Query psy10014
Match_columns 72
No_of_seqs 113 out of 1043
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 15:41:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10014.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10014hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 99.9 5.7E-22 1.9E-26 122.0 9.6 63 10-72 1-63 (165)
2 1zdn_A Ubiquitin-conjugating e 99.9 2.6E-21 9E-26 118.4 9.9 66 6-72 6-71 (158)
3 2awf_A Ubiquitin-conjugating e 99.9 2.8E-21 9.7E-26 119.8 9.6 66 7-72 11-76 (172)
4 3h8k_A Ubiquitin-conjugating e 99.9 3.6E-21 1.2E-25 118.3 9.4 61 12-72 2-62 (164)
5 3rz3_A Ubiquitin-conjugating e 99.9 4.9E-21 1.7E-25 119.7 9.5 64 9-72 3-66 (183)
6 2fo3_A Ubiquitin-conjugating e 99.9 4.5E-21 1.6E-25 113.6 8.7 59 13-72 6-64 (125)
7 2c2v_B Ubiquitin-conjugating e 99.8 5.1E-21 1.7E-25 116.8 8.8 62 10-72 2-63 (154)
8 1ayz_A UBC2, ubiquitin-conjuga 99.8 4.4E-21 1.5E-25 118.7 8.2 62 10-72 1-62 (169)
9 2aak_A UBC1, ubiquitin conjuga 99.8 5.2E-21 1.8E-25 116.4 8.3 62 10-72 1-62 (152)
10 1yrv_A Ubiquitin-conjugating l 99.8 5.1E-21 1.7E-25 118.5 8.3 65 7-72 17-81 (169)
11 2h2y_A Ubiquitin-conjugating e 99.8 1.5E-20 5.2E-25 112.8 10.1 59 13-72 20-78 (136)
12 4gpr_A Ubiquitin-conjugating e 99.8 1.2E-20 4.1E-25 114.7 9.4 61 11-72 2-62 (151)
13 2e2c_A Ubiquitin conjugating e 99.8 1.1E-20 3.7E-25 115.4 9.0 63 9-72 5-67 (156)
14 1yh2_A HSPC150 protein similar 99.8 1.5E-20 5.2E-25 116.1 9.4 61 11-72 2-62 (169)
15 3rcz_B SUMO-conjugating enzyme 99.8 7.8E-21 2.7E-25 117.0 7.6 65 8-72 5-73 (163)
16 2gjd_A Ubiquitin-conjugating e 99.8 6.7E-21 2.3E-25 116.5 7.2 63 10-72 1-67 (157)
17 2ayv_A Ubiquitin-conjugating e 99.8 2.5E-20 8.5E-25 115.0 9.4 62 10-72 18-79 (166)
18 2c4o_A Ubiquitin-conjugating e 99.8 2.9E-20 9.9E-25 114.6 9.5 62 10-72 16-77 (165)
19 1z2u_A Ubiquitin-conjugating e 99.8 1.6E-20 5.3E-25 114.1 8.1 61 11-72 2-62 (150)
20 2a7l_A Hypothetical ubiquitin- 99.8 9.9E-21 3.4E-25 113.8 6.9 62 9-72 19-82 (136)
21 2grr_A Ubiquitin-conjugating e 99.8 1.3E-20 4.4E-25 115.7 7.6 64 9-72 3-70 (161)
22 1fxt_A Ubiquitin-conjugating e 99.8 1.7E-20 5.8E-25 113.8 7.7 59 14-72 2-60 (149)
23 2f4w_A Ubiquitin-conjugating e 99.8 1.9E-20 6.3E-25 117.5 7.9 63 9-72 10-72 (187)
24 1jat_A Ubiquitin-conjugating e 99.8 2.1E-20 7.1E-25 114.1 7.3 61 11-72 3-63 (155)
25 2bep_A Ubiquitin-conjugating e 99.8 5.4E-20 1.8E-24 112.6 9.0 63 9-72 4-69 (159)
26 2pwq_A Ubiquitin conjugating e 99.8 6.8E-20 2.3E-24 117.1 9.5 63 9-72 19-81 (216)
27 2a4d_A Ubiquitin-conjugating e 99.8 1E-19 3.4E-24 111.9 9.8 62 11-72 23-87 (160)
28 2q0v_A Ubiquitin-conjugating e 99.8 1.1E-19 3.8E-24 111.3 9.8 64 9-72 17-83 (156)
29 1i7k_A Ubiquitin-conjugating e 99.8 2.4E-20 8.3E-25 116.3 6.9 62 10-72 27-88 (179)
30 1jat_B Ubiquitin-conjugating e 99.8 7.9E-20 2.7E-24 109.8 8.8 61 12-72 5-68 (138)
31 2r0j_A Ubiquitin carrier prote 99.8 4.1E-20 1.4E-24 112.2 7.5 58 14-72 2-59 (149)
32 3k9o_A Ubiquitin-conjugating e 99.8 5.7E-20 2E-24 116.1 8.3 63 9-72 1-66 (201)
33 3bzh_A Ubiquitin-conjugating e 99.8 1.7E-19 5.8E-24 113.7 9.3 60 12-72 47-106 (194)
34 3e46_A Ubiquitin-conjugating e 99.8 1.5E-19 5.2E-24 117.8 9.2 65 7-72 51-118 (253)
35 3fn1_B NEDD8-conjugating enzym 99.8 2.2E-19 7.6E-24 110.5 8.7 64 8-72 9-72 (167)
36 2y9m_A Ubiquitin-conjugating e 99.8 1.9E-19 6.5E-24 111.5 8.4 64 9-72 2-76 (172)
37 2f4z_A Tgtwinscan_2721 - E2 do 99.8 2.3E-19 7.8E-24 113.1 7.6 60 12-72 31-103 (193)
38 2hlw_A Ubiquitin-conjugating e 99.8 3.1E-19 1.1E-23 110.6 7.2 61 12-72 34-97 (170)
39 1wzv_A Ubiquitin-conjugating e 99.8 4.9E-19 1.7E-23 107.9 7.4 60 12-72 3-62 (155)
40 4ds2_A Ubiquitin-conjugating e 99.8 2.3E-19 7.8E-24 110.6 5.4 64 8-72 3-80 (167)
41 1tte_A Ubiquitin-conjugating e 99.8 1.1E-19 3.7E-24 116.1 2.7 60 13-72 2-61 (215)
42 4ddg_A Ubiquitin-conjugating e 99.8 2.3E-18 8E-23 117.7 8.2 60 12-72 2-61 (399)
43 1y8x_A Ubiquitin-conjugating e 99.8 3.5E-18 1.2E-22 104.8 7.7 58 12-72 5-62 (160)
44 2nvu_C NEDD8-conjugating enzym 99.8 2.6E-18 9E-23 107.1 7.1 60 10-72 23-82 (180)
45 1c4z_D UBCH7, ubiquitin conjug 99.7 1.4E-18 4.9E-23 105.7 4.7 59 13-72 2-60 (154)
46 3ceg_A Baculoviral IAP repeat- 99.7 2E-17 6.8E-22 110.8 8.8 65 7-72 70-138 (323)
47 2onu_A Ubiquitin-conjugating e 99.7 4.6E-18 1.6E-22 103.5 4.6 56 13-72 2-57 (152)
48 1zuo_A Hypothetical protein LO 99.7 7.8E-18 2.7E-22 105.5 4.1 64 8-72 22-100 (186)
49 2z5d_A Ubiquitin-conjugating e 99.7 3.4E-17 1.1E-21 102.2 6.2 59 9-72 19-79 (179)
50 1yf9_A Ubiquitin carrier prote 99.7 1E-16 3.5E-21 99.2 7.1 55 13-72 12-66 (171)
51 3o2u_A NEDD8-conjugating enzym 99.7 3.2E-16 1.1E-20 98.4 7.7 62 8-72 24-91 (190)
52 2z6o_A UFM1-conjugating enzyme 99.4 6.3E-14 2.1E-18 86.6 0.4 53 13-72 32-94 (172)
53 3kpa_A Probable ubiquitin fold 98.2 2.6E-07 8.8E-12 56.4 0.4 61 5-72 26-96 (168)
54 3r3q_A Suppressor protein STP2 94.2 0.088 3E-06 32.0 4.6 56 15-72 30-92 (162)
55 3obq_A Tumor susceptibility ge 83.4 1.1 3.9E-05 26.6 3.1 29 40-72 50-80 (146)
56 3u3c_B Paxillin LD2 peptide; 4 59.4 7.6 0.00026 16.1 1.9 20 14-33 6-25 (26)
57 2k6w_A Putative uncharacterize 37.2 48 0.0016 18.6 3.6 26 46-71 82-107 (120)
58 2nqc_A Filamin-C; immunoglobul 36.7 54 0.0018 18.8 3.8 28 44-71 76-119 (138)
59 3cxj_A Uncharacterized protein 34.8 75 0.0026 19.1 5.6 34 19-55 5-38 (165)
60 2vqc_A Hypothetical 13.2 kDa p 34.2 61 0.0021 17.9 3.9 38 10-47 41-78 (118)
61 2rp4_A Transcription factor P5 31.7 32 0.0011 18.1 2.0 23 42-71 8-30 (76)
62 3rco_A Tudor domain-containing 30.1 41 0.0014 18.2 2.4 20 13-32 29-48 (89)
63 3t63_M 3,4-PCD, protocatechuat 29.2 11 0.00039 24.0 -0.0 19 43-61 220-238 (238)
64 1v05_A Filamin C; actin-bindin 25.6 78 0.0027 16.4 3.8 14 57-70 69-82 (96)
65 2lw9_A Unconventionnal myosin- 24.7 53 0.0018 15.9 1.9 15 13-27 6-20 (51)
66 4dac_A Computationally designe 24.0 51 0.0017 13.7 2.1 15 13-27 8-22 (28)
67 2dj4_A Filamin-B; beta-sandwic 23.1 96 0.0033 16.5 4.6 14 57-70 75-88 (108)
68 2rf4_B DNA-directed RNA polyme 23.0 39 0.0013 18.4 1.4 13 13-25 62-74 (87)
69 3s93_A Tudor domain-containing 22.9 65 0.0022 17.7 2.4 20 13-32 27-46 (102)
70 1x9l_A CUI-DR1885; copper bind 22.8 74 0.0025 18.6 2.7 26 46-71 107-132 (149)
71 2bsj_A Chaperone protein SYCT; 22.4 74 0.0025 18.2 2.6 14 54-67 22-35 (133)
72 1dul_A Signal recognition part 22.1 34 0.0012 17.6 1.0 26 2-27 39-64 (69)
73 2dmb_A Filamin-B; beta-sandwic 21.4 1.2E+02 0.004 16.8 4.2 14 57-70 75-88 (124)
74 3cnk_A Filamin-A; FLNA24, X-RA 20.6 99 0.0034 15.7 4.2 14 57-70 62-75 (89)
75 2jz2_A SSL0352 protein; SH3-li 20.2 50 0.0017 16.9 1.4 42 30-71 3-49 (66)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.87 E-value=5.7e-22 Score=121.98 Aligned_cols=63 Identities=35% Similarity=0.587 Sum_probs=58.6
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
|++.+.+||++|+++|++++++||.+.+.+++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~ 63 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKD 63 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCcc
Confidence 677899999999999999999999999976679999999999999999999999999999975
No 2
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.86 E-value=2.6e-21 Score=118.43 Aligned_cols=66 Identities=30% Similarity=0.426 Sum_probs=60.2
Q ss_pred cCCCCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 6 FYTGPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 6 ~~~~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
....+|..+.+||++|+++|++++++||.+.+ +++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 6 ~~~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 71 (158)
T 1zdn_A 6 NVENLPPHIIRLVYKEVTTLTADPPDGIKVFP-NEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKD 71 (158)
T ss_dssp --CCSCHHHHHHHHHHHHHHHHSCCTTEEEEE-CSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cccccCHHHHHHHHHHHHHHHhCCCCCEEEEE-CCCChhheeEEEECCCCCCccCcEEEEEEEcCCC
Confidence 34568889999999999999999999999998 5679999999999999999999999999999975
No 3
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.86 E-value=2.8e-21 Score=119.79 Aligned_cols=66 Identities=33% Similarity=0.517 Sum_probs=59.9
Q ss_pred CCCCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 7 YTGPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 7 ~~~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+.+..+.+||++|+++|++++++||.+.+.+++|++.|+++|.||++|||+||.|++.|.||++
T Consensus 11 ~~~~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~ 76 (172)
T 2awf_A 11 SSGLVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKD 76 (172)
T ss_dssp --CCCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cCCChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcc
Confidence 446677899999999999999999999999876679999999999999999999999999999975
No 4
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.86 E-value=3.6e-21 Score=118.25 Aligned_cols=61 Identities=61% Similarity=1.017 Sum_probs=57.2
Q ss_pred hhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
..+.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~ 62 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLD 62 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCC
Confidence 4689999999999999999999999976669999999999999999999999999999975
No 5
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.85 E-value=4.9e-21 Score=119.66 Aligned_cols=64 Identities=30% Similarity=0.487 Sum_probs=58.1
Q ss_pred CCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.++.+.+||++|+++|++++++||++.+.+++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~ 66 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPID 66 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCC
Confidence 3456789999999999999999999999667789999999999999999999999999999975
No 6
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.85 E-value=4.5e-21 Score=113.58 Aligned_cols=59 Identities=17% Similarity=0.092 Sum_probs=53.4
Q ss_pred hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 13 IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+.+||++|+++|++++++||.+.+ +++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~-~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~ 64 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDV-HPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDD 64 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEE-CTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEe-CcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCC
Confidence 4789999999999999999999998 5689999999999999999999999999999975
No 7
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.85 E-value=5.1e-21 Score=116.76 Aligned_cols=62 Identities=29% Similarity=0.301 Sum_probs=57.8
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+|..+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~ 63 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPD-ESNARYFHVVIAGPQDSPFEGGTFKLELFLPEE 63 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchheEEEEEECCCCCCcCCCeEEEEEEcCCC
Confidence 56678899999999999999999999985 579999999999999999999999999999975
No 8
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.85 E-value=4.4e-21 Score=118.68 Aligned_cols=62 Identities=24% Similarity=0.399 Sum_probs=57.4
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
||+.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~ 62 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPL-PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEE 62 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEec-CCccccceEEEECCCCCCcCCCEEEEEEECccc
Confidence 56788999999999999999999999985 679999999999999999999999999999974
No 9
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.85 E-value=5.2e-21 Score=116.36 Aligned_cols=62 Identities=27% Similarity=0.487 Sum_probs=58.0
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
||+.+.+||++|+++|++++++||.+.+. ++|++.|+++|.||++|||+||.|++.|.||++
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 62 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSED 62 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeC-CCCccEEEEEEeCCCCCCccCCEEEEEEECCCC
Confidence 57788999999999999999999999985 679999999999999999999999999999975
No 10
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.85 E-value=5.1e-21 Score=118.46 Aligned_cols=65 Identities=25% Similarity=0.306 Sum_probs=59.6
Q ss_pred CCCCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 7 YTGPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 7 ~~~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
...|++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 17 ~~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 81 (169)
T 1yrv_A 17 RGSMHGRAYLLLHRDFCDLKENNYKGITAKPV-SEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSE 81 (169)
T ss_dssp TTGGGCHHHHHHHHHHHHHHHHCCTTEEEEEC-STTSCEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cCccChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccccceeEEECCCCCCccceEEEEEEECCcc
Confidence 34577789999999999999999999999985 579999999999999999999999999999975
No 11
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.85 E-value=1.5e-20 Score=112.78 Aligned_cols=59 Identities=17% Similarity=0.100 Sum_probs=55.5
Q ss_pred hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 13 IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+.+||++|+++|++++++||.+.+ +++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~-~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~ 78 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDV-HPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDN 78 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEE-CTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEe-ccccccccEEEEECCCCCceeCCEEEEEEEeCCC
Confidence 5789999999999999999999998 4679999999999999999999999999999975
No 12
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.84 E-value=1.2e-20 Score=114.75 Aligned_cols=61 Identities=28% Similarity=0.571 Sum_probs=57.1
Q ss_pred ChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 11 SRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 11 s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 62 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPV-GDDIFHWTATITGPDDSPYQGGLFFLDVHFPVD 62 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCSSSTTTTCEEEEEEECCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCceEEEEEEeCCCCCCcCCCEEEEEEECCCC
Confidence 4578999999999999999999999995 579999999999999999999999999999975
No 13
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.84 E-value=1.1e-20 Score=115.44 Aligned_cols=63 Identities=21% Similarity=0.260 Sum_probs=58.0
Q ss_pred CCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 5 ~~~~~~~~RL~kEl~~l~~~~~~~i~~~p~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 67 (156)
T 2e2c_A 5 KERHSVSKRLQQELRTLLMSGDPGITAFPD-GDNLFKWVATLDGPKDTVYESLKYKLTLEFPSD 67 (156)
T ss_dssp CSCCCHHHHHHHHHHHHHHHCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred ccchHHHHHHHHHHHHHHhCCCCCEEEEEC-CCCccEEEEEEECCCCCCcCCcEEEEEEECCCC
Confidence 456678999999999999999999999985 579999999999999999999999999999975
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.84 E-value=1.5e-20 Score=116.14 Aligned_cols=61 Identities=26% Similarity=0.222 Sum_probs=57.1
Q ss_pred ChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 11 SRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 11 s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
|+.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~ 62 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQD-KDQMDDLRAQILGGANTPYEKGVFKLEVIIPER 62 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEEeCCC
Confidence 5678999999999999999999999984 679999999999999999999999999999975
No 15
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.84 E-value=7.8e-21 Score=117.01 Aligned_cols=65 Identities=18% Similarity=0.294 Sum_probs=56.6
Q ss_pred CCCChhhhhHHHHHHHHHhhCCCCCEEEeecCC-C---CcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 8 TGPSRIELSPEIINCVELTINPPEGIIAGPVNE-E---NFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 8 ~~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~-~---nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
..-|.+|.+||+||+++|++++++||.+.+.++ + |+++|+++|.||++|||+||.|++.|.||++
T Consensus 5 ~~~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~ 73 (163)
T 3rcz_B 5 HHHSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEE 73 (163)
T ss_dssp ----CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cCCcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCC
Confidence 345678999999999999999999999998642 2 8999999999999999999999999999975
No 16
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.84 E-value=6.7e-21 Score=116.52 Aligned_cols=63 Identities=30% Similarity=0.418 Sum_probs=56.2
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCC----CCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNE----ENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~----~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
||+.+.+||++|+++|++++++||.+.+.++ +|+++|+++|.||++|||+||.|++.|.||++
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~ 67 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNE 67 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCC
Confidence 5678899999999999999999999988532 48999999999999999999999999999975
No 17
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.83 E-value=2.5e-20 Score=115.03 Aligned_cols=62 Identities=31% Similarity=0.502 Sum_probs=56.8
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 79 (166)
T 2ayv_A 18 YFQGALKRINKELNDLSKDPPTNCSAGPV-GDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSD 79 (166)
T ss_dssp -CTTHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeeEEEECCCCCCcCCCEEEEEEeCCCc
Confidence 34568999999999999999999999984 579999999999999999999999999999975
No 18
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.83 E-value=2.9e-20 Score=114.60 Aligned_cols=62 Identities=29% Similarity=0.543 Sum_probs=57.3
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
..+.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 16 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~ 77 (165)
T 2c4o_A 16 RGSMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTD 77 (165)
T ss_dssp CCHHHHHHHHHHHHHHHSSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeEEEEECCCCCCccCceEEEEEECCCc
Confidence 34578999999999999999999999985 579999999999999999999999999999975
No 19
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.83 E-value=1.6e-20 Score=114.05 Aligned_cols=61 Identities=31% Similarity=0.557 Sum_probs=56.6
Q ss_pred ChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 11 SRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 11 s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
|..+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 62 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPV-GDDLFHWQATIMGPPESPYQGGVFFLTIHFPTD 62 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEC-CCcceEEEEEEECCCCCCcCCCEEEEEEECCCC
Confidence 4568899999999999999999999985 579999999999999999999999999999975
No 20
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.83 E-value=9.9e-21 Score=113.75 Aligned_cols=62 Identities=19% Similarity=0.284 Sum_probs=55.1
Q ss_pred CCChhhhhHHHHHHHHHhhCCCCCEEEe--ecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTINPPEGIIAG--PVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~~~~~i~~~--~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.|+. +.+||++|+++|++++++||.+. + +++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 19 ~Ms~-~~~RL~kEl~~l~~~~~~gi~v~~~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 82 (136)
T 2a7l_A 19 SMAS-MQKRLQKELLALQNDPPPGMTLNEKS-VQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSR 82 (136)
T ss_dssp GGTT-SCHHHHHHHHHHHHSCCTTCCCCTTC-CCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTT
T ss_pred hccH-HHHHHHHHHHHHHhCCCCCEEEEEee-CccccceeEEEEECCCCCccccEEEEEEEECCCC
Confidence 3554 34999999999999999999975 5 5679999999999999999999999999999975
No 21
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.83 E-value=1.3e-20 Score=115.66 Aligned_cols=64 Identities=30% Similarity=0.414 Sum_probs=58.0
Q ss_pred CCChhhhhHHHHHHHHHhhCCCCCEEEeecC----CCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTINPPEGIIAGPVN----EENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~----~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.|++.+.+||++|+++|++++++||.+.+.. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 70 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDD 70 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcc
Confidence 5788899999999999999999999998752 358999999999999999999999999999975
No 22
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.83 E-value=1.7e-20 Score=113.80 Aligned_cols=59 Identities=20% Similarity=0.322 Sum_probs=55.1
Q ss_pred hhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 14 ELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 14 ~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+||++|+++|++++++||.+.+.+++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~ 60 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPME 60 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTT
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCC
Confidence 57999999999999999999999975459999999999999999999999999999975
No 23
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.83 E-value=1.9e-20 Score=117.48 Aligned_cols=63 Identities=24% Similarity=0.383 Sum_probs=55.9
Q ss_pred CCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 10 ~~~~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~ 72 (187)
T 2f4w_A 10 RAPTTATQRLKQDYLRIKKDPVPYICAEPL-PSNILEWHYVVRGPEMTPYEGGYYHGKLIFPRE 72 (187)
T ss_dssp ----CHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CCccHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCCCCCEEEEEEEcCCC
Confidence 445678999999999999999999999985 579999999999999999999999999999975
No 24
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.82 E-value=2.1e-20 Score=114.08 Aligned_cols=61 Identities=25% Similarity=0.346 Sum_probs=56.3
Q ss_pred ChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 11 SRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 11 s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 3 ~~~~~~RL~kE~~~l~~~~~~~i~~~~~-~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~ 63 (155)
T 1jat_A 3 AASLPKRIIKETEKLVSDPVPGITAEPH-DDNLRYFQVTIEGPEQSPYEDGIFELELYLPDD 63 (155)
T ss_dssp CCSCCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTEEEEEEEECCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchhEEEEEEECCCCCCccCcEEEEEEEcCCC
Confidence 3467899999999999999999999985 579999999999999999999999999999975
No 25
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.82 E-value=5.4e-20 Score=112.63 Aligned_cols=63 Identities=27% Similarity=0.318 Sum_probs=57.4
Q ss_pred CCChhhhhHHHHHHHHHhhC---CCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTIN---PPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~---~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.|++.+.+||++|+++|+++ +++||.+.+. ++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 69 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPET 69 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-SSSSSEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEEeCCCc
Confidence 47778999999999999985 5889999985 569999999999999999999999999999975
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.82 E-value=6.8e-20 Score=117.14 Aligned_cols=63 Identities=32% Similarity=0.396 Sum_probs=58.1
Q ss_pred CCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+++.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~ 81 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAHIK-DSNFFEWVGFIKGPEGTPYEGGHFTLAITIPND 81 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCccceEEEEEEECCCc
Confidence 345678999999999999999999999995 579999999999999999999999999999975
No 27
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.82 E-value=1e-19 Score=111.91 Aligned_cols=62 Identities=18% Similarity=0.226 Sum_probs=55.4
Q ss_pred ChhhhhHHHHHHHHHhhCCCCC-EEEeecCCCC--cceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 11 SRIELSPEIINCVELTINPPEG-IIAGPVNEEN--FFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 11 s~~~~~Rl~kE~~~l~~~~~~~-i~~~~~~~~n--l~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
...+.+||++|+++|++++++| +.+.+.+++| +++|+++|.||++|||+||.|+++|.||++
T Consensus 23 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 87 (160)
T 2a4d_A 23 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPK 87 (160)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred echHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCc
Confidence 3578899999999999998888 7888755555 999999999999999999999999999975
No 28
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.82 E-value=1.1e-19 Score=111.26 Aligned_cols=64 Identities=16% Similarity=0.110 Sum_probs=56.8
Q ss_pred CCChhhhhHHHHHHHHHhhC-CCCCEEEeecCCC--CcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTIN-PPEGIIAGPVNEE--NFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~-~~~~i~~~~~~~~--nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
..+..+.+||++|+++|+++ +++||.+.+.+++ |+++|+++|.||++|||+||.|+++|.||++
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 83 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDN 83 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCc
Confidence 44567889999999999998 7899999986433 6999999999999999999999999999975
No 29
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.82 E-value=2.4e-20 Score=116.35 Aligned_cols=62 Identities=21% Similarity=0.266 Sum_probs=55.8
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
|+..+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 88 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPE-SDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSG 88 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEE-TTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTT
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcccccEEEEECCCCCCcCCCEEEEEEECCCc
Confidence 56778999999999999999999999985 579999999999999999999999999999975
No 30
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.82 E-value=7.9e-20 Score=109.78 Aligned_cols=61 Identities=13% Similarity=0.131 Sum_probs=52.1
Q ss_pred hhhhhHHHHHHHHHhhC-CCCCEEEeecCCC--CcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTIN-PPEGIIAGPVNEE--NFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~-~~~~i~~~~~~~~--nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
..+.+||++|+++|+++ +++||++.+.+++ |+++|+++|.||++|||+||.|+++|.||++
T Consensus 5 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~ 68 (138)
T 1jat_B 5 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPN 68 (138)
T ss_dssp CCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCC
Confidence 35679999999999998 7899999986433 5999999999999999999999999999975
No 31
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.82 E-value=4.1e-20 Score=112.16 Aligned_cols=58 Identities=33% Similarity=0.519 Sum_probs=54.2
Q ss_pred hhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 14 ELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 14 ~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 59 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPV-PENYRHFNILINGPDGTPYEGGTYKLELFLPEQ 59 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEeCCcc
Confidence 4689999999999999999999985 579999999999999999999999999999975
No 32
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.82 E-value=5.7e-20 Score=116.08 Aligned_cols=63 Identities=29% Similarity=0.351 Sum_probs=55.6
Q ss_pred CCChhhhhHHHHHHHHHhhC---CCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTIN---PPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~~---~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+||..+.+||++|+++|+++ ++.||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 1 ~Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 66 (201)
T 3k9o_A 1 GMANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPET 66 (201)
T ss_dssp ---CTTHHHHHHHHHHHHTCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCCccEEEEEEECCCCCCCCCCEEEEEEECCCc
Confidence 37888999999999999886 3789999995 579999999999999999999999999999975
No 33
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.81 E-value=1.7e-19 Score=113.72 Aligned_cols=60 Identities=30% Similarity=0.591 Sum_probs=56.0
Q ss_pred hhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+.+||++|+++|++++++||.+.+. ++|+++|+++|.||++|||+||.|+|.|.||++
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 106 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPK-GDNIYEWRSTILGPPGSVYEGGVFFLDITFTPE 106 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecc-cCccccceEEEeCCCCCCccCCEEEEEEECCCc
Confidence 357899999999999999999999985 679999999999999999999999999999975
No 34
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.81 E-value=1.5e-19 Score=117.77 Aligned_cols=65 Identities=26% Similarity=0.282 Sum_probs=58.3
Q ss_pred CCCCChhhhhHHHHHHHHHhhC---CCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 7 YTGPSRIELSPEIINCVELTIN---PPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 7 ~~~~s~~~~~Rl~kE~~~l~~~---~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
...|+..+.+||++|+++|+++ ++.||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 51 ~~~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~-~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 118 (253)
T 3e46_A 51 EFDMANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEIKIPET 118 (253)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cccccHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEEECCCC
Confidence 3457788999999999999887 4789999995 579999999999999999999999999999975
No 35
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.80 E-value=2.2e-19 Score=110.55 Aligned_cols=64 Identities=14% Similarity=0.187 Sum_probs=58.3
Q ss_pred CCCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 8 TGPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 8 ~~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+..++.+.+||++|+++|++++++||.+.+.+++|++.|+++| ||++|||+||.|++.|.||++
T Consensus 9 ~~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~ 72 (167)
T 3fn1_B 9 TRRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDA 72 (167)
T ss_dssp CCCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTT
T ss_pred ccchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCC
Confidence 4455689999999999999999999999976678999999998 899999999999999999975
No 36
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.80 E-value=1.9e-19 Score=111.51 Aligned_cols=64 Identities=22% Similarity=0.291 Sum_probs=54.0
Q ss_pred CCChhhhhHHHHHHHHHhh-C-C------CC---CEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSRIELSPEIINCVELTI-N-P------PE---GIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~~~~~Rl~kE~~~l~~-~-~------~~---~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.|+..+.+||++|+++|++ . + +. ++.+.+.+++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~ 76 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSS 76 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCc
Confidence 4778899999999999998 4 3 33 46677745679999999999999999999999999999975
No 37
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.79 E-value=2.3e-19 Score=113.07 Aligned_cols=60 Identities=25% Similarity=0.379 Sum_probs=52.4
Q ss_pred hhhhhHHHHHHHHHhhCCC-------------CCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTINPP-------------EGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~~~-------------~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+.+||++|+++|+++++ +||.+.+. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 103 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIV-GGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPD 103 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEc-CCCcceEEEEEeCCCCCCcCCCEEEEEEECCCc
Confidence 4578999999999999876 79999986 479999999999999999999999999999975
No 38
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.79 E-value=3.1e-19 Score=110.57 Aligned_cols=61 Identities=18% Similarity=0.229 Sum_probs=54.2
Q ss_pred hhhhhHHHHHHHHHhhCCCCC-EEEeecCCCC--cceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTINPPEG-IIAGPVNEEN--FFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~~~~~-i~~~~~~~~n--l~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
..+.+||++|+++|++++++| +.+.+.+++| +++|+++|.||++|||+||.|+++|.||++
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~ 97 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPK 97 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSS
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCC
Confidence 457899999999999998888 7787755554 999999999999999999999999999975
No 39
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.78 E-value=4.9e-19 Score=107.90 Aligned_cols=60 Identities=15% Similarity=0.251 Sum_probs=53.5
Q ss_pred hhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+.+||++|+++|++++++||.+...+++|+++|+++|. |++|||+||.|++.|.||++
T Consensus 3 m~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~ 62 (155)
T 1wzv_A 3 HMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPE 62 (155)
T ss_dssp --CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTT
T ss_pred chHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCC
Confidence 3578999999999999999999994336789999999999 99999999999999999975
No 40
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.78 E-value=2.3e-19 Score=110.62 Aligned_cols=64 Identities=11% Similarity=0.151 Sum_probs=57.0
Q ss_pred CCCChhhhhHHHHHHHHHhhCC------------CCCEEEeecCCCCcceEEEEEECCCCCCCC--CcEEEEEEEecCC
Q psy10014 8 TGPSRIELSPEIINCVELTINP------------PEGIIAGPVNEENFFEWEALITGPEGTCFE--GGVFPAKDKILLS 72 (72)
Q Consensus 8 ~~~s~~~~~Rl~kE~~~l~~~~------------~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~--gg~f~~~i~fp~~ 72 (72)
..||+.+.+||++|+++|++++ +.++.+.+ +++|+++|+++|.||++|||+ ||.|++.|.||++
T Consensus 3 ~~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~-~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~ 80 (167)
T 4ds2_A 3 GSMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSV-DTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDD 80 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEE-EESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTT
T ss_pred ccccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEe-CCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCC
Confidence 3578889999999999999876 77899988 467999999999999999999 9999999999975
No 41
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.77 E-value=1.1e-19 Score=116.14 Aligned_cols=60 Identities=20% Similarity=0.307 Sum_probs=55.3
Q ss_pred hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 13 IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+.+||++|+++|++++++||.+.+.+++++++|+++|.||++|||+||.|++.|.||++
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~ 61 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPME 61 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCcc
Confidence 478999999999999999999999976556889999999999999999999999999975
No 42
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.76 E-value=2.3e-18 Score=117.65 Aligned_cols=60 Identities=30% Similarity=0.562 Sum_probs=56.5
Q ss_pred hhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+.+||++|+++|++++++||.+.|. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 61 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTD 61 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSSSTTCEEEEEEECCSS
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcceEEEEEEECCCCCCCCCCEEEEEEECCcc
Confidence 468999999999999999999999985 579999999999999999999999999999975
No 43
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.75 E-value=3.5e-18 Score=104.80 Aligned_cols=58 Identities=16% Similarity=0.178 Sum_probs=52.1
Q ss_pred hhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 12 RIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 12 ~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+.+.+||++|+++| ++++||.+..++++|+++|+++| ||++|||+||.|++.|.||++
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~ 62 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQG 62 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTT
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCc
Confidence 46899999999999 57889999843578999999998 999999999999999999975
No 44
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.75 E-value=2.6e-18 Score=107.14 Aligned_cols=60 Identities=15% Similarity=0.175 Sum_probs=53.4
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.++.+.+||++|+++| ++++||.+..++++|+++|+++| ||++|||+||.|++.|.||++
T Consensus 23 ~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~ 82 (180)
T 2nvu_C 23 KASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQG 82 (180)
T ss_dssp SCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTT
T ss_pred CccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCc
Confidence 4457899999999999 57889999844578999999998 999999999999999999975
No 45
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.74 E-value=1.4e-18 Score=105.75 Aligned_cols=59 Identities=17% Similarity=0.274 Sum_probs=52.8
Q ss_pred hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 13 IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+.+||++|+++|++++++|+.+.+.+++|+++|+++|. |++|||+||.|++.|.||++
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~ 60 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAE 60 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCC
Confidence 467899999999999999999877656789999999998 99999999999999999975
No 46
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.72 E-value=2e-17 Score=110.82 Aligned_cols=65 Identities=22% Similarity=0.225 Sum_probs=56.9
Q ss_pred CCCCChhhhhHHHHHHHHHhhCCCCC----EEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 7 YTGPSRIELSPEIINCVELTINPPEG----IIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 7 ~~~~s~~~~~Rl~kE~~~l~~~~~~~----i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
...+|..+.+||++|+++|++++++| +.+.+ +++|++.|+++|.||++|||+||.|+|.|.||++
T Consensus 70 ~~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~-~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~d 138 (323)
T 3ceg_A 70 NDANSAARARRLAQEAVTLSTSLPLSSSSSVFVRC-DEERLDIMKVLITGPADTPYANGCFEFDVYFPQD 138 (323)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEE-ESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTT
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCCCcccceeecc-cCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCC
Confidence 34578899999999999999988775 45555 4679999999999999999999999999999975
No 47
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.72 E-value=4.6e-18 Score=103.54 Aligned_cols=56 Identities=18% Similarity=0.374 Sum_probs=49.8
Q ss_pred hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 13 IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+.+||++|+++|+++ |+.+.+. ++|+++|+++|.||++|||+||.|+++|.||++
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~ 57 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELN-NGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDD 57 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEc-cCccceEEEEEECCCCCcccceEEEEEEcCccc
Confidence 3578999999999874 6888885 579999999999999999999999999999975
No 48
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.70 E-value=7.8e-18 Score=105.48 Aligned_cols=64 Identities=3% Similarity=-0.001 Sum_probs=56.8
Q ss_pred CCCChhhhhHHHHHHHHHhhCC---CCCEEEeecCCCCcceEEEEEECC-CCCCCCC-----------cEEEEEEEecCC
Q psy10014 8 TGPSRIELSPEIINCVELTINP---PEGIIAGPVNEENFFEWEALITGP-EGTCFEG-----------GVFPAKDKILLS 72 (72)
Q Consensus 8 ~~~s~~~~~Rl~kE~~~l~~~~---~~~i~~~~~~~~nl~~w~~~i~GP-~~tpy~g-----------g~f~~~i~fp~~ 72 (72)
..|+..+.+||++|+++|++++ +.+|.+.+. ++|+++|+++|.|| ++|||+| |.|+++|.||++
T Consensus 22 ~~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~-~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~ 100 (186)
T 1zuo_A 22 VSGSVQASDRLMKELRDIYRSQSYKTGIYSVELI-NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDN 100 (186)
T ss_dssp --CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEE-TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTT
T ss_pred ccccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEc-CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCC
Confidence 4577889999999999999988 688999985 47999999999998 8999998 899999999975
No 49
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.69 E-value=3.4e-17 Score=102.17 Aligned_cols=59 Identities=19% Similarity=0.198 Sum_probs=49.6
Q ss_pred CCCh--hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 9 GPSR--IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 9 ~~s~--~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.|++ .+.+||++|+++|+. +||.+.+. +|+++|+++|.||++|||+||.|++.|.||++
T Consensus 19 ~ms~~~~a~~RL~kEl~~l~~---~g~~v~~~--ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~ 79 (179)
T 2z5d_A 19 SMSSPSPGKRRMDTDVIKLIE---SKHEVTIL--GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 79 (179)
T ss_dssp ----CCHHHHHHHHHHHHHHH---SSSCEEEE--EETTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cCCCchHHHHHHHHHHHhcCc---CCCEEEEC--CCCceeEEEEECCCCCCccCCEEEEEeeCCCC
Confidence 3544 478999999999985 57888885 47999999999999999999999999999975
No 50
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.68 E-value=1e-16 Score=99.25 Aligned_cols=55 Identities=16% Similarity=0.216 Sum_probs=48.0
Q ss_pred hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 13 IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
.+.+||++|+++|++++. ++ +. ++|+++|+++|.||++|||+||.|++.|.||++
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~ 66 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSD 66 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCC
Confidence 678999999999998874 43 33 579999999999999999999999999999975
No 51
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.66 E-value=3.2e-16 Score=98.37 Aligned_cols=62 Identities=8% Similarity=-0.001 Sum_probs=53.9
Q ss_pred CCCChhhhhHHHHHHHHHhhCCCCCEEEee---cCCCCcc---eEEEEEECCCCCCCCCcEEEEEEEecCC
Q psy10014 8 TGPSRIELSPEIINCVELTINPPEGIIAGP---VNEENFF---EWEALITGPEGTCFEGGVFPAKDKILLS 72 (72)
Q Consensus 8 ~~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~---~~~~nl~---~w~~~i~GP~~tpy~gg~f~~~i~fp~~ 72 (72)
+..++.+.+||++|+++|+ +++|+.+.. ++++|++ +|+++|. |++|||+||.|++.|.||++
T Consensus 24 ~~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~ 91 (190)
T 3o2u_A 24 QPNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEV 91 (190)
T ss_dssp SCCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTT
T ss_pred CCCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCC
Confidence 3455688999999999998 688999982 3678999 9999997 78899999999999999975
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.36 E-value=6.3e-14 Score=86.56 Aligned_cols=53 Identities=19% Similarity=0.157 Sum_probs=46.5
Q ss_pred hhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCc----------EEEEEEEecCC
Q psy10014 13 IELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGG----------VFPAKDKILLS 72 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg----------~f~~~i~fp~~ 72 (72)
...+||++|++.|++. +.+ +++|+++|.+.+.||++|+|+|| .|+++|+||++
T Consensus 32 ~w~~RL~eE~k~L~k~------v~p-~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~ 94 (172)
T 2z6o_A 32 LWVQRLKEEYQSLIRY------VEN-NKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPIT 94 (172)
T ss_dssp HHHHHHHHHHHHHHHH------HHH-HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHHH------hcc-CccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCC
Confidence 3499999999999882 444 45799999999999999999999 99999999975
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=98.19 E-value=2.6e-07 Score=56.38 Aligned_cols=61 Identities=18% Similarity=0.122 Sum_probs=44.3
Q ss_pred ccCCCCChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCCCCCCCc----------EEEEEEEecCC
Q psy10014 5 KFYTGPSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWEALITGPEGTCFEGG----------VFPAKDKILLS 72 (72)
Q Consensus 5 ~~~~~~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~tpy~gg----------~f~~~i~fp~~ 72 (72)
+..++-...-..||+.|++.|.+. +.. +.++=.+|...+.||++|+|.|+ .|.++++||.+
T Consensus 26 ~agPrd~~~w~~RlkeEy~alI~y----v~~---nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~t 96 (168)
T 3kpa_A 26 KAGPRDGDKWTARLKEEYASLITY----VEH---NKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVT 96 (168)
T ss_dssp CCCTTSTHHHHHHHHHHHHHHHHH----HHH---HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHH----HHh---cccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCcc
Confidence 334444445689999999998541 111 11222469999999999999999 99999999974
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=94.17 E-value=0.088 Score=31.97 Aligned_cols=56 Identities=13% Similarity=-0.020 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHhhCCCCCEEE----eecCCCCcceEEEEEECCCCCCCCCcE---EEEEEEecCC
Q psy10014 15 LSPEIINCVELTINPPEGIIA----GPVNEENFFEWEALITGPEGTCFEGGV---FPAKDKILLS 72 (72)
Q Consensus 15 ~~Rl~kE~~~l~~~~~~~i~~----~~~~~~nl~~w~~~i~GP~~tpy~gg~---f~~~i~fp~~ 72 (72)
..|..+|...+... -+++.. .. .++...++-+.+.|+-.++|+||. |.+.|.||++
T Consensus 30 ~~~~~~dv~~~l~~-yp~L~p~t~~yt-~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~ 92 (162)
T 3r3q_A 30 GRTTFHDSLALLDN-FHSLRPRTRVFT-HSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSM 92 (162)
T ss_dssp HHHHHHHHHHHHHH-CTTEEEEEEEEE-CTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTT
T ss_pred hhHHHHHHHHHHHh-CCCCceeeeeEE-cCCCChheEEEEECccCccccCcccccccEEEEeCcc
Confidence 45677777776542 222332 33 235566777777777779999999 8889988874
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=83.40 E-value=1.1 Score=26.59 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=23.6
Q ss_pred CCCcceEEEEEECCCCCCCCCcEEEE--EEEecCC
Q psy10014 40 EENFFEWEALITGPEGTCFEGGVFPA--KDKILLS 72 (72)
Q Consensus 40 ~~nl~~w~~~i~GP~~tpy~gg~f~~--~i~fp~~ 72 (72)
..+|..|.++|. .+|+|+.|.+ .|-||++
T Consensus 50 ~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~ 80 (146)
T 3obq_A 50 SRELMNLTGTIP----VPYRGNTYNIPICLWLLDT 80 (146)
T ss_dssp TCEEEEEEEEEE----EECSSCEEEEEEEEECCTT
T ss_pred hheEEEEEEEee----eeecCccccceEEEEeCcc
Confidence 358999999996 6899999995 7777753
No 56
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=59.40 E-value=7.6 Score=16.06 Aligned_cols=20 Identities=30% Similarity=0.524 Sum_probs=15.9
Q ss_pred hhhHHHHHHHHHhhCCCCCE
Q psy10014 14 ELSPEIINCVELTINPPEGI 33 (72)
Q Consensus 14 ~~~Rl~kE~~~l~~~~~~~i 33 (72)
...||.-|+...+.+||.|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 46788889998888888763
No 57
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=37.23 E-value=48 Score=18.65 Aligned_cols=26 Identities=8% Similarity=-0.018 Sum_probs=22.8
Q ss_pred EEEEEECCCCCCCCCcEEEEEEEecC
Q psy10014 46 WEALITGPEGTCFEGGVFPAKDKILL 71 (72)
Q Consensus 46 w~~~i~GP~~tpy~gg~f~~~i~fp~ 71 (72)
+|+.+.|++..+=+|..+.+.+.|-+
T Consensus 82 ~HvML~gl~~~l~~G~~v~ltL~Fe~ 107 (120)
T 2k6w_A 82 YHFMLLGLKRPLKAGEEVELDLLFAG 107 (120)
T ss_dssp EEEEEEEESSCBCTTCEEEEEEEETT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECC
Confidence 68889999888889999999999864
No 58
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=36.69 E-value=54 Score=18.80 Aligned_cols=28 Identities=21% Similarity=0.070 Sum_probs=18.4
Q ss_pred ceEEEEEECCCC----------------CCCCCcEEEEEEEecC
Q psy10014 44 FEWEALITGPEG----------------TCFEGGVFPAKDKILL 71 (72)
Q Consensus 44 ~~w~~~i~GP~~----------------tpy~gg~f~~~i~fp~ 71 (72)
-.+.+.|.||.. +|.+-|.|.+.|.|..
T Consensus 76 g~l~v~I~gPs~~~~~~~d~~dGy~V~YtP~~~G~y~I~Vk~~g 119 (138)
T 2nqc_A 76 GALSVTIDGPSKVQLDCRECPEGHVVTYTPMAPGNYLIAIKYGG 119 (138)
T ss_dssp CCEEEEEESSSCCEEEEEEETTEEEEEEECCSCEEEEEEEEESS
T ss_pred CcEEEEEECCCCCeeeEEECCCcEEEEEEcCCCEEEEEEEEECC
Confidence 345666777765 4556678888887753
No 59
>3cxj_A Uncharacterized protein; PSI-II, structural genomics structure initiative; 2.80A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=34.80 E-value=75 Score=19.12 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=21.7
Q ss_pred HHHHHHHhhCCCCCEEEeecCCCCcceEEEEEECCCC
Q psy10014 19 IINCVELTINPPEGIIAGPVNEENFFEWEALITGPEG 55 (72)
Q Consensus 19 ~kE~~~l~~~~~~~i~~~~~~~~nl~~w~~~i~GP~~ 55 (72)
..|++.|.. ..|+.+.-+.+.+. .|++.+.-|++
T Consensus 5 ~~~I~~WL~--eeG~~v~~~~~a~a-~fH~~v~~P~~ 38 (165)
T 3cxj_A 5 QEMIKKWLD--EEGFLRMEVPDENA-RFHYVVNYPED 38 (165)
T ss_dssp HHHHHHHHH--HTTCEEEECCCTTE-EEEEEEECSTT
T ss_pred HHHHHHHHH--HcCceEecCCCCCC-ceEEEEeCCCC
Confidence 456666765 34555554444565 89999996665
No 60
>2vqc_A Hypothetical 13.2 kDa protein; winged-helix, crenarchaeal, DNA-binding protein, thermo protein, sulfolobus spindle virus; 2.3A {Sulfolobus virus-like particle SSV1} SCOP: a.4.5.78
Probab=34.17 E-value=61 Score=17.90 Aligned_cols=38 Identities=13% Similarity=0.028 Sum_probs=28.6
Q ss_pred CChhhhhHHHHHHHHHhhCCCCCEEEeecCCCCcceEE
Q psy10014 10 PSRIELSPEIINCVELTINPPEGIIAGPVNEENFFEWE 47 (72)
Q Consensus 10 ~s~~~~~Rl~kE~~~l~~~~~~~i~~~~~~~~nl~~w~ 47 (72)
.|...+-.+++-++.+....|.-|.|..-+..-+++|.
T Consensus 41 is~~sayniqr~l~~ice~hpdecevq~knr~t~fkwi 78 (118)
T 2vqc_A 41 ISVPSAYNIQRALKAICERHPDECEVQYKNRKTTFKWI 78 (118)
T ss_dssp CCHHHHHHHHHHHHHHHHHCTTTEEEEECSSCEEEEEC
T ss_pred eccchHhHHHHHHHHHHhcCCchhheeecchhHHHHHH
Confidence 35566778888899988777888999875555577773
No 61
>2rp4_A Transcription factor P53; DMP53, oligomerization domain, tetramerizaiton domain, nucleus; NMR {Drosophila melanogaster}
Probab=31.70 E-value=32 Score=18.11 Aligned_cols=23 Identities=17% Similarity=0.131 Sum_probs=17.3
Q ss_pred CcceEEEEEECCCCCCCCCcEEEEEEEecC
Q psy10014 42 NFFEWEALITGPEGTCFEGGVFPAKDKILL 71 (72)
Q Consensus 42 nl~~w~~~i~GP~~tpy~gg~f~~~i~fp~ 71 (72)
-..+|+|.-+ .+|-|++.|++|.
T Consensus 8 ~p~dW~VsRt-------~dGdYrL~itcpk 30 (76)
T 2rp4_A 8 SAAEWNVSRT-------PDGDYRLAITCPN 30 (76)
T ss_dssp SSCCCEEECC-------TTTBEEEEEEESC
T ss_pred CCccceeeec-------cCCceEEEEEeCc
Confidence 3567888654 3588999999985
No 62
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=30.05 E-value=41 Score=18.20 Aligned_cols=20 Identities=15% Similarity=-0.215 Sum_probs=16.9
Q ss_pred hhhhHHHHHHHHHhhCCCCC
Q psy10014 13 IELSPEIINCVELTINPPEG 32 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~ 32 (72)
....+|++||+++...+.|-
T Consensus 29 vtl~~L~~DYr~l~G~~iP~ 48 (89)
T 3rco_A 29 VALPRLQGEYRSLTGDWIPF 48 (89)
T ss_dssp EEHHHHHHHHHHHHSSCCCT
T ss_pred CCHHHHHHHHHHHhCCcCCh
Confidence 56889999999999887664
No 63
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=29.15 E-value=11 Score=23.98 Aligned_cols=19 Identities=21% Similarity=0.510 Sum_probs=16.5
Q ss_pred cceEEEEEECCCCCCCCCc
Q psy10014 43 FFEWEALITGPEGTCFEGG 61 (72)
Q Consensus 43 l~~w~~~i~GP~~tpy~gg 61 (72)
-+.|.+.+.|..+|+||.+
T Consensus 220 ~yrFDI~LqG~~eTvf~~~ 238 (238)
T 3t63_M 220 AYRFDIVLRGQRKTHFENC 238 (238)
T ss_dssp EEECCEEECCEEECCSCCC
T ss_pred eEEEEEEEcCCCCccCCcC
Confidence 4789999999999999864
No 64
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=25.64 E-value=78 Score=16.41 Aligned_cols=14 Identities=21% Similarity=-0.088 Sum_probs=8.3
Q ss_pred CCCCcEEEEEEEec
Q psy10014 57 CFEGGVFPAKDKIL 70 (72)
Q Consensus 57 py~gg~f~~~i~fp 70 (72)
|.+-|.|.+.+.+.
T Consensus 69 p~~~G~y~i~V~~~ 82 (96)
T 1v05_A 69 VKEKGDYILIVKWG 82 (96)
T ss_dssp CSSCEEEEEEEEET
T ss_pred eCCCEEEEEEEEEC
Confidence 34456677776653
No 65
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=24.68 E-value=53 Score=15.92 Aligned_cols=15 Identities=13% Similarity=-0.102 Sum_probs=12.0
Q ss_pred hhhhHHHHHHHHHhh
Q psy10014 13 IELSPEIINCVELTI 27 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~ 27 (72)
.-+.||.+|+..|++
T Consensus 6 EEILRLErEIE~Lqr 20 (51)
T 2lw9_A 6 EEILRLEKEIEDLQR 20 (51)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 357899999998875
No 66
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=23.96 E-value=51 Score=13.69 Aligned_cols=15 Identities=7% Similarity=-0.181 Sum_probs=11.8
Q ss_pred hhhhHHHHHHHHHhh
Q psy10014 13 IELSPEIINCVELTI 27 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~ 27 (72)
...+||.+|...|+.
T Consensus 8 anvkrlekevgkleg 22 (28)
T 4dac_A 8 ANVKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhhhhh
Confidence 357899999988864
No 67
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=23.15 E-value=96 Score=16.54 Aligned_cols=14 Identities=14% Similarity=0.028 Sum_probs=8.5
Q ss_pred CCCCcEEEEEEEec
Q psy10014 57 CFEGGVFPAKDKIL 70 (72)
Q Consensus 57 py~gg~f~~~i~fp 70 (72)
|.+-|.|.+.|.+.
T Consensus 75 p~~~G~y~i~V~~~ 88 (108)
T 2dj4_A 75 PSQEGPYMVSVKYA 88 (108)
T ss_dssp CSSCEEEEEEEEES
T ss_pred eCCCeeEEEEEEEC
Confidence 44456777777653
No 68
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=23.04 E-value=39 Score=18.36 Aligned_cols=13 Identities=15% Similarity=-0.023 Sum_probs=10.3
Q ss_pred hhhhHHHHHHHHH
Q psy10014 13 IELSPEIINCVEL 25 (72)
Q Consensus 13 ~~~~Rl~kE~~~l 25 (72)
.-++|++++++-|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 3478999998877
No 69
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=22.89 E-value=65 Score=17.67 Aligned_cols=20 Identities=5% Similarity=-0.230 Sum_probs=16.7
Q ss_pred hhhhHHHHHHHHHhhCCCCC
Q psy10014 13 IELSPEIINCVELTINPPEG 32 (72)
Q Consensus 13 ~~~~Rl~kE~~~l~~~~~~~ 32 (72)
..+.+|.+||+++..++.|-
T Consensus 27 vtl~~L~~dYr~~~G~~iP~ 46 (102)
T 3s93_A 27 LSPQELEKEYLLMVGNHLPL 46 (102)
T ss_dssp BCHHHHHHHHHHHHSSCCCT
T ss_pred cCHHHHHHHHHHHcCCcCCc
Confidence 56889999999999887664
No 70
>1x9l_A CUI-DR1885; copper binding protein, solution ST holo-form, structural proteomics in europe, spine, structur genomics; NMR {Deinococcus radiodurans} SCOP: b.2.10.1 PDB: 2jqa_A
Probab=22.77 E-value=74 Score=18.56 Aligned_cols=26 Identities=12% Similarity=-0.054 Sum_probs=22.4
Q ss_pred EEEEEECCCCCCCCCcEEEEEEEecC
Q psy10014 46 WEALITGPEGTCFEGGVFPAKDKILL 71 (72)
Q Consensus 46 w~~~i~GP~~tpy~gg~f~~~i~fp~ 71 (72)
+|+.+.|.+..+=+|..+.+.+.|-+
T Consensus 107 ~HvML~gL~~~l~~G~~v~lTL~Fe~ 132 (149)
T 1x9l_A 107 DHVMLMGLKRPLKVGETVNITLKATD 132 (149)
T ss_dssp SEEEEEEECSCCCTTEEEEEEECBTT
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEECC
Confidence 58889999888889999999998854
No 71
>2bsj_A Chaperone protein SYCT; type III secretion, effector, YOPT; 1.83A {Yersinia enterocolitica} PDB: 2bho_A 2bsh_A 2bsi_A
Probab=22.43 E-value=74 Score=18.22 Aligned_cols=14 Identities=14% Similarity=0.124 Sum_probs=6.1
Q ss_pred CCCCCCCcEEEEEE
Q psy10014 54 EGTCFEGGVFPAKD 67 (72)
Q Consensus 54 ~~tpy~gg~f~~~i 67 (72)
++++-++|+|.+.|
T Consensus 22 ~~~~~edgiYtlev 35 (133)
T 2bsj_A 22 NHQVNENDVYTFEV 35 (133)
T ss_dssp CCCCCTTCCEEEEE
T ss_pred CCCCCcCceEEEEE
Confidence 33344444444443
No 72
>1dul_A Signal recognition particle protein (fifty-four homolog); protein-RNA complex, double helix, tetraloop, internal loop, SRP, ribonucleoprotein; HET: CCC; 1.80A {Escherichia coli} SCOP: a.36.1.1 PDB: 2xkv_C
Probab=22.07 E-value=34 Score=17.61 Aligned_cols=26 Identities=12% Similarity=0.120 Sum_probs=17.9
Q ss_pred cccccCCCCChhhhhHHHHHHHHHhh
Q psy10014 2 KRIKFYTGPSRIELSPEIINCVELTI 27 (72)
Q Consensus 2 ~~~~~~~~~s~~~~~Rl~kE~~~l~~ 27 (72)
+|+....+.+..-..+|.+.++++.+
T Consensus 39 ~RIA~GSG~~v~eVn~Llkqf~~m~k 64 (69)
T 1dul_A 39 RRIAAGSGMQVQDVNRLLKQFDDMQR 64 (69)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCCCHHHHHHHHHHHHHHHH
Confidence 35555666777777888888877653
No 73
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=21.41 E-value=1.2e+02 Score=16.83 Aligned_cols=14 Identities=7% Similarity=0.031 Sum_probs=7.8
Q ss_pred CCCCcEEEEEEEec
Q psy10014 57 CFEGGVFPAKDKIL 70 (72)
Q Consensus 57 py~gg~f~~~i~fp 70 (72)
|.+-|.|.+.|.|.
T Consensus 75 p~~~G~y~I~V~~~ 88 (124)
T 2dmb_A 75 AAKPGTYVIYVRFG 88 (124)
T ss_dssp CSSCEEEEEEEEES
T ss_pred cCCCEEEEEEEEEC
Confidence 33446666666653
No 74
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=20.58 E-value=99 Score=15.73 Aligned_cols=14 Identities=14% Similarity=-0.047 Sum_probs=8.6
Q ss_pred CCCCcEEEEEEEec
Q psy10014 57 CFEGGVFPAKDKIL 70 (72)
Q Consensus 57 py~gg~f~~~i~fp 70 (72)
|.+.|.|.+.+.+.
T Consensus 62 p~~~G~y~i~V~~~ 75 (89)
T 3cnk_A 62 LKDKGEYTLVVKWG 75 (89)
T ss_dssp CCSCEEEEEEEEET
T ss_pred ECCCccEEEEEEEC
Confidence 44556677777654
No 75
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=20.24 E-value=50 Score=16.91 Aligned_cols=42 Identities=21% Similarity=0.350 Sum_probs=25.2
Q ss_pred CCCEEEeecCCCCcc-eEEEEEE----CCCCCCCCCcEEEEEEEecC
Q psy10014 30 PEGIIAGPVNEENFF-EWEALIT----GPEGTCFEGGVFPAKDKILL 71 (72)
Q Consensus 30 ~~~i~~~~~~~~nl~-~w~~~i~----GP~~tpy~gg~f~~~i~fp~ 71 (72)
.||..|...|.+|++ .+...++ |-..-.||||.|.=-++|+-
T Consensus 3 lPG~~V~V~np~~~Yy~y~G~VQRvsdgkaaVLFEGGnWDKLVTf~L 49 (66)
T 2jz2_A 3 FPGATVRVTNVDDTYYRFEGLVQRVSDGKAAVLFENGNWDKLVTFRL 49 (66)
T ss_dssp CTTCEEEECCTTSTTBTCEEEEEEEETTEEEEEEESSSCEEEEEEES
T ss_pred cCCCEEEEeCCCCcccceeEEEEEecCCcEEEEecCCCceeEEEEEh
Confidence 367677666666654 3344332 22234689999888787763
Done!