Query psy10005
Match_columns 117
No_of_seqs 118 out of 1137
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 15:27:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10005.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10005hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h8k_A Ubiquitin-conjugating e 100.0 7.3E-41 2.5E-45 234.1 14.4 115 1-115 49-163 (164)
2 2ucz_A UBC7, ubiquitin conjuga 100.0 8.1E-41 2.8E-45 234.2 13.1 115 1-115 50-164 (165)
3 2aak_A UBC1, ubiquitin conjuga 100.0 3.3E-39 1.1E-43 223.4 12.8 104 1-117 49-152 (152)
4 4gpr_A Ubiquitin-conjugating e 100.0 4.6E-39 1.6E-43 222.5 12.7 102 1-115 49-150 (151)
5 2r0j_A Ubiquitin carrier prote 100.0 4.7E-39 1.6E-43 222.0 12.0 103 1-116 46-148 (149)
6 2ayv_A Ubiquitin-conjugating e 100.0 6.9E-39 2.3E-43 224.8 12.6 101 1-114 66-166 (166)
7 1ayz_A UBC2, ubiquitin-conjuga 100.0 7.9E-39 2.7E-43 225.0 12.8 102 1-115 49-150 (169)
8 2c2v_B Ubiquitin-conjugating e 100.0 2.6E-39 9E-44 224.4 10.1 103 1-116 50-152 (154)
9 1z2u_A Ubiquitin-conjugating e 100.0 1.2E-38 4.1E-43 220.1 12.6 102 1-115 49-150 (150)
10 2c4o_A Ubiquitin-conjugating e 100.0 1.5E-38 5.2E-43 222.8 12.6 102 1-115 64-165 (165)
11 1fxt_A Ubiquitin-conjugating e 100.0 4.1E-39 1.4E-43 222.2 9.5 102 1-115 47-149 (149)
12 3rz3_A Ubiquitin-conjugating e 100.0 5.2E-39 1.8E-43 228.4 10.2 116 1-116 53-174 (183)
13 3fn1_B NEDD8-conjugating enzym 100.0 2.2E-38 7.6E-43 222.1 12.5 108 1-115 59-167 (167)
14 1wzv_A Ubiquitin-conjugating e 100.0 1.5E-38 5.1E-43 220.7 11.5 104 1-116 49-152 (155)
15 1yh2_A HSPC150 protein similar 100.0 2.7E-38 9.1E-43 222.3 12.9 107 1-116 49-155 (169)
16 1zdn_A Ubiquitin-conjugating e 100.0 8.8E-39 3E-43 222.5 10.2 101 1-114 58-158 (158)
17 1jat_A Ubiquitin-conjugating e 100.0 1.2E-38 4.2E-43 221.2 10.5 103 1-116 50-152 (155)
18 2bep_A Ubiquitin-conjugating e 100.0 3.2E-38 1.1E-42 219.9 12.6 102 1-115 56-158 (159)
19 3rcz_B SUMO-conjugating enzyme 100.0 3.8E-38 1.3E-42 220.4 12.6 104 1-115 60-163 (163)
20 2f4z_A Tgtwinscan_2721 - E2 do 100.0 3.9E-38 1.3E-42 225.5 12.6 103 1-116 90-193 (193)
21 2gjd_A Ubiquitin-conjugating e 100.0 4.4E-38 1.5E-42 218.8 12.4 104 1-115 54-157 (157)
22 2e2c_A Ubiquitin conjugating e 100.0 3.9E-38 1.3E-42 218.8 11.8 102 1-116 54-155 (156)
23 2grr_A Ubiquitin-conjugating e 100.0 9.4E-38 3.2E-42 217.9 12.5 105 1-116 57-161 (161)
24 3k9o_A Ubiquitin-conjugating e 100.0 9.9E-38 3.4E-42 224.6 12.8 103 1-116 53-156 (201)
25 1c4z_D UBCH7, ubiquitin conjug 100.0 2.3E-38 8E-43 219.5 8.4 104 1-116 47-150 (154)
26 3bzh_A Ubiquitin-conjugating e 100.0 1.4E-37 4.9E-42 222.8 12.6 102 1-115 93-194 (194)
27 2awf_A Ubiquitin-conjugating e 100.0 3.5E-38 1.2E-42 222.3 8.6 109 1-109 63-172 (172)
28 1tte_A Ubiquitin-conjugating e 100.0 8.4E-38 2.9E-42 227.0 10.4 103 1-116 48-151 (215)
29 2pwq_A Ubiquitin conjugating e 100.0 9.5E-38 3.2E-42 226.9 9.8 103 1-116 68-171 (216)
30 2onu_A Ubiquitin-conjugating e 100.0 1.1E-37 3.7E-42 215.9 8.6 103 1-116 44-148 (152)
31 2z5d_A Ubiquitin-conjugating e 100.0 5.9E-38 2E-42 222.3 7.4 103 1-116 66-170 (179)
32 1i7k_A Ubiquitin-conjugating e 100.0 2.9E-37 9.8E-42 218.8 10.6 102 1-116 75-176 (179)
33 3e46_A Ubiquitin-conjugating e 100.0 1.1E-36 3.6E-41 225.7 12.8 103 1-116 105-208 (253)
34 1y8x_A Ubiquitin-conjugating e 100.0 2.2E-36 7.4E-41 210.9 11.5 99 1-112 49-147 (160)
35 2y9m_A Ubiquitin-conjugating e 100.0 2.9E-36 1E-40 212.4 11.9 103 1-115 63-168 (172)
36 1yf9_A Ubiquitin carrier prote 100.0 6.7E-37 2.3E-41 215.6 8.5 103 1-116 53-157 (171)
37 3o2u_A NEDD8-conjugating enzym 100.0 1.9E-36 6.4E-41 216.4 10.2 100 1-113 78-177 (190)
38 2nvu_C NEDD8-conjugating enzym 100.0 6.9E-36 2.4E-40 211.9 11.9 99 1-112 69-167 (180)
39 1yrv_A Ubiquitin-conjugating l 100.0 6.5E-36 2.2E-40 210.2 8.5 100 1-112 68-168 (169)
40 4ddg_A Ubiquitin-conjugating e 100.0 1.3E-34 4.6E-39 226.1 12.8 103 1-116 48-150 (399)
41 4ds2_A Ubiquitin-conjugating e 100.0 1.3E-32 4.6E-37 192.8 9.0 95 1-108 67-164 (167)
42 3ceg_A Baculoviral IAP repeat- 100.0 9.8E-32 3.4E-36 204.6 8.8 109 1-115 125-243 (323)
43 2q0v_A Ubiquitin-conjugating e 100.0 2.2E-31 7.6E-36 184.9 2.9 84 1-98 70-156 (156)
44 1jat_B Ubiquitin-conjugating e 100.0 1.8E-30 6.3E-35 177.0 0.1 81 1-95 55-138 (138)
45 2a4d_A Ubiquitin-conjugating e 100.0 2.6E-29 9E-34 175.1 5.6 81 1-92 74-156 (160)
46 2hlw_A Ubiquitin-conjugating e 99.9 5.7E-29 1.9E-33 174.9 3.7 81 1-92 84-166 (170)
47 2fo3_A Ubiquitin-conjugating e 99.9 5.9E-28 2E-32 162.1 7.8 72 1-85 51-123 (125)
48 2h2y_A Ubiquitin-conjugating e 99.9 2.3E-27 8E-32 161.3 8.1 70 1-83 65-135 (136)
49 1zuo_A Hypothetical protein LO 99.9 4.9E-28 1.7E-32 172.3 2.4 92 3-114 89-181 (186)
50 2a7l_A Hypothetical ubiquitin- 99.9 2.4E-26 8E-31 156.4 7.9 66 1-79 69-136 (136)
51 2f4w_A Ubiquitin-conjugating e 99.9 2.4E-24 8E-29 153.4 9.7 93 1-105 59-154 (187)
52 3r3q_A Suppressor protein STP2 99.7 3.4E-18 1.2E-22 119.0 7.3 71 1-85 76-161 (162)
53 2z6o_A UFM1-conjugating enzyme 99.7 1.1E-18 3.7E-23 121.4 1.1 74 4-96 84-160 (172)
54 3obq_A Tumor susceptibility ge 99.4 1.2E-13 4.1E-18 94.6 6.0 64 1-79 65-137 (146)
55 3kpa_A Probable ubiquitin fold 99.3 2.2E-13 7.5E-18 93.2 0.7 41 4-44 86-127 (168)
56 2daw_A RWD domain containing p 95.0 0.12 4.2E-06 34.7 7.5 23 4-26 76-98 (154)
57 2ebm_A RWD domain-containing p 94.8 0.028 9.6E-07 36.4 3.7 22 4-25 56-77 (128)
58 2yz0_A Serine/threonine-protei 94.2 0.053 1.8E-06 35.5 4.0 23 4-26 63-85 (138)
59 2day_A Ring finger protein 25; 94.2 0.048 1.6E-06 35.2 3.7 23 4-26 60-82 (128)
60 1ukx_A GCN2, GCN2 EIF2alpha ki 93.4 0.056 1.9E-06 35.3 3.0 22 4-25 64-85 (137)
61 3zqs_A E3 ubiquitin-protein li 93.3 0.27 9.1E-06 34.4 6.4 49 2-78 37-86 (186)
62 2dax_A Protein C21ORF6; RWD do 92.6 0.1 3.5E-06 34.8 3.4 23 4-26 74-96 (152)
63 2ebk_A RWD domain-containing p 92.5 0.059 2E-06 34.9 2.0 22 4-25 57-78 (128)
64 2cwb_A Chimera of immunoglobul 91.4 0.036 1.2E-06 35.6 0.0 35 81-115 21-55 (108)
65 2bum_A Protocatechuate 3,4-dio 47.1 21 0.0007 25.1 3.7 25 1-25 109-138 (209)
66 1zoq_C CREB-binding protein, i 42.6 13 0.00043 19.9 1.5 43 71-115 3-46 (47)
67 3zqs_A E3 ubiquitin-protein li 32.1 58 0.002 22.4 4.0 23 5-27 126-148 (186)
68 2bum_B Protocatechuate 3,4-dio 30.9 29 0.00099 24.9 2.4 25 1-25 134-165 (241)
69 2xsu_A Catechol 1,2 dioxygenas 28.2 34 0.0012 25.5 2.4 25 1-25 187-229 (312)
70 3t63_M 3,4-PCD, protocatechuat 27.2 37 0.0013 24.4 2.4 25 1-25 133-164 (238)
71 1tmx_A Hydroxyquinol 1,2-dioxy 27.2 37 0.0013 25.1 2.4 25 1-25 183-225 (293)
72 3n9t_A PNPC; phospholipid bind 27.1 37 0.0013 25.1 2.4 25 1-25 180-222 (290)
73 2azq_A Catechol 1,2-dioxygenas 26.6 38 0.0013 25.3 2.4 25 1-25 183-225 (311)
74 1kbh_B CREB-binding protein, n 26.4 90 0.0031 17.4 4.8 45 70-115 9-53 (59)
75 3mfq_A TROA, high-affinity zin 26.1 87 0.003 22.4 4.3 49 60-114 105-153 (282)
76 2boy_A 3-chlorocatechol 1,2-di 25.9 41 0.0014 24.3 2.4 25 1-25 153-195 (254)
77 3t63_A 3,4-PCD, protocatechuat 24.4 52 0.0018 22.8 2.7 23 3-25 102-129 (200)
78 3hhy_A 1,2-CTD, catechol 1,2-d 23.9 43 0.0015 24.6 2.2 25 1-25 182-224 (280)
79 1dmh_A 1,2-CTD, catechol 1,2-d 23.9 45 0.0015 24.9 2.4 25 1-25 186-228 (311)
80 3q13_A Spondin-1; FS-domain, m 23.2 57 0.002 23.7 2.8 22 3-26 21-49 (258)
81 3th1_A Chlorocatechol 1,2-diox 22.3 79 0.0027 22.9 3.4 25 1-25 150-192 (260)
82 3k1l_B Fancl; UBC, ring, RWD, 21.4 1E+02 0.0036 23.6 4.0 53 6-83 231-293 (381)
83 2f4m_B UV excision repair prot 21.3 1.1E+02 0.0037 17.1 3.1 20 87-106 37-56 (61)
84 3o5u_A Chlorocatechol 1,2-diox 20.1 73 0.0025 23.0 2.8 16 1-16 155-170 (257)
85 2ccv_A Helix pomatia agglutini 20.0 1.2E+02 0.0042 18.4 3.5 23 4-27 30-52 (101)
No 1
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=7.3e-41 Score=234.10 Aligned_cols=115 Identities=81% Similarity=1.325 Sum_probs=112.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|..+++|+.+++..+++|+|++||++||.+|++||.+
T Consensus 49 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~ 128 (164)
T 3h8k_A 49 EFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAE 128 (164)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcC
Confidence 69999999999999999999999999999999999999999999988889999888999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|+++||+|++||++
T Consensus 129 pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~s~~ 163 (164)
T 3h8k_A 129 PNDESGANVDASKMWRDDREQFYKIAKQIVQKSLG 163 (164)
T ss_dssp CCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999986
No 2
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=8.1e-41 Score=234.15 Aligned_cols=115 Identities=63% Similarity=1.083 Sum_probs=111.7
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|..+++|+++.+...++|+|++||++||.+|++||.+
T Consensus 50 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~ 129 (165)
T 2ucz_A 50 ADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSE 129 (165)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHS
T ss_pred cCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999988888998888889999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|.++||+|+++|++
T Consensus 130 Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~~~~~~~ 164 (165)
T 2ucz_A 130 PNIESGANIDACILWRDNRPEFERQVKLSILKSLG 164 (165)
T ss_dssp CCGGGCCCHHHHHHHHTTHHHHHHHHHHHHHHHTT
T ss_pred CCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986
No 3
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=3.3e-39 Score=223.36 Aligned_cols=104 Identities=41% Similarity=0.807 Sum_probs=100.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|+++|.+||.+|++||.+
T Consensus 49 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~~ 115 (152)
T 2aak_A 49 DGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQN-------------QWSPIYDVAAILTSIQSLLCD 115 (152)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTT-------------SCCTTCCHHHHHHHHHHHHTS
T ss_pred cCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCCEEechhhcC-------------CCCCCCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhccC
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGLD 117 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~~ 117 (117)
|++++|+|.+||++|++|+++|+++||+|+++||..|
T Consensus 116 p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~~ 152 (152)
T 2aak_A 116 PNPNSPANSEAARMYSESKREYNRRVRDVVEQSWTAD 152 (152)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC--
T ss_pred CCCCccccHHHHHHHHHCHHHHHHHHHHHHHHHcccC
Confidence 9999999999999999999999999999999999876
No 4
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=4.6e-39 Score=222.46 Aligned_cols=102 Identities=30% Similarity=0.682 Sum_probs=99.9
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 49 egg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~~ 115 (151)
T 4gpr_A 49 QGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNGVICLDILKD-------------QWSPALTLSRVLLSISSLLTD 115 (151)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEECCCCCCCCcceeEEecCcccceECCCCEEEcccccC-------------CCCCCCcHHHHHHHHHHHhcC
Confidence 6999999999999999999999999999999999999999999975 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|+++||+|+++||.
T Consensus 116 p~~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~ya~ 150 (151)
T 4gpr_A 116 PNPSDPLDPEVANVLRANKKQFEDTAREWTRMYAR 150 (151)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999996
No 5
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=4.7e-39 Score=221.97 Aligned_cols=103 Identities=26% Similarity=0.608 Sum_probs=100.4
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 46 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~~ 112 (149)
T 2r0j_A 46 EGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLGRICLDILKD-------------KWSPALQIRTVLLSIQALLSS 112 (149)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTT-------------TCCTTSCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCCEEechhcCC-------------CCCCCCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++|+++|+++||+|++|||..
T Consensus 113 p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 148 (149)
T 2r0j_A 113 PEPDDPLDSKVAEHFKQDKNDAEHVARQWNKIYANN 148 (149)
T ss_dssp CCTTSCSSCHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCchhHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 999999999999999999999999999999999974
No 6
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=6.9e-39 Score=224.78 Aligned_cols=101 Identities=35% Similarity=0.761 Sum_probs=99.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 66 egG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ICL~iL~~-------------~WsP~~ti~~vL~sI~sll~~ 132 (166)
T 2ayv_A 66 SGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGAICLDILKD-------------QWSPALTISKVLLSISSLLTD 132 (166)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCeEEcccccc-------------cCCCCCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHh
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTL 114 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a 114 (117)
|++++|+|.+||++|++|+++|+++||+|++|||
T Consensus 133 pn~~~Pln~~aa~l~~~d~~~f~~~ar~~~~~~A 166 (166)
T 2ayv_A 133 PNPDDPLVPEIAHLYKSDRMRYDQTAREWSQKYA 166 (166)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999997
No 7
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=7.9e-39 Score=225.03 Aligned_cols=102 Identities=38% Similarity=0.779 Sum_probs=99.8
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|.. .|+|+++|++||.+|++||.+
T Consensus 49 egG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G~ICl~iL~~-------------~WsP~~~i~~vL~si~~ll~~ 115 (169)
T 1ayz_A 49 EDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDILQN-------------RWTPTYDVASILTSIQSLFND 115 (169)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHTC
T ss_pred CCCEEEEEEECcccCCCCCCccccccCCccCCCCCCCeEeehhhcc-------------CCCCcCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|+++||+|+++||.
T Consensus 116 Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~~~a~ 150 (169)
T 1ayz_A 116 PNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150 (169)
T ss_dssp CCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999986
No 8
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-39 Score=224.37 Aligned_cols=103 Identities=27% Similarity=0.600 Sum_probs=98.3
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 50 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~~ 116 (154)
T 2c2v_B 50 EGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKD-------------KWSPALQIRTVLLSIQALLSA 116 (154)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCHHHHT-------------SCCTTCCHHHHHHHHHHHTTS
T ss_pred CCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCeEEchhccC-------------CCCCCCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999974 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++|+++|.++||+|++|||..
T Consensus 117 pn~~~p~n~~aa~~~~~d~~~f~~~ar~~~~~~a~~ 152 (154)
T 2c2v_B 117 PNPDDPLANDVAEQWKTNEAQAIETARAWTRLYAMN 152 (154)
T ss_dssp CCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999974
No 9
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=1.2e-38 Score=220.10 Aligned_cols=102 Identities=35% Similarity=0.771 Sum_probs=99.6
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||.+||.+|++||.+
T Consensus 49 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~~ 115 (150)
T 1z2u_A 49 QGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRS-------------QWSPALTISKVLLSICSLLCD 115 (150)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCCeEeeccccC-------------CCCCCCCHHHHHHHHHHHhhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|+++||+|++|||.
T Consensus 116 pn~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~ 150 (150)
T 1z2u_A 116 PNPDDPLVPEIARIYKTDRERYNQLAREWTQKYAM 150 (150)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999984
No 10
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.5e-38 Score=222.80 Aligned_cols=102 Identities=35% Similarity=0.777 Sum_probs=99.7
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 64 egg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ICl~iL~~-------------~W~P~~ti~~vL~si~~ll~~ 130 (165)
T 2c4o_A 64 QGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRS-------------QWSPALTISKVLLSICSLLCD 130 (165)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred cCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCeEeehhhcC-------------CCCCcCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|+++||+|+++||.
T Consensus 131 pn~~~P~n~~aa~~~~~d~~~y~~~ar~~~~~~a~ 165 (165)
T 2c4o_A 131 PNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAM 165 (165)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHTTC
T ss_pred CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999984
No 11
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=4.1e-39 Score=222.23 Aligned_cols=102 Identities=33% Similarity=0.664 Sum_probs=99.5
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|++||++||.+|++||.
T Consensus 47 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~ 113 (149)
T 1fxt_A 47 EGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKN-------------AWSPVITLKSALISLQALLQ 113 (149)
T ss_dssp CSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCCBCCHHHHT-------------SCCTTCCHHHHHHHHHHHHH
T ss_pred CCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCeEeCCcCCC-------------CCCCCCcHHHHHHHHHHHHh
Confidence 69999999999999999999999999999999998 99999999975 89999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
+|++++|+|.+||++|++|+++|.++||+|++|||+
T Consensus 114 ~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~~~~~a~ 149 (149)
T 1fxt_A 114 SPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYAS 149 (149)
T ss_dssp SCCSSSCSSHHHHHHHHHCSSHHHHHHHHHHHHHCC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999985
No 12
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=5.2e-39 Score=228.43 Aligned_cols=116 Identities=50% Similarity=0.781 Sum_probs=99.0
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|..+++|+++++..+++|+|++||++||++|++||.+
T Consensus 53 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~ 132 (183)
T 3rz3_A 53 EGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNE 132 (183)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTSBBCCTTC--------------CCCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCCcEehhhcCcccccccccccccCCCCCcCcHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999988889988888889999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHH------CHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWRE------DREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~------~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++ |+++|+++||+++++|+..
T Consensus 133 Pn~~~p~n~~aa~~~~~~~~~~~~~~~y~~~v~~~v~~s~~~ 174 (183)
T 3rz3_A 133 PNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVD 174 (183)
T ss_dssp CCCSSCSSHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCcccHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 7889999999999999764
No 13
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=2.2e-38 Score=222.14 Aligned_cols=108 Identities=21% Similarity=0.527 Sum_probs=101.4
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|..+ +..+++|+|++||++||.+|++||.+
T Consensus 59 egg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~iL~~~-------~~~~~~W~p~~~i~~vl~~i~~ll~~ 131 (167)
T 3fn1_B 59 QGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETGEICLSLLREH-------SIDGTGWAPTRTLKDVVWGLNSLFTD 131 (167)
T ss_dssp TTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTCCBCCGGGSBC-------SSSTTSBCTTCCHHHHHHHHHHTTTT
T ss_pred CCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCCEEechhhccC-------CCCCCCCCCcCcHHHHHHHHHHHHcC
Confidence 69999999999999999999999999999999999999999999863 22345899999999999999999999
Q ss_pred -CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 -PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 -p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|.++||+|++|||.
T Consensus 132 ~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~~~~~A~ 167 (167)
T 3fn1_B 132 LLNFDDPLNIEAAEHHLRDKEDFRNKVDDYIKRYAR 167 (167)
T ss_dssp TCCSSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCcchhHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 79999999999999999999999999999999984
No 14
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.5e-38 Score=220.67 Aligned_cols=104 Identities=25% Similarity=0.570 Sum_probs=100.0
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. ++|+|+++|.+||.+|++||.+
T Consensus 49 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~------------~~W~p~~~i~~vl~~i~~ll~~ 116 (155)
T 1wzv_A 49 HLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENGQICLPIISS------------ENWKPCTKTCQVLEALNVLVNR 116 (155)
T ss_dssp GGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBCCCGGGCT------------TTCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCCeEeecCCCc------------cCCCCCCcHHHHHHHHHHHHhC
Confidence 6899999999999999999999999999999999999999999932 3899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++|+++|+++||+|+++||..
T Consensus 117 p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 152 (155)
T 1wzv_A 117 PNIREPLRMDLADLLTQNPELFRKNAEEFTLRFGVD 152 (155)
T ss_dssp CCSSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHCEE
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999975
No 15
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.7e-38 Score=222.27 Aligned_cols=107 Identities=26% Similarity=0.595 Sum_probs=101.2
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|..++ +++|+|++||++||.+|++||.+
T Consensus 49 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G~iCl~iL~~~~---------~~~W~p~~~i~~vL~si~~ll~~ 119 (169)
T 1yh2_A 49 EKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPP---------KGAWRPSLNIATVLTSIQLLMSE 119 (169)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGSCTT---------TSCCCTTSCHHHHHHHHHHHHHS
T ss_pred cCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCCeEecccccCCc---------ccCCCCCCcHHHHHHHHHHHHhC
Confidence 699999999999999999999999999999999999999999998421 13899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++|+++|.++||+|+++||..
T Consensus 120 p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~~~~a~~ 155 (169)
T 1yh2_A 120 PNPDDPLMADISSEFKYNKPAFLKNARQWTEKHARQ 155 (169)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCcchHhHHHHHHHHhhHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999999999999964
No 16
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=8.8e-39 Score=222.54 Aligned_cols=101 Identities=32% Similarity=0.609 Sum_probs=99.0
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|+++|++||.+|++||.+
T Consensus 58 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vL~~i~~ll~~ 124 (158)
T 1zdn_A 58 AGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKR-------------DWTAELGIRHVLLTIKCLLIH 124 (158)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTSBBCHHHHTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred cCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCCEEehhhcCC-------------CCCCCCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHh
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTL 114 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a 114 (117)
|++++|+|.+||++|++|+++|+++||+||+|||
T Consensus 125 pn~~~p~n~~aa~~~~~d~~~f~~~a~~~t~~~A 158 (158)
T 1zdn_A 125 PNPESALNEEAGRLLLENYEEYAARARLLTEIHG 158 (158)
T ss_dssp CCGGGCSSHHHHHHHHHCHHHHHHHHHHHHHHHC
T ss_pred CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999997
No 17
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.2e-38 Score=221.15 Aligned_cols=103 Identities=30% Similarity=0.630 Sum_probs=100.3
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|+++|.+||.+|++||.+
T Consensus 50 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~~ 116 (155)
T 1jat_A 50 EDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKT-------------NWSPALQIRTVLLSIQALLAS 116 (155)
T ss_dssp TTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCCBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred cCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCCEEEchhhcc-------------CCCCCCCHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999975 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++|+++|+++||+|++|||..
T Consensus 117 p~~~~p~n~~aa~~~~~~~~~f~~~~r~~~~~~a~~ 152 (155)
T 1jat_A 117 PNPNDPLANDVAEDWIKNEQGAKAKAREWTKLYAKK 152 (155)
T ss_dssp CCTTSTTCCTTHHHHHHCHHHHHHHHHHHHHHHSEE
T ss_pred CCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999964
No 18
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=3.2e-38 Score=219.88 Aligned_cols=102 Identities=25% Similarity=0.591 Sum_probs=99.4
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|++||.+||.+|++||.
T Consensus 56 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~iCl~iL~~-------------~W~p~~~i~~vl~~i~~ll~ 122 (159)
T 2bep_A 56 EGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKD-------------QWAAAMTLRTVLLSLQALLA 122 (159)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHH
T ss_pred cCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCEEeChhhhc-------------cCCCCCcHHHHHHHHHHHHh
Confidence 69999999999999999999999999999999995 99999999985 89999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
+|++++|+|.+||++|++|+++|.++||+|++|||.
T Consensus 123 ~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~ 158 (159)
T 2bep_A 123 AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAG 158 (159)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999986
No 19
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=3.8e-38 Score=220.45 Aligned_cols=104 Identities=37% Similarity=0.748 Sum_probs=99.8
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|... ++|+|++||++||.+|++||.+
T Consensus 60 egg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G~iCl~iL~~~-----------~~W~p~~ti~~vL~~i~~ll~~ 128 (163)
T 3rcz_B 60 EGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEE-----------EGWKPAITIKQILLGIQDLLDD 128 (163)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTSBBCCGGGCTT-----------TTCCTTCCHHHHHHHHHHHHTS
T ss_pred CCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCCcEeccccCCC-----------CCcCCcCcHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999751 3699999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|.++||+|++|||.
T Consensus 129 P~~~~p~n~~aa~~~~~d~~~y~~~~r~~~~~ya~ 163 (163)
T 3rcz_B 129 PNIASPAQTEAYTMFKKDKVEYEKRVRAQARENAP 163 (163)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999984
No 20
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-38 Score=225.54 Aligned_cols=103 Identities=32% Similarity=0.604 Sum_probs=99.4
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+. +|.|||++|.. +|+|++||++||.+|++||.
T Consensus 90 egG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~-------------~WsP~~ti~~vL~sI~sll~ 156 (193)
T 2f4z_A 90 EGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGAICLDILKH-------------EWSPALTIRTALLSIQAMLA 156 (193)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTT-------------TCCTTSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCEEECccccc-------------cCCCCCCHHHHHHHHHHHHh
Confidence 69999999999999999999999999999999994 99999999985 89999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
+|++++|+|.+||++|++|+++|+++||+|++|||.+
T Consensus 157 ~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~t~~ya~~ 193 (193)
T 2f4z_A 157 DPVPTDPQDAEVAKMMIENHPLFVQTAKLWTETFAKE 193 (193)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC-
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHccC
Confidence 9999999999999999999999999999999999964
No 21
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=4.4e-38 Score=218.80 Aligned_cols=104 Identities=30% Similarity=0.691 Sum_probs=99.9
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|... ++|+|++||++||.+|++||.+
T Consensus 54 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~-----------~~W~p~~~i~~vl~~i~~ll~~ 122 (157)
T 2gjd_A 54 AGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGTICLSILNED-----------QDWRPAITLKQIVLGVQDLLDS 122 (157)
T ss_dssp TTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSBBCCGGGCTT-----------TTCCTTCCHHHHHHHHHHHHTS
T ss_pred CCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCcEeeecccCC-----------CCCCCCCcHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999851 3799999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|+.++|+|.+||++|++|+++|.++||+|++|||.
T Consensus 123 p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~ 157 (157)
T 2gjd_A 123 PNPNSPAQEPAWRSFSRNKAEYDKKVLLQAKQYSK 157 (157)
T ss_dssp CCTTCCCCHHHHHHHHHCHHHHHHHHHHHHHHTBC
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999984
No 22
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.9e-38 Score=218.84 Aligned_cols=102 Identities=35% Similarity=0.678 Sum_probs=99.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. .|+|++||++||.+|++||.+
T Consensus 54 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vL~si~~ll~~ 120 (156)
T 2e2c_A 54 ESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKE-------------NWTASYDVRTILLSLQSLLGE 120 (156)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHTTS
T ss_pred CCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCceEECccccc-------------cCCCCCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++| +|+++|+++||+|+++|++.
T Consensus 121 pn~~~p~n~~aa~~~-~d~~~y~~~~~~~~~~~~~~ 155 (156)
T 2e2c_A 121 PNNASPLNAQAADMW-SNQTEYKKVLHEKYKTAQSD 155 (156)
T ss_dssp CCCSSCSCHHHHHHT-TCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHh-cCHHHHHHHHHHHHHHhccC
Confidence 999999999999999 89999999999999999863
No 23
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=9.4e-38 Score=217.92 Aligned_cols=105 Identities=35% Similarity=0.684 Sum_probs=100.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|... ++|+|+++|++||.+|++||.+
T Consensus 57 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~~-----------~~W~p~~~i~~vl~~i~~ll~~ 125 (161)
T 2grr_A 57 EGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEED-----------KDWRPAITIKQILLGIQELLNE 125 (161)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTSBBCCGGGCTT-----------TTCCTTCCHHHHHHHHHHHHHS
T ss_pred cCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCCeEeehhcCCC-----------CCcCCCCcHHHHHHHHHHHHhC
Confidence 69999999999999999999999999999999999999999999741 3799999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|+.++|+|.+||++|++|+++|+++||+||+|||..
T Consensus 126 p~~~~p~n~~aa~~~~~~~~~y~~~~~~~~~~~a~~ 161 (161)
T 2grr_A 126 PNIQSPAQAEAYTIYCQNRVEYEKRVRAQAKKFAPS 161 (161)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHTCC-
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999863
No 24
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=9.9e-38 Score=224.56 Aligned_cols=103 Identities=25% Similarity=0.581 Sum_probs=99.8
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|++||++||.+|++||.
T Consensus 53 egg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~iCl~iL~~-------------~W~p~~~i~~vL~~i~~ll~ 119 (201)
T 3k9o_A 53 EGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKD-------------QWAAAMTLRTVLLSLQALLA 119 (201)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCeeeCccccc-------------CCCCCCCHHHHHHHHHHHhc
Confidence 69999999999999999999999999999999995 99999999975 89999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 120 ~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~~~~a~~ 156 (201)
T 3k9o_A 120 AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 156 (201)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999963
No 25
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=2.3e-38 Score=219.48 Aligned_cols=104 Identities=29% Similarity=0.687 Sum_probs=98.3
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. ++|+|++|+.+||.+|++||.+
T Consensus 47 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~------------~~W~p~~~i~~vl~~i~~ll~~ 114 (154)
T 1c4z_D 47 DKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISA------------ENWKPATKTDQVIQSLIALVND 114 (154)
T ss_dssp CSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTCBBCCTTTSS------------SSCCTTCCHHHHHHHHHHHHHS
T ss_pred cCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCCEEECCCCCC------------CCCCCCCcHHHHHHHHHHHHcC
Confidence 6999999999999999999999999999999999999999999963 3899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++|+++|+++||+|+++||..
T Consensus 115 p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~~~~a~~ 150 (154)
T 1c4z_D 115 PQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEK 150 (154)
T ss_dssp CCCSSCSCHHHHHHHHTCSSTTHHHHHHHHTTC---
T ss_pred CCCCchhhHHHHHHHHHhHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999964
No 26
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.4e-37 Score=222.80 Aligned_cols=102 Identities=28% Similarity=0.578 Sum_probs=99.6
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.|||++|.. .|+|+++|.+||.+|++||.+
T Consensus 93 egG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~-------------~WsP~~ti~~vL~sI~~ll~~ 159 (194)
T 3bzh_A 93 EGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKD-------------NWSPALTISKVLLSICSLLTD 159 (194)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred cCCEEEEEEECCCcCCCCCccccccCCCccceECCCCceechhhhc-------------cCCCcCcHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999975 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|++++|+|.+||++|++|+++|+++||+|+++||.
T Consensus 160 pnp~~Pln~~aa~l~~~d~~~f~~~ar~~t~~ya~ 194 (194)
T 3bzh_A 160 CNPADPLVGSIATQYMTNRAEHDRMARQWTKRYAT 194 (194)
T ss_dssp CCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHCC
T ss_pred CCCccchhHHHHHHHHHCHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999984
No 27
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.5e-38 Score=222.28 Aligned_cols=109 Identities=56% Similarity=1.051 Sum_probs=70.3
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
|||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|..+++|+++++...+.|+|++||++||.+|++||.+
T Consensus 63 egG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL~sI~sll~~ 142 (172)
T 2awf_A 63 EGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLAD 142 (172)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCBBCCGGGSCC---------CTTSCCTTCCHHHHHHHHHHHHSC
T ss_pred CCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCCcEehhhcCCcccccccccccCCCCCCcCcHHHHHHHHHHHHHC
Confidence 69999999999999999999999999999999999999999999987788888888888999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHH-HHHHHHHHH
Q psy10005 81 PNDESGANVDAAKMWREDRE-EFNKRANKL 109 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~-~f~~~~~~~ 109 (117)
|++++|+|.+||++|++|++ +|+++||++
T Consensus 143 Pn~~~p~n~~aa~~~~~d~~~~f~~~vr~~ 172 (172)
T 2awf_A 143 PNGDSPANVDAAKEWREDRNGEFKRKVARC 172 (172)
T ss_dssp C-----------------------------
T ss_pred cCCCCccCHHHHHHHHHCcHHHHHHHHHhC
Confidence 99999999999999999999 999999975
No 28
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=8.4e-38 Score=227.03 Aligned_cols=103 Identities=33% Similarity=0.649 Sum_probs=100.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|++||.+||.+|++||.
T Consensus 48 egG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~-------------~WsP~~ti~~VL~sI~sLL~ 114 (215)
T 1tte_A 48 EGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILRN-------------AWSPVITLKSALISLQALLQ 114 (215)
T ss_dssp EEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSCCCSSTTTC-------------CSCTTCCHHHHHHHHHHHHT
T ss_pred CCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCEEECccCCC-------------CCCCcCcHHHHHHHHHHHHh
Confidence 58999999999999999999999999999999999 99999999985 89999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
+|++++|+|.+||++|++|++.|.++||+|+++||..
T Consensus 115 ~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~yA~~ 151 (215)
T 1tte_A 115 SPEPNDPQDAEVAQHYLRDRESFNKTAALWTRLYASE 151 (215)
T ss_dssp SCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHSSCC
T ss_pred CCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999964
No 29
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=9.5e-38 Score=226.88 Aligned_cols=103 Identities=30% Similarity=0.657 Sum_probs=99.8
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+. +|.||+++|.. .|+|++||.+||.+|++||.
T Consensus 68 egG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~-------------~WsP~~ti~~VL~sI~sLL~ 134 (216)
T 2pwq_A 68 EGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGAICLDVLKN-------------EWSPALTIRTALLSIQALLS 134 (216)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCHHHHH-------------HCCTTCCHHHHHHHHHHHHH
T ss_pred cceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCEEEchhhcc-------------cCCCCCcHHHHHHHHHHHHh
Confidence 69999999999999999999999999999999995 99999999985 89999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
+|++++|+|.+||++|++|+++|.++||+|+++||..
T Consensus 135 ~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~~ya~~ 171 (216)
T 2pwq_A 135 DPQPDDPQDAEVAKMYKENHALFVKTASVWTKTFATG 171 (216)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999974
No 30
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-37 Score=215.88 Aligned_cols=103 Identities=26% Similarity=0.578 Sum_probs=99.2
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHH-HHHhh
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLS-VVSML 78 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~-i~~ll 78 (117)
+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|+++|++||.+ |++||
T Consensus 44 egg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~iCl~il~~-------------~W~p~~~i~~vl~~ii~~Ll 110 (152)
T 2onu_A 44 EGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGSVCLDVINQ-------------TWTPLYSLVNVFEVFLPQLL 110 (152)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCBBCHHHHHH-------------HCCTTCCHHHHHHTHHHHHH
T ss_pred cceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCeEecccccc-------------cCCCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999995 99999999975 89999999999999 68999
Q ss_pred cCCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 79 AEPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 79 ~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
.+|++++|+|.+||++|++|+++|+++||+|+++||..
T Consensus 111 ~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~~~~a~~ 148 (152)
T 2onu_A 111 TYPNPSDPLNSDAASLLMKDKNIYEEKVKEYVKLYASK 148 (152)
T ss_dssp HSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHHHHSCG
T ss_pred hCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999974
No 31
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=222.33 Aligned_cols=103 Identities=28% Similarity=0.573 Sum_probs=100.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHH-HHHhh
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLS-VVSML 78 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~-i~~ll 78 (117)
+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|+++|++||.+ |++||
T Consensus 66 egG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ICL~iL~~-------------~WsP~~ti~~iL~s~I~~Ll 132 (179)
T 2z5d_A 66 EGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQ-------------TWTALYDLTNIFESFLPQLL 132 (179)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHH-------------HCCTTCCTTHHHHTHHHHHH
T ss_pred cCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCeEecccccc-------------CCCCCCCHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999 99999999975 89999999999999 99999
Q ss_pred cCCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 79 AEPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 79 ~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
.+|++++|+|.+||++|++|+++|+++||+|+++||..
T Consensus 133 ~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~~~~a~~ 170 (179)
T 2z5d_A 133 AYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATE 170 (179)
T ss_dssp HSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHHHSSH
T ss_pred hCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHHHccc
Confidence 99999999999999999999999999999999999974
No 32
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.9e-37 Score=218.84 Aligned_cols=102 Identities=33% Similarity=0.630 Sum_probs=98.5
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+.+|.||+++|.. .|+|+++|++||.+|++||.+
T Consensus 75 egG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ICL~iL~~-------------~WsP~~ti~~vL~sI~sll~~ 141 (179)
T 1i7k_A 75 EDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNISLDILKE-------------KWSALYDVRTILLSIQSLLGE 141 (179)
T ss_dssp BTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCeEEcccCcC-------------cCCCCCCHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++| +|+++|.++|+++++|+++.
T Consensus 142 Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~~~~~ 176 (179)
T 1i7k_A 142 PNIDSPLNTHAAELW-KNPTAFKKYLQETYSKQVTS 176 (179)
T ss_dssp CCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHTTCC-
T ss_pred CCCcchhhHHHHHHh-hCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999 99999999999999999863
No 33
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=1.1e-36 Score=225.74 Aligned_cols=103 Identities=25% Similarity=0.581 Sum_probs=99.8
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+|+|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|++||++||.+|++||.
T Consensus 105 egG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~-------------~WsP~~ti~~vL~sI~~ll~ 171 (253)
T 3e46_A 105 EGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKD-------------QWAAAMTLRTVLLSLQALLA 171 (253)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTT-------------CCCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccC-------------CCCCCCCHHHHHHHHHHHhc
Confidence 69999999999999999999999999999999995 99999999975 89999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
+|++++|+|.+||++|++|+++|.++||+|+++||+.
T Consensus 172 ~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t~~yA~~ 208 (253)
T 3e46_A 172 AAEPDDPQDAVVANQYKQNPEMFKQTARLWAHVYAGA 208 (253)
T ss_dssp SCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCChhhHHHHHHHHHCHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999963
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-36 Score=210.91 Aligned_cols=99 Identities=28% Similarity=0.574 Sum_probs=96.4
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 49 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~iCl~iL~~-------------~W~p~~~i~~vL~~i~~ll~~ 115 (160)
T 1y8x_A 49 KSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILRE-------------DWKPVLTINSIIYGLQYLFLE 115 (160)
T ss_dssp TTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCeEEcccchh-------------hccCCCCHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHH
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRK 112 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k 112 (117)
|++++|+|.+||++|++|+++|+++||++++.
T Consensus 116 Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v~~ 147 (160)
T 1y8x_A 116 PNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 147 (160)
T ss_dssp CCCSSCSCHHHHHHHHSCHHHHHHHHHHHHHS
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999874
No 35
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=2.9e-36 Score=212.42 Aligned_cols=103 Identities=27% Similarity=0.518 Sum_probs=98.7
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEec-cccccccc-CCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhh
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTC-EMFHPNIY-ADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSML 78 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t-~i~HpnV~-~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll 78 (117)
+||+|+|+|.||++||++||+|+|.| +||||||+ .+|.||+++|.. ++|+|++||++||.+|++||
T Consensus 63 egg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~iCl~iL~~------------~~W~p~~~i~~vL~si~~ll 130 (172)
T 2y9m_A 63 ENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEICLNILKP------------EEWTPVWDLLHCVHAVWRLL 130 (172)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTEECCGGGST------------TTCCTTCCHHHHHHHHHHHH
T ss_pred cCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCEEeccccCC------------CCCCCcCcHHHHHHHHHHHH
Confidence 69999999999999999999999999 99999995 799999999973 38999999999999999999
Q ss_pred cCCCCCCCccHHHHHHHHH-CHHHHHHHHHHHHHHHhc
Q psy10005 79 AEPNDESGANVDAAKMWRE-DREEFNKRANKLVRKTLG 115 (117)
Q Consensus 79 ~~p~~~~~~n~~a~~~~~~-~~~~f~~~~~~~~~k~a~ 115 (117)
.+|++++|+|.+||++|++ |+++|+++||+|+++++.
T Consensus 131 ~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~~~~~~~~ 168 (172)
T 2y9m_A 131 REPVCDSPLDVDIGNIIRCGDMSAYQGIVKYFLAERER 168 (172)
T ss_dssp HSCCTTSCSSHHHHHHHTTTCHHHHHHHHHHHHHHHHC
T ss_pred hCCCCCCccCHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 999999999999999874
No 36
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=6.7e-37 Score=215.56 Aligned_cols=103 Identities=29% Similarity=0.545 Sum_probs=99.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccC-CCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHH-HHhh
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYA-DGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSV-VSML 78 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~-~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i-~~ll 78 (117)
+||+|+++|.||++||++||+|+|.|+||||||+. +|.||+++|.. +|+|+++|++||.+| ++||
T Consensus 53 egg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~iCl~iL~~-------------~W~p~~~i~~vL~sil~~ll 119 (171)
T 1yf9_A 53 EDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGSVCLDVINQ-------------TWTPMYQLENIFDVFLPQLL 119 (171)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCBBCHHHHHH-------------HCCTTCCTHHHHHTHHHHHH
T ss_pred cCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCeEecccccc-------------CCCCCCcHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999995 99999999985 899999999999997 7999
Q ss_pred cCCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 79 AEPNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 79 ~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
.+|+.++|+|.+||++|++|+++|.++||+|+++||..
T Consensus 120 ~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~~~~a~~ 157 (171)
T 1yf9_A 120 RYPNPSDPLNVQAAHLLHADRVGFDALLREHVSTHATP 157 (171)
T ss_dssp HSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHHHHHCCH
T ss_pred hCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHHHHcCh
Confidence 99999999999999999999999999999999999863
No 37
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=1.9e-36 Score=216.41 Aligned_cols=100 Identities=31% Similarity=0.553 Sum_probs=97.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 78 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G~iCl~iL~~-------------~W~p~~~i~~vL~~i~~ll~~ 144 (190)
T 3o2u_A 78 NYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILRE-------------DWSPALDLQSIITGLLFLFLE 144 (190)
T ss_dssp TTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTSBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCCeEechhccC-------------CCCCCCCHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHH
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKT 113 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~ 113 (117)
|++++|+|.+||++|++|+++|+++||+|++.+
T Consensus 145 pn~~~pln~~aa~~~~~d~~~f~~~ar~~~~~~ 177 (190)
T 3o2u_A 145 PNPNDPLNKDAAKLLCEGEKEFAEAVRLTMSGG 177 (190)
T ss_dssp CCTTSCSSHHHHHHHHTCHHHHHHHHHHHHBTC
T ss_pred CCCCcchhHHHHHHHHHCHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999764
No 38
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.9e-36 Score=211.88 Aligned_cols=99 Identities=27% Similarity=0.537 Sum_probs=96.5
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++||++||.+|++||.+
T Consensus 69 egg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~iCl~iL~~-------------~W~p~~~i~~vL~si~~ll~~ 135 (180)
T 2nvu_C 69 KSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVALNILRE-------------DWKPVLTINSIIYGLQYLFLE 135 (180)
T ss_dssp TTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSBBCCGGGTT-------------SCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCcEEcccccc-------------cCCCCCCHHHHHHHHHHHHhC
Confidence 6999999999999999999999999999999999999999999985 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHH
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRK 112 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k 112 (117)
|++++|+|.+||++|++|+++|+++||++++.
T Consensus 136 Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~~ 167 (180)
T 2nvu_C 136 PNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRG 167 (180)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHS
T ss_pred CCCCCccCHHHHHHHHHCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999875
No 39
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.5e-36 Score=210.17 Aligned_cols=100 Identities=29% Similarity=0.579 Sum_probs=93.8
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccc-cCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNI-YADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV-~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||+|+|+|.||++||++||+|+|.|+|||||| +.+|.||+++|... ++|+|++||++||.+|++||.
T Consensus 68 egG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~-----------~~WsP~~ti~~vL~sI~sll~ 136 (169)
T 1yrv_A 68 QGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNP-----------EKWNTNYTLSSILLALQVMLS 136 (169)
T ss_dssp TTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCCBCCHHHHCG-----------GGCCTTCCHHHHHHHHHHHHT
T ss_pred cceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCeEeehhhcCC-----------cCCCCcCCHHHHHHHHHHHHh
Confidence 699999999999999999999999999999999 78999999999721 289999999999999999999
Q ss_pred CCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHH
Q psy10005 80 EPNDESGANVDAAKMWREDREEFNKRANKLVRK 112 (117)
Q Consensus 80 ~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k 112 (117)
+|++++|+|.+||++|++|+++|+++ |+++++
T Consensus 137 ~Pn~~~Pln~eaa~l~~~d~~~y~~~-~~~v~~ 168 (169)
T 1yrv_A 137 NPVLENPVNLEAARILVKDESLYRTI-LRLFNR 168 (169)
T ss_dssp SCCTTSCSCHHHHHHHHSCHHHHHHH-HHHHC-
T ss_pred CCCCCCchhHHHHHHHHHCHHHHHHH-HHHhhC
Confidence 99999999999999999999999998 888765
No 40
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=1.3e-34 Score=226.14 Aligned_cols=103 Identities=34% Similarity=0.718 Sum_probs=100.4
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|++|+++||.+|++||.+
T Consensus 48 egg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~-------------~W~p~~~i~~vL~~i~~ll~~ 114 (399)
T 4ddg_A 48 QGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSISLDILRS-------------QWSPALTISKVLLSICSLLCD 114 (399)
T ss_dssp TTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTCBBCCGGGTT-------------SCCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEECCcccCCCCcEEEeeccccccccCCCCeEeCccccc-------------CCCccccHHHHHHHHHHHHcC
Confidence 6999999999999999999999999999999999999999999975 899999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhcc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLGL 116 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~~ 116 (117)
|++++|+|.+||++|++|+++|.++||+|+++||..
T Consensus 115 pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~~~a~~ 150 (399)
T 4ddg_A 115 PNPDDPLVPEIARIYKTDREKYNRIAREWTQKYAMG 150 (399)
T ss_dssp CCTTSCSSHHHHHHHHHCHHHHHHHHHHHHHHHTSC
T ss_pred CCCCchhhHHHHHHHHHCHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999974
No 41
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.98 E-value=1.3e-32 Score=192.81 Aligned_cols=95 Identities=19% Similarity=0.488 Sum_probs=88.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHH-HHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILL-SVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~-~i~~ll~ 79 (117)
+||.|+++|.||++||++||+|+|.|+||||||+.+|.||+++|.. +|+|+++++++|+ .|++|+.
T Consensus 67 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~il~~-------------~W~p~~~i~~vll~~l~~l~~ 133 (167)
T 4ds2_A 67 AGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEGGICDRMVND-------------FWTPDQHASDVIKLVLDRVFS 133 (167)
T ss_dssp TCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTSCCCTHHHHT-------------TCCTTSCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCCEEEcccCcC-------------CCCCCCChHHHHHHHHHHHHh
Confidence 3999999999999999999999999999999999999999999975 8999999999755 5777776
Q ss_pred C--CCCCCCccHHHHHHHHHCHHHHHHHHHH
Q psy10005 80 E--PNDESGANVDAAKMWREDREEFNKRANK 108 (117)
Q Consensus 80 ~--p~~~~~~n~~a~~~~~~~~~~f~~~~~~ 108 (117)
. |++++|+|.+||++|++|+++|+++||+
T Consensus 134 ~~~pn~~~p~n~eaa~l~~~d~~~f~~~vrr 164 (167)
T 4ds2_A 134 QYKSRRDDDVNPEARHYLEKFPQDFAARVRR 164 (167)
T ss_dssp STTSCCSCCCCHHHHHHHHHCHHHHHHHHTT
T ss_pred cCCCCCcchHhHHHHHHHHHCHHHHHHHHhh
Confidence 4 8999999999999999999999999983
No 42
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.97 E-value=9.8e-32 Score=204.56 Aligned_cols=109 Identities=29% Similarity=0.501 Sum_probs=99.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecc-----cccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcc-cHHHHHHHH
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCE-----MFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQ-SVEKILLSV 74 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~-----i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~-t~~~il~~i 74 (117)
+||+|+|+|.||++||++||+|+|.|+ ||||||+.+|.|||++|..|. +...+.|+|++ ||.+||.+|
T Consensus 125 egG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G~ICLsiL~~~~------g~~~e~WsPa~stI~~VLlsI 198 (323)
T 3ceg_A 125 ANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDGKVCLSILNTWH------GRPEEKWNPQTSSFLQVLVSV 198 (323)
T ss_dssp BTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTCBBCCGGGTSSC------CCGGGSCCTTTCCHHHHHHHH
T ss_pred CCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCCeEechhhcccc------CCCcCCCCcCcCCHHHHHHHH
Confidence 689999999999999999999999998 999999999999999998642 23345899999 899999999
Q ss_pred HHhhc--CCCCCCCccHHH--HHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 75 VSMLA--EPNDESGANVDA--AKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 75 ~~ll~--~p~~~~~~n~~a--~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
++||. +|++++|+|.++ +.+|.+|++.|+++||+|++|||.
T Consensus 199 qsLL~~~~Pn~~dP~~~~a~a~~~~~~d~~~Y~~~vr~~t~k~A~ 243 (323)
T 3ceg_A 199 QSLILVAEPYFNEPGYERSRGTPSGTQSSREYDGNIRQATVKWAM 243 (323)
T ss_dssp HHHTSCSSGGGGSTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCCCCCCCccCHHHHHhhhhhhhHHHHHHHHHHHHHHHhh
Confidence 99996 688899999976 589999999999999999999985
No 43
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.96 E-value=2.2e-31 Score=184.93 Aligned_cols=84 Identities=20% Similarity=0.407 Sum_probs=78.5
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcE---EecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHh
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRV---CISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSM 77 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~v---cl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~l 77 (117)
|||+|+++|.||++||++||+|+|.|+||||||+.+|.| |+++|+ +|+|++||++||.+|++|
T Consensus 70 egG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~icisCL~iL~--------------~WsP~~ti~~vL~sI~~l 135 (156)
T 2q0v_A 70 ENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCGRVIKNNLHILK--------------NWNRNYTIETILISLRQE 135 (156)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTSBBCGGGSHHHH--------------TCCTTCCHHHHHHHHHHH
T ss_pred CCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCCeEehhhccccc--------------CCCCcCcHHHHHHHHHHH
Confidence 699999999999999999999999999999999999999 888886 699999999999999999
Q ss_pred hcCCCCCCCccHHHHHHHHHC
Q psy10005 78 LAEPNDESGANVDAAKMWRED 98 (117)
Q Consensus 78 l~~p~~~~~~n~~a~~~~~~~ 98 (117)
|.+|+.++++|++||++|++|
T Consensus 136 l~~Pn~~~p~n~~aa~~y~~n 156 (156)
T 2q0v_A 136 MLSSANKRLPQPNEGEVYSNN 156 (156)
T ss_dssp TTSTTTTTCCCCCTTCBC---
T ss_pred HhCCCCCCcCChHHHHHhhhC
Confidence 999999999999999998765
No 44
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.95 E-value=1.8e-30 Score=176.95 Aligned_cols=81 Identities=22% Similarity=0.436 Sum_probs=76.6
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCC-CcE--EecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHh
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYAD-GRV--CISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSM 77 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~-G~v--cl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~l 77 (117)
+||+|+++|.||++||++||+|+|.|+||||||+.+ |.| |+++|+ +|+|++|+++||.+|++|
T Consensus 55 egg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~i~~cL~~l~--------------~W~p~~~i~~vl~~i~~l 120 (138)
T 1jat_B 55 ENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLR--------------DWKRAYTMETLLLDLRKE 120 (138)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCTTSHHHH--------------TCCTTCCHHHHHHHHHHH
T ss_pred cceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCEEeeecccCC--------------CCCCcCcHHHHHHHHHHH
Confidence 699999999999999999999999999999999985 999 899886 799999999999999999
Q ss_pred hcCCCCCCCccHHHHHHH
Q psy10005 78 LAEPNDESGANVDAAKMW 95 (117)
Q Consensus 78 l~~p~~~~~~n~~a~~~~ 95 (117)
|.+|+.++++|++|+.+|
T Consensus 121 l~~pn~~~p~~~~~~~~y 138 (138)
T 1jat_B 121 MATPANKKLRQPKEGETF 138 (138)
T ss_dssp HTSHHHHTSCCCCTTCBC
T ss_pred HcCCCCCCCCCcchhhcC
Confidence 999999999999988654
No 45
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.95 E-value=2.6e-29 Score=175.11 Aligned_cols=81 Identities=16% Similarity=0.307 Sum_probs=75.2
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEeccccccccc-CCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIY-ADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
|||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|..+ ++|+|++||++||.+|++||.
T Consensus 74 egG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~-----------~~WsP~~ti~~vL~sI~~ll~ 142 (160)
T 2a4d_A 74 ENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-----------AKWQNSYSIKVVLQELRRLMM 142 (160)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCBBCGGGSHHH-----------HTCCTTCCHHHHHHHHHHHHT
T ss_pred cCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCEEehhhcCCc-----------cCCCccCcHHHHHHHHHHHHc
Confidence 6999999999999999999999999999999999 5999999998721 289999999999999999995
Q ss_pred -CCCCCCCccHHHH
Q psy10005 80 -EPNDESGANVDAA 92 (117)
Q Consensus 80 -~p~~~~~~n~~a~ 92 (117)
+|+.++|+|.|||
T Consensus 143 ~~pn~~~P~n~eaa 156 (160)
T 2a4d_A 143 SKENMKLPQPPEGQ 156 (160)
T ss_dssp STTTTTCCCCCTTC
T ss_pred cCCCCCCCCChhhc
Confidence 6999999999987
No 46
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.95 E-value=5.7e-29 Score=174.93 Aligned_cols=81 Identities=16% Similarity=0.307 Sum_probs=75.0
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEeccccccccc-CCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIY-ADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~-~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
|||+|+++|.||++||++||+|+|.|+||||||+ .+|.||+++|..+ +.|+|++||++||.+|++||.
T Consensus 84 egG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ICl~iL~~~-----------~~WsP~~ti~~vL~sI~~ll~ 152 (170)
T 2hlw_A 84 ENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVL-----------AKWQNSYSIKVVLQELRRLMM 152 (170)
T ss_dssp SSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCBBCTTTCHHH-----------HTCCSSCCHHHHHHHHHHHHH
T ss_pred CCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCEEEhhhcCCC-----------CCCCccCcHHHHHHHHHHHHc
Confidence 6999999999999999999999999999999999 6999999998621 289999999999999999997
Q ss_pred -CCCCCCCccHHHH
Q psy10005 80 -EPNDESGANVDAA 92 (117)
Q Consensus 80 -~p~~~~~~n~~a~ 92 (117)
.|+.++|+|.|||
T Consensus 153 ~~pn~~~P~n~eaa 166 (170)
T 2hlw_A 153 SKENMKLPQPPEGQ 166 (170)
T ss_dssp STTTSSSCCCSSCC
T ss_pred cCCCCCCCCCcccc
Confidence 5999999999887
No 47
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.95 E-value=5.9e-28 Score=162.09 Aligned_cols=72 Identities=32% Similarity=0.732 Sum_probs=64.1
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEeccc-ccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEM-FHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
|||.|+++|.||++||++||+|+|.|+| |||||+.+|.||+++|.. +|+|++|+++||.+|++||.
T Consensus 51 egg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~iCl~iL~~-------------~W~P~~~i~~vl~si~~ll~ 117 (125)
T 2fo3_A 51 ANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNGDICLSLLGD-------------DYNPSLSISGLVLSIISMLS 117 (125)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTSBBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHC
T ss_pred CCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCCEEEchhcCC-------------CCCCCCcHHHHHHHHHHHHh
Confidence 6999999999999999999999999996 999999999999999975 89999999999999999999
Q ss_pred CCCCCC
Q psy10005 80 EPNDES 85 (117)
Q Consensus 80 ~p~~~~ 85 (117)
+|+...
T Consensus 118 ~p~~~~ 123 (125)
T 2fo3_A 118 SAKEKK 123 (125)
T ss_dssp ------
T ss_pred Cccccc
Confidence 988653
No 48
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.94 E-value=2.3e-27 Score=161.30 Aligned_cols=70 Identities=31% Similarity=0.743 Sum_probs=67.0
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEeccc-ccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhc
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEM-FHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLA 79 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~ 79 (117)
+||.|+++|.||++||++||+|+|.|+| |||||+.+|.||+++|.. +|+|++|+++||.+|++||.
T Consensus 65 egg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ICl~iL~~-------------~WsP~~ti~~vL~si~sll~ 131 (136)
T 2h2y_A 65 ANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGDICLSVLGD-------------DYNPSLSISGLILSIISMLS 131 (136)
T ss_dssp TTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCCBCCGGGTT-------------TCCTTCCHHHHHHHHHHHHS
T ss_pred eCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCEEECccccC-------------CCCCCCcHHHHHHHHHHHHh
Confidence 6999999999999999999999999996 999999999999999975 89999999999999999999
Q ss_pred CCCC
Q psy10005 80 EPND 83 (117)
Q Consensus 80 ~p~~ 83 (117)
+|+.
T Consensus 132 ~p~~ 135 (136)
T 2h2y_A 132 SAKE 135 (136)
T ss_dssp SSCC
T ss_pred CcCc
Confidence 9874
No 49
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.94 E-value=4.9e-28 Score=172.28 Aligned_cols=92 Identities=14% Similarity=0.445 Sum_probs=79.5
Q ss_pred CEEEEEEEcCCCCCCCCCeEEEecccccc-cccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcCC
Q psy10005 3 TITPAKVTFPSDYPLSPPKMQFTCEMFHP-NIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAEP 81 (117)
Q Consensus 3 g~f~~~i~fp~~YP~~pP~v~f~t~i~Hp-nV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~p 81 (117)
|.|+|+|.||++||++||+|+|.|++||| ||+.+|.||+++|.. ++|+|++||++||.+|++||.+|
T Consensus 89 g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~------------~~WsP~~ti~~VL~sI~slL~~p 156 (186)
T 1zuo_A 89 EYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGGALCMELLTK------------QGWSSAYSIESVIMQINATLVKG 156 (186)
T ss_dssp CSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGGBBCCGGGST------------TTCCTTSCHHHHHHHHHHHHHHT
T ss_pred eEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCCcEEeccCCC------------CCCCCcCcHHHHHHHHHHHHcCC
Confidence 89999999999999999999999999999 699999999999974 38999999999999999999988
Q ss_pred CCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHh
Q psy10005 82 NDESGANVDAAKMWREDREEFNKRANKLVRKTL 114 (117)
Q Consensus 82 ~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a 114 (117)
+.+. .|..++.+|.+.+++++.+++
T Consensus 157 ~a~~--------~~~~~~~~Y~~~~~~~~~~~~ 181 (186)
T 1zuo_A 157 KARV--------QFGANKNQYNLARAQQSYNSI 181 (186)
T ss_dssp TCEE--------CTTCCTTCCCHHHHHHHHHHH
T ss_pred ChhH--------hhccCHHHHhHHHHHHHHHHH
Confidence 6543 334456677777777776654
No 50
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.93 E-value=2.4e-26 Score=156.41 Aligned_cols=66 Identities=39% Similarity=0.789 Sum_probs=63.4
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccc--cccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhh
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMF--HPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSML 78 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~--HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll 78 (117)
|||.|+++|.||++||++||+|+|.|+|| ||||+.+|.||+++|.+ +|+|++||++||.+|++||
T Consensus 69 egG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G~ICL~iL~~-------------~WsP~~ti~~vL~sI~slL 135 (136)
T 2a7l_A 69 EGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNGHICLSILTE-------------DWSPALSVQSVCLSIISML 135 (136)
T ss_dssp TTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTCBBCCGGGTT-------------TCCTTSCHHHHHHHHHHHT
T ss_pred ccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCCeEEchhcCC-------------CCCCCCcHHHHHHHHHHHh
Confidence 69999999999999999999999999999 99999999999999985 8999999999999999997
Q ss_pred c
Q psy10005 79 A 79 (117)
Q Consensus 79 ~ 79 (117)
.
T Consensus 136 ~ 136 (136)
T 2a7l_A 136 S 136 (136)
T ss_dssp C
T ss_pred C
Confidence 4
No 51
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.91 E-value=2.4e-24 Score=153.38 Aligned_cols=93 Identities=23% Similarity=0.443 Sum_probs=68.9
Q ss_pred CCCEEEEEEEcCCCCCCCCCeEEEecccccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 1 MDTITPAKVTFPSDYPLSPPKMQFTCEMFHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
+||+|+++|.||++||++||+|+|.|+ ||||+.+|.|||++|..+. +.|+|+++|.+||.+|++||.+
T Consensus 59 egG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G~ICL~iL~~~~----------~~W~P~~ti~~vL~si~sll~~ 126 (187)
T 2f4w_A 59 EGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNTRLCLSITDFHP----------DTWNPAWSVSTILTGLLSFMVE 126 (187)
T ss_dssp TTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTSCBC--------------------CCTTCCHHHHHHHHHHHHHS
T ss_pred CCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCCeEeeeccccCc----------cCCCCcCcHHHHHHHHHHHhcC
Confidence 699999999999999999999999999 9999999999999995211 3899999999999999999999
Q ss_pred CCCCCCc---cHHHHHHHHHCHHHHHHH
Q psy10005 81 PNDESGA---NVDAAKMWREDREEFNKR 105 (117)
Q Consensus 81 p~~~~~~---n~~a~~~~~~~~~~f~~~ 105 (117)
|+++... .....+.|..+...|+.+
T Consensus 127 p~p~~g~~~~~~~~r~~~a~~s~~~~~~ 154 (187)
T 2f4w_A 127 KGPTLGSIETSDFTKRQLAVQSLAFNLK 154 (187)
T ss_dssp CCCCTTBCCCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcccccChHHHHHHHHHHHHHhhc
Confidence 8876431 233444555444444443
No 52
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.74 E-value=3.4e-18 Score=119.00 Aligned_cols=71 Identities=25% Similarity=0.532 Sum_probs=63.9
Q ss_pred CCCE---EEEEEEcCCCCCCCCCeEEEec-------c---cc-cccccCCCcEEecCCCCCCCCCCCCCCCCCCCCC-cc
Q psy10005 1 MDTI---TPAKVTFPSDYPLSPPKMQFTC-------E---MF-HPNIYADGRVCISILHAPGDDPMGYESSSERWSP-VQ 65 (117)
Q Consensus 1 ~gg~---f~~~i~fp~~YP~~pP~v~f~t-------~---i~-HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p-~~ 65 (117)
+||+ |.+.|.||++||++||.|.|.+ + |+ ||||+.+|+||+++|. +|+| +.
T Consensus 76 ~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~lpyL~--------------~W~p~~s 141 (162)
T 3r3q_A 76 DGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIALPILH--------------AWDPAAM 141 (162)
T ss_dssp CTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBCCGGGG--------------SCCGGGC
T ss_pred cCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEeCcccc--------------cCCCCcC
Confidence 4677 8899999999999999998865 1 77 9999999999999996 6999 57
Q ss_pred cHHHHHHHHHHhhcCCCCCC
Q psy10005 66 SVEKILLSVVSMLAEPNDES 85 (117)
Q Consensus 66 t~~~il~~i~~ll~~p~~~~ 85 (117)
++.++|.+|+++|.+|+++.
T Consensus 142 ~L~~ll~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 142 NLIMVVQELMSLLHEPPQDQ 161 (162)
T ss_dssp CHHHHHHHHHHTTSCCCCCC
T ss_pred cHHHHHHHHHHHhcCCCCCC
Confidence 89999999999999999875
No 53
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.71 E-value=1.1e-18 Score=121.36 Aligned_cols=74 Identities=14% Similarity=0.234 Sum_probs=59.0
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecc-cccccccCCCcEEecCCCC--CCCCCCCCCCCCCCCCCcccHHHHHHHHHHhhcC
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFTCE-MFHPNIYADGRVCISILHA--PGDDPMGYESSSERWSPVQSVEKILLSVVSMLAE 80 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~t~-i~HpnV~~~G~vcl~~l~~--~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll~~ 80 (117)
.|+++|.||++||.+||+|+|.++ +||||||.+|+|||++|.. | ..|+|.++|..+|.-
T Consensus 84 ~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~W-----------s~~~P~~~IahiL~l------- 145 (172)
T 2z6o_A 84 EFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLW-----------ARNVPKFGLAHLMAL------- 145 (172)
T ss_dssp EEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHH-----------HHHTTSCCHHHHHHH-------
T ss_pred EEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccc-----------cccCCccCHHHHHhh-------
Confidence 999999999999999999999998 9999999999999999943 1 145599999999842
Q ss_pred CCCCCCccHHHHHHHH
Q psy10005 81 PNDESGANVDAAKMWR 96 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~ 96 (117)
....++..|+..+..
T Consensus 146 -gl~pwla~eip~lv~ 160 (172)
T 2z6o_A 146 -GLGPWLAVEIPDLIQ 160 (172)
T ss_dssp -THHHHHHHHHHHHHH
T ss_pred -ccCchhhhhhHHHHH
Confidence 233444555555443
No 54
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.44 E-value=1.2e-13 Score=94.56 Aligned_cols=64 Identities=16% Similarity=0.361 Sum_probs=56.4
Q ss_pred CCCEEE--EEEEcCCCCCCCCCeEEEecc------cccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCC-cccHHHHH
Q psy10005 1 MDTITP--AKVTFPSDYPLSPPKMQFTCE------MFHPNIYADGRVCISILHAPGDDPMGYESSSERWSP-VQSVEKIL 71 (117)
Q Consensus 1 ~gg~f~--~~i~fp~~YP~~pP~v~f~t~------i~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p-~~t~~~il 71 (117)
.|++|. +.|.||++||++||.| |.++ ..||||+.+|+||++.|. +|++ ..++.+++
T Consensus 65 ~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~--------------~W~~~~snL~~ll 129 (146)
T 3obq_A 65 RGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLH--------------EWKHPQSDLLGLI 129 (146)
T ss_dssp SSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHH--------------TCCTTTCCHHHHH
T ss_pred cCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEeccccc--------------ccCCCCCCHHHHH
Confidence 367777 5999999999999999 7766 589999999999999997 5877 77899999
Q ss_pred HHHHHhhc
Q psy10005 72 LSVVSMLA 79 (117)
Q Consensus 72 ~~i~~ll~ 79 (117)
..++++|.
T Consensus 130 ~~l~~~F~ 137 (146)
T 3obq_A 130 QVMIVVFG 137 (146)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999885
No 55
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.31 E-value=2.2e-13 Score=93.15 Aligned_cols=41 Identities=20% Similarity=0.484 Sum_probs=38.7
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecc-cccccccCCCcEEecCC
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFTCE-MFHPNIYADGRVCISIL 44 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~t~-i~HpnV~~~G~vcl~~l 44 (117)
.|++++.||.+||.+||+|+|.+. .+|||+|.+|+|||+++
T Consensus 86 eFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIh 127 (168)
T 3kpa_A 86 EFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTH 127 (168)
T ss_dssp EEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTT
T ss_pred EEEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccc
Confidence 799999999999999999999995 89999999999999974
No 56
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=95.01 E-value=0.12 Score=34.68 Aligned_cols=23 Identities=22% Similarity=0.291 Sum_probs=20.2
Q ss_pred EEEEEEEcCCCCCCCCCeEEEec
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFTC 26 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~t 26 (117)
.+.+.|.+|.+||..+|.|...+
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~ 98 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRS 98 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEC
T ss_pred eEEEEEEcCCCCCCCCCcEEEEe
Confidence 68899999999999999997654
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.80 E-value=0.028 Score=36.37 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=19.4
Q ss_pred EEEEEEEcCCCCCCCCCeEEEe
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFT 25 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~ 25 (117)
.+.+.|.||++||..||.+...
T Consensus 56 ~~~L~v~~p~~YP~~~P~i~l~ 77 (128)
T 2ebm_A 56 QTTLKFTYSEKYPDEAPLYEIF 77 (128)
T ss_dssp BEEEEEECCSSTTTSCCEEEEE
T ss_pred eEEEEEEeCCCCCCCCceEEEE
Confidence 5678999999999999998765
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=94.21 E-value=0.053 Score=35.54 Aligned_cols=23 Identities=17% Similarity=0.470 Sum_probs=19.7
Q ss_pred EEEEEEEcCCCCCCCCCeEEEec
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFTC 26 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~t 26 (117)
.+.+.|.+|++||..||.|....
T Consensus 63 ~~~L~~~~p~~YP~~~P~i~l~~ 85 (138)
T 2yz0_A 63 SITLHFAMTPMYPYTAPEIEFKN 85 (138)
T ss_dssp EEEEEEECCSSTTSSCCEEEEEC
T ss_pred EEEEEEECCCCCCCCCCeEEEec
Confidence 46788999999999999998763
No 59
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=94.20 E-value=0.048 Score=35.23 Aligned_cols=23 Identities=17% Similarity=0.434 Sum_probs=20.1
Q ss_pred EEEEEEEcCCCCCCCCCeEEEec
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFTC 26 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~t 26 (117)
.+.+.|.+|++||..+|.|...+
T Consensus 60 ~~~L~~~~p~~YP~~~P~i~~~~ 82 (128)
T 2day_A 60 CFTLVLQVPAEYPHEVPQISIRN 82 (128)
T ss_dssp EEEEEEEECSSTTSSCCEEEEEE
T ss_pred eEEEEEEcCCCCCCCCCCeEEEc
Confidence 56788999999999999998774
No 60
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=93.44 E-value=0.056 Score=35.27 Aligned_cols=22 Identities=23% Similarity=0.496 Sum_probs=19.4
Q ss_pred EEEEEEEcCCCCCCCCCeEEEe
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFT 25 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~ 25 (117)
.+.+.|.||++||..+|.|...
T Consensus 64 ~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 64 QVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp EEEEEECCCTTTTSSCCCCEEE
T ss_pred EEEEEEECCCCCCCCCCcEEEe
Confidence 5778999999999999999774
No 61
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=93.32 E-value=0.27 Score=34.44 Aligned_cols=49 Identities=16% Similarity=0.378 Sum_probs=37.1
Q ss_pred CCEEEEEEEcCCCCCCCCCeEEEeccc-ccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHHHhh
Q psy10005 2 DTITPAKVTFPSDYPLSPPKMQFTCEM-FHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVVSML 78 (117)
Q Consensus 2 gg~f~~~i~fp~~YP~~pP~v~f~t~i-~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~~ll 78 (117)
|....++|.++.+||.+||.+...-+. ++ -.|+|..++.+++...+..+
T Consensus 37 gR~H~l~v~l~~~yp~~~P~~~~DlP~~~~----------------------------~~w~~~ssL~~v~~qF~~~L 86 (186)
T 3zqs_A 37 GREHLITLKLKAKYPAESPDYFVDFPVPFC----------------------------ASWTPQSSLISIYSQFLAAI 86 (186)
T ss_dssp SCEEEEEEECCTTTTTSCCEEECCCSSCCC----------------------------CCCCTTCCHHHHHHHHHHHH
T ss_pred CCeEEEEEEECCCCCCCCCeeEEcCCCCcc----------------------------cccCCCccHHHHHHHHHHHH
Confidence 556678999999999999988555332 11 27999999998888776655
No 62
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.55 E-value=0.1 Score=34.82 Aligned_cols=23 Identities=17% Similarity=0.407 Sum_probs=19.8
Q ss_pred EEEEEEEcCCCCCCCCCeEEEec
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFTC 26 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~t 26 (117)
.+.+.|.+|.+||..||.|....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEEC
T ss_pred eEEEEEECCCCCCCCCCeEEEEc
Confidence 56788999999999999997664
No 63
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.53 E-value=0.059 Score=34.90 Aligned_cols=22 Identities=18% Similarity=0.381 Sum_probs=18.5
Q ss_pred EEEEEEEcCCCCCCCCCeEEEe
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFT 25 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~ 25 (117)
.+.+.|.+|++||..||.|...
T Consensus 57 ~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 57 PLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp EEEEEEEECSSTTSSCCCCCCC
T ss_pred EEEEEEECCCCCCCCCCeEEEE
Confidence 5778899999999999998543
No 64
>2cwb_A Chimera of immunoglobulin G binding protein G and ubiquitin-like protein SB132; helical bundle, protein binding; NMR {Streptococcus SP} PDB: 2den_A
Probab=91.37 E-value=0.036 Score=35.61 Aligned_cols=35 Identities=6% Similarity=-0.053 Sum_probs=0.0
Q ss_pred CCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 81 PNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 81 p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
-....|.++++|++|+++++.|...+|.|+.-+|+
T Consensus 21 ~~~~~PQDA~VA~qy~~~~~~f~~TAr~WT~~~a~ 55 (108)
T 2cwb_A 21 ETTTEAVDAATAEKVFKQYANDNGVDGEWTYDDAT 55 (108)
T ss_dssp -----------------------------------
T ss_pred cccCCchhHHHHHHHHhchhccccccccccccCcC
Confidence 34567999999999999999999999999965553
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=47.13 E-value=21 Score=25.07 Aligned_cols=25 Identities=12% Similarity=0.142 Sum_probs=22.2
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYPL-----SPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~-----~pP~v~f~ 25 (117)
+.|.|.|+-.+|--||. +||.|-|.
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~ 138 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLI 138 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEE
Confidence 46999999999999998 88888776
No 66
>1zoq_C CREB-binding protein, interferon regulatory factor 3; transcription regulation, transferase, transcription/transferase complex; 2.37A {Homo sapiens} SCOP: a.153.1.1 PDB: 1jjs_A
Probab=42.56 E-value=13 Score=19.93 Aligned_cols=43 Identities=12% Similarity=0.181 Sum_probs=31.0
Q ss_pred HHHHHHhhcCCCCCCC-ccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 71 LLSVVSMLAEPNDESG-ANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 71 l~~i~~ll~~p~~~~~-~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
|..|..-|.+|. +| .+-.+-.+.+.|+..-...+++-+.||.+
T Consensus 3 LqqLl~tlksp~--sp~qqqqvl~ILksnPqLMAAfIkQR~~~y~~ 46 (47)
T 1zoq_C 3 LQDLLRTLKSPS--SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 46 (47)
T ss_dssp HHHHHHTCCSCC--CHHHHHHHHHHHHTCHHHHHHHHHHTTTCCCC
T ss_pred HHHHHHHhcCCC--CHHHHHHHHHHHHcCHHHHHHHHHHHHHHhcc
Confidence 444555556665 44 35677888999999999989888887764
No 67
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=32.08 E-value=58 Score=22.44 Aligned_cols=23 Identities=13% Similarity=0.180 Sum_probs=19.5
Q ss_pred EEEEEEcCCCCCCCCCeEEEecc
Q psy10005 5 TPAKVTFPSDYPLSPPKMQFTCE 27 (117)
Q Consensus 5 f~~~i~fp~~YP~~pP~v~f~t~ 27 (117)
-.+.|++.+..|...|.++|..+
T Consensus 126 vsl~i~vdP~~P~~lPe~~FlG~ 148 (186)
T 3zqs_A 126 VSINIEVDPRHPTMLPECFFLGA 148 (186)
T ss_dssp EEEEEECCTTSTTSCCEEEEEEC
T ss_pred cEEEEEECCCCCCcCCceEEECC
Confidence 35778889999999999999964
No 68
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=30.93 E-value=29 Score=24.91 Aligned_cols=25 Identities=20% Similarity=0.437 Sum_probs=22.0
Q ss_pred CCCEEEEEEEcCCCCC-------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP-------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP-------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||.|-|.
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~ 165 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFS 165 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEE
Confidence 4799999999999998 489998876
No 69
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=28.21 E-value=34 Score=25.53 Aligned_cols=25 Identities=20% Similarity=0.339 Sum_probs=21.4
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP------------------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||-|-|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 4799999999999998 578888776
No 70
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=27.24 E-value=37 Score=24.35 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=22.1
Q ss_pred CCCEEEEEEEcCCCCCC-------CCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYPL-------SPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP~-------~pP~v~f~ 25 (117)
+.|.|.|+-.+|--||. +||-|-|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 46999999999999986 78988877
No 71
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=27.21 E-value=37 Score=25.13 Aligned_cols=25 Identities=20% Similarity=0.331 Sum_probs=21.6
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP------------------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||-|-|.
T Consensus 183 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 183 PDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 4799999999999998 568888776
No 72
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=27.12 E-value=37 Score=25.07 Aligned_cols=25 Identities=28% Similarity=0.514 Sum_probs=21.6
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP------------------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||-|-|.
T Consensus 180 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 180 NDGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 4699999999999999 468888776
No 73
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=26.62 E-value=38 Score=25.28 Aligned_cols=25 Identities=24% Similarity=0.397 Sum_probs=21.7
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP------------------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||-|-|.
T Consensus 183 ~~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 183 AEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TTCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 4799999999999998 568988886
No 74
>1kbh_B CREB-binding protein, nuclear receptor coactivator; nuclear hormone receptors, ACTR, CBP, transcription; NMR {Mus musculus} SCOP: a.153.1.1 PDB: 2c52_A 2kkj_A 2l14_A
Probab=26.40 E-value=90 Score=17.36 Aligned_cols=45 Identities=9% Similarity=0.160 Sum_probs=32.1
Q ss_pred HHHHHHHhhcCCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHhc
Q psy10005 70 ILLSVVSMLAEPNDESGANVDAAKMWREDREEFNKRANKLVRKTLG 115 (117)
Q Consensus 70 il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a~ 115 (117)
.|..|..-|.+|. ..-.+-.+-.+.+.|+..-...+|+-+.+|.+
T Consensus 9 aLqqLl~tlksp~-speqqqqvl~ILksNPqLMAAfIKQR~~~~~~ 53 (59)
T 1kbh_B 9 ALQDLLRTLKSPS-SPQQQQQVLNILKSNPQLMAAFIKQRTAKYVA 53 (59)
T ss_dssp HHHHHHHHHHSCT-TTTCSTHHHHHHTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCC-CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhc
Confidence 3444444555666 23346788889999999998889888888865
No 75
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=26.13 E-value=87 Score=22.42 Aligned_cols=49 Identities=12% Similarity=0.161 Sum_probs=34.1
Q ss_pred CCCCcccHHHHHHHHHHhhcCCCCCCCccHHHHHHHHHCHHHHHHHHHHHHHHHh
Q psy10005 60 RWSPVQSVEKILLSVVSMLAEPNDESGANVDAAKMWREDREEFNKRANKLVRKTL 114 (117)
Q Consensus 60 ~W~p~~t~~~il~~i~~ll~~p~~~~~~n~~a~~~~~~~~~~f~~~~~~~~~k~a 114 (117)
-|-.-.....+...|..-|..-+++ -+..|+.|.+.|.+..++.-+++.
T Consensus 105 vWldp~~~~~~a~~I~~~L~~~dP~------~a~~y~~N~~~~~~~L~~ld~~~~ 153 (282)
T 3mfq_A 105 FWFSIPLYKSAVAVASEELQKLLPA------KAEMIQKNTEKYQAQLDDLHAWVE 153 (282)
T ss_dssp GGGSHHHHHHHHHHHHHHHTTTCGG------GHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHhChh------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6766666777788888777654433 366788888888888776665543
No 76
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=25.95 E-value=41 Score=24.33 Aligned_cols=25 Identities=12% Similarity=0.341 Sum_probs=21.1
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP------------------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||-|-|.
T Consensus 153 ~~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 153 ENGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 4699999999999887 578888776
No 77
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=24.40 E-value=52 Score=22.83 Aligned_cols=23 Identities=9% Similarity=0.065 Sum_probs=20.2
Q ss_pred CEEEEEEEcCCCCCCC-----CCeEEEe
Q psy10005 3 TITPAKVTFPSDYPLS-----PPKMQFT 25 (117)
Q Consensus 3 g~f~~~i~fp~~YP~~-----pP~v~f~ 25 (117)
|.|.|+-.+|--||.. ||-|-|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 9999999999999987 7777666
No 78
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=23.94 E-value=43 Score=24.62 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=20.8
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP------------------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||-|-|.
T Consensus 182 ~dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 182 EEGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CCceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 4699999999998887 578888776
No 79
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=23.87 E-value=45 Score=24.87 Aligned_cols=25 Identities=12% Similarity=0.341 Sum_probs=21.5
Q ss_pred CCCEEEEEEEcCCCCC------------------CCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDYP------------------LSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP------------------~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--|| .+||-|-|.
T Consensus 186 ~~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 186 ENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CCceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 4699999999999997 568888776
No 80
>3q13_A Spondin-1; FS-domain, membrane targeting, AXON guidance, C2- derivative, glycosylated, extracellular matrix, cell adhesi; HET: NAG BMA; 1.95A {Homo sapiens}
Probab=23.16 E-value=57 Score=23.69 Aligned_cols=22 Identities=18% Similarity=0.350 Sum_probs=15.0
Q ss_pred CEEEEEEE-------cCCCCCCCCCeEEEec
Q psy10005 3 TITPAKVT-------FPSDYPLSPPKMQFTC 26 (117)
Q Consensus 3 g~f~~~i~-------fp~~YP~~pP~v~f~t 26 (117)
.+|++.+. ||++||.. | ..|..
T Consensus 21 A~Y~vtF~g~Ws~~~hPk~yP~~-~-~~fSp 49 (258)
T 3q13_A 21 AKYRLTFYGNWSEKTHPKDYPRR-A-NHWSA 49 (258)
T ss_dssp EEEEEEEEECCSTTTSCTTCCTT-T-CEECC
T ss_pred ceEEEEEEEEECCccCcccCCCC-c-ccccc
Confidence 36777776 89999943 3 55554
No 81
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=22.32 E-value=79 Score=22.91 Aligned_cols=25 Identities=20% Similarity=0.415 Sum_probs=20.3
Q ss_pred CCCEEEEEEEcCCCC------------------CCCCCeEEEe
Q psy10005 1 MDTITPAKVTFPSDY------------------PLSPPKMQFT 25 (117)
Q Consensus 1 ~gg~f~~~i~fp~~Y------------------P~~pP~v~f~ 25 (117)
+.|.|.|+-.+|--| |++||-|-|.
T Consensus 150 ~~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~ 192 (260)
T 3th1_A 150 SQGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFK 192 (260)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEE
T ss_pred CCCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEE
Confidence 479999999999666 5678888776
No 82
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=21.37 E-value=1e+02 Score=23.61 Aligned_cols=53 Identities=13% Similarity=0.178 Sum_probs=37.1
Q ss_pred EEEEEc-CCCCCCCCCeEEEecc--c-------ccccccCCCcEEecCCCCCCCCCCCCCCCCCCCCCcccHHHHHHHHH
Q psy10005 6 PAKVTF-PSDYPLSPPKMQFTCE--M-------FHPNIYADGRVCISILHAPGDDPMGYESSSERWSPVQSVEKILLSVV 75 (117)
Q Consensus 6 ~~~i~f-p~~YP~~pP~v~f~t~--i-------~HpnV~~~G~vcl~~l~~~~~~~~~~~~~~~~W~p~~t~~~il~~i~ 75 (117)
.+.|++ .+..|...|.++|.-+ . +.-|+ ..|.+..++.+=|..|-
T Consensus 231 Sl~IeV~DP~~Pr~lPe~~FlGpd~~V~~Lr~~l~~Nl-------------------------~~Wd~d~si~eNL~~IL 285 (381)
T 3k1l_B 231 YLKLTIADPFACIASMSLKIIGPTEEVARLRHVLSDGL-------------------------SNWDSEMNIHKNLLRMF 285 (381)
T ss_dssp EEEEEESCTTSTTTTEEEEEESSHHHHHHHHHHHHHHH-------------------------HTCCTTSCHHHHHHHHT
T ss_pred EEEEEeCCCCCCCcCceeEEECChhHhHHHHHHHhhhh-------------------------hhcCccCCHHHHHHHHh
Confidence 467778 7778999999999964 1 22222 27999999887777776
Q ss_pred HhhcCCCC
Q psy10005 76 SMLAEPND 83 (117)
Q Consensus 76 ~ll~~p~~ 83 (117)
.+..-|.+
T Consensus 286 ~i~~fP~p 293 (381)
T 3k1l_B 286 DLCYFPMP 293 (381)
T ss_dssp TCSSCCCC
T ss_pred CccccCCC
Confidence 66444543
No 83
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=21.27 E-value=1.1e+02 Score=17.12 Aligned_cols=20 Identities=15% Similarity=0.159 Sum_probs=17.1
Q ss_pred ccHHHHHHHHHCHHHHHHHH
Q psy10005 87 ANVDAAKMWREDREEFNKRA 106 (117)
Q Consensus 87 ~n~~a~~~~~~~~~~f~~~~ 106 (117)
.|++.+++...|.++|.+..
T Consensus 37 ~nP~l~~~I~~n~e~Fl~ll 56 (61)
T 2f4m_B 37 ENPQLLQQISQHQEHFIQML 56 (61)
T ss_dssp HCHHHHHHHHHSHHHHHHHH
T ss_pred HCHHHHHHHHHCHHHHHHHH
Confidence 57888999999999998865
No 84
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=20.15 E-value=73 Score=23.05 Aligned_cols=16 Identities=19% Similarity=0.115 Sum_probs=14.3
Q ss_pred CCCEEEEEEEcCCCCC
Q psy10005 1 MDTITPAKVTFPSDYP 16 (117)
Q Consensus 1 ~gg~f~~~i~fp~~YP 16 (117)
+.|.|.|+-.+|--||
T Consensus 155 ~~G~y~F~TI~Pg~Yp 170 (257)
T 3o5u_A 155 EDGSIEFHSIRPVPYE 170 (257)
T ss_dssp TTSEEEEEEECCCCEE
T ss_pred CCceEEEEEECCCCcC
Confidence 4699999999999996
No 85
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=20.04 E-value=1.2e+02 Score=18.36 Aligned_cols=23 Identities=26% Similarity=0.427 Sum_probs=18.2
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecc
Q psy10005 4 ITPAKVTFPSDYPLSPPKMQFTCE 27 (117)
Q Consensus 4 ~f~~~i~fp~~YP~~pP~v~f~t~ 27 (117)
.+...|+|+..|+. +|+|.+--.
T Consensus 30 ~~~~~V~F~~~F~~-~P~V~v~l~ 52 (101)
T 2ccv_A 30 ELAKNITFASPYCR-PPVVLLSIT 52 (101)
T ss_dssp EEEEEEECSSCCSS-CCEEEEEEE
T ss_pred EEEEEeEeCcccCC-CCEEEEEeE
Confidence 67788999999985 888877643
Done!