Plays a role in regulating neurogenesis; inhibits the genesis of neurons from precursor cells during cortical development presumably by antagonizing ARHGEF2. Involved in the regulation of mitotic spindle orientation.::Bos taurus (taxid: 9913) very confident no hit no match PF03645::Tctex-1 100.00::34-132 GO:0042803::protein homodimerization activity very confident hh_1xdx_A_1::23-132 very confident psy1183 106 Q9Y5U8::Mitochondrial pyruvate carrier 1 ::::Homo sapiens (taxid: 9606) very confident no hit no match PF03650::MPC 100.00::6-103 GO:0005774::vacuolar membrane very confident no hit no match psy9840 126 Q9D023::Mitochondrial pyruvate carrier 2 ::::Mus musculus (taxid: 10090) very confident no hit no match PF03650::MPC 100.00::17-120 GO:0006090::pyruvate metabolic process confident no hit no match psy9841 125 Q9D023::Mitochondrial pyruvate carrier 2 ::::Mus musculus (taxid: 10090) confident no hit no match PF03650::MPC 100.00::17-115 GO:0006090::pyruvate metabolic process confident no hit no match psy9826 125 Q9D023::Mitochondrial pyruvate carrier 2 ::::Mus musculus (taxid: 10090) very confident no hit no match PF03650::MPC 100.00::17-119 GO:0006090::pyruvate metabolic process confident no hit no match psy7787 463 P83870::PHD finger-like domain-containing protein 5A ::Acts as a transcriptional regulator by binding to the GJA1/Cx43 promoter and enhancing its up-regulation by ESR1/ER-alpha. Also involved in pre-mRNA splicing.::Mus musculus (taxid: 10090) confident no hit no match PF03660::PHF5 100.00::1-83 GO:0016363::nuclear matrix confident hh_2k0a_A_1::1-84 very confident psy15613 219 Q71RP1::Heparanase ::Endoglycosidase that cleaves heparan sulfate proteoglycans (HSPGs) into heparan sulfate side chains and core proteoglycans. Participates in extracellular matrix (ECM) degradation and remodeling. Highly selective enzyme cleaving HSPGs at specific intrachain sites. It is essentially inactive at neutral pH but becomes active under acidic conditions such as during tumor invasion and in inflammatory processes. Facilitates cell migration associated with metastasis, wound healing and inflammation. Enhances shedding of syndecans, and increases endothelial invasion and angiogenesis in myelomas. Acts as procoagulant by increasing the generation of activation factor X in the presence of tissue factor and activation factor VII. Increases cell adhesion to the extacellular matrix (ECM), independent of its enzymatic activity. Induces AKT1/PKB phosphorylation via lipid rafts increasing cell mobility and invasion. Heparin increases this AKT1/PKB activation. Regulates osteogenesis. Enhances angiogenesis through up-regulation of SRC-mediated activation of VEGF. Implicated in hair follicle inner root sheath differentiation and hair homeostasis.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03662::Glyco_hydro_79n 99.91::11-135 GO:0010575::positive regulation vascular endothelial growth factor production confident hh_3vny_A_1::11-50,54-74,77-99,107-217 very confident psy2308 49 Q9VRJ8::Protein Asterix ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03669::UPF0139 99.92::1-49 GO:0016021::integral to membrane confident no hit no match psy3819 122 Q5ZMK7::Ubiquitin-fold modifier 1 ::Ubiquitin-like modifier protein which binds to a number of as yet unidentified target proteins.::Gallus gallus (taxid: 9031) confident no hit no match PF03671::Ufm1 99.91::75-114 GO:0005634::nucleus confident hh_1j0g_A_1::75-121 very confident psy3489 129 P61203::COP9 signalosome complex subunit 2 ::Essential component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF-type complexes such as SCF, CSA or DDB2. The complex is also involved in phosphorylation of p53/TP53, c-jun/JUN, IkappaBalpha/NFKBIA, ITPK1 and IRF8/ICSBP, possibly via its association with CK2 and PKD kinases. CSN-dependent phosphorylation of TP53 and JUN promotes and protects degradation by the Ubl system, respectively. Involved in early stage of neuronal differentiation via its interaction with NIF3L1.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03704::BTAD 90.20::22-120 GO:0003714::transcription corepressor activity confident hh_3txn_A_1::4-60,67-98,100-100,102-120 confident psy9901 390 O01404::Peptidylglycine alpha-hydroxylating monooxygenase ::Monooxygenase that catalyzes an essential reaction in C-terminal alpha-amidation of peptides. Produces an unstable peptidyl(2-hydroxyglycine) intermediate. C-terminal amidation of peptides is required for normal developmental transitions and for biosynthesis of secretory peptides throughout the life.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF03712::Cu2_monoox_C 99.95::244-373 GO:0005615::extracellular space confident hh_1yi9_A_1::98-105,107-111,113-150,162-174,177-274,276-378 very confident psy3214 336 P80209::Cathepsin D ::Acid protease active in intracellular protein breakdown.::Bos taurus (taxid: 9913) portable no hit no match PF03723::Hemocyanin_C 99.97::227-336 GO:0043231::intracellular membrane-bounded organelle confident hh_3psg_A_1::17-33,38-161,163-163,166-174,176-224 very confident psy10146 1902 no hit no match no hit no match PF03732::Retrotrans_gag 97.16::51-142 GO:0005794::Golgi apparatus confident rp_1vt4_I_9::930-951,962-966,968-985,989-1062,1067-1106,1111-1122,1124-1150,1154-1163,1170-1172,1174-1184,1197-1199,1204-1210,1212-1244,1250-1294,1301-1373,1377-1382,1385-1411,1415-1423,1428-1445,1449-1462,1464-1474,1476-1489 portable psy8979 142 Q5F2E8::Serine/threonine-protein kinase TAO1 ::Serine/threonine-protein kinase involved in various processes such as p38/MAPK14 stress-activated MAPK cascade, DNA damage response and regulation of cytoskeleton stability. Phosphorylates MAP2K3, MAP2K6 and MARK2. Acts as an activator of the p38/MAPK14 stress-activated MAPK cascade by mediating phosphorylation and subsequent activation of the upstream MAP2K3 and MAP2K6 kinases. Involved in G-protein coupled receptor signaling to p38/MAPK14. In response to DNA damage, involved in the G2/M transition DNA damage checkpoint by activating the p38/MAPK14 stress-activated MAPK cascade, probably by mediating phosphorylation of MAP2K3 and MAP2K6. Acts as a regulator of cytoskeleton stability by phosphorylating 'Thr-208' of MARK2, leading to activate MARK2 kinase activity and subsequent phosphorylation and detachment of MAPT/TAU from microtubules. Also acts as a regulator of apoptosis: regulates apoptotic morphological changes, including cell contraction, membrane blebbing and apoptotic bodies formation via activation of the MAPK8/JNK cascade.::Mus musculus (taxid: 10090) confident no hit no match PF03763::Remorin_C 94.47::3-90 GO:0046328::regulation of JNK cascade confident hh_1f5n_A_1::8-40,45-52,57-96 portable psy1900 293 Q9LY23::Inositol polyphosphate multikinase alpha ::Inositol phosphate kinase with a broad substrate specificity. Phosphorylates inositol 1,4,5-trisphosphate (Ins(1,4,5)P3), inositol 1,4,5,6-tetrakisphosphate (Ins(1,4,5,6)P4), inositol 1,3,4,5-tetrakisphosphate (Ins(1,3,4,5)P4), inositol 1,3,4,6-tetrakisphosphate (Ins(1,3,4,6)P4) and inositol 1,2,3,4,6-pentakisphosphate (Ins(1,2,3,4,6)P5) but not inositol 1,4-bisphosphate (Ins(1,4)P2), inositol 1,3,4-trisphosphate (Ins(1,3,4)P3), inositol 1,2,6-trisphosphate (Ins(1,2,6)P3), inositol 3,4,5,6-tetrakisphosphate (Ins(3,4,5,6)P4), inositol 1,3,4,5,6-pentakisphosphate (Ins(1,3,4,5,6)P5), inositol 1,2,4,5,6-pentakisphosphate (Ins(1,2,4,5,6)P5) or inositol hexakisphosphate (InsP6). Regulates pollen and root development probably through the regulation of InsP3-mediated calcium accumulation.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF03770::IPK 100.00::109-281 GO:0005829::cytosol confident hh_2aqx_A_1::28-38,47-61,67-79,86-100,105-170,177-201,208-286 very confident psy5471 454 Q63965::Sideroflexin-1 ::Might be involved in the transport of a component required for iron utilization into or out of the mitochondria.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03820::Mtc 100.00::21-454 GO:0005743::mitochondrial inner membrane confident rp_1vt4_I_1::43-67,70-73,77-87,116-149,151-155,158-171,184-193,195-209,220-225,234-275,290-313,318-399,401-448 portable psy16712 221 Q9JHY2::Sideroflexin-3 ::Potential iron transporter.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03820::Mtc 100.00::3-221 GO:0005743::mitochondrial inner membrane confident no hit no match psy2995 429 Q9JHY2::Sideroflexin-3 ::Potential iron transporter.::Rattus norvegicus (taxid: 10116) confident no hit no match PF03820::Mtc 100.00::14-429 GO:0005743::mitochondrial inner membrane confident rp_1vt4_I_1::22-29,35-42,45-80,83-103,105-118,129-135,140-147,163-166,174-213,218-232,245-276,294-299,301-302,316-326,336-339,341-364,370-405,413-426 portable psy15890 126 Q99NA7::Pituitary homeobox 1 ::May play a role in the development of anterior structures, and in particular, the brain and facies and in specifying the identity or structure of hindlimb.::Rattus norvegicus (taxid: 10116) portable no hit no match PF03826::OAR 98.64::68-88 GO:0007275::multicellular organismal development confident no hit no match psy1453 262 Q5RB69::Coiled-coil domain-containing protein 86 ::::Pongo abelii (taxid: 9601) portable no hit no match PF03879::Cgr1 99.67::109-242 GO:0044446::intracellular organelle part confident no hit no match psy4382 258 Q5R4X4::Translocon-associated protein subunit alpha ::TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. May be involved in the recycling of the translocation apparatus after completion of the translocation process or may function as a membrane-bound chaperone facilitating folding of translocated proteins.::Pongo abelii (taxid: 9601) confident no hit no match PF03896::TRAP_alpha 100.00::10-248 GO:0005783::endoplasmic reticulum confident hh_3isy_A_1::15-77,80-93 portable psy3517 113 Q9BV10::Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase ::Adds the eighth mannose residue in an alpha-1,6 linkage onto the dolichol-PP-oligosaccharide precursor (dolichol-PP-Man(7)GlcNAc(2)) required for protein glycosylation.::Homo sapiens (taxid: 9606) confident no hit no match PF03901::Glyco_transf_22 97.35::61-109 GO:0031227::intrinsic to endoplasmic reticulum membrane confident no hit no match psy11017 142 Q9D5V6::Synapse-associated protein 1 ::::Mus musculus (taxid: 10090) portable no hit no match PF03909::BSD 99.57::45-102 GO:0045202::synapse confident hh_1x3a_A_1::8-23,26-27,33-109 very confident psy4345 161 Q54E83::Glutathione synthetase ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF03917::GSH_synth_ATP 100.00::54-160 GO:0005829::cytosol confident hh_2hgs_A_1::4-25,27-161 very confident psy4344 70 P46413::Glutathione synthetase ::::Rattus norvegicus (taxid: 10116) portable no hit no match PF03917::GSH_synth_ATP 99.94::3-70 GO:0042221::response to chemical stimulus confident hh_2hgs_A_1::3-70 very confident psy4343 93 Q54E83::Glutathione synthetase ::::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF03917::GSH_synth_ATP 99.96::10-92 GO:0042221::response to chemical stimulus confident hh_2hgs_A_1::3-93 very confident psy17186 100 Q08122::Transducin-like enhancer protein 3 ::Transcriptional corepressor that binds to a number of transcription factors. Inhibits the transcriptional activation mediated by CTNNB1 and TCF family members in Wnt signaling. The effects of full-length TLE family members may be modulated by association with dominant-negative AES (By similarity). May play an important role during spermatogenesis.::Mus musculus (taxid: 10090) confident no hit no match PF03920::TLE_N 100.00::1-100 GO:0090090::negative regulation of canonical Wnt receptor signaling pathway confident hh_4aj5_K_1::12-23,31-78 portable psy7086 376 P18289::Transcription factor AP-1 ::Transcription factor that recognizes and binds to the enhancer heptamer motif 5'-TGA[CG]TCA-3'.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF03957::Jun 99.95::28-140 GO:0050896::response to stimulus confident hh_1jnm_A_1::298-359 very confident psy13178 163 Q5FVP8::Diacylglycerol O-acyltransferase 2 ::Essential acyltransferase that catalyzes the terminal and only committed step in triacylglycerol synthesis by using diacylglycerol and fatty acyl CoA as substrates. Required for synthesis and storage of intracellular triglycerides. Probably plays a central role in cytosolic lipid accumulation.::Rattus norvegicus (taxid: 10116) portable no hit no match PF03982::DAGAT 100.00::45-163 GO:0004144::diacylglycerol O-acyltransferase activity confident no hit no match psy6664 624 Q2KJ14::RNA polymerase II-associated factor 1 homolog ::Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II and is implicated in regulation of development and maintenance of embryonic stem cell pluripotency. PAF1C associates with RNA polymerase II through interaction with POLR2A CTD non-phosphorylated and 'Ser-2'- and 'Ser-5'-phosphorylated forms and is involved in transcriptional elongation, acting both indepentently and synergistically with TCEA1 and in cooperation with the DSIF complex and HTATSF1. PAF1C is required for transcription of Hox and Wnt target genes. PAF1C is involved in hematopoiesis and stimulates transcriptional activity of MLL1. PAF1C is involved in histone modifications such as ubiquitination of histone H2B and methylation on histone H3 'Lys-4' (H3K4me3). PAF1C recruits the RNF20/40 E3 ubiquitin-protein ligase complex and the E2 enzyme UBE2A or UBE2B to chromatin which mediate monoubiquitination of 'Lys-120' of histone H2B (H2BK120ub1); UB2A/B-mediated H2B ubiquitination is proposed to be coupled to transcription. PAF1C is involved in mRNA 3' end formation probably through association with cleavage and poly(A) factors. Connects PAF1C with the RNF20/40 E3 ubiquitin-protein ligase complex. Involved in polyadenylation of mRNA precursors.::Bos taurus (taxid: 9913) confident no hit no match PF03985::Paf1 100.00::35-395 GO:0016593::Cdc73/Paf1 complex confident rp_1vt4_I_1::22-57,83-91,93-100,104-110,117-127,133-173,178-193,207-220,230-235,239-239,242-261,266-271,277-307,314-354,361-366,370-411 portable psy6666 175 Q6P2Y1::RNA polymerase II-associated factor 1 homolog ::Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II. PAF1C associates with RNA polymerase II, is involved in transcriptional elongation and in histone modifications including methylation on histone H3 'Lys-4' (H3K4me3).::Xenopus tropicalis (taxid: 8364) confident no hit no match PF03985::Paf1 99.95::1-133 GO:0016593::Cdc73/Paf1 complex confident no hit no match psy4303 420 Q9NT62::Ubiquitin-like-conjugating enzyme ATG3 ::E2-like enzyme involved in autophagy and mitochondrial homeostasis. Catalyzes the conjugation of ATG8-like proteins (GABARAP, GABARAPL1, GABARAPL2 or MAP1LC3A) to phosphatidylethanolamine (PE). PE-conjugation to ATG8-like proteins is essential for autophagy. Preferred substrate is MAP1LC3A. Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of ATG12 to itself, ATG12 conjugation to ATG3 playing a role in mitochondrial homeostasis but not in autophagy. ATG7 (E1-like enzyme) facilitates this reaction by forming an E1-E2 complex with ATG3.::Homo sapiens (taxid: 9606) confident no hit no match PF03986::Autophagy_N 100.00::261-368 GO:0005829::cytosol confident hh_2dyt_A_1::259-342,344-364 very confident psy12912 185 Q9V359::Vacuolar protein sorting-associated protein 28 homolog ::Component of the ESCRT-I complex, a regulator of vesicular trafficking process.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF03997::VPS28 100.00::22-185 GO:0010797::regulation of multivesicular body size involved in endosome transport very confident hh_2p22_B_1::2-68,70-96 very confident psy280 156 Q13901::Nuclear nucleic acid-binding protein C1D ::Plays a role in the recruitment of the RNA exosome complex to pre-rRNA to mediate the 3'-5' end processing of the 5.8S rRNA; this function may include MPHOSPH6. Can activate PRKDC not only in the presence of linear DNA but also in the presence of supercoiled DNA. Can induce apoptosis in a p53/TP53 dependent manner. May regulate the TRAX/TSN complex formation. Potentiates transcriptional repression by NR1D1 and THRB.::Homo sapiens (taxid: 9606) confident no hit no match PF04000::Sas10_Utp3 99.71::17-89 GO:0017053::transcriptional repressor complex confident no hit no match psy7576 481 Q5XJE5::RNA polymerase-associated protein LEO1 ::Component of the PAF1 complex (PAF1C) which has multiple functions during transcription by RNA polymerase II and is implicated in regulation of development and maintenance of embryonic stem cell pluripotency. PAF1C associates with RNA polymerase II through interaction with POLR2A CTD non-phosphorylated and 'Ser-2'- and 'Ser-5'-phosphorylated forms and is involved in transcriptional elongation, acting both indepentently and synergistically with TCEA1 and in cooperation with the DSIF complex and HTATSF1. PAF1C is required for transcription of Hox and Wnt target genes. PAF1C is involved in hematopoiesis and stimulates transcriptional activity of MLL1. PAF1C is involved in histone modifications such as ubiquitination of histone H2B and methylation on histone H3 'Lys-4' (H3K4me3). PAF1C recruits the RNF20/40 E3 ubiquitin-protein ligase complex and the E2 enzyme UBE2A or UBE2B to chromatin which mediate monoubiquitination of 'Lys-120' of histone H2B (H2BK120ub1); UB2A/B-mediated H2B ubiquitination is proposed to be coupled to transcription. PAF1C is involved in mRNA 3' end formation probably through association with cleavage and poly(A) factors. Involved in polyadenylation of mRNA precursors. Connects PAF1C to Wnt signaling.::Mus musculus (taxid: 10090) confident no hit no match PF04004::Leo1 100.00::197-361 GO:0016593::Cdc73/Paf1 complex confident no hit no match psy13031 477 Q7PVX8::Probable actin-related protein 2/3 complex subunit 2 ::Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament.::Anopheles gambiae (taxid: 7165) confident no hit no match PF04045::P34-Arc 100.00::177-469 GO:0005794::Golgi apparatus confident hh_1k8k_D_1::175-243,273-279,291-297,310-321,327-327,335-477 very confident psy2691 181 Q27954::Coatomer subunit alpha ::Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor.::Bos taurus (taxid: 9913) confident no hit no match PF04053::Coatomer_WDAD 99.95::1-85 GO:0005829::cytosol confident hh_3mkq_B_1::1-108,110-133 very confident psy74 134 Q27954::Coatomer subunit alpha ::Xenin stimulates exocrine pancreatic secretion. It inhibits pentagastrin-stimulated secretion of acid, to induce exocrine pancreatic secretion and to affect small and large intestinal motility. In the gut, xenin interacts with the neurotensin receptor.::Bos taurus (taxid: 9913) confident no hit no match PF04053::Coatomer_WDAD 99.60::25-133 GO:0005829::cytosol confident hh_3mkq_A_1::48-68,76-88,96-125 confident psy11108 106 Q8BND3::WD repeat-containing protein 35 ::May promote CASP3 activation and TNF-stimulated apoptosis (By similarity). Required for ciliogenesis.::Mus musculus (taxid: 10090) portable no hit no match PF04053::Coatomer_WDAD 98.62::7-94 GO:0005930::axoneme confident hh_3mkq_A_1::8-98 confident psy14933 100 Q96RY7::Intraflagellar transport protein 140 homolog ::::Homo sapiens (taxid: 9606) portable no hit no match PF04053::Coatomer_WDAD 92.53::20-84 GO:0031513::nonmotile primary cilium confident hh_3mkq_A_1::14-92 portable psy8677 99 Q8BND3::WD repeat-containing protein 35 ::May promote CASP3 activation and TNF-stimulated apoptosis (By similarity). Required for ciliogenesis.::Mus musculus (taxid: 10090) portable no hit no match PF04053::Coatomer_WDAD 98.69::3-83 GO:0042995::cell projection confident hh_3mkq_A_1::3-83 very confident psy16823 263 Q3T035::Actin-related protein 2/3 complex subunit 3 ::Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.::Bos taurus (taxid: 9913) confident no hit no match PF04062::P21-Arc 100.00::1-257 GO:0051286::cell tip confident hh_1k8k_E_1::1-33,35-104,189-262 very confident psy16824 85 Q3T035::Actin-related protein 2/3 complex subunit 3 ::Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.::Bos taurus (taxid: 9913) confident no hit no match PF04062::P21-Arc 100.00::1-79 GO:0051286::cell tip confident hh_3dwl_E_1::1-79 very confident psy17507 1121 P49793::Nuclear pore complex protein Nup98-Nup96 ::Plays a role in the bidirectional transport across the nucleoporin complex (NPC). The repeat domain has a direct role in the transport.::Rattus norvegicus (taxid: 10116) portable no hit no match PF04096::Nucleoporin2 100.00::550-693 GO:0005643::nuclear pore confident hh_1ko6_A_1::536-597,601-693 very confident psy9793 133 Q5R532::Macrophage erythroblast attacher ::Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.::Pongo abelii (taxid: 9601) confident no hit no match PF04102::SlyX 91.42::78-117 GO:0016363::nuclear matrix confident hh_3swy_A_1::58-100 portable psy7709 336 Q9H1Y0::Autophagy protein 5 ::May play an important role in the apoptotic process, possibly within the modified cytoskeleton. Its expression is a relatively late event in the apoptotic process, occurring downstream of caspase activity.::Homo sapiens (taxid: 9606) confident no hit no match PF04106::APG5 100.00::144-335 GO:0043234::protein complex confident hh_4gdk_B_1::46-74,76-99,107-108,113-118,123-132,137-292,294-336 very confident psy16001 318 O88597::Beclin-1 ::Plays a central role in autophagy. Required for the abcission step in cytokinesis. May play a role in antiviral host defense.::Mus musculus (taxid: 10090) confident no hit no match PF04111::APG6 100.00::83-313 GO:0043234::protein complex confident hh_4ddp_A_1::116-314 very confident psy16791 126 Q54FR4::PXMP2/4 family protein 4 ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF04117::Mpv17_PMP22 99.95::53-120 GO:0005777::peroxisome confident no hit no match psy4340 218 A5D787::Mpv17-like protein 2 ::::Bos taurus (taxid: 9913) confident no hit no match PF04117::Mpv17_PMP22 99.91::108-175 GO:0031090::organelle membrane confident no hit no match psy4341 211 Q6DGV7::Mpv17-like protein 2 ::::Danio rerio (taxid: 7955) confident no hit no match PF04117::Mpv17_PMP22 99.92::101-168 GO:0031090::organelle membrane confident no hit no match psy17613 287 Q06563::Protein SYM1 ::May be involved in cellular response to stress. Required to maintain mitochondrial DNA (mtDNA) integrity and stability. Required for ethanol metabolism and tolerance during heat shock.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF04117::Mpv17_PMP22 99.86::200-265 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy16727 210 Q9V492::Mpv17-like protein ::Involved in mitochondria homeostasis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04117::Mpv17_PMP22 99.91::123-190 GO:0043234::protein complex confident no hit no match psy5407 147 Q54FR4::PXMP2/4 family protein 4 ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF04117::Mpv17_PMP22 99.78::97-147 GO:0072593::reactive oxygen species metabolic process confident no hit no match psy17149 98 Q8N1B4::Vacuolar protein sorting-associated protein 52 homolog ::May be involved in retrograde transport of early and late endosomes to the late Golgi. The GARP complex is required for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD.::Homo sapiens (taxid: 9606) confident no hit no match PF04129::Vps52 99.23::36-83 GO:0030154::cell differentiation confident no hit no match psy3233 116 Q9Y705::Spindle pole body component alp4 ::Component of the gamma tubule complex that is required for the regulation of both interphase microtubules and mitotic bipolar spindles. Required for correct septation.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF04130::Spc97_Spc98 99.52::12-116 GO:0005634::nucleus confident hh_3rip_A_1::17-29,31-116 confident psy3229 174 Q921G8::Gamma-tubulin complex component 2 ::Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.::Mus musculus (taxid: 10090) confident no hit no match PF04130::Spc97_Spc98 99.84::2-109 GO:0043015::gamma-tubulin binding confident hh_3rip_A_1::2-52,54-59,61-128 very confident psy4531 88 Q28F21::Secretory carrier-associated membrane protein 5 ::Required for the calcium-dependent exocytosis of signal sequence-containing cytokines. Probably acts in cooperation with the SNARE machinery.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF04144::SCAMP 99.98::3-88 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy7514 347 Q5RAS6::High affinity copper uptake protein 1 ::High-affinity, saturable copper transporter involved in dietary copper uptake.::Pongo abelii (taxid: 9601) portable no hit no match PF04145::Ctr 100.00::188-332 GO:0006825::copper ion transport confident hh_2ls3_A_1::289-315 confident psy8690 222 Q9QY02::YTH domain-containing protein 1 ::May be part of a signal transduction pathway that influences splice site selection.::Rattus norvegicus (taxid: 10116) confident no hit no match PF04146::YTH 100.00::89-217 GO:0016604::nuclear body confident hh_2yud_A_1::78-218 very confident psy8691 211 Q9QY02::YTH domain-containing protein 1 ::May be part of a signal transduction pathway that influences splice site selection.::Rattus norvegicus (taxid: 10116) portable no hit no match PF04146::YTH 100.00::48-208 GO:0016604::nuclear body confident hh_2yud_A_1::26-33,40-84,126-208 very confident psy16643 165 Q54ER8::Protein TEX261 homolog ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF04148::Erv26 100.00::11-161 GO:0030176::integral to endoplasmic reticulum membrane confident no hit no match psy5433 100 Q5ZLK1::DDB1- and CUL4-associated factor 13 ::Possible role in ribosomal RNA processing. May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex.::Gallus gallus (taxid: 9031) portable no hit no match PF04158::Sof1 100.00::9-96 GO:0044424::intracellular part confident no hit no match psy13863 261 Q8BH58::TIP41-like protein ::May be a allosteric regulator of serine/threonine-protein phosphatase 2A (PP2A). Inhibits catalytic activity of the PP2A(D) core complex in vitro. The PP2A(C):TIPRL complex does not show phosphatase activity. May play a role in the regulation of ATM/ATR signaling pathway controlling DNA replication and repair.::Mus musculus (taxid: 10090) confident no hit no match PF04176::TIP41 100.00::57-231 GO:0034048::negative regulation of protein phosphatase type 2A activity confident no hit no match psy2194 92 Q10191::Protein LTV1 ::Involved in protein transport. Non-ribosomal factor required for efficient nuclear export of the ribosomal 40S subunit. May participate in intracellular sorting of GAP1 out of the endosome.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident no hit no match PF04180::LTV 99.71::54-88 GO:0005829::cytosol confident no hit no match psy8555 127 B5KFI0::Golgi to ER traffic protein 4 homolog ::Component of the BAT3 complex, a multiprotein complex involved in the post-translational delivery of tail-anchored (TA) membrane proteins to the endoplasmic reticulum membrane. TA membrane proteins, also named type II transmembrane proteins, contain a single C-terminal transmembrane region.::Taeniopygia guttata (taxid: 59729) confident no hit no match PF04190::DUF410 99.79::49-125 GO:0071818::BAT3 complex confident hh_3lpz_A_1::46-64,66-125 very confident psy5794 152 P55326::Uncharacterized protein F13E6.1 ::::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF04201::TPD52 99.96::61-152 GO:0042803::protein homodimerization activity confident no hit no match psy14379 120 P55326::Uncharacterized protein F13E6.1 ::::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF04201::TPD52 100.00::22-120 GO:0042803::protein homodimerization activity confident hh_1ykh_B_1::52-73,77-97 portable psy1410 246 Q8WV92::MIT domain-containing protein 1 ::May play a role in endosomal protein transport.::Homo sapiens (taxid: 9606) confident no hit no match PF04212::MIT 99.77::4-72 GO:0019898::extrinsic to membrane confident hh_2ymb_A_1::4-155,162-246 very confident psy11809 240 Q8WV92::MIT domain-containing protein 1 ::May play a role in endosomal protein transport.::Homo sapiens (taxid: 9606) confident no hit no match PF04212::MIT 99.73::1-66 GO:0019898::extrinsic to membrane confident hh_2ymb_A_1::1-149,156-240 very confident psy72 202 no hit no match no hit no match PF04281::Tom22 99.88::18-101 GO:0005739::mitochondrion confident no hit no match psy15070 308 Q9H4M3::F-box only protein 44 ::Substrate-recognition component of the SCF (SKP1-CUL1-F-box protein)-type E3 ubiquitin ligase complex.::Homo sapiens (taxid: 9606) confident no hit no match PF04300::FBA 100.00::79-286 GO:0030163::protein catabolic process confident hh_2e31_A_1::14-70,72-85,87-88,92-129,133-140,161-287 very confident psy3040 189 Q9EP53::Hamartin ::In complex with TSC2, inhibits the nutrient-mediated or growth factor-stimulated phosphorylation of S6K1 and EIF4EBP1 by negatively regulating mTORC1 signaling (By similarity). Implicated as a tumor suppressor. Involved in microtubule-mediated protein transport, but this seems to be due to unregulated mTOR signaling.::Mus musculus (taxid: 10090) portable no hit no match PF04388::Hamartin 100.00::1-189 GO:0043229::intracellular organelle confident hh_2qk2_A_1::31-42,45-71,73-75,77-125 portable psy15724 360 P38772::Box C/D snoRNA protein 1 ::Required for box C/D snoRNAs accumulation involved in snoRNA processing, snoRNA transport to the nucleolus and ribosome biogenesis.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF04438::zf-HIT 98.77::40-69 GO:0048812::neuron projection morphogenesis confident hh_1x4s_A_1::41-72,76-82 confident psy17453 140 Q7PRJ0::CTL-like protein 2 ::::Anopheles gambiae (taxid: 7165) confident no hit no match PF04515::Choline_transpo 99.94::1-117 GO:0016021::integral to membrane confident no hit no match psy5929 286 Q3UNW5::Transcription factor CP2-like protein 1 ::Transcriptional suppressor. May suppress UBP1-mediated transcriptional activation.::Mus musculus (taxid: 10090) confident no hit no match PF04516::CP2 100.00::8-177 GO:0000122::negative regulation of transcription from RNA polymerase II promoter confident no hit no match psy6895 63 Q9NZI5::Grainyhead-like protein 1 homolog ::Transcription factor. Isoform 1 may function as an activator and isoform 2 as a repressor in tissues where both forms are expressed. May play a role in development. May be involved in epidermal differentiation (By similarity). Binds and transactivates the EN1 promoter.::Homo sapiens (taxid: 9606) confident no hit no match PF04516::CP2 99.09::21-63 GO:0003700::sequence-specific DNA binding transcription factor activity very confident no hit no match psy5305 947 Q5XXA6::Anoctamin-1 ::Acts as a calcium-activated chloride channel. Required for normal tracheal development.::Homo sapiens (taxid: 9606) confident no hit no match PF04547::Anoctamin 100.00::285-892 GO:0005229::intracellular calcium activated chloride channel activity confident rp_1vt4_I_1::108-117,122-149,152-168,184-202,213-218,228-245,249-253,256-302,304-342,345-360,362-447,456-518,520-527,530-541,549-557,561-577,581-584,594-610,613-621,624-631,636-665 portable psy3256 512 Q5XXA6::Anoctamin-1 ::Acts as a calcium-activated chloride channel. Required for normal tracheal development.::Homo sapiens (taxid: 9606) portable no hit no match PF04547::Anoctamin 100.00::150-500 GO:0005229::intracellular calcium activated chloride channel activity confident rp_1vt4_I_1::56-84,95-106,108-167,169-207,210-225,227-312,321-383,385-392,395-406,414-422,426-442,446-449,459-464 portable psy15516 107 Q6IFT6::Anoctamin-7 ::May act as a calcium-activated chloride channel. May play a role in cell-cell interactions.::Rattus norvegicus (taxid: 10116) confident no hit no match PF04547::Anoctamin 99.15::2-85 GO:0005229::intracellular calcium activated chloride channel activity confident no hit no match psy15814 224 Q4V8U5::Anoctamin-10 ::May act as a calcium-activated chloride channel.::Danio rerio (taxid: 7955) portable no hit no match PF04547::Anoctamin 100.00::4-223 GO:0005622::intracellular confident rp_1vt4_I_1::35-54,56-118,121-130,135-163,166-183,185-190,195-207 portable psy17030 108 Q9HCE9::Anoctamin-8 ::May act as a calcium-activated chloride channel.::Homo sapiens (taxid: 9606) portable no hit no match PF04547::Anoctamin 99.69::1-72 GO:0005622::intracellular confident hh_2kwh_A_1::57-83 portable psy15815 117 Q9HCE9::Anoctamin-8 ::May act as a calcium-activated chloride channel.::Homo sapiens (taxid: 9606) portable no hit no match PF04547::Anoctamin 99.98::1-108 GO:0071944::cell periphery confident hh_2kwh_A_1::93-113 portable psy15615 904 P61008::Signal peptidase complex subunit 3 ::Component of the microsomal signal peptidase complex which removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum.::Canis familiaris (taxid: 9615) confident no hit no match PF04573::SPC22 100.00::165-279 GO:0005783::endoplasmic reticulum confident rp_3h0g_A_2::394-422,424-475,479-539,548-571,578-607,621-676 portable psy12841 88 Q08CY9::EGF domain-specific O-linked N-acetylglucosamine transferase ::::Xenopus tropicalis (taxid: 8364) confident no hit no match PF04577::DUF563 94.47::6-84 GO:0005788::endoplasmic reticulum lumen confident no hit no match psy12177 163 Q9CQJ1::HIG1 domain family member 2A ::::Mus musculus (taxid: 10090) confident no hit no match PF04588::HIG_1_N 99.84::102-155 GO:0044763::single-organism cellular process confident hh_2lom_A_1::91-163 very confident psy6425 68 Q9ZUA0::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B ::Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF04597::Ribophorin_I 99.95::2-68 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy6410 169 Q9GMB0::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 ::Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.::Sus scrofa (taxid: 9823) confident no hit no match PF04597::Ribophorin_I 100.00::2-169 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy4031 115 Q9SFX3::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A ::Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF04597::Ribophorin_I 100.00::4-114 GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy11170 111 Q96253::ATP synthase subunit epsilon, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and of the central stalk which is part of the complex rotary element. Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits.::Arabidopsis thaliana (taxid: 3702) portable no hit no match PF04627::ATP-synt_Eps 99.92::30-78 GO:0045261::proton-transporting ATP synthase complex, catalytic core F(1) confident hh_3oee_I_1::31-86 very confident psy10259 135 Q9W1K5::Sestrin homolog ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04636::PA26 100.00::47-135 GO:0002121::inter-male aggressive behavior confident no hit no match psy6065 316 Q5R5W5::Vacuolar protein sorting-associated protein VTA1 homolog ::Involved in the endosomal multivesicular bodies (MVB) pathway. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. Thought to be a cofactor of VPS4A/B, which catalyzes disassembles membrane-associated ESCRT-III assemblies. Involved in the sorting and down-regulation of EGFR.::Pongo abelii (taxid: 9601) confident no hit no match PF04652::DUF605 100.00::13-171 GO:0005737::cytoplasm confident hh_2lxl_A_1::1-171 very confident psy7199 146 Q6NVR1::Alpha-endosulfine ::Protein phosphatase inhibitor that specifically inhibits protein phosphatase 2A (PP2A) during mitosis. When phosphorylated at Ser-67 during mitosis, specifically interacts with ppp2r2d (PR55-delta) and inhibits its activity, leading to inactivation of PP2A, an essential condition to keep cyclin-B1-CDK1 activity high during M phase.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF04667::Endosulfine 99.87::20-75 GO:0035308::negative regulation of protein dephosphorylation confident no hit no match psy17801 97 Q98T89::Twisted gastrulation protein homolog 1 ::May be involved in dorsoventral axis formation. Seems to antagonize BMP signaling by forming ternary complexes with CHRD and BMPs, thereby preventing BMPs from binding to their receptors. In addition to the anti-BMP function, also has pro-BMP activity, partly mediated by cleavage and degradation of CHRD, which releases BMPs from ternary complexes. May be an important modulator of BMP-regulated cartilage development and chondrocyte differentiation. May play a role in thymocyte development.::Gallus gallus (taxid: 9031) confident no hit no match PF04668::Tsg 100.00::12-76 GO:0009790::embryo development confident no hit no match psy9254 167 Q9BVG4::Protein PBDC1 ::::Homo sapiens (taxid: 9606) confident no hit no match PF04669::Polysacc_synt_4 100.00::33-157 GO:0005829::cytosol confident hh_2jyn_A_1::21-159 very confident psy9523 107 Q99K70::Ras-related GTP-binding protein C ::Has guanine nucleotide-binding activity but weak intrinsic GTPase activity. Probably required for the amino acid-induced relocalization of mTORC1 to the lysosomes and its subsequent activation by the GTPase RHEB. This is a crucial step in the activation of the TOR signaling cascade by amino acids.::Mus musculus (taxid: 10090) confident no hit no match PF04670::Gtr1_RagA 100.00::18-95 GO:0046982::protein heterodimerization activity confident hh_3r7w_B_1::9-107 very confident psy14771 64 Q7L523::Ras-related GTP-binding protein A ::Has guanine nucleotide-binding activity but undetectable intrinsic GTPase activity. Required for the amino acid-induced relocalization of mTORC1 to the lysosomes and its subsequent activation by the GTPase RHEB. This is a crucial step in the activation of the TOR signaling cascade by amino acids. Involved in the RCC1/Ran-GTPase pathway. May play a direct role in a TNF-alpha signaling pathway leading to induction of cell death. May alternatively act as a cellular target for adenovirus E3-14.7K, an inhibitor of TNF-alpha functions, thereby affecting cell death.::Homo sapiens (taxid: 9606) confident no hit no match PF04670::Gtr1_RagA 99.30::1-38 GO:0071230::cellular response to amino acid stimulus confident hh_3r7w_A_1::1-58 very confident psy16466 101 Q08BI9::Calcium uniporter protein, mitochondrial ::Mitochondrial inner membrane calcium transporter that mediates calcium uptake into mitochondrion.::Danio rerio (taxid: 7955) confident no hit no match PF04678::DUF607 98.49::2-36 GO:0015292::uniporter activity confident no hit no match psy11404 251 Q6NZ09::Proteasomal ubiquitin receptor ADRM1 ::Functions as a proteasomal ubiquitin receptor. Promotes the deubiquitinating activity associated with the 26S proteasome.::Danio rerio (taxid: 7955) confident no hit no match PF04683::Proteasom_Rpn13 100.00::1-82 GO:0061133::endopeptidase activator activity confident no hit no match psy11405 76 Q6P877::Proteasomal ubiquitin receptor ADRM1 ::Functions as a proteasomal ubiquitin receptor. Promotes the deubiquitinating activity associated with the 26S proteasome.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF04683::Proteasom_Rpn13 99.83::26-72 GO:0061133::endopeptidase activator activity confident rp_2r2y_A_1::3-68 very confident psy2476 151 Q3SYX9::Actin-related protein 2/3 complex subunit 5 ::Functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.::Bos taurus (taxid: 9913) very confident no hit no match PF04699::P16-Arc 100.00::8-151 GO:0030027::lamellipodium very confident hh_1k8k_G_1::1-32,35-151 very confident psy2572 264 Q9V579::Protein preli-like ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04707::PRELI 100.00::61-213 GO:0030061::mitochondrial crista confident hh_1kcm_A_1::79-133,136-140,142-152,154-206 portable psy14446 125 Q9Y3B1::Protein slowmo homolog 2 ::::Homo sapiens (taxid: 9606) confident no hit no match PF04707::PRELI 100.00::1-125 GO:0031314::extrinsic to mitochondrial inner membrane confident hh_1kcm_A_1::7-42,44-53,55-68,70-79,81-85 portable psy1498 122 O77237::Protein pellino ::Scaffold protein involved in the Toll signaling pathway via its interaction with pelle/pll kinase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04710::Pellino 100.00::14-102 GO:0043234::protein complex confident hh_3ega_A_1::14-92,94-102 very confident psy16787 120 P23935::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Bos taurus (taxid: 9913) very confident no hit no match PF04716::ETC_C1_NDUFA5 99.94::15-71 GO:0005747::mitochondrial respiratory chain complex I confident hh_1w1n_A_1::71-97 portable psy1160 121 P23935::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Bos taurus (taxid: 9913) very confident no hit no match PF04716::ETC_C1_NDUFA5 99.94::16-72 GO:0005747::mitochondrial respiratory chain complex I confident hh_1w1n_A_1::72-98 portable psy9715 92 O75964::ATP synthase subunit g, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the membrane.::Homo sapiens (taxid: 9606) very confident no hit no match PF04718::ATP-synt_G 100.00::2-92 GO:0006200::ATP catabolic process very confident no hit no match psy16482 493 Q8IZ81::ELMO domain-containing protein 2 ::Acts as a GTPase-activating protein (GAP) toward guanine nucleotide exchange factors like ARL2, ARL3, ARF1 and ARF6, but not for GTPases outside the Arf family. Regulates IFN-related antiviral responses.::Homo sapiens (taxid: 9606) portable no hit no match PF04727::ELMO_CED12 100.00::305-467 GO:0005743::mitochondrial inner membrane confident hh_2lql_A_1::25-96,99-126 confident psy10784 69 Q9VA70::Neutral ceramidase ::Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid at an optimal pH of 6.5-7.5. Acts as a key regulator of sphingolipid signaling metabolites by generating sphingosine at the cell surface. Regulates synaptic vesicle exocytosis and trafficking by controlling presynaptic terminal sphingolipid composition.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04734::Ceramidase_alk 99.82::1-69 GO:0005576::extracellular region confident hh_2zws_A_1::1-63,66-69 very confident psy10777 246 Q9VA70::Neutral ceramidase ::Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid at an optimal pH of 6.5-7.5. Acts as a key regulator of sphingolipid signaling metabolites by generating sphingosine at the cell surface. Regulates synaptic vesicle exocytosis and trafficking by controlling presynaptic terminal sphingolipid composition.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF04734::Ceramidase_alk 100.00::1-246 GO:0005774::vacuolar membrane confident hh_2zws_A_1::1-21,23-23,27-59,61-134,173-227,232-246 very confident psy15184 160 Q9R078::5'-AMP-activated protein kinase subunit beta-1 ::Non-catalytic subunit of AMP-activated protein kinase (AMPK), an energy sensor protein kinase that plays a key role in regulating cellular energy metabolism. In response to reduction of intracellular ATP levels, AMPK activates energy-producing pathways and inhibits energy-consuming processes: inhibits protein, carbohydrate and lipid biosynthesis, as well as cell growth and proliferation. AMPK acts via direct phosphorylation of metabolic enzymes, and by longer-term effects via phosphorylation of transcription regulators. Also acts as a regulator of cellular polarity by remodeling the actin cytoskeleton; probably by indirectly activating myosin. Beta non-catalytic subunit acts as a scaffold on which the AMPK complex assembles, via its C-terminus that bridges alpha (PRKAA1 or PRKAA2) and gamma subunits (PRKAG1, PRKAG2 or PRKAG3).::Mus musculus (taxid: 10090) confident no hit no match PF04739::AMPKBI 100.00::72-160 GO:0004679::AMP-activated protein kinase activity confident hh_2v8q_B_1::75-160 very confident psy17874 144 Q2KID7::Oligosaccharyltransferase complex subunit OSTC ::::Bos taurus (taxid: 9913) very confident no hit no match PF04756::OST3_OST6 99.87::11-138 GO:0008250::oligosaccharyltransferase complex very confident no hit no match psy6704 332 Q16585::Beta-sarcoglycan ::Component of the sarcoglycan complex, a subcomplex of the dystrophin-glycoprotein complex which forms a link between the F-actin cytoskeleton and the extracellular matrix.::Homo sapiens (taxid: 9606) confident no hit no match PF04790::Sarcoglycan_1 100.00::51-320 GO:0042383::sarcolemma confident no hit no match psy7799 83 no hit no match no hit no match PF04799::Fzo_mitofusin 100.00::1-82 GO:0044763::single-organism cellular process confident no hit no match psy627 89 Q02375::NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Bos taurus (taxid: 9913) confident no hit no match PF04800::ETC_C1_NDUFA4 100.00::1-86 GO:0051591::response to cAMP confident hh_2lju_A_1::1-84 very confident psy1734 610 P40164::Serine/threonine-protein phosphatase 4 regulatory subunit 3 ::Core regulatory subunit of the histone H2A phosphatase complex, which dephosphorylates H2AS128ph (gamma-H2A) that has been displaced from sites of DNA lesions in the double-stranded DNA break repair process. Dephosphorylation is necessary for efficient recovery from the DNA damage checkpoint.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF04802::SMK-1 100.00::129-291 GO:0030289::protein phosphatase 4 complex confident hh_1rrp_B_1::2-65 portable psy9417 161 Q6DID3::Protein SCAF8 ::May play a role in mRNA processing.::Mus musculus (taxid: 10090) confident no hit no match PF04818::CTD_bind 98.60::112-159 GO:0005730::nucleolus confident hh_3d9j_A_1::56-160 very confident psy15160 366 Q9NQG5::Regulation of nuclear pre-mRNA domain-containing protein 1B ::Interacts with phosphorylated C-terminal heptapeptide repeat domain (CTD) of the largest RNA polymerase II subunit POLR2A, and participates in dephosphorylation of the CTD. Transcriptional regulator which enhances expression of CCND1. Promotes binding of RNA polymerase II to the CCDN1 promoter and to the termination region before the poly-A site but decreases its binding after the poly-A site. Prevents RNA polymerase II from reading through the 3' end termination site and may allow it to be recruited back to the promoter through promotion of the formation of a chromatin loop. Also enhances the transcription of a number of other cell cycle-related genes including CDK2, CDK4, CDK6 and cyclin-E but not CDKN1A, CDKN1B or cyclin-A. Promotes cell proliferation.::Homo sapiens (taxid: 9606) portable no hit no match PF04818::CTD_bind 99.75::56-119 GO:0016591::DNA-directed RNA polymerase II, holoenzyme confident hh_4fu3_A_1::2-93,95-131 very confident psy5527 269 Q9R1X4::Protein timeless homolog ::Required for normal progression of S-phase. Involved in the circadian rhythm autoregulatory loop. Negatively regulates CLOCK-NPAS2/BMAL1-induced transactivation of PER1 possibly via translocation of PER1 into the nucleus. Promotes TIPIN nuclear localiZation. Involved in cell survival after DNA damage or replication stress. May be specifically required for the ATR-CHEK1 pathway in the replication checkpoint induced by hydroxyurea or ultraviolet light. May also play an important role in epithelial cell morphogenesis and formation of branching tubules.::Mus musculus (taxid: 10090) portable no hit no match PF04821::TIMELESS 100.00::21-248 GO:0065007::biological regulation confident rp_1vt4_I_1::20-37,44-46,51-61,64-75,84-104,107-153,155-156,158-162,167-172,175-177,185-187,191-214,222-259 portable psy8283 285 A2AU37::Double-strand-break repair protein rad21-like protein 1 ::Meiosis-specific component of some cohesin complex. Probably required during early meiosis for separation of sister chromatids and homologous chromosomes. Replaces RAD21 in premeiotic S phase (during early stages of prophase I), while RAD21 reappears in later stages of prophase I. May be involved in synapsis initiation and crossover recombination between homologous chromosomes.::Mus musculus (taxid: 10090) portable no hit no match PF04825::Rad21_Rec8_N 100.00::1-111 GO:0005705::polytene chromosome interband confident no hit no match psy8289 91 Q3SWX9::Double-strand-break repair protein rad21 homolog ::Cleavable component of the cohesin complex, involved in chromosome cohesion during cell cycle, in DNA repair, and in apoptosis. Plays a role in apoptosis, via its cleavage by caspase-3/CASP3 or caspase-7/CASP7 during early steps of apoptosis: the C-terminal 64 kDa cleavage product may act as a nuclear signal to initiate cytoplasmic events involved in the apoptotic pathway. The cohesin complex is required for the cohesion of sister chromatids after DNA replication. The cohesin complex apparently forms a large proteinaceous ring within which sister chromatids can be trapped. At metaphase-anaphase transition, this protein is cleaved by separase/ESPL1 and dissociates from chromatin, allowing sister chromatids to segregate. The cohesin complex may also play a role in spindle pole assembly during mitosis.::Bos taurus (taxid: 9913) confident no hit no match PF04825::Rad21_Rec8_N 99.97::1-87 GO:0034991::nuclear meiotic cohesin complex confident no hit no match psy10510 91 Q00577::Transcriptional activator protein Pur-alpha ::This is a probable transcription activator that specifically binds the purine-rich single strand of the PUR element located upstream of the MYC gene. May play a role in the initiation of DNA replication and in recombination.::Homo sapiens (taxid: 9606) portable no hit no match PF04845::PurA 99.96::19-91 GO:0005634::nucleus confident hh_3k44_A_2::20-81 very confident psy10506 435 Q00577::Transcriptional activator protein Pur-alpha ::This is a probable transcription activator that specifically binds the purine-rich single strand of the PUR element located upstream of the MYC gene. May play a role in the initiation of DNA replication and in recombination.::Homo sapiens (taxid: 9606) portable no hit no match PF04845::PurA 100.00::112-380 GO:0005662::DNA replication factor A complex confident hh_3k44_A_1::111-255 very confident psy524 111 no hit no match no hit no match PF04849::HAP1_N 94.84::22-93 GO:0005737::cytoplasm confident hh_3s4r_A_1::14-91 confident psy15038 67 Q6PD31::Trafficking kinesin-binding protein 1 ::Involved in the regulation of endosome-to-lysosome trafficking, including endocytic of EGF-EGFR complexes and GABA-A receptors.::Mus musculus (taxid: 10090) confident no hit no match PF04849::HAP1_N 99.59::17-67 GO:0006605::protein targeting confident no hit no match psy15689 295 Q24134::Negative elongation factor D ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex, causes transcriptional pausing.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04858::TH1 100.00::1-295 GO:0017053::transcriptional repressor complex confident rp_1vt4_I_1::28-54,65-75,77-90,92-109,115-122,128-143,146-162,170-173,179-182,187-228,233-239,246-260,269-292 portable psy15695 299 Q24134::Negative elongation factor D ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex, causes transcriptional pausing.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04858::TH1 100.00::12-297 GO:0017053::transcriptional repressor complex confident rp_1vt4_I_1::41-74,76-84,88-97,102-112,115-119,125-164,174-182,186-224,233-269 portable psy15691 620 Q24134::Negative elongation factor D ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex, causes transcriptional pausing.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF04858::TH1 100.00::1-578 GO:0017053::transcriptional repressor complex very confident rp_1vt4_I_1::28-54,65-75,77-90,92-109,115-122,128-162,170-173,179-182,187-228,233-239,246-260,269-353,365-451,455-458,463-475,479-484 portable psy15694 81 Q24134::Negative elongation factor D ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex, causes transcriptional pausing.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04858::TH1 99.90::1-81 GO:0017053::transcriptional repressor complex confident no hit no match psy14736 85 P00516::cGMP-dependent protein kinase 1 ::Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.::Bos taurus (taxid: 9913) portable no hit no match PF04859::DUF641 95.76::6-47 GO:0009744::response to sucrose stimulus confident hh_1zxa_A_1::5-53 very confident psy13327 154 O60763::General vesicular transport factor p115 ::General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity.::Homo sapiens (taxid: 9606) confident no hit no match PF04869::Uso1_p115_head 99.82::84-153 GO:0005829::cytosol confident hh_3grl_A_1::7-152 very confident psy15443 73 O60763::General vesicular transport factor p115 ::General vesicular transport factor required for intercisternal transport in the Golgi stack; it is required for transcytotic fusion and/or subsequent binding of the vesicles to the target membrane. May well act as a vesicular anchor by interacting with the target membrane and holding the vesicular and target membranes in proximity.::Homo sapiens (taxid: 9606) portable no hit no match PF04869::Uso1_p115_head 99.04::1-55 GO:0044763::single-organism cellular process confident hh_3grl_A_1::2-60 very confident psy11615 224 P83094::Stromal interaction molecule homolog ::Plays a role in mediating Ca(2+) influx following depletion of intracellular Ca(2+) stores.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04880::NUDE_C 95.24::97-169 GO:0005783::endoplasmic reticulum confident hh_3teq_A_2::5-60 very confident psy2931 95 Q5BJP2::Spliceosome-associated protein CWC15 homolog ::Involved in pre-mRNA splicing.::Rattus norvegicus (taxid: 10116) confident no hit no match PF04889::Cwf_Cwc_15 100.00::1-75 GO:0071013::catalytic step 2 spliceosome confident no hit no match psy12795 121 Q0JKD0::Glutamate synthase 1 [NADH], chloroplastic ::Involved in glutamate biosynthesis and plays a major role in the primary ammonium ions assimilation in seedling roots. May be involved in the reutilization of glutamine in developing organs. Plays a role in the development of tillers.::Oryza sativa subsp. japonica (taxid: 39947) portable no hit no match PF04898::Glu_syn_central 100.00::1-118 GO:0009570::chloroplast stroma confident hh_1ea0_A_1::1-26,45-101,104-118 very confident psy1866 235 Q13506::NGFI-A-binding protein 1 ::Acts as a transcriptional repressor for zinc finger transcription factors EGR1 and EGR2.::Homo sapiens (taxid: 9606) confident no hit no match PF04904::NCD1 100.00::6-86 GO:0006355::regulation of transcription, DNA-dependent confident hh_2yuf_A_1::156-227 confident psy9591 399 Q6AYH5::Dynactin subunit 2 ::Modulates cytoplasmic dynein binding to an organelle, and plays a role in prometaphase chromosome alignment and spindle organization during mitosis. Involved in anchoring microtubules to centrosomes. May play a role in synapse formation during brain development.::Rattus norvegicus (taxid: 10116) confident no hit no match PF04912::Dynamitin 100.00::21-398 GO:0005813::centrosome very confident rp_1vt4_I_1::10-23,28-70,85-100,109-148,157-177,189-243,246-249,253-269,271-301,306-308,311-368 portable psy10437 619 Q10254::Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase ::Adds the third glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Glc(2)Man(9)GlcNAc(2)-PP-Dol.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident no hit no match PF04922::DIE2_ALG10 100.00::131-557 GO:0005783::endoplasmic reticulum confident hh_2x24_A_1::105-118,126-140,144-149,151-152,154-173,182-182,186-202,204-222 confident psy15499 151 Q92982::Ninjurin-1 ::Homophilic cell adhesion molecule that promotes axonal growth. May play a role in nerve regeneration and in the formation and function of other tissues. Cell adhesion requires divalent cations.::Homo sapiens (taxid: 9606) confident no hit no match PF04923::Ninjurin 100.00::8-114 GO:0044699::single-organism process confident no hit no match psy5725 117 P04052::DNA-directed RNA polymerase II subunit RPB1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB1 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template. At the start of transcription, a single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol II. A bridging helix emanates from RPB1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol II by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition. During transcription elongation, Pol II moves on the template as the transcript elongates. Elongation is influenced by the phosphorylation status of the C-terminal domain (CTD) of Pol II largest subunit (RPB1), which serves as a platform for assembly of factors that regulate transcription initiation, elongation, termination and mRNA processing.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF04992::RNA_pol_Rpb1_6 99.96::5-92 GO:0005703::polytene chromosome puff confident hh_3h0g_A_1::13-115 very confident psy3549 206 Q5RBL6::Golgi SNAP receptor complex member 1 ::Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. May play a protective role against hydrogen peroxide induced cytotoxicity under glutathione depleted conditions in neuronal cells by regulating the intracellular ROS levels via inhibition of p38 MAPK (MAPK11, MAPK12, MAPK13 and MAPK14). Participates in docking and fusion stage of ER to cis-Golgi transport. Plays an important physiological role in VLDL-transport vesicle-Golgi fusion and thus in VLDL delivery to the hepatic cis-Golgi.::Pongo abelii (taxid: 9601) confident no hit no match PF05008::V-SNARE 93.95::115-175 GO:0016021::integral to membrane confident hh_1vcs_A_1::116-170 portable psy14578 270 Q6PBJ2::UPF0468 protein C16orf80 homolog ::::Danio rerio (taxid: 7955) confident no hit no match PF05018::DUF667 100.00::1-189 GO:0005929::cilium confident no hit no match psy13790 193 Q6PBJ2::UPF0468 protein C16orf80 homolog ::::Danio rerio (taxid: 7955) very confident no hit no match PF05018::DUF667 100.00::1-190 GO:0005929::cilium very confident no hit no match psy12650 90 O95630::STAM-binding protein ::Zinc metalloprotease that specifically cleaves 'Lys-63'-linked polyubiquitin chains. Does not cleave 'Lys-48'-linked polyubiquitin chains (By similarity). Functions at the endosome and is able to oppose the ubiquitin-dependent sorting of receptors to lysosomes. Plays a role in signal transduction for cell growth and MYC induction mediated by IL-2 and GM-CSF. Potentiates BMP (bone morphogenetic protein) signaling by antagonizing the inhibitory action of SMAD6 and SMAD7.::Homo sapiens (taxid: 9606) confident no hit no match PF05021::NPL4 94.16::42-89 GO:0071108::protein K48-linked deubiquitination confident hh_3rzv_A_1::29-90 very confident psy4278 197 O46043::Poly(ADP-ribose) glycohydrolase ::Poly(ADP-ribose) synthesized after DNA damage is only present transiently and is rapidly degraded by poly(ADP-ribose) glycohydrolase. Poly(ADP-ribose) metabolism is required for maintenance of the normal function of neuronal cells.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF05028::PARG_cat 100.00::18-196 GO:0000785::chromatin confident hh_3uek_A_1::2-89,91-144,147-195 very confident psy10209 106 Q92786::Prospero homeobox protein 1 ::May play a fundamental role in early development of CNS. May regulate gene expression and development of postmitotic undifferentiated young neurons.::Homo sapiens (taxid: 9606) confident no hit no match PF05044::HPD 100.00::1-106 GO:0005875::microtubule associated complex confident hh_1mij_A_1::1-42,48-99 very confident psy8579 168 Q9VY28::Probable 28S ribosomal protein S25, mitochondrial ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF05047::L51_S25_CI-B8 99.70::45-96 GO:0003735::structural constituent of ribosome confident hh_1s3a_A_1::19-110 confident psy10292 168 Q9VY28::Probable 28S ribosomal protein S25, mitochondrial ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF05047::L51_S25_CI-B8 99.70::45-96 GO:0003735::structural constituent of ribosome confident hh_1s3a_A_1::19-110 confident psy15303 72 Q9FIJ2::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF05047::L51_S25_CI-B8 99.58::26-65 GO:0005747::mitochondrial respiratory chain complex I confident hh_1s3a_A_1::3-65 very confident psy15302 68 Q9FIJ2::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF05047::L51_S25_CI-B8 99.67::26-67 GO:0055114::oxidation-reduction process confident hh_1s3a_A_1::1-67 very confident psy14512 113 no hit no match no hit no match PF05051::COX17 99.81::30-72 GO:0005758::mitochondrial intermembrane space confident hh_2l0y_B_1::28-57,60-72 very confident psy12087 133 Q9WVR8::Menin ::Essential component of a MLL/SET1 histone methyltransferase (HMT) complex, a complex that specifically methylates 'Lys-4' of histone H3 (H3K4) (By similarity). Functions as a transcriptional regulator. Binds to the TERT promoter and represses telomerase expression (By similarity). Plays a role in TGFB1-mediated inhibition of cell-proliferation, possibly regulating SMAD3 transcriptional activity. Represses JUND-mediated transcriptional activation on AP1 sites, as well as that mediated by NFKB subunit RELA (By similarity). Positively regulates HOXC8 and HOXC6 gene expression (By similarity). May be involved in normal hematopoiesis through the activation of HOXA9 expression (By similarity). May be involved in DNA repair.::Rattus norvegicus (taxid: 10116) confident no hit no match PF05053::Menin 100.00::18-133 GO:0006355::regulation of transcription, DNA-dependent confident hh_3re2_A_1::13-133 very confident psy12085 391 Q9WVR8::Menin ::Essential component of a MLL/SET1 histone methyltransferase (HMT) complex, a complex that specifically methylates 'Lys-4' of histone H3 (H3K4) (By similarity). Functions as a transcriptional regulator. Binds to the TERT promoter and represses telomerase expression (By similarity). Plays a role in TGFB1-mediated inhibition of cell-proliferation, possibly regulating SMAD3 transcriptional activity. Represses JUND-mediated transcriptional activation on AP1 sites, as well as that mediated by NFKB subunit RELA (By similarity). Positively regulates HOXC8 and HOXC6 gene expression (By similarity). May be involved in normal hematopoiesis through the activation of HOXA9 expression (By similarity). May be involved in DNA repair.::Rattus norvegicus (taxid: 10116) confident no hit no match PF05053::Menin 100.00::26-391 GO:0016363::nuclear matrix confident hh_3re2_A_1::30-59,62-391 very confident psy6476 546 Q7QBW3::Eukaryotic translation initiation factor 3 subunit D ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) very confident no hit no match PF05091::eIF-3_zeta 100.00::8-525 GO:0005634::nucleus very confident no hit no match psy13378 272 Q9D113::DNL-type zinc finger protein ::::Mus musculus (taxid: 10090) confident no hit no match PF05180::zf-DNL 100.00::116-184 GO:0005739::mitochondrion confident hh_2e2z_A_1::111-166,170-187,192-199 very confident psy14383 287 Q54C16::Sphingomyelin phosphodiesterase B ::Converts sphingomyelin to ceramide.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF05184::SapB_1 95.29::41-76 GO:0005576::extracellular region confident hh_2nxf_A_1::199-251,253-268 confident psy8706 186 O60678::Protein arginine N-methyltransferase 3 ::Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins.::Homo sapiens (taxid: 9606) portable no hit no match PF05185::PRMT5 99.62::7-114 GO:0005829::cytosol confident hh_3q7e_A_1::1-37,40-120,123-137 very confident psy16078 111 Q99417::C-Myc-binding protein ::May control the transcriptional activity of MYC. Stimulates the activation of E box-dependent transcription by MYC.::Homo sapiens (taxid: 9606) confident no hit no match PF05186::Dpy-30 97.80::16-54 GO:0006355::regulation of transcription, DNA-dependent confident hh_2yy0_A_1::44-96 confident psy4075 67 Q8K3E7::Protein dpy-30 homolog ::As part of the MLL1/MLL complex it is involved in methylation and dimethylation at 'Lys-4' of histone H3. H3 'Lys-4' methylation represents a specific tag for epigenetic transcriptional activation. May also play an indirect or direct role in endosomal transport.::Rattus norvegicus (taxid: 10116) confident no hit no match PF05186::Dpy-30 98.68::43-67 GO:0048188::Set1C/COMPASS complex confident hh_3g36_A_1::36-67 very confident psy8768 268 Q9CQ61::Protein unc-50 homolog ::May be involved in cell surface expression of neuronal nicotinic receptors. Binds RNA.::Mus musculus (taxid: 10090) very confident no hit no match PF05216::UNC-50 100.00::38-265 GO:0005637::nuclear inner membrane very confident no hit no match psy9508 511 no hit no match no hit no match PF05217::STOP 95.43::420-456 GO:0005509::calcium ion binding confident no hit no match psy9511 1301 no hit no match no hit no match PF05217::STOP 96.48::380-511 GO:0031672::A band confident no hit no match psy17827 299 Q3UR85::Myelin regulatory factor ::Transcription regulator required for expression of CNS myelin genes such as Mbp and Mog, thereby playing a central role in oligodendrocyte maturation and central nervous system (CNS) myelination. Probably acts as a transcription factor that directly binds DNA and activates expression of CNS myelin genes.::Mus musculus (taxid: 10090) confident no hit no match PF05224::NDT80_PhoG 100.00::23-210 GO:0005634::nucleus confident hh_1mnn_A_1::3-17,20-69,71-99,101-143,146-151,154-161,165-212 very confident psy17420 209 Q13564::NEDD8-activating enzyme E1 regulatory subunit ::Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Necessary for cell cycle progression through the S-M checkpoint. Overexpression of NAE1 causes apoptosis through deregulation of NEDD8 conjugation.::Homo sapiens (taxid: 9606) portable no hit no match PF05237::MoeZ_MoeB 90.58::188-209 GO:0006917::induction of apoptosis confident hh_1tt5_A_1::1-51,97-209 very confident psy18016 78 P61165::Transmembrane protein 258 ::::Homo sapiens (taxid: 9606) very confident no hit no match PF05251::UPF0197 100.00::7-78 GO:0016021::integral to membrane confident no hit no match psy4583 78 P61165::Transmembrane protein 258 ::::Homo sapiens (taxid: 9606) very confident no hit no match PF05251::UPF0197 100.00::7-78 GO:0016021::integral to membrane confident no hit no match psy7349 78 Q9D8Z2::TP53-regulated inhibitor of apoptosis 1 ::Mediates cell survival by inhibiting activation of caspase-9 which prevents induction of apoptosis.::Mus musculus (taxid: 10090) confident no hit no match PF05254::UPF0203 99.97::26-78 GO:0043027::cysteine-type endopeptidase inhibitor activity involved in apoptotic process confident hh_3tgu_H_1::31-50,55-56,58-75 portable psy5415 160 O95807::Transmembrane protein 50A ::::Homo sapiens (taxid: 9606) very confident no hit no match PF05255::UPF0220 100.00::4-160 GO:0005783::endoplasmic reticulum very confident no hit no match psy7687 160 O95807::Transmembrane protein 50A ::::Homo sapiens (taxid: 9606) very confident no hit no match PF05255::UPF0220 100.00::4-160 GO:0005783::endoplasmic reticulum very confident no hit no match psy11331 780 P27682::Neuroendocrine protein 7B2 ::Acts as a molecular chaperone for PCSK2/PC2, preventing its premature activation in the regulated secretory pathway. Binds to inactive PCSK2 in the endoplasmic reticulum and facilitates its transport from there to later compartments of the secretory pathway where it is proteolytically matured and activated. Also required for cleavage of PCSK2 but does not appear to be involved in its folding. Plays a role in regulating pituitary hormone secretion. The C-terminal peptide inhibits PCSK2 in vitro.::Rattus norvegicus (taxid: 10116) portable no hit no match PF05281::Secretogranin_V 100.00::220-396 GO:0030414::peptidase inhibitor activity confident rp_1vt4_I_1::148-153,161-165,168-182,185-204,217-262,266-266,274-279,282-310,319-327,330-353,359-374,376-395,407-422,424-434,436-476,481-491,494-513,515-522,524-555,562-589,597-622,627-650,659-661,664-690,692-694,696-719 portable psy7945 288 Q80WL2::Bystin ::Required for processing of 20S pre-rRNA precursor and biogenesis of 40S ribosomal subunits.::Rattus norvegicus (taxid: 10116) portable no hit no match PF05291::Bystin 100.00::95-274 GO:0044446::intracellular organelle part confident rp_1vt4_I_1::21-46,48-127,130-134,136-155,159-177,185-204,219-222,225-248 portable psy5676 96 Q945M1::NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity). Is required for correct plant growth and development.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF05347::Complex1_LYR 99.67::22-81 GO:0005774::vacuolar membrane confident no hit no match psy11737 125 Q9CQZ5::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Mus musculus (taxid: 10090) confident no hit no match PF05347::Complex1_LYR 99.56::28-89 GO:0006979::response to oxidative stress confident no hit no match psy8045 115 Q9CQJ8::NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed to be not involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Mus musculus (taxid: 10090) portable no hit no match PF05347::Complex1_LYR 98.00::10-42 GO:0031966::mitochondrial membrane confident no hit no match psy2699 398 O43924::Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta ::Acts as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude and does so by decreasing the nucleotide dissociation rate. Stabilizes Arl3-GTP by decreasing the nucleotide dissociation.::Homo sapiens (taxid: 9606) confident no hit no match PF05351::GMP_PDE_delta 100.00::177-314 GO:0005095::GTPase inhibitor activity confident hh_3t5g_B_1::174-317 very confident psy1216 628 Q9XYQ2::Protein unc-119 homolog ::Myristoyl-binding protein that acts as a cargo adapter: specifically binds the myristoyl moiety of a subset of N-terminally myristoylated proteins and is required for their localization.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF05351::GMP_PDE_delta 100.00::441-626 GO:0008289::lipid binding confident hh_3gqq_A_1::418-477,503-559,561-628 very confident psy8971 132 Q8R1I1::Cytochrome b-c1 complex subunit 9 ::This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This subunit interacts with cytochrome c1.::Mus musculus (taxid: 10090) confident no hit no match PF05365::UCR_UQCRX_QCR9 99.96::5-58 GO:0005743::mitochondrial inner membrane confident hh_3cx5_I_1::4-61 confident psy6810 168 P24539::ATP synthase subunit b, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain and the peripheric stalk, which acts as a stator to hold the catalytic alpha(3)beta(3) subcomplex and subunit a/ATP6 static relative to the rotary elements.::Homo sapiens (taxid: 9606) confident no hit no match PF05405::Mt_ATP-synt_B 100.00::24-162 GO:0005743::mitochondrial inner membrane confident hh_2cly_A_1::3-168 very confident psy10936 410 P24387::Corticotropin-releasing factor-binding protein ::Binds CRF and inactivates it. May prevent inappropriate pituitary-adrenal stimulation in pregnancy.::Homo sapiens (taxid: 9606) portable no hit no match PF05428::CRF-BP 100.00::49-370 GO:0071495::cellular response to endogenous stimulus confident hh_4gz9_A_1::78-107,109-119,128-128,130-130,136-148,150-200 confident psy12980 609 Q62165::Dystroglycan ::Beta-dystroglycan is a transmembrane protein that plays important roles in connecting the extracellular matrix to the cytoskeleton. Acts as a cell adhesion receptor in both muscle and non-muscle tissues. Receptor for both DMD and UTRN and, through these interactions, scaffolds axin to the cytoskeleton. Also functions in cell adhesion-mediated signaling and implicated in cell polarity.::Mus musculus (taxid: 10090) portable no hit no match PF05454::DAG1 100.00::322-609 GO:0044459::plasma membrane part confident hh_1u2c_A_1::219-241,246-247,250-264,267-337,339-355,357-366 confident psy5060 145 Q5ZHN5::THAP domain-containing protein 5 ::::Gallus gallus (taxid: 9031) confident no hit no match PF05485::THAP 99.84::7-81 GO:0005634::nucleus confident hh_2d8r_A_1::7-59,62-84 very confident psy5284 180 Q8VCZ3::THAP domain-containing protein 7 ::Chromatin-associated, histone tail-binding protein that represses transcription via recruitment of HDAC3 and nuclear hormone receptor corepressors.::Mus musculus (taxid: 10090) portable no hit no match PF05485::THAP 99.89::3-88 GO:0005634::nucleus confident hh_2d8r_A_1::1-41,46-53,55-89 very confident psy9298 167 no hit no match no hit no match PF05497::Destabilase 100.00::25-159 GO:0005615::extracellular space confident hh_3ayq_A_1::21-41,43-68,82-98,108-113,117-122,127-158 very confident psy14777 158 Q24407::ATP synthase-coupling factor 6, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain and the peripheric stalk, which acts as a stator to hold the catalytic alpha(3)beta(3) subcomplex and subunit a/ATP6 static relative to the rotary elements.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF05511::ATP-synt_F6 100.00::53-148 GO:0009987::cellular process confident hh_2cly_C_1::81-133,137-157 very confident psy12238 166 Q9BW30::Tubulin polymerization-promoting protein family member 3 ::Binds tubulin and has microtubule bundling activity. May play a role in cell proliferation and mitosis.::Homo sapiens (taxid: 9606) confident no hit no match PF05517::p25-alpha 100.00::20-166 GO:0015631::tubulin binding confident hh_1wlm_A_1::18-95,97-135 very confident psy11482 172 A4IF78::Tumor necrosis factor alpha-induced protein 8 ::Acts as a negative mediator of apoptosis. Suppresses the TNF-mediated apoptosis by inhibiting caspase-8 activity but not the processing of procaspase-8, subsequently resulting in inhibition of BID cleavage and caspase-3 activation.::Bos taurus (taxid: 9913) confident no hit no match PF05527::DUF758 100.00::7-170 GO:0043027::cysteine-type endopeptidase inhibitor activity involved in apoptotic process confident hh_3f4m_A_1::30-57,70-170 very confident psy6393 315 Q8BI36::JNK1/MAPK8-associated membrane protein ::May be a regulator of the duration of MAPK8 activity in response to various stress stimuli. Facilitates degradation of misfolded endoplasmic reticulum (ER) luminal proteins through the recruitment of components of the proteasome and endoplasmic reticulum-associated degradation (ERAD) system.::Mus musculus (taxid: 10090) confident no hit no match PF05571::DUF766 100.00::6-310 GO:0030433::ER-associated protein catabolic process confident no hit no match psy5313 511 A2VE61::Cleft lip and palate transmembrane protein 1-like protein ::Enhances cisplatin-mediated apoptosis, when overexpressed.::Bos taurus (taxid: 9913) confident no hit no match PF05602::CLPTM1 100.00::10-415 GO:0006915::apoptotic process confident rp_1vt4_I_1::47-88,112-130,137-196,198-205,210-280,283-334,339-341,346-349,353-391,396-455,457-464,466-488,492-497 portable psy3738 136 O96005::Cleft lip and palate transmembrane protein 1 ::May play a role in T-cell development.::Homo sapiens (taxid: 9606) confident no hit no match PF05602::CLPTM1 100.00::14-135 GO:0009897::external side of plasma membrane confident no hit no match psy9948 203 Q7PRB5::Protein OPI10 homolog ::::Anopheles gambiae (taxid: 7165) very confident no hit no match PF05603::DUF775 100.00::1-200 GO:0005829::cytosol confident no hit no match psy11148 703 Q8V9S9::Protein B602L ::Plays an essential role in the assembly of the icosahedral capsid of the virus.::Sus scrofa (taxid: 9823) portable no hit no match PF05616::Neisseria_TspB 99.36::318-380 GO:0044464::cell part confident rp_1vt4_I_1::282-323,328-330,334-383,391-402,410-415,418-420,422-426,435-444,451-467,470-539,542-547,550-557,559-590,595-599,603-603,605-650,652-656,663-682,684-685 portable psy987 114 Q9NFU0::Fragile X mental retardation syndrome-related protein 1 ::RNA-binding protein that associates with translating ribosomes and acts as a negative translational regulator of specific mRNAs. Represses translation of futsch to regulate microtubule-dependent synaptic growth and function. Part of the RNA interference (RNAi)-related apparatus; double-stranded RNA induces potent and specific gene silencing. Regulates photoreceptor structure and neurotransmission in the eye. Required for stability of the central pair of microtubules in the spermatid axoneme.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF05641::Agenet 98.31::4-53 GO:0045947::negative regulation of translational initiation confident hh_3h8z_A_2::4-62 very confident psy985 191 Q9NFU0::Fragile X mental retardation syndrome-related protein 1 ::RNA-binding protein that associates with translating ribosomes and acts as a negative translational regulator of specific mRNAs. Represses translation of futsch to regulate microtubule-dependent synaptic growth and function. Part of the RNA interference (RNAi)-related apparatus; double-stranded RNA induces potent and specific gene silencing. Regulates photoreceptor structure and neurotransmission in the eye. Required for stability of the central pair of microtubules in the spermatid axoneme.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF05641::Agenet 98.97::40-99 GO:0048523::negative regulation of cellular process confident hh_3h8z_A_1::7-12,14-107 very confident psy10515 280 O96011::Peroxisomal membrane protein 11B ::Involved in peroxisomal proliferation. May regulate peroxisomes division by recruiting the dynamin-related GTPase DNM1L to the peroxisomal membrane.::Homo sapiens (taxid: 9606) portable no hit no match PF05648::PEX11 100.00::64-272 GO:0043234::protein complex confident no hit no match psy4036 93 no hit no match no hit no match PF05680::ATP-synt_E 99.96::5-75 GO:0005811::lipid particle confident no hit no match psy4037 153 no hit no match no hit no match PF05680::ATP-synt_E 99.92::24-89 GO:0005811::lipid particle confident no hit no match psy10617 279 Q9JHP7::KDEL motif-containing protein 1 ::::Mus musculus (taxid: 10090) portable no hit no match PF05686::Glyco_transf_90 100.00::47-275 GO:0005788::endoplasmic reticulum lumen confident hh_2di7_A_1::3-55 confident psy10679 62 Q63836::Selenium-binding protein 2 ::Selenium- and acetaminophen-binding protein which may be involved in the sensing of reactive xenobiotics in the cytoplasm. May be involved in intra-Golgi protein transport.::Mus musculus (taxid: 10090) confident no hit no match PF05694::SBP56 99.98::1-56 GO:0005829::cytosol confident hh_2ece_A_1::4-18,20-32,38-58 very confident psy14254 210 Q5RKQ0::Pre-mRNA-splicing factor SPF27 ::Involved in mRNA splicing.::Danio rerio (taxid: 7955) very confident no hit no match PF05700::BCAS2 100.00::4-210 GO:0071013::catalytic step 2 spliceosome confident hh_3vmx_A_1::169-205 portable psy12404 123 Q5RKQ0::Pre-mRNA-splicing factor SPF27 ::Involved in mRNA splicing.::Danio rerio (taxid: 7955) confident no hit no match PF05700::BCAS2 100.00::1-123 GO:0071013::catalytic step 2 spliceosome confident no hit no match psy12446 77 Q78EG7::Protein tyrosine phosphatase type IVA 1 ::Protein tyrosine phosphatase which stimulates progression from G1 into S phase during mitosis. May play a role in the development and maintenance of differentiating epithelial tissues.::Rattus norvegicus (taxid: 10116) portable no hit no match PF05706::CDKN3 98.46::25-75 GO:0044424::intracellular part confident hh_3s4o_A_1::9-76 very confident psy15819 203 Q6AYU1::Mortality factor 4-like protein 1 ::Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. The NuA4 complex ATPase and helicase activities seem to be, at least in part, contributed by the association of RUVBL1 and RUVBL2 with EP400. NuA4 may also play a direct role in DNA repair when directly recruited to sites of DNA damage. Also component of the mSin3A complex which acts to repress transcription by deacetylation of nucleosomal histones.Required for homologous recombination repair (HRR) and resistance to mitomycin C (MMC). Involved in the localization of PALB2, BRCA2 and RAD51, but not BRCA1, to DNA-damage foci.::Rattus norvegicus (taxid: 10116) confident no hit no match PF05712::MRG 100.00::67-202 GO:0006355::regulation of transcription, DNA-dependent confident hh_2f5j_A_1::67-109,111-202 very confident psy620 1290 P35443::Thrombospondin-4 ::Acts as an extracellular mitogen and stimulates early erythroid progenitors proliferation in presence of EPO. Adhesive glycoprotein that mediates cell-to-cell and cell-to-matrix interactions. Can bind to fibrinogen, fibronectin, laminin and type V collagen.::Homo sapiens (taxid: 9606) portable no hit no match PF05735::TSP_C 100.00::1015-1153 GO:0005578::proteinaceous extracellular matrix confident hh_3fby_A_1::681-693,695-702,704-776,815-1138,1140-1153 very confident psy7110 86 O15155::BET1 homolog ::Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE involved in the docking process of ER-derived vesicles with the cis-Golgi membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF05739::SNARE 99.27::30-85 GO:0016021::integral to membrane confident hh_1n7s_D_1::25-61,63-85 confident psy7111 87 O15155::BET1 homolog ::Required for vesicular transport from the ER to the Golgi complex. Functions as a SNARE involved in the docking process of ER-derived vesicles with the cis-Golgi membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF05739::SNARE 99.28::30-86 GO:0016021::integral to membrane confident hh_1n7s_D_1::25-61,63-87 confident psy13200 142 Q6PBU0::Protein FAM136A ::::Danio rerio (taxid: 7955) confident no hit no match PF05811::DUF842 100.00::3-136 GO:0005739::mitochondrion confident hh_3dxr_B_1::67-97,101-104,108-136 portable psy181 111 P25235::Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 ::Essential subunit of N-oligosaccharyl transferase enzyme which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains.::Rattus norvegicus (taxid: 10116) confident no hit no match PF05817::Ribophorin_II 100.00::1-109 GO:0005783::endoplasmic reticulum confident no hit no match psy414 176 O95169::NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Homo sapiens (taxid: 9606) confident no hit no match PF05821::NDUF_B8 100.00::16-174 GO:0005739::mitochondrion confident rp_1vt4_I_1::1-4,9-13,19-28,30-55,57-69,73-78,80-91,94-99,103-103,106-107,115-159,161-173 portable psy15236 176 O95169::NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Homo sapiens (taxid: 9606) confident no hit no match PF05821::NDUF_B8 100.00::16-174 GO:0005739::mitochondrion confident rp_1vt4_I_1::1-4,9-13,19-28,30-55,57-69,73-78,80-91,94-99,103-103,106-107,115-159,161-173 portable psy7974 135 Q1JPB9::Group 3 secretory phospholipase A2 ::PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Shows an 11-fold preference for phosphatidylglycerol over phosphatidylcholine (PC). Preferential cleavage: 1-palmitoyl-2-linoleoyl-phosphatidylethanolamine (PE) > 1-palmitoyl-2-linoleoyl-PC > 1-palmitoyl-2-arachidonoyl-PC > 1-palmitoyl-2-archidonoyl-PE. Plays a role in ciliogenesis.::Bos taurus (taxid: 9913) portable no hit no match PF05826::Phospholip_A2_2 99.96::67-128 GO:0003104::positive regulation of glomerular filtration confident hh_1poc_A_1::66-128 very confident psy16929 172 Q1JPB9::Group 3 secretory phospholipase A2 ::PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Shows an 11-fold preference for phosphatidylglycerol over phosphatidylcholine (PC). Preferential cleavage: 1-palmitoyl-2-linoleoyl-phosphatidylethanolamine (PE) > 1-palmitoyl-2-linoleoyl-PC > 1-palmitoyl-2-arachidonoyl-PC > 1-palmitoyl-2-archidonoyl-PE. Plays a role in ciliogenesis.::Bos taurus (taxid: 9913) portable no hit no match PF05826::Phospholip_A2_2 100.00::56-133 GO:0003104::positive regulation of glomerular filtration confident hh_1poc_A_1::55-140,143-167 very confident psy15606 80 Q1JPB9::Group 3 secretory phospholipase A2 ::PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Shows an 11-fold preference for phosphatidylglycerol over phosphatidylcholine (PC). Preferential cleavage: 1-palmitoyl-2-linoleoyl-phosphatidylethanolamine (PE) > 1-palmitoyl-2-linoleoyl-PC > 1-palmitoyl-2-arachidonoyl-PC > 1-palmitoyl-2-archidonoyl-PE. Plays a role in ciliogenesis.::Bos taurus (taxid: 9913) portable no hit no match PF05826::Phospholip_A2_2 100.00::16-80 GO:0004623::phospholipase A2 activity confident hh_1poc_A_1::15-80 very confident psy7972 303 Q1JPB9::Group 3 secretory phospholipase A2 ::PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Shows an 11-fold preference for phosphatidylglycerol over phosphatidylcholine (PC). Preferential cleavage: 1-palmitoyl-2-linoleoyl-phosphatidylethanolamine (PE) > 1-palmitoyl-2-linoleoyl-PC > 1-palmitoyl-2-arachidonoyl-PC > 1-palmitoyl-2-archidonoyl-PE. Plays a role in ciliogenesis.::Bos taurus (taxid: 9913) portable no hit no match PF05826::Phospholip_A2_2 100.00::67-168 GO:0005509::calcium ion binding confident hh_1poc_A_1::66-141,145-168 very confident psy16934 96 Q1JPB9::Group 3 secretory phospholipase A2 ::PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Shows an 11-fold preference for phosphatidylglycerol over phosphatidylcholine (PC). Preferential cleavage: 1-palmitoyl-2-linoleoyl-phosphatidylethanolamine (PE) > 1-palmitoyl-2-linoleoyl-PC > 1-palmitoyl-2-arachidonoyl-PC > 1-palmitoyl-2-archidonoyl-PE. Plays a role in ciliogenesis.::Bos taurus (taxid: 9913) portable no hit no match PF05826::Phospholip_A2_2 100.00::18-83 GO:0005576::extracellular region confident hh_1poc_A_1::17-82 very confident psy10618 339 Q9HBL0::Tensin-1 ::May be involved in cell migration, cartilage development and in linking signal transduction pathways to the cytoskeleton.::Homo sapiens (taxid: 9606) confident no hit no match PF05826::Phospholip_A2_2 100.00::64-117 GO:0005925::focal adhesion confident hh_3hqc_A_1::186-282,290-314 very confident psy7398 463 Q9VYV5::Alpha-(1,6)-fucosyltransferase ::Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF05830::NodZ 99.95::105-369 GO:0016477::cell migration confident hh_2de0_X_1::1-35,39-207,215-463 very confident psy16352 905 Q5NVB3::Alpha-(1,6)-fucosyltransferase ::Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans.::Pongo abelii (taxid: 9601) confident no hit no match PF05830::NodZ 99.91::405-673 GO:0036065::fucosylation confident hh_2de0_X_1::28-77,81-326,583-677,716-794 very confident psy1897 473 Q9N0W2::Alpha-(1,6)-fucosyltransferase ::Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans.::Bos taurus (taxid: 9913) confident no hit no match PF05830::NodZ 99.95::108-374 GO:0036065::fucosylation confident hh_2de0_X_1::8-469 very confident psy15675 202 Q8IQC1::Uncharacterized Golgi apparatus membrane protein-like protein CG5021 ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF05832::DUF846 100.00::34-177 GO:0005783::endoplasmic reticulum confident no hit no match psy9053 168 Q148J6::Actin-related protein 2/3 complex subunit 4 ::Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks. Seems to contact the mother actin filament.::Bos taurus (taxid: 9913) very confident no hit no match PF05856::ARPC4 100.00::1-168 GO:0005885::Arp2/3 protein complex very confident hh_1k8k_F_1::1-168 very confident psy14016 71 Q6NWF4::Vacuolar protein-sorting-associated protein 25 ::Component of the ESCRT-II complex (endosomal sorting complex required for transport II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. The MVB pathway mediates delivery of transmembrane proteins into the lumen of the lysosome for degradation. The ESCRT-II complex is probably involved in the recruitment of the ESCRT-III complex.::Danio rerio (taxid: 7955) confident no hit no match PF05871::ESCRT-II 100.00::8-71 GO:0010797::regulation of multivesicular body size involved in endosome transport confident hh_3cuq_C_1::1-71 very confident psy9636 181 P13620::ATP synthase subunit d, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain and the peripheric stalk, which acts as a stator to hold the catalytic alpha(3)beta(3) subcomplex and subunit a/ATP6 static relative to the rotary elements.::Bos taurus (taxid: 9913) confident no hit no match PF05873::Mt_ATP-synt_D 100.00::2-161 GO:0016887::ATPase activity confident hh_2cly_B_1::2-150,152-161 very confident psy17659 195 Q9WV92::Band 4.1-like protein 3 ::Isoform 2 (heart-specific) has the complete spectrin--actin-binding (SAB) domain and fully interacts with spectrin and actin.::Mus musculus (taxid: 10090) portable no hit no match PF05902::4_1_CTD 100.00::70-193 GO:0043234::protein complex confident no hit no match psy18161 209 Q5XIT6::Desumoylating isopeptidase 2 ::Protease which may deconjugate SUMO from some substrate proteins.::Rattus norvegicus (taxid: 10116) confident no hit no match PF05903::Peptidase_C97 100.00::4-185 GO:0044464::cell part confident hh_2wp7_A_1::4-43,49-59,61-63,67-85,123-183 very confident psy17466 226 Q7ZV35::Mediator of RNA polymerase II transcription subunit 7 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Danio rerio (taxid: 7955) very confident no hit no match PF05983::Med7 100.00::7-166 GO:0005667::transcription factor complex confident hh_1ykh_A_1::77-103,106-166 very confident psy10169 390 O76840::Papilin ::Isoform b has a role in post embryonic distal cell tip migration. Essential extracellular matrix (ECM) protein required for hypodermal enclosure in the embryo. Isoform a has a role in embryogenesis, the second phase of distal cell tip migration and is required for distribution of the metalloproteinase, mig-17, during organogenesis.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF05986::ADAM_spacer1 99.64::3-73 GO:0005578::proteinaceous extracellular matrix confident hh_1w0r_A_1::74-91,102-155,162-169,171-225,228-237,239-274,279-287,290-334,344-345,348-388 very confident psy14790 656 P59511::A disintegrin and metalloproteinase with thrombospondin motifs 20 ::May play a role in tissue-remodeling process occurring in both normal and pathological conditions.::Mus musculus (taxid: 10090) portable no hit no match PF05986::ADAM_spacer1 99.52::316-416 GO:0005578::proteinaceous extracellular matrix confident hh_1w0r_A_1::417-449,451-501,504-526,532-558,561-591,598-607,609-611,631-635,637-653 very confident psy4860 182 O76840::Papilin ::Isoform b has a role in post embryonic distal cell tip migration. Essential extracellular matrix (ECM) protein required for hypodermal enclosure in the embryo. Isoform a has a role in embryogenesis, the second phase of distal cell tip migration and is required for distribution of the metalloproteinase, mig-17, during organogenesis.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF05986::ADAM_spacer1 100.00::34-147 GO:0030198::extracellular matrix organization confident hh_3ghm_A_1::5-44,46-78,80-151 very confident psy7103 467 Q6VNB8::WD repeat and FYVE domain-containing protein 3 ::::Mus musculus (taxid: 10090) confident no hit no match PF05994::FragX_IP 99.83::400-467 GO:0005635::nuclear envelope confident hh_3p8c_A_1::400-467 very confident psy7099 75 Q9VF87::Cytoplasmic FMR1-interacting protein ::Plays a role in guidance and morphology of central and peripheral axons and in synaptic morphology. Also required for formation of cell membrane protrusions and for bristle development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF05994::FragX_IP 99.92::2-74 GO:0045177::apical part of cell confident hh_3p8c_A_1::2-74 very confident psy7113 84 Q9VF87::Cytoplasmic FMR1-interacting protein ::Plays a role in guidance and morphology of central and peripheral axons and in synaptic morphology. Also required for formation of cell membrane protrusions and for bristle development.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF05994::FragX_IP 100.00::1-82 GO:0045177::apical part of cell very confident hh_3p8c_A_1::1-82 very confident psy5801 176 Q63357::Unconventional myosin-Id ::Myosins are actin-based motor molecules with ATPase activity. Unconventional myosins serve in intracellular movements. Their highly divergent tails are presumed to bind to membranous compartments, which would be moved relative to actin filaments.::Rattus norvegicus (taxid: 10116) portable no hit no match PF06017::Myosin_TH1 99.93::79-176 GO:0071944::cell periphery confident hh_1w1g_A_2::4-9,12-34,37-47,50-67,69-75 portable psy6462 234 Q8N5F7::NF-kappa-B-activating protein ::Acts as a transcriptional repressor. Plays a role as a transcriptional corepressor of the Notch-mediated signaling required for T-cell development. Also involved in the TNF and IL-1 induced NF-kappa-B activation. Associates with chromatin at the Notch-regulated SKP2 promoter.::Homo sapiens (taxid: 9606) confident no hit no match PF06047::SynMuv_product 100.00::126-228 GO:0031490::chromatin DNA binding confident no hit no match psy3152 402 Q9P805::mRNA-decapping enzyme subunit 1 ::Component of the decapping complex necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Decapping is the major pathway of mRNA degradation in yeast. It occurs through deadenylation, decapping and subsequent 5' to 3' exonucleolytic decay of the transcript body.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF06058::DCP1 100.00::4-124 GO:0043229::intracellular organelle confident hh_2qkl_A_1::1-58,60-124 very confident psy4616 321 Q8VCF1::Soluble calcium-activated nucleotidase 1 ::Calcium-dependent nucleotidase with a preference for UDP. The order of activity with different substrates is UDP > GDP > IDP >> UTP > CDP = GTP = ITP. Has very low activity towards ADP and even lower activity towards ATP. Does not hydrolyze AMP and GMP.::Mus musculus (taxid: 10090) confident no hit no match PF06079::Apyrase 100.00::109-321 GO:0005789::endoplasmic reticulum membrane confident hh_1s1d_A_1::71-136,138-321 very confident psy14443 235 Q96EU6::Ribosomal RNA processing protein 36 homolog ::Involved in the early processing steps of the pre-rRNA in the maturation pathway leading to the 18S rRNA.::Homo sapiens (taxid: 9606) confident no hit no match PF06102::DUF947 100.00::60-229 GO:0006364::rRNA processing confident rp_1vt4_I_1::94-151,154-183 portable psy1442 186 Q8BVF7::Gamma-secretase subunit APH-1A ::Essential subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral proteins such as Notch receptors and APP (beta-amyloid precursor protein). It probably represents a stabilizing cofactor for the presenilin homodimer that promotes the formation of a stable complex.::Mus musculus (taxid: 10090) confident no hit no match PF06105::Aph-1 100.00::2-177 GO:0007219::Notch signaling pathway confident no hit no match psy9136 186 Q8BVF7::Gamma-secretase subunit APH-1A ::Essential subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral proteins such as Notch receptors and APP (beta-amyloid precursor protein). It probably represents a stabilizing cofactor for the presenilin homodimer that promotes the formation of a stable complex.::Mus musculus (taxid: 10090) confident no hit no match PF06105::Aph-1 100.00::2-177 GO:0007219::Notch signaling pathway confident no hit no match psy12800 134 Q0KHY3::Extracellular domains-containing protein CG31004 ::::Drosophila melanogaster (taxid: 7227) portable no hit no match PF06119::NIDO 99.71::64-121 GO:0005920::smooth septate junction confident no hit no match psy12377 194 Q0KHY3::Extracellular domains-containing protein CG31004 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06119::NIDO 99.96::71-162 GO:0005920::smooth septate junction confident no hit no match psy312 90 Q7QB45::Mediator of RNA polymerase II transcription subunit 22 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Anopheles gambiae (taxid: 7165) very confident no hit no match PF06179::Med22 99.89::2-80 GO:0016592::mediator complex very confident hh_4h63_V_1::2-71,75-85 confident psy16329 215 Q29L80::PITH domain-containing protein GA19395 ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF06201::PITH 100.00::103-215 GO:0005829::cytosol confident hh_1xoy_A_1::101-132,134-171,173-208,210-215 very confident psy4191 443 Q8C4Y3::Negative elongation factor B ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex and causes transcriptional pausing, is counteracted by the P-TEFb kinase complex. May be able to induce chromatin unfolding.::Mus musculus (taxid: 10090) confident no hit no match PF06209::COBRA1 100.00::11-442 GO:0005634::nucleus confident rp_1vt4_I_1::6-21,25-67,75-78,84-90,99-132,139-143,148-187,193-217,220-225,229-251,253-271,276-279,282-332,334-376,385-390,393-401,407-432 portable psy2222 264 Q9VWA8::Protein FRG1 homolog ::May have a role in processing of pre-rRNA or in the assembly of rRNA into ribosomal subunits.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF06229::FRG1 100.00::71-262 GO:0042803::protein homodimerization activity confident hh_2yug_A_1::39-45,48-166,168-191 very confident psy7157 167 Q6AYB3::Pre-mRNA-splicing factor ISY1 homolog ::May play a role in pre-mRNA splicing.::Rattus norvegicus (taxid: 10116) confident no hit no match PF06246::Isy1 100.00::33-167 GO:0071011::precatalytic spliceosome confident bp_1x4t_A_1::49-136 very confident psy9427 324 Q20911::Probable cubilin ::Cotransporter which plays a role in lipoprotein, vitamin and iron metabolism, by facilitating their uptake.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF06247::Plasmod_Pvs28 97.92::21-217 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2bou_A_1::20-31,35-42,44-54,77-119,121-137,141-168 confident psy16240 284 Q24524::Protein singed ::Probably acts as an actin bundling protein. May have a role in the asymmetric organization and/or movement of cytoplasmic components. It has a role in somatic cells during the formation of adult bristles and hairs, and in the female germline during oogenesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06268::Fascin 99.90::116-227 GO:0031941::filamentous actin confident hh_3llp_A_2::14-76,93-178,182-198,200-227 very confident psy15563 614 Q24524::Protein singed ::Probably acts as an actin bundling protein. May have a role in the asymmetric organization and/or movement of cytoplasmic components. It has a role in somatic cells during the formation of adult bristles and hairs, and in the female germline during oogenesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06268::Fascin 99.82::37-176 GO:0031941::filamentous actin confident hh_3llp_A_2::251-428,432-469,490-537,539-570,572-593,595-613 very confident psy11343 1150 Q9NHE5::Calcium-dependent secretion activator ::Calcium-binding protein involved in exocytosis of vesicles filled with neurotransmitters and neuropeptides. May specifically mediate the Ca(2+)-dependent exocytosis of large dense-core vesicles (DCVs) and other dense-core vesicles. However, it probably also participate in small clear synaptic vesicles (SVs) exocytosis and it is unclear whether its function is related to Ca(2+) triggering.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06292::DUF1041 99.95::718-811 GO:0005509::calcium ion binding confident hh_1wi1_A_1::147-214 very confident psy15166 90 Q5RC52::Testin ::Scaffold protein that may play a role in cell adhesion, cell spreading and in the reorganization of the actin cytoskeleton. Plays a role in the regulation of cell proliferation. May act as a tumor suppressor.::Pongo abelii (taxid: 9601) confident no hit no match PF06297::PET 99.97::17-87 GO:0015629::actin cytoskeleton confident no hit no match psy8090 242 Q7QJT4::Protein prickle ::Acts in a planar cell polarity (PCP) complex; polarization along the apical/basal axis of epithelial cells. PCP signaling in the wing disk requires the receptor fz and the cytoplasmic proteins dsh and pk. These act in a feedback loop leading to activation of the jnk cascade and subsequent polarized arrangement of hairs and bristles. Dgo and pk compete with one another for dsh binding, thereby modulating fz dsh activity and ensuring tight control over fz PCP signaling. Vang, stan and pk function together to regulate the establishment of tissue polarity in the adult eye.::Anopheles gambiae (taxid: 7165) confident no hit no match PF06297::PET 100.00::1-84 GO:0031398::positive regulation of protein ubiquitination confident hh_2cu8_A_1::86-103,109-156 confident psy13596 186 D3ZKU7::Biogenesis of lysosome-related organelles complex 1 subunit 1 ::May negatively regulate aerobic respiration through mitochondrial protein lysine-acetylation. May counteract the action of the deacetylase SIRT3 by acetylating and regulating proteins of the mitochondrial respiratory chain including ATP5A1 AND NDUFA9. May also be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system.::Rattus norvegicus (taxid: 10116) confident no hit no match PF06320::GCN5L1 100.00::51-178 GO:0005758::mitochondrial intermembrane space confident no hit no match psy2291 96 Q5ZKH0::General transcription factor IIH subunit 5 ::Component of the TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA and, when complexed to CAK, in RNA transcription by RNA polymerase II. Necessary for the stability of the TFIIH complex and for the presence of normal levels of TFIIH in the cell.::Gallus gallus (taxid: 9031) confident no hit no match PF06331::Tbf5 100.00::23-94 GO:0009411::response to UV confident hh_1ydl_A_1::24-34,37-95 very confident psy15123 278 O08808::Protein diaphanous homolog 1 ::Acts in a Rho-dependent manner to recruit PFY1 to the membrane. Required for the assembly of F-actin structures, such as actin cables and stress fibers. Nucleates actin filaments. Binds to the barbed end of the actin filament and slows down actin polymerization and depolymerization. Required for cytokinesis, and transcriptional activation of the serum response factor. DFR proteins couple Rho and Src tyrosine kinase during signaling and the regulation of actin dynamics. Functions as a scaffold protein for MAPRE1 and APC to stabilize microtubules and promote cell migration. Has neurite outgrowth promoting activity. The MEMO1-RHOA-DIAPH1 signaling pathway plays an important role in ERBB2-dependent stabilization of microtubules at the cell cortex. It controls the localization of APC and CLASP2 to the cell membrane, via the regulation of GSK3B activity. In turn, membrane-bound APC allows the localization of the MACF1 to the cell membrane, which is required for microtubule capture and stabilization. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape.::Mus musculus (taxid: 10090) portable no hit no match PF06367::Drf_FH3 99.96::39-239 GO:0005794::Golgi apparatus confident hh_3eg5_B_1::21-30,32-52,54-73,76-76,80-82,84-107,109-227,229-233 very confident psy16509 123 Q0IHV1::Inverted formin-2 ::::Xenopus tropicalis (taxid: 8364) portable no hit no match PF06367::Drf_FH3 99.80::9-95 GO:0005794::Golgi apparatus confident no hit no match psy8949 493 Q9VUC6::Formin-like protein CG32138 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06367::Drf_FH3 99.93::224-470 GO:0016477::cell migration confident hh_3eg5_B_1::48-69,73-88,99-101,121-123,151-151,161-238,240-256,259-334,353-353,379-380,383-389,416-467 very confident psy8357 276 Q76LL6::FH1/FH2 domain-containing protein 3 ::Actin-organizing protein that may cause stress fiber formation together with cell elongation.::Mus musculus (taxid: 10090) confident no hit no match PF06367::Drf_FH3 97.68::200-275 GO:0030837::negative regulation of actin filament polymerization confident hh_3dad_A_1::110-125,133-276 very confident psy14591 164 Q9VUC6::Formin-like protein CG32138 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06371::Drf_GBD 99.41::111-163 GO:0048812::neuron projection morphogenesis confident hh_3eg5_B_1::112-163 confident psy17567 362 P40145::Adenylate cyclase type 8 ::This is a membrane-bound, calcium-stimulable adenylyl cyclase. May be involved in learning, in memory and in drug dependence.::Homo sapiens (taxid: 9606) portable no hit no match PF06375::BLVR 91.18::66-71 GO:0031000::response to caffeine confident rp_3lvh_D_2::11-65,72-83 portable psy17997 120 P51948::CDK-activating kinase assembly factor MAT1 ::Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Involved in cell cycle control and in RNA transcription by RNA polymerase II.::Homo sapiens (taxid: 9606) portable no hit no match PF06391::MAT1 96.51::11-55 GO:0005634::nucleus confident no hit no match psy9493 175 P55302::Alpha-2-macroglobulin receptor-associated protein ::Interacts with LRP1/alpha-2-macroglobulin receptor and glycoprotein 330.::Mus musculus (taxid: 10090) portable no hit no match PF06400::Alpha-2-MRAP_N 100.00::3-120 GO:0005875::microtubule associated complex confident hh_1ov2_A_1::21-28,37-119 very confident psy15836 74 Q5J8M3::ER membrane protein complex subunit 4 ::May mediate anti-apoptotic activity.::Homo sapiens (taxid: 9606) portable no hit no match PF06417::DUF1077 99.92::36-74 GO:0072546::ER membrane protein complex confident no hit no match psy15830 106 Q5J8M3::ER membrane protein complex subunit 4 ::May mediate anti-apoptotic activity.::Homo sapiens (taxid: 9606) confident no hit no match PF06417::DUF1077 100.00::2-94 GO:0072546::ER membrane protein complex confident no hit no match psy3810 311 Q92535::Phosphatidylinositol N-acetylglucosaminyltransferase subunit C ::Part of the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.::Homo sapiens (taxid: 9606) confident no hit no match PF06432::GPI2 100.00::14-274 GO:0000506::glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex confident no hit no match psy5190 292 P53365::Arfaptin-2 ::Putative target protein of ADP-ribosylation factor. Involved in membrane ruffling.::Homo sapiens (taxid: 9606) confident no hit no match PF06456::Arfaptin 100.00::75-266 GO:0005829::cytosol confident hh_1i4d_A_1::91-200,202-278,280-292 very confident psy16402 77 Q9NRD5::PRKCA-binding protein ::Probable adapter protein that bind to and organize the subcellular localization of a variety of membrane proteins containing some PDZ recognition sequence. Involved in the clustering of various receptors, possibly by acting at the receptor internalization level. Plays a role in synaptic plasticity by regulating the trafficking and internalization of AMPA receptors. May be regulated upon PRKCA activation. May regulate heteromeric ASIC1/ASIC3 channel.::Homo sapiens (taxid: 9606) portable no hit no match PF06456::Arfaptin 99.20::1-72 GO:0043234::protein complex confident hh_1i4d_A_1::31-72 confident psy11918 285 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06459::RR_TM4-6 94.06::27-81 GO:0016021::integral to membrane confident hh_4dxw_A_1::226-282 portable psy17708 893 Q9GLX9::Spondin-1 ::Cell adhesion protein that promotes the attachment of spinal cord and sensory neuron cells and the outgrowth of neurites in vitro. May contribute to the growth and guidance of axons in both the spinal cord and the PNS (By similarity). Major factor for vascular smooth muscle cell.::Bos taurus (taxid: 9913) portable no hit no match PF06468::Spond_N 100.00::8-203 GO:0005576::extracellular region confident hh_3q13_A_1::1-30,33-184,187-207 very confident psy15312 124 Q8BMS2::Spondin-2 ::Cell adhesion protein that promotes adhesion and outgrowth of hippocampal embryonic neurons. Binds directly to bacteria and their components and functions as an opsonin for macrophage phagocytosis of bacteria. Binds bacterial lipopolysaccharide. Essential in the initiation of the innate immune response and represents a unique pattern-recognition molecule in the ECM for microbial pathogens.::Mus musculus (taxid: 10090) portable no hit no match PF06468::Spond_N 99.84::1-49 GO:0005578::proteinaceous extracellular matrix confident hh_3d34_A_1::1-62 very confident psy15313 134 Q8BMS2::Spondin-2 ::Cell adhesion protein that promotes adhesion and outgrowth of hippocampal embryonic neurons. Binds directly to bacteria and their components and functions as an opsonin for macrophage phagocytosis of bacteria. Binds bacterial lipopolysaccharide. Essential in the initiation of the innate immune response and represents a unique pattern-recognition molecule in the ECM for microbial pathogens.::Mus musculus (taxid: 10090) portable no hit no match PF06468::Spond_N 100.00::31-134 GO:0044421::extracellular region part confident hh_3d34_A_1::18-134 very confident psy17733 388 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06469::DUF1088 100.00::26-220 GO:0043025::neuronal cell body confident hh_1t77_A_1::279-329 confident psy3140 138 Q9VEX9::Histone deacetylase complex subunit SAP18 ::Involved in the tethering of the SIN3 complex to core histone proteins. Interacts with bicoid (bcd) to repress transcription of bicoid target genes in the anterior tip of the embryo; a process known as retraction. Interacts with Trl and binds to Polycomb response elements at the bithorax complex. May contribute to the regulation of other homeotic gene expressions.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF06487::SAP18 100.00::13-131 GO:0071013::catalytic step 2 spliceosome very confident hh_4a6q_A_1::11-137 very confident psy8255 117 Q24562::Splicing factor U2AF 50 kDa subunit ::Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06495::Transformer 98.58::59-83 GO:0030628::pre-mRNA 3'-splice site binding confident hh_1jmt_B_1::60-86 very confident psy17001 295 Q6PCX7::Repulsive guidance molecule A ::Member of the repulsive guidance molecule (RGM) family that performs several functions in the developing and adult nervous system. Regulates cephalic neural tube closure, inhibits neurite outgrowth and cortical neuron branching, and the formation of mature synapses. Binding to its receptor NEO1/neogenin induces activation of RHOA-ROCK1/Rho-kinase signaling pathway through UNC5B-ARHGEF12/LARG-PTK2/FAK1 cascade, leading to collapse of the neuronal growth cone and neurite outgrowth inhibition. Furthermore, RGMA binding to NEO1/neogenin leads to HRAS inactivation by influencing HRAS1-PTK2/FAK1-AKT1 pathway. It also functions as a bone morphogenetic protein (BMP) coreceptor that may signal through SMAD1, SMAD5, and SMAD8.::Mus musculus (taxid: 10090) portable no hit no match PF06534::RGM_C 100.00::97-275 GO:0005886::plasma membrane confident no hit no match psy14433 144 Q9Z2F7::BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like ::Induces apoptosis. Interacts with viral and cellular anti-apoptosis proteins. Can overcome the suppressors BCL-2 and BCL-XL, although high levels of BCL-XL expression will inhibit apoptosis. Inhibits apoptosis induced by BNIP3. Involved in mitochondrial quality control via its interaction with SPATA18/MIEAP: in response to mitochondrial damage, participates to mitochondrial protein catabolic process (also named MALM) leading to the degradation of damaged proteins inside mitochondria. May function as a tumor suppressor.::Mus musculus (taxid: 10090) portable no hit no match PF06553::BNIP3 100.00::6-130 GO:0044428::nuclear part confident hh_2j5d_A_1::83-124 confident psy9276 583 Q5TKA1::Protein lin-9 homolog ::Acts as a tumor suppressor. Inhibits DNA synthesis. Its ability to inhibit oncogenic transformation is mediated through its association with RB1. Plays a role in the expression of genes required for the G1/S transition.::Homo sapiens (taxid: 9606) confident no hit no match PF06584::DIRP 100.00::175-279 GO:0005730::nucleolus confident hh_4hcz_A_1::267-278,282-307 portable psy4431 250 Q9VBV3::Protein takeout ::Participates in a novel circadian output pathway that conveys temporal and food status information to feeding-relevant metabolisms and activities. Involved in male courtship behavior. In the brain-associated fat body, transcription is enhanced by the dsx and fru male-specific isoforms and repressed by the dsx female-specific isoform.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF06585::JHBP 100.00::1-247 GO:0005615::extracellular space confident hh_3e8t_A_1::22-24,26-33,37-75,77-77,82-118,120-175,177-248 very confident psy7348 229 Q9VBV3::Protein takeout ::Participates in a novel circadian output pathway that conveys temporal and food status information to feeding-relevant metabolisms and activities. Involved in male courtship behavior. In the brain-associated fat body, transcription is enhanced by the dsx and fru male-specific isoforms and repressed by the dsx female-specific isoform.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF06585::JHBP 100.00::1-224 GO:0005615::extracellular space confident hh_3e8t_A_1::1-3,5-12,16-55,60-96,98-225 very confident psy1508 119 Q5REB9::Myotubularin-related protein 2 ::Phosphatase that acts on lipids with a phosphoinositol headgroup. Has phosphatase activity towards phosphatidylinositol 3-phosphate and phosphatidylinositol 3,5-bisphosphate.::Pongo abelii (taxid: 9601) confident no hit no match PF06602::Myotub-related 99.94::2-57 GO:0004438::phosphatidylinositol-3-phosphatase activity confident hh_1lw3_A_1::2-118 very confident psy11381 738 Q8VE11::Myotubularin-related protein 6 ::Phosphatase that acts on lipids with a phosphoinositol headgroup. Acts as a negative regulator of KCNN4/KCa3.1 channel activity in CD4+ T-cells possibly by decreasing intracellular levels of phosphatidylinositol 3 phosphatase. Negatively regulates proliferation of reactivated CD4+ T-cells.::Mus musculus (taxid: 10090) confident no hit no match PF06602::Myotub-related 100.00::22-457 GO:0005737::cytoplasm confident hh_2yf0_A_1::19-284,312-318,336-339,343-358,375-376,395-416,447-516 very confident psy4442 655 Q5PQT2::Myotubularin-related protein 3 ::Phosphatase that acts on lipids with a phosphoinositol headgroup. Has phosphatase activity towards phosphatidylinositol 3-phosphate and phosphatidylinositol 3,5-bisphosphate. May also dephosphorylate proteins phosphorylated on Ser, Thr, and Tyr residues.::Rattus norvegicus (taxid: 10116) portable no hit no match PF06602::Myotub-related 100.00::345-655 GO:0005829::cytosol confident hh_2yf0_A_1::131-150,156-188,204-208,221-226,254-256,273-280,282-291,301-307,318-325,345-359,362-432,434-452,466-501,503-655 very confident psy11382 328 Q8VE11::Myotubularin-related protein 6 ::Phosphatase that acts on lipids with a phosphoinositol headgroup. Acts as a negative regulator of KCNN4/KCa3.1 channel activity in CD4+ T-cells possibly by decreasing intracellular levels of phosphatidylinositol 3 phosphatase. Negatively regulates proliferation of reactivated CD4+ T-cells.::Mus musculus (taxid: 10090) confident no hit no match PF06602::Myotub-related 100.00::181-263 GO:0005829::cytosol confident hh_2yf0_A_1::1-26,28-88,121-321 very confident psy2517 613 Q96QG7::Myotubularin-related protein 9 ::Probable pseudophosphatase. Contains a Gly residue instead of a conserved Cys residue in the dsPTPase catalytic loop which renders it catalytically inactive as a phosphatase.::Homo sapiens (taxid: 9606) portable no hit no match PF06602::Myotub-related 100.00::30-343 GO:0044444::cytoplasmic part confident hh_1zsq_A_2::380-447,450-465,467-613 very confident psy1514 760 Q5REB9::Myotubularin-related protein 2 ::Phosphatase that acts on lipids with a phosphoinositol headgroup. Has phosphatase activity towards phosphatidylinositol 3-phosphate and phosphatidylinositol 3,5-bisphosphate.::Pongo abelii (taxid: 9601) confident no hit no match PF06602::Myotub-related 100.00::154-608 GO:0052629::phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity confident hh_1lw3_A_1::19-117,135-273,336-414,468-710 very confident psy711 532 Q8TAA9::Vang-like protein 1 ::::Homo sapiens (taxid: 9606) confident no hit no match PF06638::Strabismus 100.00::26-532 GO:0007298::border follicle cell migration confident rp_1vt4_I_1::211-247,256-269,279-288,291-299,304-307,313-316,337-383,386-393,396-449,458-506,512-517,522-526 portable psy1625 130 Q28IN9::PRKR-interacting protein 1 homolog ::Binds double-stranded RNA.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF06658::DUF1168 100.00::1-72 GO:0004860::protein kinase inhibitor activity confident rp_2dfs_A_1::16-36,40-129 portable psy13316 546 Q2LZ37::Protein wntless ::A segment polarity gene required for wingless (wg)-dependent patterning processes, acting in both wg-sending cells and wg-target cells. In non-neuronal cells wls directs wg secretion. The wls traffic loop encompasses the Golgi, the cell surface, an endocytic compartment and a retrograde route leading back to the Golgi, and involves clathrin-mediated endocytosis and the retromer complex (a conserved protein complex consisting of Vps35 and Vps26). In neuronal cells (the larval motorneuron NMJ), the wg signal moves across the synapse via the release of wls-containing exosome-like vesicles. Postsynaptic wls is required for the trafficking of fz2 through the fz2-interacting protein Grip.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident no hit no match PF06664::MIG-14_Wnt-bd 100.00::177-500 GO:0033157::regulation of intracellular protein transport confident rp_1vt4_I_1::70-84,86-107,114-172,177-194,198-208,211-246,252-267,269-273,275-281,308-314,320-342,345-349,351-359,362-367,374-418 portable psy15026 98 Q69ZR2::E3 ubiquitin-protein ligase HECTD1 ::Probable E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in development of the head mesenchyme and neural tube closure.::Mus musculus (taxid: 10090) confident no hit no match PF06701::MIB_HERC2 99.55::67-94 GO:0001843::neural tube closure confident hh_3dkm_A_1::53-94 very confident psy187 493 Q5MJS3::Extracellular serine/threonine protein kinase FAM20C ::Calcium-binding protein which may play a role in dentin mineralization.::Mus musculus (taxid: 10090) confident no hit no match PF06702::DUF1193 100.00::102-472 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident rp_1vt4_I_1::169-178,183-204,216-282,289-292,295-298,303-313,319-333,342-385,388-438,441-461,465-468,470-471,473-483,485-491 portable psy9699 123 Q28250::Signal peptidase complex subunit 2 ::Component of the microsomal signal peptidase complex which removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum.::Canis familiaris (taxid: 9615) portable no hit no match PF06703::SPC25 100.00::2-116 GO:0016529::sarcoplasmic reticulum confident no hit no match psy1838 80 Q5R692::Bladder cancer-associated protein ::May regulate cell proliferation and coordinate apoptosis and cell cycle progression via a novel mechanism independent of both p53/TP53 and NF-kappa-B.::Pongo abelii (taxid: 9601) very confident no hit no match PF06726::BC10 99.95::1-65 GO:0006915::apoptotic process very confident no hit no match psy1480 126 Q9CQA6::Coiled-coil-helix-coiled-coil-helix domain-containing protein 1 ::::Mus musculus (taxid: 10090) confident no hit no match PF06747::CHCH 98.73::53-86 GO:0005739::mitochondrion confident hh_2lql_A_1::50-89 portable psy10895 661 A1L504::Lipase maturation factor 2 ::Involved in the maturation of specific proteins in the endoplasmic reticulum. May be required for maturation and transport of active lipoprotein lipase (LPL) through the secretory pathway.::Bos taurus (taxid: 9913) confident no hit no match PF06762::LMF1 100.00::118-573 GO:0005789::endoplasmic reticulum membrane confident rp_1vt4_I_1::275-278,281-329,333-341,356-361,365-400,402-420,424-455,463-527,535-554,557-564,566-577,580-623 portable psy17268 293 Q9V3X4::Seipin ::Is a regulator of lipid catabolism essential for adipocyte differentiation. May also be involved in the central regulation of energy homeostasis (By similarity). Necessary for correct lipid storage and lipid droplets maintenance; plays a tissue-autonomous role in controlling lipid storage in adipocytes and in preventing ectopic lipid droplet formation in non-adipose tissues. May participate in phosphatidic acid metabolism and subsequently down-regulate lipogenesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF06775::Seipin 100.00::41-242 GO:0005783::endoplasmic reticulum confident no hit no match psy7684 332 Q62415::Apoptosis-stimulating of p53 protein 1 ::Regulator that plays a central role in regulation of apoptosis via its interaction with p53/TP53. Regulates TP53 by enhancing the DNA binding and transactivation function of TP53 on the promoters of proapoptotic genes in vivo.::Mus musculus (taxid: 10090) portable no hit no match PF06785::UPF0242 94.67::36-228 GO:0030296::protein tyrosine kinase activator activity confident rp_1i84_S_1::33-174,179-195,199-257 portable psy8842 225 Q61771::Kinesin-like protein KIF3B ::Involved in tethering the chromosomes to the spindle pole and in chromosome movement. Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro.::Mus musculus (taxid: 10090) portable no hit no match PF06810::Phage_GP20 91.72::15-95 GO:0043234::protein complex confident hh_3ol1_A_1::2-83 portable psy1302 225 Q61771::Kinesin-like protein KIF3B ::Involved in tethering the chromosomes to the spindle pole and in chromosome movement. Microtubule-based anterograde translocator for membranous organelles. Plus end-directed microtubule sliding activity in vitro.::Mus musculus (taxid: 10090) portable no hit no match PF06810::Phage_GP20 91.72::15-95 GO:0043234::protein complex confident hh_3ol1_A_1::2-83 portable psy3790 253 O13989::Uncharacterized protein C26H5.07c ::::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF06814::Lung_7-TM_R 100.00::2-157 GO:0005737::cytoplasm confident no hit no match psy4283 210 Q9BUL8::Programmed cell death protein 10 ::Promotes cell proliferation. Modulates apoptotic pathways. Increases mitogen-activated protein kinase activity and MST4 activity. Important for cell migration, and for normal structure and assembly of the Golgi complex. Important for KDR/VEGFR2 signaling. Increases the stability of KDR/VEGFR2 and prevents its breakdown. Required for normal cardiovascular development. Required for normal angiogenesis, vasculogenesis and hematopoiesis during embryonic development.::Homo sapiens (taxid: 9606) very confident no hit no match PF06840::DUF1241 100.00::3-159 GO:0005829::cytosol very confident hh_3ajm_A_1::3-78,83-151,153-209 very confident psy10697 264 Q148I3::Protein kish-A ::Involved in the early part of the secretory pathway.::Bos taurus (taxid: 9913) confident no hit no match PF06842::DUF1242 99.67::203-237 GO:0005794::Golgi apparatus confident no hit no match psy16754 127 Q0IIF6::Fas apoptotic inhibitory molecule 1 ::Plays a role as an inducible effector molecule that mediates Fas resistance produced by surface Ig engagement in B cells.::Bos taurus (taxid: 9913) confident no hit no match PF06905::FAIM1 100.00::1-125 GO:0043066::negative regulation of apoptotic process confident hh_2kd2_A_1::46-126 very confident psy2692 133 Q55FR9::Coatomer subunit alpha ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF06957::COPI_C 100.00::7-132 GO:0016020::membrane confident hh_3mkr_B_1::7-132 very confident psy5286 311 P25722::Heparin sulfate O-sulfotransferase ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF06990::Gal-3-0_sulfotr 100.00::21-285 GO:0060676::ureteric bud formation confident hh_3f5f_A_1::22-262,265-291,295-311 very confident psy3618 136 P55081::Microfibrillar-associated protein 1 ::Component of the elastin-associated microfibrils.::Homo sapiens (taxid: 9606) confident no hit no match PF06991::Prp19_bind 100.00::1-121 GO:0001527::microfibril confident no hit no match psy5 128 Q9CQT9::Uncharacterized protein C20orf24 homolog ::::Mus musculus (taxid: 10090) confident no hit no match PF07019::Rab5ip 99.93::14-94 GO:0005739::mitochondrion confident hh_3mp7_B_1::5-15,24-34,38-49 portable psy12486 148 Q6GLC5::ER membrane protein complex subunit 6 ::::Xenopus tropicalis (taxid: 8364) confident no hit no match PF07019::Rab5ip 99.89::26-106 GO:0072546::ER membrane protein complex confident no hit no match psy177 608 Q32PJ3::Origin recognition complex subunit 3 ::Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.::Bos taurus (taxid: 9913) confident no hit no match PF07034::ORC3_N 100.00::73-278 GO:0072686::mitotic spindle confident hh_1fnn_A_1::135-144,147-183,185-191,193-267 portable psy11712 123 P0C606::SAGA-associated factor 29 homolog ::Involved in transcriptional regulation, through association with histone acetyltransferase (HAT) SAGA-type complexes like the TFTC-HAT, ATAC or STAGA complexes. Specifically recognizes and binds methylated 'Lys-4' of histone H3 (H3K4me), with a preference for trimethylated form (H3K4me3). In the SAGA-type complexes, required to recruit complexes to H3K4me. May be involved in MYC-mediated oncogenic transformation.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07039::DUF1325 99.92::44-121 GO:0006338::chromatin remodeling confident hh_3mea_A_1::12-59,61-121 very confident psy6948 69 P0C606::SAGA-associated factor 29 homolog ::Involved in transcriptional regulation, through association with histone acetyltransferase (HAT) SAGA-type complexes like the TFTC-HAT, ATAC or STAGA complexes. Specifically recognizes and binds methylated 'Lys-4' of histone H3 (H3K4me), with a preference for trimethylated form (H3K4me3). In the SAGA-type complexes, required to recruit complexes to H3K4me. May be involved in MYC-mediated oncogenic transformation.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07039::DUF1325 99.96::3-67 GO:0006338::chromatin remodeling confident hh_3mea_A_1::3-68 very confident psy6947 92 P0C606::SAGA-associated factor 29 homolog ::Involved in transcriptional regulation, through association with histone acetyltransferase (HAT) SAGA-type complexes like the TFTC-HAT, ATAC or STAGA complexes. Specifically recognizes and binds methylated 'Lys-4' of histone H3 (H3K4me), with a preference for trimethylated form (H3K4me3). In the SAGA-type complexes, required to recruit complexes to H3K4me. May be involved in MYC-mediated oncogenic transformation.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07039::DUF1325 100.00::1-90 GO:0006338::chromatin remodeling confident hh_3mea_A_1::1-91 very confident psy16442 116 Q9NZ63::Uncharacterized protein C9orf78 ::::Homo sapiens (taxid: 9606) confident no hit no match PF07052::Hep_59 99.97::1-90 GO:0005737::cytoplasm confident no hit no match psy5648 327 Q9NZ63::Uncharacterized protein C9orf78 ::::Homo sapiens (taxid: 9606) confident no hit no match PF07052::Hep_59 100.00::121-226 GO:0005737::cytoplasm confident rp_1vt4_I_1::16-50,56-88,97-104,110-161,165-166,173-198,205-271 portable psy12747 84 Q08013::Translocon-associated protein subunit gamma ::TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07074::TRAP-gamma 100.00::1-82 GO:0030176::integral to endoplasmic reticulum membrane confident no hit no match psy8501 195 Q297K8::Protein jagunal ::Required for endoplasmic reticulum organization and proper vesicular traffic during vitellogenesis. Required for oocyte and bristle growth.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident no hit no match PF07086::DUF1352 100.00::1-195 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy8735 115 Q91ZY6::Homologous-pairing protein 2 homolog ::Plays an important role in meiotic recombination. Stimulates DMC1-mediated strand exchange required for pairing homologous chromosomes during meiosis. The complex PSMC3IP/MND1 binds DNA, stimulates the recombinase activity of DMC1 as well as DMC1 D-loop formation from double-strand DNA. This complex stabilizes presynaptic RAD51 and DMC1 filaments formed on single strand DNA to capture double-strand DNA. This complex stimulates both synaptic and presynaptic critical steps in RAD51 and DMC1-promoted homologous pairing. May inhibit HIV-1 viral protein TAT activity and modulate the activity of proteasomes through association with PSMC3 (By similarity). Plays a role as a coactivator in nuclear receptor-mediated transcription.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07106::TBPIP 99.78::3-80 GO:0005634::nucleus confident hh_3viq_B_1::19-54,60-107 portable psy5514 124 Q503B7::B9 domain-containing protein 1 ::Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes. Required for ciliogenesis and sonic hedgehog/SHH signaling.::Danio rerio (taxid: 7955) confident no hit no match PF07162::B9-C2 100.00::15-124 GO:0005932::microtubule basal body confident hh_1gmi_A_1::31-37,40-42,52-62,66-83,89-114 portable psy4569 88 Q6DGZ1::B9 domain-containing protein 2 ::Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes.::Danio rerio (taxid: 7955) confident no hit no match PF07162::B9-C2 99.93::2-78 GO:0005932::microtubule basal body confident no hit no match psy16632 203 P29503::Protein neuralized ::Involved in neurogenesis. Interacts with other neurogenic proteins in the specification of the neuroblast versus epidermoblast cell fate.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07177::Neuralized 99.96::14-81 GO:0048471::perinuclear region of cytoplasm confident hh_2yue_A_1::8-112,139-195 very confident psy269 345 P29503::Protein neuralized ::Involved in neurogenesis. Interacts with other neurogenic proteins in the specification of the neuroblast versus epidermoblast cell fate.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07177::Neuralized 99.94::34-101 GO:0048471::perinuclear region of cytoplasm confident hh_2yue_A_1::30-190 very confident psy9638 85 Q9VHI4::Probable splicing factor 3B subunit 5 ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF07189::SF3b10 100.00::3-81 GO:0005686::U2 snRNP very confident no hit no match psy9423 1346 P15941::Mucin-1 ::The beta subunit contains a C-terminal domain which is involved in cell signaling, through phosphorylations and protein-protein interactions. Modulates signaling in ERK, SRC and NF-kappa-B pathways. In activated T-cells, influences directly or indirectly the Ras/MAPK pathway. Promotes tumor progression. Regulates TP53-mediated transcription and determines cell fate in the genotoxic stress response. Binds, together with KLF4, the PE21 promoter element of TP53 and represses TP53 activity.::Homo sapiens (taxid: 9606) portable no hit no match PF07202::Tcp10_C 95.56::152-193 GO:0043229::intracellular organelle confident rp_1rwi_B_1::13-42,46-76,80-110,114-144,148-178,182-212,216-221 portable psy4516 115 P48305::NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Bos taurus (taxid: 9913) confident no hit no match PF07225::NDUF_B4 100.00::4-115 GO:0005739::mitochondrion confident no hit no match psy5629 203 Q5R610::COMM domain-containing protein 2 ::May down-regulate activation of NF-kappa-B.::Pongo abelii (taxid: 9601) confident no hit no match PF07258::HCaRG 99.83::13-179 GO:0005515::protein binding confident hh_2lr8_A_1::33-55,57-72 portable psy17877 1262 Q9DAY5::UPF0669 protein C6orf120 homolog ::May be involved in induction of apoptosis in CD4(+) T-cells, but not CD8(+) T-cells or hepatocytes.::Mus musculus (taxid: 10090) portable no hit no match PF07271::Cytadhesin_P30 97.86::834-842 GO:0044464::cell part confident rp_3h0g_A_1::883-904,906-978,982-1029,1032-1038,1042-1148 portable psy11195 346 Q9CZQ9::Bardet-Biedl syndrome 5 protein homolog ::The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the guanosyl exchange factor (GEF) for Rab8 and then the Rab8-GTP localizes to the cilium and promotes docking and fusion of carrier vesicles to the base of the ciliary membrane.::Mus musculus (taxid: 10090) confident no hit no match PF07289::DUF1448 100.00::1-277 GO:0005932::microtubule basal body confident hh_1pfj_A_1::86-103,108-155,157-169 portable psy11196 103 Q9CZQ9::Bardet-Biedl syndrome 5 protein homolog ::The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the guanosyl exchange factor (GEF) for Rab8 and then the Rab8-GTP localizes to the cilium and promotes docking and fusion of carrier vesicles to the base of the ciliary membrane.::Mus musculus (taxid: 10090) confident no hit no match PF07289::DUF1448 100.00::4-103 GO:0005932::microtubule basal body confident hh_1zsq_A_1::11-51,55-58 portable psy17048 103 Q556K9::Dolichol phosphate-mannose biosynthesis regulatory protein ::Regulates the biosynthesis of dolichol phosphate-mannose. Essential for the ER localization and stable expression of dpm1.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF07297::DPM2 100.00::2-82 GO:0019348::dolichol metabolic process confident no hit no match psy10138 183 O00472::RNA polymerase II elongation factor ELL2 ::Elongation factor that can increase the catalytic rate of RNA polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA.::Homo sapiens (taxid: 9606) portable no hit no match PF07303::Occludin_ELL 100.00::25-179 GO:0050794::regulation of cellular process confident hh_1xaw_A_1::8-72,127-136,141-181 very confident psy17946 223 Q9Z1P6::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Mus musculus (taxid: 10090) confident no hit no match PF07347::CI-B14_5a 100.00::87-170 GO:0005739::mitochondrion confident no hit no match psy5750 286 Q14246::EGF-like module-containing mucin-like hormone receptor-like 1 ::Could be involved in cell-cell interactions.::Homo sapiens (taxid: 9606) portable no hit no match PF07474::G2F 99.29::1-63 GO:0005604::basement membrane confident hh_2vj3_A_1::65-103,113-120,123-148,151-155,163-169,172-174,176-199,209-225 very confident psy3063 110 Q568K2::Protein phosphatase 1 regulatory subunit 11 ::Inhibitor of protein phosphatase 1.::Danio rerio (taxid: 7955) confident no hit no match PF07491::PPI_Ypi1 99.97::29-83 GO:0000164::protein phosphatase type 1 complex confident no hit no match psy15971 110 Q568K2::Protein phosphatase 1 regulatory subunit 11 ::Inhibitor of protein phosphatase 1.::Danio rerio (taxid: 7955) confident no hit no match PF07491::PPI_Ypi1 99.97::29-83 GO:0000164::protein phosphatase type 1 complex confident no hit no match psy1999 177 Q8K135::Dyslexia-associated protein KIAA0319-like protein ::Possible role in axon guidance through interaction with RTN4R.::Mus musculus (taxid: 10090) confident no hit no match PF07502::MANEC 97.80::71-104 GO:0044433::cytoplasmic vesicle part confident hh_2yrl_A_1::107-150,154-177 confident psy3614 209 Q01070::Enhancer of split mgamma protein ::Transcriptional repressor of genes that require a bHLH protein for their transcription. May serve as a transcriptional regulator of the Achaete-scute complex (AS-C) genes. Contributes to the neural-epidermal lineage decision during early neurogenesis. Part of the Notch signaling pathway.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF07527::Hairy_orange 99.48::103-145 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_2db7_A_1::102-147 confident psy13711 580 Q5PPM5::Transcription factor HES-1 ::Transcriptional repressor of a subset of early mesodermal genes including myod1 and t/bra. Binds DNA on N-box motifs: 5'-CACNAG-3'. Acts as a negative regulator of myogenesis, mediating Notch signaling to repress expression of myod1.::Xenopus tropicalis (taxid: 8364) portable no hit no match PF07527::Hairy_orange 99.23::336-422 GO:0001078::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription confident hh_1a0a_A_1::271-304,306-329 confident psy14691 332 Q01071::Enhancer of split mdelta protein ::Transcriptional repressor of genes that require a bHLH protein for their transcription. May serve as a transcriptional regulator of the Achaete-scute complex (AS-C) genes. Contributes to the neural-epidermal lineage decision during early neurogenesis. Part of the Notch signaling pathway.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07527::Hairy_orange 99.32::121-163 GO:0003677::DNA binding confident hh_2db7_A_1::115-164 confident psy9717 127 Q3ZBG4::Transcription factor HES-1 ::Transcriptional repressor of genes that require a bHLH protein for their transcription. May act as a negative regulator of myogenesis by inhibiting the functions of MYOD1 and ASH1. Binds DNA on N-box motifs: 5'-CACNAG-3' with high affinity and on E-box motifs: 5'-CANNTG-3' with low affinity (By similarity). May play a role in a functional FA core complex response to DNA cross-link damage, being required for the stability and nuclear localization of FA core complex proteins, as well as for FANCD2 monoubiquitination in response to DNA damage.::Bos taurus (taxid: 9913) confident no hit no match PF07527::Hairy_orange 98.29::96-123 GO:0042826::histone deacetylase binding confident hh_4aya_A_1::44-52,58-82 portable psy2829 176 O88532::Zinc finger RNA-binding protein ::Involved in postimplantation and gastrulation stages of development. Binds to DNA and RNA. Involved in the nucleocytoplasmic shuttling of STAU2.::Mus musculus (taxid: 10090) portable no hit no match PF07528::DZF 100.00::8-128 GO:0006355::regulation of transcription, DNA-dependent confident hh_4at7_B_1::8-14,17-128 very confident psy8484 132 Q8VIK5::Platelet endothelial aggregation receptor 1 ::When overexpressed, reduces the number of both early and late non-adherent myeloid progenitor cells.::Mus musculus (taxid: 10090) portable no hit no match PF07546::EMI 98.87::3-68 GO:0048523::negative regulation of cellular process confident hh_2wg3_C_1::59-71,73-101,103-110,114-132 confident psy629 166 Q8VIJ5::Bifunctional protein NCOAT ::Possesses hyaluronidase activity (By similarity). Cleaves GlcNAc but not GalNAc from glycopeptides. Can use p-nitrophenyl-beta-GlcNAc as substrate but not p-nitrophenyl-beta-GalNAc or p-nitrophenyl-alpha-GlcNAc. Acetylates 'Lys-8' of histone H4 and 'Lys-14' of histone H3.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07555::NAGidase 100.00::1-165 GO:0044710::single-organism metabolic process confident hh_2xsa_A_1::1-166 very confident psy6049 241 P31423::Metabotropic glutamate receptor 4 ::Receptor for glutamate. The activity of this receptor is mediated by a G-protein that inhibits adenylate cyclase activity.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07562::NCD3G 99.17::119-159 GO:0044763::single-organism cellular process confident hh_2e4u_A_1::5-67,69-83,85-91,108-113,116-152 very confident psy13191 139 Q9R1N3::Sodium bicarbonate cotransporter 3 ::Electroneutral sodium- and bicarbonate-dependent cotransporter with a Na(+):HCO3(-) 1:1 stoichiometry. Regulates intracellular pH and may play a role in bicarbonate salvage in secretory epithelia. May also have an associated sodium channel activity.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07565::Band_3_cyto 99.94::61-126 GO:0008510::sodium:bicarbonate symporter activity confident hh_1hyn_P_1::26-65,67-125 very confident psy18237 1050 P35555::Fibrillin-1 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 98.50::307-346 GO:0005578::proteinaceous extracellular matrix confident hh_1uzk_A_1::575-582,584-628,639-640,653-688,718-718,724-747,766-807 very confident psy9821 78 P60882::Multiple epidermal growth factor-like domains protein 8 ::::Mus musculus (taxid: 10090) confident no hit no match PF07645::EGF_CA 98.62::35-69 GO:0005615::extracellular space confident hh_2bou_A_1::12-71 very confident psy6349 145 O35516::Neurogenic locus notch homolog protein 2 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). May play an essential role in postimplantation development, probably in some aspect of cell specification and/or differentiation. In collaboration with RELA/p65 enhances NFATc1 promoter activity and positively regulates RANKL-induced osteoclast differentiation.::Mus musculus (taxid: 10090) confident no hit no match PF07645::EGF_CA 98.02::6-38 GO:0009986::cell surface confident hh_2vj3_A_1::4-116,118-120 very confident psy9687 141 P10040::Protein crumbs ::Plays a central role in cell polarity establishment. Participates in the assembly, positioning and maintenance of adherens junctions via its interaction with the SAC complex. Controls the coalescence of the spots of zonula adherens (ZA) into a adhesive ring around the cells. It may act as a signal. Involved in morphogenesis of the photoreceptor rhabdomere, for positioning and growth of rhabdomere and AJ during the crucial period of photoreceptor extension along the proximodistal axis of the retina.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07645::EGF_CA 97.91::16-48 GO:0009986::cell surface confident hh_2vj3_A_1::16-44,46-123 very confident psy11800 220 P35556::Fibrillin-2 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 98.61::161-199 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_1uzk_A_1::50-59,62-115,122-125,134-202 very confident psy11059 429 Q07008::Neurogenic locus notch homolog protein 1 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. May be important for follicular differentiation and possibly cell fate selection within the follicle. During cerebellar development, may function as a receptor for neuronal DNER and may be involved in the differentiation of Bergmann glia. Represses neuronal and myogenic differentiation. May enhance HIF1A function by sequestering HIF1AN away from HIF1A (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07645::EGF_CA 98.29::8-42 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2vj3_A_2::290-306,311-312,314-331,346-429 very confident psy11799 483 P35556::Fibrillin-2 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 98.36::422-466 GO:0016043::cellular component organization confident hh_1uzk_A_1::190-196,198-263,267-268,270-272,276-279,289-324,334-361 very confident psy2856 136 A2AJ76::Hemicentin-2 ::::Mus musculus (taxid: 10090) portable no hit no match PF07645::EGF_CA 98.70::19-52 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_1lmj_A_1::19-31,33-69,72-74,76-100 very confident psy13159 660 P13508::Protein glp-1 ::Involved in the specification of the cell fates of the blastomeres, ABa and APa. Proper signaling by glp-1 induces ABa descendants to produce anterior pharyngeal cells, and APa descendants to adopt a different fate. Contributes to the establishment the dorsal-ventral axis in early embryos.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07645::EGF_CA 98.10::37-70 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2bou_A_1::457-470,474-489,500-541,544-558,571-601 very confident psy13158 289 P34576::Transmembrane cell adhesion receptor mua-3 ::Involved in cell adhesion.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07645::EGF_CA 98.46::11-43 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_4d90_A_2::116-144,148-154,158-199,202-202,207-216,231-257 confident psy13144 1031 P34576::Transmembrane cell adhesion receptor mua-3 ::Involved in cell adhesion.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07645::EGF_CA 97.59::38-71 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_3k6s_B_1::733-743,748-759,763-827,834-844,851-856,860-868,874-885,890-901,905-908,922-925,927-937,946-963 very confident psy13157 1434 Q07008::Neurogenic locus notch homolog protein 1 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs. May be important for follicular differentiation and possibly cell fate selection within the follicle. During cerebellar development, may function as a receptor for neuronal DNER and may be involved in the differentiation of Bergmann glia. Represses neuronal and myogenic differentiation. May enhance HIF1A function by sequestering HIF1AN away from HIF1A (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07645::EGF_CA 97.80::1208-1240 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2bou_A_1::573-586,590-607,622-655,658-664,678-719,722-733 very confident psy9419 739 Q8K4G1::Latent-transforming growth factor beta-binding protein 4 ::May be involved in the assembly, secretion and targeting of TGFB1 to sites at which it is stored and/or activated. May play critical roles in controlling and directing the activity of TGFB1. May have a structural role in the extra cellular matrix (ECM).::Mus musculus (taxid: 10090) portable no hit no match PF07645::EGF_CA 98.24::67-102 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2vj3_A_2::185-222,227-228,245-251,253-284,298-298,314-357 very confident psy13148 243 Q91ZI0::Cadherin EGF LAG seven-pass G-type receptor 3 ::Receptor that may have an important role in cell/cell signaling during nervous system formation.::Mus musculus (taxid: 10090) portable no hit no match PF07645::EGF_CA 97.93::44-77 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_3k6s_B_1::2-7,12-24,28-34,39-61,66-77,80-83,87-95,107-119,124-134,138-142,152-184,186-189,192-201 very confident psy590 257 Q923X1::EGF, latrophilin seven transmembrane domain-containing protein 1 ::Could be involved in cardiac development.::Mus musculus (taxid: 10090) portable no hit no match PF07645::EGF_CA 98.22::169-201 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2bou_A_2::18-29,33-94,109-136 confident psy13160 186 Q923X1::EGF, latrophilin seven transmembrane domain-containing protein 1 ::Could be involved in cardiac development.::Mus musculus (taxid: 10090) portable no hit no match PF07645::EGF_CA 98.33::156-186 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2vj3_A_2::70-103,108-134,136-146,152-186 very confident psy15668 365 Q9JI71::Delta-like protein 4 ::Plays a role in the Notch signaling pathway. Activates Notch-1 and Notch-4.::Mus musculus (taxid: 10090) portable no hit no match PF07645::EGF_CA 98.38::6-39 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_3k6s_B_1::74-81,86-98,102-126,131-141,149-153,168-184,189-203,215-226,232-243,248-259,263-266 very confident psy9424 535 Q9NR61::Delta-like protein 4 ::Plays a role in the Notch signaling pathway. Activates Notch-1 and Notch-4.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 97.71::32-64 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2vj3_A_1::142-178,222-228,245-272,276-316,320-327 very confident psy13146 895 Q9R172::Neurogenic locus notch homolog protein 3 ::Functions as a receptor for membrane-bound ligands Jagged1, Jagged2 and Delta1 to regulate cell-fate determination. Upon ligand activation through the released notch intracellular domain (NICD) it forms a transcriptional activator complex with RBPJ/RBPSUH and activates genes of the enhancer of split locus. Affects the implementation of differentiation, proliferation and apoptotic programs (By similarity). Acts instructively to control the cell fate determination of CNS multipotent progenitor cells, resulting in astroglial induction and neuron/oligodendrocyte suppression.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07645::EGF_CA 97.94::126-159 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2bou_A_1::77-90,94-108,117-159,162-176,189-218 very confident psy13147 180 no hit no match no hit no match PF07645::EGF_CA 98.32::13-47 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2bou_A_1::19-30,34-34,36-39,41-53,73-112,119-119,121-153 confident psy5752 222 Q8WWQ8::Stabilin-2 ::Phosphatidylserine receptor that enhances the engulfment of apoptotic cells. Hyaluronan receptor that binds to and mediates endocytosis of hyaluronic acid (HA). Acts also, in different species, as a primary systemic scavenger receptor for heparin (Hep), chondroitin sulfate (CS), dermatan sulfate (DS), nonglycosaminoglycan (GAG), acetylated low-density lipoprotein (AcLDL), pro-collagen propeptides and advanced glycation end products (AGE). May serve to maintain tissue integrity by supporting extracellular matrix turnover or it may contribute to maintaining fluidity of bodily liquids by resorption of hyaluronan. Counter receptor which plays an important role in lymphocyte recruitment in the hepatic vasculature. Binds to both Gram-positive and Gram-negative bacteria and may play a role in defense against bacterial infection. The proteolytically processed 190 kDa form also functions as an endocytosis receptor for heparin internalisation as well as HA and CS.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 98.63::124-158 GO:0043229::intracellular organelle confident hh_1yo8_A_2::58-61,63-72,75-93,121-146,148-192 very confident psy9822 380 P60882::Multiple epidermal growth factor-like domains protein 8 ::::Mus musculus (taxid: 10090) portable no hit no match PF07645::EGF_CA 97.90::184-220 GO:0043256::laminin complex confident hh_2y38_A_1::259-277,279-310,313-336,346-379 very confident psy11797 249 P35556::Fibrillin-2 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-2-containing microfibrils regulate the early process of elastic fiber assembly. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 98.68::89-128 GO:0044421::extracellular region part confident hh_2w86_A_2::88-95,98-133,159-176,181-203,210-215,217-249 very confident psy2857 332 P35555::Fibrillin-1 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 98.79::281-318 GO:0048523::negative regulation of cellular process confident hh_2vj3_A_2::139-177,239-277,280-287,290-318 very confident psy7854 153 P35555::Fibrillin-1 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Homo sapiens (taxid: 9606) portable no hit no match PF07645::EGF_CA 98.84::117-149 GO:0050896::response to stimulus confident hh_1lmj_A_1::74-151 very confident psy11798 245 Q9TV36::Fibrillin-1 ::Fibrillins are structural components of 10-12 nm extracellular calcium-binding microfibrils, which occur either in association with elastin or in elastin-free bundles. Fibrillin-1-containing microfibrils provide long-term force bearing structural support. Regulates osteoblast maturation by controlling TGF-beta bioavailability and calibrating TGF-beta and BMP levels, respectively.::Sus scrofa (taxid: 9823) portable no hit no match PF07645::EGF_CA 98.77::19-58 GO:0051223::regulation of protein transport confident hh_1uzk_A_1::18-29,31-105,108-110,113-137 very confident psy9688 181 P10040::Protein crumbs ::Plays a central role in cell polarity establishment. Participates in the assembly, positioning and maintenance of adherens junctions via its interaction with the SAC complex. Controls the coalescence of the spots of zonula adherens (ZA) into a adhesive ring around the cells. It may act as a signal. Involved in morphogenesis of the photoreceptor rhabdomere, for positioning and growth of rhabdomere and AJ during the crucial period of photoreceptor extension along the proximodistal axis of the retina.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07645::EGF_CA 98.28::148-181 GO:0070887::cellular response to chemical stimulus confident hh_2vj3_A_1::40-92,122-125,127-146,148-154,156-170,173-181 very confident psy11294 111 A2ASQ1::Agrin ::Plays a central role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Ligand of the MUSK signaling complex that directly binds LRP4 in this complex and induces the phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane.::Mus musculus (taxid: 10090) portable no hit no match PF07648::Kazal_2 99.28::69-100 GO:0005604::basement membrane confident hh_2arp_F_2::27-47,49-63,67-102 very confident psy11293 111 A2ASQ1::Agrin ::Plays a central role in the formation and the maintenance of the neuromuscular junction (NMJ), the synapse between motor neuron and skeletal muscle. Ligand of the MUSK signaling complex that directly binds LRP4 in this complex and induces the phosphorylation of MUSK, the kinase of the complex. The activation of MUSK in myotubes induces the formation of NMJ by regulating different processes including the transcription of specific genes and the clustering of AChR in the postsynaptic membrane.::Mus musculus (taxid: 10090) portable no hit no match PF07648::Kazal_2 99.44::69-104 GO:0005604::basement membrane confident hh_3b4v_C_1::12-45,48-63,67-109 very confident psy1764 498 Q90844::Follistatin ::Binds directly to activin and functions as an activin antagonist. Inhibits activin A signaling in the iris and regulates somatostatin phenotype in ciliary ganglion neurons. Specific inhibitor of the biosynthesis and secretion of pituitary follicle stimulating hormone (FSH).::Gallus gallus (taxid: 9031) portable no hit no match PF07648::Kazal_2 99.02::366-403 GO:0044707::single-multicellular organism process confident hh_3b4v_C_1::1-24,26-47,49-88,91-132,134-208 very confident psy9626 145 Q02328::Huntington interacting protein related 1 ::::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07651::ANTH 99.96::3-144 GO:0005856::cytoskeleton confident hh_3zym_A_1::3-24,26-59,61-102,116-144 confident psy9623 355 Q02328::Huntington interacting protein related 1 ::::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07651::ANTH 100.00::53-229 GO:0030479::actin cortical patch confident hh_1hx8_A_1::53-78,85-85,88-90,95-131,133-202,205-220,223-229 very confident psy16398 537 O55012::Phosphatidylinositol-binding clathrin assembly protein ::Assembly protein recruiting clathrin and adaptor protein complex 2 (AP2) to cell membranes at sites of coated-pit formation and clathrin-vesicle assembly. May be required to determine the amount of membrane to be recycled, possibly by regulating the size of the clathrin cage. Involved in AP2-dependent clathrin-mediated endocytosis at the neuromuscular junction.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07651::ANTH 100.00::20-285 GO:0032050::clathrin heavy chain binding confident hh_3zym_A_1::1-152,154-286 very confident psy14876 121 Q9QXX0::Protein jagged-1 ::Ligand for multiple Notch receptors and involved in the mediation of Notch signaling. May be involved in cell-fate decisions during hematopoiesis. Seems to be involved in early and late stages of mammalian cardiovascular development. Inhibits myoblast differentiation (By similarity). May regulate fibroblast growth factor-induced angiogenesis.::Mus musculus (taxid: 10090) confident no hit no match PF07657::MNNL 100.00::5-84 GO:0007423::sensory organ development confident no hit no match psy11549 261 G5EBF1::Protein sax-3 ::Required to confine migrating sex myoblasts to the ventral muscle quadrants during their migration through the body and for multiple aspects of sensory, motor, and interneuron axon guidance.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07679::I-set 99.50::60-150 GO:0000794::condensed nuclear chromosome confident hh_2jll_A_1::2-46,48-67,69-89,91-145,148-217,220-250 very confident psy7036 254 Q3UQ28::Peroxidasin homolog ::Displays low peroxidase activity and is likely to participate in H(2)O(2) metabolism and peroxidative reactions in the cardiovascular system (By similarity). Plays a role in extracellular matrix formation.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.78::9-103 GO:0000794::condensed nuclear chromosome confident hh_2rik_A_1::7-62,68-104,111-167,172-208,219-235,237-254 very confident psy16859 168 Q5VST9::Obscurin ::Involved in myofibrillogenesis. Seems to be involved in assembly of myosin into sarcomeric A bands in striated muscle. Isoform 3 together with ANK1 isoform Mu17/Ank1.5 may provide a molecular link between the sarcoplasmic reticulum and myofibrils.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.78::81-168 GO:0000794::condensed nuclear chromosome confident hh_2j8h_A_1::1-71,77-86,88-167 very confident psy16852 579 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.71::7-96 GO:0000794::condensed nuclear chromosome confident hh_2yd9_A_2::104-149,151-203,208-289,390-402,406-455,495-505,508-533 very confident psy2166 805 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.68::692-784 GO:0000794::condensed nuclear chromosome confident hh_3kld_A_1::64-73,75-91,94-122,125-163,205-228,230-257,260-329,332-352,355-357,360-398,495-506,508-521,524-548,551-552,555-590 very confident psy2145 808 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.67::636-728 GO:0000794::condensed nuclear chromosome confident hh_2rik_A_1::314-339,342-411,505-528,531-602,639-642,644-660,663-729 very confident psy16902 90 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.76::3-82 GO:0000794::condensed nuclear chromosome very confident hh_1u2h_A_1::3-15,18-84 very confident psy2148 1884 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.53::917-1008 GO:0000794::condensed nuclear chromosome confident hh_3kld_A_2::915-941,944-972,975-1014,1057-1079,1081-1110,1113-1151,1260-1291,1294-1310,1325-1326,1334-1379,1428-1433,1435-1450,1453-1475,1478-1481,1484-1518 very confident psy14060 283 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.68::134-223 GO:0000794::condensed nuclear chromosome confident hh_2rik_A_1::49-225,236-280 very confident psy2158 98 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 98.66::6-44 GO:0000794::condensed nuclear chromosome confident hh_2nzi_A_1::7-55,57-84 confident psy2146 3654 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.41::80-171 GO:0000794::condensed nuclear chromosome confident hh_3kld_A_1::76-130,133-135,138-173,289-339,342-386,413-460,463-464,466-466,469-508,523-572,574-574,577-578,581-616 very confident psy16863 1075 no hit no match no hit no match PF07679::I-set 99.60::749-839 GO:0004683::calmodulin-dependent protein kinase activity confident hh_2rik_A_1::348-444,450-529,550-580,582-604,606-636,638-643 very confident psy2441 212 P16621::Tyrosine-protein phosphatase Lar ::Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase). It controls motor axon guidance.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.72::113-205 GO:0005509::calcium ion binding confident hh_2yd1_A_1::27-73,75-156,158-163,165-166,170-208 very confident psy7039 516 Q23551::Twitchin ::Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07679::I-set 99.34::114-228 GO:0005509::calcium ion binding confident hh_3lpw_A_2::317-323,325-354,387-394,399-420,422-453,455-496 very confident psy12421 168 Q23551::Twitchin ::Regulator of muscle contraction and relaxation. Senses mechanical strain that occurs during muscle activity by unfolding in clearly resolvable steps at differing forces.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07679::I-set 99.76::58-146 GO:0005509::calcium ion binding confident hh_2yd9_A_2::55-104,108-119,122-152 very confident psy15206 232 Q24372::Lachesin ::Required for normal tracheal development and maintenance of the trans-epithelial diffusion barrier. Functions as a homophilic cell-adhesion molecule. May play a role in early neuronal differentiation and axon outgrowth.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.43::80-160 GO:0005509::calcium ion binding confident hh_2yd9_A_1::9-18,20-78,80-218,221-231 very confident psy10918 207 Q96RW7::Hemicentin-1 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.58::8-95 GO:0005509::calcium ion binding confident hh_2jll_A_1::12-35,37-86,88-103,105-129,131-186,189-205 very confident psy14540 291 Q9VS29::Down syndrome cell adhesion molecule-like protein Dscam2 ::Cell adhesion molecule.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.69::3-96 GO:0005509::calcium ion binding confident hh_2rik_A_1::1-51,57-101,108-130,132-158,199-263,265-284 very confident psy6536 67 P98160::Basement membrane-specific heparan sulfate proteoglycan core protein ::The LG3 peptide has anti-angiogenic properties that require binding of calcium ions for full activity.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.48::5-67 GO:0005578::proteinaceous extracellular matrix confident hh_3k0w_A_1::4-12,14-47 very confident psy7941 238 Q62718::Neurotrimin ::Neural cell adhesion molecule.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.55::9-122 GO:0005604::basement membrane confident hh_1rhf_A_1::8-34,61-79,89-142,145-174,176-183,194-205,208-234 very confident psy14896 813 Q9VN14::Contactin ::Required for organization of septate junctions and paracellular barrier functions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.51::681-758 GO:0005737::cytoplasm confident hh_2yd9_A_1::480-509,521-536,538-556,558-592,594-669,678-731,734-767 very confident psy15235 323 no hit no match no hit no match PF07679::I-set 99.58::211-304 GO:0005856::cytoskeleton confident hh_2yd9_A_1::25-63,68-135,139-156,158-185,187-194,196-251,253-254,263-273,276-291,296-313 very confident psy1595 147 Q9BMN8::Tyrosine-protein phosphatase Lar-like ::Has a role in early neural and epidermal development; neuroblast movements during closure of the gastrulation cleft and epidermal morphogenesis. Vab-1 and ptp-3 may function redundantly within the same sets of neuronal precursors.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07679::I-set 99.58::64-146 GO:0005912::adherens junction confident hh_2v5t_A_1::13-24,26-37,39-59,62-87,89-138,140-146 very confident psy5866 98 no hit no match no hit no match PF07679::I-set 98.58::6-54 GO:0005913::cell-cell adherens junction confident hh_3o4o_C_1::16-26,28-97 very confident psy2442 111 P16621::Tyrosine-protein phosphatase Lar ::Possible cell adhesion receptor. It possesses an intrinsic protein tyrosine phosphatase activity (PTPase). It controls motor axon guidance.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.71::11-104 GO:0005925::focal adhesion confident hh_2yd9_A_1::7-53,56-95,97-107 very confident psy17207 123 no hit no match no hit no match PF07679::I-set 99.01::2-51 GO:0007156::homophilic cell adhesion confident hh_2r15_A_1::2-84,86-87 very confident psy15736 70 no hit no match no hit no match PF07679::I-set 96.94::38-69 GO:0007156::homophilic cell adhesion confident hh_3tv3_H_1::28-66 confident psy14103 78 no hit no match no hit no match PF07679::I-set 99.39::4-75 GO:0007156::homophilic cell adhesion confident hh_1nct_A_1::4-9,12-24,32-76 very confident psy15979 152 no hit no match no hit no match PF07679::I-set 98.96::2-51 GO:0007156::homophilic cell adhesion confident hh_2a38_A_1::8-83,85-88,90-113,116-125 very confident psy9150 97 Q90W79::Contactin-5 ::Contactins mediate cell surface interactions during nervous system development. May contribute to the formation of somatotopic maps of cerebellar afferents during the development of the nervous system.::Gallus gallus (taxid: 9031) portable no hit no match PF07679::I-set 99.78::3-92 GO:0007275::multicellular organismal development confident hh_2yd9_A_1::4-42,44-48,52-93 very confident psy531 80 Q967D7::Protein turtle ::Essential protein that plays a role in the establishment of coordinated motor control.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 96.95::38-77 GO:0008039::synaptic target recognition confident hh_3o4o_C_1::37-66,68-77 confident psy534 145 Q9UPX0::Protein turtle homolog B ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 98.88::8-80 GO:0008039::synaptic target recognition confident hh_1e07_A_2::10-22,24-37,39-39,42-49,55-129 very confident psy12422 356 A2ASS6::Titin ::Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.74::190-278 GO:0008307::structural constituent of muscle confident hh_2yd9_A_1::1-82,187-240,242-302,305-336 very confident psy670 540 Q18066::Disorganized muscle protein 1 ::Stabilizes the attachment of the myofilament lattice to the muscle cell membrane. Isoform b is sufficient for wild-type function.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07679::I-set 99.52::312-405 GO:0008307::structural constituent of muscle confident hh_2yd9_A_1::111-146,148-157,161-259,261-263,268-305,310-359,365-366,370-378,381-412 very confident psy12428 60 Q6PDN3::Myosin light chain kinase, smooth muscle ::Calcium/calmodulin-dependent myosin light chain kinase implicated in smooth muscle contraction via phosphorylation of myosin light chains (MLC). Also regulates actin-myosin interaction through a non-kinase activty. Phosphorylates PTK2B/PYK2 and myosin light-chains. Involved in the inflammatory response (e.g. apoptosis, vascular permeability, leukocyte diapedesis), cell motility and morphology, airway hyperreactivity and other activities relevant to asthma. Required for tonic airway smooth muscle contraction that is necessary for physiological and asthmatic airway resistance. Necessary for gastrointestinal motility. Implicated in the regulation of endothelial as well as vascular permeability, probably via the regulation of cytoskeletal rearrangements. In the nervous system it has been shown to control the growth initiation of astrocytic processes in culture and to participate in transmitter release at synapses formed between cultured sympathetic ganglion cells. Critical participant in signaling sequences that result in fibroblast apoptosis. Plays a role in the regulation of epithelial cell survival. Required for epithelial wound healing, especially during actomyosin ring contraction during purse-string wound closure. Mediates RhoA-dependent membrane blebbing. Triggers TRPC5 channel activity in a calcium-dependent signaling, by inducing its subcellular localization at the plasma membrane. Promotes cell migration (including tumor cells) and tumor metastasis. PTK2B/PYK2 activation by phosphorylation mediates ITGB2 activation and is thus essential to trigger neutrophil transmigration during acute lung injury (ALI). May regulate optic nerve head astrocyte migration. Probably involved in mitotic cytoskeletal regulation. Regulates tight junction probably by modulating ZO-1 exchange in the perijunctional actomyosin ring. Mediates burn-induced microvascular barrier injury; triggers endothelial contraction in the development of microvascular hyperpermeability by phosphorylating MLC. Essential for intestinal barrier dysfunction. Mediates Giardia spp.-mediated reduced epithelial barrier function during giardiasis intestinal infection via reorganization of cytoskeletal F-actin and tight junctional ZO-1. Necessary for hypotonicity-induced Ca(2+) entry and subsequent activation of volume-sensitive organic osmolyte/anion channels (VSOAC) in cervical cancer cells.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.47::2-59 GO:0008307::structural constituent of muscle confident hh_2yr3_A_1::2-17,21-60 very confident psy7044 68 no hit no match no hit no match PF07679::I-set 99.73::2-60 GO:0008307::structural constituent of muscle confident hh_3irg_B_1::2-64 very confident psy14532 258 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.68::3-110 GO:0009605::response to external stimulus confident hh_2yd9_A_1::1-46,51-55,70-81,83-102,104-174,176-228,230-250 very confident psy15738 187 no hit no match no hit no match PF07679::I-set 99.59::105-184 GO:0009605::response to external stimulus confident no hit no match psy8666 124 Q7TPD3::Roundabout homolog 2 ::Receptor for SLIT2, and probably SLIT1, which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development.::Mus musculus (taxid: 10090) confident no hit no match PF07679::I-set 99.55::2-88 GO:0009790::embryo development confident hh_2vr9_A_1::2-36,39-90 very confident psy11826 83 no hit no match no hit no match PF07679::I-set 99.76::2-82 GO:0016043::cellular component organization confident hh_2yd9_A_1::2-36,46-56,59-82 very confident psy18191 238 Q7TPD3::Roundabout homolog 2 ::Receptor for SLIT2, and probably SLIT1, which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development.::Mus musculus (taxid: 10090) confident no hit no match PF07679::I-set 99.67::132-225 GO:0016477::cell migration confident hh_2v9t_A_1::128-229 very confident psy11131 150 Q8IVU1::Immunoglobulin superfamily DCC subclass member 3 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.54::56-139 GO:0016477::cell migration confident hh_2rik_A_1::17-81,85-128,130-140 very confident psy16426 194 P13591::Neural cell adhesion molecule 1 ::This protein is a cell adhesion molecule involved in neuron-neuron adhesion, neurite fasciculation, outgrowth of neurites, etc.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.55::56-150 GO:0030017::sarcomere confident hh_2j8h_A_1::8-91,93-110,115-151 very confident psy15667 286 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.65::3-91 GO:0030017::sarcomere confident hh_2yd9_A_1::1-46,48-53,56-59,61-162,201-218,220-242,248-258,261-286 very confident psy2775 785 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.67::559-649 GO:0030017::sarcomere confident hh_2yd9_A_2::325-370,372-466,470-508,558-605,610-621,625-651 very confident psy2776 803 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.61::673-763 GO:0030017::sarcomere confident hh_2wim_A_1::313-334,336-358,421-452,494-508,515-558,562-600,672-723,726-735,737-765 very confident psy6361 148 Q96RW7::Hemicentin-1 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.50::5-85 GO:0030154::cell differentiation confident hh_2rik_A_1::8-28,37-94,96-137 very confident psy15390 142 Q96RW7::Hemicentin-1 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.70::9-141 GO:0030154::cell differentiation confident hh_3kld_A_1::17-56,59-60,62-131,133-142 very confident psy5280 202 no hit no match no hit no match PF07679::I-set 99.76::104-195 GO:0031430::M band confident hh_2kkq_A_1::98-113,115-198 very confident psy9145 111 P97528::Contactin-6 ::Contactins mediate cell surface interactions during nervous system development. Participates in oligodendrocytes generation by acting as a ligand of NOTCH1. Its association with NOTCH1 promotes NOTCH1 activation through the released notch intracellular domain (NICD) and subsequent translocation to the nucleus. May be involved in motor coordination.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.67::22-106 GO:0031594::neuromuscular junction confident hh_1f97_A_1::22-67,70-106 very confident psy573 216 O89026::Roundabout homolog 1 ::Receptor for SLIT1 and SLIT2 which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development. In axon growth cones, the silencing of the attractive effect of NTN1 by SLIT2 may require the formation of a ROBO1-DCC complex (By similarity). May be required for lung development.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.64::119-204 GO:0031672::A band confident no hit no match psy14542 371 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.59::222-308 GO:0031672::A band confident hh_2yd9_A_1::8-19,21-35,37-125,127-143,165-185,187-197,199-206,210-216,219-232,234-281,284-313 very confident psy4613 96 P97686::Neuronal cell adhesion molecule ::Cell adhesion, ankyrin-binding protein involved in neuron-neuron adhesion. May play a role in the molecular assembly of the nodes of Ranvier.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.77::2-95 GO:0042221::response to chemical stimulus confident hh_3lcy_A_1::1-43,45-55,61-94 very confident psy16652 384 Q24372::Lachesin ::Required for normal tracheal development and maintenance of the trans-epithelial diffusion barrier. Functions as a homophilic cell-adhesion molecule. May play a role in early neuronal differentiation and axon outgrowth.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.66::274-368 GO:0042803::protein homodimerization activity confident hh_3kld_A_1::2-58,64-114,129-137,142-261,263-322,332-370 very confident psy8823 386 Q24372::Lachesin ::Required for normal tracheal development and maintenance of the trans-epithelial diffusion barrier. Functions as a homophilic cell-adhesion molecule. May play a role in early neuronal differentiation and axon outgrowth.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF07679::I-set 99.62::226-322 GO:0042803::protein homodimerization activity very confident hh_2rik_A_1::22-67,82-89,92-120,122-212,214-265,268-279,285-323 very confident psy12725 119 G5EBF1::Protein sax-3 ::Required to confine migrating sex myoblasts to the ventral muscle quadrants during their migration through the body and for multiple aspects of sensory, motor, and interneuron axon guidance.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07679::I-set 99.58::1-67 GO:0043025::neuronal cell body confident hh_3dmk_A_1::1-30,32-117 very confident psy12724 167 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.52::68-152 GO:0043025::neuronal cell body confident rp_3dmk_A_1::62-105,107-117,119-167 very confident psy11558 74 Q96JA1::Leucine-rich repeats and immunoglobulin-like domains protein 1 ::Act as a feedback negative regulator of signaling by receptor tyrosine kinases, through a mechanism that involves enhancement of receptor ubiquitination and accelerated intracellular degradation.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.00::19-68 GO:0043025::neuronal cell body confident hh_2v5m_A_1::17-68 very confident psy14473 94 no hit no match no hit no match PF07679::I-set 99.36::4-71 GO:0043025::neuronal cell body confident bp_3dmk_A_1::19-72 very confident psy11557 61 no hit no match no hit no match PF07679::I-set 99.07::11-55 GO:0043025::neuronal cell body confident hh_2v5m_A_1::9-59 very confident psy16425 163 Q98892::Opioid-binding protein/cell adhesion molecule homolog ::Inhibits neurite outgrowth.::Gallus gallus (taxid: 9031) portable no hit no match PF07679::I-set 99.30::3-75 GO:0043229::intracellular organelle confident no hit no match psy3045 267 Q96RW7::Hemicentin-1 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.47::14-102 GO:0043234::protein complex confident hh_2v5m_A_2::23-112,142-177,179-215 very confident psy16261 158 P97686::Neuronal cell adhesion molecule ::Cell adhesion, ankyrin-binding protein involved in neuron-neuron adhesion. May play a role in the molecular assembly of the nodes of Ranvier.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.71::2-95 GO:0044464::cell part confident hh_2j8h_A_1::2-36,38-55,60-97 very confident psy17146 1011 Q08180::Irregular chiasm C-roughest protein ::Required for correct axonal pathway formation in the optic lobe and for programmed cell death in the developing retina.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07679::I-set 99.41::630-725 GO:0044464::cell part confident hh_1e07_A_2::36-69,76-84,89-115,119-139,141-156,158-177,195-251,319-331,334-362,364-431,434-500,502-502,504-585,588-612,614-627 very confident psy3823 365 Q0PMG2::MAM domain-containing glycosylphosphatidylinositol anchor protein 1 ::Required for radial migration of cortical neurons in the superficial layer of the neocortex.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.45::225-316 GO:0044464::cell part confident hh_1e07_A_1::4-42,44-53,55-58,70-106,109-109,114-121,124-124,128-146,148-151,153-211,222-255,257-268,281-319 very confident psy5694 129 Q4VA61::Down syndrome cell adhesion molecule-like protein 1 homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Promotes both isoneuronal self-avoidance for creating an orderly neurite arborization in retinal rod bipolar cells and heteroneuronal self-avoidance to maintain mosaic spacing between AII amacrine cells.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.43::20-109 GO:0044464::cell part confident hh_2v5m_A_1::14-28,30-92,94-122 very confident psy5692 98 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 96.82::18-90 GO:0044464::cell part confident hh_3dmk_A_1::2-16,18-79 very confident psy9140 114 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.64::8-105 GO:0044464::cell part confident hh_2v5m_A_1::6-108 very confident psy5697 145 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.59::47-136 GO:0044464::cell part confident hh_2v5m_A_1::45-138 very confident psy10361 236 Q96J84::Kin of IRRE-like protein 1 ::Plays a significant role in the normal development and function of the glomerular permeability. Signaling protein that needs the presence of TEC kinases to fully trans-activate the transcription factor AP-1.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.44::146-227 GO:0044464::cell part confident hh_1bih_A_1::90-124,138-167,170-184,189-193,196-198,204-227 very confident psy15734 314 Q98892::Opioid-binding protein/cell adhesion molecule homolog ::Inhibits neurite outgrowth.::Gallus gallus (taxid: 9031) portable no hit no match PF07679::I-set 99.68::176-270 GO:0044464::cell part confident hh_3b43_A_1::18-61,63-63,72-83,85-129,132-161,163-213,215-230,235-306 very confident psy17058 471 Q9NR99::Matrix-remodeling-associated protein 5 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.43::276-362 GO:0044464::cell part confident hh_2yd9_A_1::89-127,129-165,167-187,189-205,207-230,232-281,283-320,323-335,338-367 very confident psy4606 69 Q62813::Limbic system-associated membrane protein ::Mediates selective neuronal growth and axon targeting. Contributes to the guidance of developing axons and remodeling of mature circuits in the limbic system. Essential for normal growth of the hyppocampal mossy fiber projection.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07679::I-set 99.15::10-58 GO:0044699::single-organism process confident hh_2rik_A_1::2-15,18-47,49-58 very confident psy14080 113 no hit no match no hit no match PF07679::I-set 99.72::9-106 GO:0044699::single-organism process confident hh_2c5d_C_1::11-43,46-53,59-108 very confident psy3475 207 P98160::Basement membrane-specific heparan sulfate proteoglycan core protein ::The LG3 peptide has anti-angiogenic properties that require binding of calcium ions for full activity.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.44::74-157 GO:0044707::single-multicellular organism process confident hh_2jll_A_1::1-15,18-30,33-102,105-128,131-159 very confident psy3125 163 no hit no match no hit no match PF07679::I-set 99.42::1-80 GO:0044707::single-multicellular organism process confident hh_2wim_A_1::1-18,20-24,31-40,46-162 very confident psy1826 169 Q5R412::Neuronal growth regulator 1 ::May be involved in cell-adhesion. May function as a trans-neural growth-promoting factor in regenerative axon sprouting in the mammalian brain.::Pongo abelii (taxid: 9601) portable no hit no match PF07679::I-set 98.58::78-162 GO:0044763::single-organism cellular process confident hh_2jll_A_1::4-20,23-35,38-105,108-124 very confident psy11568 116 Q8VHZ8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38 (By similarity). Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.17::1-65 GO:0044763::single-organism cellular process confident hh_2v5m_A_2::1-6,8-69,80-86,88-115 very confident psy16421 151 Q9Y6N7::Roundabout homolog 1 ::Receptor for SLIT1 and SLIT2 which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development. In axon growth cones, the silencing of the attractive effect of NTN1 by SLIT2 may require the formation of a ROBO1-DCC complex. May be required for lung development.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 98.64::102-144 GO:0044763::single-organism cellular process confident hh_2yd1_A_1::47-55,58-86,88-144 very confident psy7035 70 no hit no match no hit no match PF07679::I-set 99.13::2-56 GO:0046331::lateral inhibition confident hh_1e07_A_2::2-62 very confident psy7616 147 Q96RW7::Hemicentin-1 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.50::9-95 GO:0048523::negative regulation of cellular process confident hh_3k0w_A_1::8-16,19-54,59-146 very confident psy12132 126 Q63638::Striated muscle-specific serine/threonine-protein kinase ::Isoform 2 may have a role in regulating the growth and differentiation of arterial smooth muscle cells.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.80::2-83 GO:0048699::generation of neurons confident hh_2jll_A_1::4-92,94-124 very confident psy2149 108 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07679::I-set 99.53::40-105 GO:0048699::generation of neurons confident hh_2k1m_A_1::42-90,95-107 very confident psy11132 243 Q9ERC8::Down syndrome cell adhesion molecule homolog ::Cell adhesion molecule that plays a role in neuronal self-avoidance. Promotes repulsion between specific neuronal processes of either the same cell or the same subtype of cells. Mediates within retinal amacrine and ganglion cell subtypes both isoneuronal self-avoidance for creating an orderly dendritic arborization and heteroneuronal self-avoidance to maintain the mosaic spacing between amacrine and ganglion cell bodies. Receptor for netrin required for axon guidance independently of and in collaboration with the receptor DCC. In spinal chord development plays a role in guiding commissural axons projection and pathfinding across the ventral midline to reach the floor plate upon ligand binding. Enhances netrin-induced phosphorylation of PAK1 and FYN. Mediates intracellular signaling by stimulating the activation of MAPK8 and MAP kinase p38.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.71::10-101 GO:0048731::system development confident hh_2rik_A_1::7-34,36-63,65-129,131-157,159-237 very confident psy1095 325 A2ASS6::Titin ::Key component in the assembly and functioning of vertebrate striated muscles. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.71::66-155 GO:0050896::response to stimulus confident hh_2yd9_A_1::63-109,111-193,196-221,228-292,295-324 very confident psy13371 212 Q96J84::Kin of IRRE-like protein 1 ::Plays a significant role in the normal development and function of the glomerular permeability. Signaling protein that needs the presence of TEC kinases to fully trans-activate the transcription factor AP-1.::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.43::89-173 GO:0050896::response to stimulus confident hh_2yd9_A_1::1-22,25-27,36-117,120-136,138-145,151-174 very confident psy3272 115 Q96RW7::Hemicentin-1 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.37::1-60 GO:0050896::response to stimulus confident hh_2yd9_A_1::2-22,26-86,89-114 very confident psy17205 106 Q98892::Opioid-binding protein/cell adhesion molecule homolog ::Inhibits neurite outgrowth.::Gallus gallus (taxid: 9031) portable no hit no match PF07679::I-set 99.82::8-97 GO:0050896::response to stimulus confident hh_1nct_A_1::7-33,35-99 very confident psy15128 292 O89026::Roundabout homolog 1 ::Receptor for SLIT1 and SLIT2 which are thought to act as molecular guidance cue in cellular migration, including axonal navigation at the ventral midline of the neural tube and projection of axons to different regions during neuronal development. In axon growth cones, the silencing of the attractive effect of NTN1 by SLIT2 may require the formation of a ROBO1-DCC complex (By similarity). May be required for lung development.::Mus musculus (taxid: 10090) portable no hit no match PF07679::I-set 99.60::37-128 GO:0051015::actin filament binding confident hh_2yd9_A_1::34-79,83-222,224-244,247-249,253-253,260-267,270-290 very confident psy8425 176 O35569::Pro-neuregulin-2, membrane-bound isoform ::Direct ligand for ERBB3 and ERBB4 tyrosine kinase receptors. Concomitantly recruits ERBB1 and ERBB2 coreceptors, resulting in ligand-stimulated tyrosine phosphorylation and activation of the ERBB receptors. May also promote the heterodimerization with the EGF receptor.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07679::I-set 99.81::11-101 GO:0070887::cellular response to chemical stimulus confident hh_2j8h_A_1::9-94,97-105 very confident psy12131 245 Q8NDA2::Hemicentin-2 ::::Homo sapiens (taxid: 9606) portable no hit no match PF07679::I-set 99.71::50-139 GO:0071944::cell periphery confident hh_2jll_A_1::2-36,38-149,151-181,183-195,204-243 very confident psy5838 215 Q9W6V2::Neuronal growth regulator 1 ::May be involved in cell-adhesion. May participate in the regulation of neurite outgrowth in the developing brain.::Gallus gallus (taxid: 9031) portable no hit no match PF07679::I-set 99.38::18-110 GO:0071944::cell periphery confident hh_2vr9_A_1::14-48,56-61,63-69,76-86,90-93,125-166,169-199,201-206 very confident psy12134 139 no hit no match no hit no match PF07679::I-set 98.91::2-51 GO:0071944::cell periphery confident hh_3u83_A_1::16-41,43-120 very confident psy7729 167 no hit no match no hit no match PF07686::V-set 98.67::17-66 GO:0016324::apical plasma membrane confident no hit no match psy10521 66 no hit no match no hit no match PF07686::V-set 97.43::7-56 GO:0043025::neuronal cell body confident hh_2v5m_A_1::7-60 very confident psy16969 77 P54219::Chromaffin granule amine transporter ::Involved in the vesicular transport of biogenic amines.::Homo sapiens (taxid: 9606) portable no hit no match PF07690::MFS_1 96.33::4-72 GO:0043679::axon terminus confident hh_4aps_A_1::3-34,36-72 portable psy2439 146 Q9VEU6::Soluble guanylate cyclase 89Da ::Heterodimers with Gyc-89Da and Gyc-89Db are activated in response to changing oxygen concentrations, alerting flies to hypoxic environments. Under normal oxygen concentrations, oxygen binds to the heme group and results in low levels of guanylyl cyclase activity. When exposed to reduced oxygen concentrations, the oxygen dissociates from the heme group resulting in activation of the enzyme.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07700::HNOB 99.84::1-118 GO:0006184::GTP catabolic process confident hh_3tfg_A_1::1-42,44-47,49-70,84-117 very confident psy9750 90 P32870::Ca(2+)/calmodulin-responsive adenylate cyclase ::This is a membrane-bound, calmodulin-sensitive adenylyl cyclase. Inactivation of this cyclase leads to a learning and memory defect.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07701::HNOBA 97.14::14-66 GO:0007528::neuromuscular junction development confident hh_3hls_A_1::34-68 portable psy7234 164 Q07093::Head-specific guanylate cyclase ::May have a role in phototransduction. A second subunit may be required for enzyme activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07701::HNOBA 100.00::9-163 GO:0043234::protein complex confident hh_2p08_A_1::14-49,52-67,69-90,100-139 very confident psy11551 705 P58545::BTB/POZ domain-containing protein 3 ::::Mus musculus (taxid: 10090) confident no hit no match PF07707::BACK 99.75::557-667 GO:0000932::cytoplasmic mRNA processing body confident hh_2vkp_A_1::235-342 very confident psy12174 195 Q9Y2F9::BTB/POZ domain-containing protein 3 ::::Homo sapiens (taxid: 9606) confident no hit no match PF07707::BACK 99.65::2-87 GO:0022008::neurogenesis confident hh_3no8_A_1::116-134,138-184 very confident psy10024 69 Q64729::TGF-beta receptor type-1 ::Transmembrane serine/threonine kinase forming with the TGF-beta type II serine/threonine kinase receptor, TGFBR2, the non-promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinogenesis. The formation of the receptor complex composed of 2 TGFBR1 and 2 TGFBR2 molecules symmetrically bound to the cytokine dimer results in the phosphorylation and the activation of TGFBR1 by the constitutively active TGFBR2. Activated TGFBR1 phosphorylates SMAD2 which dissociates from the receptor and interacts with SMAD4. The SMAD2-SMAD4 complex is subsequently translocated to the nucleus where it modulates the transcription of the TGF-beta-regulated genes. This constitutes the canonical SMAD-dependent TGF-beta signaling cascade. Also involved in non-canonical, SMAD-independent TGF-beta signaling pathways. For instance, TGFBR1 induces TRAF6 autoubiquitination which in turn results in MAP3K7 ubiquitination and activation to trigger apoptosis. Also regulates epithelial to mesenchymal transition through a SMAD-independent signaling pathway through PARD6A phosphorylation and activation.::Mus musculus (taxid: 10090) confident no hit no match PF07714::Pkinase_Tyr 98.58::7-52 GO:0005025::transforming growth factor beta receptor activity, type I confident hh_1b6c_B_1::5-59 very confident psy12752 182 B1WAR9::Serine/threonine-protein kinase greatwall ::Serine/threonine kinase that plays a key role in M phase by acting as a regulator of mitosis entry and maintenance. Acts by promoting the inactivation of protein phosphatase 2A (PP2A) during M phase: does not directly inhibit PP2A but acts by mediating phosphorylation and subsequent activation of arpp19 and ensa at 'Ser-67', 2 phosphatase inhibitors that specifically inhibit the ppp2r2d (PR55-delta) subunit of PP2A. Inactivation of PP2A during M phase is essential to keep cyclin-B1-CDK1 activity high. Following DNA damage, it is also involved in checkpoint recovery by being inhibited.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF07714::Pkinase_Tyr 99.52::1-116 GO:0005794::Golgi apparatus confident hh_2w4o_A_1::5-99,103-126 very confident psy925 69 P32577::Tyrosine-protein kinase CSK ::Non-receptor tyrosine-protein kinase that plays an important role in the regulation of cell growth, differentiation, migration and immune response. Phosphorylates tyrosine residues located in the C-terminal tails of Src-family kinases (SFKs) including LCK, SRC, HCK, FYN, LYN or YES1. Upon tail phosphorylation, Src-family members engage in intramolecular interactions between the phosphotyrosine tail and the SH2 domain that result in an inactive conformation. To inhibit SFKs, CSK is recruited to the plasma membrane via binding to transmembrane proteins or adapter proteins located near the plasma membrane. Suppresses signaling by various surface receptors, including T-cell receptor (TCR) and B-cell receptor (BCR) by phosphorylating and maintaining inactive several positive effectors such as FYN or LCK.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07714::Pkinase_Tyr 99.45::3-60 GO:0005911::cell-cell junction confident hh_1byg_A_1::3-68 very confident psy10555 86 Q16832::Discoidin domain-containing receptor 2 ::Tyrosine kinase that functions as cell surface receptor for fibrillar collagen and regulates cell differentiation, remodeling of the extracellular matrix, cell migration and cell proliferation. Required for normal bone development. Regulates osteoblast differentiation and chondrocyte maturation via a signaling pathway that involves MAP kinases and leads to the activation of the transcription factor RUNX2. Regulates remodeling of the extracellular matrix by up-regulation of the collagenases MMP1, MMP2 and MMP13, and thereby facilitates cell migration and tumor cell invasion. Promotes fibroblast migration and proliferation, and thereby contributes to cutaneous wound healing.::Homo sapiens (taxid: 9606) portable no hit no match PF07714::Pkinase_Tyr 99.43::1-74 GO:0031090::organelle membrane confident hh_2qol_A_1::1-9,11-31,39-79 very confident psy1684 189 Q9V9J3::Tyrosine-protein kinase Src42A ::Essential for correct eye morphogenesis (ommatidial R7 neuron formation), this requires the Ras1/MAPK signal transduction pathway. May be involved in the regulation of cytoskeleton organization and cell-cell contacts in developing ommatidia.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07714::Pkinase_Tyr 99.79::5-172 GO:0044464::cell part confident hh_1qcf_A_1::1-186 very confident psy360 199 Q54Y55::Dual specificity protein kinase shkC ::Required for proper chemotaxis and phagocytosis; proper spatiotemporal control of F-actin levels in chemotaxing cells. Negative regulator of the PI3K (phosphatidylinositol 3 kinase) pathway. Predominantly phosphorylates serines and threonines and tyrosines at a lower level.::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF07714::Pkinase_Tyr 99.45::110-198 GO:0046777::protein autophosphorylation confident rp_1t4h_A_1::85-199 very confident psy16107 256 Q02637::CCAAT/enhancer-binding protein ::May be required for the expression of gene products mediating border cell migration. Among the DNA sequences that this protein binds with high affinity is a conserved site within the promoter of its gene.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07716::bZIP_2 99.47::170-223 GO:0005634::nucleus confident hh_1hjb_A_1::166-233,237-241 very confident psy12101 105 P26801::CCAAT/enhancer-binding protein gamma ::Transcription factor that binds to the promoter and the enhancer of the alpha-1-fetoprotein gene.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07716::bZIP_2 99.34::2-47 GO:0046982::protein heterodimerization activity confident hh_1hjb_A_1::2-61 very confident psy17940 81 Q5R922::Coatomer subunit beta ::The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. Plays a functional role in facilitating the transport of kappa-type opioid receptor mRNAs into axons and enhances translation of these proteins. Required for limiting lipid storage in lipid droplets. Involved in lipid homeostasis by regulating the presence of perilipin family members PLIN2 and PLIN3 at the lipid droplet surface and promoting the association of adipocyte surface triglyceride lipase (PNPLA2) with the lipid droplet to mediate lipolysis. Involved in the Golgi disassembly and reassembly processes during cell cycle. Involved in autophagy by playing a role in early endosome function. Plays a role in organellar compartmentalization of secretory compartments including endoplasmic reticulum (ER)-Golgi intermediate compartment (ERGIC), Golgi, trans-Golgi network (TGN) and recycling endosomes, and in biosynthetic transport of CAV1. Promotes degradation of Nef cellular targets CD4 and MHC class I antigens by facilitating their trafficking to degradative compartments.::Pongo abelii (taxid: 9601) portable no hit no match PF07718::Coatamer_beta_C 99.00::24-81 GO:0005794::Golgi apparatus confident no hit no match psy13340 121 Q09825::Spindle pole body-associated protein sad1 ::Associates with the spindle pole body and maintains a functional interface between the nuclear membrane and the microtubule motor proteins. Involved in chromosome segregation during meiosis where it associates with the telomeres.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF07738::Sad1_UNC 99.97::1-89 GO:0006998::nuclear envelope organization confident hh_4dxt_A_1::1-90 very confident psy13339 365 Q20745::Nuclear migration and anchoring protein unc-84 ::Involved in nuclear migration and anchoring. Not required for centrosome attachment to the nucleus. Probably anchors the structural protein anc-1 to the nucleus, creating a bridge across the nuclear envelope between the cytoskeleton and the nucleus. Probably involved in nuclear migration via its interaction with unc-83. Recruits both unc-83 and anc-1 to the nuclear envelope. Together these proteins may function to bridge the two membranes of the nuclear envelope, connecting the nuclear matrix to the cytoskeleton.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF07738::Sad1_UNC 100.00::110-241 GO:0034993::SUN-KASH complex confident hh_4dxt_A_1::47-56,60-242 very confident psy11249 105 O88677::Protein BTG3 ::Overexpression impairs serum-induced cell cycle progression from the G0/G1 to S phase.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07742::BTG 100.00::1-105 GO:0008285::negative regulation of cell proliferation confident hh_3e9v_A_1::1-19,21-64,67-105 very confident psy1522 339 Q9JM55::Protein Tob2 ::Anti-proliferative protein inhibits cell cycle progression from the G0/G1 to S phases.::Mus musculus (taxid: 10090) confident no hit no match PF07742::BTG 100.00::2-127 GO:0010468::regulation of gene expression confident hh_2z15_A_1::1-43,68-127 very confident psy1523 190 Q9JM55::Protein Tob2 ::Anti-proliferative protein inhibits cell cycle progression from the G0/G1 to S phases.::Mus musculus (taxid: 10090) portable no hit no match PF07742::BTG 99.28::26-54 GO:0060212::negative regulation of nuclear-transcribed mRNA poly(A) tail shortening confident hh_3e9v_A_1::26-58 confident psy5895 152 Q8SX83::Protein split ends ::Probable corepressor protein, which regulates different key pathways such as the EGF receptor and Wg pathways. Involved in neuronal cell fate, survival and axon guidance, cell cycle regulation and repression of head identity in the embryonic trunk. May act with the Hox gene Deformed and the EGF receptor signaling pathway. Positive regulator of the Wg pathway in larval tissues but not in embryonic tissues. May act as a transcriptional corepressor protein, which repress transcription via the recruitment of large complexes containing histone deacetylase proteins.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07744::SPOC 99.65::1-113 GO:0017053::transcriptional repressor complex confident hh_1ow1_A_1::1-18,20-21,27-146 very confident psy11165 244 Q16706::Alpha-mannosidase 2 ::Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.::Homo sapiens (taxid: 9606) confident no hit no match PF07748::Glyco_hydro_38C 99.17::108-216 GO:0005773::vacuole confident hh_3bvx_A_1::2-125 very confident psy11168 126 P49641::Alpha-mannosidase 2x ::Catalyzes the first committed step in the biosynthesis of complex N-glycans. It controls conversion of high mannose to complex N-glycans; the final hydrolytic step in the N-glycan maturation pathway.::Homo sapiens (taxid: 9606) portable no hit no match PF07748::Glyco_hydro_38C 99.32::1-126 GO:0008152::metabolic process confident hh_3bvx_A_1::1-76,83-126 very confident psy4567 803 P0C5J3::B9 domain-containing protein 2 ::Component of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07773::DUF1619 100.00::383-619 GO:0005932::microtubule basal body confident no hit no match psy8582 161 Q2LZ58::Protein charybde ::Inhibits cell growth by regulating the Tor pathway upstream of the Tsc1-Tsc2 complex and downstream of Akt1. Acts as cell death activator during head development.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF07809::RTP801_C 100.00::38-153 GO:0044763::single-organism cellular process confident hh_3lq9_A_1::23-117,119-156 very confident psy13710 615 Q7TQ69::Transmembrane channel-like protein 3 ::::Mus musculus (taxid: 10090) portable no hit no match PF07810::TMC 94.87::525-557 GO:0044464::cell part confident rp_1vt4_I_1::241-252,254-259,267-302,308-320,332-349,360-389,394-426,439-553,559-585,590-615 portable psy9761 420 Q9NYB9::Abl interactor 2 ::May act in regulation of cell growth and transformation by interacting with nonreceptor tyrosine kinases ABL1 and/or ABL2. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex. Regulates ABL1/c-Abl-mediated phosphorylation of MENA.::Homo sapiens (taxid: 9606) confident no hit no match PF07815::Abi_HHR 99.84::73-155 GO:0005829::cytosol confident hh_3p8c_F_1::1-142 very confident psy10518 381 Q5ZII9::Tuftelin-interacting protein 11 ::May be involved in pre-mRNA splicing.::Gallus gallus (taxid: 9031) portable no hit no match PF07842::GCFC 100.00::82-351 GO:0044428::nuclear part confident rp_1vt4_I_1::95-131,135-136,139-139,142-147,157-179,182-211,215-223,226-266,270-278,281-330,342-367,369-379 portable psy8200 530 Q9VMD6::Protein real-time ::::Drosophila melanogaster (taxid: 7227) portable no hit no match PF07851::TMPIT 100.00::304-480 GO:0005739::mitochondrion confident no hit no match psy1806 244 A4IH75::Autophagy-related protein 101 ::Autophagy factor required for autophagosome formation.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF07855::DUF1649 100.00::8-180 GO:0000407::pre-autophagosomal structure confident hh_4aez_B_1::13-41,59-92,102-114,123-168,172-178,195-206 portable psy15988 718 Q8BH10::Protein orai-2 ::Ca(2+) release-activated Ca(2+)-like (CRAC-like) channel subunit which mediates Ca(2+) influx and increase in Ca(2+)-selective current by synergy with the Ca(2+) sensor, STIM1.::Mus musculus (taxid: 10090) confident no hit no match PF07856::Orai-1 100.00::272-441 GO:0005887::integral to plasma membrane confident hh_4hkr_A_1::272-467 very confident psy5555 185 Q9NPC2::Potassium channel subfamily K member 9 ::pH-dependent, voltage-insensitive, background potassium channel protein.::Homo sapiens (taxid: 9606) portable no hit no match PF07885::Ion_trans_2 99.42::60-118 GO:0005216::ion channel activity confident hh_3ukm_A_1::17-22,25-45,47-181 very confident psy6814 171 O00180::Potassium channel subfamily K member 1 ::Weakly inward rectifying potassium channel.::Homo sapiens (taxid: 9606) confident no hit no match PF07885::Ion_trans_2 99.52::72-150 GO:0005267::potassium channel activity confident hh_3ukm_A_1::32-165 very confident psy9473 161 Q9ER47::Potassium voltage-gated channel subfamily H member 7 ::Pore-forming (alpha) subunit of voltage-gated potassium channel (By similarity). Channel properties may be modulated by cAMP and subunit assembly.::Mus musculus (taxid: 10090) confident no hit no match PF07885::Ion_trans_2 99.65::88-143 GO:0005635::nuclear envelope confident hh_3vou_A_1::89-140 very confident psy15872 96 Q9JL58::Potassium channel subfamily K member 9 ::pH-dependent, voltage-insensitive, background potassium channel protein.::Cavia porcellus (taxid: 10141) confident no hit no match PF07885::Ion_trans_2 99.68::16-78 GO:0005887::integral to plasma membrane confident hh_3ukm_A_1::15-78 very confident psy17959 790 O14649::Potassium channel subfamily K member 3 ::pH-dependent, voltage-insensitive, background potassium channel protein. Rectification direction results from potassium ion concentration on either side of the membrane. Acts as an outward rectifier when external potassium concentration is low. When external potassium concentration is high, current is inward.::Homo sapiens (taxid: 9606) portable no hit no match PF07885::Ion_trans_2 99.47::679-763 GO:0016021::integral to membrane confident no hit no match psy11889 123 G5EFC3::Potassium voltage-gated channel protein egl-36 ::Voltage-dependent potassium channel involved in the excitation of muscles operating egg-laying and defecation.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF07885::Ion_trans_2 99.73::7-65 GO:0030673::axolemma confident hh_2r9r_B_1::4-71 very confident psy6107 161 Q03720::Calcium-activated potassium channel slowpoke ::Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Kinetics are determined by alternative splicing, phosphorylation status and its combination interaction with Slob and 14-3-3-zeta. While the interaction with Slob1 alone increases its activity, its interaction with both Slob1 and 14-3-3-zeta decreases its activity.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF07885::Ion_trans_2 99.63::86-158 GO:0043025::neuronal cell body very confident hh_2r9r_B_1::2-105,111-158 very confident psy12868 302 Q9ES08::Potassium channel subfamily K member 9 ::pH-dependent, voltage-insensitive, background potassium channel protein.::Rattus norvegicus (taxid: 10116) portable no hit no match PF07885::Ion_trans_2 99.53::189-270 GO:0043229::intracellular organelle confident hh_3ukm_A_1::2-47,55-59,68-155,159-167,169-235,238-270 very confident psy12956 370 Q9ERS1::Potassium channel subfamily K member 12 ::Probable potassium channel subunit. No channel activity observed in heterologous systems. May need to associate with another protein to form a functional channel.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07885::Ion_trans_2 99.52::107-183 GO:0044425::membrane part confident hh_3ukm_A_1::4-66,71-74,80-81,84-84,89-181 very confident psy4749 370 Q9ERS1::Potassium channel subfamily K member 12 ::Probable potassium channel subunit. No channel activity observed in heterologous systems. May need to associate with another protein to form a functional channel.::Rattus norvegicus (taxid: 10116) confident no hit no match PF07885::Ion_trans_2 99.52::107-183 GO:0044425::membrane part confident hh_3ukm_A_1::4-66,71-74,80-81,84-84,89-181 very confident psy13849 342 Q9NPC2::Potassium channel subfamily K member 9 ::pH-dependent, voltage-insensitive, background potassium channel protein.::Homo sapiens (taxid: 9606) confident no hit no match PF07885::Ion_trans_2 99.47::76-133 GO:0071805::potassium ion transmembrane transport very confident hh_3ukm_A_1::3-137,141-149,183-187,216-278,281-283,307-333 very confident psy1797 393 Q5E9Q4::Adaptin ear-binding coat-associated protein 2 ::Involved in endocytosis.::Bos taurus (taxid: 9913) portable no hit no match PF07933::DUF1681 100.00::184-321 GO:0005905::coated pit confident hh_1tqz_A_1::184-291 very confident psy18056 114 Q66I12::Coiled-coil domain-containing protein 47 ::::Danio rerio (taxid: 7955) confident no hit no match PF07946::DUF1682 99.90::4-101 GO:0005509::calcium ion binding confident no hit no match psy6771 493 Q66I12::Coiled-coil domain-containing protein 47 ::::Danio rerio (taxid: 7955) confident no hit no match PF07946::DUF1682 100.00::143-480 GO:0005509::calcium ion binding confident rp_1vt4_I_1::24-75,79-114,123-141,148-165,167-187,189-215,221-226,232-242,251-270,275-284,286-297,307-309,312-313,315-330,333-387 portable psy3792 224 Q91WA1::TIMELESS-interacting protein ::Required for normal progression of S-phase. Important for cell survival after DNA damage or replication stress. May be specifically required for the ATR-CHEK1 pathway in the replication checkpoint induced by hydroxyurea or ultraviolet light.::Mus musculus (taxid: 10090) confident no hit no match PF07962::Swi3 100.00::63-145 GO:0005794::Golgi apparatus confident no hit no match psy1573 104 Q96RQ1::Endoplasmic reticulum-Golgi intermediate compartment protein 2 ::Possible role in transport between endoplasmic reticulum and Golgi.::Homo sapiens (taxid: 9606) portable no hit no match PF07970::COPIIcoated_ERV 100.00::1-89 GO:0005794::Golgi apparatus confident no hit no match psy13967 379 Q803I2::Endoplasmic reticulum-Golgi intermediate compartment protein 3 ::Possible role in transport between endoplasmic reticulum and Golgi.::Danio rerio (taxid: 7955) confident no hit no match PF07970::COPIIcoated_ERV 100.00::151-356 GO:0033116::endoplasmic reticulum-Golgi intermediate compartment membrane confident rp_1vt4_I_1::37-100,104-160,165-176,178-185,193-207,211-229,232-240,245-300,312-329,332-341,348-368 portable psy6687 116 Q9W3W5::Protein shifted ::Required for normal accumulation and movement of lipid-modified hedgehog (hh) morphogen. May act by stabilizing the interaction between heparan sulfate proteoglycans (HSPGs) and hh, HSPGs being required for diffusion of hh morphogen. Not involved in wingless (wg) morphogen movement, suggesting that it may provide HSPG specificity for Hh.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07974::EGF_2 98.00::88-112 GO:0005794::Golgi apparatus confident hh_2ygq_A_1::1-49,53-114 very confident psy10559 418 O61307::Teneurin-m ::Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-a to organize neuromuscular synapses. Function in olfactory synaptic partner matching; promotes homophilic cell adhesion between pre-synaptic olfactory receptor neurons (ORN) axons and post-synaptic projection neurons (PN) dendrites partner in the developing antennal lobe to form stable connections. Also required for peripheral axon growth cone guidance and target recognition of motor neurons.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07974::EGF_2 97.35::13-36 GO:0005887::integral to plasma membrane confident hh_2ygq_A_1::8-51,53-54,58-99,102-113,120-136 very confident psy10560 74 Q9WTS5::Teneurin-2 ::May function as a cellular signal transducer.::Mus musculus (taxid: 10090) portable no hit no match PF07974::EGF_2 98.61::42-66 GO:0005887::integral to plasma membrane confident hh_2e26_A_1::25-72 confident psy17083 60 P18168::Protein serrate ::Acts as a ligand for Notch (N) receptor. Essential for proper ectodermal development. Serrate represents an element in a network of interacting molecules operating at the cell surface during the differentiation of certain tissues.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07974::EGF_2 98.07::3-24 GO:0030673::axolemma confident hh_2vj2_A_1::11-39,41-57 very confident psy8491 273 Q8N2E2::von Willebrand factor D and EGF domain-containing protein ::::Homo sapiens (taxid: 9606) portable no hit no match PF07974::EGF_2 96.16::51-70 GO:0031323::regulation of cellular metabolic process confident hh_2ygq_A_1::45-70,74-103,108-119,122-130,132-165,169-193,196-203 very confident psy3697 117 Q00546::Tenascin-R ::Neural extracellular matrix (ECM) protein involved in interactions with different cells and matrix components. Involved in cell attachment and neurite formation. Interaction with CNTN1 enhances the neurite outgrowth.::Gallus gallus (taxid: 9031) portable no hit no match PF07974::EGF_2 98.14::32-55 GO:0043229::intracellular organelle confident hh_3k6s_B_2::1-9,13-67,69-72,75-90 very confident psy9819 377 P60882::Multiple epidermal growth factor-like domains protein 8 ::::Mus musculus (taxid: 10090) portable no hit no match PF07974::EGF_2 97.73::304-327 GO:0044699::single-organism process confident hh_4aqs_A_2::78-81,83-182,184-194 very confident psy9568 248 Q9W3W5::Protein shifted ::Required for normal accumulation and movement of lipid-modified hedgehog (hh) morphogen. May act by stabilizing the interaction between heparan sulfate proteoglycans (HSPGs) and hh, HSPGs being required for diffusion of hh morphogen. Not involved in wingless (wg) morphogen movement, suggesting that it may provide HSPG specificity for Hh.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07974::EGF_2 97.80::24-48 GO:0070887::cellular response to chemical stimulus confident hh_2ygq_A_1::19-115,122-152,157-191 very confident psy4604 302 Q3SZE9::Tubulin-specific chaperone C ::Tubulin-folding protein; involved in the final step of the tubulin folding pathway.::Bos taurus (taxid: 9913) confident no hit no match PF07986::TBCC 100.00::196-299 GO:0007023::post-chaperonin tubulin folding pathway confident hh_2yuh_A_1::174-298 very confident psy13685 72 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable no hit no match PF07993::NAD_binding_4 98.41::2-60 GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident no hit no match psy10682 71 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable no hit no match PF07993::NAD_binding_4 97.84::10-57 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident no hit no match psy3448 154 Q8WVX9::Fatty acyl-CoA reductase 1 ::Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols.::Homo sapiens (taxid: 9606) portable no hit no match PF07993::NAD_binding_4 98.40::4-63 GO:0050062::long-chain-fatty-acyl-CoA reductase activity confident hh_4dqv_A_1::4-25,31-103 confident psy9026 81 O97477::Inositol-3-phosphate synthase ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF07994::NAD_binding_5 99.07::34-64 GO:0005622::intracellular confident hh_1p1j_A_1::14-81 very confident psy13301 194 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF08016::PKD_channel 90.32::5-95 GO:0005875::microtubule associated complex confident hh_4dxw_A_1::2-18,27-42,45-58,60-66,68-97 portable psy11140 89 Q09624::Location of vulva defective 1 ::Required for two aspects of male mating behavior: response to hermaphrodite contact and vulva location. Acts in the same pathway as pkd-2 and atp-2 in response behavior. May be required for ciliary targeting of pkd-2.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF08016::PKD_channel 99.97::2-85 GO:0031090::organelle membrane confident no hit no match psy14514 91 Q4GZT3::Polycystin-2 ::Functions as a calcium permeable cation channel. PKD1 and PKD2 may function through a common signaling pathway that is necessary for normal tubulogenesis.::Bos taurus (taxid: 9913) portable no hit no match PF08016::PKD_channel 99.90::28-91 GO:0031090::organelle membrane confident no hit no match psy16308 371 Q8IZK6::Mucolipin-2 ::::Homo sapiens (taxid: 9606) confident no hit no match PF08016::PKD_channel 99.91::4-180 GO:0031902::late endosome membrane confident hh_4dxw_A_1::5-14,19-32,39-39,47-143,148-182 confident psy7028 707 P79100::Short transient receptor potential channel 4 ::Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion. Acts as a cell-cell contact-dependent endothelial calcium entry channel.::Bos taurus (taxid: 9913) portable no hit no match PF08016::PKD_channel 99.88::193-448 GO:0035997::rhabdomere microvillus membrane confident hh_4dxw_A_1::193-245,281-341,360-363,380-406,408-412,415-450 confident psy14478 206 Q9XSM3::Transient receptor potential cation channel subfamily V member 5 ::Constitutively active calcium selective cation channel thought to be involved in Ca(2+) reabsorption in kidney and intestine. The channel is activated by low internal calcium level and the current exhibits an inward rectification. A Ca(2+)-dependent feedback regulation includes fast channel inactivation and slow current decay. Heteromeric assembly with TRPV6 seems to modify channel properties. TRPV5-TRPV6 heteromultimeric concatemers exhibit voltage-dependent gating.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF08016::PKD_channel 99.52::5-117 GO:0044425::membrane part confident hh_4dxw_A_1::48-119 portable psy10257 166 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF08045::CDC14 90.82::43-118 GO:0043025::neuronal cell body confident hh_1xqr_A_1::43-61,65-65,73-117 portable psy10455 99 Q6PDQ2::Chromodomain-helicase-DNA-binding protein 4 ::Component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin by deacetylating histones.::Mus musculus (taxid: 10090) confident no hit no match PF08074::CHDCT2 99.88::1-60 GO:0045111::intermediate filament cytoskeleton confident no hit no match psy7569 71 Q28XF0::Ribosome biogenesis protein BOP1 homolog ::Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF08145::BOP1NT 99.79::30-71 GO:0051726::regulation of cell cycle confident no hit no match psy15711 248 Q6CM00::Nucleolar GTP-binding protein 1 ::Involved in the biogenesis of the 60S ribosomal subunit.::Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590) portable no hit no match PF08155::NOGCT 99.68::28-68 GO:0005794::Golgi apparatus confident no hit no match psy9696 96 A5D7C2::Protein SDA1 homolog ::Required for 60S pre-ribosomal subunits export to the cytoplasm.::Bos taurus (taxid: 9913) confident no hit no match PF08158::NUC130_3NT 98.81::1-22 GO:0005730::nucleolus confident hh_2qk2_A_1::3-19,22-85 portable psy3288 97 Q8C6B2::Rhotekin ::Mediates Rho signaling to activate NF-kappa-B and may confer increased resistance to apoptosis to cells in gastric tumorigenesis. May play a novel role in the organization of septin structures.::Mus musculus (taxid: 10090) confident no hit no match PF08174::Anillin 99.90::6-85 GO:0005095::GTPase inhibitor activity confident no hit no match psy7728 65 no hit no match no hit no match PF08205::C2-set_2 98.71::36-63 GO:0005768::endosome confident hh_1zxq_A_1::6-27,32-64 very confident psy11496 607 Q4V8K2::Beta-catenin-like protein 1 ::Induces apoptosis in CHO cells.::Rattus norvegicus (taxid: 10116) very confident no hit no match PF08216::CTNNBL 100.00::70-174 GO:0005681::spliceosomal complex confident hh_2z6h_A_1::129-184,191-191,196-215,222-265,268-308,314-314,318-374,377-402,411-431 confident psy15690 236 Q28XK6::Pre-mRNA-splicing factor Syf2 ::May be involved in pre-mRNA splicing.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) very confident no hit no match PF08231::SYF2 100.00::84-231 GO:0071011::precatalytic spliceosome very confident rp_1vt4_I_1::8-30,32-35,39-50,54-62,64-93,103-217 portable psy17136 225 P58405::Striatin-3 ::Binds calmodulin in a calcium dependent manner. May function as scaffolding or signaling protein.::Rattus norvegicus (taxid: 10116) confident no hit no match PF08232::Striatin 100.00::40-176 GO:0005923::tight junction confident no hit no match psy18108 102 Q9R013::Cathepsin F ::Thiol protease which is believed to participate in intracellular degradation and turnover of proteins. Has also been implicated in tumor invasion and metastasis.::Mus musculus (taxid: 10090) portable no hit no match PF08246::Inhibitor_I29 99.87::34-91 GO:0005773::vacuole confident hh_3f75_P_1::25-71,73-100 very confident psy5551 172 Q54CV5::Probable inactive serine/threonine-protein kinase bub1 ::::Dictyostelium discoideum (taxid: 44689) portable no hit no match PF08311::Mad3_BUB1_I 100.00::33-157 GO:0000777::condensed chromosome kinetochore confident hh_3esl_A_1::29-171 very confident psy1931 145 Q9UQ35::Serine/arginine repetitive matrix protein 2 ::Involved in pre-mRNA splicing. May function at or prior to the first catalytic step of splicing at the catalytic center of the spliceosome. May do so by stabilizing the catalytic center or the position of the RNA substrate (By similarity). Binds to RNA.::Homo sapiens (taxid: 9606) confident no hit no match PF08312::cwf21 99.73::57-101 GO:0005681::spliceosomal complex confident hh_2e62_A_1::57-100 confident psy2132 48 Q00168::Calcium/calmodulin-dependent protein kinase type II alpha chain ::A key regulator of plasticity in synaptic physiology and behavior, alterations in its activity produce pleiotrophic effects that involve synaptic transmission and development as well as various aspects of behavior. Directly modulates eag potassium channels.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF08332::CaMKII_AD 99.77::1-48 GO:0045211::postsynaptic membrane confident hh_2f86_B_1::1-10,14-47 very confident psy8176 159 Q5ZLK5::Prolyl 4-hydroxylase subunit alpha-2 ::Catalyzes the post-translational formation of 4-hydroxyproline in -Xaa-Pro-Gly- sequences in collagens and other proteins.::Gallus gallus (taxid: 9031) portable no hit no match PF08336::P4Ha_N 100.00::3-94 GO:0031545::peptidyl-proline 4-dioxygenase activity confident hh_2v5f_A_1::99-141,143-159 very confident psy15505 2400 Q80UG2::Plexin-A4 ::Coreceptor for SEMA3A. Necessary for signaling by class 3 semaphorins and subsequent remodeling of the cytoskeleton. Plays a role in axon guidance in the developing nervous system. Class 3 semaphorins bind to a complex composed of a neuropilin and a plexin. The plexin modulates the affinity of the complex for specific semaphorins, and its cytoplasmic domain is required for the activation of down-stream signaling events in the cytoplasm.::Mus musculus (taxid: 10090) portable no hit no match PF08337::Plexin_cytopl 100.00::1678-2186 GO:0016199::axon midline choice point recognition confident hh_3ig3_A_1::1632-1708,1710-2215 very confident psy4453 187 O62852::Short transient receptor potential channel 5 ::Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match PF08344::TRP_2 96.76::2-26 GO:0043229::intracellular organelle confident no hit no match psy11434 151 Q91XQ0::Dynein heavy chain 8, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly.::Mus musculus (taxid: 10090) confident no hit no match PF08393::DHC_N2 100.00::3-141 GO:0031514::motile cilium confident hh_3vkg_A_1::3-49,51-58,61-141 very confident psy17978 174 Q9C0G6::Dynein heavy chain 6, axonemal ::Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Homo sapiens (taxid: 9606) confident no hit no match PF08393::DHC_N2 100.00::2-174 GO:0031514::motile cilium confident hh_3vkg_A_1::2-18,21-50,53-70,73-174 very confident psy12687 143 Q19020::Dynein heavy chain, cytoplasmic ::Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF08393::DHC_N2 99.92::5-143 GO:0043234::protein complex confident hh_3vkg_A_1::3-43,49-143 very confident psy10344 189 O43312::Metastasis suppressor protein 1 ::May be related to cancer progression or tumor metastasis in a variety of organ sites, most likely through an interaction with the actin cytoskeleton.::Homo sapiens (taxid: 9606) confident no hit no match PF08397::IMD 99.97::2-113 GO:0005515::protein binding confident hh_2d1l_A_1::2-122 very confident psy11234 98 Q3UV71::Transmembrane and TPR repeat-containing protein 1 ::::Mus musculus (taxid: 10090) confident no hit no match PF08409::DUF1736 99.96::2-61 GO:0005739::mitochondrion confident no hit no match psy17886 198 Q920E3::Potassium voltage-gated channel subfamily H member 5 ::Pore-forming (alpha) subunit of voltage-gated potassium channel. Elicits a non-inactivating outward rectifying current (By similarity). Channel properties may be modulated by cAMP and subunit assembly.::Mus musculus (taxid: 10090) confident no hit no match PF08412::Ion_trans_N 98.97::5-68 GO:0005887::integral to plasma membrane confident hh_2r9r_B_1::33-96,100-100,111-195 confident psy1121 122 Q90805::Cyclic nucleotide-gated channel cone photoreceptor subunit alpha ::Visual signal transduction is mediated by a G-protein coupled cascade using cGMP as second messenger. This protein can be activated by cyclic GMP which leads to an opening of the cation channel and thereby causing a depolarization of cone photoreceptors.::Gallus gallus (taxid: 9031) confident no hit no match PF08412::Ion_trans_N 99.21::12-72 GO:0030553::cGMP binding confident hh_1orq_C_1::47-71,73-103 portable psy15518 195 Q9TSZ3::Potassium voltage-gated channel subfamily H member 2 ::Pore-forming (alpha) subunit of voltage-gated inwardly rectifying potassium channel. Channel properties are modulated by cAMP and subunit assembly. Mediates the rapidly activating component of the delayed rectifying potassium current in heart (IKr).::Canis familiaris (taxid: 9615) confident no hit no match PF08412::Ion_trans_N 98.88::18-69 GO:0051291::protein heterooligomerization very confident hh_4dxw_A_1::41-62,64-65,67-69,80-107,113-113,122-173 portable psy1434 357 P34446::Integrin alpha pat-2 ::Required for distal tip cell migration and dorsal pathfinding. Postulated to have a role in cell motility. Possible role in cell-cell interactions.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF08441::Integrin_alpha2 98.85::250-356 GO:0043234::protein complex confident hh_3k6s_A_1::3-55,57-111,118-176,178-207,212-239,242-253,264-275,280-303,305-313,315-329,331-356 very confident psy5489 94 A2ARA8::Integrin alpha-8 ::Integrin alpha-8/beta-1 functions in the genesis of kidney and probably of other organs by regulating the recruitment of mesenchymal cells into epithelial structures. It recognizes the sequence R-G-D in a wide array of ligands including TNC, FN1, SPP1 TGFB1, TGFB3 and VTN. NPNT is probably its functional ligand in kidney genesis. Neuronal receptor for TNC it mediates cell-cell interactions and regulates neurite outgrowth of sensory and motor neurons.::Mus musculus (taxid: 10090) portable no hit no match PF08441::Integrin_alpha2 99.82::4-94 GO:0044763::single-organism cellular process confident hh_3fcs_A_1::4-14,18-94 very confident psy349 103 Q8CIA5::UDP-xylose and UDP-N-acetylglucosamine transporter ::Sugar transporter that specifically mediates the transport of UDP-xylose (UDP-Xyl) and UDP-N-acetylglucosamine (UDP-GlcNAc) from cytosol into Golgi.::Mus musculus (taxid: 10090) confident no hit no match PF08449::UAA 99.84::2-103 GO:0005458::GDP-mannose transmembrane transporter activity confident no hit no match psy13005 130 Q5R946::Phosphatidylinositol N-acetylglucosaminyltransferase subunit P ::Part of the complex catalyzing the transfer of N-acetylglucosamine from UDP-N-acetylglucosamine to phosphatidylinositol, the first step of GPI biosynthesis.::Pongo abelii (taxid: 9601) confident no hit no match PF08510::PIG-P 100.00::10-125 GO:0017176::phosphatidylinositol N-acetylglucosaminyltransferase activity confident hh_3arc_E_1::52-72,75-89 portable psy17986 147 Q5R532::Macrophage erythroblast attacher ::Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.::Pongo abelii (taxid: 9601) portable no hit no match PF08513::LisH 97.83::71-97 GO:0005634::nucleus confident hh_1uuj_A_1::69-101 portable psy16154 105 Q9JLQ2::ARF GTPase-activating protein GIT2 ::GTPase-activating protein for the ADP ribosylation factor family.::Mus musculus (taxid: 10090) confident no hit no match PF08518::GIT_SHD 99.33::49-78 GO:0005654::nucleoplasm confident no hit no match psy6917 132 Q9CWX2::Complex I intermediate-associated protein 30, mitochondrial ::Chaperone protein involved in the assembly of the mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).::Mus musculus (taxid: 10090) confident no hit no match PF08547::CIA30 99.87::27-100 GO:0005739::mitochondrion confident hh_1v0a_A_1::53-62,65-95,98-112 portable psy6915 127 Q9CWX2::Complex I intermediate-associated protein 30, mitochondrial ::Chaperone protein involved in the assembly of the mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).::Mus musculus (taxid: 10090) confident no hit no match PF08547::CIA30 99.96::1-95 GO:0005739::mitochondrion confident hh_1v0a_A_1::1-30,32-41,44-57,60-90,93-106 confident psy6545 59 P41846::Protein WBSCR14 homolog ::Transcriptional repressor. Binds to the canonical and non-canonical E box sequences 5'-CACGTG-3'.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF08550::DUF1752 92.51::11-37 GO:0008284::positive regulation of cell proliferation confident hh_4gnt_B_1::22-44 confident psy12835 291 P91891::Protein Mo25 ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF08569::Mo25 100.00::3-154 GO:0001700::embryonic development via the syncytial blastoderm confident hh_1upk_A_1::3-156 very confident psy5091 112 Q3SZM6::COX assembly mitochondrial protein homolog ::Required for mitochondrial cytochrome c oxidase (COX) assembly and respiration. Binds copper. May be involved in copper trafficking and distribution to mitochondrial COX and SOD1.::Bos taurus (taxid: 9913) confident no hit no match PF08583::Cmc1 99.77::18-87 GO:0005739::mitochondrion confident hh_2lql_A_1::25-28,30-48,50-67 portable psy6173 137 Q7SZE3::Lethal(2) giant larvae protein homolog 2 ::Essential for hemidesmosome formation and maintenance of the cytoskeleton elements as well as cellular morphology in the basal epidermis during development. Also involved in regulating growth of the basal epidermis.::Danio rerio (taxid: 7955) portable no hit no match PF08596::Lgl_C 98.03::27-135 GO:0005856::cytoskeleton confident hh_2oaj_A_1::26-76,82-91,103-104,106-119,121-131,133-135 confident psy15420 187 Q3U1T3::Breast cancer metastasis-suppressor 1-like protein ::Involved in the histone deacetylase (HDAC1)-dependent transcriptional repression activity. When overexpressed in lung cancer cell line that lacks p53/TP53 expression, inhibits cell growth.::Mus musculus (taxid: 10090) confident no hit no match PF08598::Sds3 100.00::4-174 GO:0051059::NF-kappaB binding confident hh_2xus_A_1::4-35 portable psy17499 147 P36621::Adenylyl cyclase-associated protein ::The N-terminal domain binds to adenylyl cyclase, thereby enabling adenylyl cyclase to be activated by upstream regulatory signals, such as Ras. The C-terminal domain is required for normal cellular morphology and growth control.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF08603::CAP_C 100.00::1-143 GO:0044444::cytoplasmic part confident hh_1k8f_A_1::1-70,100-136,138-143 very confident psy8505 118 Q7Q6Y4::Mediator of RNA polymerase II transcription subunit 20 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Anopheles gambiae (taxid: 7165) confident no hit no match PF08612::Med20 99.97::3-115 GO:0006357::regulation of transcription from RNA polymerase II promoter confident hh_2hzm_A_1::3-14,16-33,35-82,84-117 confident psy4580 72 no hit no match no hit no match PF08614::ATG16 93.84::2-57 GO:0043234::protein complex confident hh_3a7p_A_1::4-57 portable psy17341 232 O88485::Cytoplasmic dynein 1 intermediate chain 1 ::Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. May play a role in mediating the interaction of cytoplasmic dynein with membranous organelles and kinetochores.::Mus musculus (taxid: 10090) portable no hit no match PF08662::eIF2A 94.16::162-231 GO:0005868::cytoplasmic dynein complex confident hh_3l9k_W_1::62-99 very confident psy6185 79 Q5ZHN3::WD repeat domain phosphoinositide-interacting protein 2 ::Probable early component of the autophagy machinery being involved in formation of preautophagosomal structures and their maturation into mature phagosomes in response to PtdIns3P. May bind PtdIns3P.::Gallus gallus (taxid: 9031) confident no hit no match PF08662::eIF2A 95.38::2-78 GO:0043234::protein complex confident hh_3vu4_A_1::1-27,31-61,63-78 confident psy4941 172 A2ALU4::Protein Shroom2 ::May be involved in endothelial cell morphology changes during cell spreading. In the retinal pigment epithelium, may regulate the biogenesis of melanosomes and promote their association with the apical cell surface by inducing gamma-tubulin redistribution.::Mus musculus (taxid: 10090) portable no hit no match PF08687::ASD2 100.00::1-168 GO:0043234::protein complex confident hh_3thf_A_1::1-78,82-170 very confident psy4622 84 no hit no match no hit no match PF08693::SKG6 94.29::6-34 GO:0005886::plasma membrane confident hh_2k1k_A_1::6-17,19-34 portable psy5196 252 Q69VD5::Protein argonaute PNH1 ::Probably involved in the RNA silencing pathway. May bind to short RNAs such as microRNAs (miRNAs) or short interfering RNAs (siRNAs), and represses the translation of mRNAs which are complementary to them (By similarity). Plays a role in the maintenance of the indeterminate state of the stem cells in the shoot apical meristem (SAM). Regulates leaf formation through vascular development and may be involved in determining the central domain of the leaf founder region.::Oryza sativa subsp. japonica (taxid: 39947) portable no hit no match PF08699::DUF1785 99.80::178-230 GO:0035197::siRNA binding confident hh_4f3t_A_1::19-30,33-53,56-112,114-173,176-186,188-243 very confident psy10569 128 Q00722::1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 ::The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.::Homo sapiens (taxid: 9606) portable no hit no match PF08703::PLC-beta_C 100.00::2-118 GO:0005829::cytosol confident hh_1jad_A_1::2-39,42-118 confident psy1373 231 Q9CZP5::Mitochondrial chaperone BCS1 ::Chaperone necessary for the assembly of mitochondrial respiratory chain complex III. Plays an important role in the maintenance of mitochondrial tubular networks, respiratory chain assembly and formation of the LETM1 complex.::Mus musculus (taxid: 10090) confident no hit no match PF08740::BCS1_N 100.00::23-191 GO:0034551::mitochondrial respiratory chain complex III assembly confident no hit no match psy9354 308 Q17QZ4::Transcription factor Dp-1 ::Can stimulate E2F-dependent transcription. Binds DNA cooperatively with E2F family members through the E2 recognition site, 5'-TTTC[CG]CGC-3', found in the promoter region of a number of genes whose products are involved in cell cycle regulation or in DNA replication. The DP2/E2F complex functions in the control of cell-cycle progression from G1 to S phase. The E2F-1/DP complex appears to mediate both cell proliferation and apoptosis.::Bos taurus (taxid: 9913) confident no hit no match PF08781::DP 100.00::112-253 GO:0006915::apoptotic process confident hh_2aze_A_1::109-254 very confident psy1165 461 Q60698::Ski oncogene ::May play a role in terminal differentiation of skeletal muscle cells but not in the determination of cells to the myogenic lineage. Functions as a repressor of TGF-beta signaling.::Mus musculus (taxid: 10090) confident no hit no match PF08782::c-SKI_SMAD_bind 100.00::196-288 GO:0003714::transcription corepressor activity confident hh_1sbx_A_1::74-83,85-179 very confident psy11354 120 O43172::U4/U6 small nuclear ribonucleoprotein Prp4 ::Involved in pre-mRNA splicing.::Homo sapiens (taxid: 9606) confident no hit no match PF08799::PRP4 99.55::87-116 GO:0071013::catalytic step 2 spliceosome confident hh_1mzw_B_1::86-116 very confident psy16846 253 Q60592::Microtubule-associated serine/threonine-protein kinase 2 ::Appears to link the dystrophin/utrophin network with microtubule filaments via the syntrophins. Phosphorylation of DMD or UTRN may modulate their affinities for associated proteins. Functions in a multi-protein complex in spermatid maturation. Regulates lipopolysaccharide-induced IL-12 synthesis in macrophages by forming a complex with TRAF6, resulting in the inhibition of TRAF6 NF-kappa-B activation.::Mus musculus (taxid: 10090) portable no hit no match PF08926::DUF1908 99.85::187-252 GO:0044424::intracellular part confident no hit no match psy12906 303 Q8BH75::E3 ubiquitin-protein ligase NRDP1 ::Acts as E3 ubiquitin-protein ligase and regulates the degradation of target proteins. Contributes to the maintenance of steady-state ERBB3 levels by mediating its growth factor-independent degradation. Involved in the degradation of the inhibitor of apoptosis BIRC6 and thus is an important regulator of cell death by promoting apoptosis. Acts also as a PARK2 modifier that accelerates its degradation, resulting in a reduction of PARK2 activity, influencing the balance of intracellular redox state. Polyubiquitinates MYD88 (By similarity). Negatively regulates MYD88-dependent production of proinflammatory cytokines but can promote TRIF-dependent production of type I interferon and inhibits infection with vesicular stomatitis virus. Promotes also activation of TBK1 and IRF3. Involved in the ubiquitination of erythropoietin (EPO) and interleukin-3 (IL-3) receptors. Thus, through maintaining basal levels of cytokine receptors, FLRF is involved in the control of hematopoietic progenitor cell differentiation into myeloerythroid lineages.::Mus musculus (taxid: 10090) confident no hit no match PF08941::USP8_interact 100.00::125-303 GO:0030336::negative regulation of cell migration confident hh_2fzp_A_1::175-303 very confident psy3031 136 Q9BR76::Coronin-1B ::Regulates leading edge dynamics and cell motility in fibroblasts. May be involved in cytokinesis and signal transduction.::Homo sapiens (taxid: 9606) confident no hit no match PF08953::DUF1899 99.97::4-68 GO:0072686::mitotic spindle very confident hh_2aq5_A_1::1-87,91-113 very confident psy17484 283 Q8BW74::Hepatic leukemia factor ::::Mus musculus (taxid: 10090) confident no hit no match PF09006::Surfac_D-trimer 91.65::255-282 GO:0001077::RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription confident hh_4dzn_A_1::255-275 portable psy13267 101 A2VB89::Bursicon ::Final heterodimeric neurohormone released at the end of the molting cycle, involved in the sclerotization (tanning) of the insect cuticle, melanization and wing spreading.::Apis mellifera (taxid: 7460) confident no hit no match PF09026::CENP-B_dimeris 93.71::59-65 GO:0043195::terminal bouton confident no hit no match psy1883 81 P31007::Disks large 1 tumor suppressor protein ::During embryonic development, some isoforms are essential for proper neuronal differentiation and organization. Required for cell polarity; maintenance of apicobasal polarity. Plays a critical role at septate junctions in cellular growth control during larval development. The presence of a guanylate kinase domain suggests involvement in cellular adhesion as well as signal transduction to control cellular proliferation.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09058::L27_1 99.96::14-69 GO:0043195::terminal bouton confident hh_3lra_A_1::14-69 very confident psy5562 250 Q9DBG3::AP-2 complex subunit beta ::Component of the adaptor protein complex 2 (AP-2) Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but is itself unable to bind directly to membrane components. Clathrin-associated adaptor protein (AP) complexes which can bind directly to both the clathrin lattice and to the lipid and protein components of membranes are considered to be the major clathrin adaptors contributing the CCV formation. AP-2 also serves as a cargo receptor to selectively sort the membrane proteins involved in receptor-mediated endocytosis. AP-2 seems to play a role in the recycling of synaptic vesicle membranes from the presynaptic surface. AP-2 recognizes Y-X-X-[FILMV] (Y-X-X-Phi) and [ED]-X-X-X-L-[LI] endocytosis signal motifs within the cytosolic tails of transmembrane cargo molecules. AP-2 may also play a role in maintaining normal post-endocytic trafficking through the ARF6-regulated, non-clathrin pathway. The AP-2 beta subunit acts via its C-terminal appendage domain as a scaffolding platform for endocytic accessory proteins; at least some clathrin-associated sorting proteins (CLASPs) are recognized by their [DE]-X(1,2)-F-X-X-[FL]-X-X-X-R motif. The AP-2 beta subunit binds to clathrin heavy chain, promoting clathrin lattice assembly; clathrin displaces at least some CLASPs from AP2B1 which probably then can be positioned for further coat assembly.::Mus musculus (taxid: 10090) confident no hit no match PF09066::B2-adapt-app_C 99.94::128-247 GO:0051649::establishment of localization in cell confident hh_2g30_A_1::2-27,35-151,161-248 very confident psy8027 250 Q9DBG3::AP-2 complex subunit beta ::Component of the adaptor protein complex 2 (AP-2) Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold but is itself unable to bind directly to membrane components. Clathrin-associated adaptor protein (AP) complexes which can bind directly to both the clathrin lattice and to the lipid and protein components of membranes are considered to be the major clathrin adaptors contributing the CCV formation. AP-2 also serves as a cargo receptor to selectively sort the membrane proteins involved in receptor-mediated endocytosis. AP-2 seems to play a role in the recycling of synaptic vesicle membranes from the presynaptic surface. AP-2 recognizes Y-X-X-[FILMV] (Y-X-X-Phi) and [ED]-X-X-X-L-[LI] endocytosis signal motifs within the cytosolic tails of transmembrane cargo molecules. AP-2 may also play a role in maintaining normal post-endocytic trafficking through the ARF6-regulated, non-clathrin pathway. The AP-2 beta subunit acts via its C-terminal appendage domain as a scaffolding platform for endocytic accessory proteins; at least some clathrin-associated sorting proteins (CLASPs) are recognized by their [DE]-X(1,2)-F-X-X-[FL]-X-X-X-R motif. The AP-2 beta subunit binds to clathrin heavy chain, promoting clathrin lattice assembly; clathrin displaces at least some CLASPs from AP2B1 which probably then can be positioned for further coat assembly.::Mus musculus (taxid: 10090) confident no hit no match PF09066::B2-adapt-app_C 99.94::128-247 GO:0051649::establishment of localization in cell confident hh_2g30_A_1::2-27,35-151,161-248 very confident psy180 77 Q32PJ3::Origin recognition complex subunit 3 ::Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.::Bos taurus (taxid: 9913) confident no hit no match PF09079::Cdc6_C 93.55::5-61 GO:0072686::mitotic spindle confident hh_2krc_A_1::1-37,39-50 portable psy8413 796 Q3UYV9::Nuclear cap-binding protein subunit 1 ::Component of the cap-binding complex (CBC), which binds co-transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense-mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus via its interaction with ALYREF/THOC4/ALY, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U snRNA and intronless mRNAs export from the nucleus. The CBC complex is essential for a pioneer round of mRNA translation, before steady state translation when the CBC complex is replaced by cytoplasmic cap-binding protein eIF4E. The pioneer round of mRNA translation mediated by the CBC complex plays a central role in nonsense-mediated mRNA decay (NMD), NMD only taking place in mRNAs bound to the CBC complex, but not on eIF4E-bound mRNAs. The CBC complex enhances NMD in mRNAs containing at least one exon-junction complex (EJC) via its interaction with UPF1, promoting the interaction between UPF1 and UPF2. The CBC complex is also involved in 'failsafe' NMD, which is independent of the EJC complex, while it does not participate in Staufen-mediated mRNA decay (SMD). During cell proliferation, the CBC complex is also involved in microRNAs (miRNAs) biogenesis via its interaction with SRRT/ARS2 and is required for miRNA-mediated RNA interference. The CBC complex also acts as a negative regulator of PARN, thereby acting as an inhibitor of mRNA deadenylation. In the CBC complex, NCBP1/CBP80 does not bind directly capped RNAs (m7GpppG-capped RNA) but is required to stabilize the movement of the N-terminal loop of NCBP2/CBP20 and lock the CBC into a high affinity cap-binding state with the cap structure.::Mus musculus (taxid: 10090) very confident no hit no match PF09088::MIF4G_like 100.00::310-475 GO:0005845::mRNA cap binding complex very confident hh_1h2v_C_1::24-303,307-516,518-581,583-685,688-796 very confident psy14466 231 Q3B7H2::Mitochondrial translocator assembly and maintenance protein 41 homolog ::May be involved in the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.::Danio rerio (taxid: 7955) confident no hit no match PF09139::Mmp37 100.00::19-230 GO:0005739::mitochondrion confident hh_3jz0_A_1::14-27,29-46,50-68,77-77,79-90,92-97,101-102,104-110,113-125,127-133 portable psy1634 132 O77783::Exostosin-2 ::Glycosyltransferase required for the biosynthesis of heparan-sulfate and responsible for the alternating addition of beta-1-4-linked glucuronic acid (GlcA) and alpha-1-4-linked N-acetylglucosamine (GlcNAc) units to nascent heparan sulfate chains.::Bos taurus (taxid: 9913) confident no hit no match PF09258::Glyco_transf_64 100.00::1-115 GO:0005794::Golgi apparatus confident hh_1omz_A_1::1-18,20-62,64-94,100-116 very confident psy16950 430 Q9V730::Exostosin-1 ::Glycosyltransferase required for the biosynthesis of heparan-sulfate and responsible for the alternating addition of beta-1-4-linked glucuronic acid (GlcA) and alpha-1-4-linked N-acetylglucosamine (GlcNAc) units to nascent heparan sulfate chains. Botv is the trigger of heparan sulfate chain initiation and polymerization takes place by a complex of ttv and sotv. Plays a central role in diffusion of morphogens hedgehog (hh), wingless (wg) and decapentaplegic (dpp) via its role in heparan sulfate proteoglycans (HSPGs) biosynthesis which are required for movement of hh, dpp and wg morphogens.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09258::Glyco_transf_64 100.00::168-411 GO:0005794::Golgi apparatus confident hh_1omz_A_1::143-152,154-210,213-213,218-285,287-320,322-367,370-412 very confident psy979 176 O01705::Exostosin-2 ::Probable alpha1,4-N-acetylglucosaminyltransferase required for the biosynthesis of heparan-sulfate.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF09258::Glyco_transf_64 100.00::19-165 GO:0008375::acetylglucosaminyltransferase activity confident hh_1omz_A_1::14-60,62-105,107-124,126-163 very confident psy11113 699 O43909::Exostosin-like 3 ::Probable glycosyltransferase.::Homo sapiens (taxid: 9606) confident no hit no match PF09258::Glyco_transf_64 100.00::553-696 GO:0030307::positive regulation of cell growth confident hh_1omz_A_1::545-670,673-696 very confident psy14289 297 P28159::Suppressor of hairless protein ::Transcriptional regulator that plays a central role in Notch signaling, a signaling pathway involved in cell-cell communication that regulates a broad spectrum of cell-fate determinations. Binds directly the 5'-GTGRGAR-3' DNA consensus sequence, which is present in the regulatory region of several genes. Required for neurogenesis in imaginal disks. Acts as a transcriptional repressor when it is not associated with Notch proteins. When associated with some Notch protein, it acts as a transcriptional activator that activates transcription of Notch target genes. Specifically binds to the immunoglobulin kappa-type J segment recombination signal sequence. Required for transcription of Sim. Also functions independently of Notch pathway, in the development of the bristle sensory organ precursor cell.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09271::LAG1-DNAbind 100.00::99-231 GO:0000979::RNA polymerase II core promoter sequence-specific DNA binding confident rp_3iag_C_1::80-170,172-294 very confident psy17890 118 P28159::Suppressor of hairless protein ::Transcriptional regulator that plays a central role in Notch signaling, a signaling pathway involved in cell-cell communication that regulates a broad spectrum of cell-fate determinations. Binds directly the 5'-GTGRGAR-3' DNA consensus sequence, which is present in the regulatory region of several genes. Required for neurogenesis in imaginal disks. Acts as a transcriptional repressor when it is not associated with Notch proteins. When associated with some Notch protein, it acts as a transcriptional activator that activates transcription of Notch target genes. Specifically binds to the immunoglobulin kappa-type J segment recombination signal sequence. Required for transcription of Sim. Also functions independently of Notch pathway, in the development of the bristle sensory organ precursor cell.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09271::LAG1-DNAbind 100.00::46-118 GO:0000980::RNA polymerase II distal enhancer sequence-specific DNA binding confident hh_3iag_C_1::27-118 very confident psy4586 294 Q9UMX0::Ubiquilin-1 ::Links CD47 to the cytoskeleton. Promotes the surface expression of GABA-A receptors (By similarity). Promotes the accumulation of uncleaved PSEN1 and PSEN2 by stimulating their biosynthesis. Has no effect on PSEN1 and PSEN2 degradation.::Homo sapiens (taxid: 9606) confident no hit no match PF09280::XPC-binding 96.05::69-111 GO:0031597::cytosolic proteasome complex confident hh_2llv_A_1::61-89,98-117 portable psy8928 134 Q2VPQ9::Chromatin modification-related protein MEAF6 ::Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histone H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. Component of the HBO1 complex which has a histone H4-specific acetyltransferase activity, a reduced activity toward histone H3 and is responsible for the bulk of histone H4 acetylation in vivo. Component of the MOZ/MORF complex which has a histone H3 acetyltransferase activity.::Mus musculus (taxid: 10090) confident no hit no match PF09340::NuA4 100.00::14-120 GO:0035267::NuA4 histone acetyltransferase complex confident hh_2yy0_A_1::5-40 portable psy5112 184 Q9W5D0::Uncharacterized protein CG42248 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09379::FERM_N 99.50::22-133 GO:0030027::lamellipodium confident hh_3pvl_A_1::1-10,17-54,57-68,72-82,98-116,119-184 very confident psy17656 85 O43491::Band 4.1-like protein 2 ::::Homo sapiens (taxid: 9606) portable no hit no match PF09379::FERM_N 99.82::27-83 GO:0043234::protein complex confident hh_3qij_A_1::19-83 very confident psy11813 70 P35241::Radixin ::Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF09379::FERM_N 99.84::9-67 GO:0051286::cell tip very confident hh_2i1j_A_1::1-67 very confident psy11810 93 P35241::Radixin ::Probably plays a crucial role in the binding of the barbed end of actin filaments to the plasma membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF09379::FERM_N 99.84::25-90 GO:0051286::cell tip very confident bp_2i1j_A_1::21-81 very confident psy10562 135 O94887::FERM, RhoGEF and pleckstrin domain-containing protein 2 ::Rho-guanine nucleotide exchange factor that activates RAC1. Plays a role in the response to class 3 semaphorins and remodeling of the actin cytoskeleton.::Homo sapiens (taxid: 9606) confident no hit no match PF09380::FERM_C 99.96::30-119 GO:0043234::protein complex confident hh_3qij_A_1::1-113 very confident psy3983 318 Q7PS12::Moesin/ezrin/radixin homolog 1 ::Involved in connections of major cytoskeletal structures to the plasma membrane.::Anopheles gambiae (taxid: 7165) confident no hit no match PF09380::FERM_C 99.85::61-212 GO:0051286::cell tip confident hh_2i1j_A_1::2-84,147-316 very confident psy10712 75 Q02256::Tyrosine-protein phosphatase YVH1 ::May be directly involved in signal transduction and/or cell cycle regulation. It is necessary for maintaining growth rate or spore germination. Could show both activity toward tyrosine-protein phosphate as well as with serine-protein phosphate.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF09538::FYDLN_acid 92.18::15-48 GO:0005634::nucleus confident no hit no match psy2364 119 P21519::Neurogenic protein mastermind ::May have a regulatory function possibly in association with the Notch gene product.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09596::MamL-1 100.00::6-66 GO:0005730::nucleolus confident hh_2f8x_M_1::6-67 very confident psy7139 876 Q66I84::Sister chromatid cohesion protein DCC1 ::Loads pcna onto primed templates regulating velocity, spacing and restart activity of replication forks. May couple DNA replication to sister chromatid cohesion.::Danio rerio (taxid: 7955) portable no hit no match PF09724::DUF2036 100.00::391-876 GO:0043232::intracellular non-membrane-bounded organelle confident rp_1vt4_I_1::249-274,285-307,316-324,327-338,340-356,359-429,440-466,474-477,480-490,493-493,503-510,514-586,590-595,614-638,641-647,652-657,661-670,679-704,710-734,736-738,741-751,753-762,772-774,781-799,801-805 portable psy6841 113 Q15022::Polycomb protein SUZ12 ::Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXC8, HOXA9, MYT1 and CDKN2A.::Homo sapiens (taxid: 9606) confident no hit no match PF09733::VEFS-Box 100.00::34-113 GO:0031491::nucleosome binding confident no hit no match psy6842 189 Q15022::Polycomb protein SUZ12 ::Polycomb group (PcG) protein. Component of the PRC2/EED-EZH2 complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXC8, HOXA9, MYT1 and CDKN2A.::Homo sapiens (taxid: 9606) confident no hit no match PF09733::VEFS-Box 100.00::63-163 GO:0031491::nucleosome binding confident no hit no match psy9658 79 Q9NJG9::Polycomb protein Su(z)12 ::Polycomb group (PcG) protein. While PcG proteins are generally required to maintain the transcriptionally repressive state of homeotic genes throughout development, this protein is specifically required during the first 6 hours of embryogenesis to establish the repressed state. Component of the Esc/E(z) complex, which methylates 'Lys-9' (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. The Esc/E(z) complex is necessary but not sufficient for the repression of homeotic target genes, suggesting that the recruitment of the distinct PRC1 complex is also required.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09733::VEFS-Box 100.00::2-75 GO:0031491::nucleosome binding confident no hit no match psy17468 538 P55162::Membrane-associated protein Hem ::Plays a role during growth of the oocyte.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09735::Nckap1 100.00::1-535 GO:0007528::neuromuscular junction development confident hh_3p8c_B_1::1-211,214-214,218-458,460-538 very confident psy2152 205 P34609::JNK-interacting protein ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of synaptic vesicle transport, through interations with the JNK-signaling components and motor proteins. Binds specific components of the JNK signaling pathway namely jnk-1, jkk-1 and sek-1. Associates with components of the motor protein, kinesin-1. Pre-assembled unc-16 scaffolding complexes are then transported as a cargo of kinesin, to the required subcellular location.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF09744::Jnk-SapK_ap_N 100.00::23-179 GO:0008432::JUN kinase binding confident hh_2dfs_A_1::48-107,115-134 confident psy13296 101 Q9ESN9::C-Jun-amino-terminal kinase-interacting protein 3 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins.::Mus musculus (taxid: 10090) confident no hit no match PF09744::Jnk-SapK_ap_N 100.00::23-100 GO:0010468::regulation of gene expression confident hh_3swk_A_1::59-100 portable psy15587 140 Q8CIV2::Membralin ::::Mus musculus (taxid: 10090) confident no hit no match PF09746::Membralin 100.00::1-70 GO:0048190::wing disc dorsal/ventral pattern formation confident no hit no match psy6386 116 Q7Q5R5::Mediator of RNA polymerase II transcription subunit 10 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Anopheles gambiae (taxid: 7165) very confident no hit no match PF09748::Med10 100.00::10-106 GO:0016592::mediator complex confident no hit no match psy6385 137 Q7Q5R5::Mediator of RNA polymerase II transcription subunit 10 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Anopheles gambiae (taxid: 7165) very confident no hit no match PF09748::Med10 100.00::1-84 GO:0016592::mediator complex confident hh_2w9y_A_1::19-57,61-119 portable psy6754 79 Q8CFC7::CLK4-associating serine/arginine rich protein ::Probably functions as an alternative splicing regulator. May regulate the mRNA splicing of genes such as CLK1. May act by regulating members of the CLK kinase family.::Mus musculus (taxid: 10090) confident no hit no match PF09750::DRY_EERY 99.85::39-79 GO:0006397::mRNA processing confident no hit no match psy6753 79 Q8CFC7::CLK4-associating serine/arginine rich protein ::Probably functions as an alternative splicing regulator. May regulate the mRNA splicing of genes such as CLK1. May act by regulating members of the CLK kinase family.::Mus musculus (taxid: 10090) confident no hit no match PF09750::DRY_EERY 99.85::39-79 GO:0006397::mRNA processing confident no hit no match psy10788 229 Q80U30::Protein CLEC16A ::::Mus musculus (taxid: 10090) confident no hit no match PF09758::FPL 100.00::49-203 GO:0016021::integral to membrane confident rp_1vt4_I_1::8-46,49-145,148-164,166-173,183-193 portable psy9888 156 Q5R7J7::Nuclear envelope phosphatase-regulatory subunit 1 ::Forms with the serine/threonine protein phosphatase CTDNEP1 an active complex which dephosphorylates and may activate LPIN1 and LPIN2. LPIN1 and LPIN2 are phosphatidate phosphatases that catalyze the conversion of phosphatidic acid to diacylglycerol and control the metabolism of fatty acids at differents levels. May indirectly modulate the lipid composition of nuclear and/or endoplasmic reticulum membranes and be required for proper nuclear membrane morphology and/or dynamics. May also indirectly regulate the production of lipid droplets and triacylglycerol.::Pongo abelii (taxid: 9601) confident no hit no match PF09771::Tmemb_18A 100.00::34-156 GO:0071595::Nem1-Spo7 phosphatase complex confident no hit no match psy4612 112 A6QQ59::Keratinocyte-associated protein 2 ::::Bos taurus (taxid: 9913) very confident no hit no match PF09775::Keratin_assoc 100.00::1-109 GO:0008250::oligosaccharyltransferase complex confident no hit no match psy17066 192 Q02380::NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial ::Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.::Bos taurus (taxid: 9913) confident no hit no match PF09781::NDUF_B5 100.00::6-173 GO:0005747::mitochondrial respiratory chain complex I confident no hit no match psy4987 299 Q5R991::Late secretory pathway protein AVL9 homolog ::::Pongo abelii (taxid: 9601) confident no hit no match PF09794::Avl9 100.00::71-297 GO:0016477::cell migration confident hh_3tw8_A_1::86-99,108-137,140-150,152-152,154-155,163-163,171-203,208-286 confident psy3289 189 Q7JZM8::39S ribosomal protein L41, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF09809::MRP-L27 100.00::37-154 GO:0005739::mitochondrion confident no hit no match psy13292 198 P83565::39S ribosomal protein L40, mitochondrial ::::Rattus norvegicus (taxid: 10116) portable no hit no match PF09812::MRP-L28 100.00::41-172 GO:0005761::mitochondrial ribosome confident rp_1vt4_I_1::3-56,58-64,71-93,95-118,122-132,150-176 portable psy5894 233 Q96CJ1::ELL-associated factor 2 ::Acts as a transcriptional transactivator of TCEA1 elongation activity (By similarity). Acts as a transcriptional transactivator of ELL and ELL2 elongation activities. Potent inducer of apoptosis in prostatic and non-prostatic cell lines. Inhibits prostate tumor growth in vivo.::Homo sapiens (taxid: 9606) confident no hit no match PF09816::EAF 100.00::11-109 GO:0005654::nucleoplasm confident rp_1vt4_I_1::41-71,74-77,79-97,100-107,112-164 portable psy3712 109 Q5ZL16::WD repeat domain phosphoinositide-interacting protein 3 ::::Gallus gallus (taxid: 9031) confident no hit no match PF09826::Beta_propel 96.27::52-107 GO:0005829::cytosol confident hh_3vu4_A_1::1-21,24-45,52-106 very confident psy4 150 Q8WYQ3::Coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial ::::Homo sapiens (taxid: 9606) confident no hit no match PF09849::DUF2076 96.48::65-94 GO:0005739::mitochondrion confident hh_1ei0_A_1::130-150 portable psy14089 333 Q3SYZ9::Mediator of RNA polymerase II transcription subunit 4 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Bos taurus (taxid: 9913) confident no hit no match PF10018::Med4 99.94::137-266 GO:0046966::thyroid hormone receptor binding confident hh_3plt_A_1::204-211,216-226,229-229,232-251 portable psy146 253 Q9CQE8::UPF0568 protein C14orf166 homolog ::Involved in modulation of mRNA transcription by Polymerase II.::Mus musculus (taxid: 10090) confident no hit no match PF10036::RLL 100.00::5-253 GO:0000993::RNA polymerase II core binding confident hh_2igp_A_1::8-47,57-93 portable psy8909 138 Q66KB9::Biogenesis of lysosome-related organelles complex 1 subunit 2 ::May play a role in cell proliferation. May be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system. May play a role in intracellular vesicle trafficking.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF10046::BLOC1_2 100.00::37-135 GO:0008284::positive regulation of cell proliferation confident hh_2avr_X_1::48-68,72-136 confident psy8908 137 Q66KB9::Biogenesis of lysosome-related organelles complex 1 subunit 2 ::May play a role in cell proliferation. May be involved in the biogenesis of specialized organelles of the endosomal-lysosomal system. May play a role in intracellular vesicle trafficking.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF10046::BLOC1_2 100.00::37-134 GO:0008284::positive regulation of cell proliferation confident hh_2avr_X_1::48-68,72-135 confident psy5244 90 Q7QGK4::Eukaryotic translation initiation factor 3 subunit K ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) confident no hit no match PF10075::PCI_Csn8 99.55::8-72 GO:0005730::nucleolus confident hh_1rz4_A_1::4-89 very confident psy13230 132 Q23449::26S proteasome non-ATPase regulatory subunit 8 ::Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF10075::PCI_Csn8 99.90::24-131 GO:0005737::cytoplasm confident hh_4b0z_A_1::17-131 very confident psy3381 97 Q95ZJ1::Polypeptide N-acetylgalactosaminyltransferase 5 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF10111::Glyco_tranf_2_2 92.97::65-96 GO:0009312::oligosaccharide biosynthetic process confident bp_1xhb_A_1::45-74,77-96 very confident psy6071 185 Q9UKZ1::UPF0760 protein C2orf29 ::::Homo sapiens (taxid: 9606) confident no hit no match PF10155::DUF2363 99.79::126-185 GO:0030014::CCR4-NOT complex confident hh_1zoq_C_1::82-85,87-112 portable psy5791 81 Q7PVZ2::Mediator of RNA polymerase II transcription subunit 17 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Anopheles gambiae (taxid: 7165) confident no hit no match PF10156::Med17 92.96::3-37 GO:0006357::regulation of transcription from RNA polymerase II promoter confident no hit no match psy7112 319 Q6P4W7::Synembryn-A ::Guanine nucleotide exchange factor (GEF), which can activate some, but not all, G-alpha proteins by exchanging bound GDP for free GTP. Involved in regulation of microtubule pulling forces during mitotic movement of chromosomes by stimulating G(i)-alpha protein.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF10165::Ric8 100.00::153-316 GO:0005737::cytoplasm confident rp_1vt4_I_1::36-88,94-109,133-135,157-173,177-229,236-250,253-254,269-274,278-289,292-318 portable psy2822 78 O15083::ERC protein 2 ::Thought to be involved in the organization of the cytomatrix at the nerve terminals active zone (CAZ) which regulates neurotransmitter release. Seems to act together with BSN. May recruit liprin-alpha proteins to the CAZ.::Homo sapiens (taxid: 9606) portable no hit no match PF10174::Cast 99.56::1-65 GO:0048788::presynaptic cytoskeletal matrix assembled at active zones confident hh_3nmd_A_1::3-44 portable psy9670 103 Q5U2S1::NEDD4 family-interacting protein 1 ::Activates HECT domain-containing E3 ubiquitin-protein ligases, including NEDD4 and ITCH, and consequently modulates the stability of their targets. As a result, controls many cellular processes. Prevents chronic T-helper cells-mediated inflammation by activating ITCH and thus controlling JUNB degradation. In cortical neurons, mediates the ubiquitination of SLC11A2/DMT1 by NEDD4L, leading to down-regulation of the divalent metal transporter and protection of the cells from cobalt and iron toxicity. Modulates EGFR signaling through multiple pathways. In particular, may regulate the ratio of AKT1-to-MAPK8 signaling in response to EGF, acting on AKT1 probably through PTEN destabilization and on MAPK8 through ITCH-dependent MAP2K4 inactivation. As a result, may control cell growth rate.::Rattus norvegicus (taxid: 10116) portable no hit no match PF10176::DUF2370 100.00::1-98 GO:0005770::late endosome confident hh_2k21_A_1::59-96 portable psy666 102 Q7PRB8::Integrator complex subunit 3 homolog ::::Anopheles gambiae (taxid: 7165) confident no hit no match PF10189::DUF2356 100.00::10-101 GO:0005794::Golgi apparatus confident no hit no match psy7731 139 P86050::Transmembrane protein 170B ::::Mus musculus (taxid: 10090) confident no hit no match PF10190::Tmemb_170 100.00::35-139 GO:0016021::integral to membrane confident no hit no match psy15621 102 Q9W141::Putative ATP synthase subunit f, mitochondrial ::Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(0) domain. Minor subunit located with subunit a in the membrane.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF10206::WRW 100.00::1-101 GO:0005811::lipid particle very confident no hit no match psy358 176 Q9XZ63::Mesencephalic astrocyte-derived neurotrophic factor homolog ::Required during the maturation of the embryonic nervous system for maintenance of neuronal and cuticular connectivity. Essential for maintenance of dopaminergic neurons and dopamine levels.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF10208::Armet 100.00::30-176 GO:0002014::vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure confident hh_2w50_A_1::28-126 very confident psy843 109 Q9CPV3::39S ribosomal protein L42, mitochondrial ::::Mus musculus (taxid: 10090) confident no hit no match PF10210::MRP-S32 100.00::8-106 GO:0005763::mitochondrial small ribosomal subunit confident no hit no match psy842 111 Q9CPV3::39S ribosomal protein L42, mitochondrial ::::Mus musculus (taxid: 10090) confident no hit no match PF10210::MRP-S32 100.00::10-108 GO:0005763::mitochondrial small ribosomal subunit confident no hit no match psy10532 346 Q9VGG6::Putative inner dynein arm light chain, axonemal ::May play a dynamic role in flagellar motility.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10211::Ax_dynein_light 100.00::133-253 GO:0005737::cytoplasm confident no hit no match psy14602 66 B5E0H4::Protein SMG8 ::Involved in nonsense-mediated decay (NMD) of mRNAs containing premature stop codons. Probable component of kinase complex containing SMG1 and recruited to stalled ribosomes.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF10220::DUF2146 99.96::3-65 GO:0045859::regulation of protein kinase activity confident no hit no match psy14892 135 Q8QZV7::Protein asunder homolog ::Crucial regulator of the mitotic cell cycle and development.::Mus musculus (taxid: 10090) confident no hit no match PF10221::DUF2151 99.97::45-134 GO:0007346::regulation of mitotic cell cycle confident no hit no match psy5453 138 Q08BG7::Short coiled-coil protein A ::::Danio rerio (taxid: 7955) confident no hit no match PF10224::DUF2205 99.97::57-138 GO:0043025::neuronal cell body confident hh_3vmx_A_1::81-119 portable psy9706 39 Q80TE4::Signal-induced proliferation-associated 1-like protein 2 ::::Mus musculus (taxid: 10090) confident no hit no match PF10226::DUF2216 93.89::6-27 GO:0043234::protein complex confident hh_3s9g_A_1::5-30 confident psy14149 217 Q9NWY4::UPF0609 protein C4orf27 ::::Homo sapiens (taxid: 9606) confident no hit no match PF10228::DUF2228 100.00::1-215 GO:0005634::nucleus confident no hit no match psy18165 259 A1ZBT5::Mediator of RNA polymerase II transcription subunit 8 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). Required for activated transcription of the MtnA and MtnB genes.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF10232::Med8 100.00::1-259 GO:0016592::mediator complex confident hh_4h63_H_1::3-9,11-64,66-88,103-191 confident psy11904 199 Q792Q4::Cysteine-rich PDZ-binding protein ::Involved in the cytoskeletal anchoring of DLG4 in excitatory synapses.::Rattus norvegicus (taxid: 10116) confident no hit no match PF10235::Cript 100.00::65-145 GO:0043025::neuronal cell body confident hh_2fcf_A_1::2-40,42-50 portable psy4836 69 Q7Z401::C-myc promoter-binding protein ::Binds to ISRE-like element (interferon-stimulated response element) of MYC P2 promoter.::Homo sapiens (taxid: 9606) portable no hit no match PF10240::DUF2464 96.44::39-69 GO:0044464::cell part confident hh_3tow_A_1::38-49,52-69 confident psy6626 69 Q7Z401::C-myc promoter-binding protein ::Binds to ISRE-like element (interferon-stimulated response element) of MYC P2 promoter.::Homo sapiens (taxid: 9606) portable no hit no match PF10240::DUF2464 96.44::39-69 GO:0044464::cell part confident hh_3tow_A_1::38-49,52-69 confident psy11841 238 Q9CTN8::Lipoma HMGIC fusion partner-like 3 protein ::::Mus musculus (taxid: 10090) confident no hit no match PF10242::L_HGMIC_fpl 100.00::25-197 GO:0016324::apical plasma membrane confident no hit no match psy3169 163 Q29PG4::39S ribosomal protein L51, mitochondrial ::::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match PF10244::MRP-L51 100.00::60-154 GO:0006412::translation confident no hit no match psy1555 271 P82649::28S ribosomal protein S22, mitochondrial ::::Bos taurus (taxid: 9913) confident no hit no match PF10245::MRP-S22 100.00::11-256 GO:0003735::structural constituent of ribosome confident rp_1vt4_I_1::1-111,120-132,134-176,191-195,198-200,204-207,215-231 portable psy13979 78 A1XQR6::Reactive oxygen species modulator 1 ::Induces production of reactive oxygen species (ROS) which are necessary for cell proliferation. May play a role in inducing oxidative DNA damage and replicative senescence. May play a role in the coordination of mitochondrial morphology and cell proliferation.::Sus scrofa (taxid: 9823) very confident no hit no match PF10247::Romo1 100.00::12-78 GO:2000379::positive regulation of reactive oxygen species metabolic process very confident no hit no match psy10453 184 Q15773::Myeloid leukemia factor 2 ::::Homo sapiens (taxid: 9606) confident no hit no match PF10248::Mlf1IP 100.00::57-169 GO:0005705::polytene chromosome interband confident no hit no match psy11419 244 Q9V6X7::GDP-fucose protein O-fucosyltransferase 1 ::Catalyzes the reaction that attaches fucose through an O-glycosidic linkage to a conserved serine or threonine residue in EGF domains. Plays a crucial role in Notch signaling; essential for the interaction of Notch with its ligand Delta, and for the ability of Fringe to modulate this interaction.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10250::O-FucT 100.00::1-243 GO:0005112::Notch binding confident hh_3zy2_A_1::1-35,38-126,129-145,181-224,226-243 very confident psy9356 155 Q9V6X7::GDP-fucose protein O-fucosyltransferase 1 ::Catalyzes the reaction that attaches fucose through an O-glycosidic linkage to a conserved serine or threonine residue in EGF domains. Plays a crucial role in Notch signaling; essential for the interaction of Notch with its ligand Delta, and for the ability of Fringe to modulate this interaction.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10250::O-FucT 99.97::1-155 GO:0005112::Notch binding confident hh_3zy2_A_1::1-38,41-129,132-155 very confident psy9357 132 Q9V6X7::GDP-fucose protein O-fucosyltransferase 1 ::Catalyzes the reaction that attaches fucose through an O-glycosidic linkage to a conserved serine or threonine residue in EGF domains. Plays a crucial role in Notch signaling; essential for the interaction of Notch with its ligand Delta, and for the ability of Fringe to modulate this interaction.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10250::O-FucT 99.87::2-113 GO:0008417::fucosyltransferase activity confident hh_3zy2_A_1::3-41,43-120 very confident psy7404 196 Q9N0W2::Alpha-(1,6)-fucosyltransferase ::Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans.::Bos taurus (taxid: 9913) confident no hit no match PF10250::O-FucT 91.90::52-84 GO:0036065::fucosylation confident hh_2de0_X_1::1-196 very confident psy13917 135 Q9N0W2::Alpha-(1,6)-fucosyltransferase ::Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans.::Bos taurus (taxid: 9913) confident no hit no match PF10250::O-FucT 93.21::62-93 GO:0036065::fucosylation confident hh_2de0_X_1::3-127 very confident psy8981 134 Q9N0W2::Alpha-(1,6)-fucosyltransferase ::Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans.::Bos taurus (taxid: 9913) confident no hit no match PF10250::O-FucT 93.48::62-94 GO:0036065::fucosylation confident hh_2de0_X_1::3-127 very confident psy15911 131 Q3UHX2::28 kDa heat- and acid-stable phosphoprotein ::::Mus musculus (taxid: 10090) confident no hit no match PF10252::PP28 99.94::48-121 GO:0005829::cytosol confident no hit no match psy10166 104 Q92733::Proline-rich protein PRCC ::May regulate cell cycle progression through interaction with MAD2L2.::Homo sapiens (taxid: 9606) portable no hit no match PF10253::PRCC 99.85::13-102 GO:0005730::nucleolus confident no hit no match psy16397 60 A5A6M4::Eukaryotic translation initiation factor 3 subunit L ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S preinitiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of posttermination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation.::Pan troglodytes (taxid: 9598) confident no hit no match PF10255::Paf67 99.76::2-49 GO:0001650::fibrillar center confident no hit no match psy16395 157 Q7Q5Y8::Eukaryotic translation initiation factor 3 subunit L ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome.::Anopheles gambiae (taxid: 7165) confident no hit no match PF10255::Paf67 100.00::4-146 GO:0001650::fibrillar center confident hh_4b4t_R_1::25-33,38-61,77-89,110-150 confident psy2911 234 Q9D9G3::Cysteine-rich hydrophobic domain 2 protein ::::Mus musculus (taxid: 10090) confident no hit no match PF10256::Erf4 99.86::106-214 GO:0005798::Golgi-associated vesicle confident no hit no match psy4115 149 Q9D428::Golgin subfamily A member 7B ::May be involved in protein transport from Golgi to cell surface.::Mus musculus (taxid: 10090) confident no hit no match PF10256::Erf4 100.00::24-138 GO:0006893::Golgi to plasma membrane transport confident no hit no match psy17045 211 Q4V7D2::Protein rogdi homolog ::May act as a positive regulator of cell proliferation.::Rattus norvegicus (taxid: 10116) confident no hit no match PF10259::Rogdi_lz 100.00::15-210 GO:0008284::positive regulation of cell proliferation confident rp_1vt4_I_1::4-26,33-36,44-65,68-143,146-147,150-204,206-211 portable psy14832 213 Q5CZ37::FIT family protein ZK265.9 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF10261::Scs3p 100.00::87-207 GO:0005783::endoplasmic reticulum confident no hit no match psy4485 91 G3X912::SprT-like domain-containing protein Spartan ::Regulator of UV-induced DNA damage response: acts as a 'reader' of ubiquitinated PCNA that enhances RAD18-mediated PCNA ubiquitination and translesion DNA synthesis (TLS). Recruited to sites of UV damage and interacts with ubiquitinated PCNA and RAD18, the E3 ubiquitin ligase that monoubiquitinates PCNA. Facilitates chromatin association of RAD18 and is required for efficient PCNA monoubiquitination, promoting a feed-forward loop to enhance PCNA ubiquitination and translesion DNA synthesis. Acts as a regulator of TLS by recruiting VCP/p97 to sites of DNA damage, possibly leading to extraction of DNA polymerase eta (POLH) by VCP/p97 to prevent excessive translesion DNA synthesis and limit the incidence of mutations induced by DNA damage.::Mus musculus (taxid: 10090) confident no hit no match PF10263::SprT-like 99.14::17-66 GO:0031398::positive regulation of protein ubiquitination confident no hit no match psy7356 1083 Q7ZVM1::WASH complex subunit strumpellin ::::Danio rerio (taxid: 7955) confident no hit no match PF10266::Strumpellin 100.00::20-1070 GO:0071203::WASH complex confident hh_3p8c_B_1::12-52,56-64,66-68,72-75,77-118,124-153,158-196,200-203,205-256,258-296,299-331,335-367,375-375,378-380,388-424,435-445,449-449,455-513,515-521,528-559,561-564,566-587,592-630,633-696,701-726,734-753,762-861,866-868,871-883,892-901,903-947,956-961,963-966,969-977,981-1022 portable psy2570 440 Q7SY10::Transmembrane protein 161B ::::Danio rerio (taxid: 7955) portable no hit no match PF10268::Tmemb_161AB 100.00::17-439 GO:0032526::response to retinoic acid confident no hit no match psy7097 63 Q9DAK2::Parkin coregulated gene protein homolog ::Suppresses cell death induced by accumulation of unfolded Pael receptor (Pael-R, a substrate of Parkin). Facilitates the formation of inclusions consisting of Pael-R, molecular chaperones, protein degradation molecules and itself when proteasome is inhibited.::Mus musculus (taxid: 10090) confident no hit no match PF10274::ParcG 99.96::1-55 GO:0044297::cell body confident no hit no match psy7091 205 Q9DAK2::Parkin coregulated gene protein homolog ::Suppresses cell death induced by accumulation of unfolded Pael receptor (Pael-R, a substrate of Parkin). Facilitates the formation of inclusions consisting of Pael-R, molecular chaperones, protein degradation molecules and itself when proteasome is inhibited.::Mus musculus (taxid: 10090) confident no hit no match PF10274::ParcG 100.00::67-204 GO:0044297::cell body confident hh_1qgr_A_2::104-156,158-196 portable psy7090 253 Q9DAK2::Parkin coregulated gene protein homolog ::Suppresses cell death induced by accumulation of unfolded Pael receptor (Pael-R, a substrate of Parkin). Facilitates the formation of inclusions consisting of Pael-R, molecular chaperones, protein degradation molecules and itself when proteasome is inhibited.::Mus musculus (taxid: 10090) very confident no hit no match PF10274::ParcG 100.00::62-245 GO:0044297::cell body very confident hh_1qgr_A_2::100-169,173-190 portable psy1571 164 Q3TQR0::Post-GPI attachment to proteins factor 2 ::Involved in the lipid remodeling steps of GPI-anchor maturation. Required for stable expression of GPI-anchored proteins at the cell surface.::Mus musculus (taxid: 10090) confident no hit no match PF10277::Frag1 99.93::3-156 GO:0005789::endoplasmic reticulum membrane confident no hit no match psy10479 222 A0JLT2::Mediator of RNA polymerase II transcription subunit 19 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Homo sapiens (taxid: 9606) confident no hit no match PF10278::Med19 100.00::51-221 GO:0016592::mediator complex confident no hit no match psy9762 112 Q9D8C6::Mediator of RNA polymerase II transcription subunit 11 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Mus musculus (taxid: 10090) very confident no hit no match PF10280::Med11 99.97::2-106 GO:0016592::mediator complex confident hh_3r84_A_1::2-65 confident psy11046 550 Q502I9::FCH domain only protein 2 ::May function in an early step of clathrin-mediated endocytosis.::Danio rerio (taxid: 7955) confident no hit no match PF10291::muHD 100.00::281-549 GO:0030136::clathrin-coated vesicle confident hh_3g9h_A_1::279-304,307-319,323-356,365-377,392-403,408-486,488-500,502-549 very confident psy17650 396 Q0JRZ9::FCH domain only protein 2 ::Functions in an early step of clathrin-mediated endocytosis. Has both a membrane binding/bending activity and the ability to recruit proteins essential to the formation of functional clathrin-coated pits. Has a lipid-binding activity with a preference for membranes enriched in phosphatidylserine and phosphoinositides (Pi(4,5) biphosphate) like the plasma membrane. Its membrane-bending activity might be important for the subsequent action of clathrin and adaptors in the formation of clathrin-coated vesicles. Involved in adaptor protein complex AP-2-dependent endocytosis of the transferin receptor, it also functions in the AP-2-independent endocytosis of the LDL receptor.::Homo sapiens (taxid: 9606) portable no hit no match PF10291::muHD 99.53::324-395 GO:0044464::cell part confident hh_2v0o_A_1::1-166,168-198 very confident psy4506 83 Q4LBB6::Octopamine receptor beta-3R ::Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10320::7TM_GPCR_Srsx 97.18::27-63 GO:0004989::octopamine receptor activity confident hh_3uon_A_1::25-68 very confident psy9050 73 Q4LBB6::Octopamine receptor beta-3R ::Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10324::7TM_GPCR_Srw 97.52::18-56 GO:0004989::octopamine receptor activity confident hh_3pbl_A_1::11-58 very confident psy2989 66 no hit no match no hit no match PF10324::7TM_GPCR_Srw 98.93::1-66 GO:0008188::neuropeptide receptor activity confident hh_2ks9_A_1::2-28,32-40,45-66 confident psy2988 184 no hit no match no hit no match PF10324::7TM_GPCR_Srw 99.60::21-154 GO:0008188::neuropeptide receptor activity confident hh_4amj_A_1::22-105,113-137,139-156 confident psy12079 65 Q90WY5::Alpha-2B adrenergic receptor ::Alpha-2 adrenergic receptors mediate the catecholamine-induced inhibition of adenylate cyclase through the action of G proteins. The order of potency for this receptor is norepinephrine > epinephrine.::Danio rerio (taxid: 7955) confident no hit no match PF10324::7TM_GPCR_Srw 97.10::13-52 GO:0071883::activation of MAPK activity by adrenergic receptor signaling pathway confident hh_2rh1_A_1::9-36,38-54 very confident psy6420 169 Q69ZW3::EH domain-binding protein 1 ::May play a role in actin reorganization. Links clathrin-mediated endocytosis to the actin cytoskeleton.::Mus musculus (taxid: 10090) portable no hit no match PF10358::NT-C2 99.39::21-107 GO:0005737::cytoplasm confident rp_1vt4_I_1::6-18,20-60,64-67,72-77,87-90,94-97,106-137,141-162,168-169 portable psy6412 181 Q69ZW3::EH domain-binding protein 1 ::May play a role in actin reorganization. Links clathrin-mediated endocytosis to the actin cytoskeleton.::Mus musculus (taxid: 10090) confident no hit no match PF10358::NT-C2 99.94::12-164 GO:0031941::filamentous actin confident no hit no match psy10139 106 O00472::RNA polymerase II elongation factor ELL2 ::Elongation factor that can increase the catalytic rate of RNA polymerase II transcription by suppressing transient pausing by the polymerase at multiple sites along the DNA.::Homo sapiens (taxid: 9606) portable no hit no match PF10390::ELL 100.00::2-86 GO:0005700::polytene chromosome confident hh_2e5n_A_1::2-80 very confident psy3598 175 Q7Z7C8::Transcription initiation factor TFIID subunit 8 ::Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. Mediates both basal and activator-dependent transcription. Plays a role in the differentiation of preadipocyte fibroblasts to adipocytes, however, does not seem to play a role in differentiation of myoblasts. Required for the integration of TAF10 in the TAF complex. May be important for survival of cells of the inner cell mass which constitute the pluripotent cell population of the early embryo.::Homo sapiens (taxid: 9606) portable no hit no match PF10406::TAF8_C 99.64::8-53 GO:0006367::transcription initiation from RNA polymerase II promoter confident no hit no match psy3694 61 Q15393::Splicing factor 3B subunit 3 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Homo sapiens (taxid: 9606) confident no hit no match PF10433::MMS1_N 99.61::1-60 GO:0071013::catalytic step 2 spliceosome confident hh_3ei3_A_1::1-31,33-60 confident psy14554 78 Q15393::Splicing factor 3B subunit 3 ::Subunit of the splicing factor SF3B required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex. Belongs also to the minor U12-dependent spliceosome, which is involved in the splicing of rare class of nuclear pre-mRNA intron.::Homo sapiens (taxid: 9606) confident no hit no match PF10433::MMS1_N 97.14::11-77 GO:0071013::catalytic step 2 spliceosome confident hh_3ei3_A_1::11-30,54-77 confident psy14114 248 Q32LM0::Endophilin-B1 ::May be required for normal outer mitochondrial membrane dynamics. Required for coatomer-mediated retrograde transport in certain cells. May recruit other proteins to membranes with high curvature. May promote membrane fusion.::Bos taurus (taxid: 9913) confident no hit no match PF10455::BAR_2 100.00::9-248 GO:0043234::protein complex confident hh_1zww_A_1::6-175,185-247 very confident psy15859 175 P34748::Uncharacterized protein ZK1098.7 ::::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF10484::MRP-S23 100.00::2-129 GO:0005739::mitochondrion confident no hit no match psy16002 229 no hit no match no hit no match PF10506::MCC-bdg_PDZ 98.95::131-198 GO:0031941::filamentous actin confident hh_2v71_A_1::79-120,124-167,172-200 portable psy10039 450 Q9VFS5::Serine/threonine-protein phosphatase 4 regulatory subunit 3 ::Regulatory subunit of serine/threonine-protein phosphatase 4. The probable PP4 complex Pp4-19C-PPP4R2r-flfl (PPP4C-PPP4R2-PPP4R3) is required to prevent caspase induced cell death (in vitro). May be involved in DNA damage repair. Key mediator specific for the localization of mira and associated cell fate determinants during both interphase and mitosis. Nuclear Flfl is required to exclude mira/pros from the nucleus when inefficiently bound to the cytoskeleton/cortex, whereas cytosolic or membrane-associated flfl is required for the cortical association and asymmetric localization of mira/pros/brat/stau at metaphase and anaphase.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10508::Proteasom_PSMB 96.83::51-292 GO:0030289::protein phosphatase 4 complex confident hh_2z6h_A_1::6-13,16-38,50-87,89-96,108-122,125-142,144-144,148-157,161-174,186-208,211-246,249-271,274-289 portable psy4702 138 O74994::Ring assembly protein 3 ::Essential for actinomyosin ring assembly during cytokinesis. Has a role, in conjunction with F-actin, in assembling myosin II-containing proteins, such as myo2, at the division site.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF10508::Proteasom_PSMB 97.16::9-130 GO:0061077::chaperone-mediated protein folding confident hh_3now_A_1::10-136 very confident psy185 95 no hit no match no hit no match PF10517::DM13 99.64::41-94 GO:0008293::torso signaling pathway confident no hit no match psy16970 257 Q9GPJ1::Protein Skeletor, isoforms D/E ::Provides structural support to stabilize and organize the microtubule spindle during mitosis (within embryonic somatic cells) and meiosis (within spermatocytes). The role in mitosis regulation depends on the Ran pathway.::Drosophila melanogaster (taxid: 7227) portable no hit no match PF10517::DM13 99.94::137-237 GO:0016363::nuclear matrix confident hh_3hot_A_1::10-33,40-76,92-130 confident psy12064 148 O14795::Protein unc-13 homolog B ::Plays a role in vesicle maturation during exocytosis as a target of the diacylglycerol second messenger pathway. Is involved in neurotransmitter release by acting in synaptic vesicle priming prior to vesicle fusion and participates in the activity-depending refilling of readily releasable vesicle pool (RRP). Essential for synaptic vesicle maturation in a subset of excitatory/glutamatergic but not inhibitory/GABA-mediated synapses.::Homo sapiens (taxid: 9606) confident no hit no match PF10540::Membr_traf_MHD 99.91::2-63 GO:0043234::protein complex confident hh_3swh_A_1::2-69 very confident psy15974 165 Q6PCS6::Mitochondrial fission process protein 1 ::Involved in the mitochondrial division probably by regulating membrane fission. Loss-of-function leads to apoptosis.::Danio rerio (taxid: 7955) confident no hit no match PF10558::MTP18 100.00::18-148 GO:0000266::mitochondrial fission confident no hit no match psy13438 154 Q03391::Glutamate receptor ionotropic, NMDA 2D ::NMDA receptor subtype of glutamate-gated ion channels possesses high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine.::Mus musculus (taxid: 10090) portable no hit no match PF10613::Lig_chan-Glu_bd 99.69::117-153 GO:0035235::ionotropic glutamate receptor signaling pathway confident hh_1pb7_A_1::59-79,81-99,101-101,106-108,110-110,112-152 very confident psy14119 90 Q8MSF5::Ribonuclease kappa ::Endoribonuclease.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10853::DUF2650 96.23::2-29 GO:0004521::endoribonuclease activity confident no hit no match psy10100 65 Q8MSF5::Ribonuclease kappa ::Endoribonuclease.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF10853::DUF2650 96.59::2-29 GO:0004521::endoribonuclease activity confident no hit no match psy1603 175 P80233::Cuticle protein 67, isoform B ::Component of the cuticle of migratory locust which contains more than 100 different structural proteins.::Locusta migratoria (taxid: 7004) portable no hit no match PF11018::Cuticle_3 100.00::32-175 GO:0005615::extracellular space confident no hit no match psy6853 154 Q9VZH1::Uncharacterized protein C21orf59 homolog ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF11069::DUF2870 100.00::52-149 GO:0005829::cytosol confident hh_1sif_A_1::20-36,44-71,73-89 portable psy1643 962 Q13503::Mediator of RNA polymerase II transcription subunit 21 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Homo sapiens (taxid: 9606) confident no hit no match PF11221::Med21 100.00::825-954 GO:0003713::transcription coactivator activity confident hh_1yke_B_1::825-837,840-961 very confident psy5765 205 O94913::Pre-mRNA cleavage complex 2 protein Pcf11 ::Component of pre-mRNA cleavage complex II.::Homo sapiens (taxid: 9606) portable no hit no match PF11259::DUF3060 93.05::105-154 GO:0071230::cellular response to amino acid stimulus confident no hit no match psy13866 201 Q9VSF2::Mediator of RNA polymerase II transcription subunit 24 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Required for activated transcription of the MtnA, MtnB and MtnD genes.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF11277::Med24_N 100.00::1-201 GO:0044763::single-organism cellular process confident no hit no match psy9076 61 Q9W0P3::Mediator of RNA polymerase II transcription subunit 30 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF11315::Med30 99.95::1-60 GO:0016592::mediator complex confident no hit no match psy4946 165 O70585::Dystrobrevin beta ::::Mus musculus (taxid: 10090) confident no hit no match PF11365::DUF3166 93.43::71-140 GO:0043234::protein complex confident hh_3a7p_A_1::70-102,109-142,146-152 portable psy4518 376 Q80Y56::Rabenosyn-5 ::Rab4/Rab5 effector protein acting in early endocytic membrane fusion and membrane trafficking of recycling endosomes. Required for endosome fusion either homotypically or with clathrin coated vesicles. Plays a role in the lysosomal trafficking of CTSD/cathepsin D from the Golgi to lysosomes. Also promotes the recycling of transferrin directly from early endosomes to the plasma membrane. Binds phospholipid vesicles containing phosphatidylinositol 3-phosphate (PtdInsP3).::Mus musculus (taxid: 10090) portable no hit no match PF11464::Rbsn 99.71::322-363 GO:0005769::early endosome confident hh_1z2q_A_1::51-102,114-129 very confident psy6849 439 Q9Y3E1::Hepatoma-derived growth factor-related protein 3 ::Enhances DNA synthesis and may play a role in cell proliferation.::Homo sapiens (taxid: 9606) portable no hit no match PF11467::LEDGF 100.00::299-420 GO:0044424::intracellular part confident hh_1z9e_A_1::296-359,378-413 very confident psy17340 200 O88485::Cytoplasmic dynein 1 intermediate chain 1 ::Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. The intermediate chains mediate the binding of dynein to dynactin via its 150 kDa component (p150-glued) DCNT1. May play a role in mediating the interaction of cytoplasmic dynein with membranous organelles and kinetochores.::Mus musculus (taxid: 10090) portable no hit no match PF11540::Dynein_IC2 98.86::24-54 GO:0005875::microtubule associated complex confident hh_3l9k_W_1::151-188 very confident psy5720 153 Q61768::Kinesin-1 heavy chain ::Microtubule-dependent motor required for normal distribution of mitochondria and lysosomes. May be involved in the mechanisms of growth arrest induced by exposure to DNA-damaging drugs or by cellular senescence.::Mus musculus (taxid: 10090) confident no hit no match PF11559::ADIP 96.62::20-96 GO:0035371::microtubule plus end very confident hh_1c1g_A_1::18-76 portable psy13096 244 no hit no match no hit no match PF11581::Argos 99.95::112-199 GO:0005576::extracellular region confident hh_3c9a_A_1::58-97,100-116,124-151,153-153,155-174,177-189,191-199 very confident psy15424 153 Q71F56::Mediator of RNA polymerase II transcription subunit 13-like ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. This subunit may specifically regulate transcription of targets of the Wnt signaling pathway and SHH signaling pathway.::Homo sapiens (taxid: 9606) portable no hit no match PF11597::Med13_N 99.92::39-149 GO:0006357::regulation of transcription from RNA polymerase II promoter confident no hit no match psy11430 181 Q61188::Histone-lysine N-methyltransferase EZH2 ::Polycomb group (PcG) protein. Catalytic subunit of the PRC2/EED-EZH2 complex, which methylates (H3K9me) and 'Lys-27' (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. Able to mono-, di- and trimethylate 'Lys-27' of histone H3 to form H3K27me1, H3K27me2 and H3K27me3, respectively. Compared to EZH2-containing complexes, it is more abundant in embryonic stem cells and plays a major role in forming H3K27me3, which is required for embryonic stem cell identity and proper differentiation. The PRC2/EED-EZH2 complex may also serve as a recruiting platform for DNA methyltransferases, thereby linking two epigenetic repression systems. Genes repressed by the PRC2/EED-EZH2 complex include HOXA7, HOXB6 and HOXC8. EZH2 can also methylate non-histone proteins such as the transcription factor GATA4.::Mus musculus (taxid: 10090) portable no hit no match PF11616::EZH2_WD-Binding 98.81::32-61 GO:0046974::histone methyltransferase activity (H3-K9 specific) confident hh_2qxv_B_1::32-61 portable psy17735 96 Q9VKJ9::Coiled-coil and C2 domain-containing protein 1-like ::Negative regulator of the Notch signaling pathway, acting to restrict the activity of Notch to the dorsoventral (D/V) boundary of the wing imaginal disk. Also causes negative regulation of Notch during vein, eye, and bristle development. Acts by targeting Notch for endosomal degradation or recycling.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF11618::DUF3250 95.55::19-76 GO:0005543::phospholipid binding confident hh_2dmg_A_1::6-65 confident psy7536 265 P18583::Protein SON ::RNA-binding protein that acts as a mRNA splicing cofactor by promoting efficient splicing of transcripts that posses weak splice sites. Specifically promotes splicing of many cell-cycle and DNA-repair transcripts that posses weak splice sites, such as TUBG1, KATNB1, TUBGCP2, AURKB, PCNT, AKT1, RAD23A, and FANCG. Probably acts by facilitating the interaction between Serine/arginine-rich proteins such as SRSF2 and the RNA polymerase II. Also binds to DNA; binds to the consensus DNA sequence: 5'-GA[GT]AN[CG][AG]CC-3'. May indirectly repress hepatitis B virus (HBV) core promoter activity and transcription of HBV genes and production of HBV virions.::Homo sapiens (taxid: 9606) portable no hit no match PF11691::DUF3288 91.97::40-104 GO:0044428::nuclear part confident rp_1vt4_I_1::32-50,54-58,64-98,100-118,121-137,139-218,222-233 portable psy4706 163 Q9H3U1::Protein unc-45 homolog A ::Acts as co-chaperone for HSP90. Prevents the stimulation of HSP90AB1 ATPase activity by AHSA1. Positive factor in promoting PGR function in the cell. May be necessary for proper folding of myosin (Potential). Necessary for normal cell proliferation. Necessary for normal myotube formation and myosin accumulation during muscle cell development. May play a role in erythropoiesis in stroma cells in the spleen.::Homo sapiens (taxid: 9606) portable no hit no match PF11701::UNC45-central 99.81::60-161 GO:0034605::cellular response to heat confident hh_3now_A_1::4-161 very confident psy4701 124 Q9H3U1::Protein unc-45 homolog A ::Acts as co-chaperone for HSP90. Prevents the stimulation of HSP90AB1 ATPase activity by AHSA1. Positive factor in promoting PGR function in the cell. May be necessary for proper folding of myosin (Potential). Necessary for normal cell proliferation. Necessary for normal myotube formation and myosin accumulation during muscle cell development. May play a role in erythropoiesis in stroma cells in the spleen.::Homo sapiens (taxid: 9606) confident no hit no match PF11701::UNC45-central 97.62::77-123 GO:0061077::chaperone-mediated protein folding confident hh_3now_A_1::2-120 very confident psy4218 520 Q5U3F2::Pre-mRNA-splicing factor SLU7 ::Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Required for holding exon 1 properly in the spliceosome and for correct AG identification when more than one possible AG exists in 3'-splicing site region.::Danio rerio (taxid: 7955) very confident no hit no match PF11708::Slu7 100.00::158-401 GO:0030532::small nuclear ribonucleoprotein complex confident hh_1nc8_A_1::115-133,135-139 portable psy7979 186 Q3KNV8::Polycomb group RING finger protein 3 ::Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility.::Homo sapiens (taxid: 9606) confident no hit no match PF11816::DUF3337 98.27::92-182 GO:0031323::regulation of cellular metabolic process confident hh_2ckl_A_1::11-67 confident psy5269 190 Q11011::Puromycin-sensitive aminopeptidase ::Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins.::Mus musculus (taxid: 10090) portable no hit no match PF11838::ERAP1_C 99.96::3-178 GO:0044444::cytoplasmic part confident hh_3rjo_A_1::3-37,48-79,82-139,142-178 very confident psy1379 446 Q8BPU7::Engulfment and cell motility protein 1 ::Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.::Mus musculus (taxid: 10090) portable no hit no match PF11841::DUF3361 100.00::287-439 GO:0044424::intracellular part confident hh_3dad_A_2::1-16,18-37,42-65,69-130,132-132,135-153 confident psy12239 785 Q8C079::Striatin-interacting protein 1 ::Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the cortical actin filament dynamics and cell shape.::Mus musculus (taxid: 10090) very confident no hit no match PF11882::DUF3402 100.00::366-764 GO:0005634::nucleus confident rp_1vt4_I_1::263-275,282-337,339-342,345-349,369-385,387-389,395-476,481-498,503-511,515-520,525-539,546-580,584-588,596-601,606-698,717-729,734-780 portable psy17724 128 no hit no match no hit no match PF11901::DUF3421 99.94::31-122 GO:0005737::cytoplasm confident hh_2bjr_A_1::59-81,85-128 portable psy4692 162 Q9VBX1::Nuclear export mediator factor NEMF homolog ::Plays a role in regulating nuclear transport possibly through directly binding to both emb and cargo proteins.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF11923::DUF3441 100.00::59-152 GO:0051168::nuclear export confident no hit no match psy826 329 Q7SXF6::Cysteine-rich with EGF-like domain protein 2 ::Possible role in neuronal acetylcholine receptor transport.::Danio rerio (taxid: 7955) confident no hit no match PF11938::DUF3456 98.89::2-93 GO:0005794::Golgi apparatus confident hh_2bou_A_1::110-120,127-142,146-146,153-166,169-179,181-222,242-259 very confident psy1980 100 Q8BH43::Wiskott-Aldrich syndrome protein family member 2 ::Downstream effector molecule involved in the transmission of signals from tyrosine kinase receptors and small GTPases to the actin cytoskeleton. Promotes formation of actin filaments. Part of the WAVE complex that regulates lamellipodia formation. The WAVE complex regulates actin filament reorganization via its interaction with the Arp2/3 complex.::Mus musculus (taxid: 10090) portable no hit no match PF11945::WASH_WAHD 96.85::40-97 GO:0030027::lamellipodium confident hh_3p8c_D_1::1-16,18-22,29-99 very confident psy10508 555 Q8R3N6::THO complex subunit 1 ::Regulates transcriptional elongation of a subset of genes. Participates in an apoptotic pathway which is characterized by activation of caspase-6, increases in the expression of BAK1 and BCL2L1 and activation of NF-kappa-B. This pathway does not require p53/TP53, nor does the presence of p53/TP53 affect the efficiency of cell killing. Activates a G2/M cell cycle checkpoint prior to the onset of apoptosis. Apoptosis is inhibited by association with RB1 (By similarity). Essential for early embryonic development. Required for normal gene expression during postnatal testis development.::Mus musculus (taxid: 10090) confident no hit no match PF11957::efThoc1 100.00::57-491 GO:0005634::nucleus confident rp_1vt4_I_1::2-10,14-39,43-45,55-79,82-116,119-163,167-202,211-218,239-254,259-292,301-310,314-332,335-380,384-441,456-470 portable psy6309 134 A2A288::Probable ribonuclease ZC3H12D ::May regulate cell growth likely by suppressing RB1 phosphorylation. May function as RNase and regulate the levels of target RNA species (Potential). Serve as a tumor suppressor in certain leukemia cells. Overexpression inhibits the G1 to S phase progression through suppression of RB1 phosphorylation.::Homo sapiens (taxid: 9606) confident no hit no match PF11977::RNase_Zc3h12a 100.00::4-130 GO:0032720::negative regulation of tumor necrosis factor production confident hh_3v33_A_1::2-133 very confident psy10457 508 Q9C0D7::Probable ribonuclease ZC3H12C ::May function as RNase and regulate the levels of target RNA species.::Homo sapiens (taxid: 9606) confident no hit no match PF11977::RNase_Zc3h12a 100.00::113-269 GO:2000134::negative regulation of G1/S transition of mitotic cell cycle confident hh_3v33_A_1::108-312 very confident psy17041 202 no hit no match no hit no match PF12051::DUF3533 96.72::103-138 GO:0005886::plasma membrane confident hh_3cni_A_1::101-132 portable psy812 332 P52849::Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 ::Essential bifunctional enzyme that catalyzes both the N-deacetylation and the N-sulfation of glucosamine (GlcNAc) of the glycosaminoglycan in heparan sulfate. Modifies the GlcNAc-GlcA dissacharide repeating sugar backbone to make N-sulfated heparosan, a prerequisite substrate for later modifications in heparin biosynthesis. Plays a role in determining the extent and pattern of sulfation of heparan sulfate.::Homo sapiens (taxid: 9606) confident no hit no match PF12062::HSNSD 100.00::3-93 GO:0019213::deacetylase activity confident hh_1nst_A_1::83-314,316-330 very confident psy12465 434 Q9V3L1::Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase ::Essential bifunctional enzyme that catalyzes both the N-deacetylation and the N-sulfation of glucosamine (GlcNAc) of the glycosaminoglycan in heparan sulfate. Modifies the GlcNAc-GlcA dissacharide repeating sugar backbone to make N-sulfated heparosan, a prerequisite substrate for later modifications in heparin biosynthesis. Plays a role in diffusion of morphogen wingless (wg) via its role in heparan sulfate proteoglycans (HSPGs) biosynthesis, HSPGs being required for movement of wg morphogens. Required for wg signaling during both embryonic and imaginal disk development. Also required for FGF receptor signaling.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF12062::HSNSD 100.00::1-384 GO:0019213::deacetylase activity confident no hit no match psy8034 73 Q9V3L1::Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase ::Essential bifunctional enzyme that catalyzes both the N-deacetylation and the N-sulfation of glucosamine (GlcNAc) of the glycosaminoglycan in heparan sulfate. Modifies the GlcNAc-GlcA dissacharide repeating sugar backbone to make N-sulfated heparosan, a prerequisite substrate for later modifications in heparin biosynthesis. Plays a role in diffusion of morphogen wingless (wg) via its role in heparan sulfate proteoglycans (HSPGs) biosynthesis, HSPGs being required for movement of wg morphogens. Required for wg signaling during both embryonic and imaginal disk development. Also required for FGF receptor signaling.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF12062::HSNSD 100.00::3-73 GO:0019213::deacetylase activity confident no hit no match psy583 293 Q9UPN9::E3 ubiquitin-protein ligase TRIM33 ::Acts as an E3 ubiquitin-protein ligase. Promotes SMAD4 ubiquitination, nuclear exclusion and degradation via the ubiquitin proteasome pathway. According to PubMed:16751102, does not promote a decrease in the level of endogenous SMAD4. May act as a transcriptional repressor. Inhibits the transcriptional response to TGF-beta/BMP signaling cascade. Plays a role in the control of cell proliferation. Its association with SMAD2 and SMAD3 stimulates erythroid differentiation of hematopoietic stem/progenitor (By similarity). Monoubiquitinates SMAD4 and acts as an inhibitor of SMAD4-dependent TGF-beta/BMP signaling cascade (Monoubiquitination of SMAD4 hampers its ability to form a stable complex with activated SMAD2/3 resulting in inhibition of TGF-beta/BMP signaling cascade).::Homo sapiens (taxid: 9606) portable no hit no match PF12126::DUF3583 98.33::134-248 GO:0003682::chromatin binding confident hh_2d8u_A_1::83-113,115-131 portable psy11969 170 Q9C026::E3 ubiquitin-protein ligase TRIM9 ::E3 ubiquitin-protein ligase which ubiquitinates itself in cooperation with an E2 enzyme UBE2D2/UBC4 and serves as a targeting signal for proteasomal degradation. May play a role in regulation of neuronal functions and may also participate in the formation or breakdown of abnormal inclusions in neurodegenerative disorders. May act as a regulator of synaptic vesicle exocytosis by controlling the availability of SNAP25 for the SNARE complex formation.::Homo sapiens (taxid: 9606) portable no hit no match PF12126::DUF3583 95.94::79-160 GO:0043232::intracellular non-membrane-bounded organelle confident hh_2d8u_A_1::41-63 portable psy3838 74 Q9V9A8::Putative homeodomain transcription factor ::May play a role in transcription regulation.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF12129::Phtf-FEM1B_bdg 100.00::8-74 GO:0005783::endoplasmic reticulum confident no hit no match psy235 226 Q9NSY0::Nuclear receptor-binding protein 2 ::May regulate apoptosis of neural progenitor cells during their differentiation.::Homo sapiens (taxid: 9606) portable no hit no match PF12202::OSR1_C 91.07::163-191 GO:0005829::cytosol confident hh_3com_A_1::22-61 confident psy13626 127 Q14161::ARF GTPase-activating protein GIT2 ::GTPase-activating protein for the ADP ribosylation factor family.::Homo sapiens (taxid: 9606) portable no hit no match PF12205::GIT1_C 100.00::17-127 GO:0044424::intracellular part confident hh_2jx0_A_1::12-47,49-127 very confident psy13624 187 Q9JLQ2::ARF GTPase-activating protein GIT2 ::GTPase-activating protein for the ADP ribosylation factor family.::Mus musculus (taxid: 10090) portable no hit no match PF12205::GIT1_C 100.00::77-187 GO:0044424::intracellular part confident hh_2jx0_A_1::77-109,111-187 very confident psy9160 297 Q0V8S0::Hepatocyte growth factor-regulated tyrosine kinase substrate ::Involved in intracellular signal transduction mediated by cytokines and growth factors. When associated with STAM it suppresses DNA signaling upon stimulation by IL-2 and GM-CSF. Could be a direct effector of PI3-kinase in vesicular pathway via early endosomes and may regulate trafficking to early and late endosomes by recruiting clathrin. May concentrate ubiquitinated receptors within clathrin-coated regions. Involved in down-regulation of receptor tyrosine kinase via multivesicular body (MVBs) when complexed with STAM (ESCRT-0 complex). The ESCRT-0 complex binds ubiquitin and acts as sorting machinery that recognizes ubiquitinated receptors and transfers them to further sequential lysosomal sorting/trafficking processes. May contribute to the efficient recruitment of SMADs to the activin receptor complex. Involved in receptor recycling via its association with the CART complex, a multiprotein complex required for efficient transferrin receptor recycling but not for EGFR degradation.::Bos taurus (taxid: 9913) portable no hit no match PF12210::Hrs_helical 100.00::143-238 GO:0005829::cytosol confident hh_3f1i_H_1::141-238 very confident psy10054 910 A2VDN6::Splicing factor 3A subunit 1 ::Subunit of the splicing factor SF3A required for 'A' complex assembly formed by the stable binding of U2 snRNP to the branchpoint sequence (BPS) in pre-mRNA. Sequence independent binding of SF3A/SF3B complex upstream of the branch site is essential, it may anchor U2 snRNP to the pre-mRNA. May also be involved in the assembly of the 'E' complex.::Bos taurus (taxid: 9913) confident no hit no match PF12230::PRP21_like_P 100.00::200-501 GO:0005634::nucleus confident hh_4dgw_B_1::136-157,159-168,170-201,208-269,271-290 very confident psy2928 744 P59114::Phosphorylated CTD-interacting factor 1 ::May play a role in transcription elongation or in coupling transcription to pre-mRNA processing through its association with the phosphorylated C-terminal domain (CTD) of RNAPII largest subunit.::Mus musculus (taxid: 10090) confident no hit no match PF12237::PCIF1_WW 100.00::506-665 GO:0010923::negative regulation of phosphatase activity confident hh_2jx8_A_1::81-130 very confident psy12992 319 no hit no match no hit no match PF12273::RCR 95.97::153-188 GO:0030446::hyphal cell wall confident no hit no match psy17744 326 Q9DB07::Intraflagellar transport protein 46 homolog ::Forms part of a complex involved in intraflagellar transport (IFT), the bi-directional movement of particles required for the assembly, maintenance and functioning of primary cilia. May play a role in chondrocyte maturation and skeletogenesis.::Mus musculus (taxid: 10090) confident no hit no match PF12317::IFT46_B_C 100.00::94-307 GO:0043234::protein complex confident rp_1qzv_F_1::118-119,123-143,145-150 portable psy1102 138 Q04338::t-SNARE VTI1 ::t-SNARE found in various SNARE complexes involved in multiple transport pathways. The composition of the t-SNARE complexes is specific for a limited number of v-SNAREs and therefore allows only the vesicles carrying the matching v-SNARE to fuse.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF12352::V-SNARE_C 99.48::53-116 GO:0005794::Golgi apparatus confident hh_2nps_C_1::43-103,105-117 very confident psy489 99 Q04338::t-SNARE VTI1 ::t-SNARE found in various SNARE complexes involved in multiple transport pathways. The composition of the t-SNARE complexes is specific for a limited number of v-SNAREs and therefore allows only the vesicles carrying the matching v-SNARE to fuse.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match PF12352::V-SNARE_C 99.16::51-98 GO:0043231::intracellular membrane-bounded organelle confident hh_2nps_C_1::41-98 very confident psy7944 231 Q12756::Kinesin-like protein KIF1A ::Motor for anterograde axonal transport of synaptic vesicle precursors.::Homo sapiens (taxid: 9606) confident no hit no match PF12423::KIF1B 99.37::40-86 GO:0043025::neuronal cell body confident hh_2hje_A_1::99-122 portable psy7271 305 no hit no match no hit no match PF12423::KIF1B 99.05::1-42 GO:0044464::cell part confident no hit no match psy6416 193 A6NKF9::Putative Golgi pH regulator C ::::Homo sapiens (taxid: 9606) confident no hit no match PF12430::ABA_GPCR 100.00::72-177 GO:0030660::Golgi-associated vesicle membrane confident no hit no match psy14469 482 B2ZXD5::Golgi pH regulator ::Voltage dependent anion channel required for acidification and functions of the Golgi apparatus that may function in counter-ion conductance.::Cricetulus griseus (taxid: 10029) confident no hit no match PF12430::ABA_GPCR 100.00::264-431 GO:0030660::Golgi-associated vesicle membrane confident no hit no match psy6422 182 B2ZXD5::Golgi pH regulator ::Voltage dependent anion channel required for acidification and functions of the Golgi apparatus that may function in counter-ion conductance.::Cricetulus griseus (taxid: 10029) confident no hit no match PF12430::ABA_GPCR 99.97::5-110 GO:0030660::Golgi-associated vesicle membrane confident no hit no match psy7273 413 no hit no match no hit no match PF12473::DUF3694 100.00::239-374 GO:0007528::neuromuscular junction development confident hh_2yrb_A_1::154-163,165-190,192-193,195-198,200-202,206-238 portable psy14285 443 Q9EQW7::Kinesin-like protein KIF13A ::Plus end-directed microtubule-dependent motor protein involved in intracellular transport and regulating various processes such as mannose-6-phosphate receptor (M6PR) transport to the plasma membrane, endosomal sorting during melanosome biogenesis and cytokinesis. During melanosome maturation, required for delivering melanogenic enzymes from recycling endosomes to nascent melanosomes by creating peripheral recycling endosomal subdomains in melanocytes. Also required for the abcission step in cytokinesis: mediates translocation of ZFYVE26, and possibly TTC19, to the midbody during cytokinesis (By similarity). Mediates the transport of M6PR-containing vesicles from trans-Golgi network to the plasma membrane via direct interaction with the AP-1 complex.::Mus musculus (taxid: 10090) confident no hit no match PF12473::DUF3694 99.80::165-226 GO:0030496::midbody confident rp_1vt4_I_1::81-95,97-136,139-159,161-172,175-205,208-254,258-345,347-347,349-384,398-402,404-406,411-414,417-442 portable psy338 72 Q5F2E8::Serine/threonine-protein kinase TAO1 ::Serine/threonine-protein kinase involved in various processes such as p38/MAPK14 stress-activated MAPK cascade, DNA damage response and regulation of cytoskeleton stability. Phosphorylates MAP2K3, MAP2K6 and MARK2. Acts as an activator of the p38/MAPK14 stress-activated MAPK cascade by mediating phosphorylation and subsequent activation of the upstream MAP2K3 and MAP2K6 kinases. Involved in G-protein coupled receptor signaling to p38/MAPK14. In response to DNA damage, involved in the G2/M transition DNA damage checkpoint by activating the p38/MAPK14 stress-activated MAPK cascade, probably by mediating phosphorylation of MAP2K3 and MAP2K6. Acts as a regulator of cytoskeleton stability by phosphorylating 'Thr-208' of MARK2, leading to activate MARK2 kinase activity and subsequent phosphorylation and detachment of MAPT/TAU from microtubules. Also acts as a regulator of apoptosis: regulates apoptotic morphological changes, including cell contraction, membrane blebbing and apoptotic bodies formation via activation of the MAPK8/JNK cascade.::Mus musculus (taxid: 10090) confident no hit no match PF12474::PKK 94.09::15-68 GO:0006915::apoptotic process confident no hit no match psy15404 244 O08815::STE20-like serine/threonine-protein kinase ::Mediates apoptosis and actin stress fiber dissolution.::Rattus norvegicus (taxid: 10116) confident no hit no match PF12474::PKK 100.00::74-217 GO:0044464::cell part confident hh_1jad_A_1::182-218,220-236 portable psy12208 392 O08815::STE20-like serine/threonine-protein kinase ::Mediates apoptosis and actin stress fiber dissolution.::Rattus norvegicus (taxid: 10116) portable no hit no match PF12474::PKK 99.87::287-388 GO:0044763::single-organism cellular process confident rp_1i84_S_2::27-248,250-270,275-363 portable psy17955 547 Q53UA7::Serine/threonine-protein kinase TAO3 ::Serine/threonine-protein kinase that acts as a regulator of the p38/MAPK14 stress-activated MAPK cascade and of the MAPK8/JNK cascade. Acts as an activator of the p38/MAPK14 stress-activated MAPK cascade. In response to DNA damage, involved in the G2/M transition DNA damage checkpoint by activating the p38/MAPK14 stress-activated MAPK cascade, probably by mediating phosphorylation of upstream MAP2K3 and MAP2K6 kinases. Inhibits basal activity of MAPK8/JNK cascade and diminishes its activation in response epidermal growth factor (EGF).::Rattus norvegicus (taxid: 10116) portable no hit no match PF12474::PKK 97.17::130-212 GO:0050794::regulation of cellular process confident hh_1jad_A_1::155-216 portable psy12863 150 Q5QQ57::Xylosyltransferase 1 ::Catalyzes the first step in biosynthesis of glycosaminoglycan. Transfers D-xylose from UDP-D-xylose to specific serine residues of the core protein. Initial enzyme in the biosynthesis of chondroitin sulfate and dermatan sulfate proteoglycans in fibroblasts and chondrocytes.::Pan troglodytes (taxid: 9598) confident no hit no match PF12529::Xylo_C 99.92::78-133 GO:0050650::chondroitin sulfate proteoglycan biosynthetic process confident hh_2gak_A_1::1-41,47-57,61-77 confident psy13404 167 P49736::DNA replication licensing factor MCM2 ::Acts as component of the MCM2-7 complex (MCM complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the MCM2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differentially to the complex helicase activity. Required for the entry in S phase and for cell division.::Homo sapiens (taxid: 9606) confident no hit no match PF12619::MCM2_N 99.92::65-157 GO:0044424::intracellular part confident no hit no match psy13631 81 O75581::Low-density lipoprotein receptor-related protein 6 ::Component of the Wnt-Fzd-LRP5-LRP6 complex that triggers beta-catenin signaling through inducing aggregation of receptor-ligand complexes into ribosome-sized signalsomes. Cell-surface coreceptor of Wnt/beta-catenin signaling, which plays a pivotal role in bone formation. The Wnt-induced Fzd/LRP6 coreceptor complex recruits DVL1 polymers to the plasma membrane which, in turn, recruits the AXIN1/GSK3B-complex to the cell surface promoting the formation of signalsomes and inhibiting AXIN1/GSK3-mediated phosphorylation and destruction of beta-catenin. Required for posterior patterning of the epiblast during gastrulation.::Homo sapiens (taxid: 9606) confident no hit no match PF12662::cEGF 97.81::2-16 GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_3s94_A_1::2-80 very confident psy8927 1196 Q8R1F6::Protein HID1 ::::Mus musculus (taxid: 10090) confident no hit no match PF12722::Hid1 100.00::1-1193 GO:0000138::Golgi trans cisterna confident rp_1vt4_I_4::35-37,39-50,64-142,158-161,163-172,174-191,193-197,200-219,221-253,255-266,273-280,294-302,315-322,334-369,374-413,420-426,429-435,443-450,452-455,460-464,470-473 portable psy8934 129 Q8R1F6::Protein HID1 ::::Mus musculus (taxid: 10090) confident no hit no match PF12722::Hid1 100.00::5-127 GO:0000138::Golgi trans cisterna confident no hit no match psy3908 170 no hit no match no hit no match PF12736::CABIT 99.88::30-163 GO:0045179::apical cortex confident no hit no match psy11494 197 P42345::Serine/threonine-protein kinase mTOR ::Serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. Functions as part of 2 structurally and functionally distinct signaling complexes mTORC1 and mTORC2 (mTOR complex 1 and 2). Activated mTORC1 up-regulates protein synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. This includes phosphorylation of EIF4EBP1 and release of its inhibition toward the elongation initiation factor 4E (eiF4E). Moreover, phosphorylates and activates RPS6KB1 and RPS6KB2 that promote protein synthesis by modulating the activity of their downstream targets including ribosomal protein S6, eukaryotic translation initiation factor EIF4B and the inhibitor of translation initiation PDCD4. Regulates ribosome synthesis by activating RNA polymerase III-dependent transcription through phosphorylation and inhibition of MAF1 a RNA polymerase III-repressor. In parallel to protein synthesis, also regulates lipid synthesis through SREBF1/SREBP1 and LPIN1. To maintain energy homeostasis mTORC1 may also regulate mitochondrial biogenesis through regulation of PPARGC1A. mTORC1 also negatively regulates autophagy through phosphorylation of ULK1. Under nutrient sufficiency, phosphorylates ULK1 at 'Ser-758', disrupting the interaction with AMPK and preventing activation of ULK1. Also prevents autophagy through phosphorylation of the autophagy inhibitor DAP. mTORC1 exerts a feedback control on upstream growth factor signaling that includes phosphorylation and activation of GRB10 a INSR-dependent signaling suppressor. Among other potential targets mTORC1 may phosphorylate CLIP1 and regulate microtubules. As part of the mTORC2 complex MTOR may regulate other cellular processes including survival and organization of the cytoskeleton. Plays a critical role in the phosphorylation at 'Ser-473' of AKT1, a pro-survival effector of phosphoinositide 3-kinase, facilitating its activation by PDK1. mTORC2 may regulate the actin cytoskeleton, through phosphorylation of PRKCA, PXN and activation of the Rho-type guanine nucleotide exchange factors RHOA and RAC1A or RAC1B. mTORC2 also regulates the phosphorylation of SGK1 at 'Ser-422'.::Homo sapiens (taxid: 9606) confident no hit no match PF12755::Vac14_Fab1_bd 98.07::102-180 GO:0005829::cytosol confident hh_2qk2_A_1::31-121,123-143,150-182 confident psy12917 198 Q8IGJ0::Protein EFR3 homolog cmp44E ::An essential gene required for embryogenesis; required for cell viability.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF12755::Vac14_Fab1_bd 90.36::128-173 GO:0045202::synapse confident hh_4fdd_A_1::15-35,40-55,57-97,99-118,121-121,126-146,152-152,155-171 portable psy5800 152 Q8BPU7::Engulfment and cell motility protein 1 ::Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.::Mus musculus (taxid: 10090) confident no hit no match PF12814::Mcp5_PH 97.15::74-148 GO:0016477::cell migration confident hh_3a98_B_1::52-92,96-151 very confident psy313 93 Q8BPU7::Engulfment and cell motility protein 1 ::Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Acts in assocation with DOCK1 and CRK. Was initially proposed to be required in complex with DOCK1 to activate Rac Rho small GTPases. May enhance the guanine nucleotide exchange factor (GEF) activity of DOCK1.::Mus musculus (taxid: 10090) confident no hit no match PF12814::Mcp5_PH 96.72::7-43 GO:0051179::localization confident hh_3a98_B_1::3-16,19-93 very confident psy6128 529 Q6N021::Methylcytosine dioxygenase TET2 ::Catalyzes the conversion of methylcytosine (5mC) to 5-hydroxymethylcytosine (hmC). Plays an important role in myelopoiesis. The clear function of 5-hydroxymethylcytosine (hmC) is still unclear but it may influence chromatin structure and recruit specific factors or may constitute an intermediate component in cytosine demethylation.::Homo sapiens (taxid: 9606) confident no hit no match PF12851::Tet_JBP 100.00::376-501 GO:0030154::cell differentiation confident no hit no match psy6131 225 Q6N021::Methylcytosine dioxygenase TET2 ::Catalyzes the conversion of methylcytosine (5mC) to 5-hydroxymethylcytosine (hmC). Plays an important role in myelopoiesis. The clear function of 5-hydroxymethylcytosine (hmC) is still unclear but it may influence chromatin structure and recruit specific factors or may constitute an intermediate component in cytosine demethylation.::Homo sapiens (taxid: 9606) confident no hit no match PF12851::Tet_JBP 100.00::111-221 GO:0055114::oxidation-reduction process confident no hit no match psy6124 171 Q8BG87::Methylcytosine dioxygenase TET3 ::Catalyzes the conversion of methylcytosine (5mC) to 5-hydroxymethylcytosine (hmC).::Mus musculus (taxid: 10090) portable no hit no match PF12851::Tet_JBP 99.82::14-64 GO:0080111::DNA demethylation confident no hit no match psy7757 143 no hit no match no hit no match PF12872::OST-HTH 98.88::73-139 GO:0010923::negative regulation of phosphatase activity confident hh_3s93_A_1::71-89,91-135 portable psy11933 79 Q9D115::Zinc finger protein 706 ::::Mus musculus (taxid: 10090) very confident no hit no match PF12907::zf-met2 99.57::41-75 GO:0008270::zinc ion binding confident hh_1wvk_A_1::2-20,24-27,31-77 confident psy5197 564 P14599::Beta-amyloid-like protein ::Probably corresponds to the protein encoded by the essential locus vnd, a gene required for embryonic nervous system development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF12925::APP_E2 100.00::323-507 GO:0005576::extracellular region confident hh_3ktm_A_1::1-116 very confident psy13151 256 Q9UQP3::Tenascin-N ::Involved in neurite outgrowth and cell migration in hippocampal explants.::Homo sapiens (taxid: 9606) portable no hit no match PF12947::EGF_3 98.30::209-238 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2gy5_A_1::73-82,85-98,102-106,131-137,141-144,147-161,164-178,181-194,206-207,210-221,225-238 confident psy5614 98 no hit no match no hit no match PF12947::EGF_3 98.98::57-88 GO:0040005::chitin-based cuticle attachment to epithelium confident hh_2bou_A_2::2-11,15-38,56-83 confident psy2512 115 Q28034::Glucosidase 2 subunit beta ::Regulatory subunit of glucosidase II.::Bos taurus (taxid: 9913) confident no hit no match PF12999::PRKCSH-like 100.00::20-101 GO:0003723::RNA binding confident hh_2fcw_B_1::38-47,49-84,89-101 very confident psy15739 95 O35593::26S proteasome non-ATPase regulatory subunit 14 ::Metalloprotease component of the 26S proteasome that specifically cleaves 'Lys-63'-linked polyubiquitin chains. The 26S proteasome is involved in the ATP-dependent degradation of ubiquitinated proteins. The function of the 'Lys-63'-specific deubiquitination of the proteasome is unclear.::Mus musculus (taxid: 10090) confident no hit no match PF13012::MitMem_reg 99.05::6-93 GO:0061133::endopeptidase activator activity confident hh_4b4t_V_1::3-94 very confident psy2511 80 Q28034::Glucosidase 2 subunit beta ::Regulatory subunit of glucosidase II.::Bos taurus (taxid: 9913) portable no hit no match PF13015::PRKCSH_1 99.96::1-80 GO:0003723::RNA binding confident hh_3aih_A_1::1-80 very confident psy12809 153 Q5R8S4::Endoplasmic reticulum lectin 1 ::Probable lectin that binds selectively to improperly folded lumenal proteins. May function in endoplasmic reticulum quality control and endoplasmic reticulum-associated degradation (ERAD) of both non-glycosylated proteins and glycoproteins.::Pongo abelii (taxid: 9601) portable no hit no match PF13015::PRKCSH_1 99.95::7-150 GO:0005783::endoplasmic reticulum confident hh_3aih_A_1::21-50,54-70,73-80,83-84,86-148 very confident psy12813 98 Q5R8S4::Endoplasmic reticulum lectin 1 ::Probable lectin that binds selectively to improperly folded lumenal proteins. May function in endoplasmic reticulum quality control and endoplasmic reticulum-associated degradation (ERAD) of both non-glycosylated proteins and glycoproteins.::Pongo abelii (taxid: 9601) confident no hit no match PF13015::PRKCSH_1 98.41::15-84 GO:0005788::endoplasmic reticulum lumen confident hh_3aih_A_1::3-24,26-80 confident psy13289 106 Q9DGE0::Dual specificity mitogen-activated protein kinase kinase 6 ::Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in the MAP kinases p38 and plays an important role in the regulation of cellular responses to cytokines and all kinds of stresses. The p38 MAP kinase signal transduction pathway leads to direct activation of transcription factors. Phosphorylation by MAP2K6 asymmetrically activates p38 on one side of the blastodisc, an event which is necessary for blastomere cleavage.::Danio rerio (taxid: 7955) confident no hit no match PF13095::FTA2 95.39::71-103 GO:0004672::protein kinase activity confident rp_3an0_A_1::31-103 very confident psy2080 93 B5FZA8::LYR motif-containing protein 4 ::Required for nuclear and mitochondrial iron-sulfur protein biosynthesis.::Taeniopygia guttata (taxid: 59729) confident no hit no match PF13232::Complex1_LYR_1 99.83::6-66 GO:0005634::nucleus very confident hh_4b6x_A_1::27-73 portable psy2089 216 B5FZA8::LYR motif-containing protein 4 ::Required for nuclear and mitochondrial iron-sulfur protein biosynthesis.::Taeniopygia guttata (taxid: 59729) portable no hit no match PF13232::Complex1_LYR_1 99.71::39-99 GO:0005634::nucleus confident rp_1vt4_I_1::45-72,74-87,89-115,118-188,196-208,211-214 portable psy15834 175 Q0VCR0::LYR motif-containing protein 5 ::::Bos taurus (taxid: 9913) confident no hit no match PF13232::Complex1_LYR_1 99.57::97-153 GO:0005739::mitochondrion confident no hit no match psy4709 86 Q5RIM0::LYR motif-containing protein 2 ::::Danio rerio (taxid: 7955) confident no hit no match PF13232::Complex1_LYR_1 99.80::19-79 GO:0005739::mitochondrion confident hh_4b6x_A_1::41-83 portable psy18141 113 Q6TUF2::Protein ACN9 homolog, mitochondrial ::::Rattus norvegicus (taxid: 10116) confident no hit no match PF13233::Complex1_LYR_2 99.30::1-89 GO:0005758::mitochondrial intermembrane space confident no hit no match psy10905 219 Q9TZM3::Leucine-rich repeat serine/threonine-protein kinase 1 ::Determines polarized sorting of synaptic vesicle (SV) proteins to the axons by excluding SV proteins from the dendrite-specific transport machinery in the Golgi. Role in stress response. Appears to antagonize the effects of pink-1 both in the regulation of axon guidance and stress response.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF13360::PQQ_2 93.68::24-163 GO:0031902::late endosome membrane confident hh_4aow_A_1::14-47,50-56,63-71,73-75,78-108,121-153 confident psy14029 277 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF13385::Laminin_G_3 99.78::79-250 GO:0043025::neuronal cell body very confident hh_3flp_A_1::80-114,116-117,124-152,156-181,185-204,206-256 confident psy10340 98 Q9JI85::Nucleobindin-2 ::Calcium-binding protein. May have a role in calcium homeostasis.::Rattus norvegicus (taxid: 10116) confident no hit no match PF13405::EF-hand_6 97.17::37-62 GO:0005794::Golgi apparatus confident hh_1snl_A_1::16-97 very confident psy3703 79 Q8R349::Cell division cycle protein 16 homolog ::Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex acts by mediating ubiquitination and subsequent degradation of target proteins: it mainly mediates the formation of 'Lys-11'-linked polyubiquitin chains and, to a lower extent, the formation of 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.::Mus musculus (taxid: 10090) portable no hit no match PF13414::TPR_11 96.87::15-65 GO:0005634::nucleus confident hh_3hym_B_1::4-71 very confident psy8547 115 P59111::Potassium voltage-gated channel subfamily H member 8 ::Pore-forming (alpha) subunit of voltage-gated potassium channel. Elicits a slowly activating, outward rectifying current (By similarity). Channel properties may be modulated by cAMP and subunit assembly.::Mus musculus (taxid: 10090) portable no hit no match PF13426::PAS_9 98.56::5-43 GO:0071805::potassium ion transmembrane transport confident hh_1n9l_A_1::5-43 confident psy15557 207 Q54DM9::GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase ::::Dictyostelium discoideum (taxid: 44689) confident no hit no match PF13439::Glyco_transf_4 97.54::56-194 GO:0005789::endoplasmic reticulum membrane confident hh_3oy2_A_1::54-82,86-94 portable psy16186 111 Q8CIW5::Twinkle protein, mitochondrial ::Involved in mitochondrial DNA (mtDNA) metabolism. Could function as an adenine nucleotide-dependent DNA helicase. Function infered to be critical for lifetime maintenance of mtDNA integrity. May be a key regulator of mtDNA copy number in mammals.::Mus musculus (taxid: 10090) portable no hit no match PF13481::AAA_25 98.20::2-110 GO:0051260::protein homooligomerization confident hh_1q57_A_1::2-20,22-85,87-110 confident psy9898 82 Q5ZM55::Protein fem-1 homolog B ::Component of an E3 ubiquitin-protein ligase complex, in which it may act as a substrate recognition subunit. Involved in apoptosis by acting as a death receptor-associated protein that mediates apoptosis.::Gallus gallus (taxid: 9031) portable no hit no match PF13606::Ank_3 91.04::2-19 GO:0016567::protein ubiquitination confident no hit no match psy11721 99 Q03562::Beta-1,4-mannosyltransferase bre-3 ::Glycosyltransferase with a proposed role in glycosphingolipid biosynthesis. Involved in susceptibility to pore-forming crystal toxins in conjunction with bre-1, bre-2, bre-4 and bre-5. Has a role in determining brood size.::Caenorhabditis elegans (taxid: 6239) confident no hit no match PF13632::Glyco_trans_2_3 98.92::12-98 GO:0019187::beta-1,4-mannosyltransferase activity confident hh_3bcv_A_1::9-37 portable psy17506 252 P49793::Nuclear pore complex protein Nup98-Nup96 ::Plays a role in the bidirectional transport across the nucleoporin complex (NPC). The repeat domain has a direct role in the transport.::Rattus norvegicus (taxid: 10116) portable no hit no match PF13634::Nucleoporin_FG 97.41::120-127 GO:0005635::nuclear envelope confident hh_3mmy_B_1::156-211 very confident psy13798 614 Q9BVL2::Nucleoporin p58/p45 ::Component of the nuclear pore complex, a complex required for the trafficking across the nuclear membrane.::Homo sapiens (taxid: 9606) portable no hit no match PF13634::Nucleoporin_FG 92.36::425-430 GO:0005635::nuclear envelope confident hh_3t98_B_1::36-85 confident psy14464 175 D7REX8::Protein unc-45 homolog B ::Acts as a co-chaperone for HSP90 and is required for proper folding of the myosin motor domain (By similarity). Plays a role in sarcomere formation during muscle cell development.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF13646::HEAT_2 94.35::18-118 GO:0034605::cellular response to heat confident hh_3now_A_1::5-174 very confident psy12162 242 Q5FWK3::Rho GTPase-activating protein 1 ::GTPase activator for the Rho, Rac and Cdc42 proteins, converting them to the putatively inactive GDP-bound state. Cdc42 seems to be the preferred substrate.::Mus musculus (taxid: 10090) confident no hit no match PF13716::CRAL_TRIO_2 99.94::119-240 GO:0043089::positive regulation of Cdc42 GTPase activity confident hh_3pg7_A_1::109-144,146-240 very confident psy17355 849 Q0IHU9::Protein prune homolog 2 ::::Xenopus tropicalis (taxid: 8364) portable no hit no match PF13716::CRAL_TRIO_2 99.97::687-838 GO:0044446::intracellular organelle part confident hh_3pg7_A_1::676-685,687-698,701-714,716-716,721-840 very confident psy6982 222 Q9GUM2::Beta-1,4-N-acetylgalactosaminyltransferase bre-4 ::Catalyzes the transfer of galactose onto proteins or lipids. Required for susceptibility to pore-forming crystal toxins in conjunction with bre-1, bre-2, bre-3 and bre-5.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF13733::Glyco_transf_7N 100.00::88-211 GO:0008376::acetylgalactosaminyltransferase activity confident hh_2fy7_A_1::81-116,119-218 very confident psy12287 76 Q9JL19::Nuclear receptor coactivator 6 ::Nuclear receptor coactivator that directly binds nuclear receptors and stimulates the transcriptional activities in a hormone-dependent fashion. Coactivates expression in an agonist-and AF2-dependent manner. Involved in the coactivation of different nuclear receptors, such as for steroids (GR and ERs), retinoids (RARs and RXRs), thyroid hormone (TRs), vitamin D3 (VDR) and prostanoids (PPARs). Probably functions as a general coactivator, rather than just a nuclear receptor coactivator. May also be involved in the coactivation of the NF-kappa-B pathway. May coactivate expression via a remodeling of chromatin and its interaction with histone acetyltransferase proteins. Involved in placental, cardiac, hepatic and embryonic development.::Mus musculus (taxid: 10090) confident no hit no match PF13820::Nucleic_acid_bd 99.93::4-71 GO:0003713::transcription coactivator activity confident hh_2k9i_A_1::26-55 portable psy13307 286 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF13833::EF-hand_8 96.31::42-72 GO:0005875::microtubule associated complex confident hh_2lv7_A_1::40-69 portable psy1644 923 Q2RBN7::Clathrin heavy chain 1 ::Clathrin is the major protein of the polyhedral coat of coated pits and vesicles.::Oryza sativa subsp. japonica (taxid: 39947) portable no hit no match PF13838::Clathrin_H_link 99.65::402-444 GO:0031623::receptor internalization confident hh_1xi4_A_1::202-204,206-278,289-655,669-686,688-724 very confident psy5544 96 Q9D1Q6::Endoplasmic reticulum resident protein 44 ::Mediates thiol-dependent retention in the early secretory pathway, forming mixed disulfides with substrate proteins through its conserved CRFS motif. Inhibits the calcium channel activity of ITPR1. May have a role in the control of oxidative protein folding in the endoplasmic reticulum. Required to retain ERO1L and ERO1LB in the endoplasmic reticulum.::Mus musculus (taxid: 10090) confident no hit no match PF13848::Thioredoxin_6 98.97::4-87 GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_2r2j_A_1::4-7,9-18,21-94 very confident psy8508 246 Q2NL37::BRCA2 and CDKN1A-interacting protein ::May promote cell cycle arrest by enhancing the inhibition of CDK2 activity by CDKN1A. May be required for repair of DNA damage by homologous recombination in conjunction with BRCA2. May not be involved in non-homologous end joining (NHEJ).::Bos taurus (taxid: 9913) confident no hit no match PF13862::BCIP 100.00::35-239 GO:0005635::nuclear envelope confident rp_1vt4_I_1::23-39,41-81,84-108,110-193,200-209 portable psy3276 62 Q7PXY4::Histone deacetylase complex subunit SAP30 homolog ::Required for the function of the class 1 Sin3-histone deacetylase complex (HDAC).::Anopheles gambiae (taxid: 7165) confident no hit no match PF13866::zf-SAP30 99.95::17-61 GO:0003714::transcription corepressor activity confident hh_2kdp_A_1::18-61 very confident psy3274 115 Q7PXY4::Histone deacetylase complex subunit SAP30 homolog ::Required for the function of the class 1 Sin3-histone deacetylase complex (HDAC).::Anopheles gambiae (taxid: 7165) confident no hit no match PF13867::SAP30_Sin3_bdg 99.92::46-98 GO:0003714::transcription corepressor activity confident hh_2ld7_A_1::24-113 very confident psy7574 142 no hit no match no hit no match PF13868::Trichoplein 95.48::11-123 GO:0031981::nuclear lumen confident rp_2dfs_A_2::5-139 portable psy7739 142 no hit no match no hit no match PF13868::Trichoplein 94.64::25-137 GO:0043234::protein complex confident rp_1i84_S_1::30-61,63-74,76-91,93-139 portable psy17635 103 P20241::Neuroglian ::The long isoform may play a role in neural and glial cell adhesion in the developing embryo. The short isoform may be a more general cell adhesion molecule involved in other tissues and imaginal disk morphogenesis. Vital for embryonic development. Essential for septate junctions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion. Required for the blood-brain barrier formation.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF13882::Bravo_FIGEY 99.92::33-103 GO:0005919::pleated septate junction confident hh_2knc_A_1::7-36 portable psy9871 340 P69735::Rab3 GTPase-activating protein catalytic subunit (Fragments) ::Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily (RAB3A, RAB3B, RAB3C and RAB3D). Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP. Required for normal eye and brain development. May participate in neurodevelopmental processes such as proliferation, migration and differentiation before synapse formation, and non-synaptic vesicular release of neurotransmitters.::Rattus norvegicus (taxid: 10116) portable no hit no match PF13890::Rab3-GTPase_cat 100.00::4-144 GO:0005813::centrosome confident rp_1vt4_I_1::9-17,26-106,111-200,203-241 portable psy15193 106 P92204::Negative elongation factor E ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II by RNA polymerase II. The NELF complex, which acts via an association with the DSIF complex, causes transcriptional pausing.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF13893::RRM_5 90.99::21-43 GO:0017053::transcriptional repressor complex confident hh_3s8s_A_1::21-47 portable psy6233 271 Q7TNY6::Golgi resident protein GCP60 ::Involved in the maintenance of Golgi structure by interacting with giantin, affecting protein transport between the endoplasmic reticulum and Golgi. Involved in hormone-induced steroid biosynthesis in testicular Leydig cells.::Rattus norvegicus (taxid: 10116) confident no hit no match PF13897::GOLD_2 100.00::135-270 GO:0000139::Golgi membrane confident hh_1olm_A_1::106-118,127-178,201-201,207-207,216-270 very confident psy1287 292 no hit no match no hit no match PF13903::Claudin_2 99.29::86-214 GO:0005918::septate junction confident no hit no match psy9982 222 P16356::DNA-directed RNA polymerase II subunit RPB1 ::DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB1 is part of the core element with the central large cleft, the clamp element that moves to open and close the cleft and the jaws that are thought to grab the incoming DNA template. At the start of transcription, a single stranded DNA template strand of the promoter is positioned within the central active site cleft of Pol II. A bridging helix emanates from RPB1 and crosses the cleft near the catalytic site and is thought to promote translocation of Pol II by acting as a ratchet that moves the RNA-DNA hybrid through the active site by switching from straight to bent conformations at each step of nucleotide addition. During transcription elongation, Pol II moves on the template as the transcript elongates. Elongation is influenced by the phosphorylation status of the C-terminal domain (CTD) of Pol II largest subunit (RPB1), which serves as a platform for assembly of factors that regulate transcription initiation, elongation, termination and mRNA processing.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF13908::Shisa 95.31::10-32 GO:0005737::cytoplasm confident rp_3h0g_A_2::59-168 very confident psy4190 90 no hit no match no hit no match PF13909::zf-H2C2_5 96.86::21-42 GO:0005700::polytene chromosome confident hh_2rpc_A_1::21-42 portable psy2445 654 Q6AXF6::SID1 transmembrane family member 1 ::::Mus musculus (taxid: 10090) confident no hit no match PF13965::SID-1_RNA_chan 100.00::99-652 GO:0005765::lysosomal membrane confident no hit no match psy3837 93 Q8TDM6::Disks large homolog 5 ::May play a role at the plasma membrane in the maintenance of the structure of epithelial cells and in the transmission of extracellular signals to the membrane and cytoskeleton.::Homo sapiens (taxid: 9606) confident no hit no match PF14197::Cep57_CLD_2 96.47::12-79 GO:0005622::intracellular confident hh_3swk_A_1::22-84 portable psy5754 67 Q58DW5::60S ribosomal protein L5 ::Required for rRNA maturation and formation of the 60S ribosomal subunits (By similarity). This protein binds 5S RNA.::Bos taurus (taxid: 9913) portable no hit no match PF14204::Ribosomal_L18_c 99.42::1-54 GO:0005840::ribosome confident hh_2zkr_n_1::1-22,31-31,33-64 very confident psy14851 217 Q04690::Neurofibromin ::Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.::Mus musculus (taxid: 10090) confident no hit no match PF14228::MOR2-PAG1_mid 99.22::4-182 GO:0043234::protein complex confident no hit no match psy14865 98 Q04690::Neurofibromin ::Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.::Mus musculus (taxid: 10090) confident no hit no match PF14228::MOR2-PAG1_mid 98.00::12-97 GO:0043234::protein complex confident no hit no match psy17488 1446 E9Q8I9::Protein furry homolog ::Plays a crucial role in the structural integrity of mitotic centrosomes and in the maintenance of spindle bipolarity by promoting PLK1 activity at the spindle poles in early mitosis. May function as a scaffold promoting the interaction between AURKA and PLK1, thereby enhancing AURKA-mediated PLK1 phosphorylation.::Mus musculus (taxid: 10090) portable no hit no match PF14228::MOR2-PAG1_mid 99.37::89-291 GO:0044424::intracellular part confident no hit no match psy7415 396 O94915::Protein furry homolog-like ::Plays a key role in maintaining the integrity of polarized cell extensions during morphogenesis, regulates the actin cytoskeleton and plays a key role in patterning sensory neuron dendritic fields by promoting avoidance between homologous dendrites as well as by limiting dendritic branching (By similarity). May function as a transcriptional activator.::Homo sapiens (taxid: 9606) portable no hit no match PF14228::MOR2-PAG1_mid 100.00::74-197 GO:0048601::oocyte morphogenesis confident rp_1vt4_I_1::29-57,60-77,82-98,100-105,109-122,124-135,142-151,164-167,176-184,186-194,201-214,219-221,223-229 portable psy378 107 Q9VT28::Protein furry ::Trc/fry signaling pathway plays a key role in maintaining the integrity of polarized cell extensions (arista) during morphogenesis, regulates the actin cytoskeleton and plays a key role in patterning sensory neuron dendritic fields by promoting avoidance between homologous dendrites as well as by limiting dendritic branching. Fry positively regulates trc kinase activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14228::MOR2-PAG1_mid 99.27::26-86 GO:0048601::oocyte morphogenesis confident no hit no match psy375 93 Q9VT28::Protein furry ::Trc/fry signaling pathway plays a key role in maintaining the integrity of polarized cell extensions (arista) during morphogenesis, regulates the actin cytoskeleton and plays a key role in patterning sensory neuron dendritic fields by promoting avoidance between homologous dendrites as well as by limiting dendritic branching. Fry positively regulates trc kinase activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14228::MOR2-PAG1_mid 99.80::8-91 GO:0048601::oocyte morphogenesis confident no hit no match psy5943 133 O75165::DnaJ homolog subfamily C member 13 ::::Homo sapiens (taxid: 9606) confident no hit no match PF14237::DUF4339 99.80::44-88 GO:0044446::intracellular organelle part confident hh_1wh2_A_1::39-89,91-96 portable psy8882 204 Q9Y6X2::E3 SUMO-protein ligase PIAS3 ::Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase, stabilizing the interaction between UBE2I and the substrate, and as a SUMO-tethering factor. Plays a crucial role as a transcriptional coregulation in various cellular pathways, including the STAT pathway and the steroid hormone signaling pathway. Involved in regulating STAT3 signaling via inhibiting STAT3 DNA-binding and suppressing cell growth.::Homo sapiens (taxid: 9606) portable no hit no match PF14324::PINIT 99.95::65-204 GO:0010468::regulation of gene expression confident hh_4fo9_A_1::64-94,96-132,147-204 very confident psy5982 102 P30189::DNA topoisomerase 1 ::Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand than undergoes passage around the unbroken strand thus removing DNA supercoils. Finally, in the religation step, the DNA 5'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14370::Topo_C_assoc 100.00::12-97 GO:0009790::embryo development confident hh_1a31_A_1::2-53,55-56,68-71,75-97 very confident psy14785 211 Q58DW0::60S ribosomal protein L4 ::::Bos taurus (taxid: 9913) portable no hit no match PF14374::Ribos_L4_asso_C 99.95::1-70 GO:0005840::ribosome confident hh_4a17_C_1::1-23,25-86 very confident psy8415 1561 Q8CIQ7::Dedicator of cytokinesis protein 3 ::Potential guanine nucleotide exchange factor (GEF). GEF proteins activate some small GTPases by exchanging bound GDP for free GTP. Its interaction with presenilin proteins as well as its ability to stimulate Tau/MAPT phosphorylation suggest that it may be involved in Alzheimer disease. Ectopic expression in nerve cells decreases the secretion of beta-amyloid APBA1 protein and lowers the rate of cell-substratum adhesion, suggesting that it may affect the function of some small GTPase involved in the regulation of actin cytoskeleton or cell adhesion receptors.::Mus musculus (taxid: 10090) portable no hit no match PF14429::DOCK-C2 100.00::185-377 GO:0030695::GTPase regulator activity confident hh_2yin_A_1::937-957,959-1165,1171-1332 very confident psy7947 173 Q92608::Dedicator of cytokinesis protein 2 ::Involved in cytoskeletal rearrangements required for lymphocyte migration in response of chemokines. Activates RAC1 and RAC2, but not CDC42, by functioning as a guanine nucleotide exchange factor (GEF), which exchanges bound GDP for free GTP. May also participate in IL2 transcriptional activation via the activation of RAC2.::Homo sapiens (taxid: 9606) portable no hit no match PF14429::DOCK-C2 99.28::97-156 GO:0030695::GTPase regulator activity confident no hit no match psy17025 2010 Q8R1A4::Dedicator of cytokinesis protein 7 ::Functions as a guanine nucleotide exchange factor (GEF), which activates Rac1 and Rac3 Rho small GTPases by exchanging bound GDP for free GTP. Does not have a GEF activity for CDC42. Required for STMN1 'Ser-15' phosphorylation during axon formation and consequently for neuronal polarization.::Mus musculus (taxid: 10090) very confident no hit no match PF14429::DOCK-C2 100.00::536-718 GO:0035023::regulation of Rho protein signal transduction confident hh_3vhl_A_1::1718-1934,1936-1997,1999-2000 very confident psy9057 279 Q9VUQ8::DCN1-like protein ::May contribute to neddylation of cullin components of SCF-type E3 ubiquitin ligase complexes. Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14555::UBA_4 99.28::160-200 GO:0005634::nucleus confident hh_3tdu_A_1::211-279 very confident psy7603 130 B1H1E4::E3 ubiquitin-protein ligase arih1 ::E3 ubiquitin-protein ligase, which catalyzes polyubiquitination of target proteins together with ubiquitin-conjugating enzyme E2 ube2l3.::Xenopus tropicalis (taxid: 8364) confident no hit no match PF14555::UBA_4 98.04::57-97 GO:0006511::ubiquitin-dependent protein catabolic process confident hh_2jy5_A_1::58-66,68-94,96-97 portable psy8459 106 Q8HY67::Acidic leucine-rich nuclear phosphoprotein 32 family member A ::Implicated in a number of cellular processes, including proliferation, differentiation, caspase-dependent and caspase-independent apoptosis, suppression of transformation (tumor suppressor), inhibition of protein phosphatase 2A, regulation of mRNA trafficking and stability in association with ELAVL1, and inhibition of acetyltransferases as part of the INHAT (inhibitor of histone acetyltransferases) complex. Plays a role in E4F1-mediated transcriptional repression.::Canis familiaris (taxid: 9615) confident no hit no match PF14580::LRR_9 99.38::2-49 GO:0016023::cytoplasmic membrane-bounded vesicle confident hh_2je0_A_1::2-39 confident psy10771 100 B3DH20::Protein TILB homolog ::Plays a crucial role in regulating cilia motility in pronephric tubules, cloaca and neural tube. Required for establishing left-right asymmetry of the body plan; controls cell fate and convergent extension (CE) movements during gastrulation, respectively, via the Wnt and the planar cell polarity (PCP) signaling pathways. Required for the proper development of renal glomeruli and tubules.::Danio rerio (taxid: 7955) confident no hit no match PF14580::LRR_9 98.87::39-99 GO:0060287::epithelial cilium movement involved in determination of left/right asymmetry confident hh_1a9n_A_1::39-54,57-97 confident psy14584 563 O00327::Aryl hydrocarbon receptor nuclear translocator-like protein 1 ::ARNTL-CLOCK heterodimers activate E-box element (3'-CACGTG-5') transcription of a number of proteins of the circadian clock. This transcription is inhibited in a feedback loop by PER, and also by CRY proteins.::Homo sapiens (taxid: 9606) portable no hit no match PF14598::PAS_11 99.69::509-563 GO:0005737::cytoplasm confident hh_4f3l_B_1::215-337,339-366,383-383,396-401,406-414,418-443,471-471,473-474,476-563 very confident psy17809 294 Q8IXF0::Neuronal PAS domain-containing protein 3 ::May play a broad role in neurogenesis. May control regulatory pathways relevant to schizophrenia and to psychotic illness.::Homo sapiens (taxid: 9606) portable no hit no match PF14598::PAS_11 99.88::122-197 GO:0005737::cytoplasm confident hh_4dj2_A_1::2-9,12-42,50-53,59-61,66-66,69-70,72-72,79-101,106-199,204-208 very confident psy10704 211 Q9XTA5::Hypoxia-inducible factor 1-alpha ::Functions as a master transcriptional regulator of the adaptive response to hypoxia. Under hypoxic conditions, activates the transcription of over 40 genes, including erythropoietin, glucose transporters, glycolytic enzymes, vascular endothelial growth factor, HILPDA, and other genes whose protein products increase oxygen delivery or facilitate metabolic adaptation to hypoxia. Plays an essential role in embryonic vascularization, tumor angiogenesis and pathophysiology of ischemic disease. Binds to core DNA sequence 5'-[AG]CGTG-3' within the hypoxia response element (HRE) of target gene promoters. Activation requires recruitment of transcriptional coactivators such as CREBPB and EP300. Activity is enhanced by interaction with both, NCOA1 or NCOA2. Interaction with redox regulatory protein APEX seems to activate CTAD and potentiates activation by NCOA1 and CREBBP.::Bos taurus (taxid: 9913) portable no hit no match PF14598::PAS_11 99.69::149-211 GO:0005737::cytoplasm confident hh_4f3l_B_1::1-78,80-81,104-108,111-113,117-117,123-210 very confident psy7682 383 O02219::Aryl hydrocarbon receptor nuclear translocator homolog ::Has a role in cellular differentiation. Required for pharyngeal development. In collaboration with ahr-1 it is involved in RMEL/R and SDQR neuron cell migration. Acts in the cellular response to hypoxia. Involved in aggregation behavior by regulating soluble guanylate cyclase gene expression in the URX neurons.::Caenorhabditis elegans (taxid: 6239) portable no hit no match PF14598::PAS_11 99.71::284-382 GO:0031981::nuclear lumen confident hh_4f3l_B_1::42-76,80-81,85-111,115-118,122-303,306-325,327-330,334-337,339-345,349-365,373-382 very confident psy2788 161 O54967::Activated CDC42 kinase 1 ::Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.::Mus musculus (taxid: 10090) portable no hit no match PF14604::SH3_9 99.51::30-82 GO:0004713::protein tyrosine kinase activity confident hh_1cf4_B_1::87-126 very confident psy10225 207 Q63622::Disks large homolog 2 ::Required for perception of chronic pain through NMDA receptor signaling. Regulates surface expression of NMDA receptors in dorsal horn neurons of the spinal cord. Interacts with the cytoplasmic tail of NMDA receptor subunits as well as inward rectifying potassium channels. Involved in regulation of synaptic stability at cholinergic synapses. Part of the postsynaptic protein scaffold of excitatory synapses.::Rattus norvegicus (taxid: 10116) confident no hit no match PF14604::SH3_9 99.27::22-80 GO:0005856::cytoskeleton confident hh_3tvt_A_1::13-94,107-145,147-148,150-192 very confident psy6759 100 Q8IWW6::Rho GTPase-activating protein 12 ::GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.::Homo sapiens (taxid: 9606) confident no hit no match PF14604::SH3_9 99.62::10-61 GO:0005856::cytoskeleton confident hh_1x2p_A_1::6-17,20-48,50-65 very confident psy15854 191 O35413::Sorbin and SH3 domain-containing protein 2 ::Adapter protein that plays a role in the assembling of signaling complexes, being a link between ABL kinases and actin cytoskeleton. Can form complex with ABL1 and CBL, thus promoting ubiquitination and degradation of ABL1 or with AKT1 and PAK1, thus mediating AKT1-mediated activation of PAK1 (By similarity). Isoform 2 increases water and sodium absorption in the intestine and gall-bladder.::Rattus norvegicus (taxid: 10116) confident no hit no match PF14604::SH3_9 99.41::24-72 GO:0005899::insulin receptor complex confident hh_1ng2_A_1::19-83,91-136,139-157 very confident psy1682 70 Q9V9J3::Tyrosine-protein kinase Src42A ::Essential for correct eye morphogenesis (ommatidial R7 neuron formation), this requires the Ras1/MAPK signal transduction pathway. May be involved in the regulation of cytoskeleton organization and cell-cell contacts in developing ommatidia.::Drosophila melanogaster (taxid: 7227) very confident no hit no match PF14604::SH3_9 99.70::4-54 GO:0006099::tricarboxylic acid cycle very confident hh_3h0h_A_1::2-56 very confident psy13524 235 P09851::Ras GTPase-activating protein 1 ::Inhibitory regulator of the Ras-cyclic AMP pathway. Stimulates the GTPase of normal but not oncogenic Ras p21.::Bos taurus (taxid: 9913) confident no hit no match PF14604::SH3_9 99.52::138-189 GO:0010741::negative regulation of intracellular protein kinase cascade confident hh_3ps5_A_1::1-58 very confident psy15850 225 O74749::Class E vacuolar protein-sorting machinery protein hse1 ::Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB).::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match PF14604::SH3_9 99.63::64-116 GO:0030055::cell-substrate junction confident hh_1gri_A_1::61-71,76-162,164-183 very confident psy7685 137 Q62415::Apoptosis-stimulating of p53 protein 1 ::Regulator that plays a central role in regulation of apoptosis via its interaction with p53/TP53. Regulates TP53 by enhancing the DNA binding and transactivation function of TP53 on the promoters of proapoptotic genes in vivo.::Mus musculus (taxid: 10090) confident no hit no match PF14604::SH3_9 99.60::74-125 GO:0030296::protein tyrosine kinase activator activity confident hh_1ycs_B_1::7-135 very confident psy7951 122 Q14185::Dedicator of cytokinesis protein 1 ::Involved in cytoskeletal rearrangements required for phagocytosis of apoptotic cells and cell motility. Functions as a guanine nucleotide exchange factor (GEF), which activates Rac Rho small GTPases by exchanging bound GDP for free GTP. Its GEF activity may be enhanced by ELMO1.::Homo sapiens (taxid: 9606) portable no hit no match PF14604::SH3_9 93.97::20-43 GO:0030695::GTPase regulator activity confident hh_3a98_A_1::21-122 very confident psy4227 157 Q6FN49::Class E vacuolar protein-sorting machinery protein HSE1 ::Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB).::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) portable no hit no match PF14604::SH3_9 99.63::32-82 GO:0043234::protein complex confident hh_2d8h_A_1::24-87 very confident psy4221 200 Q96B97::SH3 domain-containing kinase-binding protein 1 ::Adapter protein involved in regulating diverse signal transduction pathways. Involved in the regulation of endocytosis and lysosomal degradation of ligand-induced receptor tyrosine kinases, including EGFR and MET/hepatocyte growth factor receptor, through a association with CBL and endophilins. The association with CBL, and thus the receptor internalization, may inhibited by an interaction with PDCD6IP and/or SPRY2. Involved in regulation of ligand-dependent endocytosis of the IgE receptor. Attenuates phosphatidylinositol 3-kinase activity by interaction with its regulatory subunit (By similarity). May be involved in regulation of cell adhesion; promotes the interaction between TTK2B and PDCD6IP. May be involved in the regulation of cellular stress response via the MAPK pathways through its interaction with MAP3K4. Is involved in modulation of tumor necrosis factor mediated apoptosis. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape and migration.::Homo sapiens (taxid: 9606) portable no hit no match PF14604::SH3_9 99.48::110-158 GO:0044456::synapse part confident hh_1ng2_A_1::32-72,75-96,98-163 very confident psy4489 72 no hit no match no hit no match PF14604::SH3_9 99.52::17-63 GO:0045202::synapse confident hh_1hsq_A_1::10-42,48-62 very confident psy7083 95 Q9NZM3::Intersectin-2 ::Adapter protein that may provide indirect link between the endocytic membrane traffic and the actin assembly machinery. May regulate the formation of clathrin-coated vesicles.::Homo sapiens (taxid: 9606) confident no hit no match PF14604::SH3_9 99.66::14-61 GO:0045860::positive regulation of protein kinase activity confident rp_1uhf_A_1::8-65 very confident psy9690 111 A7Z019::Transcription activator BRG1 ::Transcriptional coactivator cooperating with nuclear hormone receptors to potentiate transcriptional activation. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene. Component of the CREST-BRG1 complex, a multiprotein complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. In resting neurons, transcription of the c-fOS promoter is inhibited by BRG1-dependent recruitment of a phospho-RB1-HDAC repressor complex. Upon calcium influx, RB1 is dephosphorylated by calcineurin, which leads to release of the repressor complex. At the same time, there is increased recruitment of CREBBP to the promoter by a CREST-dependent mechanism, which leads to transcriptional activation. The CREST-BRG1 complex also binds to the NR2B promoter, and activity-dependent induction of NR2B expression involves a release of HDAC1 and recruitment of CREBBP. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth. SMARCA4/BAF190A may promote neural stem cell self-renewal/proliferation by enhancing Notch-dependent proliferative signals, while concurrently making the neural stem cell insensitive to SHH-dependent differentiating cues. Acts as a corepressor of ZEB1 to regulate E-cadherin transcription and is required for induction of epithelial-mesenchymal transition (EMT) by ZEB1.::Bos taurus (taxid: 9913) confident no hit no match PF14619::SnAC 99.09::64-111 GO:0000790::nuclear chromatin confident no hit no match psy1815 238 Q9W420::Transcription elongation factor SPT6 ::Acts to stimulate transcriptional elongation by RNA polymerase II.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14633::SH2_2 100.00::1-166 GO:0005705::polytene chromosome interband confident hh_3psi_A_1::1-85,89-171 very confident psy15136 107 P05413::Fatty acid-binding protein, heart ::FABP are thought to play a role in the intracellular transport of long-chain fatty acids and their acyl-CoA esters.::Homo sapiens (taxid: 9606) confident no hit no match PF14651::Lipocalin_7 99.98::1-107 GO:0005829::cytosol confident hh_1ftp_A_1::1-23,25-107 very confident psy460 117 Q9VQF9::SNAPIN protein homolog ::Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14712::Snapin_Pallidin 99.90::25-114 GO:0005794::Golgi apparatus confident hh_3u0c_A_1::27-51,53-61,65-113 confident psy14123 102 Q3SZ36::Transmembrane protein 18 ::Transcription repressor. Sequence-specific ssDNA and dsDNA binding protein, with preference for GCT end CTG repeats. Cell migration modulator which enhances the glioma-specific migration ability of neural stem cells (NSC) and neural precursor cells (NPC).::Bos taurus (taxid: 9913) confident no hit no match PF14770::TMEM18 100.00::4-91 GO:0016477::cell migration confident no hit no match psy5836 66 P30432::Furin-like protease 2 ::Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14843::GF_recep_IV 99.51::2-64 GO:0005794::Golgi apparatus confident hh_1mox_A_1::2-20,23-43,46-47,50-65 very confident psy16704 146 Q23983::Soluble NSF attachment protein ::Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Also between the endosome and phagosome.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14938::SNAP 100.00::30-140 GO:0043679::axon terminus confident hh_1qqe_A_1::31-146 very confident psy17867 81 Q8BQ89::LIX1-like protein ::::Mus musculus (taxid: 10090) confident no hit no match PF14954::LIX1 100.00::2-81 GO:0005737::cytoplasm confident no hit no match psy17864 151 Q8BQ89::LIX1-like protein ::::Mus musculus (taxid: 10090) confident no hit no match PF14954::LIX1 100.00::1-144 GO:0005737::cytoplasm confident no hit no match psy17866 127 Q8BQ89::LIX1-like protein ::::Mus musculus (taxid: 10090) very confident no hit no match PF14954::LIX1 100.00::1-120 GO:0005737::cytoplasm confident hh_2b7v_A_1::2-12,26-49 portable psy13055 97 Q9VCC3::28S ribosomal protein S24, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14955::MRP-S24 100.00::2-97 GO:0005739::mitochondrion confident no hit no match psy13053 242 Q9VCC3::28S ribosomal protein S24, mitochondrial ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14955::MRP-S24 100.00::19-134 GO:0044446::intracellular organelle part confident hh_1g73_C_1::106-123,133-147,151-193 very confident psy9536 287 Q8MKL1::UPF0598 protein CG30010 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match PF14956::DUF4505 100.00::68-248 GO:0005739::mitochondrion confident no hit no match psy1832 111 Q6PBR7::Ribosomal protein 63, mitochondrial ::::Danio rerio (taxid: 7955) confident no hit no match PF14978::MRP-63 100.00::16-106 GO:0005761::mitochondrial ribosome confident no hit no match psy1064 107 Q6PBR7::Ribosomal protein 63, mitochondrial ::::Danio rerio (taxid: 7955) confident no hit no match PF14978::MRP-63 100.00::16-106 GO:0005761::mitochondrial ribosome confident no hit no match psy1833 105 Q9CQF8::Ribosomal protein 63, mitochondrial ::::Mus musculus (taxid: 10090) confident no hit no match PF14978::MRP-63 100.00::16-104 GO:0005761::mitochondrial ribosome confident no hit no match psy11705 81 Q8WVI0::Small integral membrane protein 4 ::::Homo sapiens (taxid: 9606) confident no hit no match PF15114::UPF0640 100.00::4-73 GO:0005739::mitochondrion confident no hit no match psy2906 85 Q13136::Liprin-alpha-1 ::May regulate the disassembly of focal adhesions. May localize receptor-like tyrosine phosphatases type 2A at specific sites on the plasma membrane, possibly regulating their interaction with the extracellular environment and their association with substrates.::Homo sapiens (taxid: 9606) confident no hit no match PF15186::TEX13 92.98::52-79 GO:0043234::protein complex confident hh_2fxo_A_1::31-79 portable psy2907 88 Q13136::Liprin-alpha-1 ::May regulate the disassembly of focal adhesions. May localize receptor-like tyrosine phosphatases type 2A at specific sites on the plasma membrane, possibly regulating their interaction with the extracellular environment and their association with substrates.::Homo sapiens (taxid: 9606) confident no hit no match PF15186::TEX13 93.16::52-79 GO:0043234::protein complex confident hh_2fxo_A_1::31-79 portable psy3977 99 Q9QX67::Death-associated protein 1 ::Negative regulator of autophagy. Involved in mediating interferon-gamma-induced cell death.::Rattus norvegicus (taxid: 10116) confident no hit no match PF15228::DAP 100.00::8-99 GO:0097190::apoptotic signaling pathway confident no hit no match psy676 159 Q9VAN6::Histone RNA hairpin-binding protein ::Involved in histone pre-mRNA 3' processing and couples histone mRNA production with the cell cycle. Both maternal and zygotic proteins play an essential and vital function for development.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF15247::SLBP_RNA_bind 100.00::28-99 GO:0003729::mRNA binding confident hh_2kjm_A_1::29-58 very confident psy10626 344 Q62261::Spectrin beta chain, non-erythrocytic 1 ::Fodrin, which seems to be involved in secretion, interacts with calmodulin in a calcium-dependent manner and is thus candidate for the calcium-dependent movement of the cytoskeleton at the membrane.::Mus musculus (taxid: 10090) portable no hit no match PF15410::PH_9 99.94::50-156 GO:0005912::adherens junction confident hh_1btn_A_1::51-154 very confident psy11101 157 Q9CWR0::Rho guanine nucleotide exchange factor 25 ::May play a role in actin cytoskeleton reorganization in different tissues since its activation induces formation of actin stress fibers. It works as a guanine nucleotide exchange factor for Rho family of small GTPases. Links specifically G alpha q/11-coupled receptors to RHOA activation (By similarity). May be an important regulator of processes involved in axon and dendrite formation. In neurons seems to be an exchange factor primarily for RAC1. Involved in skeletal myogenesis.::Mus musculus (taxid: 10090) portable no hit no match PF15411::PH_10 99.22::14-129 GO:0044763::single-organism cellular process confident hh_2rgn_B_1::2-34,37-78,92-155 very confident psy10433 152 no hit no match no hit no match PF15430::SVWC 99.60::45-118 GO:0005615::extracellular space confident hh_1u5m_A_1::42-49,52-62,64-74,79-90,95-99,105-114,117-121 portable psy10164 887 Q96KP1::Exocyst complex component 2 ::Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.::Homo sapiens (taxid: 9606) confident no hit no match PF15469::Sec5 100.00::194-372 GO:0010629::negative regulation of gene expression confident hh_1uad_C_1::2-92 very confident psy18100 76 P42698::DNA-damage-repair/toleration protein DRT111, chloroplastic ::Seems to be involved in the resistance to UV light and chemical DNA-damaging agents.::Arabidopsis thaliana (taxid: 3702) confident no hit no match PF15519::RBM39linker 96.74::26-43 GO:0005737::cytoplasm confident hh_2pe8_A_1::24-54,56-70 very confident psy2203 74 Q24562::Splicing factor U2AF 50 kDa subunit ::Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly.::Drosophila melanogaster (taxid: 7227) confident no hit no match PF15519::RBM39linker 97.61::11-33 GO:0030628::pre-mRNA 3'-splice site binding confident hh_3v4m_A_1::11-73 very confident psy16436 94 Q9BXF3::Cat eye syndrome critical region protein 2 ::Part of the CERF (CECR2-containing-remodeling factor) complex, which facilitates the perturbation of chromatin structure in an ATP-dependent manner. May be involved through its interaction with LRPPRC in the integration of cytoskeletal network with vesicular trafficking, nucleocytosolic shuttling, transcription, chromosome remodeling and cytokinesis.::Homo sapiens (taxid: 9606) portable no hit no match PF15613::WHIM2 97.93::14-30 GO:0090537::CERF complex confident no hit no match psy14770 77 P52161::Protein max ::Transcription regulator. Forms a sequence-specific DNA-binding protein complex with MYC or MAD which recognizes the core sequence 5'-CAC[GA]TG-3'. The MYC-MAX complex is a transcriptional activator, whereas the MAD-MAX complex is a repressor.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0000122::negative regulation of transcription from RNA polymerase II promoter confident hh_1nkp_B_1::14-62 very confident psy5912 122 no hit no match no hit no match no hit no match GO:0000122::negative regulation of transcription from RNA polymerase II promoter confident no hit no match psy14728 319 Q3T0W4::Protein phosphatase 1 regulatory subunit 7 ::Regulatory subunit of protein phosphatase 1. Inactivates the PPP1CC isoform 2 during epididymal sperm maturation.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0000164::protein phosphatase type 1 complex confident hh_4fmz_A_1::15-49,54-272,274-299,305-319 very confident psy10770 253 Q6TRW4::Sister chromatid cohesion protein PDS5 homolog B ::Regulator of sister chromatid cohesion in mitosis which may stabilize cohesin complex association with chromatin. May couple sister chromatid cohesion during mitosis to DNA replication. Cohesion ensures that chromosome partitioning is accurate in both meiotic and mitotic cells and plays an important role in DNA repair. Plays a role in androgen-induced proliferative arrest in prostate cells.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0000785::chromatin confident hh_2bpt_A_1::43-49,52-81,88-99,103-107,110-124,130-224 portable psy14059 220 Q9I7U4::Titin ::Key component in the assembly and functioning of adult and embryonic striated muscles and muscle tendons. By providing connections at the level of individual microfilaments, it contributes to the fine balance of forces between the two halves of the sarcomere. The size and extensibility of the cross-links are the main determinants of sarcomere extensibility properties of muscle. In non-muscle cells, seems to play a role in chromosome condensation and chromosome segregation during mitosis. Might link the lamina network to chromatin or nuclear actin, or both during interphase.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0000794::condensed nuclear chromosome confident rp_1vt4_I_1::9-41,43-65,71-82,84-91,96-116 portable psy9314 634 no hit no match no hit no match no hit no match GO:0000794::condensed nuclear chromosome confident rp_1vt4_I_1::181-210,213-240,244-260,269-313,316-318,320-358,360-389,393-406,409-437,439-442,445-529,533-551 portable psy8052 67 Q8MSY4::Vacuolar protein sorting-associated protein 51 homolog ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0000938::GARP complex confident rp_1vt4_I_1::5-14,22-59 portable psy7362 137 P90971::T-box protein 12 ::Involved in cell fate determination; required to pattern the posterior hindgut.::Caenorhabditis elegans (taxid: 6239) portable no hit no match no hit no match GO:0000977::RNA polymerase II regulatory region sequence-specific DNA binding confident hh_4a04_A_1::105-136 very confident psy16098 99 P55081::Microfibrillar-associated protein 1 ::Component of the elastin-associated microfibrils.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0001527::microfibril confident no hit no match psy10312 73 Q8SY33::Protein Gawky ::Required for gene silencing mediated by micro-RNAs (miRNAs). Silences both polyadenylated and deadenylated mRNAs. Required for miRNA-mediated translational repression and mRNA decay. Not required for miRNA target recognition. Necessary to initiate but not to maintain silencing. Promotes mRNA deadenylation through the recruitment of the CCR4-NOT and PAN complexes and promotes decapping by the DCP1-DCP2 complex. Dissociates from silenced mRNAs after deadenylation. Required for completion of nuclear divisions during early embryonic development.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0001700::embryonic development via the syncytial blastoderm confident no hit no match psy12389 104 Q9R1D7::Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 ::Promotes guanine-nucleotide exchange on ARF5. Promotes the activation of ARF5 through replacement of GDP with GTP.::Cricetulus griseus (taxid: 10029) confident no hit no match no hit no match GO:0002064::epithelial cell development confident no hit no match psy9526 113 no hit no match no hit no match no hit no match GO:0003676::nucleic acid binding confident no hit no match psy35 69 O46339::Homeobox protein homothorax ::All isoforms are required for patterning of the embryonic cuticle. Acts with exd to delimit the eye field and prevent inappropriate eye development. Isoforms that carry the homeodomain are required for proper localization of chordotonal organs within the peripheral nervous system and antennal identity; required to activate antennal-specific genes, such as sal and to repress the leg-like expression of dac. Necessary for the nuclear localization of the essential HOX cofactor, extradenticle (exd). Both necessary and sufficient for inner photoreceptors to adopt the polarization-sensitive 'dorsal rim area' (DRA) of the eye fate instead of the color-sensitive default state. This occurs by increasing rhabdomere size and uncoupling R7-R8 communication to allow both cells to express the same opsin rather than different ones as required for color vision.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0003677::DNA binding confident no hit no match psy15597 204 Q2LE08::Forkhead box protein P1-B ::Transcriptional repressor.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0003677::DNA binding confident hh_4i1l_A_1::133-204 very confident psy16600 152 O42395::Cellular nucleic acid-binding protein ::Single stranded DNA-binding protein, with specificity to the sterol regulatory element (SRE). Involved in sterol-mediated repression.::Gallus gallus (taxid: 9031) confident no hit no match no hit no match GO:0003697::single-stranded DNA binding confident hh_2lli_A_1::37-55,58-74,77-149 very confident psy779 50 P13002::Protein grainyhead ::Binds a CNS-specific regulatory element of the Dopa decarboxylase (Ddc) gene. Also interacts with sequences adjacent to other transcription units, including Ultrabithorax (Ubx) and engrailed (en). Activity in vivo may be required only at high levels transiently to activate the expression of Ddc in the CNS.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0003700::sequence-specific DNA binding transcription factor activity confident no hit no match psy778 75 P13002::Protein grainyhead ::Binds a CNS-specific regulatory element of the Dopa decarboxylase (Ddc) gene. Also interacts with sequences adjacent to other transcription units, including Ultrabithorax (Ubx) and engrailed (en). Activity in vivo may be required only at high levels transiently to activate the expression of Ddc in the CNS.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0003700::sequence-specific DNA binding transcription factor activity confident no hit no match psy5147 158 Q9H175::Cysteine/serine-rich nuclear protein 2 ::Binds to the consensus sequence 5'-AGAGTG-3' and has transcriptional activator activity (By similarity). May play a role in apoptosis.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0003700::sequence-specific DNA binding transcription factor activity confident hh_3hna_A_1::78-113,115-121 portable psy5788 204 Q9VEC1::Mediator of RNA polymerase II transcription subunit 17 ::Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. Required for activated transcription of the MtnA, MtnB and MtnD genes. Negatively regulates sex comb development.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0003713::transcription coactivator activity confident no hit no match psy17213 69 Q9ULD9::Zinc finger protein 608 ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0003714::transcription corepressor activity confident no hit no match psy10641 97 Q6A068::Cell division cycle 5-like protein ::DNA-binding protein involved in cell cycle control. May act as a transcription activator. Also seems to be involved in the second catalytic step of pre-mRNA splicing.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0003723::RNA binding confident no hit no match psy17485 237 Q4VGL6::Probable E3 ubiquitin-protein ligase Roquin ::Represses ICOS function, an essential costimulatory receptor for follicular T-cells. May act as an ubiquitin ligase that regulates ubiquitin-dependent control of AU-rich mRNAs by AUF1/HNRPD and HUR/ELAVL1. Plays a central role in the prevention of production of autoantibodies by repressing follicular helper T-cells and germinal centers.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0003730::mRNA 3'-UTR binding confident no hit no match psy3963 128 Q641K1::Cytosolic carboxypeptidase 1 ::Metallocarboxypeptidase that mediates deglutamylation of target proteins. Catalyzes the deglutamylation of polyglutamate side chains generated by post-translational polyglutamylation in proteins such as tubulins. Also removes gene-encoded polyglutamates from the carboxy-terminus of target proteins such as MYLK. Acts as a long-chain deglutamylase and specifically shortens long polyglutamate chains, while it is not able to remove the branching point glutamate, a process catalyzed by AGBL5/CCP5. Deglutamylation plays a key role in cerebellar Purkinje cell differentiation, accumulation of tubulin polyglutamylation causing neurodegeneration.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0004181::metallocarboxypeptidase activity confident hh_4a37_A_1::32-44,46-79,83-108 portable psy2616 82 P48321::Glutamate decarboxylase 2 ::Catalyzes the production of GABA.::Sus scrofa (taxid: 9823) confident no hit no match no hit no match GO:0004351::glutamate decarboxylase activity confident rp_2jis_A_1::25-82 very confident psy14718 87 Q24324::Dual specificity mitogen-activated protein kinase kinase dSOR1 ::Required downstream of Raf in the sevenless (sev), torso (tor), and Drosophila EGF receptor homolog (DER) signal transduction pathways. Involved in both positive regulation (at the posterior terminus) and negative regulation (at the anterior domain) of tll, as in other terminal class gene products, maybe via the ERK-A kinase.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0004708::MAP kinase kinase activity confident hh_3eqc_A_1::5-86 very confident psy13302 88 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) very confident no hit no match no hit no match GO:0005219::ryanodine-sensitive calcium-release channel activity very confident no hit no match psy16407 59 P51787::Potassium voltage-gated channel subfamily KQT member 1 ::Probably important in cardiac repolarization. Associates with KCNE1 (MinK) to form the I(Ks) cardiac potassium current. Elicits a rapidly activating, potassium-selective outward current. Muscarinic agonist oxotremorine-M strongly suppresses KCNQ1/KCNE1 current in CHO cells in which cloned KCNQ1/KCNE1 channels were coexpressed with M1 muscarinic receptors. May associate also with KCNE3 (MiRP2) to form the potassium channel that is important for cyclic AMP-stimulated intestinal secretion of chloride ions, which is reduced in cystic fibrosis and pathologically stimulated in cholera and other forms of secretory diarrhea.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005251::delayed rectifier potassium channel activity confident no hit no match psy16996 268 Q9HCF6::Transient receptor potential cation channel subfamily M member 3 ::Calcium channel mediating constitutive calcium ion entry. Its activity is increased by reduction in extracellular osmolarity, by store depletion and muscarinic receptor activation.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005261::cation channel activity confident hh_3e7k_A_1::92-124,129-148 confident psy4188 98 Q75NR7::ATP-dependent DNA helicase Q4 ::DNA-dependent ATPase (By similarity). May play a role in development of the palate and the limbs. May modulate chromosome segregation.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005488::binding confident no hit no match psy7982 72 P28028::Serine/threonine-protein kinase B-raf ::Involved in the transduction of mitogenic signals from the cell membrane to the nucleus. May play a role in the postsynaptic responses of hippocampal neuron.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005509::calcium ion binding confident no hit no match psy15398 88 P63328::Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform ::Calcium-dependent, calmodulin-stimulated protein phosphatase. This subunit may have a role in the calmodulin activation of calcineurin. Dephosphorylates DNM1L and HSPB1 (By similarity). Dephosphorylates SSH1.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005509::calcium ion binding confident no hit no match psy16618 51 Q6DN14::Multiple C2 and transmembrane domain-containing protein 1 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005509::calcium ion binding confident hh_3m7f_B_1::1-46 portable psy15010 94 Q6WV19::Polypeptide N-acetylgalactosaminyltransferase 2 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005509::calcium ion binding confident hh_1xhb_A_1::45-93 very confident psy9320 183 no hit no match no hit no match no hit no match GO:0005509::calcium ion binding confident rp_1vt4_I_1::91-106,110-124,126-130,133-158,161-171 portable psy3389 195 C0ZYA5::Translation initiation factor IF-2 ::One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.::Rhodococcus erythropolis (strain PR4 / NBRC 100887) (taxid: 234621) portable no hit no match no hit no match GO:0005576::extracellular region confident no hit no match psy363 59 Q03333::Neuroendocrine convertase 2 ::Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues.::Sus scrofa (taxid: 9823) portable no hit no match no hit no match GO:0005576::extracellular region confident hh_1p8j_A_1::3-32 confident psy2864 85 Q03333::Neuroendocrine convertase 2 ::Involved in the processing of hormone and other protein precursors at sites comprised of pairs of basic amino acid residues.::Sus scrofa (taxid: 9823) portable no hit no match no hit no match GO:0005576::extracellular region confident hh_1p8j_A_1::46-62,69-85 confident psy5554 272 Q6C908::Actin cytoskeleton-regulatory complex protein PAN1 ::Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) portable no hit no match no hit no match GO:0005576::extracellular region confident hh_3du1_X_1::230-245 portable psy14737 1171 no hit no match no hit no match no hit no match GO:0005576::extracellular region confident hh_3q6k_A_1::783-795,805-865,873-989,991-1018,1020-1048,1053-1097,1100-1114,1116-1171 very confident psy13567 173 Q2VWQ2::Protein kinase C-binding protein NELL1 ::Involved in the control of cell growth and differentiation.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005615::extracellular space confident hh_1u5m_A_1::4-25,27-54,60-71 confident psy8399 167 no hit no match no hit no match no hit no match GO:0005615::extracellular space confident no hit no match psy5512 245 Q09666::Neuroblast differentiation-associated protein AHNAK ::May be required for neuronal cell differentiation.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005618::cell wall confident no hit no match psy7377 83 P40991::Putative ribosomal RNA methyltransferase Nop2 ::Required for 60S ribosomal subunit synthesis. May act as ribosomal RNA methyltransferase.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match no hit no match GO:0005634::nucleus confident no hit no match psy17574 143 Q01826::DNA-binding protein SATB1 ::Crucial silencing factor contributing to the initiation of X inactivation mediated by Xist RNA that occurs during embryogenesis and in lymphoma (By similarity). Binds to DNA at special AT-rich sequences, the consensus SATB1-binding sequence (CSBS), at nuclear matrix- or scaffold-associated regions. Thought to recognize the sugar-phosphate structure of double-stranded DNA. Transcriptional repressor controlling nuclear and viral gene expression in a phosphorylated and acetylated status-dependent manner, by binding to matrix attachment regions (MARs) of DNA and inducing a local chromatin-loop remodeling. Acts as a docking site for several chromatin remodeling enzymes (e.g. PML at the MHC-I locus) and also by recruiting corepressors (HDACs) or coactivators (HATs) directly to promoters and enhancers. Modulates genes that are essential in the maturation of the immune T-cell CD8SP from thymocytes. Required for the switching of fetal globin species, and beta- and gamma-globin genes regulation during erythroid differentiation. Plays a role in chromatin organization and nuclear architecture during apoptosis. Interacts with the unique region (UR) of cytomegalovirus (CMV). Alu-like motifs and SATB1-binding sites provide a unique chromatin context which seems preferentially targeted by the HIV-1 integration machinery. Moreover, HIV-1 Tat may overcome SATB1-mediated repression of IL2 and IL2RA (interleukin) in T-cells by binding to the same domain than HDAC1. Delineates specific epigenetic modifications at target gene loci, directly up-regulating metastasis-associated genes while down-regulating tumor-suppressor genes. Reprograms chromatin organization and the transcription profiles of breast tumors to promote growth and metastasis.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005634::nucleus confident hh_3tuo_A_1::2-19,27-109 very confident psy13111 127 Q1LY51::Zinc finger protein 704 ::::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0005634::nucleus confident no hit no match psy14715 1147 Q6C0U8::Mitochondrial presequence protease ::ATP-independent protease that degrades mitochondrial transit peptides after their cleavage. Also degrades other unstructured peptides.::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) confident no hit no match no hit no match GO:0005634::nucleus confident hh_2fge_A_1::140-290,294-383,385-397,401-474,477-508,545-616,619-791,794-830,832-946,950-957,959-1120,1125-1134 very confident psy5673 119 Q6GVH5::Gametogenetin-binding protein 2 ::May be involved in spermatogenesis.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0005634::nucleus confident no hit no match psy15075 389 Q86NP2::Negative elongation factor A ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II. Has an essential role in postembryonic development.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005634::nucleus confident no hit no match psy7601 101 Q94981::Protein ariadne-1 ::Might act as an E3 ubiquitin-protein ligase, or as part of E3 complex, which accepts ubiquitin from specific E2 ubiquitin-conjugating enzymes, such as UBCD10/UBE2L3, and then transfers it to substrates.::Drosophila melanogaster (taxid: 7227) very confident no hit no match no hit no match GO:0005634::nucleus very confident rp_1q1q_A_1::37-81 portable psy7771 193 no hit no match no hit no match no hit no match GO:0005634::nucleus confident rp_1vt4_I_1::2-30,34-53,62-65,71-76,78-102,104-130,135-187 portable psy6174 174 no hit no match no hit no match no hit no match GO:0005634::nucleus confident hh_3uv1_A_1::21-42,45-113 confident psy10916 137 no hit no match no hit no match no hit no match GO:0005634::nucleus confident no hit no match psy8401 103 no hit no match no hit no match no hit no match GO:0005634::nucleus confident no hit no match psy7100 76 Q6VNB8::WD repeat and FYVE domain-containing protein 3 ::::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005635::nuclear envelope confident no hit no match psy10872 259 F1LP64::E3 ubiquitin-protein ligase TRIP12 ::E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardeless of the presence of lysine residues in target proteins. In normal cells, mediates ubiquitination and degradation of isoform p19ARF/ARF of CDKN2A, a lysine-less tumor suppressor required for p53/TP53 activation under oncogenic stress. In cancer cells, however, isoform p19ARF/ARF and TRIP12 are located in different cell compartments, preventing isoform p19ARF/ARF ubiquitination and degradation. Does not mediate ubiquitination of isoform p16-INK4a of CDKN2A. Also catalyzes ubiquitination of NAE1 and SMARCE1, leading to their degradation. Ubiquitination and degradation of target proteins is regulated by interaction with proteins such as MYC, TRADD or SMARCC1, which disrupt the interaction between TRIP12 and target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spreading of ubiquitinated chromatin at damaged chromosomes.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0005654::nucleoplasm confident no hit no match psy4369 71 F1LP64::E3 ubiquitin-protein ligase TRIP12 ::E3 ubiquitin-protein ligase involved in ubiquitin fusion degradation (UFD) pathway and regulation of DNA repair. Part of the ubiquitin fusion degradation (UFD) pathway, a process that mediates ubiquitination of protein at their N-terminus, regardeless of the presence of lysine residues in target proteins. In normal cells, mediates ubiquitination and degradation of isoform p19ARF/ARF of CDKN2A, a lysine-less tumor suppressor required for p53/TP53 activation under oncogenic stress. In cancer cells, however, isoform p19ARF/ARF and TRIP12 are located in different cell compartments, preventing isoform p19ARF/ARF ubiquitination and degradation. Does not mediate ubiquitination of isoform p16-INK4a of CDKN2A. Also catalyzes ubiquitination of NAE1 and SMARCE1, leading to their degradation. Ubiquitination and degradation of target proteins is regulated by interaction with proteins such as MYC, TRADD or SMARCC1, which disrupt the interaction between TRIP12 and target proteins. Acts as a key regulator of DNA damage response by acting as a suppressor of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites, thereby acting as a guard against excessive spreading of ubiquitinated chromatin at damaged chromosomes.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0005654::nucleoplasm confident no hit no match psy13396 328 Q24317::DNA primase small subunit ::DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005658::alpha DNA polymerase:primase complex confident hh_1zt2_A_1::7-20,22-25,35-95,99-140,142-151,153-190 very confident psy11497 69 Q4V8K2::Beta-catenin-like protein 1 ::Induces apoptosis in CHO cells.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0005681::spliceosomal complex confident no hit no match psy15016 131 Q9QXL2::Kinesin-like protein KIF21A ::Microtubule-binding motor protein probably involved in neuronal axonal transport. In vitro, has a plus-end directed motor activity.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005694::chromosome confident rp_2dfs_A_1::2-102 portable psy15596 149 A4IFD2::Forkhead box protein P1 ::Transcriptional repressor that plays an important role in the specification and differentiation of lung epithelium. Can act with CTBP1 to synergistically repress transcription but CTPBP1 is not essential. Essential transcriptional regulator of B-cell development.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0005730::nucleolus very confident hh_4i1l_A_1::56-140 very confident psy12529 39 A6VZN8::Acetyl-coenzyme A synthetase ::::Marinomonas sp. (strain MWYL1) (taxid: 400668) confident no hit no match no hit no match GO:0005730::nucleolus confident hh_1pg4_A_1::1-34 very confident psy13564 323 B2RS91::RNA polymerase I-specific transcription initiation factor RRN3 ::Required for efficient transcription initiation by RNA polymerase I. Required for the formation of the competent preinitiation complex (PIC). Dissociates from pol I as a consequence of transcription. In vitro, cannot activate transcription in a subsequent transcription reaction.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005730::nucleolus confident hh_3tj1_A_1::2-54,98-181,184-234,236-289 very confident psy13560 629 Q12824::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 ::Core component of the BAF (hSWI/SNF) complex. This ATP-dependent chromatin-remodeling complex plays important roles in cell proliferation and differentiation, in cellular antiviral activities and inhibition of tumor formation. The BAF complex is able to create a stable, altered form of chromatin that constrains fewer negative supercoils than normal. This change in supercoiling would be due to the conversion of up to one-half of the nucleosomes on polynucleosomal arrays into asymmetric structures, termed altosomes, each composed of 2 histones octamers. Stimulates in vitro the remodeling activity of SMARCA4/BRG1/BAF190A. Involved in activation of CSF1 promoter. Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth (By similarity). Plays a key role in cell-cycle control and causes cell cycle arrest in G0/G1. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005730::nucleolus confident rp_1vt4_I_1::1-23,41-89,93-105,107-123,129-147,159-171,180-210,214-222,224-240,243-247,254-263,265-272,274-275,280-289,291-294,301-323,344-387,396-423,428-435,437-439,449-455,457-491,498-502,504-515,520-522,525-533,549-557,566-566,584-625 portable psy13491 69 Q6NVP7::Polyadenylate-binding protein 2 ::Involved in the 3'-end formation of mRNA precursors (pre-mRNA) by the addition of a poly(A) tail of 200-250 nt to the upstream cleavage product. Stimulates poly(A) polymerase (PAPOLA) conferring processivity on the poly(A) tail elongation reaction and controls also the poly(A) tail length. Increases the affinity of poly(A) polymerase for RNA. Binds to poly(A) and to poly(G) with high affinity. May protect the poly(A) tail from degradation.::Xenopus tropicalis (taxid: 8364) confident no hit no match no hit no match GO:0005730::nucleolus very confident hh_2jwn_A_1::3-39 very confident psy13018 68 Q6P2Z6::60S ribosomal export protein NMD3 ::Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit.::Xenopus tropicalis (taxid: 8364) confident no hit no match no hit no match GO:0005730::nucleolus confident no hit no match psy34 190 Q7TNY1::BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 ::Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex involved in regulation of cytoskeleton structure. The BCR(BACURD2) E3 ubiquitin ligase complex mediates the ubiquitination of RHOA, leading to its degradation by the proteasome, thereby regulating the actin cytoskeleton and cell migration. Its interaction with RHOB may regulate apoptosis (By similarity). May enhance the PCNA-dependent DNA polymerase delta activity.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0005730::nucleolus very confident rp_3drx_A_1::1-65 portable psy3064 61 Q86XN8::RNA-binding protein MEX3D ::RNA binding protein, may be involved in post-transcriptional regulatory mechanisms.::Homo sapiens (taxid: 9606) very confident no hit no match no hit no match GO:0005730::nucleolus very confident no hit no match psy173 130 Q8BN58::Rho GTPase-activating protein 28 ::GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005730::nucleolus confident hh_2dky_A_1::44-105 portable psy17720 80 Q9CY21::Uncharacterized methyltransferase WBSCR22 ::Methyltransferase that may act on DNA.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005730::nucleolus confident hh_1xdz_A_1::2-45,48-56 portable psy9794 255 Q9Y4A5::Transformation/transcription domain-associated protein ::Adapter protein, which is found in various multiprotein chromatin complexes with histone acetyltransferase activity (HAT), which gives a specific tag for epigenetic transcription activation. Component of the NuA4 histone acetyltransferase complex which is responsible for acetylation of nucleosomal histones H4 and H2A. Plays a central role in MYC transcription activation, and also participates in cell transformation by MYC. Required for p53/TP53-, E2F1- and E2F4-mediated transcription activation. Also involved in transcription activation mediated by the adenovirus E1A, a viral oncoprotein that deregulates transcription of key genes. Probably acts by linking transcription factors such as E1A, MYC or E2F1 to HAT complexes such as STAGA thereby allowing transcription activation. Probably not required in the steps following histone acetylation in processes of transcription activation. May be required for the mitotic checkpoint and normal cell cycle progression.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005730::nucleolus confident hh_1qgr_A_2::102-134,136-156,158-172,174-245 portable psy13226 218 no hit no match no hit no match no hit no match GO:0005730::nucleolus confident rp_1g8x_A_1::13-165,181-207 portable psy3715 179 B1WQB7::Nucleoside diphosphate kinase ::Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.::Cyanothece sp. (strain ATCC 51142) (taxid: 43989) portable no hit no match no hit no match GO:0005737::cytoplasm confident hh_4fkx_A_1::20-72,75-119 very confident psy13569 118 P27671::Ras-specific guanine nucleotide-releasing factor 1 ::Promotes the exchange of Ras-bound GDP by GTP.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005737::cytoplasm confident hh_1fao_A_1::61-116 confident psy7646 301 Q14671::Pumilio homolog 1 ::Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3'-UTR of mRNA targets. May be required to support proliferation and self-renewal of stem cells.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005737::cytoplasm confident no hit no match psy5717 351 Q24UI6::Translation initiation factor IF-2 ::One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.::Desulfitobacterium hafniense (strain Y51) (taxid: 138119) portable no hit no match no hit no match GO:0005737::cytoplasm confident no hit no match psy9418 2775 Q28658::Small proline-rich protein 3 ::Can serve as a substrate in transglutaminase-catalyzed cross linking reactions and can function as a cross-linked envelope precursor.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match no hit no match GO:0005737::cytoplasm confident no hit no match psy13607 245 Q59A32::Trifunctional purine biosynthetic protein adenosine-3 ::::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0005737::cytoplasm confident rp_1meo_A_1::131-234 very confident psy18005 135 Q641Y5::Ubiquitin-like modifier-activating enzyme ATG7 ::Functions as an E1 enzyme essential for multisubstrates such as ATG8-like proteins and ATG12. Forms intermediate conjugates with ATG8-like proteins (GABARAP, GABARAPL1, GABARAPL2 or MAP1LC3A). PE-conjugation to ATG8-like proteins is essential for autophagy. Also acts as an E1 enzyme for ATG12 conjugation to ATG5 and ATG3.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0005737::cytoplasm confident hh_3t7h_A_1::9-109,113-113,116-135 very confident psy12362 92 Q6PHQ8::N-alpha-acetyltransferase 35, NatC auxiliary subunit ::Component of NAA50-NAA35 complex, which probably displays alpha (N-terminal) acetyltransferase activity. Regulates proliferation of smooth muscle cells.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005737::cytoplasm confident no hit no match psy973 167 Q7Z5Y7::BTB/POZ domain-containing protein KCTD20 ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005737::cytoplasm confident no hit no match psy964 154 Q80X66::BTB/POZ domain-containing protein 10 ::::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005737::cytoplasm very confident no hit no match psy18230 112 Q8NEL9::Phospholipase DDHD1 ::Probable phospholipase that hydrolyzes phosphatidic acid. The different isoforms may change the substrate specificity.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005737::cytoplasm confident rp_1vt4_I_1::12-22,27-33,37-39,43-44,54-74,76-104 portable psy15195 232 Q9NB71::E3 ubiquitin-protein ligase highwire ::E3 ubiquitin-protein ligases mediate ubiquitination and subsequent proteasomal degradation of target proteins. Has a role during synaptogenesis; negative regulator of synaptic growth.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0005737::cytoplasm confident rp_1vt4_I_1::27-37,40-47,49-58,65-111,125-178,183-211,213-220 portable psy688 267 no hit no match no hit no match no hit no match GO:0005737::cytoplasm confident no hit no match psy13437 80 O88884::A-kinase anchor protein 1, mitochondrial ::Binds to type I and II regulatory subunits of protein kinase A and anchors them to the cytoplasmic face of the mitochondrial outer membrane.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0005739::mitochondrion confident hh_2diq_A_1::1-14,16-64 very confident psy14701 136 Q2HJI2::NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 ::Essential factor for the assembly of mitochondrial NADH:ubiquinone oxidoreductase complex (complex I).::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0005739::mitochondrion confident hh_3cpk_A_1::2-5,7-59,62-109 very confident psy13599 120 Q75QN6::Dual specificity protein phosphatase PHS1 ::Probable dual specificity phosphatase that binds and dephosphorylates MPK18, modulating the organization and dynamics of cortical microtubules. Acts as negative regulator of abscisic acid (ABA) signaling during seed germination and light-induced stomata aperture.::Arabidopsis thaliana (taxid: 3702) confident no hit no match no hit no match GO:0005739::mitochondrion confident no hit no match psy1518 210 Q9JIK9::28S ribosomal protein S34, mitochondrial ::::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005739::mitochondrion confident rp_1vt4_I_1::49-72,77-177,180-192,195-206,208-210 portable psy1519 210 Q9JIK9::28S ribosomal protein S34, mitochondrial ::::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005739::mitochondrion confident rp_1vt4_I_1::49-72,77-177,180-192,195-206,208-210 portable psy16987 110 Q9V3X5::Transmembrane and TPR repeat-containing protein CG4341 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005739::mitochondrion confident no hit no match psy13494 143 Q5BJN5::Mitochondrial intermembrane space import and assembly protein 40 ::Required for the import and folding of small cysteine-containing proteins (small Tim) in the mitochondrial intermembrane space (IMS). Probably acts by forming a redox cycle with GFER/ERV1 that involves a disulfide relay system. Precursor proteins to be imported into the IMS are translocated in their reduced form into the mitochondria. The oxidized form of MIA40 forms a transient intermolecular disulfide bridge with the reduced precursor protein, resulting in oxidation of the precursor protein that now contains an intramolecular disulfide bond and is able to undergo folding in the IMS.::Rattus norvegicus (taxid: 10116) very confident no hit no match no hit no match GO:0005758::mitochondrial intermembrane space confident hh_2k3j_A_1::1-113 very confident psy1354 118 P51530::DNA replication ATP-dependent helicase/nuclease DNA2 ::May function in chromosomal DNA replication.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005760::gamma DNA polymerase complex confident hh_2xzl_A_1::2-91,101-111 very confident psy12464 67 Q7K4B6::Transmembrane and TPR repeat-containing protein CG4050 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005783::endoplasmic reticulum confident no hit no match psy1126 93 Q9D8V0::Minor histocompatibility antigen H13 ::Catalyzes intramembrane proteolysis of some signal peptides after they have been cleaved from a preprotein, resulting in the release of the fragment from the ER membrane into the cytoplasm. Required to generate lymphocyte cell surface (HLA-E) epitopes derived from MHC class I signal peptides. Involved in the intramembrane cleavage of the integral membrane protein PSEN1 (By similarity). May play a role in graft rejection.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005783::endoplasmic reticulum confident no hit no match psy13517 209 Q8NBL1::Protein O-glucosyltransferase 1 ::UDP-glucosyltransferase.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005788::endoplasmic reticulum lumen confident hh_2jjm_A_1::81-104,131-146,148-196 portable psy13516 284 Q8NBL1::Protein O-glucosyltransferase 1 ::UDP-glucosyltransferase.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005788::endoplasmic reticulum lumen confident no hit no match psy13390 245 P61105::Ras-related protein Rab-2A ::Required for protein transport from the endoplasmic reticulum to the Golgi complex.::Canis familiaris (taxid: 9615) very confident no hit no match no hit no match GO:0005789::endoplasmic reticulum membrane very confident bp_2a5j_A_1::100-235 very confident psy13563 577 P29844::Heat shock 70 kDa protein cognate 3 ::Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.::Drosophila melanogaster (taxid: 7227) very confident no hit no match no hit no match GO:0005793::endoplasmic reticulum-Golgi intermediate compartment confident hh_1dkg_D_1::2-61,64-64,69-140,142-278,280-305 very confident psy13565 182 Q39043::Mediator of RNA polymerase II transcription subunit 37f ::In cooperation with other chaperones, Hsp70s stabilize preexistent proteins against aggregation and mediate the folding of newly translated polypeptides in the cytosol as well as within organelles. These chaperones participate in all these processes through their ability to recognize nonnative conformations of other proteins. They bind extended peptide segments with a net hydrophobic character exposed by polypeptides during translation and membrane translocation, or following stress-induced damage.::Arabidopsis thaliana (taxid: 3702) very confident no hit no match no hit no match GO:0005793::endoplasmic reticulum-Golgi intermediate compartment very confident hh_1dkg_D_1::2-164 very confident psy13568 485 O74824::GTP-binding protein gtr1 ::GTPase. Component of the GSE complex, a GTPase complex required for intracellular sorting of GAP1 out of the endosome.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident no hit no match no hit no match GO:0005794::Golgi apparatus confident no hit no match psy10949 163 Q1LYM3::Protein spire homolog 1 ::Acts as a actin nucleation factor, remains associated with the slow-growing pointed end of the new filament. Involved in vesicle transport processes providing a novel link between actin organization and intracellular transport.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0005794::Golgi apparatus confident hh_3mn7_S_1::36-59,61-76,102-143 very confident psy13557 170 Q4WZL8::Palmitoyltransferase pfa3 ::Palmitoyltransferase specific for VAC8. Palmitoylates VAC8 at one or more of its N-terminal cysteine residues, which is required for its proper membrane localization.::Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) portable no hit no match no hit no match GO:0005794::Golgi apparatus confident no hit no match psy2527 83 Q92562::Polyphosphoinositide phosphatase ::The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). In vitro, hydrolyzes all three D5-phosphorylated polyphosphoinositide substrates in the order PtdIns(4,5)P2 > PtdIns(3,5)P2 > PtdIns(3,4,5)P3. Plays a role in the biogenesis of endosome carrier vesicles (ECV) / multivesicular bodies (MVB) transport intermediates from early endosomes.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005794::Golgi apparatus confident no hit no match psy16431 87 Q9Y266::Nuclear migration protein nudC ::Plays a role in neurogenesis and neuronal migration (By similarity). Necessary for correct formation of mitotic spindles and chromosome separation during mitosis. Necessary for cytokinesis and cell proliferation.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005794::Golgi apparatus confident hh_1wfi_A_1::1-48 very confident psy5543 60 Q9PTE6::Protein-tyrosine sulfotransferase 1 ::Catalyzes the O-sulfation of tyrosine residues within acidic motifs of polypeptides.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0005802::trans-Golgi network confident rp_3ap1_A_1::14-55 very confident psy13546 109 O75000::60S ribosomal protein L12 ::This protein binds directly to 26S ribosomal RNA.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) confident no hit no match no hit no match GO:0005811::lipid particle very confident no hit no match psy5955 134 P19096::Fatty acid synthase ::Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005811::lipid particle confident bp_2vz8_A_1::1-61,64-95 very confident psy13425 224 P62083::40S ribosomal protein S7 ::Required for rRNA maturation.::Rattus norvegicus (taxid: 10116) very confident no hit no match no hit no match GO:0005811::lipid particle confident hh_3u5c_H_1::1-12,15-56,88-139,142-223 very confident psy14070 111 Q9UEY8::Gamma-adducin ::Membrane-cytoskeleton-associated protein that promotes the assembly of the spectrin-actin network. Binds to calmodulin.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005811::lipid particle confident no hit no match psy147 378 Q5BJH7::Protein YIF1B ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005813::centrosome confident rp_1m2v_B_1::2-22,29-53,59-111 portable psy15594 200 Q68FH0::Plakophilin-4 ::Plays a role as a regulator of Rho activity during cytokinesis. May play a role in junctional plaques.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0005813::centrosome confident hh_3l6x_A_1::1-43,77-95,97-136,155-174 very confident psy4920 111 Q6NUV0::Rab3 GTPase-activating protein catalytic subunit ::Probable catalytic subunit of a GTPase activating protein that has specificity for Rab3 subfamily. Rab3 proteins are involved in regulated exocytosis of neurotransmitters and hormones. Specifically converts active Rab3-GTP to the inactive form Rab3-GDP.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0005813::centrosome confident no hit no match psy3755 692 A4G647::Polyribonucleotide nucleotidyltransferase ::Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction.::Herminiimonas arsenicoxydans (taxid: 204773) very confident no hit no match no hit no match GO:0005829::cytosol very confident no hit no match psy13353 595 B1JYI9::Aspartate--tRNA ligase ::::Burkholderia cenocepacia (strain MC0-3) (taxid: 406425) very confident no hit no match no hit no match GO:0005829::cytosol confident hh_1c0a_A_1::1-114,116-267,269-417,423-443,445-469,471-590 very confident psy16018 89 O14908::PDZ domain-containing protein GIPC1 ::May be involved in G protein-linked signaling.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005829::cytosol confident hh_1xrx_A_1::66-88 portable psy16017 85 O14908::PDZ domain-containing protein GIPC1 ::May be involved in G protein-linked signaling.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005829::cytosol confident no hit no match psy17573 102 P00516::cGMP-dependent protein kinase 1 ::Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0005829::cytosol confident hh_2i0e_A_1::39-74,76-92 confident psy10490 121 P50851::Lipopolysaccharide-responsive and beige-like anchor protein ::May be involved in coupling signal transduction and vesicle trafficking to enable polarized secretion and/or membrane deposition of immune effector molecules.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005829::cytosol confident no hit no match psy13580 109 Q03684::Luminal-binding protein 4 ::Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.::Nicotiana tabacum (taxid: 4097) portable no hit no match no hit no match GO:0005829::cytosol confident hh_3qfu_A_1::19-91,93-102 very confident psy7868 136 Q08499::cAMP-specific 3',5'-cyclic phosphodiesterase 4D ::Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005829::cytosol confident no hit no match psy1352 399 Q16537::Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform ::The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005829::cytosol confident hh_2jak_A_1::36-265 very confident psy17601 64 Q2LZZ7::Serine/threonine-protein kinase tricorner ::Has an important role, with fry, in controlling cell structure and proliferation of a variety of polarized outgrowths including epidermal hairs, bristles, arista laterals, and dendrites. Affects cellular morphogenesis by regulating the expression of target genes that encode cytoskeleton-interacting proteins and not via the direct modification of the cytoskeleton. Maintains the integrity of epidermal hairs and is an essential component of the signaling pathway regulating dendritic branching of sensory neurons.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match no hit no match GO:0005829::cytosol confident hh_2vd5_A_1::24-63 very confident psy13321 144 Q5VU57::Cytosolic carboxypeptidase 6 ::Metallocarboxypeptidase that mediates deglutamylation of target proteins. Catalyzes the deglutamylation of polyglutamate side chains generated by post-translational polyglutamylation in proteins such as tubulins. Also removes gene-encoded polyglutamates from the carboxy-terminus of target proteins such as MYLK. Acts as a long-chain deglutamylase and specifically shortens long polyglutamate chains, while it is not able to remove the branching point glutamate, a process catalyzed by AGBL5/CCP5.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005829::cytosol confident hh_3l2n_A_1::60-65,67-96,98-110,112-125,128-136 very confident psy6854 148 Q6DRC3::Uncharacterized protein C21orf59 homolog ::::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0005829::cytosol confident no hit no match psy14775 129 Q6FVR6::UDP-N-acetylglucosamine transferase subunit ALG13 ::Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.::Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593) confident no hit no match no hit no match GO:0005829::cytosol confident hh_2jzc_A_1::2-128 very confident psy13019 87 Q6P2Z6::60S ribosomal export protein NMD3 ::Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit.::Xenopus tropicalis (taxid: 8364) confident no hit no match no hit no match GO:0005829::cytosol confident no hit no match psy2610 133 Q8C0D5::Elongation factor Tu GTP-binding domain-containing protein 1 ::Involved in the biogenesis of the 60S ribosomal subunit and translational activation of ribosomes. Together with SBDS, triggers the GTP-dependent release of EIF6 from 60S pre-ribosomes in the cytoplasm, thereby activating ribosomes for translation competence by allowing 80S ribosome assembly and facilitating EIF6 recycling to the nucleus, where it is required for 60S rRNA processing and nuclear export. Has low intrinsic GTPase activity. GTPase activity is increased by contact with 60S ribosome subunits.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005829::cytosol confident hh_1n0u_A_1::41-130 very confident psy17660 126 Q8CDK2::Cytosolic carboxypeptidase 2 ::Metallocarboxypeptidase that may play a role in the processing of tubulin.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005829::cytosol confident hh_4a37_A_1::20-56,58-85,88-99,106-117 very confident psy8271 65 Q8N5Z5::BTB/POZ domain-containing protein KCTD17 ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0005829::cytosol confident hh_3drx_A_1::2-32,34-65 very confident psy13383 105 Q9DB34::Charged multivesicular body protein 2a ::Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth factor receptors, lysosomal enzymes and lipids. The MVB pathway appears to require the sequential function of ESCRT-O, -I,-II and -III complexes. ESCRT-III proteins mostly dissociate from the invaginating membrane before the ILV is released. The ESCRT machinery also functions in topologically equivalent membrane fission events, such as the terminal stages of cytokinesis. ESCRT-III proteins are believed to mediate the necessary vesicle extrusion and/or membrane fission activities, possibly in conjunction with the AAA ATPase VPS4.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005829::cytosol confident hh_2gd5_A_1::4-6,8-61,66-92 confident psy6788 61 Q9EPN1::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005829::cytosol confident no hit no match psy11205 315 Q9TZD0::Lateral signaling target protein 2 ::Negative regulator of epidermal growth factor receptor (EGFR) signaling.::Caenorhabditis elegans (taxid: 6239) confident no hit no match no hit no match GO:0005829::cytosol confident rp_1vt4_I_1::32-36,39-51,53-63,71-81,90-93,95-155,159-200,207-235,238-261,267-286 portable psy7249 261 Q9VAW5::La-related protein ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005829::cytosol confident no hit no match psy14755 184 Q9VSF4::Probable deoxyhypusine synthase ::Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005829::cytosol confident hh_1rlz_A_1::17-52,81-169 very confident psy13511 88 no hit no match no hit no match no hit no match GO:0005829::cytosol confident hh_2x1d_A_1::2-29,31-77 confident psy13512 170 no hit no match no hit no match no hit no match GO:0005829::cytosol confident hh_2x1d_A_1::22-61,63-115,117-118,124-138,140-153 confident psy13344 155 O35218::Cleavage and polyadenylation specificity factor subunit 2 ::Component of the cleavage and polyadenylation specificity factor (CPSF) complex that play a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. Involved in the histone 3' end pre-mRNA processing.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0005847::mRNA cleavage and polyadenylation specificity factor complex confident hh_2ycb_A_1::19-38,40-82,84-150 very confident psy1246 161 Q9UKF5::Disintegrin and metalloproteinase domain-containing protein 29 ::May be involved in spermatogenesis and fertilization. Seems to be a non catalytic metalloprotease-like protein.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005856::cytoskeleton confident rp_1m2v_B_3::25-35,38-130,133-152 portable psy9520 675 P17025::Zinc finger protein 182 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005875::microtubule associated complex confident no hit no match psy13305 171 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005875::microtubule associated complex confident no hit no match psy13300 346 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005875::microtubule associated complex confident rp_1vt4_I_1::6-61,66-75,93-109,112-162,165-165,167-168,175-188,192-233,239-244,248-250,253-254,257-286,288-303,305-316 portable psy13304 205 Q24498::Ryanodine receptor 44F ::Intracellular calcium channel that is required for proper muscle function during embryonic development and may be essential for excitation-contraction coupling in larval body wall muscles.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005875::microtubule associated complex confident hh_2jjz_A_1::136-173 portable psy9931 237 no hit no match no hit no match no hit no match GO:0005882::intermediate filament confident no hit no match psy13500 396 Q09920::Iron transport multicopper oxidase fio1 ::Could be a iron transport multicopper oxidase, which is required for Fe(2+) high affinity uptake. May be required to oxidize Fe(2+) and release it from the transporter. Essential component of copper-dependent iron transport.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match no hit no match GO:0005886::plasma membrane confident hh_3zx1_A_1::23-37,57-73,75-86,89-96,100-147,153-157,160-216,218-227 very confident psy2868 289 Q8N1N5::Cysteine-rich PAK1 inhibitor ::Negative regulator of PAK1. It has been suggested that the lost of CRIPAK in breast tumors might contribute to hormonal independence.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0005886::plasma membrane confident rp_3v1v_A_1::135-159,163-249 portable psy8783 74 O61307::Teneurin-m ::Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-a to organize neuromuscular synapses. Function in olfactory synaptic partner matching; promotes homophilic cell adhesion between pre-synaptic olfactory receptor neurons (ORN) axons and post-synaptic projection neurons (PN) dendrites partner in the developing antennal lobe to form stable connections. Also required for peripheral axon growth cone guidance and target recognition of motor neurons.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005887::integral to plasma membrane confident no hit no match psy10561 73 O61307::Teneurin-m ::Involved in neural development, regulating the establishment of proper connectivity within the nervous system. Acts as a homophilic and heterophilic synaptic cell adhesion molecule that drives synapse assembly. Promotes bi-directional trans-synaptic signaling with ten-a to organize neuromuscular synapses. Function in olfactory synaptic partner matching; promotes homophilic cell adhesion between pre-synaptic olfactory receptor neurons (ORN) axons and post-synaptic projection neurons (PN) dendrites partner in the developing antennal lobe to form stable connections. Also required for peripheral axon growth cone guidance and target recognition of motor neurons.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005887::integral to plasma membrane confident hh_3kya_A_1::9-50 confident psy13469 74 P91645::Voltage-dependent calcium channel type A subunit alpha-1 ::Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, neurotransmitter release, gene expression, cell motility, cell division and cell death (By similarity). Probably encodes a dihydropyridine-insensitive current. Vital for survival to adulthood.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005891::voltage-gated calcium channel complex confident hh_4dxw_A_1::29-60 confident psy14833 63 Q94887::Neurexin-4 ::Seems to play a role in the formation and function of septate junctions. Septate junctions, which are the equivalent of vertebrates tight junctions, are characterized by regular arrays of transverse structures that span the intermembrane space and form a physical barrier to diffusion. Required for the blood-brain barrier formation.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005919::pleated septate junction confident hh_4ae2_A_1::1-44 portable psy12375 216 Q0KHY3::Extracellular domains-containing protein CG31004 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005920::smooth septate junction confident no hit no match psy12378 260 Q0KHY3::Extracellular domains-containing protein CG31004 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0005920::smooth septate junction confident no hit no match psy13598 163 P21932::Adenylate cyclase type 3 ::Mediates odorant detection (possibly) via modulation of intracellular cAMP concentration.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0006171::cAMP biosynthetic process confident no hit no match psy13602 107 P21932::Adenylate cyclase type 3 ::Mediates odorant detection (possibly) via modulation of intracellular cAMP concentration.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0006171::cAMP biosynthetic process very confident hh_1azs_A_1::20-106 very confident psy7859 455 P58281::Dynamin-like 120 kDa protein, mitochondrial ::Dynamin-like 120 kDa protein, form S1: Inactive form produced by cleavage at S1 position by OMA1 following stress conditions that induce loss of mitochondrial membrane potential, leading to negative regulation of mitochondrial fusion.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0006184::GTP catabolic process confident rp_1vt4_I_1::54-90,93-134,137-143,147-156,158-188,192-216,218-244,251-307,309-353,355-373,379-388,393-403 portable psy9733 86 P67827::Casein kinase I isoform alpha ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. It can phosphorylate a large number of proteins. Participates in Wnt signaling. Phosphorylates CTNNB1 at 'Ser-45'. May play a role in segregating chromosomes during mitosis.::Bos taurus (taxid: 9913) very confident no hit no match no hit no match GO:0006281::DNA repair very confident bp_3sv0_A_1::32-76 very confident psy13444 129 A6QPM3::Putative histone-lysine N-methyltransferase PRDM6 ::Putative histone methyltransferase that acts as a transcriptional repressor of smooth muscle gene expression. Promotes the transition from differentiated to proliferative smooth muscle by suppressing differentiation and maintaining the proliferative potential of vascular smooth muscle cells. Also plays a role in endothelial cells by inhibiting endothelial cell proliferation, survival and differentiation. It is unclear whether it has histone methyltransferase activity in vivo. According to some authors, it does not act as a histone methyltransferase by itself and represses transcription by recruiting EHMT2/G9a. According to others, it possesses histone methyltransferase activity when associated with other proteins and specifically methylates 'Lys-20' of histone H4 in vitro. 'Lys-20' methylation represents a specific tag for epigenetic transcriptional repression.::Bos taurus (taxid: 9913) portable no hit no match no hit no match GO:0006325::chromatin organization confident hh_2kmk_A_1::36-50,52-61,68-124 very confident psy11715 118 P0C606::SAGA-associated factor 29 homolog ::Involved in transcriptional regulation, through association with histone acetyltransferase (HAT) SAGA-type complexes like the TFTC-HAT, ATAC or STAGA complexes. Specifically recognizes and binds methylated 'Lys-4' of histone H3 (H3K4me), with a preference for trimethylated form (H3K4me3). In the SAGA-type complexes, required to recruit complexes to H3K4me. May be involved in MYC-mediated oncogenic transformation.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0006338::chromatin remodeling confident hh_3mea_A_1::86-118 very confident psy5120 138 Q9W0T1::Nucleosome-remodeling factor subunit NURF301 ::Histone-binding component of NURF (nucleosome remodeling factor), a complex which catalyzes ATP-dependent nucleosome sliding and facilitates transcription of chromatin. Specifically recognizes H3 tails trimethylated on 'Lys-4' (H3K4me3), which mark transcription start sites of virtually all active genes. Required for homeotic gene expression, proper larval blood cell development, normal male X chromosome morphology, ecdysteroid signaling and metamorphosis.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0006338::chromatin remodeling confident rp_1vt4_I_1::19-47,59-81 portable psy6889 166 P16110::Galectin-3 ::Galactose-specific lectin which binds IgE. May mediate with the alpha-3, beta-1 integrin the stimulation by CSPG4 of endothelial cells migration. Together with DMBT1, required for terminal differentiation of columnar epithelial cells during early embryogenesis. In the nucleus: acts as a pre-mRNA splicing factor. Involved in acute inflammatory responses including neutrophil activation and adhesion, chemoattraction of monocytes macrophages, opsonization of apoptotic neutrophils, and activation of mast cells.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0006355::regulation of transcription, DNA-dependent confident no hit no match psy12694 112 P33244::Nuclear hormone receptor FTZ-F1 ::Acts as a cofactor to fushi tarazu (ftz). Facilitates the binding of ftz to DNA. Binds the sequence element 5'-YCYYGGYCR-3' in the zebra element of ftz. Probably also functions as a receptor for a yet unknown ligand.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0006357::regulation of transcription from RNA polymerase II promoter confident rp_1qzv_F_1::63-67,73-83,85-90 portable psy12130 67 no hit no match no hit no match no hit no match GO:0006357::regulation of transcription from RNA polymerase II promoter confident no hit no match psy13451 522 Q92696::Geranylgeranyl transferase type-2 subunit alpha ::Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC, -XCXC and -CCXX C-terminal, such as RAB1A, RAB3A and RAB5A respectively.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0006464::cellular protein modification process confident hh_3dss_A_1::1-116,118-245,260-260,268-272,287-293,298-323,326-362 very confident psy4021 65 Q9VRP9::E3 ubiquitin-protein ligase Bre1 ::E3 ubiquitin-protein ligase that mediates monoubiquitination of 'Lys-117' of histone H2B. H2B 'Lys-117' ubiquitination gives a specific tag for epigenetic transcriptional activation and is also prerequisite for histone H3 'Lys-4' and 'Lys-79' methylation. It thereby plays a central role in histone code and gene regulation. Required for the expression of Notch target genes in development by affecting the levels of Su(H) in imaginal disk cells and stimulating the Su(H)-mediated transcription of Notch-specific genes.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0006511::ubiquitin-dependent protein catabolic process confident hh_3m91_A_1::4-35 portable psy14666 256 P55036::26S proteasome non-ATPase regulatory subunit 4 ::Binds and presumably selects ubiquitin-conjugates for destruction. Displays selectivity for longer polyubiquitin chains. Modulates intestinal fluid secretion.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0006521::regulation of cellular amino acid metabolic process confident hh_2x5n_A_1::1-136,138-149,152-155 very confident psy1282 487 P0CP50::PAB-dependent poly(A)-specific ribonuclease subunit PAN3 ::Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex involved in cytoplasmic mRNA turnover. PAN specifically shortens poly(A) tails of RNA when the poly(A) stretch is bound by polyadenylate-binding protein PAB1. Deadenylation of the 3'-tail to a length that is too short to bind PAB1 induces mRNA decay. May also be involved in post-transcriptional maturation of mRNA poly(A) tails. PAN3 acts as a positive regulator for PAN activity, recruiting PAN2 to mRNA via its interaction with PAB1.::Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) (taxid: 214684) confident no hit no match no hit no match GO:0006605::protein targeting confident rp_1vt4_I_1::113-120,123-189,191-232,239-370,373-381,388-413,416-419,423-433,441-459,461-469 portable psy53 78 Q5ZLT0::Exportin-7 ::Mediates the nuclear export of proteins (cargos) with broad substrate specificity.::Gallus gallus (taxid: 9031) confident no hit no match no hit no match GO:0006611::protein export from nucleus confident no hit no match psy2758 72 Q6DG38::Glycerol-3-phosphate acyltransferase 3 ::Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate, an essential step in glycerolipid biosynthesis.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0006637::acyl-CoA metabolic process confident no hit no match psy9498 240 no hit no match no hit no match no hit no match GO:0006796::phosphate-containing compound metabolic process confident rp_3h0g_A_1::30-90,93-118,123-146,151-222 portable psy13712 63 no hit no match no hit no match no hit no match GO:0006821::chloride transport confident no hit no match psy1348 87 Q5HZE0::Mitochondrial carnitine/acylcarnitine carrier protein CACL ::Has palmitoylcarnitine transporting activity.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0006862::nucleotide transport confident hh_2lck_A_2::2-86 very confident psy13574 145 P26434::Sodium/hydrogen exchanger 4 ::Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction. May play a specialized role in the kidney in rectifying cell volume in response to extreme fluctuations of hyperosmolar-stimulated cell shrinkage. Is relatively amiloride and ethylisopropylamiloride (EIPA) insensitive. Can be activated under conditions of hyperosmolar-induced cell shrinkage in a sustained intracellular acidification-dependence manner. Activated by 4,4'-diisothiocyanostilbene-2,2'-disulfonic acid (DIDS) in a sustained intracellular acidification-dependence manner. Affects potassium/proton exchange as well as sodium/proton and lithium/proton exchange. In basolateral cell membrane, participates in homeostatic control of intracellular pH, and may play a role in proton extrusion in order to achieve transepithelial HCO3(-) secretion. In apical cell membrane may be involved in mediating sodium absorption. Requires for normal levels of gastric acid secretion, secretory membrane development, parietal cell maturation and/or differentiation and at least secondarily for chief cell differentiation.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0006873::cellular ion homeostasis confident hh_2bec_B_1::25-67 very confident psy11606 111 Q5F2E8::Serine/threonine-protein kinase TAO1 ::Serine/threonine-protein kinase involved in various processes such as p38/MAPK14 stress-activated MAPK cascade, DNA damage response and regulation of cytoskeleton stability. Phosphorylates MAP2K3, MAP2K6 and MARK2. Acts as an activator of the p38/MAPK14 stress-activated MAPK cascade by mediating phosphorylation and subsequent activation of the upstream MAP2K3 and MAP2K6 kinases. Involved in G-protein coupled receptor signaling to p38/MAPK14. In response to DNA damage, involved in the G2/M transition DNA damage checkpoint by activating the p38/MAPK14 stress-activated MAPK cascade, probably by mediating phosphorylation of MAP2K3 and MAP2K6. Acts as a regulator of cytoskeleton stability by phosphorylating 'Thr-208' of MARK2, leading to activate MARK2 kinase activity and subsequent phosphorylation and detachment of MAPT/TAU from microtubules. Also acts as a regulator of apoptosis: regulates apoptotic morphological changes, including cell contraction, membrane blebbing and apoptotic bodies formation via activation of the MAPK8/JNK cascade.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0006915::apoptotic process confident no hit no match psy16924 94 Q9BX46::RNA-binding protein 24 ::Plays a role in myogenic differentiation by regulating MYOG levels. Binds to the 3'-UTR of MYOG mRNA and regulates its stability.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0006977::DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest confident hh_2cqd_A_1::2-35,37-43 confident psy14661 202 Q6DHB1::Dynein light chain 1, axonemal ::::Danio rerio (taxid: 7955) very confident no hit no match no hit no match GO:0007018::microtubule-based movement confident hh_1ds9_A_1::25-202 very confident psy13603 133 P21932::Adenylate cyclase type 3 ::Mediates odorant detection (possibly) via modulation of intracellular cAMP concentration.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0007165::signal transduction confident hh_1azs_A_1::36-65,69-97,99-133 confident psy6177 870 no hit no match no hit no match no hit no match GO:0007275::multicellular organismal development confident no hit no match psy11495 81 P42345::Serine/threonine-protein kinase mTOR ::Serine/threonine protein kinase which is a central regulator of cellular metabolism, growth and survival in response to hormones, growth factors, nutrients, energy and stress signals. Functions as part of 2 structurally and functionally distinct signaling complexes mTORC1 and mTORC2 (mTOR complex 1 and 2). Activated mTORC1 up-regulates protein synthesis by phosphorylating key regulators of mRNA translation and ribosome synthesis. This includes phosphorylation of EIF4EBP1 and release of its inhibition toward the elongation initiation factor 4E (eiF4E). Moreover, phosphorylates and activates RPS6KB1 and RPS6KB2 that promote protein synthesis by modulating the activity of their downstream targets including ribosomal protein S6, eukaryotic translation initiation factor EIF4B and the inhibitor of translation initiation PDCD4. Regulates ribosome synthesis by activating RNA polymerase III-dependent transcription through phosphorylation and inhibition of MAF1 a RNA polymerase III-repressor. In parallel to protein synthesis, also regulates lipid synthesis through SREBF1/SREBP1 and LPIN1. To maintain energy homeostasis mTORC1 may also regulate mitochondrial biogenesis through regulation of PPARGC1A. mTORC1 also negatively regulates autophagy through phosphorylation of ULK1. Under nutrient sufficiency, phosphorylates ULK1 at 'Ser-758', disrupting the interaction with AMPK and preventing activation of ULK1. Also prevents autophagy through phosphorylation of the autophagy inhibitor DAP. mTORC1 exerts a feedback control on upstream growth factor signaling that includes phosphorylation and activation of GRB10 a INSR-dependent signaling suppressor. Among other potential targets mTORC1 may phosphorylate CLIP1 and regulate microtubules. As part of the mTORC2 complex MTOR may regulate other cellular processes including survival and organization of the cytoskeleton. Plays a critical role in the phosphorylation at 'Ser-473' of AKT1, a pro-survival effector of phosphoinositide 3-kinase, facilitating its activation by PDK1. mTORC2 may regulate the actin cytoskeleton, through phosphorylation of PRKCA, PXN and activation of the Rho-type guanine nucleotide exchange factors RHOA and RAC1A or RAC1B. mTORC2 also regulates the phosphorylation of SGK1 at 'Ser-422'.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0007281::germ cell development confident no hit no match psy7374 106 Q9ES03::T-box transcription factor TBX20 ::Probable transcriptional regulator involved in developmental processes.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0007389::pattern specification process confident hh_1h6f_A_1::73-105 very confident psy6232 100 no hit no match no hit no match no hit no match GO:0007443::Malpighian tubule morphogenesis confident no hit no match psy11111 84 Q9W2X7::Protein yippee-like CG15309 ::::Drosophila melanogaster (taxid: 7227) very confident no hit no match no hit no match GO:0007476::imaginal disc-derived wing morphogenesis confident no hit no match psy7937 152 Q7PHR1::Kinesin-like protein unc-104 ::Required for presynaptic maturation, has a role in axonal transport of dense-core vesicles carrying synaptic vesicle precursors, components required for the morphological transformation of axonal growth cones to mature boutons.::Anopheles gambiae (taxid: 7165) confident no hit no match no hit no match GO:0007528::neuromuscular junction development confident no hit no match psy15147 100 Q05B21::Vesicular glutamate transporter 1 ::Mediates the uptake of glutamate into synaptic vesicles at presynaptic nerve terminals of excitatory neural cells.::Xenopus tropicalis (taxid: 8364) portable no hit no match no hit no match GO:0008021::synaptic vesicle confident no hit no match psy2991 71 no hit no match no hit no match no hit no match GO:0008188::neuropeptide receptor activity confident no hit no match psy16484 75 Q8K1N1::Calcium-independent phospholipase A2-gamma ::Calcium-independent phospholipase A2, which catalyzes the hydrolysis of the sn-2 position of glycerophospholipids, PtdSer and to a lower extent PtdCho. Cleaves membrane phospholipids.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0008219::cell death confident hh_1oxw_A_1::12-74 confident psy367 919 Q05481::Zinc finger protein 91 ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0008270::zinc ion binding confident no hit no match psy3121 190 Q9C0B0::RING finger protein unkempt homolog ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0008270::zinc ion binding confident no hit no match psy14251 76 no hit no match no hit no match no hit no match GO:0008283::cell proliferation confident hh_3b8z_A_1::26-37,40-60 portable psy6845 67 Q8STF6::Dystrophin-like protein 1 ::Together with dys-1 and hlh-1, participates in a common muscular function.::Caenorhabditis elegans (taxid: 6239) confident no hit no match no hit no match GO:0008307::structural constituent of muscle confident hh_3f0w_A_1::7-12,14-43 portable psy3569 228 Q8CD54::Piezo-type mechanosensitive ion channel component 2 ::Component of mechanosensitive channel required for rapidly adaptating mechanically activated (MA) currents in DRG neurons. Overexpression in multiple cell lines generates robust mechanosensitive cation currents that are non-selective, exhibit a linear current voltage relationship, and are sensitive to ruthenium red and gadolinium.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0008381::mechanically-gated ion channel activity confident no hit no match psy14619 344 P12259::Coagulation factor V ::Central regulator of hemostasis. It serves as a critical cofactor for the prothrombinase activity of factor Xa that results in the activation of prothrombin to thrombin.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0009277::fungal-type cell wall confident rp_1vt4_I_1::48-54,56-60,63-117,127-132,137-179,181-248,251-273 portable psy4365 1023 Q9C0Y2::Putative cell agglutination protein PB2C8.01 ::Cell-type specific protein which may be involved in agglutination during conjugation or other aspects of colony formation.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match no hit no match GO:0009277::fungal-type cell wall confident rp_1vt4_I_1::639-667,669-684,686-689,694-716,718-756,758-773,778-801,806-810,812-814,816-906,913-997,1005-1009,1012-1018 portable psy738 62 Q10473::Polypeptide N-acetylgalactosaminyltransferase 1 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b and Muc7.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0009312::oligosaccharide biosynthetic process confident hh_1xhb_A_1::1-60 very confident psy15020 89 Q6WV19::Polypeptide N-acetylgalactosaminyltransferase 2 ::Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0009312::oligosaccharide biosynthetic process confident hh_2ffu_A_1::6-72 very confident psy11018 121 Q58DK1::Carnitine O-palmitoyltransferase 1, muscle isoform ::::Bos taurus (taxid: 9913) portable no hit no match no hit no match GO:0009617::response to bacterium confident hh_2le3_A_1::1-42 very confident psy12663 107 Q98T89::Twisted gastrulation protein homolog 1 ::May be involved in dorsoventral axis formation. Seems to antagonize BMP signaling by forming ternary complexes with CHRD and BMPs, thereby preventing BMPs from binding to their receptors. In addition to the anti-BMP function, also has pro-BMP activity, partly mediated by cleavage and degradation of CHRD, which releases BMPs from ternary complexes. May be an important modulator of BMP-regulated cartilage development and chondrocyte differentiation. May play a role in thymocyte development.::Gallus gallus (taxid: 9031) confident no hit no match no hit no match GO:0009790::embryo development confident no hit no match psy17968 174 Q6H236::Paternally-expressed gene 3 protein ::Induces apoptosis in cooperation with SIAH1A. Acts as a mediator between p53/TP53 and BAX in a neuronal death pathway that is activated by DNA damage. Acts synergistically with TRAF2 and inhibits TNF induced apoptosis through activation of NF-kappa-B.::Bos taurus (taxid: 9913) portable no hit no match no hit no match GO:0009986::cell surface confident no hit no match psy3095 106 Q05017::Phospholipase B1, membrane-associated ::Membrane-associated phospholipase. Exhibits a calcium-independent broad substrate specificity including phospholipase A2/lysophospholipase activity. Can convert phosphatidylcholine to fatty acids and glycerophosphocholine. Could be involved in uptake of dietary lipids, possibly including long chain retinyl esters.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match no hit no match GO:0009987::cellular process confident hh_3dc7_A_1::38-75 portable psy15827 101 Q9VBW3::Tyrosine kinase receptor Cad96Ca ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0009987::cellular process confident hh_2h8h_A_1::47-99 very confident psy5923 88 P15372::Phosrestin-2 ::Regulates photoreceptor cell deactivation. Arr1 and Arr2 proteins are mediators of rhodopsin inactivation and are essential for the termination of the phototransduction cascade.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0010468::regulation of gene expression confident hh_3ugu_A_1::8-68,70-88 very confident psy13739 89 no hit no match no hit no match no hit no match GO:0010468::regulation of gene expression confident rp_3dzy_A_1::2-84 portable psy13558 73 Q54PY7::Probable mitochondrial 2-oxoglutarate/malate carrier protein ::Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Catalyzes the transport of 2-oxoglutarate across the inner mitochondrial membrane in an electroneutral exchange for malate or other dicarboxylic acids, and plays an important role in several metabolic processes, including the malate-aspartate shuttle, the oxoglutarate/isocitrate shuttle, in gluconeogenesis from lactate, and in nitrogen metabolism.::Dictyostelium discoideum (taxid: 44689) confident no hit no match no hit no match GO:0015116::sulfate transmembrane transporter activity confident hh_2lck_A_1::6-59 very confident psy14762 136 Q9UBX3::Mitochondrial dicarboxylate carrier ::Involved in translocation of malonate, malate and succinate in exchange for phosphate, sulfate, sulfite or thiosulfate across mitochondrial inner membrane.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0015116::sulfate transmembrane transporter activity confident hh_2lck_A_1::3-128 very confident psy13578 94 Q9Z0X2::Sodium/hydrogen exchanger 5 ::Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0015385::sodium:hydrogen antiporter activity confident hh_2kbv_A_1::69-94 confident psy13590 90 P50482::Sodium/hydrogen exchanger 2 ::Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Seems to play an important role in colonic sodium absorption.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match no hit no match GO:0015386::potassium:hydrogen antiporter activity confident hh_1y4e_A_1::37-62 very confident psy3495 266 P16258::Oxysterol-binding protein 1 ::Binds cholesterol and a range of oxysterols. Cholesterol binding promotes the formation of a complex with PP2A and a tyrosine phosphatase which dephosphorylate ERK1/2, whereas 25-hydroxycholesterol causes its disassembly. Regulates cholesterol efflux by decreasing ABCA1 stability.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match no hit no match GO:0015485::cholesterol binding confident hh_4hpq_C_1::18-110,112-134 portable psy15167 75 Q5RC52::Testin ::Scaffold protein that may play a role in cell adhesion, cell spreading and in the reorganization of the actin cytoskeleton. Plays a role in the regulation of cell proliferation. May act as a tumor suppressor.::Pongo abelii (taxid: 9601) portable no hit no match no hit no match GO:0015629::actin cytoskeleton confident no hit no match psy13529 75 Q80T11::Usher syndrome type-1G protein homolog ::Required for normal development and maintenance of cochlear hair cell bundles. Anchoring/scaffolding protein that is a part of the functional network formed by USH1C, USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear hair cells. Required for normal hearing.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0015629::actin cytoskeleton confident hh_2jab_A_1::4-75 very confident psy2914 158 Q8IVL1::Neuron navigator 2 ::Possesses 3' to 5' helicase activity and exonuclease activity. Involved in neuronal development, specifically in the development of different sensory organs.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0015630::microtubule cytoskeleton confident hh_3trt_A_1::52-99 portable psy13600 186 Q9UHW9::Solute carrier family 12 member 6 ::Mediates electroneutral potassium-chloride cotransport. May be activated by cell swelling. May contribute to cell volume homeostasis in single cells.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0015698::inorganic anion transport confident no hit no match psy12275 232 no hit no match no hit no match no hit no match GO:0016020::membrane confident rp_1ab8_A_1::123-130,132-163 portable psy7032 136 O62852::Short transient receptor potential channel 5 ::Thought to form a receptor-activated non-selective calcium permeant cation channel. Probably is operated by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases or G-protein coupled receptors. Has also been shown to be calcium-selective. May also be activated by intracellular calcium store depletion.::Oryctolagus cuniculus (taxid: 9986) portable no hit no match no hit no match GO:0016021::integral to membrane confident no hit no match psy13897 86 Q80U30::Protein CLEC16A ::::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0016021::integral to membrane confident no hit no match psy13896 171 Q80U30::Protein CLEC16A ::::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0016021::integral to membrane confident no hit no match psy7368 93 Q8R420::ATP-binding cassette sub-family A member 3 ::Plays an important role in the formation of pulmonary surfactant, probably by transporting lipids such as cholesterol.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0016023::cytoplasmic membrane-bounded vesicle confident no hit no match psy6382 125 Q9Z254::PDZ domain-containing protein GIPC1 ::May be involved in G protein-linked signaling.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0016023::cytoplasmic membrane-bounded vesicle confident no hit no match psy1631 77 Q9Y6J0::Calcineurin-binding protein cabin-1 ::May be required for replication-independent chromatin assembly. May serve as a negative regulator of T-cell receptor (TCR) signaling via inhibition of calcineurin. Inhibition of activated calcineurin is dependent on both PKC and calcium signals.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0016235::aggresome confident no hit no match psy6426 74 P61758::Prefoldin subunit 3 ::Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0016272::prefoldin complex confident no hit no match psy13594 574 P27697::Probable serine/threonine-protein kinase COQ8, mitochondrial ::Putative protein kinase involved in the biosynthesis of coenzyme Q. Affects the molecular organization and function of COQ3, probably through kinase activity towards COQ3.::Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) portable no hit no match no hit no match GO:0016311::dephosphorylation confident hh_2pq5_A_1::50-91,94-179,181-193 very confident psy9802 92 Q5RKJ1::Macrophage erythroblast attacher ::Plays a role in erythroblast enucleation and in the development of the mature macrophages. Mediates the attachment of erythroid cell to mature macrophages, in correlation with the presence of MAEA at cell surface of mature macrophages; This MAEA-mediated contact inhibits erythroid cells apoptosis. Participates to erythroblastic island formation, which is the functional unit of definitive erythropoiesis. Associates with F-actin to regulate actin distribution in erythroblasts and macrophages. May contribute to nuclear architecture and cells division events.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0016363::nuclear matrix confident no hit no match psy17098 204 Q8CBF3::Ephrin type-B receptor 1 ::Receptor tyrosine kinase which binds promiscuously transmembrane ephrin-B family ligands residing on adjacent cells, leading to contact-dependent bidirectional signaling into neighboring cells. The signaling pathway downstream of the receptor is referred to as forward signaling while the signaling pathway downstream of the ephrin ligand is referred to as reverse signaling. Cognate/functional ephrin ligands for this receptor include EFNB1, EFNB2 and EFNB3. During nervous system development, regulates retinal axon guidance redirecting ipsilaterally ventrotemporal retinal ganglion cells axons at the optic chiasm midline. This probably requires repulsive interaction with EFNB2. In the adult nervous system together with EFNB3, regulates chemotaxis, proliferation and polarity of the hippocampus neural progenitors. Beside its role in axon guidance plays also an important redundant role with other ephrin-B receptors in development and maturation of dendritic spines and synapse formation. May also regulate angiogenesis. More generally, may play a role in targeted cell migration and adhesion. Upon activation by EFNB1 and probably other ephrin-B ligands activates the MAPK/ERK and the JNK signaling cascades to regulate cell migration and adhesion respectively.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0016477::cell migration confident hh_3fl7_A_1::1-7,9-119,122-125,130-141,148-149,156-170,184-195 very confident psy13476 177 Q8BL06::Inactive ubiquitin carboxyl-terminal hydrolase 54 ::Has no peptidase activity.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0016579::protein deubiquitination confident hh_2y6e_A_1::41-61,63-118,122-164,167-171 confident psy13485 152 Q8BL06::Inactive ubiquitin carboxyl-terminal hydrolase 54 ::Has no peptidase activity.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0016579::protein deubiquitination confident hh_1nb8_A_1::12-28,31-72,75-97 confident psy13401 101 Q96K12::Fatty acyl-CoA reductase 2 ::Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0016620::oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor confident hh_4dqv_A_1::25-62 confident psy7934 138 O88658::Kinesin-like protein KIF1B ::Isoform 1 mediates the transport of synaptic vesicles in neuronal cells.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0016887::ATPase activity confident no hit no match psy7247 104 Q8R491::EH domain-containing protein 3 ::Plays a role in endocytic transport.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0016887::ATPase activity confident hh_2qpt_A_1::2-103 very confident psy1878 98 Q9QWR8::Alpha-N-acetylgalactosaminidase ::Removes terminal alpha-N-acetylgalactosamine residues from glycolipids and glycopeptides. Required for the breakdown of glycolipids.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0016936::galactoside binding confident hh_3hg3_A_1::10-31,33-95 very confident psy11187 115 Q96L73::Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific ::Histone methyltransferase. Preferentially methylates 'Lys-36' of histone H3 and 'Lys-20' of histone H4 (in vitro). Transcriptional intermediary factor capable of both negatively or positively influencing transcription, depending on the cellular context.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0018024::histone-lysine N-methyltransferase activity confident hh_3ooi_A_1::18-90 very confident psy9336 99 Q5PPI9::Probable tubulin polyglutamylase TTLL1 ::Catalytic subunit of the neuronal tubulin polyglutamylase complex. Modifies alpha- and beta-tubulin, generating side chains of glutamate on the gamma-carboxyl groups of specific glutamate residues within the C-terminal tail of alpha- and beta-tubulin.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0018095::protein polyglutamylation confident hh_3tig_A_1::39-75,80-99 confident psy1340 51 no hit no match no hit no match no hit no match GO:0019226::transmission of nerve impulse confident hh_2h0b_A_1::11-29,32-49 confident psy13477 295 Q9BI18::Protein yellow ::Controls the pigmentation pattern of the adult cuticle and larval mouth parts.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match no hit no match GO:0019438::aromatic compound biosynthetic process confident hh_3q6k_A_1::52-64,74-133,144-204,232-286,288-294 very confident psy7387 196 Q3ZBG5::BAG family molecular chaperone regulator 2 ::Inhibits the chaperone activity of HSP70/HSC70 by promoting substrate release.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0019538::protein metabolic process confident hh_3cqx_C_1::107-183,186-193 very confident psy6928 2851 A8MUU9::Putative uncharacterized protein ENSP00000383309 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0019898::extrinsic to membrane confident rp_3h0g_A_1::176-187,190-226,230-232,235-241,244-250,253-259,262-268,271-277,280-286,289-295,298-304,307-313,316-322,325-331,334-340,343-349,352-358,361-367,370-376,379-385,388-394,397-403,406-412,415-421,424-430,433-439,442-448,451-457 confident psy17958 678 Q8R149::BUD13 homolog ::::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0019898::extrinsic to membrane confident no hit no match psy15339 795 Q8WXI7::Mucin-16 ::Thought to provide a protective, lubricating barrier against particles and infectious agents at mucosal surfaces.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0019898::extrinsic to membrane confident no hit no match psy8303 5121 no hit no match no hit no match no hit no match GO:0019898::extrinsic to membrane confident no hit no match psy17721 130 Q9CY21::Uncharacterized methyltransferase WBSCR22 ::Methyltransferase that may act on DNA.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0022008::neurogenesis confident hh_3evz_A_1::18-37,39-60,62-69 portable psy14782 97 P09180::60S ribosomal protein L4 ::::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0022625::cytosolic large ribosomal subunit confident hh_2zkr_c_1::1-93 very confident psy1342 144 Q56K03::60S ribosomal protein L27a ::::Bos taurus (taxid: 9913) very confident no hit no match no hit no match GO:0022625::cytosolic large ribosomal subunit confident hh_4a17_K_1::34-125,127-138 very confident psy14307 1235 O55103::Periaxin ::Seems to be required for maintenance of peripheral nerve myelin sheath. May have a role in axon-glial interactions, possibly by interacting with the cytoplasmic domains of integral membrane proteins such as myelin-associated glycoprotein in the periaxonal regions of the Schwann cell plasma membrane. May have a role in the early phases of myelin deposition.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0030016::myofibril confident hh_2zuo_A_1::698-728,731-824,826-872,874-911 portable psy12308 251 no hit no match no hit no match no hit no match GO:0030018::Z disc confident no hit no match psy17760 105 no hit no match no hit no match no hit no match GO:0030018::Z disc confident hh_2bol_A_1::52-90 portable psy17759 100 no hit no match no hit no match no hit no match GO:0030018::Z disc confident hh_2bol_A_1::47-85 portable psy14437 160 O77819::Rho-associated protein kinase 1 ::Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. Involved in regulation of smooth muscle contraction, actin cytoskeleton organization, stress fiber and focal adhesion formation, neurite retraction, cell adhesion and motility via phosphorylation of DAPK3, GFAP, LIMK1, LIMK2, MYL9/MLC2, PFN1 and PPP1R12A. Phosphorylates FHOD1 and acts synergistically with it to promote SRC-dependent non-apoptotic plasma membrane blebbing. Phosphorylates JIP3 and regulates the recruitment of JNK to JIP3 upon UVB-induced stress. Acts as a suppressor of inflammatory cell migration by regulating PTEN phosphorylation and stability. Acts as a negative regulator of VEGF-induced angiogenic endothelial cell activation. Required for centrosome positioning and centrosome-dependent exit from mitosis Plays a role in terminal erythroid differentiation. May regulate closure of the eyelids and ventral body wall by inducing the assembly of actomyosin bundles. Promotes keratinocyte terminal differentiation.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match no hit no match GO:0030030::cell projection organization confident hh_2row_A_1::10-40 confident psy13388 196 Q63788::Phosphatidylinositol 3-kinase regulatory subunit beta ::Binds to activated (phosphorylated) protein-tyrosine kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0030168::platelet activation confident rp_2y3a_B_1::94-194 very confident psy135 418 Q96LT4::Sphingomyelin synthase-related protein 1 ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0030176::integral to endoplasmic reticulum membrane confident hh_2kg5_A_1::8-32,34-53,56-78 confident psy12298 68 Q24270::Voltage-dependent calcium channel type D subunit alpha-1 ::Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. Encodes a dihydropyridine- and diltiazem-sensitive current in larval body wall muscle. Vital for embryonic development.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0030315::T-tubule confident no hit no match psy14745 854 Q9ULJ6::Zinc finger MIZ domain-containing protein 1 ::Increases ligand-dependent transcriptional activity of AR and promotes AR sumoylation. The stimulation of AR activity is dependent upon sumoylation.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0030374::ligand-dependent nuclear receptor transcription coactivator activity confident hh_4fo9_A_1::5-158,165-245,248-269 very confident psy6472 72 no hit no match no hit no match no hit no match GO:0030426::growth cone confident hh_2odv_A_1::1-30,34-71 very confident psy6561 223 no hit no match no hit no match no hit no match GO:0030426::growth cone confident no hit no match psy15401 107 Q27889::Serine/threonine-protein phosphatase 2B catalytic subunit 2 ::Calcium-dependent, calmodulin-stimulated protein phosphatase. This subunit may have a role in the calmodulin activation of calcineurin.::Drosophila melanogaster (taxid: 7227) very confident no hit no match no hit no match GO:0030431::sleep very confident hh_1aui_A_1::8-85 very confident psy14743 86 P00516::cGMP-dependent protein kinase 1 ::Serine/threonine protein kinasethat acts as key mediator of the nitric oxide (NO)/cGMP signaling pathway. GMP binding activates PRKG1, which phosphorylates serines and threonines on many cellular proteins. Numerous protein targets for PRKG1 phosphorylation are implicated in modulating cellular calcium, but the contribution of each of these targets may vary substantially among cell types. Proteins that are phosphorylated by PRKG1 regulate platelet activation and adhesion, smooth muscle contraction, cardiac function, gene expression, feedback of the NO-signaling pathway, and other processes involved in several aspects of the CNS like axon guidance, hippocampal and cerebellar learning, circadian rhythm and nociception. Smoth muscle relaxation is mediated through lowering of intracellular free calcium, by desensitization of contractile proteins to calcium, and by decrease in the contractile state of smooth muscle or in platelet activation. Regulates intracellular calcium levels via several pathways: phosphorylates MRVI1/IRAG and inhibits IP3-induced Ca(2+) release from intracellular stores, phosphorylation of KCNMA1 (BKCa) channels decreases intracellular Ca(2+) levels, which leads to increased opening of this channel. PRKG1 phosphorylates the canonical transient receptor potential channel (TRPC) family which inactivates the associated inward calcium current. Another mode of action of NO/cGMP/PKGI signaling involves PKGI-mediated inactivation of the Ras homolog gene family member A (RhoA). Phosphorylation of RHOA by PRKG1 blocks the action of this protein in myriad processes: regulation of RHOA translocation; decreasing contraction; controlling vesicle trafficking, reduction of myosin light chain phosphorylation resulting in vasorelaxation. Activation of PRKG1 by NO signaling alters also gene expression in a number of tissues. In smooth muscle cells, increased cGMP and PRKG1 activity influence expression of smooth muscle-specific contractile proteins, levels of proteins in the NO/cGMP signaling pathway, down-regulation of the matrix proteins osteopontin and thrombospondin-1 to limit smooth muscle cell migration and phenotype. Regulates vasodilator-stimulated phosphoprotein (VASP) functions in platelets and smooth muscle.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0030553::cGMP binding confident hh_3ocp_A_1::3-74 very confident psy8352 69 no hit no match no hit no match no hit no match GO:0030837::negative regulation of actin filament polymerization confident hh_3dad_A_1::1-68 very confident psy6200 112 Q6AYH2::INO80 complex subunit E ::Putative regulatory component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0031011::Ino80 complex confident no hit no match psy8839 74 Q9VX09::Actin-related protein 8 ::Proposed core component of the chromatin remodeling INO80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0031011::Ino80 complex confident bp_4fo0_A_1::18-71 confident psy1698 258 Q10172::Actin cytoskeleton-regulatory complex protein pan1 ::Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match no hit no match GO:0031012::extracellular matrix confident no hit no match psy13577 75 P11021::78 kDa glucose-regulated protein ::Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0031090::organelle membrane confident hh_2v7y_A_1::9-23,28-54,57-74 very confident psy13573 166 Q14940::Sodium/hydrogen exchanger 5 ::Involved in pH regulation to eliminate acids generated by active metabolism or to counter adverse environmental conditions. Major proton extruding system driven by the inward sodium ion chemical gradient. Plays an important role in signal transduction.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0031090::organelle membrane confident hh_2l0e_A_1::27-57 confident psy14702 480 Q63802::Wee1-like protein kinase ::Acts as a negative regulator of entry into mitosis (G2 to M transition) by protecting the nucleus from cytoplasmically activated cyclin B1-complexed CDK1 before the onset of mitosis by mediating phosphorylation of CDK1 on 'Tyr-15'. Specifically phosphorylates and inactivates cyclin B1-complexed CDK1 reaching a maximum during G2 phase and a minimum as cells enter M phase. Phosphorylation of cyclin B1-CDK1 occurs exclusively on 'Tyr-15' and phosphorylation of monomeric CDK1 does not occur. Its activity increases during S and G2 phases and decreases at M phase when it is hyperphosphorylated. A correlated decrease in protein level occurs at M/G1 phase, probably due to its degradation.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0031323::regulation of cellular metabolic process confident hh_1x8b_A_1::113-380 very confident psy13561 99 Q9W0Y8::Sodium channel protein 60E ::Mediates the voltage-dependent sodium ion permeability of excitable membranes. Plays a role in processing of olfactory information during the olfactory avoidance response.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0031402::sodium ion binding confident hh_4dxw_A_1::5-88,90-94 very confident psy14726 712 Q6JEL2::Kelch-like protein 10 ::::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0031463::Cul3-RING ubiquitin ligase complex confident hh_4asc_A_1::348-355,363-377,379-615,618-637 very confident psy17732 186 P35554::Flightin ::Possibly involved in the regulation of flight muscles contraction, possibly by modulating actin-myosin interaction.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0031672::A band confident rp_1vt4_I_1::5-8,12-28,41-93,103-179 portable psy3990 3139 Q09165::Mesocentin ::Encodes an adhesion molecule involved in sensory map formation. Functions during sensory process development in the nervous system.::Caenorhabditis elegans (taxid: 6239) portable no hit no match no hit no match GO:0031672::A band confident hh_3dsm_A_2::3046-3049,3052-3060 portable psy9043 566 Q0P6D6::Coiled-coil domain-containing protein 15 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0031672::A band confident no hit no match psy17963 943 Q96M34::Uncharacterized protein C3orf30 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0031672::A band confident no hit no match psy4378 136 Q9D9B0::Coiled-coil domain-containing protein 70 ::::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0031672::A band confident no hit no match psy2697 165 no hit no match no hit no match no hit no match GO:0031672::A band confident no hit no match psy6677 320 no hit no match no hit no match no hit no match GO:0031672::A band confident rp_1twf_A_2::19-56,58-168,171-180,187-196,203-252,255-281 portable psy2701 75 no hit no match no hit no match no hit no match GO:0031672::A band confident no hit no match psy8310 598 no hit no match no hit no match no hit no match GO:0031672::A band confident no hit no match psy2700 88 no hit no match no hit no match no hit no match GO:0031672::A band confident no hit no match psy2702 87 no hit no match no hit no match no hit no match GO:0031672::A band confident no hit no match psy2705 203 no hit no match no hit no match no hit no match GO:0031672::A band confident no hit no match psy7405 87 no hit no match no hit no match no hit no match GO:0031672::A band confident no hit no match psy7408 66 no hit no match no hit no match no hit no match GO:0031672::A band confident hh_1r4g_A_1::7-21,24-32 portable psy16309 271 Q8TDD5::Mucolipin-3 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0031902::late endosome membrane confident no hit no match psy14194 87 Q96AC1::Fermitin family homolog 2 ::Participates in the connection between ECM adhesion sites and the actin cytoskeleton and also in the orchestration of actin assembly and cell shape modulation. Recruits migfilin (FBLP1) protein to cell-ECM focal adhesion sites.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0031941::filamentous actin confident hh_2kmc_A_1::2-49 very confident psy12164 57 Q62848::ADP-ribosylation factor GTPase-activating protein 1 ::GTPase-activating protein (GAP) for the ADP ribosylation factor 1 (ARF1). Involved in membrane trafficking and /or vesicle transport. Promotes hydrolysis of the ARF1-bound GTP and thus, is required for the dissociation of coat proteins from Golgi-derived membranes and vesicles, a prerequisite for vesicle's fusion with target compartment. Probably regulates ARF1-mediated transport via its interaction with the KDELR proteins and TMED2. Overexpression induces the redistribution of the entire Golgi complex to the endoplasmic reticulum, as when ARF1 is deactivated. Its activity is stimulated by phosphoinosides and inhibited by phosphatidylcholine.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0031965::nuclear membrane confident hh_3dwd_A_1::1-32 very confident psy16549 60 Q9GQQ0::Protein spinster ::Probable sphingolipid transporter that plays a central role in endosomes and/or lysosomes storage. Involved in TGF-beta-mediated synaptic growth regulation both pre- and postsynaptically via its function in endosomal storage regulation. Also required during oogenesis by regulating yolk spheres storage.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0031982::vesicle confident no hit no match psy13416 67 P02572::Actin-42A ::Multiple isoforms are involved in various cellular functions such as cytoskeleton structure, cell mobility, chromosome movement and muscle contraction.::Drosophila melanogaster (taxid: 7227) very confident no hit no match no hit no match GO:0032010::phagolysosome very confident hh_2fxu_A_1::3-64 very confident psy15933 59 Q9BYB0::SH3 and multiple ankyrin repeat domains protein 3 ::Seems to be an adapter protein in the postsynaptic density (PSD) of excitatory synapses that interconnects receptors of the postsynaptic membrane including NMDA-type and metabotropic glutamate receptors via complexes with GKAP/PSD-95 and Homer, respectively, and the actin-based cytoskeleton. May play a role in the structural and functional organization of the dendritic spine and synaptic junction.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0032232::negative regulation of actin filament bundle assembly confident hh_3ivf_A_1::18-51 confident psy10215 113 Q2NL51::Glycogen synthase kinase-3 alpha ::Constitutively active protein kinase that acts as a negative regulator in the hormonal control of glucose homeostasis, Wnt signaling and regulation of transctiption factors and microtubules, by phosphorylating and inactivating glycogen synthase (GYS1 or GYS2), CTNNB1/beta-catenin, APC and AXIN1. Requires primed phosphorylation of the majority of its substrates. Contributes to insulin regulation of glycogen synthesis by phosphorylating and inhibiting GYS1 activity and hence glycogen synthesis. Regulates glycogen metabolism in liver, but not in muscle. May also mediate the development of insulin resistance by regulating activation of transcription factors. In Wnt signaling, regulates the level and transcriptional activity of nuclear CTNNB1/beta-catenin. May be involved in the regulation of replication in pancreatic beta-cells. Is necessary for the establishment of neuronal polarity and axon outgrowth.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0032502::developmental process confident hh_4e7w_A_1::2-74 very confident psy13593 264 O97790::TBC1 domain family member 1 ::May act as a GTPase-activating protein for Rab family protein(s). May play a role in the cell cycle and differentiation of various tissues. Involved in the trafficking and translocation of GLUT4-containing vesicles and insulin-stimulated glucose uptake into cells.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0032851::positive regulation of Rab GTPase activity confident hh_3qye_A_1::2-36,38-264 very confident psy14585 66 O00327::Aryl hydrocarbon receptor nuclear translocator-like protein 1 ::ARNTL-CLOCK heterodimers activate E-box element (3'-CACGTG-5') transcription of a number of proteins of the circadian clock. This transcription is inhibited in a feedback loop by PER, and also by CRY proteins.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0032922::circadian regulation of gene expression confident no hit no match psy9692 142 Q61466::SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 ::Involved in chromatin remodeling. Has a strong influence on the Vitamin D-mediated transcriptional activity from an enhancer Vitamin D receptor element (VDRE). May be a link between mammalian SWI-SNF-like chromatin remodeling complexes and the vitamin D receptor (VDR) heterodimer. Mediates critical interactions between nuclear receptors and the BRG1/SMARCA4 chromatin-remodeling complex for transactivation. Also involved in vitamin D-coupled transcription regulation via its association with the WINAC complex, a chromatin-remodeling complex recruited by vitamin D receptor (VDR), which is required for the ligand-bound VDR-mediated transrepression of the CYP27B1 gene (By similarity). Belongs to the neural progenitors-specific chromatin remodeling complex (npBAF complex) and the neuron-specific chromatin remodeling complex (nBAF complex). During neural development a switch from a stem/progenitor to a post-mitotic chromatin remodeling mechanism occurs as neurons exit the cell cycle and become committed to their adult state. The transition from proliferating neural stem/progenitor cells to post-mitotic neurons requires a switch in subunit composition of the npBAF and nBAF complexes. As neural progenitors exit mitosis and differentiate into neurons, npBAF complexes which contain ACTL6A/BAF53A and PHF10/BAF45A, are exchanged for homologous alternative ACTL6B/BAF53B and DPF1/BAF45B or DPF3/BAF45C subunits in neuron-specific complexes (nBAF). The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells. The nBAF complex along with CREST plays a role regulating the activity of genes essential for dendrite growth.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0032947::protein complex scaffold confident no hit no match psy13490 138 Q24325::Transcription initiation factor TFIID subunit 2 ::TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. An essential subunit binds to core promoter DNA.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0033276::transcription factor TFTC complex confident hh_2gtq_A_1::6-29,33-137 confident psy4196 168 Q9Y113::Negative elongation factor B ::Essential component of the NELF complex, a complex that negatively regulates the elongation of transcription by RNA polymerase II.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0034244::negative regulation of transcription elongation from RNA polymerase II promoter confident rp_1vt4_I_1::12-27,29-135,141-166 portable psy16583 677 Q8VD72::Tetratricopeptide repeat protein 8 ::The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function. This ciliogenic function is mediated in part by the Rab8 GDP/GTP exchange factor, which localizes to the basal body and contacts the BBSome. Rab8(GTP) enters the primary cilium and promotes extension of the ciliary membrane. Firstly the BBSome associates with the ciliary membrane and binds to RAB3IP/Rabin8, the guanosyl exchange factor (GEF) for Rab8 and then the Rab8-GTP localizes to the cilium and promotes docking and fusion of carrier vesicles to the base of the ciliary membrane.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0035264::multicellular organism growth confident hh_1na0_A_1::533-565,568-584,604-674 very confident psy11336 194 Q99502::Eyes absent homolog 1 ::Tyrosine phosphatase that specifically dephosphorylates 'Tyr-142' of histone H2AX (H2AXY142ph). 'Tyr-142' phosphorylation of histone H2AX plays a central role in DNA repair and acts as a mark that distinguishes between apoptotic and repair responses to genotoxic stress. Promotes efficient DNA repair by dephosphorylating H2AX, promoting the recruitment of DNA repair complexes containing MDC1. Its function as histone phosphatase probably explains its role in transcription regulation during organogenesis. Seems to coactivate SIX2, SIX4 and SIX5. May be required for normal development of branchial arches, ear and kidney.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0035335::peptidyl-tyrosine dephosphorylation confident hh_3geb_A_1::53-148,154-192 very confident psy7743 133 Q6P6C2::RNA demethylase ALKBH5 ::Probable dioxygenase that requires molecular oxygen, alpha-ketoglutarate and iron.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0035515::oxidative RNA demethylase activity confident no hit no match psy17380 107 P55011::Solute carrier family 12 member 2 ::Electrically silent transporter system. Mediates sodium and chloride reabsorption. Plays a vital role in the regulation of ionic balance and cell volume.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0035826::rubidium ion transport confident hh_3g40_A_1::2-26,29-29,31-67,69-70 portable psy11223 192 A8DYE2::Transient receptor potential cation channel trpm ::Calcium channel mediating constitutive calcium ion entry.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0035841::new growing cell tip confident hh_1weh_A_1::32-43,45-54,56-73,75-89,96-102 portable psy16990 250 A8DYE2::Transient receptor potential cation channel trpm ::Calcium channel mediating constitutive calcium ion entry.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0035841::new growing cell tip confident hh_1weh_A_1::29-40,42-51,53-70,72-85,90-90,93-99 portable psy7246 178 Q7L2J0::7SK snRNA methylphosphate capping enzyme ::S-adenosyl-L-methionine-dependent methyltransferase that adds a methylphosphate cap at the 5'-end of 7SK snRNA, leading to stabilize it.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0040031::snRNA modification confident no hit no match psy13331 143 no hit no match no hit no match no hit no match GO:0042060::wound healing confident no hit no match psy13330 289 no hit no match no hit no match no hit no match GO:0042060::wound healing confident no hit no match psy2810 80 O15438::Canalicular multispecific organic anion transporter 2 ::May act as an inducible transporter in the biliary and intestinal excretion of organic anions. Acts as an alternative route for the export of bile acids and glucuronides from cholestatic hepatocytes.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0042221::response to chemical stimulus confident no hit no match psy6198 111 Q22366::Rab-3-interacting molecule unc-10 ::Regulates the efficiency of a post-docking step of the release pathway. Acts after vesicle docking likely via regulating priming. May regulate the conformational changes in syntaxin. Binding of vesicles via rab-3[GTP] to Rim may signal the presence of a docked synaptic vesicle. Rim may then signal to unc-13 to change the conformation of syntaxin from the closed to the open state. Syntaxin could then engage synaptobrevin on the docked vesicle to form SNARE complexes and to prime the vesicle for release. Not required for the development or the structural organization of synapses.::Caenorhabditis elegans (taxid: 6239) portable no hit no match no hit no match GO:0042391::regulation of membrane potential confident hh_2q3x_A_1::60-105 very confident psy15905 60 Q9VSS2::Signal recognition particle 68 kDa protein ::Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane. Srp68 binds the 7S RNA, Srp72 binds to this complex subsequently. This ribonucleoprotein complex might interact directly with the docking protein in the ER membrane and possibly participate in the elongation arrest function.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0042493::response to drug confident no hit no match psy7189 120 B5DFN3::Mitochondrial nucleoid factor 1 ::::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0042645::mitochondrial nucleoid confident rp_1vt4_I_1::10-110,114-119 portable psy6104 118 Q03720::Calcium-activated potassium channel slowpoke ::Potassium channel activated by both membrane depolarization or increase in cytosolic Ca(2+) that mediates export of K(+). Its activation dampens the excitatory events that elevate the cytosolic Ca(2+) concentration and/or depolarize the cell membrane. It therefore contributes to repolarization of the membrane potential. Kinetics are determined by alternative splicing, phosphorylation status and its combination interaction with Slob and 14-3-3-zeta. While the interaction with Slob1 alone increases its activity, its interaction with both Slob1 and 14-3-3-zeta decreases its activity.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0043025::neuronal cell body confident hh_2knc_B_1::31-64 portable psy4041 162 Q6P2Z0::Basic leucine zipper and W2 domain-containing protein 1 ::Enhances histone H4 gene transcription but does not seem to bind DNA directly.::Xenopus tropicalis (taxid: 8364) confident no hit no match no hit no match GO:0043025::neuronal cell body confident no hit no match psy10492 78 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) very confident no hit no match no hit no match GO:0043025::neuronal cell body very confident no hit no match psy10493 226 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0043025::neuronal cell body confident no hit no match psy10489 147 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0043025::neuronal cell body confident no hit no match psy10258 69 Q9W4E2::Neurobeachin ::Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0043025::neuronal cell body confident hh_1f1f_A_1::26-69 portable psy3720 190 no hit no match no hit no match no hit no match GO:0043025::neuronal cell body confident no hit no match psy7794 139 no hit no match no hit no match no hit no match GO:0043073::germ cell nucleus confident no hit no match psy9383 133 P85830::Diuretic hormone class 2 ::Regulation of fluid secretion. Stimulates primary urine secretion by Malpighian tubules and causes a dose-dependent stimulation of cAMP levels in the tubules. Has a nonselective effect on Na(+)/K(+) ion transport. In vitro, primarily elevates intracellular Ca(2+).::Apis mellifera (taxid: 7460) very confident no hit no match no hit no match GO:0043204::perikaryon very confident no hit no match psy15533 387 Q28677::Solute carrier family 12 member 4 ::Mediates electroneutral potassium-chloride cotransport when activated by cell swelling. May contribute to cell volume homeostasis in single cells. May be involved in the regulation of basolateral Cl(-) exit in NaCl absorbing epithelia.::Oryctolagus cuniculus (taxid: 9986) confident no hit no match no hit no match GO:0043204::perikaryon confident hh_3g40_A_2::111-121,126-144,146-170,177-177,179-179,185-195,228-230,256-268,272-273,276-300,308-312,317-342,345-345,347-385 confident psy16456 112 Q12889::Oviduct-specific glycoprotein ::Binds to oocyte zona pellucida in vivo. May play a role in the fertilization process and/or early embryonic development.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0043226::organelle confident no hit no match psy13461 194 A7MB16::Eukaryotic translation initiation factor 3 subunit B ::Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S preinitiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of posttermination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0043229::intracellular organelle confident hh_4ggc_A_1::2-6,8-13,17-56,63-106 confident psy13418 159 B3PK40::50S ribosomal protein L2 ::One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome.::Cellvibrio japonicus (strain Ueda107) (taxid: 498211) portable no hit no match no hit no match GO:0043229::intracellular organelle confident hh_2ftc_B_1::36-43,47-159 very confident psy7033 107 P48994::Transient-receptor-potential-like protein ::A light-sensitive calcium channel that is required for inositide-mediated Ca(2+) entry in the retina during phospholipase C (PLC)-mediated phototransduction. Required for vision in the dark and in dim light. Binds calmodulin. Trp and trpl act together in the light response, although it is unclear whether as heteromultimers or distinct units. Also forms a functional cation channel with trp-gamma. Activated by fatty acids, metabolic stress, inositols and GTP-binding proteins.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0043229::intracellular organelle confident no hit no match psy12338 106 Q10172::Actin cytoskeleton-regulatory complex protein pan1 ::Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.::Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) portable no hit no match no hit no match GO:0043229::intracellular organelle confident rp_1twf_A_3::3-104 portable psy16208 116 Q13003::Glutamate receptor ionotropic, kainate 3 ::Receptor for glutamate that functions as ligand-gated ion channel in the central nervous system and plays an important role in excitatory synaptic transmission. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. This receptor binds domoate > kainate >> L-glutamate = quisqualate >> AMPA = NMDA.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0043229::intracellular organelle confident hh_3kg2_A_1::5-59 confident psy5556 115 Q6C908::Actin cytoskeleton-regulatory complex protein PAN1 ::Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.::Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) portable no hit no match no hit no match GO:0043229::intracellular organelle confident rp_2w7z_A_1::7-104 portable psy16577 491 Q6ZQX7::Uncharacterized protein C17orf97 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0043229::intracellular organelle confident rp_1vt4_I_1::233-239,242-257,262-289,300-313,317-348,350-351,363-372,374-394,397-406,416-420,425-426 portable psy16371 91 A6QM06::Sterol regulatory element-binding protein cleavage-activating protein ::Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.::Bos taurus (taxid: 9913) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy5761 144 B4F777::High mobility group nucleosome-binding domain-containing protein 5 ::Preferentially binds to euchromatin and modulates cellular transcription by counteracting linker histone-mediated chromatin compaction.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy2852 488 P12027::Polysialoglycoprotein ::In response to egg activation, PSGP is discharged by exocytosis into the perivitelline space, where it undergo rapid proteolysis into glycotridecapeptides. During fertilization and/or early development the glycotridecapeptides prevent polyspermy or are involved in the formation of a fertilization membrane.::Oncorhynchus mykiss (taxid: 8022) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy13604 167 P17710::Hexokinase-1 ::::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident hh_1cza_N_1::79-165 very confident psy14635 162 Q13635::Protein patched homolog 1 ::Acts as a receptor for sonic hedgehog (SHH), indian hedgehog (IHH) and desert hedgehog (DHH). Associates with the smoothened protein (SMO) to transduce the hedgehog's proteins signal. Seems to have a tumor suppressor function, as inactivation of this protein is probably a necessary, if not sufficient step for tumorigenesis.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident hh_4dx5_A_1::21-92 portable psy13545 87 Q32PD8::Leptin receptor overlapping transcript-like 1 ::Negatively regulates growth hormone (GH) receptor cell surface expression in liver. May play a role in liver resistance to GH during periods of reduced nutrient availability.::Bos taurus (taxid: 9913) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy1060 101 Q5ZKA6::WAS protein family homolog 1 ::Acts as a nucleation-promoting factor at the surface of endosomes, where it recruits and activates the Arp2/3 complex to induce actin polymerization, playing a key role in the fission of tubules that serve as transport intermediates during endosome sorting.::Gallus gallus (taxid: 9031) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident hh_2vcp_D_1::1-6,9-10,14-24,26-28,30-53 portable psy7255 289 Q8CFQ3::Intron-binding protein aquarius ::Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre-mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident rp_3rjo_A_1::147-233 portable psy17068 157 no hit no match no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident hh_2z73_A_1::57-67 portable psy8315 107 no hit no match no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy15848 158 no hit no match no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy5195 334 no hit no match no hit no match no hit no match GO:0043231::intracellular membrane-bounded organelle confident no hit no match psy9368 179 Q0P6D6::Coiled-coil domain-containing protein 15 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0043232::intracellular non-membrane-bounded organelle confident no hit no match psy16212 233 no hit no match no hit no match no hit no match GO:0043232::intracellular non-membrane-bounded organelle confident no hit no match psy6459 66 O75334::Liprin-alpha-2 ::Alters PTPRF cellular localization and induces PTPRF clustering. May regulate the disassembly of focal adhesions. May localize receptor-like tyrosine phosphatases type 2A at specific sites on the plasma membrane, possibly regulating their interaction with the extracellular environment and their association with substrates.::Homo sapiens (taxid: 9606) very confident no hit no match no hit no match GO:0043234::protein complex very confident no hit no match psy13778 295 P27951::IgA FC receptor ::::Streptococcus agalactiae (taxid: 1311) portable no hit no match no hit no match GO:0043234::protein complex confident hh_1wck_A_1::231-251 confident psy5973 127 Q04690::Neurofibromin ::Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0043234::protein complex confident rp_1vt4_I_1::59-85,94-110 portable psy17710 75 Q04690::Neurofibromin ::Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0043234::protein complex confident no hit no match psy14863 319 Q04690::Neurofibromin ::Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0043234::protein complex confident rp_1vt4_I_1::7-13,21-42,45-107,110-123,126-171,177-184,186-194,197-230,238-243,246-249,261-303,305-319 portable psy14867 224 Q04690::Neurofibromin ::Stimulates the GTPase activity of Ras. NF1 shows greater affinity for Ras GAP, but lower specific activity. May be a regulator of Ras activity.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0043234::protein complex confident no hit no match psy13609 182 Q3TRM8::Hexokinase-3 ::::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0043234::protein complex confident hh_3f9m_A_1::1-53,55-58,60-124,128-133,135-142,145-162 very confident psy13556 127 Q3U492::Kielin/chordin-like protein ::Enhances bone morphogenetic protein (BMP) signaling in a paracrine manner. In contrast, it inhibits both the activin-A and TGFB1-mediated signaling pathways.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0043234::protein complex confident hh_1u5m_A_1::61-77,80-121 confident psy3640 616 Q5BK30::Outer row dynein assembly protein 16 homolog ::May play a role in axonemal outer row dynein assembly.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0043234::protein complex confident no hit no match psy13368 182 Q7TT47::Paraplegin ::Putative ATP-dependent protease.::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0043234::protein complex confident hh_2ce7_A_1::35-180 very confident psy5575 668 Q8IXT5::RNA-binding protein 12B ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0043234::protein complex confident hh_2hbt_A_1::2-31,35-71,77-98 confident psy6473 61 no hit no match no hit no match no hit no match GO:0043234::protein complex confident hh_2do9_A_1::24-40,42-58 portable psy14454 117 no hit no match no hit no match no hit no match GO:0043234::protein complex confident hh_2no2_A_1::10-81 confident psy15631 213 P40667::SRY-related protein CH3 (Fragment) ::::Gallus gallus (taxid: 9031) confident no hit no match no hit no match GO:0043281::regulation of cysteine-type endopeptidase activity involved in apoptotic process confident hh_1gt0_D_1::2-34 confident psy4082 86 P53405::Insulin gene enhancer protein isl-1 ::Binds to one of the cis-acting domain of the insulin gene enhancer. May be involved in subtype specialization of primary motoneurons.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0043433::negative regulation of sequence-specific DNA binding transcription factor activity confident hh_2rgt_A_1::48-79 confident psy3878 299 Q0VA40::Transcription factor Sp9 ::Transcription factor which plays a key role in limb development. Positively regulates FGF8 expression in the apical ectodermal ridge (AER) and contributes to limb outgrowth in embryos.::Xenopus tropicalis (taxid: 8364) portable no hit no match no hit no match GO:0043565::sequence-specific DNA binding confident no hit no match psy13489 172 Q24325::Transcription initiation factor TFIID subunit 2 ::TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. An essential subunit binds to core promoter DNA.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0043565::sequence-specific DNA binding confident hh_2gtq_A_1::80-153 portable psy12192 82 Q8BXR5::Sodium leak channel non-selective protein ::Voltage-independent, cation-nonselective channel which is permeable to sodium, potassium and calcium ions. Responsible for the background sodium ion leak current in neurons and controls neuronal excitability. Activated either by neuropeptides substance P or neurotensin. Required for normal respiratory rhythm and neonatal survival.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0043679::axon terminus confident no hit no match psy13507 238 Q2TZK2::Putative metallocarboxypeptidase ecm14 ::Probable carboxypeptidase that may be involved in cell wall organization and biogenesis.::Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) portable no hit no match no hit no match GO:0044421::extracellular region part confident hh_2c1c_A_2::133-236 very confident psy8432 788 B9G9L9::BURP domain-containing protein 17 ::::Oryza sativa subsp. japonica (taxid: 39947) portable no hit no match no hit no match GO:0044424::intracellular part confident hh_3h0g_A_2::223-241,243-421 confident psy13585 142 Q8BIW1::Protein prune homolog ::Phosphodiesterase (PDE) that has higher activity toward cAMP than cGMP, as substrate. Plays a role in cell proliferation, is able to induce cell motility and acts as a negative regulator of NME1.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0044424::intracellular part confident hh_2eb0_A_1::28-51,53-53,59-63,69-93,96-96,102-102,106-138 very confident psy14765 269 Q9HCJ2::Leucine-rich repeat-containing protein 4C ::May promote neurite outgrowth of developing thalamic neurons.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0044425::membrane part confident hh_2r9u_A_1::20-30,35-75,78-141 very confident psy12975 205 Q9Y493::Zonadhesin ::Binds in a species-specific manner to the zona pellucida of the egg. May be involved in gamete recognition and/or signaling.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0044425::membrane part confident rp_1vt4_I_1::77-109,114-132,134-146,149-169 portable psy13343 396 P48432::Transcription factor SOX-2 ::Transcription factor that forms a trimeric complex with OCT4 on DNA and controls the expression of a number of genes involved in embryonic development such as YES1, FGF4, UTF1 and ZFP206. Critical for early embryogenesis and for embryonic stem cell pluripotency. May function as a switch in neuronal development. Downstream SRRT target that mediates the promotion of neural stem cell self-renewal. Keeps neural cells undifferentiated by counteracting the activity of proneural proteins and suppresses neuronal differentiation.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0044428::nuclear part confident hh_4euw_A_1::74-159 very confident psy13770 168 no hit no match no hit no match no hit no match GO:0044428::nuclear part confident no hit no match psy13552 173 Q8BR76::Meckelin ::Part of the tectonic-like complex which is required for tissue-specific ciliogenesis and may regulate ciliary membrane composition. Involved in centrosome migration to the apical cell surface during early ciliogenesis. Required for ciliary structure and function, including a role in regulating length and appropriate number through modulating centrosome duplication. Required for cell branching morphology. Essential for endoplasmic reticulum-associated degradation (ERAD) of surfactant protein C (sftpc).::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0044441::cilium part confident no hit no match psy14653 191 O70302::Cell death activator CIDE-A ::Activates apoptosis.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0044444::cytoplasmic part confident hh_1ibx_B_1::2-84 very confident psy2154 128 Q29EP6::JNK-interacting protein 3 ::The JNK-interacting protein (JIP) group of scaffold proteins selectively mediates JNK-signaling by aggregating specific components of the MAPK cascade to form a functional JNK signaling module. May function as a regulator of vesicle transport, through interations with the JNK-signaling components and motor proteins. Syd is required for efficient kinesin-I mediated axonal transport.::Drosophila pseudoobscura pseudoobscura (taxid: 46245) confident no hit no match no hit no match GO:0044444::cytoplasmic part confident no hit no match psy4121 634 no hit no match no hit no match no hit no match GO:0044444::cytoplasmic part confident no hit no match psy1444 71 P13822::S-antigen protein (Fragment) ::S antigens are soluble heat-stable proteins present in the sera of some infected individuals.::Plasmodium falciparum (isolate Palo Alto / Uganda) (taxid: 57270) portable no hit no match no hit no match GO:0044446::intracellular organelle part confident no hit no match psy12411 161 Q84UQ1::DEAD-box ATP-dependent RNA helicase 42 ::::Oryza sativa subsp. japonica (taxid: 39947) portable no hit no match no hit no match GO:0044446::intracellular organelle part confident no hit no match psy17459 208 Q9Y6D6::Brefeldin A-inhibited guanine nucleotide-exchange protein 1 ::Promotes guanine-nucleotide exchange on ARF1 and ARF3. Promotes the activation of ARF1/ARF3 through replacement of GDP with GTP.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0044446::intracellular organelle part confident no hit no match psy17970 174 A8MUX0::Keratin-associated protein 16-1 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0044464::cell part confident no hit no match psy9103 451 P15941::Mucin-1 ::The beta subunit contains a C-terminal domain which is involved in cell signaling, through phosphorylations and protein-protein interactions. Modulates signaling in ERK, SRC and NF-kappa-B pathways. In activated T-cells, influences directly or indirectly the Ras/MAPK pathway. Promotes tumor progression. Regulates TP53-mediated transcription and determines cell fate in the genotoxic stress response. Binds, together with KLF4, the PE21 promoter element of TP53 and represses TP53 activity.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0044464::cell part confident no hit no match psy14100 137 P78536::Disintegrin and metalloproteinase domain-containing protein 17 ::Cleaves the membrane-bound precursor of TNF-alpha to its mature soluble form. Responsible for the proteolytical release of soluble JAM3 from endothelial cells surface. Responsible for the proteolytic release of several other cell-surface proteins, including p75 TNF-receptor, interleukin 1 receptor type II, p55 TNF-receptor, transforming growth factor-alpha, L-selectin, growth hormone receptor, MUC1 and the amyloid precursor protein. Also involved in the activation of Notch pathway.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0044464::cell part confident hh_2knc_B_1::57-91 portable psy10836 168 Q00725::Salivary glue protein Sgs-4 ::::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0044464::cell part confident no hit no match psy15877 517 Q93008::Probable ubiquitin carboxyl-terminal hydrolase FAF-X ::Deubiquitinase involved both in the processing of ubiquitin precursors and of ubiquitinated proteins. May therefore play an important role regulatory role at the level of protein turnover by preventing degradation of proteins through the removal of conjugated ubiquitin. Essential component of TGF-beta/BMP signaling cascade. Regulates chromosome alignment and segregation in mitosis by regulating the localization of BIRC5/survivin to mitotic centromeres. Specifically hydrolyzes both 'Lys-29'- and 'Lys-33'-linked polyubiquitins chains. Specifically deubiquitinates monoubiquitinated SMAD4, opposing the activity of E3 ubiquitin-protein ligase TRIM33.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0044464::cell part confident hh_4hxt_A_1::221-253,257-263,265-266,268-289 portable psy10920 271 no hit no match no hit no match no hit no match GO:0044464::cell part confident no hit no match psy17551 73 Q9VCA2::Organic cation transporter protein ::Probably transports organic cations.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0044699::single-organism process confident no hit no match psy6223 107 no hit no match no hit no match no hit no match GO:0044699::single-organism process confident no hit no match psy3683 221 P28223::5-hydroxytryptamine receptor 2A ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0044710::single-organism metabolic process confident hh_3uon_A_1::58-94,98-143 very confident psy13345 276 O17403::Probable cleavage and polyadenylation specificity factor subunit 2 ::CPSF plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A)polymerase and other factors to bring about cleavage and poly(A) addition.::Caenorhabditis elegans (taxid: 6239) portable no hit no match no hit no match GO:0044763::single-organism cellular process confident hh_2i7t_A_1::4-13,16-46,49-68,70-122,125-190,192-206 very confident psy13470 355 P51523::Zinc finger protein 84 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0044763::single-organism cellular process confident hh_2i13_A_1::92-242,247-279 very confident psy2448 151 Q9JLI7::Sperm-associated antigen 6 ::Important for structural integrity of the central apparatus in the sperm tail and for flagellar motility.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0044763::single-organism cellular process confident hh_4hxt_A_1::3-81 confident psy13445 115 Q9R1Y5::Hypermethylated in cancer 1 protein ::Transcriptional repressor. Recognizes and binds to the consensus sequence '5-[CG]NG[CG]GGGCA[CA]CC-3'. May act as a tumor suppressor. May be involved in development of head, face, limbs and ventral body wall. Involved in down-regulation of SIRT1 and thereby is involved in regulation of p53/TP53-dependent apoptotic DNA-damage responses. The specific target gene promoter association seems to be depend on corepressors, such as CTBP1 or CTBP2 and MTA1. The regulation of SIRT1 transcription in response to nutrient deprivation seems to involve CTBP1. In cooperation with MTA1 (indicative for an association with the NuRD complex) represses transcription from CCND1/cyclin-D1 and CDKN1C/p57Kip2 specifically in quiescent cells. Involved in regulation of the Wnt signaling pathway probably by association with TCF7L2 and preventing TCF7L2 and CTNNB1 association with promoters of TCF-responsive genes. Seems to repress transcription from E2F1 and ATOH1 which involves ARID1A, indicative for the participation of a distinct SWI/SNF-type chromatin-remodeling complex. Probably represses transcription from CXCR7, FGFBP1 and EFNA1.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0044763::single-organism cellular process confident hh_1a1h_A_1::21-34,36-46,51-57,60-107,109-115 very confident psy1970 479 no hit no match no hit no match no hit no match GO:0044763::single-organism cellular process confident no hit no match psy14686 306 A5A6H4::Heterogeneous nuclear ribonucleoprotein A1 ::Involved in the packaging of pre-mRNA into hnRNP particles, transport of poly(A) mRNA from the nucleus to the cytoplasm and may modulate splice site selection.::Pan troglodytes (taxid: 9598) confident no hit no match no hit no match GO:0045111::intermediate filament cytoskeleton confident hh_1l3k_A_1::37-181,189-210 very confident psy6009 866 P55824::Probable ubiquitin carboxyl-terminal hydrolase FAF ::Required for eye and embryo development, and plays a role in compound eye assembly and oogenesis respectively. In the larval eye disks, cells outside the assembling facets require this protein for short-range cell interactions that prevent the mystery cells from becoming photoreceptors. It is also required for nuclear migration and cellularization in early embryogenesis and could play a role in pole cell determination, development or function.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0045177::apical part of cell confident hh_3ul1_B_1::353-381,397-419,421-437,441-451,477-488,493-532,535-553 portable psy16169 139 Q9VFG8::Protein kibra ::Regulator of the Hippo/SWH (Sav/Wts/Hpo) signaling pathway, a signaling pathway that plays a pivotal role in organ size control and tumor suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase cascade wherein Hippo (Hpo), in complex with its regulatory protein Salvador (Sav), phosphorylates and activates Warts (Wts) in complex with its regulatory protein Mats, which in turn phosphorylates and inactivates the Yorkie (Yki) oncoprotein. Kibra acts synergistically along with Ex and Mer to regulate the Hippo signaling pathway.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0045177::apical part of cell confident hh_2f1m_A_1::22-95 portable psy11261 247 Q8IGJ0::Protein EFR3 homolog cmp44E ::An essential gene required for embryogenesis; required for cell viability.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0045202::synapse confident hh_2qk2_A_1::15-36,41-92,95-135,149-151,164-174,178-214,216-234 portable psy11264 50 Q8IGJ0::Protein EFR3 homolog cmp44E ::An essential gene required for embryogenesis; required for cell viability.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0045202::synapse confident no hit no match psy14373 65 Q9VJ79::Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 ::Plays a role in signal transduction by regulating the intracellular concentration of cyclic nucleotides cAMP and cGMP. Catalyzes the hydrolysis of both cAMP and cGMP to 5'-AMP and 5'-GMP, respectively.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0046058::cAMP metabolic process confident hh_1tbf_A_1::9-49 portable psy15893 80 no hit no match no hit no match no hit no match GO:0046582::Rap GTPase activator activity confident no hit no match psy15892 80 no hit no match no hit no match no hit no match GO:0046582::Rap GTPase activator activity confident no hit no match psy3348 147 Q16513::Serine/threonine-protein kinase N2 ::PKC-related serine/threonine-protein kinase and Rho/Rac effector protein that participates in specific signal transduction responses in the cell. Plays a role in the regulation of cell cycle progression, actin cytoskeleton assembly, cell migration, cell adhesion, tumor cell invasion and transcription activation signaling processes. Phosphorylates CTTN in hyaluronan-induced astrocytes and hence decreases CTTN ability to associates with filamentous actin. Phosphorylates HDAC5, therefore lead to impair HDAC5 import. Direct RhoA target required for the regulation of the maturation of primordial junctions into apical junction formation in bronchial epithelial cells. Required for G2/M phases of the cell cycle progression and abscission during cytokinesis in a ECT2-dependent manner. Stimulates FYN kinase activity that is required for establishment of skin cell-cell adhesion during keratinocytes differentiation. Regulates epithelial bladder cells speed and direction of movement during cell migration and tumor cell invasion. Inhibits Akt pro-survival-induced kinase activity. Mediates Rho protein-induced transcriptional activation via the c-fos serum response factor (SRF). Phosphorylates HCV NS5B leading to stimulation of HCV RNA replication.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0046777::protein autophosphorylation confident hh_1gmi_A_1::5-71 confident psy13597 962 Q7KRY6::Nucleosomal histone kinase 1 ::Serine/threonine kinase involved in somatic mitosis and female meiosis. Required for spindle organization in mitosis, and for the establishment or maintenance of meiosis-specific chromosomal configurations, including the prophase I karyosome and the metaphase I spindle. Specifically phosphorylates nucleosomal H2A on 'Thr-119'.::Drosophila melanogaster (taxid: 7227) portable no hit no match no hit no match GO:0046777::protein autophosphorylation confident hh_2j7t_A_1::496-519,525-540,554-585,588-647,651-672,681-681,713-731,733-762,764-771,775-778,791-798,807-832 very confident psy8040 272 Q9D5L7::SPRY domain-containing SOCS box protein 1 ::Probable substrate recognition component of a SCF-like ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0046843::dorsal appendage formation confident hh_2jk9_A_1::169-270 very confident psy15316 145 Q49GP5::Phosphatidylinositol 4-kinase type 2-beta ::Contributes to the overall PI4-kinase activity of the cell. The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3).::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0046854::phosphatidylinositol phosphorylation confident no hit no match psy3513 140 Q9VCY8::ADIPOR-like receptor CG5315 ::Probable receptor, which may be involved in metabolic pathways that regulate lipid metabolism such as fatty acid oxidation.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0046982::protein heterodimerization activity confident no hit no match psy16178 73 Q3MHQ7::Lysoplasmalogenase-like protein TMEM86A ::::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0047408::alkenylglycerophosphocholine hydrolase activity confident no hit no match psy11983 66 Q9VC57::Atlastin ::GTPase tethering membranes through formation of trans-homooligomer and mediating homotypic fusion of endoplasmic reticulum membranes. Functions in endoplasmic reticulum tubular network biogenesis. May also regulate microtubule polymerization and Golgi biogenesis. Required for dopaminergic neurons survival and the growth of muscles and synapses at neuromuscular junctions.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0048468::cell development confident no hit no match psy13515 526 P51523::Zinc finger protein 84 ::May be involved in transcriptional regulation.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0048523::negative regulation of cellular process confident hh_2i13_A_2::233-238,240-273,276-332,409-494 very confident psy15248 75 O54698::Equilibrative nucleoside transporter 1 ::Mediates both influx and efflux of nucleosides across the membrane (equilibrative transporter). It is sensitive (ES) to low concentrations of the inhibitor nitrobenzylmercaptopurine riboside (NBMPR) and is sodium-independent. It has a higher affinity for adenosine. Resistant to dipyridamole and dilazep inhibition (anticancer chemotherapeutics drugs).::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0048609::multicellular organismal reproductive process confident no hit no match psy14767 195 Q9HCJ2::Leucine-rich repeat-containing protein 4C ::May promote neurite outgrowth of developing thalamic neurons.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0048731::system development confident hh_2r9u_A_1::19-30,35-75,78-141 very confident psy13591 339 Q9TT89::Homeobox protein Hox-B7 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0048863::stem cell differentiation confident no hit no match psy13592 321 Q9TT89::Homeobox protein Hox-B7 ::Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0048863::stem cell differentiation confident hh_1ftt_A_1::211-274 very confident psy13184 285 Q99PL5::Ribosome-binding protein 1 ::Acts as a ribosome receptor and mediates interaction between the ribosome and the endoplasmic reticulum membrane.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0050896::response to stimulus confident rp_1m2v_B_2::134-144,148-281 portable psy12976 87 Q5U3S7::Nitric oxide synthase-interacting protein ::Negatively regulates nitric oxide production by inducing nitric oxide synthase translocation to actin cytoskeleton and inhibiting its enzymatic activity.::Danio rerio (taxid: 7955) confident no hit no match no hit no match GO:0051001::negative regulation of nitric-oxide synthase activity confident no hit no match psy17881 68 no hit no match no hit no match no hit no match GO:0051015::actin filament binding confident no hit no match psy7641 85 A7N025::NAD-dependent malic enzyme ::::Vibrio harveyi (strain ATCC BAA-1116 / BB120) (taxid: 338187) portable no hit no match no hit no match GO:0051259::protein oligomerization confident hh_1gq2_A_1::22-85 very confident psy1336 96 A8BQB4::Glycogen debranching enzyme ::Multifunctional enzyme acting as 1,4-alpha-D-glucan:1,4-alpha-D-glucan 4-alpha-D-glycosyltransferase and amylo-1,6-glucosidase in glycogen degradation.::Equus caballus (taxid: 9796) confident no hit no match no hit no match GO:0051384::response to glucocorticoid stimulus confident hh_1iv8_A_1::2-31,38-51,53-75 confident psy11611 60 P83094::Stromal interaction molecule homolog ::Plays a role in mediating Ca(2+) influx following depletion of intracellular Ca(2+) stores.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0051533::positive regulation of NFAT protein import into nucleus confident hh_2l5y_A_1::2-14,16-26,28-53 very confident psy1353 431 Q86B61::Tyramine beta-hydroxylase ::Converts tyramine into octopamine, a neurotransmitter involved in ovulation and locomotion.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:0051704::multi-organism process confident hh_1yi9_A_1::83-94,98-115,117-118,121-129,134-212,216-236,244-275,277-277,281-354 very confident psy14644 140 P30969::Gonadotropin-releasing hormone receptor ::Receptor for gonadotropin releasing hormone (GnRH) that mediates the action of GnRH to stimulate the secretion of the gonadotropic hormones luteinizing hormone (LH) and follicle-stimulating hormone (FSH). This receptor mediates its action by association with G-proteins that activate a phosphatidylinositol-calcium second messenger system.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0051716::cellular response to stimulus confident hh_2z73_A_1::13-20,22-73,94-94,96-96,100-139 very confident psy624 69 D2HXI8::Serine/threonine-protein kinase greatwall ::Serine/threonine kinase that plays a key role in M phase by acting as a regulator of mitosis entry and maintenance. Acts by promoting the inactivation of protein phosphatase 2A (PP2A) during M phase: does not directly inhibit PP2A but acts by mediating phosphorylation and subsequent activation of ARPP19 and ENSA at 'Ser-62' and 'Ser-67', respectively. ARPP19 and ENSA are phosphatase inhibitors that specifically inhibit the PPP2R2D (PR55-delta) subunit of PP2A. Inactivation of PP2A during M phase is essential to keep cyclin-B1-CDK1 activity high. Following DNA damage, it is also involved in checkpoint recovery by being inhibited.::Ailuropoda melanoleuca (taxid: 9646) confident no hit no match no hit no match GO:0051721::protein phosphatase 2A binding confident hh_1xjd_A_1::31-46,48-69 very confident psy1355 76 P61021::Ras-related protein Rab-5B ::Protein transport. Probably involved in vesicular traffic.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0055037::recycling endosome very confident rp_1r2q_A_1::26-63 very confident psy1356 69 P61021::Ras-related protein Rab-5B ::Protein transport. Probably involved in vesicular traffic.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0055037::recycling endosome very confident rp_1r2q_A_1::26-63 very confident psy14414 76 Q8BLR9::Hypoxia-inducible factor 1-alpha inhibitor ::Hydroxylates HIF-1 alpha at 'Asp-799' in the C-terminal transactivation domain (CAD). Functions as an oxygen sensor and, under normoxic conditions, the hydroxylation prevents interaction of HIF-1 with transcriptional coactivators including Cbp/p300-interacting transactivator. Involved in transcriptional repression through interaction with HIF1A, VHL and histone deacetylases. Hydroxylates specific Asn residues within ankyrin repeat domains (ARD) of NFKB1, NFKBIA, NOTCH1, ASB4, PPP1R12A and several other ARD-containing proteins. Also hydroxylates Asp and His residues within ARDs of ANK1 and TNKS2, respectively. Negatively regulates NOTCH1 activity, accelerating myogenic differentiation (By similarity). Positively regulates ASB4 activity, promoting vascular differentiation.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0055114::oxidation-reduction process confident hh_3d8c_A_1::18-75 very confident psy13537 208 Q8CIG3::Lysine-specific histone demethylase 1B ::Histone demethylase that demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Required for de novo DNA methylation of a subset of imprinted genes during oogenesis. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. Has no effect on tri-methylated 'Lys-4', mono-, di- or tri-methylated 'Lys-9', mono-, di- or tri-methylated 'Lys-27', mono-, di- or tri-methylated 'Lys-36' of histone H3, or on mono-, di- or tri-methylated 'Lys-20' of histone H4.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0055114::oxidation-reduction process confident rp_1b37_A_1::62-86,88-187,190-195 very confident psy13542 147 Q8H191::Probable polyamine oxidase 4 ::Flavoenzyme that catalyzes the oxidation of the secondary amino group of spermine. No activity detected when spermidine, putrescine or N(1)-acetylspermine are used as substrates.::Arabidopsis thaliana (taxid: 3702) portable no hit no match no hit no match GO:0055114::oxidation-reduction process confident hh_1rsg_A_1::14-28,31-37,40-42,44-57,65-140,142-146 very confident psy14465 75 Q8IWX7::Protein unc-45 homolog B ::Acts as a co-chaperone for HSP90 and is required for proper folding of the myosin motor domain. Plays a role in sarcomere formation during muscle cell development.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0061077::chaperone-mediated protein folding confident hh_3now_A_1::2-74 very confident psy13606 583 P22717::Guanylate cyclase soluble subunit beta-2 ::::Rattus norvegicus (taxid: 10116) confident no hit no match no hit no match GO:0070026::nitric oxide binding confident no hit no match psy14698 206 Q92979::Ribosomal RNA small subunit methyltransferase NEP1 ::Involved in 40S ribosomal subunit biogenesis and 18S rRNA processing. Specifically catalyzes the N1-methylation of pseudouridine at position 1248 (Psi1248) in 18S rRNA. Thus, appears to be the methyltransferase involved in the biosynthesis of the hypermodified N1-methyl-N3-(3-amino-3-carboxypropyl) pseudouridine (m1acp3-Psi) in position 1248 in 18S rRNA. Is not able to methylate uridine at this position.::Homo sapiens (taxid: 9606) very confident no hit no match no hit no match GO:0070037::rRNA (pseudouridine) methyltransferase activity very confident hh_3oii_A_1::3-143,145-205 very confident psy12551 66 P49951::Clathrin heavy chain 1 ::Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. Two different adapter protein complexes link the clathrin lattice either to the plasma membrane or to the trans-Golgi network.::Bos taurus (taxid: 9913) confident no hit no match no hit no match GO:0070062::extracellular vesicular exosome confident hh_1xi4_A_1::5-16,19-65 very confident psy4784 78 Q3TXT3::SOSS complex subunit C ::Component of the SOSS complex, a multiprotein complex that functions downstream of the MRN complex to promote DNA repair and G2/M checkpoint. The SOSS complex associates with single-stranded DNA at DNA lesions and influences diverse endpoints in the cellular DNA damage response including cell-cycle checkpoint activation, recombinational repair and maintenance of genomic stability. Required for efficient homologous recombination-dependent repair of double-strand breaks (DSBs) and ATM-dependent signaling pathways.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0070876::SOSS complex confident no hit no match psy3619 418 Q4LDE5::Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 ::May play a role in the cell attachment process.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0070887::cellular response to chemical stimulus confident hh_2vj3_A_1::92-93,95-147,150-219 very confident psy1192 108 Q7TMK9::Heterogeneous nuclear ribonucleoprotein Q ::Heterogeneous nuclear ribonucleoprotein (hnRNP) implicated in mRNA processing mechanisms. Component of the CRD-mediated complex that promotes MYC mRNA stability. Isoform 1 and isoform 2 are associated in vitro with pre-mRNA, splicing intermediates and mature mRNA protein complexes. Isoform 1 binds to apoB mRNA AU-rich sequences (By similarity). Isoform 1 is part of the APOB mRNA editosome complex and may modulate the postranscriptional C to U RNA-editing of the APOB mRNA through either by binding to A1CF (APOBEC1 complementation factor), to APOBEC1 or to RNA itself (By similarity). May be involved in translationally coupled mRNA turnover. Implicated with other RNA-binding proteins in the cytoplasmic deadenylation/translational and decay interplay of the FOS mRNA mediated by the major coding-region determinant of instability (mCRD) domain (By similarity). Interacts in vitro preferentially with poly(A) and poly(U) RNA sequences. Isoform 2 may be involved in cytoplasmic vesicle-based mRNA transport through interaction with synaptotagmins.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0070937::CRD-mediated mRNA stability complex confident no hit no match psy13533 207 Q8CCS6::Polyadenylate-binding protein 2 ::Involved in the 3'-end formation of mRNA precursors (pre-mRNA) by the addition of a poly(A) tail of 200-250 nt to the upstream cleavage product. Stimulates poly(A) polymerase (PAPOLA) conferring processivity on the poly(A) tail elongation reaction and controls also the poly(A) tail length. Increases the affinity of poly(A) polymerase for RNA. Is also present at various stages of mRNA metabolism including nucleocytoplasmic trafficking and nonsense-mediated decay (NMD) of mRNA. Cooperates with SKIP to synergistically activate E-box-mediated transcription through MYOD1 and may regulate the expression of muscle-specific genes. Binds to poly(A) and to poly(G) with high affinity. May protect the poly(A) tail from degradation.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0071013::catalytic step 2 spliceosome very confident no hit no match psy1929 95 Q9UQ35::Serine/arginine repetitive matrix protein 2 ::Involved in pre-mRNA splicing. May function at or prior to the first catalytic step of splicing at the catalytic center of the spliceosome. May do so by stabilizing the catalytic center or the position of the RNA substrate (By similarity). Binds to RNA.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0071013::catalytic step 2 spliceosome confident no hit no match psy6898 111 Q30D77::Collagen alpha-1(XXIV) chain ::Involved in osteoblast differentiation.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0071230::cellular response to amino acid stimulus confident rp_1y0f_A_7::29-76 portable psy12049 102 no hit no match no hit no match no hit no match GO:0071230::cellular response to amino acid stimulus confident no hit no match psy16558 245 Q7TQN8::Glucose-dependent insulinotropic receptor ::Receptor for the endogenous fatty-acid ethanolamide oleoylethanolamide (OEA) and lysophosphatidylcholine (LPC). Functions as a glucose-dependent insulinotropic receptor. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Seems to act through a G(s) mediated pathway.::Rattus norvegicus (taxid: 10116) portable no hit no match no hit no match GO:0071390::cellular response to ecdysone confident no hit no match psy13242 76 Q7TQK1::Integrator complex subunit 7 ::Component of the Integrator complex, a complex involved in the small nuclear RNAs (snRNA) U1 and U2 transcription and in their 3'-box-dependent processing. The Integrator complex is associated with the C-terminal domain (CTD) of RNA polymerase II largest subunit (POLR2A) and is recruited to the U1 and U2 snRNAs genes. Plays a role in DNA damage response (DDR) signaling during the S phase.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0071479::cellular response to ionizing radiation confident no hit no match psy2971 134 Q9WTW5::Solute carrier family 22 member 3 ::Mediates potential-dependent transport of a variety of organic cations. May play a significant role in the disposition of cationic neurotoxins and neurotransmitters in the brain.::Mus musculus (taxid: 10090) portable no hit no match no hit no match GO:0071705::nitrogen compound transport confident no hit no match psy2312 392 Q6ZQX7::Uncharacterized protein C17orf97 ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0071944::cell periphery confident rp_1vt4_I_1::265-307,314-391 portable psy13644 270 Q8IXT5::RNA-binding protein 12B ::::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:0071944::cell periphery confident no hit no match psy9551 250 Q90623::Protein phosphatase 1 regulatory subunit 12A ::Regulates myosin phosphatase activity.::Gallus gallus (taxid: 9031) portable no hit no match no hit no match GO:0071944::cell periphery confident hh_2kjy_A_1::35-87 very confident psy4503 447 no hit no match no hit no match no hit no match GO:0071944::cell periphery confident no hit no match psy12002 164 Q5PR66::Tetratricopeptide repeat protein 26 ::::Danio rerio (taxid: 7955) portable no hit no match no hit no match GO:0072372::primary cilium confident hh_2xpi_A_1::74-119,121-148 portable psy15602 72 Q68FH0::Plakophilin-4 ::Plays a role as a regulator of Rho activity during cytokinesis. May play a role in junctional plaques.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0072686::mitotic spindle confident hh_3l6x_A_1::2-27,46-69 very confident psy13508 621 Q9DBC3::Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 ::S-adenosyl-L-methionine-dependent methyltransferase that mediates mRNA cap1 2'-O-ribose methylation to the 5'-cap structure of mRNAs. Methylates the ribose of the first nucleotide of a m(7)GpppG-capped mRNA to produce m(7)GpppNmp (cap1). Cap1 modification is linked to higher levels of translation.::Mus musculus (taxid: 10090) confident no hit no match no hit no match GO:0080009::mRNA methylation confident hh_3evf_A_1::216-239,241-248,252-261,277-295,297-298,312-316,319-338,340-352,357-357,359-367,372-382,395-412,414-427,432-476,478-511 very confident psy6014 69 Q76KB2::Heparan-sulfate 6-O-sulfotransferase 1 ::6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.::Gallus gallus (taxid: 9031) confident no hit no match no hit no match GO:0090097::regulation of decapentaplegic signaling pathway confident no hit no match psy14895 276 Q6P3K7::Casein kinase I isoform delta-B ::Casein kinases are operationally defined by their preferential utilization of acidic proteins such as caseins as substrates. Central component of the circadian clock. May act as a negative regulator of circadian rhythmicity by phosphorylating per1 and per2, which may lead to their degradation. Participates in wnt signaling.::Danio rerio (taxid: 7955) portable no hit no match no hit no match GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident rp_3sv0_A_1::1-137,148-176,180-253 very confident psy14778 210 Q70CQ2::Ubiquitin carboxyl-terminal hydrolase 34 ::Ubiquitin hydrolase that can remove conjugated ubiquitin from AXIN1 and AXIN2, thereby acting as a regulator of Wnt signaling pathway. Acts as an activator of the Wnt signaling pathway downstream of the beta-catenin destruction complex by deubiquitinating and stabilizing AXIN1 and AXIN2, leading to promote nuclear accumulation of AXIN1 and AXIN2 and positively regulate beta-catenin (CTNBB1)-mediated transcription. Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins.::Homo sapiens (taxid: 9606) confident no hit no match no hit no match GO:0090263::positive regulation of canonical Wnt receptor signaling pathway confident hh_1vjv_A_1::1-121,134-145 very confident psy12263 65 Q9MZS9::Kynurenine 3-monooxygenase ::Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid, a neurotoxic NMDA receptor antagonist and potential endogenous inhibitor of NMDA receptor signaling in axonal targeting, synaptogenesis and apoptosis during brain development. Quinolinic acid may also affect NMDA receptor signaling in pancreatic beta cells, osteoblasts, myocardial cells, and the gastrointestinal tract.::Sus scrofa (taxid: 9823) confident no hit no match no hit no match GO:1901564::organonitrogen compound metabolic process confident rp_2xdo_A_1::2-27 portable psy10042 102 Q9VP61::Acetyl-coenzyme A synthetase ::Activates acetate so that it can be used for lipid synthesis or for energy generation.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:1901576::organic substance biosynthetic process confident hh_1ry2_A_1::20-52,55-92,94-102 very confident psy3682 218 P28223::5-hydroxytryptamine receptor 2A ::This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.::Homo sapiens (taxid: 9606) portable no hit no match no hit no match GO:1901700::response to oxygen-containing compound confident hh_2ks9_A_1::15-126 very confident psy5528 182 P49021::Protein timeless ::Required for the production of circadian rhythms. The biological cycle depends on the rhythmic formation and nuclear localization of the TIM-PER complex. Light induces the degradation of TIM, which promotes elimination of PER. Nuclear activity of the heterodimer coordinatively regulates PER and TIM transcription through a negative feedback loop. Behaves as a negative element in circadian transcriptional loop. Does not appear to bind DNA, suggesting indirect transcriptional inhibition.::Drosophila melanogaster (taxid: 7227) confident no hit no match no hit no match GO:2000678::negative regulation of transcription regulatory region DNA binding confident rp_3lvg_D_1::136-182 portable