RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy10017
(324 letters)
>gnl|CDD|238817 cd01639, IMPase, IMPase, inositol monophosphatase and related
domains. A family of Mg++ dependent phosphatases,
inhibited by lithium, many of which may act on inositol
monophosphate substrate. They dephosphorylate inositol
phosphate to generate inositol, which may be recycled
into inositol lipids; in eukaryotes IMPase plays a vital
role in intracellular signaling. IMPase is one of the
proposed targets of Li+ therapy in manic-depressive
illness. This family contains some bacterial members of
the inositol monophosphatase family classified as
SuhB-like. E. coli SuhB has been suggested to
participate in posstranscriptional control of gene
expression, and its inositol monophosphatase activity
doesn't appear to be sufficient for its cellular
function. It has been proposed, that SuhB plays a role
in the biosynthesis of phosphatidylinositol in
mycobacteria.
Length = 244
Score = 277 bits (710), Expect = 3e-93
Identities = 97/235 (41%), Positives = 127/235 (54%), Gaps = 35/235 (14%)
Query: 7 MEDFVVNLAKECGELVRE-RNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHK 65
+ + + A++ GE++ E K VEEK + VDLVTE DK VEK +I + + YPDH
Sbjct: 1 LLNIAIEAARKAGEILLEAYEKLGLNVEEKGSPVDLVTEVDKAVEKLIIEILKKAYPDHG 60
Query: 66 FIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPI 125
F+GEES A G LT PTWIIDP+DGT NFVHG+P+F +SI V P +GV+Y PI
Sbjct: 61 FLGEESGAAG---GLTDEPTWIIDPLDGTTNFVHGFPHFAVSIALAVKGEPVVGVVYDPI 117
Query: 126 MDWLYTARKGCGAFHNGTRIHESETDS-------------------------------FV 154
+ L+TA +G GAF NG RI S V
Sbjct: 118 RNELFTAVRGQGAFLNGRRIRVSGRKELKDALVATGFPYDRGDNFDRYLNNFAKLLAKAV 177
Query: 155 SSIRTAGSCVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAGKD 209
+R GS + +A VA+G D Y E + WD+AAGA++V EAGG+V D G
Sbjct: 178 RGVRRLGSAALDLAYVAAGRLDGYWERGLKPWDVAAGALIVREAGGLVTDFDGGP 232
Score = 136 bits (346), Expect = 9e-39
Identities = 46/82 (56%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 229 YRFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYC 288
+ F+GEES A G LT PTWIIDP+DGT NFVHG+P+F +SI V P +GV+Y
Sbjct: 59 HGFLGEESGAAG---GLTDEPTWIIDPLDGTTNFVHGFPHFAVSIALAVKGEPVVGVVYD 115
Query: 289 PIMDWLYTARKGCGAFHNGTRI 310
PI + L+TA +G GAF NG RI
Sbjct: 116 PIRNELFTAVRGQGAFLNGRRI 137
>gnl|CDD|215930 pfam00459, Inositol_P, Inositol monophosphatase family.
Length = 269
Score = 235 bits (602), Expect = 1e-76
Identities = 94/238 (39%), Positives = 129/238 (54%), Gaps = 35/238 (14%)
Query: 5 QEMEDFVVNLAKECGELVRERNKQKKKVEEKLN-AVDLVTETDKEVEKRLIAGISEKYPD 63
+E+ V LA++ GE++RE VEEK + + DLVT DK E+ ++ ++ +P
Sbjct: 3 EEVLKIAVELARKAGEVLREAFSNDLTVEEKTSGSNDLVTAADKAAEELILEALAALFPG 62
Query: 64 HKFIGEESTADGIKCELTSN-PTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIY 122
H IGEE+ A G ELT + PTWIIDPIDGT NF+ G P F +SIG +V+ P +GV+Y
Sbjct: 63 HPIIGEETGAIG-GTELTDDGPTWIIDPIDGTKNFIRGIPQFAVSIGLLVNGEPVLGVVY 121
Query: 123 CPIMDWLYTARKGCGAFHNGTRIHESETD-----------------------------SF 153
P + LY+A KG GAF NG ++ S S
Sbjct: 122 APALGELYSAAKGKGAFLNGQKLPVSGAPLLSNALLVTLFGSSSVPDTSDATKLANVLSL 181
Query: 154 VS--SIRTAGSCVIAMALVASGGADAYMEF-NVHAWDMAAGAVLVTEAGGVVIDPAGK 208
V +R+ GS + + LVA G ADAY+EF + WD+AAG ++ EAGGVV D G
Sbjct: 182 VRAPGVRSVGSAALKLCLVAEGRADAYIEFGRLKPWDIAAGVAILREAGGVVTDLDGG 239
Score = 123 bits (311), Expect = 2e-33
Identities = 44/81 (54%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 231 FIGEESTADGIKCELTSN-PTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCP 289
IGEE+ A G ELT + PTWIIDPIDGT NF+ G P F +SIG +V+ P +GV+Y P
Sbjct: 65 IIGEETGAIG-GTELTDDGPTWIIDPIDGTKNFIRGIPQFAVSIGLLVNGEPVLGVVYAP 123
Query: 290 IMDWLYTARKGCGAFHNGTRI 310
+ LY+A KG GAF NG ++
Sbjct: 124 ALGELYSAAKGKGAFLNGQKL 144
>gnl|CDD|178168 PLN02553, PLN02553, inositol-phosphate phosphatase.
Length = 270
Score = 219 bits (559), Expect = 3e-70
Identities = 103/244 (42%), Positives = 134/244 (54%), Gaps = 36/244 (14%)
Query: 1 MLPTQEMEDFV---VNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGI 57
M ++E F+ V+ AK G+++R+ Q K VE K VDLVTETDK E + +
Sbjct: 1 MAQNDDLEQFLEVAVDAAKAAGQIIRKGFYQTKHVEHK-GQVDLVTETDKACEDLIFNHL 59
Query: 58 SEKYPDHKFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQ 117
+ +P HKFIGEE+TA ELT PTWI+DP+DGT NFVHG+P C+SIG + KVP
Sbjct: 60 KQAFPSHKFIGEETTAASGGTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPV 119
Query: 118 MGVIYCPIMDWLYTARKGCGAFHNGTRIHESETDSF------------------------ 153
+GV+Y PI+D L+TA KG GAF NG I S
Sbjct: 120 VGVVYNPILDELFTAVKGKGAFLNGKPIKASSQSELGKALLATEVGTKRDKATVDATTNR 179
Query: 154 -------VSSIRTAGSCVIAMALVASGGADAYMEFNVHA-WDMAAGAVLVTEAGGVVIDP 205
V S+R +GSC + + VA G D + E WD+AAGAV+V EAGG+V DP
Sbjct: 180 INALLYKVRSLRMSGSCALNLCGVACGRLDIFYEIGFGGPWDVAAGAVIVKEAGGLVFDP 239
Query: 206 AGKD 209
+G
Sbjct: 240 SGGP 243
Score = 120 bits (302), Expect = 4e-32
Identities = 49/82 (59%), Positives = 61/82 (74%)
Query: 229 YRFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYC 288
++FIGEE+TA ELT PTWI+DP+DGT NFVHG+P C+SIG + KVP +GV+Y
Sbjct: 66 HKFIGEETTAASGGTELTDEPTWIVDPLDGTTNFVHGFPFVCVSIGLTIGKVPVVGVVYN 125
Query: 289 PIMDWLYTARKGCGAFHNGTRI 310
PI+D L+TA KG GAF NG I
Sbjct: 126 PILDELFTAVKGKGAFLNGKPI 147
>gnl|CDD|238815 cd01637, IMPase_like, Inositol-monophosphatase-like domains. This
family of phosphatases is dependent on bivalent metal
ions such as Mg++, and many members are inhibited by Li+
(which is thought to displace a bivalent ion in the
active site). Substrates include
fructose-1,6-bisphosphate, inositol poly- and
monophosphates, PAP and PAPS,
sedoheptulose-1,7-bisphosphate and probably others.
Length = 238
Score = 210 bits (537), Expect = 2e-67
Identities = 82/236 (34%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 9 DFVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKFIG 68
+ + +E G L+ E ++ VE K DLVTE D E+ ++ + +PD +G
Sbjct: 2 ELALKAVREAGALILEAFGEELTVETKKGDGDLVTEADLAAEELIVDVLKALFPDDGILG 61
Query: 69 EESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDW 128
EE G W+IDPIDGT NFV G PNF +SI D P +GVIY P++D
Sbjct: 62 EEGGGSGNV--SDGGRVWVIDPIDGTTNFVAGLPNFAVSIALYEDGKPVLGVIYDPMLDE 119
Query: 129 LYTARKGCGAFHNGTRIHESETDSFVSS--------------------------IRTAGS 162
LY A +G GAF NG ++ S+ + IR GS
Sbjct: 120 LYYAGRGKGAFLNGKKLPLSKDTPLNDALLSTNASMLRSNRAAVLASLVNRALGIRIYGS 179
Query: 163 CVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAGKDKNRVEQSTI 218
+ +A VA+G DAY+ ++ WD AAGA++V EAGG+V D G+ + + +S I
Sbjct: 180 AGLDLAYVAAGRLDAYLSSGLNPWDYAAGALIVEEAGGIVTDLDGEPLDTLNRSGI 235
Score = 115 bits (289), Expect = 2e-30
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 229 YRFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYC 288
+GEE G W+IDPIDGT NFV G PNF +SI D P +GVIY
Sbjct: 57 DGILGEEGGGSGNV--SDGGRVWVIDPIDGTTNFVAGLPNFAVSIALYEDGKPVLGVIYD 114
Query: 289 PIMDWLYTARKGCGAFHNGTRI 310
P++D LY A +G GAF NG ++
Sbjct: 115 PMLDELYYAGRGKGAFLNGKKL 136
>gnl|CDD|223559 COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related
enzymes of inositol monophosphatase family [Carbohydrate
transport and metabolism].
Length = 260
Score = 209 bits (535), Expect = 9e-67
Identities = 85/236 (36%), Positives = 112/236 (47%), Gaps = 35/236 (14%)
Query: 5 QEMEDFVVNLAKECGELVRE--RNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYP 62
M + + A++ G L+ R +VE K + D VTE DK E+ + A + +P
Sbjct: 2 MPMLNIALRAARKAGALILPLFRELDAVEVEVKKSDGDPVTEADKAAERIIRARLRAAFP 61
Query: 63 DHKFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIY 122
DH +GEES W+IDPIDGT NFV G P F +SI V D P GVIY
Sbjct: 62 DHGILGEESGGALGG---GDEYVWVIDPIDGTTNFVRGIPFFAVSIALVEDGEPVAGVIY 118
Query: 123 CPIMDWLYTARKGCGAFHNGTRIHESETDSFVSS-------------------------- 156
P LYTA KG GA+ NG RI S S +S
Sbjct: 119 DPATGELYTAAKGKGAYLNGRRIKVSLRTSLNASLLGTGFPGKSLARFPAYLNILAKLLR 178
Query: 157 ----IRTAGSCVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAGK 208
+R GS + +A VA+G D ++EF + WD+AAG ++V EAGG+V D G
Sbjct: 179 KVRRVRRYGSAALDLAYVAAGRLDGFVEFGLRPWDIAAGVLIVREAGGIVTDLDGG 234
Score = 115 bits (289), Expect = 2e-30
Identities = 40/82 (48%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 229 YRFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYC 288
+ +GEES W+IDPIDGT NFV G P F +SI V D P GVIY
Sbjct: 63 HGILGEESGGALGG---GDEYVWVIDPIDGTTNFVRGIPFFAVSIALVEDGEPVAGVIYD 119
Query: 289 PIMDWLYTARKGCGAFHNGTRI 310
P LYTA KG GA+ NG RI
Sbjct: 120 PATGELYTAAKGKGAYLNGRRI 141
>gnl|CDD|238821 cd01643, Bacterial_IMPase_like_2, Bacterial family of Mg++
dependent phosphatases, related to inositol
monophosphatases. These enzymes may dephosphorylate
inositol monophosphate or similar substrates.
Length = 242
Score = 164 bits (417), Expect = 2e-49
Identities = 66/221 (29%), Positives = 93/221 (42%), Gaps = 31/221 (14%)
Query: 9 DFVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKFIG 68
+A+E G+ E K + LVT D+ VE+ + A ++ ++PD +G
Sbjct: 2 SLAEAIAQEAGDRALADFGNSLSAETKADG-SLVTAADRWVEQLIRARLAAQFPDDGVLG 60
Query: 69 EESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDW 128
EE +S W+IDPIDGT NF G P + ISI + P GVI P ++
Sbjct: 61 EEGG----GIFPSSGWYWVIDPIDGTTNFARGIPIWAISIALLYRGEPVFGVIALPALNQ 116
Query: 129 LYTARKGCGAFHNGTRI--------------------------HESETDSFVSSIRTAGS 162
+ A KG GAF NG + F IR GS
Sbjct: 117 TFVAFKGGGAFLNGKPLALHPPLQLPDCNVGFNRSSRASARAVLRVILRRFPGKIRMLGS 176
Query: 163 CVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVI 203
+ +A VA+G Y+E WD+AA V++ EAGG
Sbjct: 177 ASLNLASVAAGQTLGYVEATPKIWDIAAAWVILREAGGSWT 217
Score = 88.9 bits (221), Expect = 9e-21
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 231 FIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPI 290
+GEE +S W+IDPIDGT NF G P + ISI + P GVI P
Sbjct: 58 VLGEEGG----GIFPSSGWYWVIDPIDGTTNFARGIPIWAISIALLYRGEPVFGVIALPA 113
Query: 291 MDWLYTARKGCGAFHNGTRI 310
++ + A KG GAF NG +
Sbjct: 114 LNQTFVAFKGGGAFLNGKPL 133
>gnl|CDD|238816 cd01638, CysQ, CysQ, a 3'-Phosphoadenosine-5'-phosphosulfate (PAPS)
3'-phosphatase, is a bacterial member of the inositol
monophosphatase family. It has been proposed that CysQ
helps control intracellular levels of PAPS, which is an
intermediate in cysteine biosynthesis (a principal route
of sulfur assimilation).
Length = 242
Score = 136 bits (346), Expect = 8e-39
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 42/235 (17%)
Query: 7 MEDFVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKF 66
+ + ++ +A+E G+ + E + VE K + VT D ++ G++ PD
Sbjct: 1 LLELLIRIAREAGDAILEVYRGGFTVERKEDG-SPVTAADLAANAFIVEGLAALRPDIPV 59
Query: 67 IGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIM 126
+ EES D + L + W++DP+DGT F+ G F ++I V D P +GV+Y P +
Sbjct: 60 LSEESADDPL--RLGWDRFWLVDPLDGTREFIKGNGEFAVNIALVEDGRPVLGVVYAPAL 117
Query: 127 DWLYTARKGCGAFHNGTRIHES----------------------ETDSFVSS-----IRT 159
LY A +G GA+ NG S E ++ +++ + +
Sbjct: 118 GELYYALRGGGAYKNGRPGAVSLQARPPPLQPLRVVASRSHPDEELEALLAALGVAEVVS 177
Query: 160 AGSCVIAMALVASGGADAY------MEFNVHAWDMAAGAVLVTEAGGVVIDPAGK 208
GS + LVA G AD Y ME WD AAG ++ AGG V D G
Sbjct: 178 IGSSLKFC-LVAEGEADIYPRLGPTME-----WDTAAGDAVLRAAGGAVSDLDGS 226
Score = 79.2 bits (196), Expect = 3e-17
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 234 EESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDW 293
EES D + L + W++DP+DGT F+ G F ++I V D P +GV+Y P +
Sbjct: 62 EESADDPL--RLGWDRFWLVDPLDGTREFIKGNGEFAVNIALVEDGRPVLGVVYAPALGE 119
Query: 294 LYTARKGCGAFHNGTRI 310
LY A +G GA+ NG
Sbjct: 120 LYYALRGGGAYKNGRPG 136
>gnl|CDD|215392 PLN02737, PLN02737, inositol monophosphatase family protein.
Length = 363
Score = 136 bits (344), Expect = 3e-37
Identities = 79/230 (34%), Positives = 113/230 (49%), Gaps = 43/230 (18%)
Query: 11 VVNLAKECG-ELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKFIGE 69
V LA + G E+V E + + + K DLVT+TDK E ++ + + +PDH +GE
Sbjct: 82 VAELAAKTGAEVVMEAVNKPRNISYK-GLTDLVTDTDKASEAAILEVVRKNFPDHLILGE 140
Query: 70 ESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMG--VIYC--PI 125
E G+ + +S+ W IDP+DGT NF HGYP+F +S+G + P V + P
Sbjct: 141 EG---GVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGTPAAATVVEFVGGP- 196
Query: 126 MDW---LYTARKGCGAFHNGTRIHESETDSFVSS-------------------------- 156
M W ++A G GAF NG +IH S+TD S
Sbjct: 197 MCWNTRTFSASAGGGAFCNGQKIHVSQTDKVERSLLVTGFGYEHDDAWATNIELFKEFTD 256
Query: 157 ----IRTAGSCVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVV 202
+R G+ + M VA G +AY E+ + WDMAAG ++V EAGG V
Sbjct: 257 VSRGVRRLGAAAVDMCHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGTV 306
Score = 63.3 bits (154), Expect = 3e-11
Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 11/86 (12%)
Query: 232 IGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMG--VIYC- 288
+GEE G+ + +S+ W IDP+DGT NF HGYP+F +S+G + P V +
Sbjct: 138 LGEEG---GVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGTPAAATVVEFVG 194
Query: 289 -PIMDW---LYTARKGCGAFHNGTRI 310
P M W ++A G GAF NG +I
Sbjct: 195 GP-MCWNTRTFSASAGGGAFCNGQKI 219
>gnl|CDD|238814 cd01636, FIG, FIG, FBPase/IMPase/glpX-like domain. A superfamily of
metal-dependent phosphatases with various substrates.
Fructose-1,6-bisphospatase (both the major and the
glpX-encoded variant) hydrolyze
fructose-1,6,-bisphosphate to fructose-6-phosphate in
gluconeogenesis. Inositol-monophosphatases and inositol
polyphosphatases play vital roles in eukaryotic
signalling, as they participate in metabolizing the
messenger molecule Inositol-1,4,5-triphosphate. Many of
these enzymes are inhibited by Li+.
Length = 184
Score = 130 bits (330), Expect = 3e-37
Identities = 62/201 (30%), Positives = 85/201 (42%), Gaps = 24/201 (11%)
Query: 9 DFVVNLAKECGELVRE--RNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKF 66
+ + +AKE G + + + KV+ + D VT D E + + +PD K
Sbjct: 2 EELCRVAKEAGLAILKAFGRELSGKVKITKSDNDPVTTADVAAETLIRNMLKSSFPDVKI 61
Query: 67 IGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIM 126
+GEES TW+IDPIDGT NF++G P + I
Sbjct: 62 VGEESGVAEEVMGRRDEYTWVIDPIDGTKNFINGLPFVAVVIA----------------- 104
Query: 127 DWLYTARKGCGAFHNGTRIHESETD-SFVSSIRTAGSCVIAMALVASGGADAYMEF--NV 183
+Y H ++E V IR GS V M LVA G AD Y E
Sbjct: 105 --VYVILILAEPSHKRVDEKKAELQLLAVYRIRIVGSAVAKMCLVALGLADIYYEPGGKR 162
Query: 184 HAWDMAAGAVLVTEAGGVVID 204
AWD+AA A +V EAGG++ D
Sbjct: 163 RAWDVAASAAIVREAGGIMTD 183
Score = 60.9 bits (148), Expect = 3e-11
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 231 FIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIG 274
+GEES TW+IDPIDGT NF++G P + I
Sbjct: 61 IVGEESGVAEEVMGRRDEYTWVIDPIDGTKNFINGLPFVAVVIA 104
>gnl|CDD|238775 cd01517, PAP_phosphatase, PAP-phosphatase_like domains.
PAP-phosphatase is a member of the inositol
monophosphatase family, and catalyses the hydrolysis of
3'-phosphoadenosine-5'-phosphate (PAP) to AMP. In
Saccharomyces cerevisiae, HAL2 (MET22) is involved in
methionine biosynthesis and provides increased salt
tolerance when over-expressed. Bacterial members of this
domain family may differ in their substrate specificity
and dephosphorylate different targets, as the substrate
binding site does not appear to be conserved in that
sub-set.
Length = 274
Score = 132 bits (335), Expect = 7e-37
Identities = 65/267 (24%), Positives = 97/267 (36%), Gaps = 58/267 (21%)
Query: 8 EDFVVNLAKECGELV---RERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDH 64
E V LA + RN V K + VT D + + A ++ +P
Sbjct: 1 ELEVAILAVRAAASLTLPVFRNLGAGDVVWKKSDKSPVTVADYGAQALITAALARLFPSD 60
Query: 65 KFIGEE-STADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYC 123
+GEE S A G W++DPIDGT F+ G F +++ + D +GVI C
Sbjct: 61 PIVGEEDSAALG--------RFWVLDPIDGTKGFLRGDQ-FAVALALIEDGEVVLGVIGC 111
Query: 124 PIMDW-------LYTARKGCGAFHNGTRIHESETDSFVSSIRTAGSCVIAM--------- 167
P + L++A +G GA+ + S A +
Sbjct: 112 PNLPLDDGGGGDLFSAVRGQGAWLRPLDGSSLQPLSVRQLTNAARASFCESVESAHSSHR 171
Query: 168 -----------------------ALVASGGADAYMEFNVH------AWDMAAGAVLVTEA 198
A VA G AD Y+ + WD AAG ++V EA
Sbjct: 172 LQAAIKALGGTPQPVRLDSQAKYAAVARGAADFYLRLPLSMSYREKIWDHAAGVLIVEEA 231
Query: 199 GGVVIDPAGKDKNRVEQSTIWLDGKVI 225
GG V D GK + + + +G +I
Sbjct: 232 GGKVTDADGKPLDFGKGRKLLNNGGLI 258
Score = 73.9 bits (182), Expect = 4e-15
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 17/82 (20%)
Query: 231 FIGEE-STADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCP 289
+GEE S A G W++DPIDGT F+ G F +++ + D +GVI CP
Sbjct: 62 IVGEEDSAALG--------RFWVLDPIDGTKGFLRGDQ-FAVALALIEDGEVVLGVIGCP 112
Query: 290 IMDW-------LYTARKGCGAF 304
+ L++A +G GA+
Sbjct: 113 NLPLDDGGGGDLFSAVRGQGAW 134
>gnl|CDD|238819 cd01641, Bacterial_IMPase_like_1, Predominantly bacterial family of
Mg++ dependend phosphatases, related to inositol
monophosphatases. These enzymes may dephosphorylate
fructose-1,6-bisphosphate, inositol monophospate,
3'-phosphoadenosine-5'-phosphate, or similar
substrates.
Length = 248
Score = 131 bits (331), Expect = 2e-36
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 9 DFVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKFIG 68
F + LA G++ + + +VE K + VTE D+ E + I+ +PDH +G
Sbjct: 3 AFALELADAAGQITLPYFRTRLQVETKADF-SPVTEADRAAEAAMRELIAAAFPDHGILG 61
Query: 69 EESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDW 128
EE +G + W++DPIDGT +F+ G P + I + D P +GVI P +
Sbjct: 62 EEFGNEG----GDAGYVWVLDPIDGTKSFIRGLPVWGTLIALLHDGRPVLGVIDQPALGE 117
Query: 129 LYTARKGCGAFHN---GTRIHESET----DSFVSS-----------------------IR 158
+ +G G F N G + ++ +S+ R
Sbjct: 118 RWIGARGGGTFLNGAGGRPLRVRACADLAEAVLSTTDPHFFTPGDRAAFERLARAVRLTR 177
Query: 159 TAGSCVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAGK 208
G C A ALVASG D +E + +D+AA ++ AGGV+ D G
Sbjct: 178 YGGDC-YAYALVASGRVDLVVEAGLKPYDVAALIPIIEGAGGVITDWDGG 226
Score = 67.7 bits (166), Expect = 4e-13
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 231 FIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPI 290
+GEE +G + W++DPIDGT +F+ G P + I + D P +GVI P
Sbjct: 59 ILGEEFGNEG----GDAGYVWVLDPIDGTKSFIRGLPVWGTLIALLHDGRPVLGVIDQPA 114
Query: 291 MDWLYTARKGCGAFHNG 307
+ + +G G F NG
Sbjct: 115 LGERWIGARGGGTFLNG 131
>gnl|CDD|213680 TIGR02067, his_9_HisN, histidinol-phosphatase, inositol
monophosphatase family. This subfamily belongs to the
inositol monophosphatase family (pfam00459). The members
of this family consist of no more than one per species
and are found only in species in which histidine is
synthesized de novo but no histidinol phosphatase can be
found in either of the two described families
(TIGR01261, TIGR01856). In at least one species, the
member of this family is found near known histidine
biosynthesis genes. The role as histidinol-phosphatase
wsa first proven in Corynebacterium glutamicum [Amino
acid biosynthesis, Histidine family].
Length = 251
Score = 127 bits (320), Expect = 7e-35
Identities = 66/227 (29%), Positives = 95/227 (41%), Gaps = 30/227 (13%)
Query: 10 FVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKFIGE 69
F +LA GE + + V +K + VTE D+ E+ + I+ +PDH +GE
Sbjct: 4 FAEDLADAAGETILPFFRASLLVVDKKSDKTPVTEADRAAEEAMRELIAAFFPDHGILGE 63
Query: 70 ESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDWL 129
E G E + W++DPIDGT +F+ G P + I V +P +GVI+ P
Sbjct: 64 E---FGHNEEGDAERVWVLDPIDGTKSFIRGVPVWGTLIALVEGGMPVLGVIFQPATGER 120
Query: 130 YTARKGCGAFHNGTRIHESET----------------------DSFVSSIRTA-----GS 162
+ A G AF G R+ S +F R A G
Sbjct: 121 WWAAGGGAAFLGGRRLRVSSCANLSDAVLFTTSPYLLDDPENRPAFERLRRAARLTRYGG 180
Query: 163 CVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAGKD 209
A +VA G D +E + WD+AA ++ EAGG D GK
Sbjct: 181 DCYAYLMVAGGAVDIVVEPGLSPWDIAALIPVIEEAGGCFTDWDGKP 227
Score = 70.4 bits (173), Expect = 5e-14
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 231 FIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPI 290
+GEE G E + W++DPIDGT +F+ G P + I V +P +GVI+ P
Sbjct: 60 ILGEE---FGHNEEGDAERVWVLDPIDGTKSFIRGVPVWGTLIALVEGGMPVLGVIFQPA 116
Query: 291 MDWLYTARKGCGAFHNGTRIWSDSNTFSS 319
+ A G AF G R+ S S
Sbjct: 117 TGERWWAAGGGAAFLGGRRLRVSSCANLS 145
>gnl|CDD|130398 TIGR01331, bisphos_cysQ, 3'(2'),5'-bisphosphate nucleotidase,
bacterial. Sulfate is incorporated into
3-phosphoadenylylsulfate, PAPS, for utilization in
pathways such as methionine biosynthesis. Transfer of
sulfate from PAPS to an acceptor leaves adenosine
3'-5'-bisphosphate, APS. This model describes a form
found in bacteria of the enzyme 3'(2'),5'-bisphosphate
nucleotidase, which removes the 3'-phosphate from APS to
regenerate AMP and help drive the cycle [Central
intermediary metabolism, Sulfur metabolism].
Length = 249
Score = 116 bits (292), Expect = 7e-31
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 30/231 (12%)
Query: 7 MEDFVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKF 66
M D V+ +A+ GE + +++ V +K + VTE D+ + ++ G+ PD
Sbjct: 1 MLDDVIKIARAAGEEILPVYQKELAVAQKADNSP-VTEADRAAHRFILEGLRALTPDIPV 59
Query: 67 IGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIM 126
+ EE + + T W++DP+DGT F++ +F ++I V VP +GV+Y P
Sbjct: 60 LSEEDASIPLTPRQTWQRFWLVDPLDGTKEFINRNGDFTVNIALVEHGVPVLGVVYAPAT 119
Query: 127 DWLYTARKGCGAFHNGTRIH------------------------ESETDSFVSSI----R 158
Y A G A G E +T +++++ R
Sbjct: 120 GVTYFATAGKAAKREGDGQALKAPIHVRPWPSGPLLVVISRSHAEEKTTEYLANLGYDLR 179
Query: 159 TAGSCVIAMALVASGGADAYMEFN-VHAWDMAAGAVLVTEAGGVVIDPAGK 208
T+G + LVA G AD Y WD AAG ++ AGG + D G
Sbjct: 180 TSGGSSLKFCLVAEGSADIYPRLGPTGEWDTAAGHAVLAAAGGAIFDLDGS 230
Score = 64.4 bits (157), Expect = 5e-12
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 232 IGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIM 291
+ EE + + T W++DP+DGT F++ +F ++I V VP +GV+Y P
Sbjct: 60 LSEEDASIPLTPRQTWQRFWLVDPLDGTKEFINRNGDFTVNIALVEHGVPVLGVVYAPAT 119
Query: 292 DWLYTARKGCGA 303
Y A G A
Sbjct: 120 GVTYFATAGKAA 131
>gnl|CDD|236753 PRK10757, PRK10757, inositol monophosphatase; Provisional.
Length = 267
Score = 115 bits (289), Expect = 3e-30
Identities = 73/232 (31%), Positives = 106/232 (45%), Gaps = 34/232 (14%)
Query: 7 MEDFVVNLAKECGELVRERNKQKKKVE-EKLNAVDLVTETDKEVEKRLIAGISEKYPDHK 65
M + V A++ G L+ + + VE + + D VT DK E +I I + YP H
Sbjct: 4 MLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVDKAAEAVIIDTIRKSYPQHT 63
Query: 66 FIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPI 125
I EES G + W+IDP+DGT NF+ P+F +SI + ++ V+Y P+
Sbjct: 64 IITEES---GELEGEDQDVQWVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPM 120
Query: 126 MDWLYTARKGCGAFHNGTRIHESETDSFVSSI---------------------------- 157
+ L+TA +G GA NG R+ S +I
Sbjct: 121 RNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFKAKQHATTYINIVGKLFTECA 180
Query: 158 --RTAGSCVIAMALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAG 207
R GS + +A VA+G D + E + WD AAG +LV EAGG+V D G
Sbjct: 181 DFRRTGSAALDLAYVAAGRVDGFFEIGLKPWDFAAGELLVREAGGIVSDFTG 232
Score = 59.8 bits (145), Expect = 2e-10
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 251 WIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDWLYTARKGCGAFHNGTRI 310
W+IDP+DGT NF+ P+F +SI + ++ V+Y P+ + L+TA +G GA NG R+
Sbjct: 81 WVIDPLDGTTNFIKRLPHFAVSIAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRL 140
>gnl|CDD|224139 COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS)
3'-phosphatase [Inorganic ion transport and metabolism].
Length = 276
Score = 115 bits (289), Expect = 4e-30
Identities = 55/203 (27%), Positives = 79/203 (38%), Gaps = 38/203 (18%)
Query: 41 LVTETDKEVEKRLIAGISEKYPDHKFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHG 100
VT D ++ ++ G+ +PD + EE A + L + W++DP+DGT F+
Sbjct: 42 PVTAADLAAQQIILEGLRALFPDIPVVSEEEEAIDWEERLHWDRFWLVDPLDGTKEFIKR 101
Query: 101 YPNFCISIGYVVDKVPQMGVIYCPIMDWLYTARKGCGAFHNGTRIHESETDSFVSSIRTA 160
+F ++I + + VP +GV+Y P LY A G GA + IR
Sbjct: 102 NGDFAVNIALIENGVPVLGVVYAPETGKLYYAAAGGGAKREQSDNEGLR---KKIPIRVR 158
Query: 161 ----------------------------------GSCVIAMALVASGGADAYMEFN-VHA 185
GS + LVA G AD Y F
Sbjct: 159 TPPKSLLVVASRSHRSPETEELLAQLGFIQTVSIGSSGLKFCLVAEGAADIYPRFGPTME 218
Query: 186 WDMAAGAVLVTEAGGVVIDPAGK 208
WD AAG ++ AGG V D GK
Sbjct: 219 WDTAAGHAVLEAAGGHVTDLDGK 241
Score = 72.0 bits (177), Expect = 2e-14
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 231 FIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPI 290
+ EE A + L + W++DP+DGT F+ +F ++I + + VP +GV+Y P
Sbjct: 67 VVSEEEEAIDWEERLHWDRFWLVDPLDGTKEFIKRNGDFAVNIALIENGVPVLGVVYAPE 126
Query: 291 MDWLYTARKGCGAF 304
LY A G GA
Sbjct: 127 TGKLYYAAAGGGAK 140
>gnl|CDD|183673 PRK12676, PRK12676, bifunctional inositol-1
monophosphatase/fructose-1,6-bisphosphatase; Reviewed.
Length = 263
Score = 98.1 bits (245), Expect = 6e-24
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 85 TWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDWLYTARKGCGAFHNGTR 144
T ++DP+DGT N ++G P + ISI P G +Y Y A G GA+ NG
Sbjct: 83 TVVLDPLDGTYNAINGIPFYAISIAVFKGGKPVYGYVYNLATGDFYEAIPGKGAYLNGKP 142
Query: 145 IHESETDSF-----------------------VSSIRTAGSCVIAMALVASGGADAYMEF 181
I S+T V +R G+ + + VASG DA+++
Sbjct: 143 IKVSKTSELNESAVSIYGYRRGKERTVKLGRKVRRVRILGAIALELCYVASGRLDAFVDV 202
Query: 182 --NVHAWDMAAGAVLVTEAGGVVIDPAGKD 209
+ D+AAG ++ EAGG+V D G +
Sbjct: 203 RNYLRVTDIAAGKLICEEAGGIVTDEDGNE 232
Score = 68.0 bits (167), Expect = 3e-13
Identities = 23/61 (37%), Positives = 31/61 (50%)
Query: 250 TWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDWLYTARKGCGAFHNGTR 309
T ++DP+DGT N ++G P + ISI P G +Y Y A G GA+ NG
Sbjct: 83 TVVLDPLDGTYNAINGIPFYAISIAVFKGGKPVYGYVYNLATGDFYEAIPGKGAYLNGKP 142
Query: 310 I 310
I
Sbjct: 143 I 143
>gnl|CDD|238773 cd01515, Arch_FBPase_1, Archaeal fructose-1,6-bisphosphatase and
related enzymes of inositol monophosphatase family
(FBPase class IV). These are Mg++ dependent
phosphatases. Members in this family may have both
fructose-1,6-bisphosphatase and inositol-monophosphatase
activity. In hyperthermophilic archaea, inositol
monophosphatase is thought to play a role in the
biosynthesis of di-myo-inositol-1,1'-phosphate, an
osmolyte unique to hyperthermophiles.
Length = 257
Score = 88.6 bits (220), Expect = 2e-20
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 27/152 (17%)
Query: 85 TWIIDPIDGTMNFVHGYPNF--CISIGYVVDKVPQMGVIYCPIMDWLYTARKGCGAFHNG 142
T ++DP+DGT N ++G P + +++ + P G +Y LY A KG GA+ NG
Sbjct: 78 TVVLDPLDGTYNAINGIPFYSVSVAVFKIDKSDPYYGYVYNLATGDLYYAIKGKGAYLNG 137
Query: 143 TRIHESETDSF-----------------------VSSIRTAGSCVIAMALVASGGADAYM 179
RI S+ S V +R GS + + VASG DA++
Sbjct: 138 KRIKVSDFSSLKSISVSYYIYGKNHDRTFKICRKVRRVRIFGSVALELCYVASGALDAFV 197
Query: 180 EFN--VHAWDMAAGAVLVTEAGGVVIDPAGKD 209
+ + D+AAG ++ EAGG+V D GK+
Sbjct: 198 DVRENLRLVDIAAGYLIAEEAGGIVTDENGKE 229
Score = 55.1 bits (133), Expect = 9e-09
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 250 TWIIDPIDGTMNFVHGYPNF--CISIGYVVDKVPQMGVIYCPIMDWLYTARKGCGAFHNG 307
T ++DP+DGT N ++G P + +++ + P G +Y LY A KG GA+ NG
Sbjct: 78 TVVLDPLDGTYNAINGIPFYSVSVAVFKIDKSDPYYGYVYNLATGDLYYAIKGKGAYLNG 137
Query: 308 TRI 310
RI
Sbjct: 138 KRI 140
>gnl|CDD|178499 PLN02911, PLN02911, inositol-phosphate phosphatase.
Length = 296
Score = 83.2 bits (206), Expect = 2e-18
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 34/237 (14%)
Query: 2 LPTQEMEDFVV---NLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGIS 58
L ++ FV LA GE+ R+ + K ++ +K + VT D+ E+ + + I
Sbjct: 28 LSDAVLDRFVDVAHKLADAAGEVTRKYFRTKFEIIDKEDL-SPVTIADRAAEEAMRSIIL 86
Query: 59 EKYPDHKFIGEESTADGIKC-ELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQ 117
E +P H GEE G++C E +S+ W++DPIDGT +F+ G P F I + P
Sbjct: 87 ENFPSHAIFGEE---HGLRCGEGSSDYVWVLDPIDGTKSFITGKPLFGTLIALLYKGKPV 143
Query: 118 MGVIYCPIMDWLYTARKGCGAFHNGTRI------------------HESETDSFVSSIRT 159
+G+I P++ + G NG I H D+ + R
Sbjct: 144 LGIIDQPVLKERWVGVAGRATTLNGEEISTRSCASLKDAYLYTTSPHMFSGDAEDAFARV 203
Query: 160 AGSCVIAM--------ALVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAGK 208
+ + L+ASG D +E + +D A +V AGGV+ D G+
Sbjct: 204 RDKVKVPLYGCDCYAYGLLASGHVDLVVESGLKPYDYLALVPVVEGAGGVITDWKGR 260
Score = 47.4 bits (113), Expect = 4e-06
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 233 GEESTADGIKC-ELTSNPTWIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIM 291
GEE G++C E +S+ W++DPIDGT +F+ G P F I + P +G+I P++
Sbjct: 96 GEE---HGLRCGEGSSDYVWVLDPIDGTKSFITGKPLFGTLIALLYKGKPVLGIIDQPVL 152
Query: 292 DWLYTARKGCGAFHNGTRI 310
+ G NG I
Sbjct: 153 KERWVGVAGRATTLNGEEI 171
>gnl|CDD|233360 TIGR01330, bisphos_HAL2, 3'(2'),5'-bisphosphate nucleotidase, HAL2
family. Sulfate is incorporated into
3-phosphoadenylylsulfate, PAPS, for utilization in
pathways such as methionine biosynthesis. Transfer of
sulfate from PAPS to an acceptor leaves adenosine
3'-5'-bisphosphate, APS. This model describes a form
found in plants of the enzyme 3'(2'),5'-bisphosphate
nucleotidase, which removes the 3'-phosphate from APS to
regenerate AMP and help drive the cycle. Sensitivity of
this essential enzyme to sodium and other metal ions
results is responsible for characterization of this
enzyme as a salt tolerance protein. Some members of this
family are active also as inositol 1-monophosphatase.
Length = 353
Score = 70.7 bits (173), Expect = 1e-13
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 58/180 (32%)
Query: 86 WIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIM----------------DWL 129
W++DPIDGT F+ G + + + + + +GVI CP + +
Sbjct: 133 WVLDPIDGTKGFLRG-DQYAVCLALIENGKVVLGVIGCPNLPLSSYGAQNLKGSESKGCI 191
Query: 130 YTARKGCGAF----HNG----TRIHESETD-----SFVSSIRTAGS-----CVIA----- 166
+ A +G GAF + T++H S F + S IA
Sbjct: 192 FRAVRGSGAFMYSLSSDAESPTKVHVSSVKDTKDAIFCEGVEKGHSSHDEQTAIANKLGI 251
Query: 167 ------------MALVASGGADAYMEFNVHA------WDMAAGAVLVTEAGGVVIDPAGK 208
A +A G AD Y+ + WD AAG V+V EAGG+V D GK
Sbjct: 252 SKSPLRLDSQAKYAALARGDADVYLRLPIKLSYQEKIWDHAAGNVIVEEAGGIVTDAMGK 311
Score = 45.2 bits (107), Expect = 2e-05
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 251 WIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCP 289
W++DPIDGT F+ G + + + + + +GVI CP
Sbjct: 133 WVLDPIDGTKGFLRG-DQYAVCLALIENGKVVLGVIGCP 170
>gnl|CDD|182848 PRK10931, PRK10931, adenosine-3'(2'),5'-bisphosphate nucleotidase;
Provisional.
Length = 246
Score = 60.1 bits (146), Expect = 2e-10
Identities = 61/238 (25%), Positives = 94/238 (39%), Gaps = 48/238 (20%)
Query: 7 MEDFVVNLAKECGELVRE--RNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDH 64
M + + LA+ G+ + + + V K + VT D + G+ PD
Sbjct: 1 MLEQICQLARNAGDAIMQVYDGTKPLDVASKADD-SPVTAADIAAHTVIKDGLRTLTPDI 59
Query: 65 KFIGEESTADGIKCELTSNPT--WIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIY 122
+ EE D E+ + W++DP+DGT F+ F ++I + P +GV+Y
Sbjct: 60 PVLSEE---DPPAWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIEQGKPVLGVVY 116
Query: 123 CPIMDWLYTARKG------CGAFHN------------GTRIH-------------ESETD 151
P+M+ +Y+A +G CG +R H E +T
Sbjct: 117 APVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTT 176
Query: 152 SFVSSIRTAGSCVIAMALVASGGADAYMEFN-VHAWDMAAGAVLVTEAGGVVIDPAGK 208
S SS++ LVA G A Y F + WD AAG + AG V D GK
Sbjct: 177 SIGSSLK--------FCLVAEGQAQLYPRFGPTNIWDTAAGHAVAIAAGAHVHDWQGK 226
Score = 50.8 bits (122), Expect = 2e-07
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 251 WIIDPIDGTMNFVHGYPNFCISIGYVVDKVPQMGVIYCPIMDWLYTARKG 300
W++DP+DGT F+ F ++I + P +GV+Y P+M+ +Y+A +G
Sbjct: 80 WLVDPLDGTKEFIKRNGEFTVNIALIEQGKPVLGVVYAPVMNVMYSAAEG 129
>gnl|CDD|237601 PRK14076, pnk, inorganic polyphosphate/ATP-NAD kinase; Provisional.
Length = 569
Score = 60.9 bits (148), Expect = 3e-10
Identities = 56/206 (27%), Positives = 77/206 (37%), Gaps = 56/206 (27%)
Query: 57 ISEKYPDHKFIGEESTADGIKCELTSNPTWI--IDPIDGTMNFVHGYPNFCISIGYVVDK 114
EK+ I EE G K + P +I +DPIDGT N + P + SI + K
Sbjct: 56 SLEKFCSGILISEEI---GFKKIGKNKPEYIFVLDPIDGTYNALKDIPIYSASIA--IAK 110
Query: 115 VP-------------------QMGVIYCPIMDWLYTARKGCGAF----HNGTRIHESET- 150
+ ++GV+ Y A KG GA+ +I S
Sbjct: 111 IDGFDKKIKEFIGKNLTINDLEVGVVKNIATGDTYYAEKGEGAYLLKKGEKKKIEISNIS 170
Query: 151 -----------------------DSFVSSIRTAGSCVIAMALVASGGADAYMEFNVHA-- 185
D V IR GS + M VASG DA++ N
Sbjct: 171 NLKDASIGLFAYGLSLDTLKFIKDRKVRRIRLFGSIALEMCYVASGALDAFINVNETTRL 230
Query: 186 WDMAAGAVLVTEAGGVVIDPAGKDKN 211
D+AAG V+ EAGG++ + GK N
Sbjct: 231 CDIAAGYVICKEAGGIITNKNGKPLN 256
Score = 28.5 bits (64), Expect = 5.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 252 IIDPIDGTMNFVHGYPNFCISI 273
++DPIDGT N + P + SI
Sbjct: 85 VLDPIDGTYNALKDIPIYSASI 106
>gnl|CDD|238818 cd01640, IPPase, IPPase; Inositol polyphosphate-1-phosphatase, a
member of the Mg++ dependent family of inositol
monophosphatase-like domains, hydrolyzes the 1' position
phosphate from inositol 1,3,4-trisphosphate and inositol
1,4-bisphosphate. Members in this group may also exhibit
3'-phosphoadenosine 5'-phosphate phosphatase activity,
and they all appear to be inhibited by lithium. IPPase
is one of the proposed targets of Li+ therapy in
manic-depressive illness.
Length = 293
Score = 58.9 bits (143), Expect = 7e-10
Identities = 53/267 (19%), Positives = 94/267 (35%), Gaps = 75/267 (28%)
Query: 11 VVNLAKECGELVR-----ERNKQK-KKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDH 64
++ +A++ G + R R + + K A D T D+ ++ + + +++P
Sbjct: 5 LLAVAEKAGGIARDVVKKGRLLILLVEGKTKEGANDFKTLADRLSQRVIKHSLQKQFPKL 64
Query: 65 KFIGEES----TADGIKCELTSNPT--------------------WIIDPIDGTMNFVHG 100
K IGEE + ++ + W +DP+D T + G
Sbjct: 65 KIIGEEDNEFENQEDESRDVDLDEEILEESCPSPSKDLPEEDLGVW-VDPLDATQEYTEG 123
Query: 101 YPNFC-ISIGYVVDKVPQMGVIYCPIMDWLYTARK------------GCGAFHNGTRIHE 147
+ + IG V P GVI+ P + TA G GA + + E
Sbjct: 124 LLEYVTVLIGVAVKGKPIAGVIHQPFYE--KTAGAGAWLGRTIWGLSGLGAHSSDFKERE 181
Query: 148 SETDSFVSSIRTAG----SCVIAMA---LVASGGA------------DAYMEFNVHA--- 185
VS+ + + A ++ +GGA DAY VH+
Sbjct: 182 DAGKIIVSTSHSHSVKEVQLITAGNKDEVLRAGGAGYKVLQVLEGLADAY----VHSTGG 237
Query: 186 ---WDMAAGAVLVTEAGGVVIDPAGKD 209
WD+ A ++ GG + D G+
Sbjct: 238 IKKWDICAPEAILRALGGDMTDLHGEP 264
Score = 37.7 bits (88), Expect = 0.005
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 253 IDPIDGTMNFVHGYPNFC-ISIGYVVDKVPQMGVIYCP 289
+DP+D T + G + + IG V P GVI+ P
Sbjct: 111 VDPLDATQEYTEGLLEYVTVLIGVAVKGKPIAGVIHQP 148
>gnl|CDD|238820 cd01642, Arch_FBPase_2, Putative fructose-1,6-bisphosphatase or
related enzymes of inositol monophosphatase family.
These are Mg++ dependent phosphatases. Members in this
family may have fructose-1,6-bisphosphatase and/or
inositol-monophosphatase activity.
Fructose-1,6-bisphosphatase catalyzes the hydrolysis of
fructose-1,6-biphosphate into fructose-6-phosphate and
is critical in gluconeogenesis pathway.
Length = 244
Score = 48.6 bits (116), Expect = 1e-06
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 7 MEDFVVNLAKECGELVRERNKQKKKVEEKLN---AVDLVTETDKEVEKRLIAGISEKYPD 63
M + + + KE L+ E + ++ KL D+ D + E+ ++ + E+
Sbjct: 1 MLEVLEKITKEIILLLNE---KNRQGLVKLIRGAGGDVTRVADLKAEEIILKLLREEGVF 57
Query: 64 HKFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIG 109
+ I EES G + + ++DP+DG+ N++ G P + +S+
Sbjct: 58 GQIISEES---GEIRKGSGEYIAVLDPLDGSTNYLSGIPFYSVSVA 100
Score = 39.0 bits (91), Expect = 0.002
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 230 RFIGEESTADGIKCELTSNPTWIIDPIDGTMNFVHGYPNFCISIG 274
+ I EES G + + ++DP+DG+ N++ G P + +S+
Sbjct: 59 QIISEES---GEIRKGSGEYIAVLDPLDGSTNYLSGIPFYSVSVA 100
>gnl|CDD|236161 PRK08137, PRK08137, amidase; Provisional.
Length = 497
Score = 32.4 bits (74), Expect = 0.36
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 8/39 (20%)
Query: 81 TSNPTWIIDPIDG--------TMNFVHGYPNFCISIGYV 111
T+ P W+ID I+G T V GYP+ + +G V
Sbjct: 415 TTGPAWLIDLINGDSFGGSSSTPAAVAGYPHLTVPMGQV 453
Score = 32.4 bits (74), Expect = 0.36
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 8/39 (20%)
Query: 246 TSNPTWIIDPIDG--------TMNFVHGYPNFCISIGYV 276
T+ P W+ID I+G T V GYP+ + +G V
Sbjct: 415 TTGPAWLIDLINGDSFGGSSSTPAAVAGYPHLTVPMGQV 453
>gnl|CDD|224453 COG1536, FliG, Flagellar motor switch protein [Cell motility and
secretion].
Length = 339
Score = 31.9 bits (73), Expect = 0.47
Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 15/78 (19%)
Query: 1 MLPTQEMEDFVVNLAK---------------ECGELVRERNKQKKKVEEKLNAVDLVTET 45
LP + D V +A +L N+ K+ A +++
Sbjct: 155 TLPEELRADVVKRIATLEGVSPEALAELENVLEKKLQSLVNEDYSKLGGIKAAAEILNLL 214
Query: 46 DKEVEKRLIAGISEKYPD 63
D+ EK ++ + E+ P+
Sbjct: 215 DRGTEKTILESLEEEDPE 232
>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase. Member
identified as possible enoyl reductase of the MDR
family. 2-enoyl thioester reductase (ETR) catalyzes the
NADPH-dependent dependent conversion of trans-2-enoyl
acyl carrier protein/coenzyme A (ACP/CoA) to
acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl
thioester reductase activity has been linked in Candida
tropicalis as essential in maintaining mitiochondrial
respiratory function. This ETR family is a part of the
medium chain dehydrogenase/reductase family, but lack
the zinc coordination sites characteristic of the
alcohol dehydrogenases in this family.
NAD(P)(H)-dependent oxidoreductases are the major
enzymes in the interconversion of alcohols and
aldehydes, or ketones. Alcohol dehydrogenase in the
liver converts ethanol and NAD+ to acetaldehyde and
NADH, while in yeast and some other microorganisms ADH
catalyzes the conversion acetaldehyde to ethanol in
alcoholic fermentation. ADH is a member of the medium
chain alcohol dehydrogenase family (MDR), which has a
NAD(P)(H)-binding domain in a Rossmann fold of a
beta-alpha form. The NAD(H)-binding region is comprised
of 2 structurally similar halves, each of which contacts
a mononucleotide. The N-terminal catalytic domain has a
distant homology to GroES. These proteins typically
form dimers (typically higher plants, mammals) or
tetramers (yeast, bacteria), and have 2 tightly bound
zinc atoms per subunit, a catalytic zinc at the active
site, and a structural zinc in a lobe of the catalytic
domain. NAD(H) binding occurs in the cleft between the
catalytic and coenzyme-binding domains at the active
site, and coenzyme binding induces a conformational
closing of this cleft. Coenzyme binding typically
precedes and contributes to substrate binding. Candida
tropicalis enoyl thioester reductase (Etr1p) catalyzes
the NADPH-dependent reduction of trans-2-enoyl
thioesters in mitochondrial fatty acid synthesis. Etr1p
forms homodimers, with each subunit containing a
nucleotide-binding Rossmann fold domain and a catalytic
domain.
Length = 324
Score = 30.8 bits (70), Expect = 0.87
Identities = 17/67 (25%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 153 FVSSIRTAGSCVIAMA-------LVASGGADAYMEFNVHAWDMAAGAVLVTEAGGVVIDP 205
V + AG+ V+ A LV + GAD +++ W L VV+D
Sbjct: 159 LVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDG 218
Query: 206 AGKDKNR 212
G R
Sbjct: 219 VGGAIGR 225
>gnl|CDD|226028 COG3497, COG3497, Phage tail sheath protein FI [General function
prediction only].
Length = 394
Score = 30.4 bits (69), Expect = 1.2
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Query: 138 AFHNGTRIHESETDSFVSSIRTAGSCVIAMALVASGGADAYMEFNV 183
+H+G R+ E E I T S VI + A A N
Sbjct: 4 YYHHGVRVTEIED--GTRPINTVSSSVIGLVGTADDADAAIFPLNK 47
>gnl|CDD|220221 pfam09402, MSC, Man1-Src1p-C-terminal domain. MAN1 is an integral
protein of the inner nuclear membrane which binds to
chromatin associated proteins and plays a role in
nuclear organisation. The C terminal nucleoplasmic
region forms a DNA binding winged helix and binds to
Smad. This C-terminal tail is also found in S.
cerevisiae and is thought to consist of three conserved
helices followed by two downstream strands.
Length = 326
Score = 30.1 bits (68), Expect = 1.4
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 3 PTQEMEDFVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEV-EKRLIAGISEKY 61
P E E+ V L + E +R+RN + + E+ L+ E + + EK+ E++
Sbjct: 87 PDTEKEELVSELVDKALEELRKRNAKHECGEDDLSPGISENELYELLSEKKSPWINEEEF 146
Query: 62 PDHKFIGEESTADGIKCELTSNPTWIIDPID 92
D A IK EL NP +I P
Sbjct: 147 EDLW-----KAA--IK-ELKENPEVVIRPEP 169
>gnl|CDD|225871 COG3334, COG3334, Uncharacterized conserved protein [Function
unknown].
Length = 192
Score = 29.4 bits (66), Expect = 1.9
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 6 EMEDFVVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKR 52
E+E F N+A + +K++ EKL + V E K +EK+
Sbjct: 56 EIEKFCANIADA---AADQLYALQKELLEKLKDLAEVNERLKALEKK 99
>gnl|CDD|222290 pfam13654, AAA_32, AAA domain. This family includes a wide variety
of AAA domains including some that have lost essential
nucleotide binding residues in the P-loop.
Length = 509
Score = 29.0 bits (66), Expect = 3.5
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 2 LPTQEMEDF---VVNLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGIS 58
LP +E E+ + L +E E++R+ + +++ EKL +D E L+ +
Sbjct: 172 LPEEEREELEEKIDELEEELQEILRQLRELEREAREKLRELDR--EVALFAVGPLLDELK 229
Query: 59 EKYPDHK 65
EKY D
Sbjct: 230 EKYADLP 236
>gnl|CDD|237354 PRK13341, PRK13341, recombination factor protein RarA/unknown
domain fusion protein; Reviewed.
Length = 725
Score = 28.9 bits (65), Expect = 5.0
Identities = 10/46 (21%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Query: 176 DAYMEFNVHAWDMAAGAVLVTEAGGVVIDPAGKDKNRVEQSTIWLD 221
+ + A AV E G V+ + +D +R+ LD
Sbjct: 498 NLANRSLLWALG-PLRAV--PEGGVTVLCSSQEDSDRLVAQLELLD 540
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor
protein; Reviewed.
Length = 782
Score = 28.6 bits (65), Expect = 5.2
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 15 AKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISEKYPDHKFIGE-ESTA 73
A+E L++E K K+++EEK + +E E +L+ ++ + I E + A
Sbjct: 536 AEEAEALLKEAEKLKEELEEKKEKL-------QEEEDKLLEEAEKEA--QQAIKEAKKEA 586
Query: 74 DGIKCEL 80
D I EL
Sbjct: 587 DEIIKEL 593
>gnl|CDD|241305 cd10569, FERM_C_Talin, Talin FERM domain C-lobe/F3. Talin (also
called filopodin) plays an important role in initiating
actin filament growth in motile cell protrusions. It is
responsible for linking the cytoplasmic domains of
integrins to the actin-based cytoskeleton, and is
involved in vinculin, integrin and actin interactions.
At the leading edge of motile cells, talin colocalises
with the hyaluronan receptor layilin in transient
adhesions, some of which become more stable focal
adhesions (FA). During this maturation process, layilin
is replaced with integrins, where localized production
of PI(4,5)P(2) by type 1 phosphatidyl inositol
phosphate kinase type 1gamma (PIPK1gamma) is thought to
play a role in FA assembly. Talins are composed of a
N-terminal region FERM domain which us made up of 3
subdomains (N, alpha-, and C-lobe-or- A-lobe, B-lobe,
C-lobe -or- F1, F2, F3) connected by short linkers, a
talin rod which binds vinculin, and a conserved
C-terminal with actin- and integrin-binding sites.
There are 2 additional actin-binding domains, one in
the talin rod and the other in the FERM domain. Both
the F2 and F3 FERM subdomains contribute to F-actin
binding. Subdomain F3 of the FERM domain contains
overlapping binding sites for integrin cytoplasmic
domains and for the type 1 gamma isoform of PIP-kinase
(phosphatidylinositol 4-phosphate 5-kinase). The FERM
domain has a cloverleaf tripart structure . F3 within
the FERM domain is part of the PH domain family. The
FERM domain is found in the cytoskeletal-associated
proteins such as ezrin, moesin, radixin, 4.1R, and
merlin. These proteins provide a link between the
membrane and cytoskeleton and are involved in signal
transduction pathways. The FERM domain is also found in
protein tyrosine phosphatases (PTPs) , the tyrosine
kinases FAK and JAK, in addition to other proteins
involved in signaling. This domain is structurally
similar to the PH and PTB domains and consequently is
capable of binding to both peptides and phospholipids
at different sites.
Length = 92
Score = 26.5 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 21 LVRERNKQKKKVEEKL-----NAVDLVTETDKEVEK 51
LV+E+ K K K+ +L +V V E KEV K
Sbjct: 6 LVKEKMKGKNKLVPRLLGITKESVLRVDEETKEVLK 41
>gnl|CDD|178306 PLN02703, PLN02703, beta-fructofuranosidase.
Length = 618
Score = 28.1 bits (62), Expect = 7.0
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 219 WLDGKVITYIYRFIGEESTADGI-KCELTSN--PTWIID 254
WLD K I IYR+ EE + D + K + + P+W++D
Sbjct: 372 WLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVD 410
>gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional.
Length = 880
Score = 28.1 bits (63), Expect = 7.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 13 NLAKECGELVRERNKQKKKVEEKLNAVDLVTETDKEVEKRLIAGISE 59
N K GE+++E ++ +++E+ + + + E KE EK L + E
Sbjct: 162 NAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLRE 208
>gnl|CDD|212518 cd09992, HDAC_classII, Histone deacetylases and histone-like
deacetylases, classII. Class II histone deacetylases
are Zn-dependent enzymes that catalyze hydrolysis of
N(6)-acetyl-lysine residues of histones (EC 3.5.1.98)
and possibly other proteins to yield deacetylated
histones/other proteins. This group includes animal
HDAC4,5,6,7,8,9,10, fungal HOS3 and HDA1, plant HDA5 and
HDA15 as well as other eukaryotes, archaeal and
bacterial histone-like deacetylases. Eukaryotic
deacetylases mostly use histones (H2, H3, H4) as
substrates for deacetylation; however, non-histone
substrates are known (for example, tubulin). Substrates
for prokaryotic histone-like deacetylases are not known.
Histone acetylation/deacetylation process is important
for mediation of transcriptional regulation of many
genes. Histone deacetylases usually act via association
with DNA binding proteins to target specific chromatin
regions. Interaction partners of class II deacetylases
include 14-3-3 proteins, MEF2 family of transcriptional
factors, CtBP, calmodulin (CaM), SMRT, N-CoR, BCL6,
HP1alpha and SUMO. Histone deacetylases play a role in
the regulation of cell cycle, cell differentiation and
survival. Class II mammalian HDACs are differentially
inhibited by structurally diverse compounds with known
antitumor activities, thus presenting them as potential
drug targets for human diseases resulting from aberrant
acetylation.
Length = 291
Score = 27.5 bits (62), Expect = 9.2
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 131 TARKGCGAFHNGTRIHESETDSFVSSIRTAGSCVIAMALVASGGADA 177
T G G T + S+ +++ AG+ + A+ V SG A+
Sbjct: 52 TCEAGGGYLDPDTYVSP---GSYEAALLAAGAALAAVDAVLSGEAEN 95
>gnl|CDD|213833 TIGR03596, GTPase_YlqF, ribosome biogenesis GTP-binding protein
YlqF. Members of this protein family are GTP-binding
proteins involved in ribosome biogenesis, including the
essential YlqF protein of Bacillus subtilis, which is
an essential protein. They are related to Era, EngA,
and other GTPases of ribosome biogenesis, but are
circularly permuted. This family is not universal, and
is not present in Escherichia coli, and so is not as
well studied as some other GTPases. This model is built
for bacterial members [Protein synthesis, Other].
Length = 276
Score = 27.5 bits (62), Expect = 9.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 26 NKQKKKVEEKLNAVDLVTE 44
K +++++EKL VD+V E
Sbjct: 9 AKARREIKEKLKLVDVVIE 27
>gnl|CDD|237052 PRK12313, PRK12313, glycogen branching enzyme; Provisional.
Length = 633
Score = 27.9 bits (63), Expect = 9.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 51 KRLIAGISEKYPDHKFIGEESTA 73
++L + ++PD I EESTA
Sbjct: 343 QKLNEVVYLEHPDVLMIAEESTA 365
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.137 0.432
Gapped
Lambda K H
0.267 0.0854 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 16,621,121
Number of extensions: 1597840
Number of successful extensions: 1609
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1555
Number of HSP's successfully gapped: 78
Length of query: 324
Length of database: 10,937,602
Length adjustment: 97
Effective length of query: 227
Effective length of database: 6,635,264
Effective search space: 1506204928
Effective search space used: 1506204928
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (26.3 bits)