Query psy10015
Match_columns 90
No_of_seqs 112 out of 1066
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 15:42:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy10015.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/10015hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 99.8 5.9E-20 2E-24 123.2 7.8 71 1-73 1-79 (165)
2 1ayz_A UBC2, ubiquitin-conjuga 99.8 4.3E-19 1.5E-23 119.8 7.0 70 1-73 1-78 (169)
3 3h8k_A Ubiquitin-conjugating e 99.8 6.8E-19 2.3E-23 117.8 7.4 70 2-73 1-78 (164)
4 1zdn_A Ubiquitin-conjugating e 99.8 1.1E-18 3.7E-23 116.5 7.8 70 1-73 10-87 (158)
5 2aak_A UBC1, ubiquitin conjuga 99.8 7.4E-19 2.5E-23 116.5 7.0 70 1-73 1-78 (152)
6 1yrv_A Ubiquitin-conjugating l 99.8 7.1E-19 2.4E-23 118.8 6.2 69 1-72 20-96 (169)
7 2fo3_A Ubiquitin-conjugating e 99.8 1.1E-18 3.6E-23 112.6 6.2 71 1-75 4-82 (125)
8 2gjd_A Ubiquitin-conjugating e 99.8 9.4E-19 3.2E-23 116.7 6.1 71 1-73 1-83 (157)
9 2c2v_B Ubiquitin-conjugating e 99.8 8.3E-19 2.8E-23 116.6 5.8 70 1-73 2-79 (154)
10 2awf_A Ubiquitin-conjugating e 99.8 1.6E-18 5.5E-23 117.2 7.0 69 3-73 16-92 (172)
11 3rz3_A Ubiquitin-conjugating e 99.7 2.4E-18 8.1E-23 117.3 7.4 71 1-73 3-82 (183)
12 4gpr_A Ubiquitin-conjugating e 99.7 3.8E-18 1.3E-22 113.0 7.6 68 3-73 3-78 (151)
13 2grr_A Ubiquitin-conjugating e 99.7 2E-18 7E-23 115.4 6.2 71 1-73 4-86 (161)
14 2e2c_A Ubiquitin conjugating e 99.7 2.3E-18 7.8E-23 114.6 6.3 70 1-73 6-83 (156)
15 2a7l_A Hypothetical ubiquitin- 99.7 1.3E-18 4.5E-23 114.0 4.8 68 1-72 20-97 (136)
16 2bep_A Ubiquitin-conjugating e 99.7 4.2E-18 1.4E-22 113.6 7.1 70 1-73 5-85 (159)
17 1yh2_A HSPC150 protein similar 99.7 5.3E-18 1.8E-22 114.2 7.6 69 2-73 2-78 (169)
18 1jat_B Ubiquitin-conjugating e 99.7 5.5E-18 1.9E-22 110.9 7.0 70 1-72 2-83 (138)
19 1z2u_A Ubiquitin-conjugating e 99.7 5.9E-18 2E-22 111.9 6.9 69 2-73 2-78 (150)
20 2h2y_A Ubiquitin-conjugating e 99.7 8.2E-18 2.8E-22 109.9 7.3 70 4-76 20-97 (136)
21 3rcz_B SUMO-conjugating enzyme 99.7 4.5E-18 1.5E-22 114.2 6.0 70 2-73 8-89 (163)
22 1i7k_A Ubiquitin-conjugating e 99.7 3.8E-18 1.3E-22 116.2 5.5 70 1-73 27-104 (179)
23 3k9o_A Ubiquitin-conjugating e 99.7 5.3E-18 1.8E-22 116.9 6.2 70 1-73 2-82 (201)
24 2ayv_A Ubiquitin-conjugating e 99.7 1.1E-17 3.8E-22 112.6 7.4 68 3-73 20-95 (166)
25 2c4o_A Ubiquitin-conjugating e 99.7 1.3E-17 4.4E-22 112.1 7.7 68 3-73 18-93 (165)
26 2pwq_A Ubiquitin conjugating e 99.7 1.1E-17 3.8E-22 116.8 7.6 69 2-73 21-97 (216)
27 1fxt_A Ubiquitin-conjugating e 99.7 5.7E-18 1.9E-22 111.9 5.7 67 5-73 2-76 (149)
28 2a4d_A Ubiquitin-conjugating e 99.7 2E-17 6.9E-22 111.0 8.1 69 3-73 24-103 (160)
29 2y9m_A Ubiquitin-conjugating e 99.7 1.4E-17 4.9E-22 112.5 6.6 67 1-69 3-88 (172)
30 1jat_A Ubiquitin-conjugating e 99.7 1.1E-17 3.8E-22 111.1 4.9 67 4-73 5-79 (155)
31 2r0j_A Ubiquitin carrier prote 99.7 1.7E-17 5.7E-22 109.7 5.5 65 6-73 3-75 (149)
32 2q0v_A Ubiquitin-conjugating e 99.7 3.9E-17 1.3E-21 109.1 7.3 66 4-71 21-97 (156)
33 3e46_A Ubiquitin-conjugating e 99.7 3.2E-17 1.1E-21 116.8 7.2 70 1-73 54-134 (253)
34 3bzh_A Ubiquitin-conjugating e 99.7 4.7E-17 1.6E-21 112.0 7.5 67 4-73 48-122 (194)
35 2f4w_A Ubiquitin-conjugating e 99.7 5.5E-17 1.9E-21 111.0 7.3 64 4-70 14-85 (187)
36 1tte_A Ubiquitin-conjugating e 99.7 1.7E-17 5.8E-22 115.8 3.3 68 4-73 2-77 (215)
37 2f4z_A Tgtwinscan_2721 - E2 do 99.7 7.2E-17 2.5E-21 111.0 6.3 67 4-73 32-119 (193)
38 3fn1_B NEDD8-conjugating enzym 99.7 7.3E-17 2.5E-21 108.3 6.1 68 3-73 13-88 (167)
39 4ds2_A Ubiquitin-conjugating e 99.7 1.6E-17 5.5E-22 111.6 2.5 70 1-73 5-96 (167)
40 1wzv_A Ubiquitin-conjugating e 99.7 8.1E-17 2.8E-21 106.9 5.1 67 3-73 3-78 (155)
41 2hlw_A Ubiquitin-conjugating e 99.7 7.5E-17 2.6E-21 109.0 4.9 68 4-73 35-113 (170)
42 1zuo_A Hypothetical protein LO 99.6 5.1E-17 1.8E-21 111.1 3.3 71 1-74 24-117 (186)
43 4ddg_A Ubiquitin-conjugating e 99.6 6.5E-16 2.2E-20 115.6 7.2 68 3-73 2-77 (399)
44 1c4z_D UBCH7, ubiquitin conjug 99.6 1.7E-16 5.9E-21 105.2 3.1 66 5-73 3-76 (154)
45 1y8x_A Ubiquitin-conjugating e 99.6 8.3E-16 2.8E-20 102.7 6.2 66 3-73 5-78 (160)
46 2nvu_C NEDD8-conjugating enzym 99.6 7.2E-16 2.5E-20 104.9 5.8 67 2-73 24-98 (180)
47 2onu_A Ubiquitin-conjugating e 99.6 4.5E-16 1.6E-20 103.3 2.3 64 4-73 2-73 (152)
48 2z5d_A Ubiquitin-conjugating e 99.6 2E-15 6.8E-20 102.8 4.3 66 1-73 20-95 (179)
49 3ceg_A Baculoviral IAP repeat- 99.6 5.4E-15 1.8E-19 108.4 6.4 67 1-70 73-151 (323)
50 3o2u_A NEDD8-conjugating enzym 99.5 7.3E-15 2.5E-19 100.7 5.7 66 3-73 28-107 (190)
51 1yf9_A Ubiquitin carrier prote 99.5 5.2E-15 1.8E-19 99.9 4.8 63 4-73 12-82 (171)
52 2z6o_A UFM1-conjugating enzyme 99.0 2.2E-11 7.4E-16 82.2 -0.8 52 6-64 34-95 (172)
53 3kpa_A Probable ubiquitin fold 96.9 0.00011 3.6E-09 49.0 -0.8 52 6-64 36-97 (168)
54 3r3q_A Suppressor protein STP2 95.3 0.076 2.6E-06 35.2 6.8 58 6-64 30-93 (162)
55 3obq_A Tumor susceptibility ge 93.7 0.099 3.4E-06 34.1 4.5 32 31-64 50-81 (146)
56 3u3c_B Paxillin LD2 peptide; 4 55.2 12 0.0004 16.9 2.3 20 5-24 6-25 (26)
57 2ebk_A RWD domain-containing p 42.8 47 0.0016 19.9 4.5 58 7-65 10-69 (128)
58 2ebm_A RWD domain-containing p 39.3 60 0.0021 19.3 5.6 58 5-65 11-68 (128)
59 1m46_B IQ4, IQ4 motif from MYO 35.9 32 0.0011 15.4 2.1 14 4-17 8-21 (26)
60 1mu5_A Type II DNA topoisomera 33.2 19 0.00065 27.1 1.8 58 5-62 293-361 (471)
61 4dac_A Computationally designe 26.6 54 0.0019 14.9 2.2 14 5-18 9-22 (28)
62 2zbk_B Type 2 DNA topoisomeras 26.4 60 0.002 24.8 3.5 59 4-62 291-360 (530)
63 2rf4_B DNA-directed RNA polyme 25.8 33 0.0011 20.2 1.6 12 5-16 63-74 (87)
64 2wb7_A PT26-6P; extra chromoso 24.3 1.1E+02 0.0037 23.7 4.6 55 8-63 23-78 (526)
65 4fxi_A MRNA interferase RELE; 21.7 88 0.003 18.1 3.0 20 3-22 20-39 (95)
66 1zpw_X Hypothetical protein TT 20.2 1.1E+02 0.0036 17.5 3.1 36 4-45 44-79 (90)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.81 E-value=5.9e-20 Score=123.19 Aligned_cols=71 Identities=37% Similarity=0.579 Sum_probs=61.5
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
||+.+.+||+||+++|+++++++|++.+.+++|+++|++.|.||+ +|+||.|+++| .||++| |.|.||++
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i--~fp~~YP~~PP~v~f~t~i~ 78 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKL--EFPKDYPLSPPKLTFTPSIL 78 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSCCS
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEE--ECCccCCCCCCEEEEeCCCc
Confidence 898899999999999999999999999976679999999999999 89999998887 677665 56777754
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 79 H 79 (165)
T 2ucz_A 79 H 79 (165)
T ss_dssp C
T ss_pred c
Confidence 4
No 2
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.77 E-value=4.3e-19 Score=119.78 Aligned_cols=70 Identities=31% Similarity=0.546 Sum_probs=60.4
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
||+.+.+||+||+++|+++++++|.+.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|+++
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~tpYegG~f~l~i--~fp~~YP~~PP~v~F~t~i~ 77 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASPL-PDNVMVWNAMIIGPADTPYEDGTFRLLL--EFDEEYPNKPPHVKFLSEMF 77 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSCCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEec-CCccccceEEEECCCCCCcCCCEEEEEE--ECcccCCCCCCccccccCCc
Confidence 88889999999999999999999999986 679999999999998 99999998887 666665 57778754
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 78 H 78 (169)
T 1ayz_A 78 H 78 (169)
T ss_dssp C
T ss_pred c
Confidence 4
No 3
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.77 E-value=6.8e-19 Score=117.83 Aligned_cols=70 Identities=57% Similarity=0.935 Sum_probs=60.1
Q ss_pred chHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 2 AGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 2 s~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
|+.|.+||+||+++++++++++|++.+.+++|+++|++.|.||+ ||+||.|+++| .||++| |.|.||++|
T Consensus 1 a~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 78 (164)
T 3h8k_A 1 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAIL--SFPLDYPLSPPKMRFTCEMFH 78 (164)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEECSCCCC
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEE--ECCCCCCCCCCEEEEcCCCcc
Confidence 45689999999999999999999999976669999999999999 89999999887 666665 577777444
No 4
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.77 E-value=1.1e-18 Score=116.48 Aligned_cols=70 Identities=26% Similarity=0.417 Sum_probs=60.8
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
||..+.+||+||+++|+++++++|++.+ +++|+++|+++|.||+ ||+||.|+++| .||++| |.|.||++
T Consensus 10 ~s~~~~~RL~kEl~~l~~~~~~gi~~~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~ 86 (158)
T 1zdn_A 10 LPPHIIRLVYKEVTTLTADPPDGIKVFP-NEEDLTDLQVTIEGPEGTPYAGGLFRMKL--LLGKDFPASPPKGYFLTKIF 86 (158)
T ss_dssp SCHHHHHHHHHHHHHHHHSCCTTEEEEE-CSSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSCCC
T ss_pred cCHHHHHHHHHHHHHHHhCCCCCEEEEE-CCCChhheeEEEECCCCCCccCcEEEEEE--EcCCCCCCCCCEEEeccCcc
Confidence 5677899999999999999999999998 4789999999999999 89999998877 677665 57778854
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 87 H 87 (158)
T 1zdn_A 87 H 87 (158)
T ss_dssp C
T ss_pred c
Confidence 4
No 5
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.77 E-value=7.4e-19 Score=116.46 Aligned_cols=70 Identities=31% Similarity=0.577 Sum_probs=61.0
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
||+.+.+||++|+++|+++++++|.+.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.|+++
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~ 77 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQ-DNNIMLWNAVIFGPDDTPWDGGTFKLSL--QFSEDYPNKPPTVRFVSRMF 77 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSCCC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeC-CCCccEEEEEEeCCCCCCccCCEEEEEE--ECCCCCCCCCCEEEEecCcc
Confidence 88889999999999999999999999985 679999999999998 99999998877 667665 56777744
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 78 H 78 (152)
T 2aak_A 78 H 78 (152)
T ss_dssp C
T ss_pred c
Confidence 4
No 6
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.76 E-value=7.1e-19 Score=118.77 Aligned_cols=69 Identities=29% Similarity=0.479 Sum_probs=60.2
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
|++.+.+||+||+++|+++++++|.+.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|+++
T Consensus 20 M~~~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~V~F~T~i~ 96 (169)
T 1yrv_A 20 MHGRAYLLLHRDFCDLKENNYKGITAKPV-SEDMMEWEVEIEGLQNSVWQGLVFQLTI--HFTSEYNYAPPVVKFITIPF 96 (169)
T ss_dssp GGCHHHHHHHHHHHHHHHHCCTTEEEEEC-STTSCEEEEEEECCTTSTTTTCEEEEEE--ECCTTBTTBCCEEEESSCCC
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccccceeEEECCCCCCccceEEEEEE--ECCccCCCCCCcceecCCCc
Confidence 77788999999999999999999999985 679999999999999 89999998887 666664 57778743
No 7
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.76 E-value=1.1e-18 Score=112.62 Aligned_cols=71 Identities=20% Similarity=0.261 Sum_probs=56.5
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
|+ .+.+||+||+++++++++++|++.+ +++|+++|+++|.||+ +|+||.|+++| .||++| |.|.|+..
T Consensus 4 m~-~a~~RL~kEl~~l~~~~~~~~~~~~-~~~~l~~w~~~i~GP~~tpYegg~f~~~i--~fp~~YP~~PP~v~f~t~i~ 79 (125)
T 2fo3_A 4 MG-NANYRIQKELHNFLNNPPINCTLDV-HPNNIRIWIVKYVGLENTIYANEVYKLKI--IFPDDYPLKPPIVYFLQKPP 79 (125)
T ss_dssp ------CHHHHHHHHHHHSCCTTEEEEE-CTTCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEECSSCC
T ss_pred ch-HHHHHHHHHHHHHHhCCCCCEEEEe-CcchhhhhheEEeCCCCCCcCCCEEEEEE--EcCCCCCCCCCEEEEeCCCC
Confidence 54 4679999999999999999999998 4789999999999999 89999998887 677775 56777742
Q ss_pred CCC
Q psy10015 73 KSP 75 (90)
Q Consensus 73 ~~~ 75 (90)
++|
T Consensus 80 ~HP 82 (125)
T 2fo3_A 80 KHT 82 (125)
T ss_dssp CBT
T ss_pred CCC
Confidence 334
No 8
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.76 E-value=9.4e-19 Score=116.65 Aligned_cols=71 Identities=23% Similarity=0.351 Sum_probs=58.6
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCC----CCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNE----ENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWY 68 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~----~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~ 68 (90)
||+.+.+||+||+++|++++++||.+.+.++ +|+++|+++|.||+ +|+||.|+++| .||++| |.|.
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITV--EYPNEYPSKPPKVKFP 78 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEE--ECCTTTTTSCCEEECC
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEE--EcCCCCCCCCCeeecc
Confidence 8888999999999999999999999988532 48999999999999 89999998887 677665 5677
Q ss_pred cCccC
Q psy10015 69 IPCLK 73 (90)
Q Consensus 69 ~~~~~ 73 (90)
|+.+|
T Consensus 79 t~i~H 83 (157)
T 2gjd_A 79 AGFYH 83 (157)
T ss_dssp TTCCC
T ss_pred CCCcc
Confidence 77443
No 9
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.76 E-value=8.3e-19 Score=116.61 Aligned_cols=70 Identities=26% Similarity=0.366 Sum_probs=60.3
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
||..+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.||++
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~GP~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~ 78 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEPD-ESNARYFHVVIAGPQDSPFEGGTFKLEL--FLPEEYPMAAPKVRFMTKIY 78 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEECSCCC
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEEC-CCchheEEEEEECCCCCCcCCCeEEEEE--EcCCCCCCCCCEEEeecCcc
Confidence 67778899999999999999999999985 679999999999999 89999998877 677665 56777744
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 79 H 79 (154)
T 2c2v_B 79 H 79 (154)
T ss_dssp C
T ss_pred c
Confidence 3
No 10
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.75 E-value=1.6e-18 Score=117.19 Aligned_cols=69 Identities=29% Similarity=0.464 Sum_probs=59.5
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.+.+||+||+++|+++++++|++.+.+++|+++|+++|.||+ +|+||.|+++| .||++| |.|.||++|
T Consensus 16 ~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i--~fp~~YP~~PP~v~F~T~i~H 92 (172)
T 2awf_A 16 PRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHL--TFPKDYPLRPPKMKFITEIWH 92 (172)
T ss_dssp CTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEECSCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEE--ECCcccCCCCCcccccCCCcc
Confidence 4678999999999999999999999876679999999999999 99999998887 677665 577777543
No 11
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.75 E-value=2.4e-18 Score=117.30 Aligned_cols=71 Identities=28% Similarity=0.390 Sum_probs=59.3
Q ss_pred Cc-hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCc
Q psy10015 1 MA-GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPC 71 (90)
Q Consensus 1 Ms-~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~ 71 (90)
|+ +.+.+||+||+++|+++++++|++.+.+++|+++|++.|.||+ +|+||.|+++| .||++| |.|.||+
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i 80 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARL--KFPIDYPYSPPAFRFLTKM 80 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEESSCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEE--ECCCCCCCCCCeeEecCCC
Confidence 44 4688999999999999999999999656789999999999999 89999998887 677765 5677775
Q ss_pred cC
Q psy10015 72 LK 73 (90)
Q Consensus 72 ~~ 73 (90)
+|
T Consensus 81 ~H 82 (183)
T 3rz3_A 81 WH 82 (183)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 12
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.74 E-value=3.8e-18 Score=113.01 Aligned_cols=68 Identities=29% Similarity=0.547 Sum_probs=59.0
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.|.+||+||+++++++++++|++.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.||++|
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDPPCNCSAGPV-GDDIFHWTATITGPDDSPYQGGLFFLDV--HFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCSSSTTTTCEEEEEE--ECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCceEEEEEEeCCCCCCcCCCEEEEEE--ECCCCCCCCcceeEEecCccc
Confidence 468899999999999999999999995 679999999999999 89999998887 666665 577777554
No 13
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.74 E-value=2e-18 Score=115.43 Aligned_cols=71 Identities=32% Similarity=0.520 Sum_probs=60.2
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecC----CCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVN----EENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWY 68 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~----~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~ 68 (90)
||+.+.+||+||+++|+++++++|.+.+.. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.
T Consensus 4 M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 4 MSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRM--LFKDDYPSSPPKCKFE 81 (161)
T ss_dssp CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEES
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEE--EcCcccCCCCCEEEEe
Confidence 787889999999999999999999998752 358999999999999 89999998877 677665 5677
Q ss_pred cCccC
Q psy10015 69 IPCLK 73 (90)
Q Consensus 69 ~~~~~ 73 (90)
||++|
T Consensus 82 t~i~H 86 (161)
T 2grr_A 82 PPLFH 86 (161)
T ss_dssp SCCCS
T ss_pred cCccc
Confidence 77544
No 14
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.74 E-value=2.3e-18 Score=114.61 Aligned_cols=70 Identities=31% Similarity=0.546 Sum_probs=59.6
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
|++.+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.||++
T Consensus 6 ~~~~~~~RL~kEl~~l~~~~~~~i~~~p~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~ 82 (156)
T 2e2c_A 6 ERHSVSKRLQQELRTLLMSGDPGITAFPD-GDNLFKWVATLDGPKDTVYESLKYKLTL--EFPSDYPYKPPVVKFTTPCW 82 (156)
T ss_dssp SCCCHHHHHHHHHHHHHHHCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEESSCCC
T ss_pred cchHHHHHHHHHHHHHHhCCCCCEEEEEC-CCCccEEEEEEECCCCCCcCCcEEEEEE--ECCCCCCCCCCEEEEeCCcc
Confidence 34568899999999999999999999985 679999999999999 89999998877 666665 57777765
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 83 H 83 (156)
T 2e2c_A 83 H 83 (156)
T ss_dssp B
T ss_pred c
Confidence 4
No 15
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.74 E-value=1.3e-18 Score=113.95 Aligned_cols=68 Identities=26% Similarity=0.366 Sum_probs=56.7
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEe--ecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccC
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAG--PVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIP 70 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~--p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~ 70 (90)
||+. ++||+||+++++++++++|++. + +++|+++|++.|.||+ ||+||.|+++| .||++| |.|.||
T Consensus 20 Ms~~-~~RL~kEl~~l~~~~~~gi~v~~~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~v~F~T~ 95 (136)
T 2a7l_A 20 MASM-QKRLQKELLALQNDPPPGMTLNEKS-VQNSITQWIVDMEGAPGTLYEGEKFQLLF--KFSSRYPFDSPQVMFTGE 95 (136)
T ss_dssp GTTS-CHHHHHHHHHHHHSCCTTCCCCTTC-CCCSCEEEEEEEECCTTSTTTTCEEEEEE--EECTTTTTSCCEEEEESS
T ss_pred ccHH-HHHHHHHHHHHHhCCCCCEEEEEee-CccccceeEEEEECCCCCccccEEEEEEE--ECCCCCCCCCCEEEEeCC
Confidence 5543 4999999999999999999864 5 4779999999999999 89999998887 677665 567777
Q ss_pred cc
Q psy10015 71 CL 72 (90)
Q Consensus 71 ~~ 72 (90)
++
T Consensus 96 i~ 97 (136)
T 2a7l_A 96 NI 97 (136)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 16
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.74 E-value=4.2e-18 Score=113.64 Aligned_cols=70 Identities=24% Similarity=0.318 Sum_probs=59.2
Q ss_pred CchHHHHHHHHHHHHhhhC---CCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------ccccc
Q psy10015 1 MAGSALRRLMAEYKQLTIN---PPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYI 69 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~---~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~ 69 (90)
||+.+.+||+||+++|+++ ++++|++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|
T Consensus 5 Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t 81 (159)
T 2bep_A 5 MANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEI--KIPETYPFNPPKVRFIT 81 (159)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-SSSSSEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEESS
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEE--eCCCcCCCCCCEEEeeC
Confidence 6777899999999999985 5789999985 579999999999999 89999998877 677665 57777
Q ss_pred CccC
Q psy10015 70 PCLK 73 (90)
Q Consensus 70 ~~~~ 73 (90)
|++|
T Consensus 82 ~i~H 85 (159)
T 2bep_A 82 KIWH 85 (159)
T ss_dssp CCCB
T ss_pred CCCc
Confidence 7544
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.74 E-value=5.3e-18 Score=114.25 Aligned_cols=69 Identities=23% Similarity=0.315 Sum_probs=59.3
Q ss_pred chHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 2 AGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 2 s~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
|+.+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.||++|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~~l~~w~~~I~GP~~tpYegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 78 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQD-KDQMDDLRAQILGGANTPYEKGVFKLEV--IIPERYPFEPPQIRFLTPIYH 78 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEESSCCCB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEeC-CCchheEEEEEECCCCCCccCCEEEEEE--EeCCCCCCCCcEEEeecCCcc
Confidence 4568899999999999999999999984 679999999999998 99999998887 677665 567777544
No 18
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.73 E-value=5.5e-18 Score=110.86 Aligned_cols=70 Identities=17% Similarity=0.189 Sum_probs=54.5
Q ss_pred Cch-HHHHHHHHHHHHhhhC-CCCCEEEeecCCC--CceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccc
Q psy10015 1 MAG-SALRRLMAEYKQLTIN-PPEGIIAGPVNEE--NFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWY 68 (90)
Q Consensus 1 Ms~-~a~rRL~kEl~~l~~~-~~~~i~~~p~~~~--nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~ 68 (90)
||+ .+.+||+||+++++++ ++++|++.+.+++ |+++|+++|.||+ +|+||.|+++| .||++| |.|.
T Consensus 2 m~~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~ 79 (138)
T 1jat_B 2 MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSI--DCGPNYPDSPPKVTFI 79 (138)
T ss_dssp -CCCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEE--ECCTTTTTSCCEEEES
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEE--ECCCCCCCCCCceEEE
Confidence 664 5678999999999998 7899999886433 5999999999999 89999998887 677665 5677
Q ss_pred cCcc
Q psy10015 69 IPCL 72 (90)
Q Consensus 69 ~~~~ 72 (90)
|+++
T Consensus 80 t~i~ 83 (138)
T 1jat_B 80 SKIN 83 (138)
T ss_dssp BCCC
T ss_pred cccc
Confidence 7743
No 19
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.73 E-value=5.9e-18 Score=111.91 Aligned_cols=69 Identities=29% Similarity=0.521 Sum_probs=58.7
Q ss_pred chHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 2 AGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 2 s~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
|..+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.||++|
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 78 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGPV-GDDLFHWQATIMGPPESPYQGGVFFLTI--HFPTDYPFKPPKVAFTTRIYH 78 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEESSCCCB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEC-CCcceEEEEEEECCCCCCcCCCEEEEEE--ECCCCCCCCCcEEEEecCccc
Confidence 3457899999999999999999999985 579999999999999 89999998887 677665 567777443
No 20
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.73 E-value=8.2e-18 Score=109.93 Aligned_cols=70 Identities=17% Similarity=0.227 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccCCC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLKSP 75 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~~~ 75 (90)
.+.+||+||+++++++++++|.+.+. ++|+++|++.|.||+ +|+||.|+++| .||++| |.|.|+..++|
T Consensus 20 ~~~~RL~kEl~~l~~~~~~~~~~~~~-~~nl~~W~~~I~GP~~tpYegg~f~~~i--~fp~~YP~~PP~v~f~t~i~~HP 96 (136)
T 2h2y_A 20 NANYRIQKELNNFLKNPPINCTIDVH-PSNIRIWIVQYVGLENTIYANEVYKIKI--IFPDNYPLKPPIVYFLQKPPKHT 96 (136)
T ss_dssp SHHHHHHHHHHHHHHSCCTTEEEEEC-TTCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEECSSCCCCT
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEec-cccccccEEEEECCCCCceeCCEEEEEE--EeCCCCCCCCCEEEEeCCCCCCC
Confidence 47899999999999999999999984 689999999999999 89999998887 677665 57778753444
Q ss_pred c
Q psy10015 76 S 76 (90)
Q Consensus 76 ~ 76 (90)
+
T Consensus 97 n 97 (136)
T 2h2y_A 97 H 97 (136)
T ss_dssp T
T ss_pred c
Confidence 4
No 21
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.73 E-value=4.5e-18 Score=114.19 Aligned_cols=70 Identities=23% Similarity=0.389 Sum_probs=58.4
Q ss_pred chHHHHHHHHHHHHhhhCCCCCEEEeecCC-C---CceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------ccccc
Q psy10015 2 AGSALRRLMAEYKQLTINPPEGIIAGPVNE-E---NFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYI 69 (90)
Q Consensus 2 s~~a~rRL~kEl~~l~~~~~~~i~~~p~~~-~---nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~ 69 (90)
|..|.+||+||+++|++++++||.+.+.++ | |+++|+++|.||+ ||+||.|+++| .||++| |.|.|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i--~fp~~YP~~pP~v~F~t 85 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTM--AFPEEYPTRPPKCRFTP 85 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESS
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEE--ECCCCCCCCCCEEEEeC
Confidence 346899999999999999999999998633 2 8999999999999 89999999887 666664 57778
Q ss_pred CccC
Q psy10015 70 PCLK 73 (90)
Q Consensus 70 ~~~~ 73 (90)
+++|
T Consensus 86 ~i~H 89 (163)
T 3rcz_B 86 PLFH 89 (163)
T ss_dssp CCCS
T ss_pred CCcc
Confidence 7443
No 22
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.72 E-value=3.8e-18 Score=116.19 Aligned_cols=70 Identities=31% Similarity=0.582 Sum_probs=58.6
Q ss_pred CchHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
|++.+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.||++
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~V~F~T~i~ 103 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFPE-SDNLFKWVGTIHGAAGTVYEDLRYKLSL--EFPSGYPYNAPTVKFLTPCY 103 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEEE-TTEEEEEEEEEEBCTTSTTBTCEEEEEE--ECCTTTTTSCCEEEESSCCC
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcccccEEEEECCCCCCcCCCEEEEEE--ECCCcCCCCCceEEEecCCc
Confidence 46678899999999999999999999985 679999999999999 89999998887 677665 57778855
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 104 H 104 (179)
T 1i7k_A 104 H 104 (179)
T ss_dssp S
T ss_pred c
Confidence 4
No 23
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.72 E-value=5.3e-18 Score=116.88 Aligned_cols=70 Identities=24% Similarity=0.318 Sum_probs=58.1
Q ss_pred CchHHHHHHHHHHHHhhhC---CCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------ccccc
Q psy10015 1 MAGSALRRLMAEYKQLTIN---PPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYI 69 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~---~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~ 69 (90)
||+.+.+||+||+++|+++ ++.+|++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~pP~v~f~t 78 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEI--KIPETYPFNPPKVRFIT 78 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESS
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCCccEEEEEEECCCCCCCCCCEEEEEE--ECCCcCCCCCCcccccc
Confidence 8888999999999999987 3689999996 679999999999999 99999998887 666665 57778
Q ss_pred CccC
Q psy10015 70 PCLK 73 (90)
Q Consensus 70 ~~~~ 73 (90)
+++|
T Consensus 79 ~i~H 82 (201)
T 3k9o_A 79 KIWH 82 (201)
T ss_dssp CCCB
T ss_pred Cccc
Confidence 7544
No 24
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.72 E-value=1.1e-17 Score=112.59 Aligned_cols=68 Identities=31% Similarity=0.562 Sum_probs=58.4
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.||++|
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~V~F~T~i~H 95 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPV-GDDMFHWQATIMGPEDSPYSGGVFFLNI--HFPSDYPFKPPKVNFTTKIYH 95 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeeEEEECCCCCCcCCCEEEEEE--eCCCcCCCCCceeeeccCCcC
Confidence 457899999999999999999999995 679999999999999 99999998887 666665 567777544
No 25
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.72 E-value=1.3e-17 Score=112.12 Aligned_cols=68 Identities=29% Similarity=0.540 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.||++|
T Consensus 18 ~~~~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegg~f~l~i--~fp~~YP~~PP~v~F~T~i~H 93 (165)
T 2c4o_A 18 SMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTI--HFPTDYPFKPPKVAFTTRIYH 93 (165)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCCcceeEEEEECCCCCCccCceEEEEE--ECCCcCCCCCCEEEEecCCcC
Confidence 457899999999999999999999995 679999999999999 89999998887 677765 567777443
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.72 E-value=1.1e-17 Score=116.80 Aligned_cols=69 Identities=26% Similarity=0.360 Sum_probs=59.2
Q ss_pred chHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 2 AGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 2 s~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
++.+.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|+++|
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAHIK-DSNFFEWVGFIKGPEGTPYEGGHFTLAI--TIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEEEC-SSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEESSCCCB
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCccceEEEEEE--ECCCcCCCCCCcccccCCCcC
Confidence 4568899999999999999999999995 679999999999999 99999998887 666665 577777443
No 27
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.72 E-value=5.7e-18 Score=111.88 Aligned_cols=67 Identities=16% Similarity=0.214 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 5 ALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 5 a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.+||+||+++++++++++|++.+.+++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|+++|
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 76 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDI--EVPMEYPFKPPKMQFDTKVYH 76 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEE--ECCTTTTSSCCEEEESSCCCB
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEE--ECCCCCCCCCCEEEEeCCCcc
Confidence 46999999999999999999999975559999999999998 89999998887 677665 577777544
No 28
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.72 E-value=2e-17 Score=110.96 Aligned_cols=69 Identities=17% Similarity=0.250 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHhhhCCCCC-EEEeecCCCC--ceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCc
Q psy10015 3 GSALRRLMAEYKQLTINPPEG-IIAGPVNEEN--FFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPC 71 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~-i~~~p~~~~n--l~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~ 71 (90)
..+.+||+||+++++++++++ +++.+.+++| +++|+++|.||+ +|+||.|+++| .||++| |.|.||+
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~v~F~T~i 101 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKI--ECGPKYPEAPPFVRFVTKI 101 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESBCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEE--ECCCcCCCCCcEEEEecCc
Confidence 457899999999999998888 7888755554 999999999998 89999998887 677665 5777885
Q ss_pred cC
Q psy10015 72 LK 73 (90)
Q Consensus 72 ~~ 73 (90)
+|
T Consensus 102 ~H 103 (160)
T 2a4d_A 102 NM 103 (160)
T ss_dssp CC
T ss_pred ee
Confidence 44
No 29
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.71 E-value=1.4e-17 Score=112.47 Aligned_cols=67 Identities=25% Similarity=0.435 Sum_probs=54.5
Q ss_pred CchHHHHHHHHHHHHhhh-C-C------CC---CEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC---
Q psy10015 1 MAGSALRRLMAEYKQLTI-N-P------PE---GIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN--- 64 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~-~-~------~~---~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~--- 64 (90)
||+.+.+||+||+++|++ + + +. ++.+.+++++|+++|+++|.||+ ||+||.|+++| .||++|
T Consensus 3 Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i--~fp~~YP~~ 80 (172)
T 2y9m_A 3 MADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILI--EVPSSYPMN 80 (172)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTS
T ss_pred CcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEE--ECCCcCCCC
Confidence 777899999999999998 4 3 33 46677755789999999999999 89999998887 677665
Q ss_pred ---ccccc
Q psy10015 65 ---SGWYI 69 (90)
Q Consensus 65 ---~~~~~ 69 (90)
|.|.|
T Consensus 81 PP~v~f~t 88 (172)
T 2y9m_A 81 PPKISFMQ 88 (172)
T ss_dssp CCEEEECT
T ss_pred CCEEEEee
Confidence 57777
No 30
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.70 E-value=1.1e-17 Score=111.15 Aligned_cols=67 Identities=25% Similarity=0.413 Sum_probs=57.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
.+.+||+||+++|+++++++|++.+. ++|+++|++.|.||+ +|+||.|+++| .||++| |.|.||++|
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~-~~~l~~w~~~I~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 79 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPH-DDNLRYFQVTIEGPEQSPYEDGIFELEL--YLPDDYPMEAPKVRFLTKIYH 79 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTEEEEEEE--ECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEC-CCchhEEEEEEECCCCCCccCcEEEEEE--EcCCCCCCCCCcceeeccccc
Confidence 46799999999999999999999985 679999999999999 89999998887 666665 567777444
No 31
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.70 E-value=1.7e-17 Score=109.71 Aligned_cols=65 Identities=32% Similarity=0.536 Sum_probs=56.5
Q ss_pred HHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 6 LRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 6 ~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
.+||+||+++|+++++++|++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.||.+|
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 75 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVPV-PENYRHFNILINGPDGTPYEGGTYKLEL--FLPEQYPMEPPKVRFLTKIYH 75 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEECSCCCB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEE--eCCcccCCCCCeeEeccCCcc
Confidence 589999999999999999999985 679999999999999 89999998887 666665 577777544
No 32
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.70 E-value=3.9e-17 Score=109.06 Aligned_cols=66 Identities=18% Similarity=0.310 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhhhC-CCCCEEEeecCCC--CceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCc
Q psy10015 4 SALRRLMAEYKQLTIN-PPEGIIAGPVNEE--NFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPC 71 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~-~~~~i~~~p~~~~--nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~ 71 (90)
.+.+||+||+++++++ ++++|++.+.+++ |+++|+++|.||+ ||+||.|+++| .||++| |.|.||+
T Consensus 21 ~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~v~F~t~i 97 (156)
T 2q0v_A 21 PRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTI--FCDDNYPDSPPTVKFDTKI 97 (156)
T ss_dssp CHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESBCC
T ss_pred hHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEE--ECCCcCCCCCCeEEEEccc
Confidence 4679999999999998 7899999886433 6999999999999 89999998887 677765 5677764
No 33
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.69 E-value=3.2e-17 Score=116.80 Aligned_cols=70 Identities=24% Similarity=0.318 Sum_probs=59.7
Q ss_pred CchHHHHHHHHHHHHhhhC---CCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------ccccc
Q psy10015 1 MAGSALRRLMAEYKQLTIN---PPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYI 69 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~---~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~ 69 (90)
||+.+.+||+||+++|+++ ++.+|++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|
T Consensus 54 Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~-~dnl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~V~F~T 130 (253)
T 3e46_A 54 MANIAVQRIKREFKEVLKSEETSKNQIKVDLV-DENFTELRGEIAGPPDTPYEGGRYQLEI--KIPETYPFNPPKVRFIT 130 (253)
T ss_dssp CCHHHHHHHHHHHHHHHHCHHHHTTSEEEEEC-STTSSEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEESS
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCCEEEEEC-CCcccEEEEEEECCCCCCcCCCEEEEEE--ECCCCCCCCCCeeeecC
Confidence 6778999999999999987 4789999996 679999999999999 99999998887 666665 57778
Q ss_pred CccC
Q psy10015 70 PCLK 73 (90)
Q Consensus 70 ~~~~ 73 (90)
+++|
T Consensus 131 ~i~H 134 (253)
T 3e46_A 131 KIWH 134 (253)
T ss_dssp CCCB
T ss_pred CCcc
Confidence 7544
No 34
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.69 E-value=4.7e-17 Score=111.97 Aligned_cols=67 Identities=27% Similarity=0.538 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
.+.+||++|+++|+++++++|.+.+. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.|+++|
T Consensus 48 ~a~~RL~kEl~~l~~~~~~gi~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~V~F~T~i~H 122 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPNCSAGPK-GDNIYEWRSTILGPPGSVYEGGVFFLDI--TFTPEYPFKPPKVTFRTRIYH 122 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEES-SSCTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHHHhCCCCCceeecc-cCccccceEEEeCCCCCCccCCEEEEEE--ECCCcCCCCCccccccCCCcc
Confidence 47899999999999999999999985 679999999999999 89999998887 666665 577777544
No 35
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.69 E-value=5.5e-17 Score=110.99 Aligned_cols=64 Identities=27% Similarity=0.435 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIP 70 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~ 70 (90)
.+.+||+||+++|+++++++|.+.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.||
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~-~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPL-PSNILEWHYVVRGPEMTPYEGGYYHGKL--IFPREFPFKPPSIYMITP 85 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTSSCCEEEECSC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEc-CCccceeEEEEeCCCCCCCCCCEEEEEE--EcCCCCCCCCCcccccCC
Confidence 47899999999999999999999985 679999999999999 89999998887 677665 567776
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.67 E-value=1.7e-17 Score=115.81 Aligned_cols=68 Identities=18% Similarity=0.222 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
.+.+||+||+++|+++++++|++.+.+++++++|+++|.||+ ||+||.|+++| .||++| |.|.|+++|
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i--~fP~~YP~~PP~V~F~T~i~H 77 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDI--EVPMEYPFKPPKMQFDTKVYH 77 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEE--ECCSCSSSCCCEEEETTTCCC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEE--eCCccCCCCCCcccccCCCcc
Confidence 367999999999999999999999975556789999999999 99999998887 566665 577777443
No 37
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.67 E-value=7.2e-17 Score=111.03 Aligned_cols=67 Identities=19% Similarity=0.308 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhhCCC-------------CCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC----
Q psy10015 4 SALRRLMAEYKQLTINPP-------------EGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN---- 64 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~-------------~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~---- 64 (90)
.+.+||+||+++|+++++ .+|.+.+. ++|+++|+++|.||+ ||+||.|+++| .||++|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~-~~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~P 108 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIV-GGDIHRWRGFIAGPLGTPYEGGHFTLDI--VIPPDYPYNP 108 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSC
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEc-CCCcceEEEEEeCCCCCCcCCCEEEEEE--ECCCcCCCCC
Confidence 467899999999999887 79999986 579999999999998 89999998887 677665
Q ss_pred --cccccCccC
Q psy10015 65 --SGWYIPCLK 73 (90)
Q Consensus 65 --~~~~~~~~~ 73 (90)
|.|.||++|
T Consensus 109 P~V~F~T~i~H 119 (193)
T 2f4z_A 109 PKMKFVTKIWH 119 (193)
T ss_dssp CEEEESSCCCB
T ss_pred CeEEEecCCcc
Confidence 577776443
No 38
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.67 E-value=7.3e-17 Score=108.27 Aligned_cols=68 Identities=10% Similarity=0.049 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.+.+||+||+++|+++++++|++.+.+++|+++|++.| ||+ ||+||.|+++| .||++| |.|.||++|
T Consensus 13 s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i--~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 13 SVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFET--EVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEE--ECCTTBTTBCCEEEECSCCCC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEE--ECCCCCCCCCCeeEecCCccc
Confidence 357899999999999999999999876678999999999 777 99999999887 566654 578888554
No 39
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.66 E-value=1.6e-17 Score=111.64 Aligned_cols=70 Identities=16% Similarity=0.306 Sum_probs=60.0
Q ss_pred CchHHHHHHHHHHHHhhhCC------------CCCEEEeecCCCCceEEEEEEeccC--CCC--CCeEEEEEEEEecCCC
Q psy10015 1 MAGSALRRLMAEYKQLTINP------------PEGIIAGPVNEENFFEWEALITGNK--LYE--WMPFALNLCYFFSKGN 64 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~------------~~~i~~~p~~~~nl~~w~~~I~GP~--~Ye--gg~f~l~i~i~f~~~~ 64 (90)
||+.+.+||+||+++|++++ +.+|.+.+. ++|+++|+++|.||+ +|+ ||.|+++| .||++|
T Consensus 5 Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i--~fp~~Y 81 (167)
T 4ds2_A 5 MKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVD-TDTIYNWILKVKAPADSVYGGAGNTYQLSV--LFSDDY 81 (167)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEE-ESSTTEEEEEEECCTTSGGGTTCCEEEEEE--ECCTTT
T ss_pred ccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeC-CCcccEEEEEEECCCCCCccCCCCEEEEEE--ECCCCC
Confidence 88888999999999999877 678998884 679999999999999 899 99998887 666665
Q ss_pred ------cccccCccC
Q psy10015 65 ------SGWYIPCLK 73 (90)
Q Consensus 65 ------~~~~~~~~~ 73 (90)
|.|.||++|
T Consensus 82 P~~pP~v~f~t~i~H 96 (167)
T 4ds2_A 82 PHEPPTVRFVTPVYS 96 (167)
T ss_dssp TTSCCEEEESSCCCC
T ss_pred CCCCCEEEEeCCccc
Confidence 577888655
No 40
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.66 E-value=8.1e-17 Score=106.92 Aligned_cols=67 Identities=21% Similarity=0.356 Sum_probs=55.9
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEE-eecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIA-GPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~-~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
..+.+||+||+++|+++++++|.+ .+ +++|+++|+++|. |+ +|+||.|+++| .||++| |.|.||++|
T Consensus 3 m~~~~RL~kEl~~l~~~~~~~i~~~~~-~~~~l~~w~~~I~-P~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 3 HMASMRVVKELEDLQKKPPPYLRNLSS-DDANVLVWHALLL-PDQPPYHLKAFNLRI--SFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp --CHHHHHHHHHHHHHSCCTTEEEEEE-CSSCTTEEEEEEC-CCSTTGGGEEEEEEE--ECCTTTTSSCCEEEESSCCCB
T ss_pred chHHHHHHHHHHHHHhCCCCCEEEEec-CCCchheEEEEEc-CCCCCCCCCEEEEEE--ECCCCCCCCCCcceeeCCCcc
Confidence 347899999999999999999999 55 5789999999999 88 89999998887 677665 577787554
No 41
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.65 E-value=7.5e-17 Score=109.02 Aligned_cols=68 Identities=18% Similarity=0.270 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhhhCCCCC-EEEeecCCCC--ceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCcc
Q psy10015 4 SALRRLMAEYKQLTINPPEG-IIAGPVNEEN--FFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCL 72 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~-i~~~p~~~~n--l~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~ 72 (90)
.+.+||+||+++|+++++++ +++.+.+++| +++|+++|.||+ +|+||.|+++| .||++| |.|.||++
T Consensus 35 p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i--~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKI--ECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEE--ECCSSCTTSCCEEEECBCCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEE--ECCCCCCCCCCeeEEecccc
Confidence 46899999999999998888 7787755554 999999999998 89999998887 666665 57888865
Q ss_pred C
Q psy10015 73 K 73 (90)
Q Consensus 73 ~ 73 (90)
|
T Consensus 113 H 113 (170)
T 2hlw_A 113 M 113 (170)
T ss_dssp C
T ss_pred c
Confidence 4
No 42
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.65 E-value=5.1e-17 Score=111.13 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=60.0
Q ss_pred CchHHHHHHHHHHHHhhhCC---CCCEEEeecCCCCceEEEEEEecc-C--CCCC-----------CeEEEEEEEEecCC
Q psy10015 1 MAGSALRRLMAEYKQLTINP---PEGIIAGPVNEENFFEWEALITGN-K--LYEW-----------MPFALNLCYFFSKG 63 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~---~~~i~~~p~~~~nl~~w~~~I~GP-~--~Yeg-----------g~f~l~i~i~f~~~ 63 (90)
||+.+.+||+||+++|++++ +.+|++.+. ++|+++|+++|.|| + ||+| |.|+++| .||++
T Consensus 24 ~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~-~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i--~fp~~ 100 (186)
T 1zuo_A 24 GSVQASDRLMKELRDIYRSQSYKTGIYSVELI-NDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNF--SFKDN 100 (186)
T ss_dssp CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEEE-TTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEE--ECCTT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEc-CCccceeEEEEECCCCCCCccccchhhccccCceEEEEEE--ECCCC
Confidence 67788999999999999988 688999986 57999999999997 4 7988 8998887 66666
Q ss_pred C------cccccCccCC
Q psy10015 64 N------SGWYIPCLKS 74 (90)
Q Consensus 64 ~------~~~~~~~~~~ 74 (90)
| |.|.||++|+
T Consensus 101 YP~~PP~V~f~tpi~hP 117 (186)
T 1zuo_A 101 FPFDPPFVRVVLPVLSG 117 (186)
T ss_dssp TTSSCCEEEEEESCEES
T ss_pred CCCCCCeEEEeCCccCC
Confidence 5 6788887764
No 43
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.62 E-value=6.5e-16 Score=115.56 Aligned_cols=68 Identities=29% Similarity=0.541 Sum_probs=58.9
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.|.+||+||+++|+++++++|++.|. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.||++|
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~-~~nl~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPV-GDDMFHWQATIMGPNDSPYQGGVFFLTI--HFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEE-TTEEEEEEEEEECCTTSSSTTCEEEEEE--ECCSSTTTSCCEEEESSCCCC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEc-CCcceEEEEEEECCCCCCCCCCEEEEEE--ECCcccCCCCcEEEeeccccc
Confidence 457899999999999999999999996 679999999999999 99999999887 666654 577788544
No 44
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.61 E-value=1.7e-16 Score=105.24 Aligned_cols=66 Identities=23% Similarity=0.344 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 5 ALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 5 a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.+||+||+++|++++++++.+.+.+++|+++|++.|. |+ ||+||.|+++| .||++| |.|.||++|
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 76 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEI--NFPAEYPFKPPKITFKTKIYH 76 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEE--ECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEE--EeCCCCCCCCCEEEEeCCCcc
Confidence 56899999999999999999877656789999999998 77 89999998877 677665 577787554
No 45
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.61 E-value=8.3e-16 Score=102.74 Aligned_cols=66 Identities=14% Similarity=0.222 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
+.+.+||+||+++| +++++|++...+++|+++|+++| ||+ +|+||.|+++| .||++| |.|.||++|
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~t~i~H 78 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSF--KVGQGYPHDPPKVKCETMVYH 78 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEE--ECCTTTTTSCCEEEECSCCCB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEE--eCCCcCCCCCCEEEEecCCcc
Confidence 35789999999999 57889999832578999999988 888 89999998887 677665 577787554
No 46
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.61 E-value=7.2e-16 Score=104.91 Aligned_cols=67 Identities=15% Similarity=0.231 Sum_probs=54.6
Q ss_pred chHHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 2 AGSALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 2 s~~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
++.+.+||+||+++| +++++|++...+++|+++|+++| ||+ ||+||.|+++| .||++| |.|.||++|
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i--~fp~~YP~~PP~v~F~t~i~H 98 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSF--KVGQGYPHDPPKVKCETMVYH 98 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEE--ECCTTTTTSCCEEEECSCCCB
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEE--eCCCcCCCCCCcCceeccCcc
Confidence 346789999999999 57889999833578999999998 888 89999998877 677665 577777544
No 47
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.58 E-value=4.5e-16 Score=103.27 Aligned_cols=64 Identities=14% Similarity=0.261 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
++.+||+||+++++++ ++++.+. ++|+++|+++|.||+ ||+||.|+++| .||++| |.|.|+++|
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~~-~~~l~~w~~~i~Gp~~tpyegg~f~~~i--~fp~~YP~~pP~v~f~t~i~H 73 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLELN-NGSTQDFDVMFHGPNGTAYEGGIWKVHV--TLPDDYPFASPSIGFMNKLLH 73 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEEE-TTEEEEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSCCCC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEEc-cCccceEEEEEECCCCCcccceEEEEEE--cCcccCCCCCCeEEEecCCcc
Confidence 3568999999999874 6788885 679999999999999 89999998887 677665 577787443
No 48
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.56 E-value=2e-15 Score=102.80 Aligned_cols=66 Identities=14% Similarity=0.132 Sum_probs=51.6
Q ss_pred Cch--HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccC
Q psy10015 1 MAG--SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIP 70 (90)
Q Consensus 1 Ms~--~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~ 70 (90)
||+ .+.+||+||+++|+. ++|++.+. +|+++|+++|.||+ ||+||.|+++| .||++| |.|.|+
T Consensus 20 ms~~~~a~~RL~kEl~~l~~---~g~~v~~~--ddl~~W~~~I~GP~~tpYegG~f~l~i--~fp~~YP~~PP~V~F~t~ 92 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIE---SKHEVTIL--GGLNEFVVKFYGPQGTPYEGGVWKVRV--DLPDKYPFKSPSIGFMNK 92 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHH---SSSCEEEE--EETTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSC
T ss_pred CCCchHHHHHHHHHHHhcCc---CCCEEEEC--CCCceeEEEEECCCCCCccCCEEEEEe--eCCCCCCCCCceEEEecC
Confidence 554 478999999999985 46888875 47899999999999 99999998887 677665 567776
Q ss_pred ccC
Q psy10015 71 CLK 73 (90)
Q Consensus 71 ~~~ 73 (90)
++|
T Consensus 93 i~H 95 (179)
T 2z5d_A 93 IFH 95 (179)
T ss_dssp CCB
T ss_pred Ccc
Confidence 443
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.55 E-value=5.4e-15 Score=108.44 Aligned_cols=67 Identities=22% Similarity=0.284 Sum_probs=55.8
Q ss_pred CchHHHHHHHHHHHHhhhCCCCC----EEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccc
Q psy10015 1 MAGSALRRLMAEYKQLTINPPEG----IIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWY 68 (90)
Q Consensus 1 Ms~~a~rRL~kEl~~l~~~~~~~----i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~ 68 (90)
||+.+.+||++|+++|+++++++ +.+.+ +++|++.|+++|.||+ ||+||.|+++| .||++| |.|.
T Consensus 73 ~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~-~ednl~~w~~~I~GP~~TpYegG~F~l~I--~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 73 NSAARARRLAQEAVTLSTSLPLSSSSSVFVRC-DEERLDIMKVLITGPADTPYANGCFEFDV--YFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEE-ESSCTTEEEEEEEBCTTSTTBTCEEEEEE--ECCTTTTTSCCEEEEC
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCcccceeecc-cCCCccccEEEEeCCCCCCcCCCEEEEEE--eCCCCCCCCCCeEEEe
Confidence 56678999999999999988764 45555 4679999999999999 99999998887 677665 5777
Q ss_pred cC
Q psy10015 69 IP 70 (90)
Q Consensus 69 ~~ 70 (90)
||
T Consensus 150 T~ 151 (323)
T 3ceg_A 150 TT 151 (323)
T ss_dssp CS
T ss_pred cc
Confidence 77
No 50
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.54 E-value=7.3e-15 Score=100.66 Aligned_cols=66 Identities=17% Similarity=0.256 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHHhhhCCCCCEEEe----ecCCCCce---EEEEEEeccC-CCCCCeEEEEEEEEecCCC------cccc
Q psy10015 3 GSALRRLMAEYKQLTINPPEGIIAG----PVNEENFF---EWEALITGNK-LYEWMPFALNLCYFFSKGN------SGWY 68 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~~i~~~----p~~~~nl~---~w~~~I~GP~-~Yegg~f~l~i~i~f~~~~------~~~~ 68 (90)
+.+.+||+||+++|+ ++++|++. + +++|++ +|+++|.+++ ||+||.|+++| .||++| |.|.
T Consensus 28 s~a~~RL~kEl~~l~--~~~~i~~~~~~~p-~~~nl~~~~~w~~~I~p~~tpyegg~f~~~i--~fp~~YP~~PP~v~f~ 102 (190)
T 3o2u_A 28 SAARIRLKRDLDSLD--LPPTVTLNVITSP-DSADRSQSPKLEVIVRPDEGYYNYGSINFNL--DFNEVYPIEPPKVVCL 102 (190)
T ss_dssp CHHHHHHHHHHHTCC--CCTTEEEEEEECT-TCCCTTSCCEEEEEECCSSSTTTTCCEEEEE--ECCTTTTTSCCEEEEC
T ss_pred cHHHHHHHHHHHhcc--CCCCEEEEecCCC-CCccCCcCCeEEEEEcCCCCCCCCCEEEEEE--ECCCCCCCCCceeEEe
Confidence 467899999999998 77899997 5 578999 9999998665 99999998887 666665 5777
Q ss_pred cCccC
Q psy10015 69 IPCLK 73 (90)
Q Consensus 69 ~~~~~ 73 (90)
||++|
T Consensus 103 t~i~H 107 (190)
T 3o2u_A 103 KKIFH 107 (190)
T ss_dssp SCCCC
T ss_pred cCccc
Confidence 88544
No 51
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.54 E-value=5.2e-15 Score=99.93 Aligned_cols=63 Identities=17% Similarity=0.198 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCCeEEEEEEEEecCCC------cccccCccC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWMPFALNLCYFFSKGN------SGWYIPCLK 73 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~f~l~i~i~f~~~~------~~~~~~~~~ 73 (90)
.+.+||++|+++|++++. ++ +. ++|+++|+++|.||+ +|+||.|+++| .||++| |.|.|+++|
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v---~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i--~fp~~YP~~PP~v~F~t~i~H 82 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV---YP-SDTVAEFWVEFKGPEGTPYEDGTWMLHV--QLPSDYPFKSPSIGFCNRILH 82 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE---EE-CSSTTEEEEEEECCTTSTTTTCEEEEEE--ECCTTTTTSCCEEEESSCCCB
T ss_pred cHHHHHHHHHHHHHhCCC-CC---CC-CCCceEEEEEEECCCCCCccCceEEEEE--EcCCCCCCCCCeEEeecCccc
Confidence 467999999999999874 34 33 578999999999999 89999998887 677665 577777544
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.01 E-value=2.2e-11 Score=82.21 Aligned_cols=52 Identities=13% Similarity=0.197 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCC--------eEEEEEEEEecCCC
Q psy10015 6 LRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWM--------PFALNLCYFFSKGN 64 (90)
Q Consensus 6 ~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg--------~f~l~i~i~f~~~~ 64 (90)
.+||++|+++|++ .+.+. ++|+.+|.+.+.||+ +|+|| .|.+++.+.||.+|
T Consensus 34 ~~RL~eE~k~L~k------~v~p~-k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~Y 95 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENN-KNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITY 95 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHH-HHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTT
T ss_pred HHHHHHHHHHHHH------HhccC-ccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCC
Confidence 8999999999998 34553 569999999999999 89999 23444455888887
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=96.87 E-value=0.00011 Score=49.00 Aligned_cols=52 Identities=15% Similarity=0.164 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC--CCCCC--------eEEEEEEEEecCCC
Q psy10015 6 LRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK--LYEWM--------PFALNLCYFFSKGN 64 (90)
Q Consensus 6 ~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg--------~f~l~i~i~f~~~~ 64 (90)
..||+.|++.|.+- ...+.++=.+|...+.||+ +|.|+ .|.+++.++||.+|
T Consensus 36 ~~RlkeEy~alI~y-------v~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tY 97 (168)
T 3kpa_A 36 TARLKEEYASLITY-------VEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTY 97 (168)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTT
T ss_pred HHHHHHHHHHHHHH-------HHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccC
Confidence 57999999998431 1111223356878888888 68888 44556666899888
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=95.28 E-value=0.076 Score=35.15 Aligned_cols=58 Identities=9% Similarity=-0.129 Sum_probs=38.1
Q ss_pred HHHHHHHHHHhhhCCC---CCEEEeecCCCCceEEEEEEeccC--CCCCCe-EEEEEEEEecCCC
Q psy10015 6 LRRLMAEYKQLTINPP---EGIIAGPVNEENFFEWEALITGNK--LYEWMP-FALNLCYFFSKGN 64 (90)
Q Consensus 6 ~rRL~kEl~~l~~~~~---~~i~~~p~~~~nl~~w~~~I~GP~--~Yegg~-f~l~i~i~f~~~~ 64 (90)
.+|..+|+.++.+.-+ +...+... +|...++-..+.|+- +|+||. |.+.|.+.||.+|
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~-~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~Y 93 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTH-SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMY 93 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEC-TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEc-CCCChheEEEEECccCccccCcccccccEEEEeCccc
Confidence 4677788777755322 22222333 455566666666655 899999 8888888999998
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=93.70 E-value=0.099 Score=34.05 Aligned_cols=32 Identities=9% Similarity=0.294 Sum_probs=28.7
Q ss_pred CCCceEEEEEEeccCCCCCCeEEEEEEEEecCCC
Q psy10015 31 EENFFEWEALITGNKLYEWMPFALNLCYFFSKGN 64 (90)
Q Consensus 31 ~~nl~~w~~~I~GP~~Yegg~f~l~i~i~f~~~~ 64 (90)
..++..|.++| |-+|+|+.|.+-|.+-||++|
T Consensus 50 ~~~LL~l~GtI--pv~y~g~~y~iPi~Iwlp~~Y 81 (146)
T 3obq_A 50 SRELMNLTGTI--PVPYRGNTYNIPICLWLLDTY 81 (146)
T ss_dssp TCEEEEEEEEE--EEECSSCEEEEEEEEECCTTT
T ss_pred hheEEEEEEEe--eeeecCccccceEEEEeCccC
Confidence 35899999999 678999999999999999987
No 56
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=55.16 E-value=12 Score=16.91 Aligned_cols=20 Identities=40% Similarity=0.707 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHhhhCCCCCE
Q psy10015 5 ALRRLMAEYKQLTINPPEGI 24 (90)
Q Consensus 5 a~rRL~kEl~~l~~~~~~~i 24 (90)
-..||.-|+...+.+|+.|.
T Consensus 6 eldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHhhhccCCCCCC
Confidence 45799999999999998763
No 57
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.80 E-value=47 Score=19.88 Aligned_cols=58 Identities=9% Similarity=-0.038 Sum_probs=32.5
Q ss_pred HHHHHHHHHhhhCCCC--CEEEeecCCCCceEEEEEEeccCCCCCCeEEEEEEEEecCCCc
Q psy10015 7 RRLMAEYKQLTINPPE--GIIAGPVNEENFFEWEALITGNKLYEWMPFALNLCYFFSKGNS 65 (90)
Q Consensus 7 rRL~kEl~~l~~~~~~--~i~~~p~~~~nl~~w~~~I~GP~~Yegg~f~l~i~i~f~~~~~ 65 (90)
.....|+..|+.--+. .+.+......+...+.+.|.. ....+....+.+.+.+|++|.
T Consensus 10 e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP 69 (128)
T 2ebk_A 10 EPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYP 69 (128)
T ss_dssp HHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTT
T ss_pred HHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCC
Confidence 3566788888763322 444322112234677777752 322233346777789999983
No 58
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.34 E-value=60 Score=19.30 Aligned_cols=58 Identities=14% Similarity=0.019 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccCCCCCCeEEEEEEEEecCCCc
Q psy10015 5 ALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNKLYEWMPFALNLCYFFSKGNS 65 (90)
Q Consensus 5 a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~~Yegg~f~l~i~i~f~~~~~ 65 (90)
...+...|+..|+.--+..+.+.. +.-..+.+.|..-..-.+....+.+.+.||++|.
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~~---~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP 68 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVLS---ENPPSFTITVTSEAGENDETVQTTLKFTYSEKYP 68 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEECC---SSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTT
T ss_pred hHHHHHHHHHHHHHHccCceEEcc---CCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCC
Confidence 456778899999876666676532 1235666666421111122345667779999984
No 59
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=35.88 E-value=32 Score=15.44 Aligned_cols=14 Identities=21% Similarity=0.275 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHhh
Q psy10015 4 SALRRLMAEYKQLT 17 (90)
Q Consensus 4 ~a~rRL~kEl~~l~ 17 (90)
...+.|+||+++-+
T Consensus 8 nlqkkirkelkqrq 21 (26)
T 1m46_B 8 NLQKKIRKELKQRQ 21 (26)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 35678899988754
No 60
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A*
Probab=33.20 E-value=19 Score=27.06 Aligned_cols=58 Identities=21% Similarity=0.344 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHhh-hCCCCCEEEeecCCCCce---------EEEEEEeccC-CCCCCeEEEEEEEEecC
Q psy10015 5 ALRRLMAEYKQLT-INPPEGIIAGPVNEENFF---------EWEALITGNK-LYEWMPFALNLCYFFSK 62 (90)
Q Consensus 5 a~rRL~kEl~~l~-~~~~~~i~~~p~~~~nl~---------~w~~~I~GP~-~Yegg~f~l~i~i~f~~ 62 (90)
.+.||.+-+++.. -.+|+.-++.|+.++++. +|.+.++.++ .|+|+.|.++.-+-+--
T Consensus 293 ~~~~l~~~~~~~~~~~~p~~~~lspig~~~~~~g~~~~~~~~f~~~~~r~~~~~~g~pf~ve~~~a~gg 361 (471)
T 1mu5_A 293 EITRLVETFKKYEDFRSPSADSLSVIGEDLIELGLKKIFNPDFAASITRKPKAYQGHPFIVEAGVAFGG 361 (471)
T ss_dssp HHHHHHHHHHHCCCCCCCCSTTCCCCCHHHHHHHHHHHHCCSEEEEEECCCEEETTEEEEEEEEEEEST
T ss_pred HHHHHHHHHHhccCccCCCccccCcCCHHHHHhhhhhccCceEEEEEecCCceecCCCEEEEEEeeccC
Confidence 4678888888886 233333355666555442 3777788777 89999999999886653
No 61
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=26.60 E-value=54 Score=14.89 Aligned_cols=14 Identities=29% Similarity=0.306 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHhhh
Q psy10015 5 ALRRLMAEYKQLTI 18 (90)
Q Consensus 5 a~rRL~kEl~~l~~ 18 (90)
..+||.||..+|..
T Consensus 9 nvkrlekevgkleg 22 (28)
T 4dac_A 9 NVKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhhhh
Confidence 46899999988864
No 62
>2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae}
Probab=26.37 E-value=60 Score=24.80 Aligned_cols=59 Identities=20% Similarity=0.317 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHhh-hCCCCCEEEeecCCCCce---------EEEEEEeccC-CCCCCeEEEEEEEEecC
Q psy10015 4 SALRRLMAEYKQLT-INPPEGIIAGPVNEENFF---------EWEALITGNK-LYEWMPFALNLCYFFSK 62 (90)
Q Consensus 4 ~a~rRL~kEl~~l~-~~~~~~i~~~p~~~~nl~---------~w~~~I~GP~-~Yegg~f~l~i~i~f~~ 62 (90)
...+++..-+.+.. -.+|+.-++.|+.++++. +|.+..+.++ .|+|+.|.++.-+-+--
T Consensus 291 ~~~~~ll~a~~~~k~~~~P~~~~lspig~~~~~~g~~~~~~~~f~~~~~r~~~~~~g~pf~vE~~~a~gg 360 (530)
T 2zbk_B 291 EEITRLVETFKKDEDFRSPSADSLSVIGEDLIELGLKKIFNPDFAASITRKPKAYQGHPFIVEAGVAFGG 360 (530)
T ss_dssp HHHHHHHHHHHHCCCCCCCCSTTCCCCCTTHHHHHTTTTTCCSEEEEEECCCEEETTEEEEEEEEEEEST
T ss_pred HHHHHHHHHHHhccCCCCCCccccCcCCHHHHHhhHHhhcCceEEEEEccCCceecCCCEEEEEEeeccC
Confidence 34566666677665 233333355676665542 3778888777 89999999999886653
No 63
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=25.84 E-value=33 Score=20.25 Aligned_cols=12 Identities=33% Similarity=0.733 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHh
Q psy10015 5 ALRRLMAEYKQL 16 (90)
Q Consensus 5 a~rRL~kEl~~l 16 (90)
-.||++|+++-|
T Consensus 63 QLKRvQRdlrGL 74 (87)
T 2rf4_B 63 QLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHhhcCC
Confidence 478999998877
No 64
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=24.34 E-value=1.1e+02 Score=23.73 Aligned_cols=55 Identities=11% Similarity=0.046 Sum_probs=40.0
Q ss_pred HHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC-CCCCCeEEEEEEEEecCC
Q psy10015 8 RLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK-LYEWMPFALNLCYFFSKG 63 (90)
Q Consensus 8 RL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~-~Yegg~f~l~i~i~f~~~ 63 (90)
--.+++.+|......++...-. +.++-...+.|.||+ .|--..|-+++.+.-|-+
T Consensus 23 ~a~~dl~eL~~kL~S~lv~Y~~-~G~~~di~i~lkgPdkIYGfSAFPVqi~i~~~~~ 78 (526)
T 2wb7_A 23 AAHKAAAELTAKLRSDFVEYGN-GGTAGQVLIHIYGPGLIYGFSAFPVQIRLEIPNQ 78 (526)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEE-BCSCSSSEEEEEEESCEETTCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhhhheEEecc-CCcccceEEEEEcCccccccccCcEEEEEecCCC
Confidence 3456677777666666665543 457777789999999 888889999988765544
No 65
>4fxi_A MRNA interferase RELE; toxin/antitoxin system, toxin, nuclease, translational contr response, RELB, ribosome, B-ME on Cys50; HET: CME; 1.80A {Escherichia coli} PDB: 4fxe_D 3kha_A* 4fxh_A* 2kc8_A 2kc9_A 3kiq_y* 3kis_y* 3kiu_y* 3kix_y*
Probab=21.74 E-value=88 Score=18.11 Aligned_cols=20 Identities=10% Similarity=0.132 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHHhhhCCCC
Q psy10015 3 GSALRRLMAEYKQLTINPPE 22 (90)
Q Consensus 3 ~~a~rRL~kEl~~l~~~~~~ 22 (90)
....+|+.+-+.++..+|.+
T Consensus 20 ~~~~~ri~~~l~~l~~nP~~ 39 (95)
T 4fxi_A 20 STVREQLKKKLVEVLESPRI 39 (95)
T ss_dssp HHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHhhCCCC
Confidence 34578999999999888754
No 66
>1zpw_X Hypothetical protein TT1823; hyphotetical protein, structural genom NPPSFA, national project on protein structural and function analyses; 1.64A {Thermus thermophilus} SCOP: d.58.58.1
Probab=20.15 E-value=1.1e+02 Score=17.53 Aligned_cols=36 Identities=17% Similarity=0.129 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCEEEeecCCCCceEEEEEEeccC
Q psy10015 4 SALRRLMAEYKQLTINPPEGIIAGPVNEENFFEWEALITGNK 45 (90)
Q Consensus 4 ~a~rRL~kEl~~l~~~~~~~i~~~p~~~~nl~~w~~~I~GP~ 45 (90)
.....|+++++++.....+.+.+.+..+ ...+.|-+
T Consensus 44 ~~~~~L~~~L~~~id~~~Dsv~iy~l~~------~~~~~G~~ 79 (90)
T 1zpw_X 44 RLLEDLRRRARRLLDLGQDALRIYPVAG------QVEVLGVG 79 (90)
T ss_dssp HHHHHHHHHHHHHCCTTTCEEEEEECCS------CCCCCSSS
T ss_pred HHHHHHHHHHHHhhCCCCCEEEEEEeCC------cEEEECCC
Confidence 3456888889888876677788877633 44555655
Done!