BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10000
(193 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P41115|RS11_XENLA 40S ribosomal protein S11 OS=Xenopus laevis GN=rps11 PE=2 SV=1
Length = 158
Score = 250 bits (639), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/154 (79%), Positives = 136/154 (88%), Gaps = 5/154 (3%)
Query: 45 ETERAFQKQPTIFLARK-----PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TERA+QKQPTIF +K T K+K RY+++VGLGFKTPREAIDGTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTG 64
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G+V KMKMQRTIVIRRDYLHYI+KYNRFEKRH+NMSVHLSP FRDV++GD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGD 124
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
VTVGECRPLSKTVRFNVLKVTK G+KK F+KF
Sbjct: 125 TVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
>sp|P62282|RS11_RAT 40S ribosomal protein S11 OS=Rattus norvegicus GN=Rps11 PE=1 SV=3
Length = 158
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 136/154 (88%), Gaps = 5/154 (3%)
Query: 45 ETERAFQKQPTIFLARK-----PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TERA+QKQPTIF +K T K+K RY+K +GLGFKTP+EAI+GTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G+V KMKMQRTIVIRRDYLHYI+KYNRFEKRH+NMSVHLSP FRDV+IGD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
+VTVGECRPLSKTVRFNVLKVTK G+KK F+KF
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
>sp|P62281|RS11_MOUSE 40S ribosomal protein S11 OS=Mus musculus GN=Rps11 PE=2 SV=3
Length = 158
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 136/154 (88%), Gaps = 5/154 (3%)
Query: 45 ETERAFQKQPTIFLARK-----PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TERA+QKQPTIF +K T K+K RY+K +GLGFKTP+EAI+GTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G+V KMKMQRTIVIRRDYLHYI+KYNRFEKRH+NMSVHLSP FRDV+IGD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
+VTVGECRPLSKTVRFNVLKVTK G+KK F+KF
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
>sp|P61270|RS11_MACFA 40S ribosomal protein S11 OS=Macaca fascicularis GN=RPS11 PE=2 SV=3
Length = 158
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 136/154 (88%), Gaps = 5/154 (3%)
Query: 45 ETERAFQKQPTIFLARK-----PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TERA+QKQPTIF +K T K+K RY+K +GLGFKTP+EAI+GTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G+V KMKMQRTIVIRRDYLHYI+KYNRFEKRH+NMSVHLSP FRDV+IGD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
+VTVGECRPLSKTVRFNVLKVTK G+KK F+KF
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
>sp|P62280|RS11_HUMAN 40S ribosomal protein S11 OS=Homo sapiens GN=RPS11 PE=1 SV=3
Length = 158
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 136/154 (88%), Gaps = 5/154 (3%)
Query: 45 ETERAFQKQPTIFLARK-----PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TERA+QKQPTIF +K T K+K RY+K +GLGFKTP+EAI+GTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G+V KMKMQRTIVIRRDYLHYI+KYNRFEKRH+NMSVHLSP FRDV+IGD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
+VTVGECRPLSKTVRFNVLKVTK G+KK F+KF
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
>sp|Q3T0V4|RS11_BOVIN 40S ribosomal protein S11 OS=Bos taurus GN=RPS11 PE=2 SV=3
Length = 158
Score = 248 bits (634), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 136/154 (88%), Gaps = 5/154 (3%)
Query: 45 ETERAFQKQPTIFLARK-----PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TERA+QKQPTIF +K T K+K RY+K +GLGFKTP+EAI+GTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G+V KMKMQRTIVIRRDYLHYI+KYNRFEKRH+NMSVHLSP FRDV+IGD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
+VTVGECRPLSKTVRFNVLKVTK G+KK F+KF
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
>sp|Q9XSU4|RS11_CANFA 40S ribosomal protein S11 OS=Canis familiaris GN=RPS11 PE=1 SV=2
Length = 158
Score = 248 bits (632), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 121/154 (78%), Positives = 135/154 (87%), Gaps = 5/154 (3%)
Query: 45 ETERAFQKQPTIFLARK-----PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TERA+QKQPTIF +K T K+K RY+K +GLGFKTP+EAI+GTYIDKKCPFTG
Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G+V KMKMQRTIVIRRDYLHYI+KYNRFEKRH+NMSVHLSP FRDV IGD
Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVHIGD 124
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
+VTVGECRPLSKTVRFNVLKVTK G+KK F+KF
Sbjct: 125 IVTVGECRPLSKTVRFNVLKVTKAAGTKKQFQKF 158
>sp|P52812|RS11_ANOGA 40S ribosomal protein S11 OS=Anopheles gambiae GN=RpS11 PE=2 SV=2
Length = 153
Score = 239 bits (611), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 115/152 (75%), Positives = 130/152 (85%)
Query: 42 SPRETERAFQKQPTIFLARKPTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNV 101
+ ++ RAFQKQ I L RK +KK LR H ++GLGFKTP+EAI GTYIDKKCPFTG++
Sbjct: 2 ADQQNIRAFQKQLGINLNRKNVSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHI 61
Query: 102 SIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVV 161
SIRGRIL G+VRKMKM RTIVIRRDYLH+I+KY+RFEKRHRNMSVHLSP FRDVE GD+V
Sbjct: 62 SIRGRILTGVVRKMKMHRTIVIRRDYLHFIRKYDRFEKRHRNMSVHLSPCFRDVEAGDIV 121
Query: 162 TVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
TVGECRPLSKTVRFNVLKV+K GSKK F KF
Sbjct: 122 TVGECRPLSKTVRFNVLKVSKMAGSKKKFSKF 153
>sp|Q292D0|RS11_DROPS 40S ribosomal protein S11 OS=Drosophila pseudoobscura pseudoobscura
GN=RpS11 PE=3 SV=2
Length = 155
Score = 236 bits (602), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/152 (76%), Positives = 132/152 (86%), Gaps = 3/152 (1%)
Query: 45 ETERAFQKQPTIFLARK---PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNV 101
+ ERAFQKQ + L RK KKK LR ++ VGLGFKTPREAIDGTYIDKKCP+TG+V
Sbjct: 4 QNERAFQKQFGVNLNRKVKPGVTKKKILRRYRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63
Query: 102 SIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVV 161
IRGRILIG+VRK KMQRTIVIRRDYLH+++KY+RFEKRHRNMSVH SPAFRDVE GD+V
Sbjct: 64 RIRGRILIGVVRKTKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPAFRDVEHGDIV 123
Query: 162 TVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
T+GECRPLSKTVRFNVLKV KG G+KK+FKKF
Sbjct: 124 TIGECRPLSKTVRFNVLKVNKGQGAKKSFKKF 155
>sp|Q6XHX5|RS11_DROYA 40S ribosomal protein S11 OS=Drosophila yakuba GN=RpS11 PE=2 SV=1
Length = 155
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 130/152 (85%), Gaps = 3/152 (1%)
Query: 45 ETERAFQKQPTIFLARK---PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNV 101
+ ERAFQKQ + L RK KKK LR + VGLGFKTPREAIDGTYIDKKCP+TG+V
Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63
Query: 102 SIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVV 161
IRGRIL G+VRK KMQRTIVIRRDYLH+++KY+RFEKRHRNMSVH SP FRDVE GD+V
Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIV 123
Query: 162 TVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
T+GECRPLSKTVRFNVLKV+KG G+KK+FKK+
Sbjct: 124 TIGECRPLSKTVRFNVLKVSKGQGAKKSFKKY 155
>sp|Q0E9B6|RS11_DROME 40S ribosomal protein S11 OS=Drosophila melanogaster GN=RpS11 PE=1
SV=1
Length = 155
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/152 (75%), Positives = 130/152 (85%), Gaps = 3/152 (1%)
Query: 45 ETERAFQKQPTIFLARK---PTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNV 101
+ ERAFQKQ + L RK KKK LR + VGLGFKTPREAIDGTYIDKKCP+TG+V
Sbjct: 4 QNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWTGDV 63
Query: 102 SIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVV 161
IRGRIL G+VRK KMQRTIVIRRDYLH+++KY+RFEKRHRNMSVH SP FRDVE GD+V
Sbjct: 64 RIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGDIV 123
Query: 162 TVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
T+GECRPLSKTVRFNVLKV+KG G+KK+FKK+
Sbjct: 124 TIGECRPLSKTVRFNVLKVSKGQGAKKSFKKY 155
>sp|P0CX48|RS11B_YEAST 40S ribosomal protein S11-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11B PE=1 SV=1
Length = 156
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 120/150 (80%), Gaps = 2/150 (1%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNVSIR 104
++ERAFQKQP IF K K++ R++K GLGFKTP+ AI+G+YIDKKCPFTG VSIR
Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 105 GRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVG 164
G+IL G V KM RTIVIRR YLHYI KYNR+EKRH+N+ VH+SPAFR V++GD+VTVG
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVG 126
Query: 165 ECRPLSKTVRFNVLKVTKGTG-SKKAFKKF 193
+CRP+SKTVRFNV+KV+ G + K F KF
Sbjct: 127 QCRPISKTVRFNVVKVSAAAGKANKQFAKF 156
>sp|P0CX47|RS11A_YEAST 40S ribosomal protein S11-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS11A PE=1 SV=1
Length = 156
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/150 (65%), Positives = 120/150 (80%), Gaps = 2/150 (1%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNVSIR 104
++ERAFQKQP IF K K++ R++K GLGFKTP+ AI+G+YIDKKCPFTG VSIR
Sbjct: 8 QSERAFQKQPHIFNNPKVKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTGLVSIR 67
Query: 105 GRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVG 164
G+IL G V KM RTIVIRR YLHYI KYNR+EKRH+N+ VH+SPAFR V++GD+VTVG
Sbjct: 68 GKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR-VQVGDIVTVG 126
Query: 165 ECRPLSKTVRFNVLKVTKGTG-SKKAFKKF 193
+CRP+SKTVRFNV+KV+ G + K F KF
Sbjct: 127 QCRPISKTVRFNVVKVSAAAGKANKQFAKF 156
>sp|P79013|RS11_SCHPO 40S ribosomal protein S11 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rps11a PE=2 SV=2
Length = 152
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/149 (66%), Positives = 114/149 (76%), Gaps = 4/149 (2%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNVSIR 104
++ERAFQKQP IF K K R++K VGLGFKTP EAI G Y+DKKCPF G VSIR
Sbjct: 8 QSERAFQKQPHIFQNAK---KGAGRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVGQVSIR 64
Query: 105 GRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVG 164
GRIL G V KM RTI+IRR+YLH+I KYNR+EKRH+N++ H+SPAFR E GDVVTVG
Sbjct: 65 GRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINE-GDVVTVG 123
Query: 165 ECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
+CRPLSKTVRFNVL+V K T K F KF
Sbjct: 124 QCRPLSKTVRFNVLRVVKHTEGPKQFGKF 152
>sp|P17093|RS11_SOYBN 40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2
Length = 159
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 119/154 (77%), Gaps = 9/154 (5%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSL-----RYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TE+AF KQP +FL+ K T K K R+ K++GLGFKTPREAI+GTYIDKKCPFTG
Sbjct: 4 QTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 63
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
NVSIRGRIL G KM RTI++RR+YLH+IKKY R+EKRH N+ H+SPAFR V+ GD
Sbjct: 64 NVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFR-VKEGD 122
Query: 160 VVTVGECRPLSKTVRFNVLKVT---KGTGSKKAF 190
V +G+CRPLSKTVRFNVLKV +G+KKAF
Sbjct: 123 HVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAF 156
>sp|Q54S90|RS11_DICDI 40S ribosomal protein S11 OS=Dictyostelium discoideum GN=rps11 PE=1
SV=1
Length = 155
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/152 (61%), Positives = 117/152 (76%), Gaps = 4/152 (2%)
Query: 45 ETERAFQKQPTIFLAR---KPTYKKKSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGNV 101
+ E+AFQKQ F R K + K+ +RY+K +GLG++TP++AI+GTYIDKKCPFT +V
Sbjct: 5 QAEKAFQKQQVSFKNRFQLKASKGKEGIRYYKNIGLGYRTPKDAIEGTYIDKKCPFTSDV 64
Query: 102 SIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVV 161
SIRG IL G V KM+RT+V+RR+YLHYIKKYNRFEKRH N+ H+SPAF +V+ GD V
Sbjct: 65 SIRGAILRGTVISTKMRRTLVVRRNYLHYIKKYNRFEKRHSNIPAHVSPAF-NVKEGDSV 123
Query: 162 TVGECRPLSKTVRFNVLKVTKGTGSKKAFKKF 193
T+G+CRPLSKTVRFNV+K SKK FK F
Sbjct: 124 TIGQCRPLSKTVRFNVIKHDISAASKKQFKAF 155
>sp|Q9M5M1|RS11_EUPES 40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1
Length = 159
Score = 187 bits (474), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/154 (64%), Positives = 115/154 (74%), Gaps = 9/154 (5%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSL-----RYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TE+AF KQP +FLA K T K K R+ K++GLGFKTPREAIDGTYIDKKCPFTG
Sbjct: 4 QTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCPFTG 63
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
VSIRGRIL G KM RTI++RR+YLH+IKKY R+EKRH N+ H+SP FR V+ GD
Sbjct: 64 TVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFR-VKEGD 122
Query: 160 VVTVGECRPLSKTVRFNVLKVT---KGTGSKKAF 190
V +G+CRPLSKTVRFNVLKV G KKAF
Sbjct: 123 HVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAF 156
>sp|O65569|RS112_ARATH 40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2
SV=2
Length = 159
Score = 186 bits (472), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/154 (62%), Positives = 116/154 (75%), Gaps = 9/154 (5%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSL-----RYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TE+AF KQP +FL+ K + K K R+ K +GLGFKTPREAI+GTYID+KCPFTG
Sbjct: 4 QTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCPFTG 63
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
VSIRGRIL G KMQRTI++RRDYLH++KKY R+EKRH N+ H+SP FR V+ GD
Sbjct: 64 TVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFR-VKEGD 122
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGS---KKAF 190
VT+G+CRPLSKTVRFNVLKV S KKAF
Sbjct: 123 RVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAF 156
>sp|P16181|RS111_ARATH 40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2
SV=1
Length = 160
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/153 (61%), Positives = 114/153 (74%), Gaps = 7/153 (4%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSL-----RYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TE+AF KQP +FL+ K + K K R+ K +GLGFKTPREAIDG Y+DKKCPFTG
Sbjct: 4 QTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCPFTG 63
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
VSIRGRIL G KMQRTI++RRDYLH++KKY R+EKRH N+ H+SP FR V+ GD
Sbjct: 64 TVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFR-VKEGD 122
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGSKKAFKK 192
+ +G+CRPLSKTVRFNVLKV GS +F K
Sbjct: 123 HIIIGQCRPLSKTVRFNVLKVIPA-GSSSSFGK 154
>sp|P42733|RS113_ARATH 40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2
SV=2
Length = 159
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 113/154 (73%), Gaps = 9/154 (5%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSL-----RYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TE+AF KQP +FL+ K + K K R+ K +GLGFKTPREAIDG YID KCPFTG
Sbjct: 4 QTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCPFTG 63
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
VSIRGRIL G KMQRTI++RR+YLH++KKY R+EKRH N+ H+SP FR V+ GD
Sbjct: 64 TVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFR-VKEGD 122
Query: 160 VVTVGECRPLSKTVRFNVLKVTKGTGS---KKAF 190
V +G+CRPLSKTVRFNVLKV S KKAF
Sbjct: 123 HVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAF 156
>sp|P42756|RS11_DUNTE 40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2
SV=1
Length = 157
Score = 181 bits (458), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 112/155 (72%), Gaps = 7/155 (4%)
Query: 45 ETERAFQKQPTIFLARKPTYKK----KSLRYHKTVGLGFKTPREAIDGTYIDKKCPFTGN 100
+TE+AFQKQ + K KK R+ K VGL FKTP+EAIDG Y+DKKCPFTGN
Sbjct: 4 QTEKAFQKQVGVTGCFKSKEKKAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCPFTGN 63
Query: 101 VSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGDV 160
VSIRGRIL G+V+ KM RTI++RRDYLH+I KY R+EKRH N+ H+SP FR V GD
Sbjct: 64 VSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFR-VRDGDT 122
Query: 161 VTVGECRPLSKTVRFNVLKVTKGTGS--KKAFKKF 193
V +G+CRPLSKT+RFNVL+V G+ KK+F F
Sbjct: 123 VIIGQCRPLSKTIRFNVLRVIPQAGATGKKSFSGF 157
>sp|P25460|RS11_MAIZE 40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1
Length = 159
Score = 177 bits (449), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 88/141 (62%), Positives = 110/141 (78%), Gaps = 6/141 (4%)
Query: 45 ETERAFQKQPTIFLARKPTYKKKSL-----RYHKTVGLGFKTPREAIDGTYIDKKCPFTG 99
+TE+AF KQP +FL+ K + K K R+ K++GLGFKTPREAI+GTYIDKKCPFTG
Sbjct: 4 QTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFTG 63
Query: 100 NVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPAFRDVEIGD 159
VSIRGRI+ G KM RTI++RR+YLH++KKY R+EKRH N+ H+SP FR V+ GD
Sbjct: 64 TVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 122
Query: 160 VVTVGECRPLSKTVRFNVLKV 180
V +G+CRPLSKTVRFNV+KV
Sbjct: 123 HVIIGQCRPLSKTVRFNVVKV 143
>sp|B8GKE2|RS17_METPE 30S ribosomal protein S17P OS=Methanosphaerula palustris (strain
ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps17p PE=3 SV=1
Length = 108
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL + P E D CPF GN+S+RG+++ G V +M TIV+ RDYLHY++
Sbjct: 3 RNIGLNVQPPVEECQ----DVNCPFHGNLSVRGQVITGKVVSDRMLGTIVVGRDYLHYVR 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTK 182
KY R+EKR + H P + V++GD+V + ECRP+SK+ F V++V K
Sbjct: 59 KYKRYEKRSSKLHAHNPPCLQ-VKVGDIVKIAECRPISKSTTFVVVEVQK 107
>sp|Q8TRT8|RS17_METAC 30S ribosomal protein S17P OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=rps17p PE=3
SV=1
Length = 109
Score = 96.7 bits (239), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL P E D Y CPF G + +RG+IL+G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLK 179
KY R+EKR + H +PA ++GD+VT+ ECRP+SKT + V+K
Sbjct: 59 KYQRYEKRRSKIHAH-NPACISAKVGDIVTIAECRPISKTKSYVVVK 104
>sp|Q8TW21|RS17_METKA 30S ribosomal protein S17P OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rps17p PE=3 SV=1
Length = 118
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 5/113 (4%)
Query: 70 RYHKTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLH 129
R K +GLG K PR D D CPF GN+ +RG IL G+V +M +T+++ R+Y
Sbjct: 6 RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYR 61
Query: 130 YIKKYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTK 182
Y +KY R+E+R + H P D + GD V + ECRPLSKT F V++V +
Sbjct: 62 YDRKYERWERRRSRIPAHNPPCI-DAQEGDKVRIAECRPLSKTKSFVVIEVLE 113
>sp|Q8PV41|RS17_METMA 30S ribosomal protein S17P OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=rps17p PE=3 SV=2
Length = 109
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 5/107 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL P E D Y CPF G + +RG+IL+G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLK 179
KY R+EKR + H +PA ++GD+VT+ ECRP+SKT F V+K
Sbjct: 59 KYQRYEKRRSKIHAH-NPACISAKVGDIVTIVECRPISKTKSFVVVK 104
>sp|A7I5P8|RS17_METB6 30S ribosomal protein S17P OS=Methanoregula boonei (strain 6A8)
GN=rps17p PE=3 SV=1
Length = 108
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL + P++ D CPF G + +RG+++ G V KM T+V+ RDYLHY++
Sbjct: 3 QNIGLNVQPPKQECK----DVNCPFHGTLPVRGQVITGKVVSDKMMGTVVVARDYLHYVR 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTK 182
KYNR+EKR + H P + ++GD+V + ECRPLSK+ + V++V +
Sbjct: 59 KYNRYEKRISKLHAHNPPCIQ-AKVGDLVKIAECRPLSKSTTYVVVEVQQ 107
>sp|A2SPL1|RS17_METLZ 30S ribosomal protein S17P OS=Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z) GN=rps17p PE=3 SV=1
Length = 108
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 70/110 (63%), Gaps = 5/110 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
K +GL P + D D CPF G++ +RG+++ G V +MQ T+V+ R++LH ++
Sbjct: 3 KNIGLNVAVPEKDCD----DVNCPFHGSLPVRGQVITGKVVSERMQGTVVVERNFLHKVQ 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTK 182
KY+R+EKR + H++P + +IGD V + ECRPL+KT + V++V K
Sbjct: 59 KYDRYEKRSSKIHAHMAPCL-NAKIGDEVKIAECRPLNKTTSYVVVEVIK 107
>sp|O24786|RS17_HALSA 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rps17p PE=3 SV=1
Length = 109
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 74 TVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKK 133
+GL P +GT D+ CPF GN+S+RG++L G V M++T+V+ R+Y ++ K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 134 YNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTKG 183
Y+R+ KR + H +P D+ +GD V++ E RPLSKT V+++T G
Sbjct: 58 YDRYMKRRSRVPAH-APECFDISVGDTVSIAETRPLSKTKSHVVVEITDG 106
>sp|B0R665|RS17_HALS3 30S ribosomal protein S17P OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=rps17p PE=3 SV=1
Length = 109
Score = 90.9 bits (224), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 74 TVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKK 133
+GL P +GT D+ CPF GN+S+RG++L G V M++T+V+ R+Y ++ K
Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57
Query: 134 YNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTKG 183
Y+R+ KR + H +P D+ +GD V++ E RPLSKT V+++T G
Sbjct: 58 YDRYMKRRSRVPAH-APECFDISVGDTVSIAETRPLSKTKSHVVVEITDG 106
>sp|Q46GA4|RS17_METBF 30S ribosomal protein S17P OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=rps17p PE=3 SV=1
Length = 109
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL P E + +Y CPF G +S+RG+IL+G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECNDSY----CPFHGTLSVRGQILVGTVVSSKMDNTVVIERQYMKLVP 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLK 179
KY R+EKR + H P ++GD+VT+ ECR +SKT + V+K
Sbjct: 59 KYQRYEKRRSKVHAHNPPCI-SAKVGDIVTIAECRRISKTKSYVVVK 104
>sp|A3CT06|RS17_METMJ 30S ribosomal protein S17P OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rps17p PE=3 SV=1
Length = 108
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL P + D CPF G + +RG+++ G V +M T+V+ R++LHY+K
Sbjct: 3 RNIGLDVPIPETECE----DVNCPFHGTLPVRGQVITGKVVSDRMNGTVVVEREFLHYVK 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKV 180
KY R+EKR H +P + +GDVV + ECRPLSKT F V++V
Sbjct: 59 KYKRYEKRRSRYHAHSTPCI-NAGVGDVVRIAECRPLSKTTNFVVVEV 105
>sp|Q2FT32|RS17_METHJ 30S ribosomal protein S17P OS=Methanospirillum hungatei (strain
JF-1 / DSM 864) GN=rps17p PE=3 SV=1
Length = 108
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL P + D CPF G + +RG+++ G V KM ++V++RDYLH+++
Sbjct: 3 RDIGLNVPVPEKDCS----DVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHFVR 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTKG 183
KY R+EKR + H P +GD+V++ ECRPLSKT + V++V +
Sbjct: 59 KYQRYEKRSSKIHAHNPPCLH-ARVGDMVSIAECRPLSKTKTYVVVEVNRA 108
>sp|Q12ZU2|RS17_METBU 30S ribosomal protein S17P OS=Methanococcoides burtonii (strain DSM
6242) GN=rps17p PE=3 SV=1
Length = 109
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
K +GL P + D D CPF G + +RG+I +G V KM RT+VI++ I
Sbjct: 3 KDIGLDIPEPTKECD----DINCPFHGELPVRGQIHVGTVVSAKMDRTVVIQQRREKLIN 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLK 179
KY R+EKR + H P D ++GD+VT+ ECRPLSKT + V+K
Sbjct: 59 KYQRYEKRQSKIHAHNPPCI-DAKVGDIVTIAECRPLSKTKSYVVVK 104
>sp|P12741|RS17_HALMA 30S ribosomal protein S17P OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps17p PE=1
SV=3
Length = 112
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 74 TVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKK 133
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y + K
Sbjct: 2 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 57
Query: 134 YNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKV 180
Y+RF KR + H +P D+ +GD VT+ ECRPLSKT V+ V
Sbjct: 58 YDRFMKRRSRVPAH-APDCLDLAVGDTVTIAECRPLSKTKSHVVVGV 103
>sp|P54036|RS17_METJA 30S ribosomal protein S17P OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps17p PE=3 SV=1
Length = 117
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +G+ K P D DK CPF GN+ +RG+ +G+V K +T++I+R+ + YIK
Sbjct: 4 RNIGIQVKAPEVECD----DKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIK 59
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLK 179
KY R+E+R ++ H P +GD+V V ECRP+SKT F V++
Sbjct: 60 KYERYERRTTKLAAHNPPCIH-ARVGDIVRVMECRPISKTKAFVVVE 105
>sp|Q0W1X9|RS17_UNCMA 30S ribosomal protein S17P OS=Uncultured methanogenic archaeon RC-I
GN=rps17p PE=3 SV=1
Length = 111
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 64/109 (58%), Gaps = 5/109 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
K +GL K P+ + D +CPF G++++RG+I G V KM +++V+ R+YL
Sbjct: 3 KDIGLNVKAPKTECN----DPQCPFHGSLAVRGQIFEGTVVSAKMSKSVVVSREYLKRDL 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVT 181
KY+R+EKR + H P E GD V + ECRPLSKT F V++V
Sbjct: 59 KYDRYEKRRSKLHAHNPPCINAKE-GDKVVIAECRPLSKTKTFVVVEVA 106
>sp|Q6LXE4|RS17_METMP 30S ribosomal protein S17P OS=Methanococcus maripaludis (strain S2
/ LL) GN=rps17p PE=3 SV=1
Length = 109
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 64/108 (59%), Gaps = 5/108 (4%)
Query: 75 VGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKY 134
+G+ K P + D CPF G +S+RG+I GIV K TIVI+R+ YI KY
Sbjct: 4 IGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYISKY 59
Query: 135 NRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTK 182
R+EKR ++ H +PA ++GD V V ECRP+SKT F V++ T+
Sbjct: 60 ERYEKRTTSLVAH-NPACIKAKVGDTVKVMECRPISKTKSFVVIEKTE 106
>sp|Q2NFW6|RS17_METST 30S ribosomal protein S17P OS=Methanosphaera stadtmanae (strain DSM
3091) GN=rps17p PE=3 SV=1
Length = 106
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Query: 75 VGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKY 134
VG+ K P + D CPF G +S+RG+++ G V K RTI + R + YI K+
Sbjct: 2 VGINVKQPEKECH----DPNCPFHGELSVRGQVIEGTVTSDKADRTITVERSFYKYINKF 57
Query: 135 NRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTKG 183
R+EKR+ + H P DV++GD V + ECR LSKT F +++V +G
Sbjct: 58 ERYEKRNSKIKAH-KPDCLDVKVGDSVKIAECRQLSKTKHFVLVEVKEG 105
>sp|Q9YF81|RS17_AERPE 30S ribosomal protein S17P OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps17p
PE=3 SV=2
Length = 114
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 92 DKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPA 151
D CP+ G + +RG +L G+V K + +R +V++ YL+Y KKYNR+E+R + + HL P
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHL-PD 82
Query: 152 FRDVEIGDVVTVGECRPLSKTVRFNVLKV 180
V+ GDVV +GE P+SKTV+F VL V
Sbjct: 83 CISVKEGDVVVIGETMPISKTVKFTVLGV 111
>sp|O26120|RS17_METTH 30S ribosomal protein S17P OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps17p PE=3 SV=1
Length = 106
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 75 VGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKY 134
VG+ P+ D CPF G++ +RG+IL G V K +RT+ + R + +I+KY
Sbjct: 2 VGIDVPEPKSKCS----DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKY 57
Query: 135 NRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKV 180
R+EKR + H P DV +GD V + ECRPLSKT F V++V
Sbjct: 58 ERYEKRKSKIKAH-KPDCIDVRVGDTVKIAECRPLSKTKNFVVVEV 102
>sp|P14042|RS17_METVA 30S ribosomal protein S17P OS=Methanococcus vannielii GN=rps17p
PE=3 SV=1
Length = 109
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 75 VGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKY 134
+G+ K P + D CPF G +S+RG+I G+V K TIVI+R+ YI KY
Sbjct: 4 IGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYISKY 59
Query: 135 NRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTK 182
R+EKR ++ H P + + GDVV V ECRP+SKT F V++ T+
Sbjct: 60 ERYEKRTTSLVAHNPPCI-NAKTGDVVKVMECRPVSKTKSFVVIEKTE 106
>sp|Q9V1U5|RS17_PYRAB 30S ribosomal protein S17P OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps17p PE=3 SV=2
Length = 113
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL + P E D D KCP+ G++ I GR+ GIV K ++T+ + R Y HY+K
Sbjct: 3 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKV 180
KY R+E R + H P + ++GD V + E RPLSKT F V+ V
Sbjct: 59 KYERYELRRSRIHAHNPPCI-NAKVGDRVLIAETRPLSKTKHFVVVAV 105
>sp|O59426|RS17_PYRHO 30S ribosomal protein S17P OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps17p PE=3 SV=1
Length = 116
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL + P E D D KCP+ G++ I GR+ GIV K ++T+ + R Y HY+K
Sbjct: 6 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 61
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKV 180
KY R+E R + H P + ++GD V + E RPLSKT F V+ V
Sbjct: 62 KYERYELRRSRIHAHNPPCI-NAKVGDRVLIAETRPLSKTKHFVVVAV 108
>sp|Q975I9|RS17_SULTO 30S ribosomal protein S17P OS=Sulfolobus tokodaii (strain DSM 16993
/ JCM 10545 / NBRC 100140 / 7) GN=rps17p PE=3 SV=2
Length = 113
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 73 KTVGL-GFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYI 131
K +G+ G P + D D CPF GN+ +RG IL G + + + ++T V+ RDYL Y
Sbjct: 9 KNIGIEGVNPPSKTCD----DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLFYD 64
Query: 132 KKYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVL 178
KY R+E+R + VH+ P DV+ GD V + ECRP++K+V F V+
Sbjct: 65 TKYKRYERRRSRIHVHIPPCL-DVKEGDNVIIAECRPIAKSVSFVVI 110
>sp|Q5JDH9|RS17_PYRKO 30S ribosomal protein S17P OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps17p PE=3 SV=1
Length = 114
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL + P E + D KCP+ GN+ I GR + GIV K ++T+V+ R Y HY+K
Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLK 57
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTK 182
KY R+E R + H +P + ++GD V + E RP+SKT + V+ V +
Sbjct: 58 KYERYELRKSKVHAH-NPECINAKVGDKVLIAETRPISKTKSWVVVAVLQ 106
>sp|Q8U008|RS17_PYRFU 30S ribosomal protein S17P OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps17p PE=1 SV=1
Length = 113
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +GL + P E D D KCP+ GN+ I GR+ GIV K ++T+ + R Y Y+
Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLN 58
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKV 180
KY R+E R + H P + ++GD V + E RPLSKT F V+ V
Sbjct: 59 KYERYELRRSKIHAHNPPCI-NAKVGDKVLIAETRPLSKTKHFVVVAV 105
>sp|Q9UX98|RS17_SULSO 30S ribosomal protein S17P OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps17p PE=3 SV=1
Length = 114
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 92 DKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIKKYNRFEKRHRNMSVHLSPA 151
D+ CP+ G++ +RG L G++ K + + VI R YL+Y KY R+E+R + H+ P
Sbjct: 25 DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPC 84
Query: 152 FRDVEIGDVVTVGECRPLSKTVRFNVL 178
+V GD V +GECRPLSK++ F VL
Sbjct: 85 I-NVREGDKVIIGECRPLSKSISFVVL 110
>sp|Q6L1B8|RS17_PICTO 30S ribosomal protein S17P OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=rps17p
PE=3 SV=1
Length = 106
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 5/107 (4%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +G+ K P + D KCPF GN+ I G+I++G V KM +IV++R+ IK
Sbjct: 2 ENIGIDVKKPERTCN----DPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLIK 57
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLK 179
KY R+E + HL P DV GD V + ECR L+KT+ F V++
Sbjct: 58 KYERYETKISKFHAHL-PGCIDVRPGDRVKIAECRKLAKTISFVVVE 103
>sp|O28363|RS17_ARCFU 30S ribosomal protein S17P OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps17p PE=3 SV=1
Length = 111
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Query: 73 KTVGLGFKTPREAIDGTYIDKKCPFTGNVSIRGRILIGIVRKMKMQRTIVIRRDYLHYIK 132
+ +G+ K P + D+ CPF G +S+RG++L G V K+ +T VI R+ + Y+
Sbjct: 2 RDIGIDVKPPERECE----DENCPFHGTLSVRGQLLRGKVVKV-YGKTAVIERELIRYVP 56
Query: 133 KYNRFEKRHRNMSVHLSPAFRDVEIGDVVTVGECRPLSKTVRFNVLKVTKGTGSK 187
K+ R+ K+ + H +P GD+VT+GECRP+SKT F +L+V G+K
Sbjct: 57 KFERYMKKRSKLHAH-NPRCIRARPGDIVTIGECRPISKTKSFVILEVVGNEGNK 110
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,162,913
Number of Sequences: 539616
Number of extensions: 2924618
Number of successful extensions: 6786
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 6166
Number of HSP's gapped (non-prelim): 762
length of query: 193
length of database: 191,569,459
effective HSP length: 111
effective length of query: 82
effective length of database: 131,672,083
effective search space: 10797110806
effective search space used: 10797110806
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)