BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1002
         (136 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|189237014|ref|XP_967508.2| PREDICTED: similar to lethal (2) k14505 CG8674-PA [Tribolium
           castaneum]
          Length = 247

 Score =  146 bits (368), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 78/99 (78%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+  GIL S G YE++LD RKLKTP G LF V SEPLA+A+A EWD+Q E I +S M
Sbjct: 6   KRFYRNTGILRSEGKYEVTLDQRKLKTPKGNLFSVESEPLAIAVATEWDSQKENIIQSKM 65

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT +CNTVIDNPN LTK+D+V  I N+LDTDTIL+ AN
Sbjct: 66  HLTTLCNTVIDNPNNLTKYDMVDYITNYLDTDTILFQAN 104


>gi|270007362|gb|EFA03810.1| hypothetical protein TcasGA2_TC013923 [Tribolium castaneum]
          Length = 279

 Score =  145 bits (367), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 66/99 (66%), Positives = 78/99 (78%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+  GIL S G YE++LD RKLKTP G LF V SEPLA+A+A EWD+Q E I +S M
Sbjct: 38  KRFYRNTGILRSEGKYEVTLDQRKLKTPKGNLFSVESEPLAIAVATEWDSQKENIIQSKM 97

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT +CNTVIDNPN LTK+D+V  I N+LDTDTIL+ AN
Sbjct: 98  HLTTLCNTVIDNPNNLTKYDMVDYITNYLDTDTILFQAN 136


>gi|170036765|ref|XP_001846232.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Culex
           quinquefasciatus]
 gi|167879675|gb|EDS43058.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Culex
           quinquefasciatus]
          Length = 263

 Score =  140 bits (353), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/99 (62%), Positives = 79/99 (79%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+K GI+ SNG YEI+LD RKLKTP G  F V SEPLA+A+A EWDAQ ETI RS+M
Sbjct: 19  KRFYRKTGIISSNGRYEITLDQRKLKTPKGAPFYVESEPLAVAVATEWDAQKETIDRSSM 78

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLTA+ +TV+DNP+ L K D+V  ++N++ TD ILYH++
Sbjct: 79  HLTALSSTVLDNPSGLKKMDIVNYLVNYISTDAILYHSS 117


>gi|158299506|ref|XP_319622.4| AGAP008876-PA [Anopheles gambiae str. PEST]
 gi|157013551|gb|EAA14894.5| AGAP008876-PA [Anopheles gambiae str. PEST]
          Length = 270

 Score =  139 bits (349), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 81/100 (81%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY+  G++ SNG +EI+LD RKLKTP G+ F V SEPLA+AIA EWDAQ + I RS+
Sbjct: 28  PKRFYRNTGVISSNGRFEITLDSRKLKTPRGLPFYVESEPLAVAIAMEWDAQKDVIDRSS 87

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           MHLTA+ +TVIDNPN L K D+V  ++N+++TDT+L+H++
Sbjct: 88  MHLTALSSTVIDNPNSLQKHDMVNYLVNYINTDTVLFHSS 127


>gi|194760887|ref|XP_001962664.1| GF14321 [Drosophila ananassae]
 gi|190616361|gb|EDV31885.1| GF14321 [Drosophila ananassae]
          Length = 263

 Score =  138 bits (347), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 63/118 (53%), Positives = 82/118 (69%)

Query: 9   MRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEP 68
           MR+     ++ +C       PKRFYKK  +L S+G YE+ LDHRKLKTP G  F V SEP
Sbjct: 1   MRFVLYGTAVVTCHKRGTTPPKRFYKKTSVLSSDGGYEVVLDHRKLKTPKGTPFTVRSEP 60

Query: 69  LALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           LA+A+A E+DAQ E I+RS MHL+A+C T IDNPN L K D+V  ++NF+ TDT+L+ 
Sbjct: 61  LAIAVATEFDAQKEHIERSRMHLSALCFTAIDNPNNLNKLDMVNYLLNFIPTDTVLFQ 118


>gi|307173921|gb|EFN64669.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Camponotus
           floridanus]
          Length = 282

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 81/99 (81%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY++  IL S   +EI+LD RKLKTP G +F+V+S+PLALA+AAEWDAQ ETI R +M
Sbjct: 37  KRFYRRTNILSSGDKFEITLDQRKLKTPQGRVFEVNSKPLALAVAAEWDAQKETIDRGSM 96

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT++CNTV+DNP+  TK DLV +I+N L+ DTIL+H++
Sbjct: 97  HLTSLCNTVLDNPHNYTKIDLVNHIVNSLEMDTILFHSS 135


>gi|345480082|ref|XP_003424082.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Nasonia vitripennis]
          Length = 278

 Score =  137 bits (346), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/128 (54%), Positives = 96/128 (75%), Gaps = 7/128 (5%)

Query: 5   KQTTM---RYPRLINSIQSCKYSALEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGV 60
           K  TM   +Y ++++    C++ A    KRFY+K GIL SNGD YEI+LD ++LKTP G 
Sbjct: 3   KSVTMFSSKYRKIVSFPTQCRHMA--TVKRFYRKTGIL-SNGDKYEITLDQKRLKTPLGK 59

Query: 61  LFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDT 120
           +F+V S+PLALAIA EWD+Q + I R+ MHLTA+C+TVIDNPN+LTK D+   I+NFL+T
Sbjct: 60  VFEVKSKPLALAIAHEWDSQKDVINRNLMHLTALCSTVIDNPNKLTKQDIASYIVNFLET 119

Query: 121 DTILYHAN 128
           DT+L+ +N
Sbjct: 120 DTLLFQSN 127


>gi|157125234|ref|XP_001654255.1| hypothetical protein AaeL_AAEL010141 [Aedes aegypti]
 gi|108873688|gb|EAT37913.1| AAEL010141-PA [Aedes aegypti]
          Length = 269

 Score =  135 bits (340), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 76/100 (76%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY++ GI+ SNG +EI+LD RKLKTP G  F V SEPLA+AIA EWDAQ + I RS 
Sbjct: 27  PKRFYRQTGIITSNGKFEITLDQRKLKTPKGAPFFVESEPLAIAIATEWDAQKDVIDRSR 86

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           MHLTA+ +TVIDNPN L K D+V  ++N+  TD IL+ +N
Sbjct: 87  MHLTALSSTVIDNPNNLQKADIVNYLVNYASTDAILFQSN 126


>gi|380022849|ref|XP_003695248.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Apis florea]
          Length = 248

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 78/99 (78%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+K  IL S+G YEI+LD RKLKTP G +F+V S+PLALAIA EWD Q + I +S M
Sbjct: 5   KRFYRKTNILSSSGKYEITLDQRKLKTPQGKIFQVDSKPLALAIATEWDMQKQIIDKSNM 64

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLTA+CNTVIDNP+  TK D+V  I+N L+ DT+L+H++
Sbjct: 65  HLTALCNTVIDNPHNYTKEDMVNYIVNSLEMDTLLFHSS 103


>gi|195115557|ref|XP_002002323.1| GI17323 [Drosophila mojavensis]
 gi|193912898|gb|EDW11765.1| GI17323 [Drosophila mojavensis]
          Length = 278

 Score =  135 bits (339), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 59/98 (60%), Positives = 78/98 (79%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK   +L ++  YE++LDHRKLKTPNG LF V SEPLA+A+A E+DAQ E I+RS 
Sbjct: 36  PKRFYKTTNVLSTDSGYEVTLDHRKLKTPNGTLFTVKSEPLAIAVATEFDAQKEHIERSR 95

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MH++A+C T IDNPN+LTK D+V  ++NF+ TDT+L+ 
Sbjct: 96  MHISALCFTAIDNPNKLTKPDMVNYLLNFIATDTVLFQ 133


>gi|332016866|gb|EGI57675.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Acromyrmex
           echinatior]
          Length = 279

 Score =  134 bits (338), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 59/99 (59%), Positives = 81/99 (81%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY++  IL S   +E++LD RKLKTP G +F+V+S+PLALA+AAEWDAQ ETI R +M
Sbjct: 34  KRFYRRTNILSSGDKFEVTLDQRKLKTPQGRIFEVNSKPLALAVAAEWDAQKETIDRGSM 93

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT++CNTV+DNP+  TK DLV +I+N L+ DTIL++++
Sbjct: 94  HLTSLCNTVLDNPHNRTKIDLVNHIVNCLEIDTILFYSS 132


>gi|405952545|gb|EKC20343.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Crassostrea gigas]
          Length = 283

 Score =  134 bits (336), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 64/126 (50%), Positives = 91/126 (72%), Gaps = 1/126 (0%)

Query: 2   FVGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVL 61
            +G  T +R P+ IN     KY   E  K+FYK  GI+++ G +E++LD RKL+TP G L
Sbjct: 11  LIGTLTRIRKPKPINVCFIRKYKTGEL-KKFYKNAGIVQNQGWFEVNLDQRKLRTPTGNL 69

Query: 62  FKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTD 121
           F+V SEPLALAIA EW++Q ETI+R  MHLT + NTV+DNP + ++ D+V+ +++FL+TD
Sbjct: 70  FQVPSEPLALAIATEWNSQKETIKRQAMHLTTLSNTVLDNPMQRSRGDIVRGVLHFLETD 129

Query: 122 TILYHA 127
           TILY +
Sbjct: 130 TILYRS 135


>gi|110761779|ref|XP_397155.3| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Apis mellifera]
          Length = 247

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 78/99 (78%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+K  IL S+G YEI+LD RKLKTP G +F+V S+PLALA+A EWD Q + I +S M
Sbjct: 5   KRFYRKTNILSSSGKYEITLDQRKLKTPQGKIFQVDSKPLALAVATEWDMQKQIIDKSNM 64

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLTA+CNTVIDNP+  TK D+V  I++ L+ DT+L+H+N
Sbjct: 65  HLTALCNTVIDNPHNHTKEDMVNYIVSSLEMDTLLFHSN 103


>gi|195352075|ref|XP_002042540.1| GM23405 [Drosophila sechellia]
 gi|194124409|gb|EDW46452.1| GM23405 [Drosophila sechellia]
          Length = 279

 Score =  132 bits (331), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 66/128 (51%), Positives = 85/128 (66%), Gaps = 9/128 (7%)

Query: 7   TTMRYPRLINSIQSCKYSA--------LEKPKRFYKKVGILESNGDYEISLDHRKLKTPN 58
           + +R  RL N  Q CK +A           PKRFYKK  +L  +  YE+ LDHRKLKTP 
Sbjct: 8   SAIRALRLTNFSQ-CKGAASSFTVRHYASPPKRFYKKTSVLSGDSGYEVVLDHRKLKTPK 66

Query: 59  GVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFL 118
           G  F V SEPLA+A+A E+DAQ E I+RS MHL+A+C T IDNPN L+K D+V  ++NF+
Sbjct: 67  GTPFIVRSEPLAIAVATEFDAQKENIERSRMHLSALCFTAIDNPNHLSKLDMVNYLLNFI 126

Query: 119 DTDTILYH 126
            TDT+L+ 
Sbjct: 127 GTDTVLFQ 134


>gi|24585626|ref|NP_610102.1| lethal (2) k14505, isoform A [Drosophila melanogaster]
 gi|442628754|ref|NP_001260668.1| lethal (2) k14505, isoform B [Drosophila melanogaster]
 gi|7298774|gb|AAF53985.1| lethal (2) k14505, isoform A [Drosophila melanogaster]
 gi|440214037|gb|AGB93203.1| lethal (2) k14505, isoform B [Drosophila melanogaster]
          Length = 279

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 66/128 (51%), Positives = 85/128 (66%), Gaps = 9/128 (7%)

Query: 7   TTMRYPRLINSIQSCKYSA--------LEKPKRFYKKVGILESNGDYEISLDHRKLKTPN 58
           + +R  RL N  Q CK +A           PKRFYKK  +L  +  YE+ LDHRKLKTP 
Sbjct: 8   SAIRALRLTNFSQ-CKGAASSFTVRHYASPPKRFYKKTSVLSGDSGYEVVLDHRKLKTPK 66

Query: 59  GVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFL 118
           G  F V SEPLA+A+A E+DAQ E I+RS MHL+A+C T IDNPN L+K D+V  ++NF+
Sbjct: 67  GTPFIVRSEPLAIAVATEFDAQKENIERSRMHLSALCFTAIDNPNHLSKLDMVNYLLNFI 126

Query: 119 DTDTILYH 126
            TDT+L+ 
Sbjct: 127 ATDTVLFQ 134


>gi|195443388|ref|XP_002069399.1| GK18733 [Drosophila willistoni]
 gi|194165484|gb|EDW80385.1| GK18733 [Drosophila willistoni]
          Length = 278

 Score =  132 bits (331), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 77/98 (78%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYKK  +L ++  YEI+LDHRKLKTP G LF V SEPLA+A+A E+D+Q E I+RS 
Sbjct: 36  PKRFYKKTSVLCTDNGYEITLDHRKLKTPKGTLFTVKSEPLAIAVATEFDSQKEHIERSR 95

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MHL+A+C T +DNPN L+K D+V  ++NF+ TDT+L+ 
Sbjct: 96  MHLSALCFTALDNPNNLSKLDMVNYLLNFIATDTVLFQ 133


>gi|383850317|ref|XP_003700742.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Megachile rotundata]
          Length = 250

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 61/99 (61%), Positives = 76/99 (76%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY++  IL S G +EI+LD RKLKTP G + +V S+PLALAIA EWD Q E I +S+M
Sbjct: 5   KRFYRRTNILSSGGKFEITLDQRKLKTPQGKILQVDSKPLALAIAVEWDMQKEIIDKSSM 64

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLTA+ NTVIDNPN  TK D+V  I+N L+ DTIL+H+N
Sbjct: 65  HLTALSNTVIDNPNNHTKQDIVNYIVNCLEMDTILFHSN 103


>gi|195580637|ref|XP_002080141.1| GD24313 [Drosophila simulans]
 gi|194192150|gb|EDX05726.1| GD24313 [Drosophila simulans]
          Length = 279

 Score =  131 bits (329), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 74/98 (75%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYKK  +L  +  YE+ LDHRKLKTP G  F V SEPLA+A+A E+DAQ E I+RS 
Sbjct: 37  PKRFYKKTSVLSGDSGYEVVLDHRKLKTPKGTPFIVRSEPLAIAVATEFDAQKENIERSR 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MHL+A+C T IDNPN L+K D+V  ++NF+ TDT+L+ 
Sbjct: 97  MHLSALCFTAIDNPNHLSKLDMVNYLLNFIGTDTVLFQ 134


>gi|195030258|ref|XP_001987985.1| GH10814 [Drosophila grimshawi]
 gi|193903985|gb|EDW02852.1| GH10814 [Drosophila grimshawi]
          Length = 279

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 57/98 (58%), Positives = 77/98 (78%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK   +L ++  YE++LDHRKLKTPNG LF V SEPLA+A+A E+D+Q + I+RS 
Sbjct: 37  PKRFYKTTNVLCTDAGYEVTLDHRKLKTPNGTLFTVKSEPLAIAVATEFDSQKDHIERSR 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MH++A+C T IDNPN+LTK D+V  ++NF  TDT+L+ 
Sbjct: 97  MHISALCFTAIDNPNKLTKTDMVNYLLNFAATDTVLFQ 134


>gi|195475920|ref|XP_002090231.1| GE12909 [Drosophila yakuba]
 gi|194176332|gb|EDW89943.1| GE12909 [Drosophila yakuba]
          Length = 279

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 57/98 (58%), Positives = 74/98 (75%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYKK  +L  +  YE+ LDHRKLKTP G  F V SEPLA+A+A E+DAQ + I+RS 
Sbjct: 37  PKRFYKKTSVLSGDSGYEVVLDHRKLKTPKGAPFVVRSEPLAIAVATEFDAQKQNIERSR 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MHL+A+C T IDNPN L+K D+V  ++NF+ TDT+L+ 
Sbjct: 97  MHLSALCFTAIDNPNHLSKLDMVNYLLNFIGTDTVLFQ 134


>gi|20151503|gb|AAM11111.1| GM08665p [Drosophila melanogaster]
          Length = 279

 Score =  130 bits (326), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 65/128 (50%), Positives = 84/128 (65%), Gaps = 9/128 (7%)

Query: 7   TTMRYPRLINSIQSCKYSA--------LEKPKRFYKKVGILESNGDYEISLDHRKLKTPN 58
           + +R  RL N  Q CK +A           PKRFYKK  +   +  YE+ LDHRKLKTP 
Sbjct: 8   SVIRALRLTNFSQ-CKGAASSFTVRHYASPPKRFYKKTSVASGDSGYEVVLDHRKLKTPK 66

Query: 59  GVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFL 118
           G  F V SEPLA+A+A E+DAQ E I+RS MHL+A+C T IDNPN L+K D+V  ++NF+
Sbjct: 67  GTPFIVRSEPLAIAVATEFDAQKENIERSRMHLSALCFTAIDNPNHLSKLDMVNYLLNFI 126

Query: 119 DTDTILYH 126
            TDT+L+ 
Sbjct: 127 ATDTVLFQ 134


>gi|195385587|ref|XP_002051486.1| GJ15919 [Drosophila virilis]
 gi|194147943|gb|EDW63641.1| GJ15919 [Drosophila virilis]
          Length = 269

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 76/98 (77%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK   +L ++  YE++LDHRKLKTPNG  F V SEPLA+A+A E+D Q + I+RS 
Sbjct: 27  PKRFYKTTNVLCTDAGYEVTLDHRKLKTPNGAPFMVKSEPLAIAVATEFDGQKDHIERSR 86

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MH++A+C T IDNPN+LTK D+V  ++NF+ TDT+L+ 
Sbjct: 87  MHISALCFTAIDNPNKLTKLDMVNYLLNFVATDTVLFQ 124


>gi|321479178|gb|EFX90134.1| hypothetical protein DAPPUDRAFT_39815 [Daphnia pulex]
          Length = 252

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 60/95 (63%), Positives = 78/95 (82%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYKKV  ++SN D+EI LD+RKLKTP G +F+VSSEPLALA+A EWDAQ E I  S+M
Sbjct: 11  KRFYKKVSTVQSNKDFEIILDNRKLKTPAGSVFRVSSEPLALAVANEWDAQEEKILVSSM 70

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTIL 124
           HLT++ NT++DNPN+L K D+V +I+ +LD DT+L
Sbjct: 71  HLTSLVNTILDNPNKLRKQDIVCHILTYLDNDTLL 105


>gi|350424249|ref|XP_003493734.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Bombus impatiens]
          Length = 268

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 75/98 (76%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           +RFY+K  IL  +G +EI+LD RKLKTP G + +V S+PLALAIA EWD Q   I RS+M
Sbjct: 23  RRFYRKTNILLCDGKFEITLDQRKLKTPQGKILQVESKPLALAIATEWDMQKNIIDRSSM 82

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           HLTA+CNTVIDNPN  TK D+  +I+N L+ DT+L+H+
Sbjct: 83  HLTALCNTVIDNPNNHTKQDMANHIVNCLEMDTVLFHS 120


>gi|340723220|ref|XP_003399991.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Bombus terrestris]
          Length = 268

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 58/98 (59%), Positives = 75/98 (76%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           +RFY+K  IL  +G +EI+LD RKLKTP G + +V S+PLALAIA EWD Q + I RS+M
Sbjct: 23  RRFYRKTNILLCDGKFEITLDQRKLKTPQGKILQVESKPLALAIATEWDMQKDIIDRSSM 82

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           HLTA+CNTVIDNPN  TK D+   I+N L+ DT+L+H+
Sbjct: 83  HLTALCNTVIDNPNNHTKQDMANYIVNCLEMDTVLFHS 120


>gi|194878355|ref|XP_001974046.1| GG21292 [Drosophila erecta]
 gi|190657233|gb|EDV54446.1| GG21292 [Drosophila erecta]
          Length = 279

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 57/98 (58%), Positives = 74/98 (75%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYKK  +L  +  YE+ LDHRKLKTP G  F V SEPLA+A+A E+DAQ + I+RS 
Sbjct: 37  PKRFYKKTSVLSGDSGYEVVLDHRKLKTPKGAAFVVRSEPLAIAVATEFDAQKQNIERSR 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MHL+A+C T IDNPN L+K D+V  ++NF+ TDT+L+ 
Sbjct: 97  MHLSALCFTAIDNPNHLSKPDMVNYLLNFIGTDTVLFQ 134


>gi|195161709|ref|XP_002021704.1| GL26360 [Drosophila persimilis]
 gi|194103504|gb|EDW25547.1| GL26360 [Drosophila persimilis]
          Length = 278

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 75/98 (76%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYKK  +L ++G YE+ LDHRKLKTP G  F V SEPLA+A+A E+D+Q + I+RS 
Sbjct: 36  PKRFYKKTSVLYTDGGYEVVLDHRKLKTPKGAPFTVKSEPLAIAVATEFDSQRDHIERSR 95

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MHL+A+C T IDNPN L K D+V  ++N++ TDT+L+ 
Sbjct: 96  MHLSALCFTAIDNPNNLNKLDMVNYLLNYMPTDTVLFQ 133


>gi|125984652|ref|XP_001356090.1| GA21252 [Drosophila pseudoobscura pseudoobscura]
 gi|54644408|gb|EAL33149.1| GA21252 [Drosophila pseudoobscura pseudoobscura]
          Length = 278

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 75/98 (76%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYKK  +L ++G YE+ LDHRKLKTP G  F V SEPLA+A+A E+D+Q + I+RS 
Sbjct: 36  PKRFYKKTSVLYTDGGYEVVLDHRKLKTPKGAPFTVKSEPLAIAVATEFDSQRDHIERSR 95

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           MHL+A+C T IDNPN L K D+V  ++N++ TDT+L+ 
Sbjct: 96  MHLSALCFTAIDNPNNLNKLDMVNYLLNYMPTDTVLFQ 133


>gi|322786574|gb|EFZ12969.1| hypothetical protein SINV_00497 [Solenopsis invicta]
          Length = 249

 Score =  125 bits (313), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 79/99 (79%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY++  I+ S   +E++LD RKLKTP G +F+V+S+ LALA+AAEWDAQ + I R +M
Sbjct: 5   KRFYRRTNIISSGDKFEVTLDQRKLKTPQGRIFEVNSKSLALAVAAEWDAQKDIIDRGSM 64

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT++CNTV+DNP+  +K DLV +I+N L+ DTIL++++
Sbjct: 65  HLTSLCNTVLDNPHNHSKIDLVNHIVNCLEMDTILFYSS 103


>gi|149758235|ref|XP_001489232.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Equus caballus]
          Length = 289

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 78/114 (68%), Gaps = 4/114 (3%)

Query: 12  PRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLAL 71
           PRL    Q+  Y+ L + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+
Sbjct: 33  PRL----QARAYAPLTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAI 88

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           A+A EWD+Q +TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 89  AVATEWDSQQDTIKFYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|348560289|ref|XP_003465946.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cavia porcellus]
          Length = 289

 Score =  124 bits (310), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 74/103 (71%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+QH+
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQHD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP + +K  ++Q  + FLDTDTI Y
Sbjct: 100 TIKFYTMHLTTLCNTSLDNPTQRSKDQVIQAAVKFLDTDTICY 142


>gi|332375412|gb|AEE62847.1| unknown [Dendroctonus ponderosae]
          Length = 242

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/92 (60%), Positives = 71/92 (77%)

Query: 37  GILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICN 96
            IL+S+G +EI+LD RKLKTP G  F V +EPLALA+A EW++Q   I +S MH+T +CN
Sbjct: 8   SILKSDGKFEITLDQRKLKTPKGSPFLVDTEPLALAVATEWNSQKGKIVQSKMHITTLCN 67

Query: 97  TVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TV+DNPN LTK D+V  I+N LDTDT+LY AN
Sbjct: 68  TVLDNPNNLTKLDIVNYIVNCLDTDTVLYQAN 99


>gi|410980047|ref|XP_003996392.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Felis catus]
          Length = 289

 Score =  122 bits (305), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 73/106 (68%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TI+  TMHLT +CNT +DNP +  K  L+Q  + FLDTDTI Y  +
Sbjct: 100 TIKFYTMHLTTLCNTSLDNPTQRNKDQLIQAAVKFLDTDTICYRVD 145


>gi|242007937|ref|XP_002424771.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Pediculus humanus corporis]
 gi|212508294|gb|EEB12033.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Pediculus humanus corporis]
          Length = 239

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 57/88 (64%), Positives = 68/88 (77%)

Query: 38  ILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNT 97
           IL + G YE++LD RKLKTP G LF V SEPLALA+AAEWD Q   I  S+MHLT +C T
Sbjct: 4   ILFNEGKYEVTLDQRKLKTPKGKLFYVESEPLALAVAAEWDRQKTNIVPSSMHLTGLCYT 63

Query: 98  VIDNPNRLTKFDLVQNIINFLDTDTILY 125
           V+DNPN+ TK ++V NII +LDTDTILY
Sbjct: 64  VLDNPNKFTKEEIVNNIIKYLDTDTILY 91


>gi|417398408|gb|JAA46237.1| Putative f1-atp synthase assembly protein [Desmodus rotundus]
          Length = 289

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 73/106 (68%)

Query: 20  SCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           S  Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+
Sbjct: 37  SRAYAPPAERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDS 96

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           Q +TI+  TMHLT +CNT +DNP +  K  L+Q  + FLDTDTI Y
Sbjct: 97  QQDTIKFYTMHLTTLCNTSLDNPTQRNKDQLIQAAVKFLDTDTICY 142


>gi|115497412|ref|NP_001069091.1| ATP synthase mitochondrial F1 complex assembly factor 2 precursor
           [Bos taurus]
 gi|119367813|sp|Q1LZ96.1|ATPF2_BOVIN RecName: Full=ATP synthase mitochondrial F1 complex assembly factor
           2; Flags: Precursor
 gi|94534775|gb|AAI16132.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Bos
           taurus]
 gi|296476577|tpg|DAA18692.1| TPA: ATP synthase mitochondrial F1 complex assembly factor 2
           precursor [Bos taurus]
 gi|440907897|gb|ELR57985.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Bos
           grunniens mutus]
          Length = 289

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 2/117 (1%)

Query: 12  PRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLAL 71
           P+L   I++  Y    + KRFY+ V I +  G +EI+LDHRKL+TP G LF V SE LA+
Sbjct: 31  PKLPTPIRA--YVPPAERKRFYQNVSISQGEGGFEINLDHRKLRTPQGKLFTVPSEALAI 88

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           A+A EWD+Q +TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDT+ Y   
Sbjct: 89  AVATEWDSQQDTIKMYTMHLTTLCNTSLDNPTQRDKDQLIRAAVKFLDTDTVCYRVE 145


>gi|296201164|ref|XP_002747923.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Callithrix jacchus]
          Length = 287

 Score =  121 bits (303), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/100 (55%), Positives = 72/100 (72%)

Query: 26  LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           L++ KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+
Sbjct: 41  LKERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIK 100

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
             TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 101 YYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 140


>gi|334332668|ref|XP_001379272.2| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Monodelphis domestica]
          Length = 439

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 73/102 (71%)

Query: 24  SALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           S  ++ K+FY+ V I +  G YEI+LDHRKLKTPN  LF V SE LA+A+A EWD+Q +T
Sbjct: 191 SHAQQRKKFYQNVSITQGEGGYEINLDHRKLKTPNARLFTVPSEALAVAVATEWDSQQDT 250

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           I+  TMHLT +CNT +DNP++  K  L+   + FLDTDTI Y
Sbjct: 251 IKFYTMHLTTLCNTSLDNPSQRNKDQLIHASMKFLDTDTICY 292


>gi|344298048|ref|XP_003420706.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Loxodonta africana]
          Length = 289

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA A+A EWD+Q +
Sbjct: 40  YAPPAERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALATAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP + +K  L+Q  + FLDTDTI Y
Sbjct: 100 TIKFYTMHLTTLCNTSLDNPTQRSKDQLIQAALKFLDTDTICY 142


>gi|297700220|ref|XP_002827155.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Pongo abelii]
          Length = 289

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|114668880|ref|XP_001159122.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           isoform 2 [Pan troglodytes]
 gi|410209666|gb|JAA02052.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
 gi|410258268|gb|JAA17101.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
 gi|410290454|gb|JAA23827.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
 gi|410351925|gb|JAA42566.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pan
           troglodytes]
          Length = 289

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|21735485|ref|NP_663729.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Homo
           sapiens]
 gi|73917623|sp|Q8N5M1.1|ATPF2_HUMAN RecName: Full=ATP synthase mitochondrial F1 complex assembly factor
           2; AltName: Full=ATP12 homolog; Flags: Precursor
 gi|21594781|gb|AAH32126.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Homo
           sapiens]
 gi|33991163|gb|AAH04114.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Homo
           sapiens]
 gi|117645306|emb|CAL38119.1| hypothetical protein [synthetic construct]
 gi|119576084|gb|EAW55680.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_e [Homo sapiens]
 gi|158261537|dbj|BAF82946.1| unnamed protein product [Homo sapiens]
 gi|261859430|dbj|BAI46237.1| ATP synthase mitochondrial F1 complex assembly factor 2 [synthetic
           construct]
          Length = 289

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|291415904|ref|XP_002724189.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oryctolagus cuniculus]
          Length = 282

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP    F V SE LA+A+A EW++Q +
Sbjct: 33  YAPPTERKRFYQNVSISQGEGGFEINLDHRKLKTPQAKFFTVPSEALAIAVATEWESQQD 92

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP + +K  L+Q  I FLDTDTI Y
Sbjct: 93  TIKSYTMHLTTLCNTSLDNPTQRSKDQLIQAAIKFLDTDTICY 135


>gi|426349212|ref|XP_004042207.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Gorilla gorilla gorilla]
          Length = 289

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|397474779|ref|XP_003808838.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Pan paniscus]
          Length = 289

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|119576081|gb|EAW55677.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_b [Homo sapiens]
          Length = 169

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/104 (52%), Positives = 72/104 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y 
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYR 143


>gi|395836284|ref|XP_003791088.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Otolemur garnettii]
          Length = 290

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 41  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 100

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 101 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 143


>gi|291416212|ref|XP_002724341.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oryctolagus cuniculus]
          Length = 282

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 73/103 (70%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EW++Q +
Sbjct: 33  YAPPTERKRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWESQQD 92

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP + +K  L++  I FLDTDTI Y
Sbjct: 93  TIKSYTMHLTTLCNTSLDNPTQRSKDQLIRAAIKFLDTDTICY 135


>gi|431914507|gb|ELK15757.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Pteropus
           alecto]
          Length = 289

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 73/106 (68%)

Query: 20  SCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           S  Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+
Sbjct: 37  SRAYAPPAERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDS 96

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           Q +TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 97  QQDTIKFYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|403275458|ref|XP_003929460.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Saimiri boliviensis boliviensis]
          Length = 263

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 69/96 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 21  KRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKYYTM 80

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 81  HLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 116


>gi|395514246|ref|XP_003761330.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Sarcophilus harrisii]
          Length = 295

 Score =  120 bits (300), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 73/103 (70%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + K+FY+ V I +    YEI+LDHRKLKTPN  LF V SE LA+A+A EWD+Q +
Sbjct: 46  YAPPAERKKFYQNVSITQGENGYEINLDHRKLKTPNAKLFTVPSEALAVAVATEWDSQQD 105

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP++  K  L+Q  + FLDTDTI Y
Sbjct: 106 TIKFYTMHLTTLCNTSLDNPSQRNKDQLIQASMKFLDTDTICY 148


>gi|345800104|ref|XP_546658.2| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Canis lupus familiaris]
          Length = 257

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 8   YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 67

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 68  TIKFYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 110


>gi|301775511|ref|XP_002923170.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Ailuropoda melanoleuca]
          Length = 289

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKFYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|327289766|ref|XP_003229595.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Anolis carolinensis]
          Length = 289

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/103 (53%), Positives = 74/103 (71%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LALA+A EWD+Q +
Sbjct: 40  YTPQAERKRFYQNVTISQGEGGFEINLDHRKLKTPQAKLFTVPSETLALAVATEWDSQRD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP++ TK  +++  + FL+TDTI Y
Sbjct: 100 TIKPYTMHLTTLCNTALDNPSQRTKDQIIRAALKFLETDTICY 142


>gi|238776839|ref|NP_663402.2| ATP synthase mitochondrial F1 complex assembly factor 2 [Mus
           musculus]
 gi|26347325|dbj|BAC37311.1| unnamed protein product [Mus musculus]
          Length = 298

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 70/99 (70%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 56  KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 115

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT +CNT +DNP + +K  L++  + FLDTDTI Y   
Sbjct: 116 HLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTICYRVE 154


>gi|73917624|sp|Q91YY4.1|ATPF2_MOUSE RecName: Full=ATP synthase mitochondrial F1 complex assembly factor
           2; Flags: Precursor
 gi|15488961|gb|AAH13607.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Mus
           musculus]
 gi|148694660|gb|EDL26607.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_c [Mus musculus]
          Length = 289

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 70/99 (70%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 47  KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 106

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT +CNT +DNP + +K  L++  + FLDTDTI Y   
Sbjct: 107 HLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTICYRVE 145


>gi|281340456|gb|EFB16040.1| hypothetical protein PANDA_012272 [Ailuropoda melanoleuca]
          Length = 246

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 69/96 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 4   KRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 63

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 64  HLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 99


>gi|426238917|ref|XP_004013383.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Ovis aries]
          Length = 341

 Score =  119 bits (297), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 52/97 (53%), Positives = 70/97 (72%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           K+FY+ V I +  G +EI+LDHRKL+TP G LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 47  KKFYQNVSISQGEGGFEINLDHRKLRTPQGKLFTVPSEALAIAVATEWDSQQDTIKMYTM 106

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           HLT +CNT +DNP +  K  L++  + FLDTDT+ Y 
Sbjct: 107 HLTTLCNTSLDNPTQRDKDQLIRAAVKFLDTDTVCYR 143


>gi|157822047|ref|NP_001100476.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Rattus
           norvegicus]
 gi|149052829|gb|EDM04646.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_c [Rattus norvegicus]
          Length = 298

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 69/99 (69%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 56  KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 115

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT +CNT +DNP +  K  L++  + FLDTDTI Y   
Sbjct: 116 HLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYRVE 154


>gi|50755603|ref|XP_414815.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Gallus gallus]
          Length = 281

 Score =  118 bits (296), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 53/103 (51%), Positives = 72/103 (69%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 32  YAPPAERKRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQKD 91

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FL+TDT+ Y
Sbjct: 92  TIKFYTMHLTTLCNTALDNPTQRNKVQLIRAAVKFLETDTVCY 134


>gi|148694659|gb|EDL26606.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_b [Mus musculus]
          Length = 145

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 70/96 (72%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 47  KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 106

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP + +K  L++  + FLDTDTI +
Sbjct: 107 HLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTIWW 142


>gi|354467882|ref|XP_003496397.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cricetulus griseus]
          Length = 248

 Score =  118 bits (295), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 69/96 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 4   KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 63

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP +  K  +++  + FLDTDTI Y
Sbjct: 64  HLTTLCNTSLDNPTQRNKDQMIRAAVKFLDTDTICY 99


>gi|355670858|gb|AER94817.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Mustela
           putorius furo]
          Length = 243

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 53/96 (55%), Positives = 69/96 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 2   KRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYTM 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP +  K  L++  + FLDTDT+ Y
Sbjct: 62  HLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTLCY 97


>gi|149052827|gb|EDM04644.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 154

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 57/123 (46%), Positives = 77/123 (62%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
           +G  T   +P       +  Y    + KRFY+ V I +  G +EI+LDHRKLKTP   LF
Sbjct: 29  LGDPTVSLWPGPALRPPARAYVPPTERKRFYQNVSISQGEGGFEINLDHRKLKTPQAKLF 88

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            V SE LA+A+A EWD+Q +TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDT
Sbjct: 89  TVPSEALAIAVATEWDSQQDTIKFYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDT 148

Query: 123 ILY 125
           I +
Sbjct: 149 IWW 151


>gi|332261715|ref|XP_003279913.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Nomascus leucogenys]
          Length = 289

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/103 (51%), Positives = 71/103 (68%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   L  + SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLLTIPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|355753814|gb|EHH57779.1| ATP12-like protein [Macaca fascicularis]
          Length = 289

 Score =  117 bits (293), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 71/103 (68%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LD RKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDQRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|383872844|ref|NP_001244880.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Macaca
           mulatta]
 gi|402898947|ref|XP_003912468.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Papio anubis]
 gi|355568303|gb|EHH24584.1| ATP12-like protein [Macaca mulatta]
 gi|380788887|gb|AFE66319.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Macaca
           mulatta]
 gi|383409983|gb|AFH28205.1| ATP synthase mitochondrial F1 complex assembly factor 2 precursor
           [Macaca mulatta]
          Length = 289

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 71/103 (68%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LD RKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDQRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           TI+  TMHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 100 TIKYYTMHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 142


>gi|345310248|ref|XP_001520540.2| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Ornithorhynchus anatinus]
          Length = 289

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 72/100 (72%)

Query: 26  LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           L + K+FY+ V I    G +EI+LDHRKL+TP   LF V SE LA+A+A EWD+Q +TI+
Sbjct: 43  LSERKKFYQNVSITRGEGGFEINLDHRKLRTPQAKLFTVPSEALAIAVATEWDSQQDTIK 102

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
             TMHLT +CNT +DNP++ +K  L++  + FLDTDT+ Y
Sbjct: 103 FYTMHLTTLCNTSLDNPSQRSKDQLIRAAVKFLDTDTVCY 142


>gi|449281381|gb|EMC88461.1| ATP synthase mitochondrial F1 complex assembly factor 2, partial
           [Columba livia]
          Length = 245

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 69/96 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 3   KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQKDTIKFYTM 62

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP +  K  L++  + FL+TDT+ Y
Sbjct: 63  HLTTLCNTALDNPTQRNKTQLIRAAVKFLETDTVCY 98


>gi|326929025|ref|XP_003210672.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Meleagris gallopavo]
          Length = 307

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 69/96 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 65  KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQKDTIKFYTM 124

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP +  K  L++  + FL+TDT+ Y
Sbjct: 125 HLTTLCNTALDNPTQRNKVQLIRAAVKFLETDTLCY 160


>gi|224070283|ref|XP_002188414.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Taeniopygia guttata]
          Length = 255

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 69/96 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 13  KRFYQNVSISQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQKDTIKFYTM 72

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +CNT +DNP +  K  L++  + FL+TDT+ Y
Sbjct: 73  HLTTLCNTALDNPTQRNKTQLIRAAVKFLETDTVCY 108


>gi|390352014|ref|XP_003727794.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Strongylocentrotus purpuratus]
          Length = 300

 Score =  115 bits (289), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 56/104 (53%), Positives = 76/104 (73%), Gaps = 2/104 (1%)

Query: 23  YSALEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           YS  EK KRFYK V I +S    +EI+LD RKLKTP+G    + +E LA+A+A EWD QH
Sbjct: 51  YSGREK-KRFYKNVSITQSGSKAFEINLDQRKLKTPSGQPLVIPTESLAVAVATEWDTQH 109

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           E I++ +MHLTA+CNTV+DNP   TK  +++ +++FL+TDTI Y
Sbjct: 110 EFIKQHSMHLTALCNTVLDNPTHRTKAQIIRAMLHFLETDTICY 153


>gi|317419180|emb|CBN81217.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dicentrarchus labrax]
          Length = 284

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 58/117 (49%), Positives = 79/117 (67%), Gaps = 2/117 (1%)

Query: 11  YPRLINSIQSCKYS-ALEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEP 68
           +PR  +   + KYS A  + KRFY+ V I +  G  YE++LD RKLKTP G LF V +E 
Sbjct: 21  WPRSQHCPLALKYSTATAERKRFYQDVSISQGEGGLYEVNLDKRKLKTPGGKLFTVPNEA 80

Query: 69  LALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           LA+A+A EWDAQ +T++  TMHLT +CNT +DNP + TK  ++   + FL+TDTI Y
Sbjct: 81  LAIAVATEWDAQRDTLKFYTMHLTTLCNTALDNPTQRTKDQMISAALKFLETDTICY 137


>gi|307211938|gb|EFN87852.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Harpegnathos saltator]
          Length = 228

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 51/80 (63%), Positives = 65/80 (81%)

Query: 49  LDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKF 108
           LD RKLKTP G +F+V+S+PLALA+AAEWDAQ E I R  MHLTA+CNTV+DNP   TK 
Sbjct: 2   LDQRKLKTPQGKIFEVNSKPLALAVAAEWDAQKEIIDRGNMHLTALCNTVLDNPQNCTKV 61

Query: 109 DLVQNIINFLDTDTILYHAN 128
           DLV NI+N L+ DT+L++++
Sbjct: 62  DLVNNIVNCLEMDTVLFYSS 81


>gi|130486179|ref|NP_001076290.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Danio
           rerio]
 gi|126632152|gb|AAI34168.1| Atpaf2 protein [Danio rerio]
 gi|157422746|gb|AAI53514.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Danio
           rerio]
          Length = 291

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 2/116 (1%)

Query: 12  PRLINSIQSCKYS-ALEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPL 69
           P L   +Q  KYS A  + K+FY+ V I +  G  +EI+LD RKLKTP+G LF V +E L
Sbjct: 29  PSLSTQLQKAKYSSATAERKKFYETVSITQGEGGLFEINLDKRKLKTPSGKLFTVPNEAL 88

Query: 70  ALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           A+A+A EWD Q +T++  TMHLT +CNT +DNP + TK  ++   + FL+TDTI Y
Sbjct: 89  AIAVANEWDVQKDTLKFYTMHLTTLCNTALDNPTQRTKEQMISAALKFLETDTICY 144


>gi|348502431|ref|XP_003438771.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oreochromis niloticus]
          Length = 285

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 2/109 (1%)

Query: 22  KYSAL-EKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           +YSA   + KRFY+ V I +S G  YEI+LD RKLKTP G LF V +E LA+A+A EWDA
Sbjct: 33  RYSAATAERKRFYQDVSISQSEGGLYEINLDQRKLKTPGGKLFTVPNEALAIAVATEWDA 92

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           Q +T++  TMHLT +CNT +DNP + +K  ++   + FL+TDTI Y  +
Sbjct: 93  QRDTLKFYTMHLTTLCNTALDNPTQRSKEQMITAALKFLETDTICYRVD 141


>gi|47226088|emb|CAG04462.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 284

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 6/122 (4%)

Query: 13  RLINSIQSC----KYS-ALEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSS 66
           RL++  QSC    KYS A  + KRFY+ V I +  G  +EI+LD RKLKTP G LF V +
Sbjct: 19  RLLSRNQSCHFDLKYSTAASERKRFYQDVTISQGEGGLFEINLDRRKLKTPGGKLFTVPN 78

Query: 67  EPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           E LA+A+A EWDAQ +T++  TMHLT +CNT +DNP +  K  ++   + FL+TDT+ Y 
Sbjct: 79  EALAIAVATEWDAQKDTLKFYTMHLTTLCNTALDNPTQRNKDQMITAALKFLETDTVCYR 138

Query: 127 AN 128
            +
Sbjct: 139 VD 140


>gi|242002306|ref|XP_002435796.1| hypothetical protein IscW_ISCW019217 [Ixodes scapularis]
 gi|215499132|gb|EEC08626.1| hypothetical protein IscW_ISCW019217 [Ixodes scapularis]
          Length = 355

 Score =  112 bits (280), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/98 (52%), Positives = 70/98 (71%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K VGI++S G +E+ LD RKLKTP G  F V +E LA+A+A EWDAQ + I + 
Sbjct: 136 KRKRFFKNVGIVKSEGKFEVCLDQRKLKTPLGNHFTVPNEALAVAVATEWDAQLKEINQH 195

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            MHLT +CNTV+DNP+  T+  L   I+ FL++DT+ +
Sbjct: 196 EMHLTTLCNTVLDNPSHKTEESLAAEILEFLESDTVWH 233



 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 49/70 (70%)

Query: 26 LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
          L K KRF+K VGI++S G +E+ LD RKLKTP G  F V +E LA+A+A EWDAQ + I 
Sbjct: 30 LAKRKRFFKNVGIVKSEGKFEVCLDQRKLKTPLGNHFTVPNEALAVAVATEWDAQLKEIN 89

Query: 86 RSTMHLTAIC 95
          +  MHL  IC
Sbjct: 90 QHEMHLETIC 99


>gi|432921540|ref|XP_004080197.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Oryzias latipes]
          Length = 287

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 74/106 (69%), Gaps = 2/106 (1%)

Query: 22  KYS-ALEKPKRFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           KYS A  + KRFY+ V I + + G YEI+LD RKLKTP G LF V +E LA+A+A EWDA
Sbjct: 35  KYSTASTERKRFYQDVSISQGDDGLYEINLDRRKLKTPGGKLFTVPNEALAIAVATEWDA 94

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           Q  T++  TMHLT +CNT +DNP +  K  ++ + + FL+TDTI Y
Sbjct: 95  QRGTLKFYTMHLTTLCNTALDNPTQRNKEQMINSALKFLETDTICY 140


>gi|410896117|ref|XP_003961546.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Takifugu rubripes]
          Length = 285

 Score =  110 bits (275), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 53/116 (45%), Positives = 76/116 (65%), Gaps = 6/116 (5%)

Query: 19  QSCKY-----SALEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALA 72
           QSC +     +A  + KRFY+ V I +  G  +EI+LD RKLKTP G LF V +E LA+A
Sbjct: 26  QSCNFHLNYSTATSERKRFYQDVTISQGEGGLFEINLDRRKLKTPGGKLFTVPNEALAIA 85

Query: 73  IAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +A EWDAQ +T++  TMH+T +CNT +DNP +  K  ++   + FL+TDT+ Y  +
Sbjct: 86  VATEWDAQKDTLKFYTMHMTTLCNTALDNPTQRNKDQMITAALKFLETDTVCYRVD 141


>gi|148223427|ref|NP_001090060.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Xenopus
           laevis]
 gi|66910879|gb|AAH97914.1| MGC115713 protein [Xenopus laevis]
          Length = 284

 Score =  109 bits (272), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 55/118 (46%), Positives = 73/118 (61%), Gaps = 6/118 (5%)

Query: 14  LINSIQSCK------YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSE 67
           LI ++Q+        Y+   + K+FY+ V I    G +EI+LD RKLKTP G LF V SE
Sbjct: 20  LIRAVQAAPHKDKRFYAVAVERKKFYENVSISHGEGGFEINLDRRKLKTPQGKLFAVPSE 79

Query: 68  PLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            LALA+A EWD Q + I+  TM LT +CNT +DNP    K  L++  + FL+TDTI Y
Sbjct: 80  ALALAVATEWDCQRDVIKFYTMQLTTLCNTALDNPTLRNKEQLIKPALKFLETDTICY 137


>gi|444525405|gb|ELV14012.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Tupaia
           chinensis]
          Length = 242

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/97 (52%), Positives = 64/97 (65%), Gaps = 5/97 (5%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           P R Y         G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  T
Sbjct: 31  PARAYAP-----PTGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQDTIKFYT 85

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           MHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 86  MHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTIWY 122


>gi|45360725|ref|NP_989036.1| ATP synthase mitochondrial F1 complex assembly factor 2 precursor
           [Xenopus (Silurana) tropicalis]
 gi|38174102|gb|AAH61383.1| hypothetical protein MGC75949 [Xenopus (Silurana) tropicalis]
          Length = 277

 Score =  105 bits (262), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 48/102 (47%), Positives = 66/102 (64%)

Query: 24  SALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           +A  + K+FY+ V I    G +EI+LD RKL+TP G +F   SE LA+A+A EWD Q + 
Sbjct: 29  AAATERKKFYENVSISHGEGGFEINLDRRKLRTPQGKIFTAPSEALAVAVATEWDCQRDV 88

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           I+  TMHLT +CNT +DNP    K  L+   + FL+TDT+ Y
Sbjct: 89  IKFYTMHLTTLCNTALDNPTLRNKEQLITAALKFLETDTVCY 130


>gi|443724098|gb|ELU12261.1| hypothetical protein CAPTEDRAFT_114697 [Capitella teleta]
          Length = 255

 Score =  102 bits (253), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/97 (48%), Positives = 68/97 (70%), Gaps = 1/97 (1%)

Query: 30  KRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           K+FYK   I  +  G +E++LD RKLKTP G +FKV +E LA+A+A EW+AQ + I++  
Sbjct: 8   KKFYKNATITHAEGGGFEVNLDKRKLKTPMGNIFKVPNEGLAMAVAGEWNAQDKIIKKYN 67

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           MH+TA+ NT IDNP   T+  ++  I+ +LDTDT+ Y
Sbjct: 68  MHITALANTAIDNPTHRTRDQVINGILEYLDTDTLCY 104


>gi|391334294|ref|XP_003741540.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Metaseiulus occidentalis]
          Length = 269

 Score = 99.4 bits (246), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 4/117 (3%)

Query: 13  RLINSIQSC----KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEP 68
           RL+ S+ S       S+L KPK+FYK V I++S   +E++LD RKLKTP G L  V +E 
Sbjct: 4   RLVCSVASALRVRGMSSLPKPKKFYKNVSIVKSIDGWEVNLDDRKLKTPAGKLLTVPNEA 63

Query: 69  LALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           +A AIA EW  Q  TI+R  MHLT++ NT IDNP+  T   L + I+ FL+ D++L+
Sbjct: 64  IAAAIATEWAIQKNTIERHAMHLTSLANTSIDNPHNKTAEQLCEEIVEFLEHDSLLF 120


>gi|209731280|gb|ACI66509.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor [Salmo salar]
          Length = 291

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/110 (40%), Positives = 70/110 (63%), Gaps = 1/110 (0%)

Query: 17  SIQSCKYSALEKPKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAA 75
           S+ S  YS + + K+FY+ V I    G  +EI+LD RKLKTP G LF   ++ LA+A+A 
Sbjct: 35  SVNSESYSIVTERKKFYEDVSISHGEGGMFEINLDRRKLKTPGGKLFTAPNQALAIAVAN 94

Query: 76  EWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           EWD Q + ++  +MH+  +CNT +DNP   +K  ++   + +L+TDT+ Y
Sbjct: 95  EWDTQKDMLKFYSMHMNTLCNTALDNPTFRSKDQMITAALKYLETDTVCY 144


>gi|156375596|ref|XP_001630166.1| predicted protein [Nematostella vectensis]
 gi|156217181|gb|EDO38103.1| predicted protein [Nematostella vectensis]
          Length = 237

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 71/99 (71%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK  G+ E+ G ++I++D+RK+KTP      V ++ LA+A+A+EW+ Q  TI+ ++M
Sbjct: 3   KRFYKSAGVEETEGGFQITVDNRKVKTPARNWLVVPNQKLAVAMASEWNMQTGTIKPASM 62

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           HLT++ NTVID P+  +K   +++I+ +L TDT+ + A+
Sbjct: 63  HLTSLANTVIDKPSECSKDQRIEDILEYLYTDTVRFPAS 101


>gi|326436671|gb|EGD82241.1| ATP synthase F1 complex assembly factor 2 [Salpingoeca sp. ATCC
           50818]
          Length = 294

 Score = 94.4 bits (233), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 66/104 (63%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           K +  E  KRFY+K  ++  +G +++ LD R LKTP    F V SE LA  +A EWD Q 
Sbjct: 52  KTTTSESIKRFYEKASVVPCDGGFQVHLDKRSLKTPKRNTFVVPSEELAHTVAFEWDVQG 111

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           + I+ S+M++T +CNT IDNP+ ++  D + N+  F+ TDT+ +
Sbjct: 112 DVIEPSSMNVTLLCNTAIDNPSGMSHEDRIDNVEPFMRTDTVCF 155


>gi|339247857|ref|XP_003375562.1| ATP12 chaperone family protein [Trichinella spiralis]
 gi|316971064|gb|EFV54902.1| ATP12 chaperone family protein [Trichinella spiralis]
          Length = 252

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 1/96 (1%)

Query: 31  RFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           RFYK V ++  +   + I LD R LKTP G +  V SEPLAL IA EW +Q   +  + M
Sbjct: 19  RFYKSVDVMPVDLNRFSIRLDQRPLKTPKGRILTVDSEPLALCIAVEWSSQRANVDLARM 78

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           HLT +C T IDNPN+LT   +V +++  L++DTI +
Sbjct: 79  HLTTLCFTAIDNPNQLTNGQVVDDLLKHLESDTIFF 114


>gi|341886035|gb|EGT41970.1| hypothetical protein CAEBREN_29877 [Caenorhabditis brenneri]
          Length = 272

 Score = 93.6 bits (231), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 6/121 (4%)

Query: 11  YPRLINSIQSCKYSALEKPKRFYKKVGIL----ESNGD--YEISLDHRKLKTPNGVLFKV 64
           + R   S Q+   SAL KPK+FYK+V ++    E  G+  +++ LDHR LKT  G + K+
Sbjct: 8   FTRRFVSNQAASASALTKPKKFYKEVSVINETDEKTGNQIHKVLLDHRVLKTQGGQVLKL 67

Query: 65  SSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTIL 124
            S PLALAIA EW +Q E +Q   M LT +  T  DNP   T   + Q I++++D DT+L
Sbjct: 68  DSYPLALAIAEEWSSQDEFLQLGQMRLTGLAFTAQDNPLEQTADTISQKILDYVDGDTVL 127

Query: 125 Y 125
           +
Sbjct: 128 F 128


>gi|239788964|dbj|BAH71133.1| ACYPI001994 [Acyrthosiphon pisum]
          Length = 291

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 65/95 (68%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMH 90
           +FYK   I+E++  Y + LD  KLKTP G    ++++ LALA+A EW+ Q E I+   MH
Sbjct: 40  KFYKTTSIIENSDSYGVLLDSSKLKTPLGKELIINNKALALAVAEEWEMQKEHIKTDPMH 99

Query: 91  LTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           LT +C   +DNP+ L++ D+VQ I+++L+TDT+ +
Sbjct: 100 LTKLCFLAVDNPSDLSEHDVVQQILSYLETDTVFF 134


>gi|193676456|ref|XP_001951568.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Acyrthosiphon pisum]
          Length = 291

 Score = 92.4 bits (228), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 41/95 (43%), Positives = 65/95 (68%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMH 90
           +FYK   I+E++  Y + LD  KLKTP G    ++++ LALA+A EW+ Q E I+   MH
Sbjct: 40  KFYKTTSIIENSDSYGVLLDSSKLKTPLGKELIINNKALALAVAEEWEMQKEHIKTDPMH 99

Query: 91  LTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           LT +C   +DNP+ L++ D+VQ I+++L+TDT+ +
Sbjct: 100 LTKLCFLAVDNPSDLSEHDVVQQILSYLETDTVFF 134


>gi|392902196|ref|NP_001255920.1| Protein Y116A8C.27, isoform a [Caenorhabditis elegans]
 gi|54110585|emb|CAB55134.2| Protein Y116A8C.27, isoform a [Caenorhabditis elegans]
          Length = 269

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 73/119 (61%), Gaps = 6/119 (5%)

Query: 13  RLINSIQSCKYSALEKPKRFYKKVGIL----ESNGD--YEISLDHRKLKTPNGVLFKVSS 66
           R+     + + SAL KPK+FYK+V ++    ES G+  +++ LDHR LKT  G + K+ S
Sbjct: 7   RVARRFAAAQASALTKPKKFYKEVSVINETDESTGNQIHKVLLDHRVLKTQGGQVLKLDS 66

Query: 67  EPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            PLALAIA EW +Q E +Q   M LT +  T  DNP   T   + Q I+++++ DT+L+
Sbjct: 67  YPLALAIAEEWSSQDEFLQLGQMRLTGLAFTAQDNPLEQTADTISQKILDYVEGDTVLF 125


>gi|449681892|ref|XP_004209949.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Hydra magnipapillata]
          Length = 269

 Score = 89.4 bits (220), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/99 (46%), Positives = 57/99 (57%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V +      + I LD R +KTP G    V  EPL +A+A EW  Q   I  S M
Sbjct: 26  KRFYKEVTLKPVQDGFLIQLDKRTIKTPLGKPLLVPCEPLGIAVANEWHMQDSDINTSVM 85

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT ICNT IDNP  +TK DLV  ++ +  TDTI   A+
Sbjct: 86  PLTVICNTAIDNPCSITKSDLVNGMLRYFQTDTICALAD 124


>gi|198434710|ref|XP_002131815.1| PREDICTED: similar to ATP synthase mitochondrial F1 complex
           assembly factor 2 [Ciona intestinalis]
          Length = 272

 Score = 87.0 bits (214), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 66/99 (66%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           ++FYK+  I  S+G +EI+LD+RKL+TPNG + K+ +E LA A++ EW+ Q++ ++   M
Sbjct: 27  EKFYKEARICHSDGGFEINLDNRKLRTPNGNIVKLPTESLAQAVSVEWNNQNKVLKLDQM 86

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT +C + ++N   ++   LV +  N+L TDTIL   N
Sbjct: 87  PLTTLCFSAVENKPTISAKTLVSSCFNYLHTDTILCRIN 125


>gi|308482746|ref|XP_003103576.1| hypothetical protein CRE_28743 [Caenorhabditis remanei]
 gi|308259997|gb|EFP03950.1| hypothetical protein CRE_28743 [Caenorhabditis remanei]
          Length = 269

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 6/106 (5%)

Query: 26  LEKPKRFYKKVGIL----ESNGD--YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           L KPK+FYK+V +     E  G+  +++ LDHR LKT  G + K++S PLALAIA EW +
Sbjct: 20  LSKPKKFYKEVSVANEIDEKTGNSIHKVLLDHRVLKTQGGQVLKLNSYPLALAIAEEWSS 79

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           Q E +Q   M LT +  T  DNP   T   + Q I++++D DT+L+
Sbjct: 80  QAEFLQLGQMRLTGLAFTAQDNPLEQTADTISQKILDYVDGDTVLF 125


>gi|226467802|emb|CAX69777.1| putative ATP synthase mitochondrial F1 complex assembly factor 2
           [Schistosoma japonicum]
          Length = 276

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 45/102 (44%), Positives = 64/102 (62%), Gaps = 7/102 (6%)

Query: 30  KRFYKKVGILESNGD------YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           K+FYK V I +S+ +      ++I LD RKL+TP G+ F V +E LA+A+A EWD+Q  T
Sbjct: 28  KKFYKNVTIFQSSHENYEQPVFQILLDQRKLRTPTGIHFHVPNEALAVAVAHEWDSQDST 87

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           I+R TM LT +CN  +D P       LV  I+ + D+DTI +
Sbjct: 88  IKRYTMPLTTLCNRALDTPADQHDI-LVGAIMQYADSDTICF 128


>gi|340378325|ref|XP_003387678.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Amphimedon queenslandica]
          Length = 257

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 8/111 (7%)

Query: 20  SCKYSAL----EKPKRFYKKVGILESNGDY-EISLDHRKLKTPNGVLFKVSSEPLALAIA 74
           +C++  L     + KRFYK+  + ++ G +  + LDHR L+TP   +F V SE LA+A+ 
Sbjct: 14  ACRFYGLVTRNWERKRFYKQATVYQTEGGWFGVKLDHRNLRTPLRRVFSVPSESLAIAVC 73

Query: 75  AEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            EW +Q + IQ S MHLTA+ NTVID  + L K D    ++ +L TDTI Y
Sbjct: 74  HEWKSQTKFIQPSLMHLTALSNTVIDRSDNLNKTD---ELLAYLSTDTICY 121


>gi|164609122|gb|ABY62782.1| ATP synthase mitochondrial F1 complex assembly factor-like protein
           [Hydractinia symbiolongicarpus]
          Length = 265

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 57/93 (61%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMH 90
           RFYK V I      Y I LD+R +KTP      V ++ LA+A+A EW  Q E I +  M 
Sbjct: 28  RFYKNVDIHPDKNGYLIQLDNRTIKTPLLNQLCVPTKRLAVAVANEWFMQTEVIDQHNMP 87

Query: 91  LTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
           LTAICNT IDNP  +T+ +LV  I+NF  TDTI
Sbjct: 88  LTAICNTAIDNPTNITQEELVDEILNFFHTDTI 120


>gi|313105484|gb|ADR32100.1| ATP synthase [Hydractinia symbiolongicarpus]
          Length = 265

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 57/93 (61%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMH 90
           RFYK V I      Y I LD+R +KTP      V ++ LA+A+A EW  Q E I +  M 
Sbjct: 28  RFYKNVDIHPDKNGYLIQLDNRTIKTPLLNQLCVPTKRLAVAVANEWFMQTEVIDQHNMP 87

Query: 91  LTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
           LTAICNT IDNP  +T+ +LV  I+NF  TDTI
Sbjct: 88  LTAICNTAIDNPTNITQEELVDEILNFFHTDTI 120


>gi|260831593|ref|XP_002610743.1| hypothetical protein BRAFLDRAFT_126077 [Branchiostoma floridae]
 gi|229296111|gb|EEN66753.1| hypothetical protein BRAFLDRAFT_126077 [Branchiostoma floridae]
          Length = 257

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/79 (50%), Positives = 54/79 (68%)

Query: 13 RLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA 72
          R+   +Q+ +       KRFYK V I +SNG YEI+LD RKLKTP   LF V +EP+A+A
Sbjct: 16 RIFAPMQTIERQMAAARKRFYKNVSISQSNGMYEINLDRRKLKTPMSRLFSVPNEPIAIA 75

Query: 73 IAAEWDAQHETIQRSTMHL 91
          +A EW+AQH+ I+ S MH+
Sbjct: 76 VATEWEAQHKEIKMSQMHM 94


>gi|268534540|ref|XP_002632401.1| Hypothetical protein CBG00425 [Caenorhabditis briggsae]
          Length = 269

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 6/112 (5%)

Query: 20  SCKYSALEKPKRFYKKVGIL----ESNGD--YEISLDHRKLKTPNGVLFKVSSEPLALAI 73
           S + SAL KPK+FYK+V +     E  G+  +++ LDH  LKT  G + K+ S PLALAI
Sbjct: 14  SNQASALTKPKKFYKEVTLASEVDEKTGNQIHKVLLDHHVLKTQGGQVLKLDSYPLALAI 73

Query: 74  AAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           A EW +Q E +Q   M LT +  T  DNP   +   + Q I++++D DT+L+
Sbjct: 74  AQEWSSQDEFLQLGQMRLTGLAFTSQDNPLEQSADTISQKILDYVDGDTVLF 125


>gi|313105488|gb|ADR32103.1| ATP synthase [Hydractinia symbiolongicarpus]
          Length = 265

 Score = 84.3 bits (207), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 57/93 (61%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMH 90
           RFYK V I      Y I LD+R +KTP      V ++ LA+A+A EW  Q E I +  M 
Sbjct: 28  RFYKNVDIHPDKNGYLIQLDNRTIKTPLLNQLCVPTKRLAVAVANEWFMQTEVIDQHNMP 87

Query: 91  LTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
           LTAICNT IDNP  +T+ +LV  I+NF  T+TI
Sbjct: 88  LTAICNTAIDNPTNITQEELVDEILNFFHTETI 120


>gi|335308501|ref|XP_003361256.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Sus scrofa]
          Length = 419

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/62 (59%), Positives = 46/62 (74%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +TI+  TM
Sbjct: 45  KRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAVAVATEWDSQQDTIKPYTM 104

Query: 90  HL 91
           HL
Sbjct: 105 HL 106


>gi|291238158|ref|XP_002739002.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
          2-like [Saccoglossus kowalevskii]
          Length = 261

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 1/82 (1%)

Query: 13 RLINSIQSCK-YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLAL 71
          RL   ++ C+  S+    KRFYK V + +++  +EI+LD+RKLKTP G +F V +EPLA+
Sbjct: 16 RLAQQVRQCRQMSSFRDIKRFYKNVSVTQNDSIFEINLDNRKLKTPMGNIFTVPNEPLAI 75

Query: 72 AIAAEWDAQHETIQRSTMHLTA 93
          A+A EWD+Q + IQR TM+L +
Sbjct: 76 AVATEWDSQAKLIQRHTMYLVS 97


>gi|324520107|gb|ADY47562.1| ATP synthase F1 complex assembly factor 2 [Ascaris suum]
          Length = 274

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 54/84 (64%)

Query: 45  YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNR 104
           Y I LD RKLKTP+G   ++ SE LALAIA EW+ Q + +  S M LT +  T +DNP  
Sbjct: 47  YNIYLDDRKLKTPSGKALEIESEALALAIAQEWNNQKKYLNISHMRLTGLLFTALDNPYS 106

Query: 105 LTKFDLVQNIINFLDTDTILYHAN 128
           + K D+V  I+ +LD DTIL+ A 
Sbjct: 107 IKKEDIVSKILEYLDGDTILFRAG 130


>gi|119576083|gb|EAW55679.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_d [Homo sapiens]
 gi|194377522|dbj|BAG57709.1| unnamed protein product [Homo sapiens]
          Length = 118

 Score = 82.8 bits (203), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 49/69 (71%)

Query: 23  YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           Y+   + KRFY+ V I +  G +EI+LDHRKLKTP   LF V SE LA+A+A EWD+Q +
Sbjct: 40  YAPPTERKRFYQNVSITQGEGGFEINLDHRKLKTPQAKLFTVPSEALAIAVATEWDSQQD 99

Query: 83  TIQRSTMHL 91
           TI+  TMHL
Sbjct: 100 TIKYYTMHL 108


>gi|144899544|emb|CAM76408.1| ATP12 ATPase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 235

 Score = 82.0 bits (201), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 58/101 (57%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+ GI+  +G + + LD R +KTP G   +V SE LALAIA EWDAQ E I+  TM
Sbjct: 7   KRFHKQAGIVAVDGGFAVQLDGRGVKTPVGRKLEVPSERLALAIAGEWDAQGEVIKPYTM 66

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT +  T +D   P R    D    +I +  TD + Y A 
Sbjct: 67  PLTQLATTALDRVGPERAVITD---QMIAYAATDLLCYRAE 104


>gi|365891924|ref|ZP_09430284.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
 gi|365332086|emb|CCE02815.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3809]
          Length = 260

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 19  QSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAE 76
           Q     A+  P  KRFYK+ G  E+ G + ++LD R ++TP+G +  V  + LA A+AAE
Sbjct: 17  QEAARQAMRAPQRKRFYKEAGSAEAEGGFHVTLDGRPIRTPSGRIVVVPVKELAEAVAAE 76

Query: 77  WDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           W AQ ETI  +TM LT   N+V+ +       D+ ++I  +L +D + Y A 
Sbjct: 77  WGAQGETIDPATMPLTRFANSVVQSVVERVD-DVREDIARYLQSDLLFYRAG 127


>gi|316933566|ref|YP_004108548.1| ATPase [Rhodopseudomonas palustris DX-1]
 gi|315601280|gb|ADU43815.1| ATP12 ATPase [Rhodopseudomonas palustris DX-1]
          Length = 261

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           + S  + PKRFY + G+ E NG + + LD R +KTP+          LA AIAAEW AQ 
Sbjct: 22  RTSRAQLPKRFYTEAGVAEENGGFAVRLDGRSVKTPSRNALAAPDRALAEAIAAEWQAQG 81

Query: 82  ETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           ETI  STM LT + N+VID    R+    +  +I  +  +D + Y A 
Sbjct: 82  ETIDPSTMPLTRLANSVIDGVAGRINA--VTDDIAKYFGSDLLFYRAE 127


>gi|39936270|ref|NP_948546.1| ATP12 ATPase [Rhodopseudomonas palustris CGA009]
 gi|39650125|emb|CAE28648.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 261

 Score = 80.5 bits (197), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/108 (39%), Positives = 59/108 (54%), Gaps = 3/108 (2%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           + S  + PKRFY + G+ E NG + + LD R +KTP+          LA AIAAEW AQ 
Sbjct: 22  RTSRAQLPKRFYTEAGVAEENGGFAVRLDGRAVKTPSRNALAAPDRALAEAIAAEWQAQG 81

Query: 82  ETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           ETI  STM LT + N+VID    R+    +  +I  +  +D + Y A 
Sbjct: 82  ETIDPSTMPLTRLANSVIDGVAGRVEA--VTDDIAKYFGSDLLFYRAE 127


>gi|365882305|ref|ZP_09421555.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
 gi|365289390|emb|CCD94086.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 375]
          Length = 260

 Score = 80.1 bits (196), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 66/113 (58%), Gaps = 5/113 (4%)

Query: 19  QSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAE 76
           Q     A+  P  KRFYK  G  E+ G + ++LD R ++TP+G +  V  + LA A+AAE
Sbjct: 17  QEAARQAMRAPQRKRFYKAAGTAETEGGHHVTLDGRPIRTPSGRVVVVPVQELAEAVAAE 76

Query: 77  WDAQHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           W AQ ETI  +TM LT   N+V+ +  +R+   D+ +++  +L +D + Y A 
Sbjct: 77  WGAQGETIDPATMPLTRFANSVVQSVVDRVD--DVREDMARYLQSDLLFYRAG 127


>gi|367471680|ref|ZP_09471285.1| conserved hypothetical protein; putative chaperone required for the
           assembly of the mitochondrial F1-ATPase [Bradyrhizobium
           sp. ORS 285]
 gi|365275999|emb|CCD83753.1| conserved hypothetical protein; putative chaperone required for the
           assembly of the mitochondrial F1-ATPase [Bradyrhizobium
           sp. ORS 285]
          Length = 260

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 5/113 (4%)

Query: 19  QSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAE 76
           Q     A+  P  KRFYK  G  E+ G + ++LD R ++TP+G +  V    LA A+AAE
Sbjct: 17  QEAARQAMRTPQRKRFYKDAGTAEAEGGHHVTLDGRPIRTPSGRVVVVPVRELAEAVAAE 76

Query: 77  WDAQHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           W AQ ETI  +TM LT   N+V+ +  +R+   D+ +++  +L +D + Y A 
Sbjct: 77  WGAQGETIDPATMPLTRFANSVVQSVVDRVE--DVREDMARYLQSDLLFYRAG 127


>gi|148256354|ref|YP_001240939.1| hypothetical protein BBta_5031 [Bradyrhizobium sp. BTAi1]
 gi|146408527|gb|ABQ37033.1| hypothetical protein BBta_5031 [Bradyrhizobium sp. BTAi1]
          Length = 260

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 3/112 (2%)

Query: 19  QSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAE 76
           Q     A+  P  KRFYK VG    +G Y ++LD R ++TP+G +  V  + LA A+AAE
Sbjct: 17  QEAARQAMRAPQRKRFYKDVGTAAVDGGYHVTLDGRPIRTPSGRVVVVPVQALAEAVAAE 76

Query: 77  WDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           W AQ E I  +TM LT   N+V+ +    T  D+ +++  +L +D + Y A 
Sbjct: 77  WQAQGEIIDPATMPLTRFANSVVQSVIDRTD-DVREDMAKYLQSDLLFYRAG 127


>gi|381167035|ref|ZP_09876247.1| Chaperone required for the assembly of the mitochondrial F1-ATPase
           [Phaeospirillum molischianum DSM 120]
 gi|380683850|emb|CCG41059.1| Chaperone required for the assembly of the mitochondrial F1-ATPase
           [Phaeospirillum molischianum DSM 120]
          Length = 236

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           +RFY+     ES G + + LD R ++TP G    V + PLA A+AAEWDAQ ETI  STM
Sbjct: 7   RRFYEAASAAESEGGFAVHLDGRPVRTPGGRFLLVPARPLAEAVAAEWDAQVETILPSTM 66

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + +T +D   P R T   +   ++ +  TD + Y A 
Sbjct: 67  PLTQLSSTALDRVAPERET---ITGYLMAYAGTDLLCYRAE 104


>gi|374576193|ref|ZP_09649289.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM471]
 gi|374424514|gb|EHR04047.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM471]
          Length = 264

 Score = 78.6 bits (192), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+VG+ E+   + I+LD + ++TP+G    + S  LA A+AAEW  Q+ETI+  TM
Sbjct: 30  KRFYKEVGVAEAEDGFAITLDGKAIRTPSGRQVVIPSRALADAVAAEWADQNETIKPMTM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
            LT I N+V++    + + DLV  ++  +L +D + Y A 
Sbjct: 90  PLTRIANSVVE--GVVDRVDLVTDDLAKYLQSDLLFYRAG 127


>gi|115525544|ref|YP_782455.1| ATP12 ATPase [Rhodopseudomonas palustris BisA53]
 gi|115519491|gb|ABJ07475.1| ATP12 ATPase [Rhodopseudomonas palustris BisA53]
          Length = 259

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 3/103 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           +PKRFYK  G +E+   + I+LD + ++TP+  L    +  LA AIAAEW AQ E I  S
Sbjct: 28  RPKRFYKDAGFIETADGFAITLDGKNVRTPSKQLLVAPNRVLAQAIAAEWQAQPELIDPS 87

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHANF 129
           +M LT + N+VID   +R+    +  +I N+  +D   Y A+F
Sbjct: 88  SMPLTRLANSVIDGVADRVIA--VTDDIANYFQSDLTFYRASF 128


>gi|398353274|ref|YP_006398738.1| chaperone protein [Sinorhizobium fredii USDA 257]
 gi|390128600|gb|AFL51981.1| putative chaperone protein [Sinorhizobium fredii USDA 257]
          Length = 261

 Score = 77.4 bits (189), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 26  LEKP--KRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           ++KP  KRFYK VG+ ++ GD Y + LD R ++TP    F V +  LA  +AAEWDAQ +
Sbjct: 25  MQKPLAKRFYKGVGVAQAEGDGYAVLLDGRSVRTPARRSFTVPTLKLAELLAAEWDAQAD 84

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            I  S M LT I NT ID    L +  +  +I+ F  TD + Y A+
Sbjct: 85  IIDPSAMPLTRIVNTAIDGVA-LDQRAVFDDILKFAGTDLLCYRAD 129


>gi|421604901|ref|ZP_16046935.1| hypothetical protein BCCGELA001_39452, partial [Bradyrhizobium sp.
           CCGE-LA001]
 gi|404262991|gb|EJZ28637.1| hypothetical protein BCCGELA001_39452, partial [Bradyrhizobium sp.
           CCGE-LA001]
          Length = 183

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 6/116 (5%)

Query: 16  NSIQSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAI 73
           +S +S + SA   P  KRFYK  G+ ++ G + I+LD + ++TP+G    + S  LA A+
Sbjct: 15  DSRESARASA-RTPLRKRFYKAAGVADAEGGFAITLDGKPIRTPSGRQVVIPSRELADAV 73

Query: 74  AAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQ-NIINFLDTDTILYHAN 128
           A+EW AQ E+I   TM LT I N+VI+    + + +LV  ++  + +TD + Y A 
Sbjct: 74  ASEWAAQGESIDPVTMPLTRIANSVIE--GVVDRVELVSDDLAKYFETDLLFYRAG 127


>gi|192291992|ref|YP_001992597.1| ATP12 ATPase [Rhodopseudomonas palustris TIE-1]
 gi|192285741|gb|ACF02122.1| ATP12 ATPase [Rhodopseudomonas palustris TIE-1]
          Length = 261

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           + S  + PKRFYK+  + E +G + + LD R +KTP+          LA  IAAEW AQ 
Sbjct: 22  RTSRAQLPKRFYKQASVAEDSGGFAVRLDDRPIKTPSRHALAAPDRTLAETIAAEWQAQG 81

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           ETI  STM LT + N+VID     T+  +  +I  +  +D + Y A 
Sbjct: 82  ETIDPSTMPLTRLANSVIDGVAGRTEA-VTDDIAKYFGSDLLFYRAE 127


>gi|75675590|ref|YP_318011.1| chaperone required for the assembly of F1-ATPase [Nitrobacter
           winogradskyi Nb-255]
 gi|74420460|gb|ABA04659.1| Chaperone required for the assembly of F1-ATPase [Nitrobacter
           winogradskyi Nb-255]
          Length = 260

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 4/112 (3%)

Query: 19  QSCKYSALEKP-KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEW 77
           ++ + SA   P KRFY +VG+ E+   + I LD R ++TP+  +       +A  IAAEW
Sbjct: 17  ETARSSAPAGPRKRFYARVGVNETPEGFAILLDDRPVRTPSRNVLAAPVREIAETIAAEW 76

Query: 78  DAQHETIQRSTMHLTAICNTVIDNPNRLTKFD-LVQNIINFLDTDTILYHAN 128
           DAQH+ I   TM LT + N++ID      + D +V++I  +L+TD + Y A+
Sbjct: 77  DAQHDLINPMTMPLTRLANSIIDGVT--VRVDAVVEDIAKYLETDLLFYRAS 126


>gi|146341532|ref|YP_001206580.1| chaperone protein [Bradyrhizobium sp. ORS 278]
 gi|146194338|emb|CAL78362.1| conserved hypothetical protein; putative chaperone protein
           [Bradyrhizobium sp. ORS 278]
          Length = 260

 Score = 77.0 bits (188), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 5/113 (4%)

Query: 19  QSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAE 76
           Q     A+  P  KRFYK+ G  E+ G + ++LD R ++TP+G +  V    LA A+AAE
Sbjct: 17  QEAARQAMRAPQRKRFYKEAGTAEAEGGHYVTLDGRPIRTPSGRVVVVPVRELAEAVAAE 76

Query: 77  WDAQHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           W AQ ETI  ++M LT   N+V+ +  +R+   D+  ++  +L +D + Y A 
Sbjct: 77  WGAQGETIDPASMPLTRFANSVVQSVVDRVE--DVRADMARYLQSDLLFYRAG 127


>gi|197104734|ref|YP_002130111.1| ATP synthase F1 complex assembly factor 2 [Phenylobacterium
           zucineum HLK1]
 gi|196478154|gb|ACG77682.1| ATP synthase F1 complex assembly factor 2 [Phenylobacterium
           zucineum HLK1]
          Length = 243

 Score = 77.0 bits (188), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 1/102 (0%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           EKP+RFYK V + E    + + LD R L+TP G  F+  S  +A  +A EW AQ ET++ 
Sbjct: 10  EKPRRFYKDVSVGEDAAGFAVLLDGRALRTPKGQPFRAPSREIAEQVAEEWAAQGETLEL 69

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +TMH T + NT +++ ++  +  +   +  +  +D + Y A 
Sbjct: 70  ATMHATRLANTALESISQ-NREAVAGQVAQYAASDLVCYFAE 110


>gi|393906464|gb|EFO22807.2| hypothetical protein LOAG_05675 [Loa loa]
          Length = 276

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 2/98 (2%)

Query: 30  KRFYKKVGILESNGD--YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRFY++  ++    +  Y I LD   L TP     K+ SE LALA+A EW+ Q + ++  
Sbjct: 21  KRFYEEARVVFKPMEEVYNIYLDKHNLVTPKRNPVKIYSEALALAVAEEWNMQKDELRMD 80

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            M LT +  T IDNP  L K DL+  ++ FLD DT+LY
Sbjct: 81  LMRLTGLIFTAIDNPMSLKKSDLLSQVLQFLDKDTVLY 118


>gi|312077338|ref|XP_003141260.1| hypothetical protein LOAG_05675 [Loa loa]
          Length = 270

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 2/98 (2%)

Query: 30  KRFYKKVGILESNGD--YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRFY++  ++    +  Y I LD   L TP     K+ SE LALA+A EW+ Q + ++  
Sbjct: 21  KRFYEEARVVFKPMEEVYNIYLDKHNLVTPKRNPVKIYSEALALAVAEEWNMQKDELRMD 80

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            M LT +  T IDNP  L K DL+  ++ FLD DT+LY
Sbjct: 81  LMRLTGLIFTAIDNPMSLKKSDLLSQVLQFLDKDTVLY 118


>gi|386402209|ref|ZP_10086987.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM1253]
 gi|385742835|gb|EIG63031.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. WSM1253]
          Length = 264

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+ G+ E+   + I+LD + ++TP+G    + S  LA A+AAEW  Q+ETI+  TM
Sbjct: 30  KRFYKEAGVTEAEDGFAITLDGKAIRTPSGRQVVIPSRALADAVAAEWADQNETIKPMTM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
            LT I N+V++    + + DLV  ++  +L +D + Y A 
Sbjct: 90  PLTRIANSVVE--GVVDRVDLVTDDLAKYLQSDLLFYRAG 127


>gi|389694608|ref|ZP_10182702.1| chaperone required for the assembly of F1-ATPase [Microvirga sp.
           WSM3557]
 gi|388587994|gb|EIM28287.1| chaperone required for the assembly of F1-ATPase [Microvirga sp.
           WSM3557]
          Length = 244

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK  G+ E +G + ++LD R  KTP      V S  LA A+A EW  Q   I  ST
Sbjct: 13  PKRFYKDAGVEERDGLFHLTLDGRTAKTPGKQALAVPSRALAGALAEEWQGQGGEIDPST 72

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T I N+ ID  +   + D+V +++ +  +D + Y A 
Sbjct: 73  MPITRIVNSAIDGVSPRQR-DVVDDLVRYAGSDLVYYRAG 111


>gi|358331495|dbj|GAA50290.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Clonorchis
           sinensis]
          Length = 600

 Score = 75.5 bits (184), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 5/81 (6%)

Query: 45  YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNR 104
           YE+ LD RKL+TP G    + +E LALA+A EWD+Q +TI+R +MHL      ++D    
Sbjct: 319 YEVQLDKRKLRTPGGNTLLIPNEALALAVAVEWDSQKDTIKRHSMHL-----VLLDWRPE 373

Query: 105 LTKFDLVQNIINFLDTDTILY 125
           +   D+VQ+I+ + DTDTI +
Sbjct: 374 IKPLDVVQSIMQYADTDTICF 394


>gi|365896495|ref|ZP_09434567.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
 gi|365422753|emb|CCE07109.1| conserved hypothetical protein [Bradyrhizobium sp. STM 3843]
          Length = 261

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 6/114 (5%)

Query: 19  QSCKYSALEKP--KRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAA 75
           Q     A+  P  KRFYK+ G+ E+  G Y ++LD R ++TP+G +  +  + LA A+AA
Sbjct: 17  QEKAREAMRGPQRKRFYKQAGVKEAEGGGYAVTLDDRPIRTPSGQIVVIPVKGLAEAVAA 76

Query: 76  EWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQ-NIINFLDTDTILYHAN 128
           EW AQ ET+   TM LT   N+V++    + + DLV+ +I  +L +D + Y A+
Sbjct: 77  EWQAQGETLNPLTMPLTRFANSVMEGV--VGRTDLVRDDIAKYLRSDLLFYRAS 128


>gi|338974998|ref|ZP_08630353.1| ATPase [Bradyrhizobiaceae bacterium SG-6C]
 gi|338231597|gb|EGP06732.1| ATPase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 257

 Score = 75.5 bits (184), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           K+FY   G+ E  G + ++LD ++++TP   L    +  LA AIAAEWDAQ E I   +M
Sbjct: 30  KKFYTSAGVAEGPGGFGVTLDGKQVRTPGKNLLAAPTRDLAEAIAAEWDAQGENIDPMSM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
            LT + N+VID      +  +  +   +L+TD + Y A F
Sbjct: 90  PLTRLANSVIDGVAANVQA-VADDAAKYLETDLLFYRAGF 128


>gi|118591138|ref|ZP_01548537.1| hypothetical protein SIAM614_15967 [Stappia aggregata IAM 12614]
 gi|118436214|gb|EAV42856.1| hypothetical protein SIAM614_15967 [Stappia aggregata IAM 12614]
          Length = 257

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 59/103 (57%), Gaps = 3/103 (2%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           E PKRFYK V  + ++G + I LD R +KTP      + SE LA A+AAEW AQ + I  
Sbjct: 27  ELPKRFYKDVTHVPADGGFAIHLDGRPVKTPGKAPLLLPSEALAKAVAAEWQAQEKEINP 86

Query: 87  STMHLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
           ++M LT I N+ +D  +   +FD V  +I  F   D + Y A+
Sbjct: 87  ASMPLTRISNSALDAVS--VRFDEVADDITRFAGNDALCYRAD 127


>gi|325180260|emb|CCA14663.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 269

 Score = 75.1 bits (183), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 61/101 (60%), Gaps = 3/101 (2%)

Query: 31  RFYKKVGILESNGD---YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           RFY +V ++E   D   Y ++LD R +KT     F++  + LA A+A EWDAQ   I+ +
Sbjct: 34  RFYNRVSVVEMRSDAPAYGVALDGRNIKTSLKSPFQLPYKALAYAVAHEWDAQKNIIRPA 93

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM L  + +T+ID P   ++ +L+ ++ NFL +DTI Y  +
Sbjct: 94  TMPLMTLASTIIDLPLTSSRHELIDDMTNFLQSDTICYQVS 134


>gi|15965140|ref|NP_385493.1| hypothetical protein SMc01277 [Sinorhizobium meliloti 1021]
 gi|384529098|ref|YP_005713186.1| ATP12 ATPase [Sinorhizobium meliloti BL225C]
 gi|433613158|ref|YP_007189956.1| Chaperone [Sinorhizobium meliloti GR4]
 gi|15074320|emb|CAC45966.1| Hypothetical protein SMc01277 [Sinorhizobium meliloti 1021]
 gi|333811274|gb|AEG03943.1| ATP12 ATPase [Sinorhizobium meliloti BL225C]
 gi|429551348|gb|AGA06357.1| Chaperone [Sinorhizobium meliloti GR4]
          Length = 261

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK+     ++ G Y + LD R ++TP    F V +E LA  +AAEWDAQ E I  S
Sbjct: 30  PKRFYKQASAAPADDGGYAVLLDGRSVRTPAKRAFTVPTEKLAGLLAAEWDAQTEVIDPS 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M LT I NT ID    L    +  +I+ F+ +D + Y A+
Sbjct: 90  AMPLTRIVNTAIDGVA-LDDRAVFDDILRFVGSDLLCYRAD 129


>gi|90424890|ref|YP_533260.1| ATP12 ATPase [Rhodopseudomonas palustris BisB18]
 gi|90106904|gb|ABD88941.1| ATP12 ATPase [Rhodopseudomonas palustris BisB18]
          Length = 261

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 3/103 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           +PKRFY+  G++E+ G + I+LD + ++TP+       +  LA AI  EW AQ + I+ +
Sbjct: 28  RPKRFYQNAGLVEAEGGFAITLDDKAVRTPSRGHLIAPNRALAEAIVGEWQAQQQFIEPT 87

Query: 88  TMHLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHANF 129
           TM LT + N+VID     T+ + V  ++  + +TD + Y A+F
Sbjct: 88  TMPLTRLANSVIDAVT--TRVEAVTDDVAKYFETDLLCYRASF 128


>gi|334315927|ref|YP_004548546.1| ATP12 ATPase [Sinorhizobium meliloti AK83]
 gi|407720327|ref|YP_006839989.1| hypothetical protein BN406_01118 [Sinorhizobium meliloti Rm41]
 gi|418405275|ref|ZP_12978683.1| ATP12 ATPase [Sinorhizobium meliloti CCNWSX0020]
 gi|334094921|gb|AEG52932.1| ATP12 ATPase [Sinorhizobium meliloti AK83]
 gi|359500764|gb|EHK73418.1| ATP12 ATPase [Sinorhizobium meliloti CCNWSX0020]
 gi|407318559|emb|CCM67163.1| hypothetical protein BN406_01118 [Sinorhizobium meliloti Rm41]
          Length = 261

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK+     ++ G Y + LD R ++TP    F V +E LA  +AAEWDAQ E I  S
Sbjct: 30  PKRFYKQASAAPADDGGYAVLLDGRSVRTPAKRAFTVPTEKLAGLLAAEWDAQTEVIDPS 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M LT I NT ID    L    +  +I+ F+ +D + Y A+
Sbjct: 90  AMPLTRIVNTAIDGVA-LDDRAVFDDILRFVGSDLLCYRAD 129


>gi|414167312|ref|ZP_11423541.1| hypothetical protein HMPREF9696_01396 [Afipia clevelandensis ATCC
           49720]
 gi|410891129|gb|EKS38927.1| hypothetical protein HMPREF9696_01396 [Afipia clevelandensis ATCC
           49720]
          Length = 257

 Score = 74.7 bits (182), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           K+FY   G+ E  G + ++LD ++++TP   L    +  LA AIAAEWDAQ E I   +M
Sbjct: 30  KKFYTSAGVAEGPGGFGVTLDGKQVRTPGKNLLAAPTRDLAEAIAAEWDAQGEHIDPMSM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
            LT + N+VID      +  +  +   +L+TD + Y A F
Sbjct: 90  PLTRLANSVIDGVAANVQA-VADDAAKYLETDLLFYRAGF 128


>gi|209549476|ref|YP_002281393.1| ATPase [Rhizobium leguminosarum bv. trifolii WSM2304]
 gi|209535232|gb|ACI55167.1| ATP12 ATPase [Rhizobium leguminosarum bv. trifolii WSM2304]
          Length = 261

 Score = 74.3 bits (181), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V + E  G + I+LD + ++TP   +  V ++ LA  +AAEW AQ E I   T
Sbjct: 30  PKRFYAEVAVAEHEGGFAITLDGKMVRTPARQVLAVPTQALARLVAAEWQAQGEEIDPVT 89

Query: 89  MHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D  + NR   F   ++I+ F  +D I Y A+
Sbjct: 90  MPVTRLVNTALDGVDANRQAIF---EDILRFSSSDLICYRAD 128


>gi|126737041|ref|ZP_01752776.1| hypothetical protein RSK20926_11439 [Roseobacter sp. SK209-2-6]
 gi|126721626|gb|EBA18329.1| hypothetical protein RSK20926_11439 [Roseobacter sp. SK209-2-6]
          Length = 234

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+V ++E    + I+LD RK+KTP      V S  +A AIAAEWDAQ E I   
Sbjct: 5   KQKRFWKEVSVVEEGDGFAITLDGRKVKTPAKAALVVPSRAMAEAIAAEWDAQEEGINPE 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
           TM  T   N  ID      + + V N++ ++ D+D + Y A 
Sbjct: 65  TMPCTKSANAAID--KVANQHEEVANMLADYGDSDLLCYRAE 104


>gi|424895149|ref|ZP_18318723.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2297]
 gi|393179376|gb|EJC79415.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2297]
          Length = 261

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY  V + E  G + ++LD + ++TP   +  V +E LA  +AAEW AQ E I   T
Sbjct: 30  PKRFYTDVSVAEHEGGFAVTLDGKTVRTPARQVLAVPTEALARLVAAEWQAQGEEIDPLT 89

Query: 89  MHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D  + NR   F   ++I+ F  +D I Y A+
Sbjct: 90  MPVTRLVNTALDGVDANRQAIF---EDILRFSSSDLICYRAD 128


>gi|421588808|ref|ZP_16034048.1| hypothetical protein RCCGEPOP_08665, partial [Rhizobium sp. Pop5]
 gi|403706424|gb|EJZ21690.1| hypothetical protein RCCGEPOP_08665, partial [Rhizobium sp. Pop5]
          Length = 166

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 59/100 (59%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +VGI E  G + I+LD + ++TP   +  V +  LA  +AAEW+AQ E I   T
Sbjct: 30  PKRFYTEVGIAEHEGGFAITLDGKMVRTPARQVLAVPTAALARLVAAEWEAQAEVIDPVT 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D     T+  + ++I+ F  +D + Y A+
Sbjct: 90  MPVTRLVNTALDGIVSNTQA-IFEDILRFSSSDLLCYRAD 128


>gi|150396238|ref|YP_001326705.1| ATP12 ATPase [Sinorhizobium medicae WSM419]
 gi|150027753|gb|ABR59870.1| ATP12 ATPase [Sinorhizobium medicae WSM419]
          Length = 261

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK+     + +G Y + LD R ++TP    F V SE LA  +AAEWDAQ + I  S
Sbjct: 30  PKRFYKQASAAPAEDGGYAVLLDGRPVRTPAKRPFAVPSEKLAQLLAAEWDAQADVIDPS 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M LT + NT ID    L +  +  +I+ F  +D + Y A+
Sbjct: 90  AMPLTRLVNTAIDG-VALEERAVFDDILRFAGSDLLCYRAD 129


>gi|91977595|ref|YP_570254.1| ATP12 ATPase [Rhodopseudomonas palustris BisB5]
 gi|91684051|gb|ABE40353.1| ATP12 ATPase [Rhodopseudomonas palustris BisB5]
          Length = 261

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 59/101 (58%), Gaps = 3/101 (2%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY + GI E+   + I+LD R +KTP+       +  LA AIAAEW AQ E I  +T
Sbjct: 29  PKRFYTEAGITEAADGFAITLDGRGVKTPSRNALTAPTRELAEAIAAEWQAQQELIDPTT 88

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQ-NIINFLDTDTILYHAN 128
           M LT + N+VID    + + + V+ ++  +  +D + Y A+
Sbjct: 89  MPLTRLANSVID--GVVGRVEAVRDDVAKYFGSDLLFYRAS 127


>gi|402487859|ref|ZP_10834674.1| ATPase [Rhizobium sp. CCGE 510]
 gi|401813027|gb|EJT05374.1| ATPase [Rhizobium sp. CCGE 510]
          Length = 261

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY  V + E  G + I+LD + ++TP  ++  V ++ LA  +AAEW AQ E I   T
Sbjct: 30  PKRFYTDVSVAEHEGGFAITLDGKMVRTPARLVLAVPTQALAQLVAAEWQAQGEEIDPMT 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D     T+  ++ +I+ F  +D I Y A+
Sbjct: 90  MPMTRLVNTALDGITGNTQA-ILDDILRFSSSDLICYRAD 128


>gi|402772316|ref|YP_006591853.1| ATP12 ATPase [Methylocystis sp. SC2]
 gi|401774336|emb|CCJ07202.1| ATP12 ATPase [Methylocystis sp. SC2]
          Length = 270

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 3/118 (2%)

Query: 12  PRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLAL 71
           P   + +++ +  A   PKRFYK+     + G Y I LD R + TP        S PLA 
Sbjct: 16  PEERDPVKAAREPARALPKRFYKEAVAAPAEGGYGIFLDGRPVNTPARRPLVAPSLPLAE 75

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           AIAAEW  Q ETI  +TM LT + NT +D    ++ + +    I+ +  +D I Y A 
Sbjct: 76  AIAAEWAKQGETIDPATMPLTKLMNTALDGVAGQMAEVE--AEIVKYAASDLICYRAG 131


>gi|254476219|ref|ZP_05089605.1| ATP12 ATPase [Ruegeria sp. R11]
 gi|214030462|gb|EEB71297.1| ATP12 ATPase [Ruegeria sp. R11]
          Length = 235

 Score = 73.6 bits (179), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+V + ++ G + + LD R++KTP      V S  +A AIAAEWDAQ E++  S
Sbjct: 5   KQKRFWKEVTVADTEGGFAVELDGRRIKTPAKAALVVPSRAMADAIAAEWDAQTESVDPS 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM  T   N  ID  +     ++   + ++ D+D + Y A+
Sbjct: 65  TMPTTRSANAAIDKVSH-QHGEVSDMLADYGDSDLLCYRAD 104


>gi|384536622|ref|YP_005720707.1| ATP12 ATPase [Sinorhizobium meliloti SM11]
 gi|336033514|gb|AEH79446.1| ATP12 ATPase [Sinorhizobium meliloti SM11]
          Length = 261

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK+     ++ G Y + LD R ++TP    F V +E LA  +AAEWDAQ + I  S
Sbjct: 30  PKRFYKQASAAPADDGGYAVLLDGRSVRTPAKRAFTVPTEKLAGLLAAEWDAQTDVIDPS 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M LT I NT ID    L    +  +I+ F+ +D + Y A+
Sbjct: 90  AMPLTRIVNTAIDGVA-LDDRAVFDDILRFVGSDLLCYRAD 129


>gi|190891933|ref|YP_001978475.1| chaperone protein [Rhizobium etli CIAT 652]
 gi|190697212|gb|ACE91297.1| putative chaperone protein [Rhizobium etli CIAT 652]
          Length = 261

 Score = 72.8 bits (177), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V + E  GD+ I+LD + ++TP   +  V +E LA  +AAEW AQ E I   T
Sbjct: 30  PKRFYAEVAVAEHEGDFAITLDGKMVRTPARQVLAVPTEALAQLVAAEWRAQGEEIDPVT 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T + NT +D      +  + ++I+ F  +D + Y A+
Sbjct: 90  MPATRLVNTALDGVATNAQA-IFEDILRFSSSDLLCYRAD 128


>gi|170580241|ref|XP_001895177.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Brugia malayi]
 gi|158597974|gb|EDP35976.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Brugia malayi]
          Length = 272

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 13  RLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA 72
           RL + I S K    E+ +  +K V  +     Y I LD   L TP     K+ SE LALA
Sbjct: 13  RLFSGISSTKNRFYEEARVVFKPVEEV-----YNIYLDKHCLVTPKRNPVKIYSEALALA 67

Query: 73  IAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           +A EW+ Q   ++ + M LT +  T  DNP  L K DL+  ++ FLD DT+LY
Sbjct: 68  VAQEWNMQTNELRVNLMRLTGLIFTATDNPMSLQKSDLLSQVLQFLDKDTVLY 120


>gi|452965913|gb|EME70930.1| F1-ATPase chaperone protein [Magnetospirillum sp. SO-1]
          Length = 237

 Score = 72.4 bits (176), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK   +   +G + I LD + +KTP   L  V S  LA AIA EW  Q E I+ STM
Sbjct: 7   KRFYKDSSVEVRDGGFAILLDGKAVKTPGARLLCVPSPRLAEAIAGEWRGQEEQIRPSTM 66

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHANF 129
            LT + +T +D   P R     + Q ++N+  TD + Y A  
Sbjct: 67  PLTQLASTALDRVGPER---AHITQQLMNYAGTDLLCYRAEI 105


>gi|424913832|ref|ZP_18337196.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM597]
 gi|392850008|gb|EJB02529.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM597]
          Length = 261

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V I    G + I+LD + ++TP   +  V ++ LA  +AAEW AQ E I   T
Sbjct: 30  PKRFYAEVAIAGHEGGFAITLDGKMVRTPARQVLAVPTQALARLVAAEWQAQGEEIDPVT 89

Query: 89  MHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D  + NR   F   ++I+ F  +D I Y A+
Sbjct: 90  MPVTRLVNTALDGVDANRQAIF---EDILRFSSSDLICYRAD 128


>gi|304391489|ref|ZP_07373431.1| hypothetical protein R2A130_0145 [Ahrensia sp. R2A130]
 gi|303295718|gb|EFL90076.1| hypothetical protein R2A130_0145 [Ahrensia sp. R2A130]
          Length = 265

 Score = 72.0 bits (175), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V + + +G++ + LD R +KTP      V ++P+   +AAEW+AQ E I   T
Sbjct: 32  PKRFYKAVELGDVDGEWRVLLDGRPVKTPGKNFLAVDNKPIMERLAAEWNAQGERIDPLT 91

Query: 89  MHLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
           M +T + NT +D     T+   V ++II F  TD + Y A 
Sbjct: 92  MPMTRLVNTALD--GVATEMQAVREDIIRFAGTDMLCYRAG 130


>gi|399036577|ref|ZP_10733611.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF122]
 gi|398065905|gb|EJL57517.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF122]
          Length = 261

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V I E +  + I LD + ++TP   L  V+++PLA  +  EW+AQ E I  ST
Sbjct: 30  PKRFYKTVTIRELDEGFSIELDGKAIRTPARKLLVVATKPLAELLVPEWEAQAELIDPST 89

Query: 89  MHLTAICNTVIDNPNRLTK--FDLVQNIINFLDTDTILYHAN 128
           M +T + NT ID     T+  FD   +I+ F  +D + Y A+
Sbjct: 90  MPVTRLVNTAIDGVATDTQAVFD---DILRFSSSDLLCYRAD 128


>gi|307106081|gb|EFN54328.1| hypothetical protein CHLNCDRAFT_135562 [Chlorella variabilis]
          Length = 284

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)

Query: 31  RFYKKVGILES--NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           RFYK V I ++   G Y++ LDHR L+TP      + S  LALAIAAEW+ Q + IQ  T
Sbjct: 52  RFYKTVHIRDALDQGGYQVMLDHRVLRTPARHPLVLPSRALALAIAAEWEWQIKRIQPFT 111

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTIL 124
           M L ++  T +D P    + ++V  ++ +L TD++L
Sbjct: 112 MPLMSLAATALDEPK--PRDEVVATMLQYLPTDSVL 145


>gi|312113466|ref|YP_004011062.1| ATP12 ATPase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218595|gb|ADP69963.1| ATP12 ATPase [Rhodomicrobium vannielii ATCC 17100]
          Length = 237

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK   + E +G ++I LD R +KTP G    V +  LA AIA EW+ Q ETI   ++
Sbjct: 10  KRFYKDATVAEHDGAFQIHLDGRTIKTPAGRALAVPTRGLADAIAGEWNEQGETIAPHSL 69

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHANF 129
             T + N+  D   P    + ++V  I++F  +D + Y A F
Sbjct: 70  FFTRLANSAADAVAPR---EAEVVDEIVSFAASDLLCYRAPF 108


>gi|209963756|ref|YP_002296671.1| hypothetical protein RC1_0419 [Rhodospirillum centenum SW]
 gi|209957222|gb|ACI97858.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 231

 Score = 71.2 bits (173), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KR Y++VG     G +E+ LD R LK+P      + +  LA A+AAEWDAQ ET++  +M
Sbjct: 2   KRVYREVGTAAVEGGWEVRLDGRSLKSPARAPLVLPTRALAEAVAAEWDAQTETVEPHSM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
            +  + +T +D   P R     +V  +  +  TD + Y A+
Sbjct: 62  PMMQLASTTVDRIVPQRAA---IVDGVAAYAGTDLLCYRAD 99


>gi|452752884|ref|ZP_21952623.1| ATP12 ATPase [alpha proteobacterium JLT2015]
 gi|451959706|gb|EMD82123.1| ATP12 ATPase [alpha proteobacterium JLT2015]
          Length = 229

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+K     ++  +++ LD R L+TP      + +E +A A+AAEWDAQ + I  ++M
Sbjct: 2   KRFYEKAAARRTDEGWQVELDGRPLRTPKRAPLILPTEAMAQAVAAEWDAQGDLIDPASM 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +T I N  ID+ +   +      I  + +TD + Y A+
Sbjct: 62  AMTGIANAAIDHVS-ADRLGFASRIAAYGETDLVCYRAS 99


>gi|372278303|ref|ZP_09514339.1| hypothetical protein OS124_01458 [Oceanicola sp. S124]
          Length = 240

 Score = 70.9 bits (172), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KP+ F+ +   + + G Y + LD R ++TP      V SEPLA A+A EW AQ E +  +
Sbjct: 5   KPRVFWTRSEAVPTEGGYTVQLDGRPVRTPAKAPLVVPSEPLAQALAGEWAAQAEVVVPA 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM LT   N+ ID  + + + ++ + +  + D D + Y A 
Sbjct: 65  TMPLTRTANSAIDKVS-VQRAEVAEMLAEYGDADLLCYRAE 104


>gi|424870799|ref|ZP_18294461.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae WSM1455]
 gi|393166500|gb|EJC66547.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae WSM1455]
          Length = 261

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V + E  G + I+LD + ++TP   +  V +E LA  +AAEW AQ E I   +
Sbjct: 30  PKRFYTEVSVAEHEGGFAITLDGKMVRTPARQVLAVPTEALARLVAAEWQAQGEEINPMS 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D I Y A 
Sbjct: 90  MPVTRLVNTALDGVTANAQA-IFEDILRFSSSDLICYRAE 128


>gi|84685383|ref|ZP_01013281.1| hypothetical protein 1099457000258_RB2654_10958 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666540|gb|EAQ13012.1| hypothetical protein RB2654_10958 [Rhodobacterales bacterium
           HTCC2654]
          Length = 238

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRF+K       +G Y + LD R ++TP    F V S  LA AIA EWDAQ + I  ST
Sbjct: 6   PKRFWKGTRADACDGGYTVYLDTRTVRTPAKAAFVVPSRALAEAIAVEWDAQTDKIDPST 65

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T   N+ ID   RL   ++   +  + D+D   Y A+
Sbjct: 66  MPMTRTANSAIDK-VRLQHAEVADLLAAYGDSDLTCYRAD 104


>gi|402593712|gb|EJW87639.1| hypothetical protein WUBG_01449 [Wuchereria bancrofti]
          Length = 266

 Score = 70.5 bits (171), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 13  RLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA 72
           RL + I S +    E+ +  +K V  +     Y I LD   L TP     ++ SE LALA
Sbjct: 13  RLFSGISSTRNRFYEEARVVFKPVEEV-----YNIYLDKHCLVTPKRNPVEIYSEALALA 67

Query: 73  IAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           +A EW+ Q   ++ + M LT +  T  DNP  L K DL+  ++ FLD DTILY
Sbjct: 68  VAQEWNMQTNELRVNLMRLTGLIFTATDNPMSLQKSDLLSQVLQFLDKDTILY 120


>gi|424887738|ref|ZP_18311341.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
 gi|393173287|gb|EJC73331.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WSM2012]
          Length = 261

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY  V + E    + ++LD + ++TP   +  V +E LA  +AAEW AQ E I   T
Sbjct: 30  PKRFYTDVSVAEHEDGFAVTLDGKTVRTPARQVLAVPTEALARLVAAEWRAQGEEIDPLT 89

Query: 89  MHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D  + NR   F   ++I+ F  +D I Y A+
Sbjct: 90  MPVTRLVNTALDGVDANRQAIF---EDILRFSSSDLICYRAD 128


>gi|218514819|ref|ZP_03511659.1| putative chaperone protein [Rhizobium etli 8C-3]
          Length = 237

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V + E  G + I+LD + ++TP   +  V +E LA  +AAEW AQ E I   T
Sbjct: 6   PKRFYAEVAVAEHEGGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEWRAQGEEIDPVT 65

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T + NT +D      +  + ++I+ F  +D + Y A+
Sbjct: 66  MPATRLVNTALDGVATNAQA-IFEDILRFSSSDLLCYRAD 104


>gi|86749457|ref|YP_485953.1| ATP12 ATPase [Rhodopseudomonas palustris HaA2]
 gi|86572485|gb|ABD07042.1| ATP12 ATPase [Rhodopseudomonas palustris HaA2]
          Length = 265

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY    I E+   + I+LD R +KTP        S  LA AIAAEW AQ E I   T
Sbjct: 29  PKRFYTTAAISETPDGFAITLDGRPIKTPTRNALAAPSRDLAEAIAAEWQAQQELIDPIT 88

Query: 89  MHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + N+VID    R+ +  +  +I  +  +D + Y A 
Sbjct: 89  MPLTRLANSVIDGVAGRIDE--VTDDIAKYFGSDLLFYRAG 127


>gi|417104035|ref|ZP_11961265.1| putative chaperone protein [Rhizobium etli CNPAF512]
 gi|327191040|gb|EGE58093.1| putative chaperone protein [Rhizobium etli CNPAF512]
          Length = 261

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V + E  G + I+LD + ++TP   +  V +E LA  +AAEW AQ E I   T
Sbjct: 30  PKRFYAEVAVAEHEGGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEWRAQGEEIDPVT 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T + NT +D      +  + ++I+ F  +D + Y A+
Sbjct: 90  MPATRLVNTALDGVATNAQA-IFEDILRFSSSDLLCYRAD 128


>gi|83312204|ref|YP_422468.1| chaperone required for the assembly of the mitochondrial F1-ATPase
           [Magnetospirillum magneticum AMB-1]
 gi|82947045|dbj|BAE51909.1| Chaperone required for the assembly of the mitochondrial F1-ATPase
           [Magnetospirillum magneticum AMB-1]
          Length = 237

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+      +G + I LD + +KTP G    V ++PLA AIA EW +Q E +  S+M
Sbjct: 7   KRFYKESAAELRDGGFAILLDGKPIKTPGGRPLSVPAKPLAEAIAGEWRSQGEQVLPSSM 66

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +T + +T ID   P R     +   ++N+  TD + Y A 
Sbjct: 67  PMTQLASTAIDRVGPER---PHITGQLMNYAGTDLLCYRAE 104


>gi|254465501|ref|ZP_05078912.1| ATP12 ATPase [Rhodobacterales bacterium Y4I]
 gi|206686409|gb|EDZ46891.1| ATP12 ATPase [Rhodobacterales bacterium Y4I]
          Length = 234

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K V + ++   + + LD R++KTP   L  V +  +A AIAAEWDAQ E++  S M
Sbjct: 7   KRFWKAVSVAQTGDGFAVELDGRRVKTPAKALLAVPTREMAEAIAAEWDAQAESVDPSAM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             T   N  ID      + ++   +  + D+D + Y A+
Sbjct: 67  PCTRSANAAIDKVTHQHR-EVAAMLAEYGDSDLLCYRAD 104


>gi|116252311|ref|YP_768149.1| chaperone protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256959|emb|CAK08053.1| putative chaperone protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 261

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V I +  G + I+LD + ++TP   +  V +E LA  +AAEW AQ E I   +
Sbjct: 30  PKRFYAEVSIAQHEGGFAITLDGKMVRTPARQVLAVPTEALARLVAAEWQAQGEEINPMS 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D I Y A 
Sbjct: 90  MPVTRLVNTALDGVTANAQA-IFEDILRFSSSDLICYRAE 128


>gi|378825698|ref|YP_005188430.1| ATP synthase mitochondrial F1 complex assembly factor 2 ATP12
           [Sinorhizobium fredii HH103]
 gi|365178750|emb|CCE95605.1| ATP synthase mitochondrial F1 complex assembly factor 2 ATP12
           homolog; Flags: Precursor [Sinorhizobium fredii HH103]
          Length = 289

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/106 (39%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 26  LEKP--KRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           ++KP  KRFYK VG+ ++  G + I LD R ++TP      V +  LA  +AAEWDAQ +
Sbjct: 53  MQKPLAKRFYKTVGVAQAEGGGHAILLDGRSVRTPARRPLAVPTVKLAELLAAEWDAQAD 112

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            I  S M LT I NT ID    L +  +  +I+ F  +D + Y A+
Sbjct: 113 IIDPSAMPLTRIVNTAIDG-VALDQRAVFDDILRFAGSDLLCYRAD 157


>gi|149203332|ref|ZP_01880302.1| hypothetical protein RTM1035_01905 [Roseovarius sp. TM1035]
 gi|149143165|gb|EDM31204.1| hypothetical protein RTM1035_01905 [Roseovarius sp. TM1035]
          Length = 240

 Score = 70.1 bits (170), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+ + G++E    + + LD R ++TP   +  V +  LA AIAAEWDAQ   I   
Sbjct: 5   KAKRFWTEAGVVEEGDGFGVRLDGRSVRTPAKAVLSVPTRALAEAIAAEWDAQEGKIDPG 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           TM  T   N  ID      K ++ + +  + D+D I Y A
Sbjct: 65  TMPFTRSANAAIDKVAH-QKSEVAEMLAAYGDSDLICYRA 103


>gi|424881734|ref|ZP_18305366.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WU95]
 gi|392518097|gb|EIW42829.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. trifolii WU95]
          Length = 261

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY  V + E  G + I+LD + ++TP   +  V +E LA  +AAEW AQ E I   +
Sbjct: 30  PKRFYTDVSVAEHEGGFAITLDGKMVRTPARQVLAVPTEALARLVAAEWQAQGEEINPVS 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D I Y A 
Sbjct: 90  MPVTRLVNTALDGVAANAQA-IFEDILRFSSSDLICYRAE 128


>gi|240136941|ref|YP_002961410.1| hypothetical protein MexAM1_META1p0170 [Methylobacterium extorquens
           AM1]
 gi|418058118|ref|ZP_12696098.1| ATP12 ATPase [Methylobacterium extorquens DSM 13060]
 gi|240006907|gb|ACS38133.1| conserved hypothetical protein with putative domain ATP12 chaperone
           protein [Methylobacterium extorquens AM1]
 gi|373568327|gb|EHP94276.1| ATP12 ATPase [Methylobacterium extorquens DSM 13060]
          Length = 267

 Score = 69.7 bits (169), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY + G+ E+ G + + LD R   TP      V    L  A+AAEW+AQ + I   T
Sbjct: 37  PKRFYAQAGLAEAEGGFRLVLDGRGANTPGRRPLVVPDRVLGEALAAEWEAQADVIDPRT 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + NT ID      +  + +++  F  TD + Y A 
Sbjct: 97  MPLTRLVNTTIDGVVE-RRAAVAEDLAAFAGTDLVAYRAG 135


>gi|405382857|ref|ZP_11036633.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF142]
 gi|397320618|gb|EJJ25050.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           CF142]
          Length = 261

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY+ V ++     + I+LD + ++TP   +  + +E LA  +AAEWDAQ E I  S 
Sbjct: 30  PKRFYQTVSVVPHEEAFAIALDGKAVRTPARQVLALPNEVLARLVAAEWDAQAEVIDPSM 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT ID     T+  ++++I+ F  +D + Y A 
Sbjct: 90  MPVTRLVNTAIDGVATDTQA-VLEDILRFSSSDLLCYRAE 128


>gi|218528373|ref|YP_002419189.1| ATP12 ATPase [Methylobacterium extorquens CM4]
 gi|218520676|gb|ACK81261.1| ATP12 ATPase [Methylobacterium extorquens CM4]
          Length = 267

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY + G+ E+ G + + LD R   TP      V    L  A+AAEW+AQ + I   T
Sbjct: 37  PKRFYAQAGLAEAEGGFRLVLDGRGANTPGRRPLVVPDRVLGEALAAEWEAQADVIDPRT 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + NT ID      +  + +++  F  TD + Y A 
Sbjct: 97  MPLTRLVNTTIDGVVE-RRAAVAEDLAAFAGTDLVAYRAG 135


>gi|163849733|ref|YP_001637776.1| ATP12 ATPase [Methylobacterium extorquens PA1]
 gi|163661338|gb|ABY28705.1| ATP12 ATPase [Methylobacterium extorquens PA1]
          Length = 267

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY + G+ E+ G + + LD R   TP      V    L  A+AAEW+AQ + I   T
Sbjct: 37  PKRFYAQAGLAEAEGGFRLVLDGRGANTPGRRPLVVPDRVLGEALAAEWEAQADVIDPRT 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + NT ID      +  + +++  F  TD + Y A 
Sbjct: 97  MPLTRLVNTTIDGVVE-RRAAVAEDLAAFAGTDLVAYRAG 135


>gi|56695432|ref|YP_165780.1| hypothetical protein SPO0518 [Ruegeria pomeroyi DSS-3]
 gi|56677169|gb|AAV93835.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 238

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KPKRF+K+  + E+   Y + LD R ++TP      + +  LA AIAAEWDAQ   +   
Sbjct: 8   KPKRFWKQAAVAETAEGYAVELDGRPVRTPAKAPLLLPTRALAEAIAAEWDAQESEVDPI 67

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M  T   N  ID   R+ + ++   +  + D+D + Y A+
Sbjct: 68  NMPFTRTANAAIDK-VRIQQAEVADMLAAYGDSDLLCYRAD 107


>gi|392382039|ref|YP_005031236.1| conserved protein of unknown function [Azospirillum brasilense
           Sp245]
 gi|356877004|emb|CCC97805.1| conserved protein of unknown function [Azospirillum brasilense
           Sp245]
          Length = 232

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 30  KRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           KRFYK   + E+  G +E+ LD+R +++P       +S PLA A+AAEWDAQ E I   +
Sbjct: 2   KRFYKTASVDEAAGGGFEVRLDNRPIRSPAKAPLVFASWPLAQAVAAEWDAQPEDIAPDS 61

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M L  + +T +D   +  +  +V  +  + +TD + Y A 
Sbjct: 62  MPLMQLASTAVDLIGK-GRAAIVDGVAAYAETDLLCYRAE 100


>gi|288958956|ref|YP_003449297.1| chaperone required for the assembly of the mitochondrial F1-ATPase
           [Azospirillum sp. B510]
 gi|288911264|dbj|BAI72753.1| chaperone required for the assembly of the mitochondrial F1-ATPase
           [Azospirillum sp. B510]
          Length = 231

 Score = 69.3 bits (168), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK  G+ E+ G +++ LD R +++P      + S PLA  +A EW AQ E I   +M
Sbjct: 2   KRFYKAAGVGETEGGFQVELDGRPVRSPAKAPLVLPSRPLAQGVADEWAAQGERIDAHSM 61

Query: 90  HLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            L  + +T ID  P +  + D+V  +  +  TD + Y A 
Sbjct: 62  PLMQLSSTAIDLIPAK--RPDIVGAVSAYAGTDLLCYRAE 99


>gi|407776147|ref|ZP_11123436.1| chaperone [Thalassospira profundimaris WP0211]
 gi|407280863|gb|EKF06430.1| chaperone [Thalassospira profundimaris WP0211]
          Length = 240

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 7/104 (6%)

Query: 30  KRFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRFYKK      E+   + + LD R +KTP    F + SE LA  IAAEWDAQ E +Q S
Sbjct: 10  KRFYKKADASADETGAGWRVLLDGRAVKTPAKADFLLPSEVLAREIAAEWDAQGEKVQPS 69

Query: 88  TMHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHANF 129
           TM +  +  T ID   PNR     ++  +  +  +D + Y A+F
Sbjct: 70  TMPIMQLAATAIDRVRPNRDA---VIAELTGYGRSDLLCYRASF 110


>gi|85703850|ref|ZP_01034953.1| hypothetical protein ROS217_12666 [Roseovarius sp. 217]
 gi|85671170|gb|EAQ26028.1| hypothetical protein ROS217_12666 [Roseovarius sp. 217]
          Length = 240

 Score = 68.9 bits (167), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+ G++E +  + + LD R ++TP      V +  LA AIAAEWDAQ   I  +
Sbjct: 5   KAKRFWKEAGVVEDDAGFGVRLDGRVVRTPAKATLIVPTRALAEAIAAEWDAQDGKIDPN 64

Query: 88  TMHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHA 127
           TM  T   N  +D   P R    ++V+ +  + D+D I Y A
Sbjct: 65  TMPCTRSANAALDKVAPQR---DEVVEMLAAYGDSDLICYRA 103


>gi|188579625|ref|YP_001923070.1| ATP12 ATPase [Methylobacterium populi BJ001]
 gi|179343123|gb|ACB78535.1| ATP12 ATPase [Methylobacterium populi BJ001]
          Length = 267

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY K G+ E+ G Y + LD R   TP      V    L  A+AAEW AQ   I   T
Sbjct: 37  PKRFYAKAGLAEAEGGYRLVLDGRGANTPGRRPLVVPDIGLGEALAAEWAAQETVIDPRT 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + NT ID      +  + +++  F  TD + Y A 
Sbjct: 97  MPLTRLVNTTIDGVVE-RRAAVAEDLGAFAGTDLVAYRAG 135


>gi|46202488|ref|ZP_00208540.1| COG5387: Chaperone required for the assembly of the mitochondrial
           F1-ATPase [Magnetospirillum magnetotacticum MS-1]
          Length = 237

 Score = 68.9 bits (167), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK       +G Y I LD + +KTP G    V S  LA AIA EW  Q E I  STM
Sbjct: 7   KRFYKDSSAEPRDGGYAIFLDGKAIKTPGGRPLSVPSARLADAIAGEWREQGEQILPSTM 66

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + +T +D   P R     +   ++N+  TD + Y A+
Sbjct: 67  PLTQLASTALDRVGPER---PHITAQLMNYAGTDLLCYRAD 104


>gi|374292580|ref|YP_005039615.1| hypothetical protein AZOLI_2171 [Azospirillum lipoferum 4B]
 gi|357424519|emb|CBS87398.1| conserved protein of unknown function [Azospirillum lipoferum 4B]
          Length = 231

 Score = 68.6 bits (166), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK  G+ E+ G + + LD R +++P        S PLA  +A EW AQ + I   +M
Sbjct: 2   KRFYKAAGVGETEGGFRVELDGRPVRSPAKAPLVFPSRPLAQGVADEWAAQGDQIDAHSM 61

Query: 90  HLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            L  + +T +D  P +  + D+VQ I  +  TD + Y A 
Sbjct: 62  PLMQLSSTAVDLIPAK--RSDIVQAISAYAGTDLLCYRAE 99


>gi|227821786|ref|YP_002825756.1| chaperone protein [Sinorhizobium fredii NGR234]
 gi|227340785|gb|ACP25003.1| putative chaperone protein [Sinorhizobium fredii NGR234]
          Length = 260

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 26  LEKP--KRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           ++KP  KRFYK VG+  +  G + + LD R ++TP      V +  LA  +AAEWDAQ E
Sbjct: 24  MQKPLAKRFYKTVGVAPAEGGGHAVLLDGRSVRTPAKRPLAVPTRKLAELLAAEWDAQAE 83

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            I  S M LT + NT +D    L +  +  +I+ F  +D + Y A+
Sbjct: 84  IIDPSAMPLTRLVNTALDGVA-LDQRAVFDDILRFTGSDLLCYRAD 128


>gi|218659527|ref|ZP_03515457.1| hypothetical protein RetlI_07618 [Rhizobium etli IE4771]
          Length = 187

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V + +  G + I+LD + ++TP   +  V +E LA  +AAEW AQ + I   T
Sbjct: 30  PKRFYAEVAVAQHEGGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEWQAQGQEIDPVT 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D + Y A+
Sbjct: 90  MPVTRLVNTALDGVATNAQA-IFEDILRFSSSDLLCYRAD 128


>gi|241204805|ref|YP_002975901.1| ATP12 ATPase [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240858695|gb|ACS56362.1| ATP12 ATPase [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 261

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY  V + E  G + I+LD + ++TP   +  V +E LA  +AAEW AQ E I   +
Sbjct: 30  PKRFYTDVSVAEHEGGFAITLDGKLVRTPARQVLAVPTEALARLVAAEWQAQGEEINPVS 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D I Y A 
Sbjct: 90  MPVTRLVNTALDGVAANAQA-IFEDILRFSASDLICYRAE 128


>gi|86357849|ref|YP_469741.1| hypothetical protein RHE_CH02234 [Rhizobium etli CFN 42]
 gi|86281951|gb|ABC91014.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 261

 Score = 68.6 bits (166), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V + +  G + I+LD + ++TP   +  V +E LA  +AAEW AQ + I   T
Sbjct: 30  PKRFYAEVAVADHEGGFAITLDGKMVRTPARQVLAVPTEALAQLVAAEWQAQGQEIDPVT 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D + Y A+
Sbjct: 90  MPVTRLVNTALDGVATNAQA-IFEDILRFSSSDLLCYRAD 128


>gi|407771053|ref|ZP_11118416.1| hypothetical protein TH3_16194 [Thalassospira xiamenensis M-5 = DSM
           17429]
 gi|407285942|gb|EKF11435.1| hypothetical protein TH3_16194 [Thalassospira xiamenensis M-5 = DSM
           17429]
          Length = 264

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 30  KRFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRFYKK   +  E    + I LD R +K+P+   F +S+E LA  IAAEWDAQ E +  +
Sbjct: 32  KRFYKKAEAVRDEDAQGWRIHLDGRPVKSPSKAEFVLSAEQLAHEIAAEWDAQGEKVLPT 91

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
           TM +  +  T ID   R  +F ++  +  F  +D + Y A+F
Sbjct: 92  TMPIMQLAATAIDR-VRPHRFGVIAELTGFGRSDLLCYRASF 132


>gi|195999772|ref|XP_002109754.1| hypothetical protein TRIADDRAFT_21486 [Trichoplax adhaerens]
 gi|190587878|gb|EDV27920.1| hypothetical protein TRIADDRAFT_21486, partial [Trichoplax
           adhaerens]
          Length = 240

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V I    G + I LD + LKT NG    V +E LA+A+A EW  Q + I    M
Sbjct: 4   KRFYKNVTIETIQGGFLIKLDSKPLKTRNGQQLIVPNELLAVAVATEWAVQGKKIAPHNM 63

Query: 90  HLTAICNTVIDNP-NRLTKFDLVQNIINFLDTDTILYHA 127
            LT +CN  +D P N   + +  Q I+ +L TDTI   A
Sbjct: 64  PLTVMCNGALDRPRNDNLRVETAQ-IMEYLATDTICIRA 101


>gi|92117128|ref|YP_576857.1| ATP12 ATPase [Nitrobacter hamburgensis X14]
 gi|91800022|gb|ABE62397.1| ATP12 ATPase [Nitrobacter hamburgensis X14]
          Length = 260

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           +PKRFY   G+ E    + + LD + ++TP+  L    +  +A +IAAEW AQ + I   
Sbjct: 27  QPKRFYTSAGVREVPEGFAVLLDDKPVRTPSRNLLAAPAREIAASIAAEWQAQQDVINPM 86

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM +T + N+VID    R+    +V +I+ +  +D + Y A 
Sbjct: 87  TMPMTRLANSVIDGVAGRVDA--VVADIVKYFGSDLLFYRAG 126


>gi|254500769|ref|ZP_05112920.1| ATP12 chaperone protein [Labrenzia alexandrii DFL-11]
 gi|222436840|gb|EEE43519.1| ATP12 chaperone protein [Labrenzia alexandrii DFL-11]
          Length = 257

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           + S  E PKRFYK    +E+   + I LD R +KTP      + +E L  A+AAEWDAQ 
Sbjct: 22  ELSRRELPKRFYKSAEHIETEDGFAIHLDGRPVKTPAKSTLLLPTEVLGAAVAAEWDAQE 81

Query: 82  ETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           + I  + M LT I N+  D   NR  +  +  +I  F   D + Y A+
Sbjct: 82  KEINPARMPLTRIANSAQDAVANRFGE--VADDITGFAANDALCYRAD 127


>gi|399991419|ref|YP_006571659.1| hypothetical protein PGA1_c01970 [Phaeobacter gallaeciensis DSM
           17395 = CIP 105210]
 gi|398655974|gb|AFO89940.1| hypothetical protein PGA1_c01970 [Phaeobacter gallaeciensis DSM
           17395 = CIP 105210]
          Length = 235

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K V + E+   + + LD R++KTP      V    +A AIAAEWDAQ E++  +
Sbjct: 5   KQKRFWKAVSVAETEDGFAVELDGRRVKTPAKAALAVPGREMAEAIAAEWDAQTESVNPN 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
           TM +T   N  ID         +   +  + D+D + Y A  
Sbjct: 65  TMPVTRSANAAIDKVTH-QHAAVADMLAEYGDSDLLCYRAEM 105


>gi|114798619|ref|YP_759728.1| ATP12 chaperone family protein [Hyphomonas neptunium ATCC 15444]
 gi|114738793|gb|ABI76918.1| ATP12 chaperone family protein [Hyphomonas neptunium ATCC 15444]
          Length = 242

 Score = 68.2 bits (165), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 2/110 (1%)

Query: 20  SCKYSALEKPKRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD 78
           S K SA E PKRFY  V    +  G ++I LD R +KTP   L ++ +E LA  +A EW 
Sbjct: 2   SDKPSAFEHPKRFYTDVTAEPAEGGGWQILLDGRSVKTPGRALLRLPTEALAQEVAEEWA 61

Query: 79  AQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            Q   I    MHLT + N  ID    + + ++ + +  + +TD + + A 
Sbjct: 62  EQQTYIHLIGMHLTRLANVAIDRTPEIRE-EMAEEVARYCETDLLCHIAE 110


>gi|409437484|ref|ZP_11264598.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
 gi|408750912|emb|CCM75756.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
          Length = 254

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V + + +  + I LD + ++TP   L  V+++PLA  +  EW+AQ E I  S 
Sbjct: 23  PKRFYKTVTVAKLDEGFLIELDGKAIRTPARKLLVVATKPLAELVMGEWEAQAEHIDPSA 82

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT ID     T+  + ++I+ F  +D + Y A+
Sbjct: 83  MPVTRLVNTAIDGVATDTQA-VFEDILRFSSSDLLCYRAD 121


>gi|409082665|gb|EKM83023.1| hypothetical protein AGABI1DRAFT_69157 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 297

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 61/99 (61%), Gaps = 3/99 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGV-LFKVSSEP-LALAIAAEWDAQHETIQRS 87
           KRF+KKV I +      ++LD R LKTP+G  LF  SS+  LA  IAAEWD Q   I+  
Sbjct: 61  KRFWKKVDIEKRGDSLAVTLDTRPLKTPSGTPLFVPSSKDLLATLIAAEWDHQTTLIKPH 120

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILY 125
            + +T++ +  ID   +  T+ ++ + ++N+LDTDTI +
Sbjct: 121 ALPMTSLASRAIDGMSDASTRAEVQETLLNYLDTDTICF 159


>gi|169854007|ref|XP_001833681.1| hypothetical protein CC1G_03898 [Coprinopsis cinerea okayama7#130]
 gi|116505331|gb|EAU88226.1| hypothetical protein CC1G_03898 [Coprinopsis cinerea okayama7#130]
          Length = 289

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 62/99 (62%), Gaps = 3/99 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K+VGI +   D+ ++LD R LKTP+G  +L   +   +A  IAAEWD Q   ++  
Sbjct: 56  KRFWKEVGIGKKGDDFTVTLDKRALKTPSGNTLLLPSNKGLVAALIAAEWDHQETLLKPH 115

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILY 125
            + +T+I +  ID+     T+ ++ + ++N+L+TDT+ +
Sbjct: 116 ALPMTSIVSRAIDSLAEDSTRQEVEKTLLNYLETDTVCF 154


>gi|119383544|ref|YP_914600.1| ATP12 ATPase [Paracoccus denitrificans PD1222]
 gi|119373311|gb|ABL68904.1| ATP12 ATPase [Paracoccus denitrificans PD1222]
          Length = 236

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K +RF+  VGI +  G + + LD R L+TP     ++ +E LALAIA EW A  E I  +
Sbjct: 5   KARRFWASVGIHKEEGGWAVLLDERPLRTPGKQPLRLPTEALALAIAEEWQAVQEVIDPN 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            M LT   N+ I+      +FD V  ++ ++  TD + Y A+
Sbjct: 65  AMPLTRSANSAIE--KVAPQFDAVAAMLGDYGGTDLLSYRAD 104


>gi|170785112|pdb|2ZD2|A Chain A, D202k Mutant Of P. Denitrificans Atp12p
 gi|170785113|pdb|2ZD2|B Chain B, D202k Mutant Of P. Denitrificans Atp12p
          Length = 234

 Score = 67.8 bits (164), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K +RF+  VGI +  G + + LD R L+TP     ++ +E LALAIA EW A  E I  +
Sbjct: 4   KARRFWASVGIHKEEGGWAVLLDERPLRTPGKQPLRLPTEALALAIAEEWQAVQEVIDPN 63

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            M LT   N+ I+      +FD V  ++ ++  TD + Y A+
Sbjct: 64  AMPLTRSANSAIE--KVAPQFDAVAAMLGDYGGTDLLSYRAD 103


>gi|169791680|pdb|2P4X|A Chain A, Crystal Structure Of Atp12 From Paracoccus Denitrificans
 gi|169791681|pdb|2P4X|B Chain B, Crystal Structure Of Atp12 From Paracoccus Denitrificans
 gi|170785008|pdb|2R31|A Chain A, Crystal Structure Of Atp12p From Paracoccus Denitrificans
          Length = 239

 Score = 67.8 bits (164), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K +RF+  VGI +  G + + LD R L+TP     ++ +E LALAIA EW A  E I  +
Sbjct: 8   KARRFWASVGIHKEEGGWAVLLDERPLRTPGKQPLRLPTEALALAIAEEWQAVQEVIDPN 67

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            M LT   N+ I+      +FD V  ++ ++  TD + Y A+
Sbjct: 68  AMPLTRSANSAIE--KVAPQFDAVAAMLGDYGGTDLLSYRAD 107


>gi|99080134|ref|YP_612288.1| ATP12 ATPase [Ruegeria sp. TM1040]
 gi|99036414|gb|ABF63026.1| ATP12 ATPase [Ruegeria sp. TM1040]
          Length = 234

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K V + E +  + ++LD R++KTP      V +  LA AIAAEWDAQ E I   
Sbjct: 5   KQKRFWKAVSVEEDDSGFAVALDGRRVKTPAKTALLVPTRALADAIAAEWDAQEEQIDPL 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
           +M  T   N  ID      +F  V +++  + D+D + Y A 
Sbjct: 65  SMPYTRSANAAIDKVA--VQFAEVADMLAEYGDSDLLCYRAE 104


>gi|255082692|ref|XP_002504332.1| predicted protein [Micromonas sp. RCC299]
 gi|226519600|gb|ACO65590.1| predicted protein [Micromonas sp. RCC299]
          Length = 244

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 4/98 (4%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQRS 87
           RFYKKV ++  E+ G + ++LD R LKTP      V S+ LA+AIAAEW+ Q   +I+  
Sbjct: 9   RFYKKVEVVRVENGGGWGVALDGRALKTPKRAALAVPSKSLAMAIAAEWEWQSGRSIRPF 68

Query: 88  TMHLTAICNTVIDNPNRLTKFDL-VQNIINFLDTDTIL 124
           TM L A+  T ID   +    D  V+ ++ F  TD +L
Sbjct: 69  TMPLMALVATSIDQMTQEEVRDFHVRKLLEFFPTDVVL 106


>gi|259416378|ref|ZP_05740298.1| ATP12 ATPase [Silicibacter sp. TrichCH4B]
 gi|259347817|gb|EEW59594.1| ATP12 ATPase [Silicibacter sp. TrichCH4B]
          Length = 234

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+V + E    + ++LD R++KTP      V +  LA AIAAEWDAQ E I   
Sbjct: 5   KQKRFWKEVSVEEDGAGFAVALDGRRVKTPAKTALVVPTRALAEAIAAEWDAQEEQIAPL 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
           +M  T   N  ID      +F  V +++  + D+D + Y A 
Sbjct: 65  SMPNTRSANAAIDKVA--VQFAEVADMLAEYGDSDLLCYRAE 104


>gi|254558794|ref|YP_003065889.1| hypothetical protein METDI0154 [Methylobacterium extorquens DM4]
 gi|254266072|emb|CAX21824.1| conserved hypothetical protein; putative domain ATP12 chaperone
           protein [Methylobacterium extorquens DM4]
          Length = 267

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY + G+ E+ G + + LD R   TP      V    L  A+ AEW+AQ + I   T
Sbjct: 37  PKRFYAQAGLAEAEGGFRLVLDGRGANTPGRRPLVVPDRVLGEALVAEWEAQADVIDPRT 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + NT ID      +  + +++  F  TD + Y A 
Sbjct: 97  MPLTRLVNTTIDGVVE-RRAAVAEDLAAFAGTDLVAYRAG 135


>gi|402848983|ref|ZP_10897228.1| hypothetical protein A33M_2096 [Rhodovulum sp. PH10]
 gi|402500738|gb|EJW12405.1| hypothetical protein A33M_2096 [Rhodovulum sp. PH10]
          Length = 260

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY  V + E+   + I LD R ++TP      + +  LA  +AAEW AQ ETI  + M
Sbjct: 30  KRFYTDVSVRETAAGFAIELDSRPVRTPARETLALPNGALAETVAAEWRAQGETIDPAKM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + N VID        ++ +++  +L +D ++Y A+
Sbjct: 90  PLTRLANVVIDAVGAAAD-EIAEDVARYLGSDLLVYRAD 127


>gi|254294407|ref|YP_003060430.1| ATP12 ATPase [Hirschia baltica ATCC 49814]
 gi|254042938|gb|ACT59733.1| ATP12 ATPase [Hirschia baltica ATCC 49814]
          Length = 242

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 2/106 (1%)

Query: 24  SALEKPKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           +A ++ K+FYK+  I +  +G++ ISLD R+LKTP      + +E LA A+A EW  Q E
Sbjct: 6   NAGQRMKKFYKQAAIEKLGDGNWTISLDGRQLKTPAKKPLSLPTEELAEAVAGEWADQVE 65

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            I  +TMH+T + N  ID    L + ++   +  + +TD + + A 
Sbjct: 66  FIDVATMHITRLVNVAIDR-TPLARPEMADEVARYAETDLVSHLAE 110


>gi|430003656|emb|CCF19445.1| conserved protein of unknown function [Rhizobium sp.]
          Length = 262

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK+V + E  G Y I LD R ++TP        +  LA  +  EWDAQ E +   T
Sbjct: 29  PKRFYKQVSVGEDEGGYAILLDGRPVRTPAKNPLIAPTAALAELMRVEWDAQDEFVDPQT 88

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT ID    L    + ++I+ F  +D + Y A+
Sbjct: 89  MPVTKLVNTAIDG-VALDPQAVFEDILRFSASDLLCYRAD 127


>gi|302690960|ref|XP_003035159.1| hypothetical protein SCHCODRAFT_65870 [Schizophyllum commune H4-8]
 gi|300108855|gb|EFJ00257.1| hypothetical protein SCHCODRAFT_65870 [Schizophyllum commune H4-8]
          Length = 283

 Score = 67.4 bits (163), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 3/102 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEWDAQHETIQRS 87
           KRF+K V + E +G Y ++LD R LKTP+G    +     A+A  IAAEW++Q   ++  
Sbjct: 51  KRFWKDVDVAERDGGYVVTLDRRALKTPSGNTLLLPRNKFAVASLIAAEWESQSTVLKPH 110

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQ-NIINFLDTDTILYHAN 128
            + +T++ +  ID     T+   VQ  ++++L TDTI +H +
Sbjct: 111 ALPITSLASRAIDAFTNATERAQVQKGLLDYLHTDTICFHQD 152


>gi|222148669|ref|YP_002549626.1| hypothetical protein Avi_2263 [Agrobacterium vitis S4]
 gi|221735655|gb|ACM36618.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 261

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V I      + + LD + +KTP      + +EPLA  +A EW  Q E I  +T
Sbjct: 30  PKRFYKDVTIAAGQDGHAVLLDGKTVKTPARNALVLPTEPLAALVAGEWQGQGEFIDPAT 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D  +  T+ +++ +I+ F   D + Y A+
Sbjct: 90  MPVTRLVNTALDAVSANTQ-EVLDDIVRFCGNDMLCYRAD 128


>gi|170744413|ref|YP_001773068.1| ATP12 ATPase [Methylobacterium sp. 4-46]
 gi|168198687|gb|ACA20634.1| ATP12 ATPase [Methylobacterium sp. 4-46]
          Length = 262

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 3/117 (2%)

Query: 12  PRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLAL 71
           P  + + ++    AL  PKRFY + G  E+   + + LD R  +TP   +  V    +A 
Sbjct: 17  PDPLRAARTASRPAL--PKRFYAEAGTAEAEDGHRLVLDGRPARTPGRRVVAVPQPAVAR 74

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           A+A EW AQ E I  + M LT + NT +D      +  +VQ+I  +  +D + Y A 
Sbjct: 75  ALAEEWGAQAEVIDPARMPLTRLVNTALDGVAE-RREAVVQDIAAYAGSDLLAYRAG 130


>gi|392567583|gb|EIW60758.1| ATP12-domain-containing protein [Trametes versicolor FP-101664 SS1]
          Length = 287

 Score = 67.0 bits (162), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 4/103 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K VGI +  G Y ++LD R LKTP G  ++       +A  +A+EW+ Q   ++  
Sbjct: 54  KRFWKSVGIDKQQGGYAVTLDSRPLKTPGGNPMIIPPQKRLVAALVASEWENQDTVLKPH 113

Query: 88  TMHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            + +T+I +  ID    +  T+ ++   ++ + +TDTI YHA+
Sbjct: 114 ALPMTSIVSRAIDAFRDDENTRNEVRAQLLKYFETDTIFYHAD 156


>gi|148555624|ref|YP_001263206.1| ATP12 ATPase [Sphingomonas wittichii RW1]
 gi|148500814|gb|ABQ69068.1| ATP12 ATPase [Sphingomonas wittichii RW1]
          Length = 230

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V +    G + I LD R +KTP      + +  LA A+AAEWDAQ E I    M
Sbjct: 2   KRFYKQVSVEPVAGGHAIRLDGRPVKTPARADLTLPTSALAHAVAAEWDAQAEEIDPRRM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + N  ID   P+        + +  + +TD + Y A+
Sbjct: 62  PLTGLANAAIDRIAPDPAA---FARGLAAYAETDLLCYRAD 99


>gi|400755739|ref|YP_006564107.1| hypothetical protein PGA2_c28910 [Phaeobacter gallaeciensis 2.10]
 gi|398654892|gb|AFO88862.1| hypothetical protein PGA2_c28910 [Phaeobacter gallaeciensis 2.10]
          Length = 235

 Score = 67.0 bits (162), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K V + E+   + + LD R++KTP      V    +A AIAAEWDAQ E++  +
Sbjct: 5   KQKRFWKAVSVAETEDGFAVELDGRRVKTPAKAALAVPIREMAEAIAAEWDAQTESVNPN 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
           TM +T   N  ID         +   +  + D+D + Y A  
Sbjct: 65  TMPVTRSANAAIDKVTH-QHAAVADMLAEYGDSDLLCYRAEM 105


>gi|392576957|gb|EIW70087.1| hypothetical protein TREMEDRAFT_29554 [Tremella mesenterica DSM
           1558]
          Length = 290

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 4/100 (4%)

Query: 30  KRFYKKVGI-LESNGDYEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQHETIQR 86
           +RF+K V I  E NG Y I+LDHR LKTP G    +  E   LA+ IA EW+ Q E +++
Sbjct: 57  RRFWKTVNIHSEPNGHYLIALDHRHLKTPAGTKLVIPKERRLLAVLIANEWENQDEVLKQ 116

Query: 87  STMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILY 125
             + +T++ +  ID   +   + +++  ++ +L+TDT+L+
Sbjct: 117 HALPVTSLASRAIDGLRDDKIRVEVIDALMKYLETDTVLF 156


>gi|254470461|ref|ZP_05083865.1| ATP12 ATPase [Pseudovibrio sp. JE062]
 gi|211960772|gb|EEA95968.1| ATP12 ATPase [Pseudovibrio sp. JE062]
          Length = 264

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 8/118 (6%)

Query: 15  INSIQSCK-YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTP--NGVLFKVSSEPLAL 71
           ++++Q+ + ++    PKRFY++V + + +  Y + LD R +KTP  N ++FK   E +A 
Sbjct: 17  VDAVQAAREHTKRNLPKRFYERVSVEQKDDVYAVLLDGRSIKTPGRNALVFK--DEVIAE 74

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKF-DLVQNIINFLDTDTILYHAN 128
            +AAEW+ Q E I   TM LT I ++ ID      KF D+   I  +   D + Y A+
Sbjct: 75  GVAAEWELQEEEIDPGTMPLTRIAHSAIDAVEE--KFADVADEITRYAGNDHLCYRAD 130


>gi|163745574|ref|ZP_02152934.1| ATP12 chaperone protein, putative [Oceanibulbus indolifex HEL-45]
 gi|161382392|gb|EDQ06801.1| ATP12 chaperone protein, putative [Oceanibulbus indolifex HEL-45]
          Length = 237

 Score = 66.6 bits (161), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K   ++E +G + + LD R++KTP      + +  +A A+AAEW AQ + I   
Sbjct: 5   KAKRFWKDADVVEVDGGFTVELDGRRVKTPAKRPLTLPTRAMAEAVAAEWQAQEKQIDPR 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM +T   N  ID    + + ++V  +  + D+D + Y A+
Sbjct: 65  TMPVTKTANAAIDKVA-VQQDEVVAMLAAYGDSDLLCYRAD 104


>gi|342320512|gb|EGU12452.1| Hypothetical Protein RTG_01486 [Rhodotorula glutinis ATCC 204091]
          Length = 675

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 22/127 (17%)

Query: 25  ALEKPKRFYKKVGIL-ESNGDYEISLDHRKLKTPNGVLFKVSSE--PLALAIAAEWDAQH 81
           A ++ KRF+K VG+     G++ + LD R LKTP GV   V  E  P+AL IA EW+ Q 
Sbjct: 41  AEKQMKRFWKTVGVEGRPEGNFAVLLDKRTLKTPGGVPLLVPKERLPVALCIADEWENQK 100

Query: 82  ETIQRSTMHL------------------TAICNTVIDN-PNRLTKFDLVQNIINFLDTDT 122
             ++  T+ +                  T+I    ID   N  T+ D+V  ++ +LDTDT
Sbjct: 101 SVLKPHTLPMVGRTHFYRCGARLTVVSQTSIAARAIDGLNNESTRKDVVAYLLRYLDTDT 160

Query: 123 ILYHANF 129
           + +H  F
Sbjct: 161 VCFHEEF 167


>gi|346991291|ref|ZP_08859363.1| hypothetical protein RTW15_00220 [Ruegeria sp. TW15]
          Length = 235

 Score = 66.2 bits (160), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KPKRF+    ++E +  Y ++LD R++KTP      + +  +A AIA EWDAQ + +  +
Sbjct: 5   KPKRFWTSGAVVEIDNGYTVALDGRRVKTPAKAALVLPTHAMAQAIADEWDAQEKEVDPT 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           TM  T   N  IDN       ++   + ++ D+D + Y A
Sbjct: 65  TMPFTRSANAAIDNVQH-QHGEVADMLADYGDSDLLCYRA 103


>gi|395330232|gb|EJF62616.1| ATP12-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
          Length = 287

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 3/102 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQHETIQRS 87
           KRF+K V I + +G Y ++LD R LKTP+G    +  E   +A  IA+EW+ Q   ++  
Sbjct: 55  KRFWKNVEIEKRDGGYAVTLDKRPLKTPSGKRLIIPPEKRLVAALIASEWENQETLLKPH 114

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
            + +T+I +  +D   +  T+ ++   ++ + +TDTI YHA 
Sbjct: 115 ALPMTSIASRALDAFEDEPTREEVRAQLLKYFETDTIFYHAT 156


>gi|426200533|gb|EKV50457.1| hypothetical protein AGABI2DRAFT_200172 [Agaricus bisporus var.
           bisporus H97]
          Length = 297

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGV-LFKVSSEP-LALAIAAEWDAQHETIQRS 87
           KRF+KKV I +      ++LD R LKTP G  LF  SS+  LA  IAAEWD Q   I+  
Sbjct: 61  KRFWKKVDIEKRGDSLAVTLDTRPLKTPLGTPLFVPSSKDLLATLIAAEWDHQTTLIKPH 120

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILY 125
            + +T++ +  ID   +  T+ ++ + ++N+LDTDTI +
Sbjct: 121 ALPMTSLASRAIDGMSDASTRAEVQETLLNYLDTDTICF 159


>gi|58264900|ref|XP_569606.1| hypothetical protein CNC03060 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134109621|ref|XP_776925.1| hypothetical protein CNBC4150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259605|gb|EAL22278.1| hypothetical protein CNBC4150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57225838|gb|AAW42299.1| hypothetical protein CNC03060 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 292

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 61/100 (61%), Gaps = 4/100 (4%)

Query: 30  KRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQHETIQR 86
           +RF+K V I  +  D Y I+LDHR LKTP G   ++  E   LA  IA EW+ Q E +++
Sbjct: 59  RRFWKTVNISATPSDGYLITLDHRALKTPFGAKLEIPKERGLLAALIANEWENQDEVLKQ 118

Query: 87  STMHLTAICNTVIDNPNR-LTKFDLVQNIINFLDTDTILY 125
             + +T++ +  ID  +   T+  +++ ++ +L+TDTILY
Sbjct: 119 HALPVTSLASRAIDGLSEGPTRPAVIEALLQYLETDTILY 158


>gi|393238522|gb|EJD46058.1| ATP12-domain-containing protein [Auricularia delicata TFB-10046
           SS5]
          Length = 280

 Score = 65.9 bits (159), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 59/100 (59%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWDAQHETIQRS 87
           KRF+K   + E +  Y I+LD R LKTP G + ++  +   LA  IA EWD Q + I+  
Sbjct: 48  KRFWKDADLQEQSHAYHITLDKRPLKTPGGNVLEIPKTKRLLATMIAYEWDNQEKLIKPH 107

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            + LT++    ID+  +  T+ ++ + ++ +LDTD+I +H
Sbjct: 108 ALPLTSLAARAIDDMQSEKTRAEVREALLKYLDTDSICFH 147


>gi|170747286|ref|YP_001753546.1| ATP12 ATPase [Methylobacterium radiotolerans JCM 2831]
 gi|170653808|gb|ACB22863.1| ATP12 ATPase [Methylobacterium radiotolerans JCM 2831]
          Length = 263

 Score = 65.5 bits (158), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 5/128 (3%)

Query: 2   FVGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVL 61
           ++G+ +    P  + + +     AL  P+RFY +    E  G Y ++LD R   TP    
Sbjct: 8   WLGQPSDGEKPDPVRAARGHAKPAL--PRRFYDEAAFAEDQGGYRLTLDGRPANTPARNP 65

Query: 62  FKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDT 120
            ++ S  LA  +AAEW AQ   I  + M LT + NT ID    RL +  +  ++  +  T
Sbjct: 66  LRLPSRILAERVAAEWGAQDTAIDPARMPLTRLANTAIDGVTPRLAE--VAADLCAYAGT 123

Query: 121 DTILYHAN 128
           D + Y A 
Sbjct: 124 DLLAYRAG 131


>gi|83854942|ref|ZP_00948472.1| hypothetical protein NAS141_09441 [Sulfitobacter sp. NAS-14.1]
 gi|83842785|gb|EAP81952.1| hypothetical protein NAS141_09441 [Sulfitobacter sp. NAS-14.1]
          Length = 237

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+  ++E+ G Y + LD R +KTP      V +  +A  IAAEW AQ   I   
Sbjct: 5   KAKRFWKEAAVVEAEGGYTVELDGRGIKTPAKRALVVPTRAMAQKIAAEWQAQDGVINPD 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM  T   N  ID    L   ++   +  + D D + Y A+
Sbjct: 65  TMPATKTANAAIDKVA-LQHAEVADMLAAYGDCDLLCYRAD 104


>gi|83941465|ref|ZP_00953927.1| hypothetical protein EE36_04513 [Sulfitobacter sp. EE-36]
 gi|83847285|gb|EAP85160.1| hypothetical protein EE36_04513 [Sulfitobacter sp. EE-36]
          Length = 237

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+  ++E+ G Y + LD R +KTP      V +  +A  IAAEW AQ   I   
Sbjct: 5   KAKRFWKEAAVVEAEGGYTVELDGRGIKTPAKRALVVPTRAMAQKIAAEWQAQDGVINPD 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM  T   N  ID    L   ++   +  + D D + Y A+
Sbjct: 65  TMPATKTANAAIDKVA-LQHAEVADMLAAYGDCDLLCYRAD 104


>gi|390598435|gb|EIN07833.1| ATP12-domain-containing protein [Punctularia strigosozonata
           HHB-11173 SS5]
          Length = 284

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 7/102 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K VG+ E +G Y ++LD R L+TP G  +L     + +A  +A EWD Q   ++  
Sbjct: 52  KRFWKTVGVEEKDGTYAVTLDQRTLRTPGGNRLLLPKEKKLVAALVATEWDNQETLLKPH 111

Query: 88  TMHLTAICNTVID---NPNRLTKFDLVQNIINFLDTDTILYH 126
            + +T++ +  +D   +P   T+  +  +++ + +TDTI +H
Sbjct: 112 ALPMTSLASRAVDAFKDPE--TRKQVRSSLLKYFETDTICFH 151


>gi|320163158|gb|EFW40057.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 302

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)

Query: 30  KRFYKKVGI-----LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETI 84
           KRFY+ V +           + I LD R+L+TP   L  + ++ LA+ +A EWD+Q  TI
Sbjct: 61  KRFYRSVTVSAAPATAPAPGFVIKLDDRQLRTPARSLLVLPTKALAVGVAGEWDSQRPTI 120

Query: 85  QRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
           +   M LTA+ NT  D   +  +   V++++ FL TDT+
Sbjct: 121 KPHLMPLTALSNTATDPHRQRDRNQRVEDLLRFLATDTV 159


>gi|357384681|ref|YP_004899405.1| hypothetical protein [Pelagibacterium halotolerans B2]
 gi|351593318|gb|AEQ51655.1| hypothetical protein KKY_1639 [Pelagibacterium halotolerans B2]
          Length = 257

 Score = 65.5 bits (158), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           E PKRFYK V + E++G + + LD R  KTP G    V    LA  +  EWDAQ E I  
Sbjct: 26  ELPKRFYKSVDVAETDGVFTVLLDGRVTKTPTGKQVGVGHAELAARMREEWDAQGELIDP 85

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             M    + N+ ++     ++  L+  ++ +   D +LY A+
Sbjct: 86  DMMPHVKLINSAVEGGEE-SRGALLDEVVKYAGNDLLLYRAD 126


>gi|336367107|gb|EGN95452.1| hypothetical protein SERLA73DRAFT_186464 [Serpula lacrymans var.
           lacrymans S7.3]
 gi|336379828|gb|EGO20982.1| hypothetical protein SERLADRAFT_475515 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 289

 Score = 65.5 bits (158), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 3/102 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K VG+ + +  + ++LD R +KTP+G  +L   +   LA  IA EW+ Q   +Q  
Sbjct: 56  KRFWKHVGLEKRDNSFAVTLDKRAIKTPSGNTLLLPENKRLLATLIADEWENQERLLQPH 115

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
            + +T++ +  ID   +  T+ ++   ++ +LDTDTI +HA+
Sbjct: 116 ALPMTSLASRAIDAMGDDKTRSEVRAALLTYLDTDTICFHAD 157


>gi|403174914|ref|XP_003333814.2| hypothetical protein PGTG_15237 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375171374|gb|EFP89395.2| hypothetical protein PGTG_15237 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 302

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 3/102 (2%)

Query: 30  KRFYKKVGI-LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEWDAQHETIQR 86
           +RF+K V +  + +G Y I LD R LKTP+G    +    L LA  IA EWD Q + +++
Sbjct: 68  RRFWKTVDVHKQEDGQYSIRLDLRNLKTPSGKPLVLPKTKLVLATLIAREWDEQRKILKQ 127

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            ++ +T++ +  ID  +   +  +V +++ +LDTDTI +  +
Sbjct: 128 HSLPMTSLASRAIDGLSEAERDAVVDDLMRYLDTDTICFQES 169


>gi|163868587|ref|YP_001609796.1| hypothetical protein Btr_1445 [Bartonella tribocorum CIP 105476]
 gi|161018243|emb|CAK01801.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
          Length = 260

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 2/114 (1%)

Query: 16  NSIQSCK-YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIA 74
           +S+Q+ +  S    PKRFYK+V I    GD+ I LD R +KTP    F V +E  A  IA
Sbjct: 16  SSVQNTQNVSCQSHPKRFYKQVKIACEEGDFTILLDERPVKTPAKRPFLVPTEVFAEFIA 75

Query: 75  AEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            E+++Q   +  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 76  QEFESQKHVVDPTKMPMTRLVNTVIDGIADDMQV-VFEDLLRFVACDMIFYRAQ 128


>gi|398380032|ref|ZP_10538150.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           AP16]
 gi|397721348|gb|EJK81896.1| chaperone required for the assembly of F1-ATPase [Rhizobium sp.
           AP16]
          Length = 261

 Score = 65.1 bits (157), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK VGI E    + I LD + +KTP      V +E LA  +AAEW  Q E I  + 
Sbjct: 30  PKRFYKDVGIREGEDGHVIELDGKVVKTPARRSLAVPTEALAKLVAAEWARQVEIIDPTV 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D + Y A+
Sbjct: 90  MPVTRLVNTALDGVATDPQA-VFEDILRFSSSDLLCYRAD 128


>gi|222086087|ref|YP_002544619.1| hypothetical protein Arad_2518 [Agrobacterium radiobacter K84]
 gi|221723535|gb|ACM26691.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 261

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK VGI E    + I LD + +KTP      V +E LA  +AAEW  Q E I  + 
Sbjct: 30  PKRFYKDVGIREGEDGHVIELDGKVVKTPARRSLAVPTEALAKLVAAEWARQVEIIDPTV 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT +D      +  + ++I+ F  +D + Y A+
Sbjct: 90  MPVTRLVNTALDGVATDPQA-VFEDILRFSSSDLLCYRAD 128


>gi|405123249|gb|AFR98014.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Cryptococcus neoformans var. grubii H99]
          Length = 292

 Score = 65.1 bits (157), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 4/100 (4%)

Query: 30  KRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQHETIQR 86
           +RF+K V I  +  D Y I+LDHR LKTP G   ++  E   LA  IA EW+ Q E +++
Sbjct: 59  RRFWKTVNISATPSDGYLITLDHRALKTPFGAKLEIPKERRLLAALIANEWENQDEVLKQ 118

Query: 87  STMHLTAICNTVIDNPNR-LTKFDLVQNIINFLDTDTILY 125
             + +T++ +  ID  +   T+  ++  ++ +L+TDTILY
Sbjct: 119 HALPVTSLASRAIDGLSEGPTRPAVIDALLKYLETDTILY 158


>gi|357976559|ref|ZP_09140530.1| ATP12 ATPase [Sphingomonas sp. KC8]
          Length = 233

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V  +     + I LD R +KTP      + ++ LA A+ AEW +Q +TI   +M
Sbjct: 2   KRFYKNVAAVAGPDGFAIELDGRPVKTPARAALLLPTQALADAVVAEWQSQEDTIDPRSM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + N  ID   P+ L KF   Q+I  + ++D   Y A+
Sbjct: 62  PLTGLANAAIDRVAPDPL-KF--AQDIAVYGESDVTCYRAD 99


>gi|299135223|ref|ZP_07028414.1| ATP12 ATPase [Afipia sp. 1NLS2]
 gi|298590200|gb|EFI50404.1| ATP12 ATPase [Afipia sp. 1NLS2]
          Length = 258

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+  G+ E+   + ++LD ++++TP           LA A+AAEW AQ ++I   +M
Sbjct: 30  KRFYESAGVAETPEGFAVTLDGKQVRTPGKRFLSAPVRELAEAMAAEWGAQTDSIDPLSM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLV---QNIINFLDTDTILYHANF 129
            +T + N+ ID        D+     +I  + DTD + Y A+F
Sbjct: 90  PVTRLANSTIDG----VADDVAAVRDDIAKYFDTDLLFYRASF 128


>gi|452825747|gb|EME32742.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Galdieria
           sulphuraria]
          Length = 311

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 8/105 (7%)

Query: 29  PKRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFY++V  +E   G Y +SLD + L+T  G   +     L+L +A+EW+AQH  I  S
Sbjct: 70  PKRFYEQVYTVERIPGVYCVSLDGKLLRTRTGKFLESRCRELSLVVASEWEAQHSRILPS 129

Query: 88  TMHLTAICNTVIDNPNRLTKF---DLVQNIINFLDTDTILYHANF 129
           +M +T++  T ID    LTK      ++ +  F +TDTI   A++
Sbjct: 130 SMPVTSLLTTSID----LTKEHRQQFLKTLSEFFNTDTICIRASY 170


>gi|408380454|ref|ZP_11178038.1| hypothetical protein QWE_22706 [Agrobacterium albertimagni AOL15]
 gi|407745667|gb|EKF57199.1| hypothetical protein QWE_22706 [Agrobacterium albertimagni AOL15]
          Length = 268

 Score = 64.7 bits (156), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY+ VGI   +  + I+LD + +KTP+  L  + +   A  + AEW  Q E I  +T
Sbjct: 35  PKRFYESVGIETRDDGFSITLDGKPVKTPSKNLLTLPNREAADLVVAEWAGQGEFIDPAT 94

Query: 89  MHLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
           M +T + NT ID  +     D V   I+ F  TD + Y A+
Sbjct: 95  MPITKLVNTAIDAVS--NSLDAVFDEIVRFAGTDLLCYRAD 133


>gi|90417734|ref|ZP_01225646.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90337406|gb|EAS51057.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 240

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 9/106 (8%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           E PKRFY +V +  ++  + + LD R +KTP      V  +  A  +AAEW AQ E I  
Sbjct: 9   ELPKRFYSEVTLAPTDDGFAVLLDGRPVKTPGRRPLAVPMQRAAEVVAAEWGAQRERIDP 68

Query: 87  STMHLTAICNTVI----DNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +TM +T + NTV+    D+P       +  ++  +++TD + Y A 
Sbjct: 69  ATMPMTRLVNTVVEAIADDP-----IPVRDDLARYIETDLLFYRAG 109


>gi|374332187|ref|YP_005082371.1| ATPase [Pseudovibrio sp. FO-BEG1]
 gi|359344975|gb|AEV38349.1| ATPase [Pseudovibrio sp. FO-BEG1]
          Length = 264

 Score = 64.3 bits (155), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 8/118 (6%)

Query: 15  INSIQSCK-YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTP--NGVLFKVSSEPLAL 71
           ++++Q+ + ++    PKRFY++V +   +  Y + LD R +KTP  N ++FK   E +A 
Sbjct: 17  VDAVQAAREHTKRNLPKRFYERVSVELKDDVYAVLLDGRSIKTPGRNALVFK--DEVIAE 74

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKF-DLVQNIINFLDTDTILYHAN 128
            +AAEW+ Q E I   TM LT I ++ ID      KF D+   I  +   D + Y A+
Sbjct: 75  GVAAEWELQEEEIDPGTMPLTRIAHSAIDAVEE--KFADVADEITRYAGNDHLCYRAD 130


>gi|159042873|ref|YP_001531667.1| ATP12 chaperone protein [Dinoroseobacter shibae DFL 12]
 gi|157910633|gb|ABV92066.1| ATP12 chaperone protein [Dinoroseobacter shibae DFL 12]
          Length = 234

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+  I+E+   +E+ LD R ++TP   L  V S   A  IAAEWDAQ ET+   +M
Sbjct: 7   KRFWKETDIVEAGTGFEVRLDGRSVRTPLKTLLVVPSRGFAERIAAEWDAQDETVNPQSM 66

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
             T   N  +D   P      ++ + +  +  TD + Y A 
Sbjct: 67  PFTRAANAALDKVTPQHA---EVAEMLSAYGGTDLLCYRAT 104


>gi|452821510|gb|EME28539.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Galdieria
           sulphuraria]
          Length = 518

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 8/105 (7%)

Query: 29  PKRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFY++V  +E   G Y +SLD + L+T  G   +     L+L +A+EW+AQH  I  S
Sbjct: 277 PKRFYEQVYTVERIPGVYCVSLDGKLLRTRTGKFLESRCRELSLVVASEWEAQHSRILPS 336

Query: 88  TMHLTAICNTVIDNPNRLTKF---DLVQNIINFLDTDTILYHANF 129
           +M +T++  T ID    LTK      ++ +  F +TDTI   A++
Sbjct: 337 SMPVTSLLTTSID----LTKEHRQQFLKTLSEFFNTDTICIRASY 377


>gi|300023020|ref|YP_003755631.1| ATP12 ATPase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524841|gb|ADJ23310.1| ATP12 ATPase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 271

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 10/109 (9%)

Query: 25  ALEKP--KRFYKKVGILESNGD---YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           +L KP  +RFYK+     S GD   ++I LD R +KTP      V ++ LALAIA EW A
Sbjct: 36  SLAKPLARRFYKEA----STGDVAPFQILLDGRAVKTPKKRALAVPTKALALAIADEWQA 91

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           Q +TI  S M LT   NT ID  +  T   +  +I+ +  +D + Y A 
Sbjct: 92  QVDTIDPSRMPLTRFANTAIDAVSE-TLDAVAADIVAYAGSDLVCYRAE 139


>gi|414174040|ref|ZP_11428667.1| hypothetical protein HMPREF9695_02313 [Afipia broomeae ATCC 49717]
 gi|410890674|gb|EKS38473.1| hypothetical protein HMPREF9695_02313 [Afipia broomeae ATCC 49717]
          Length = 256

 Score = 64.3 bits (155), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY   G+ E    + ++LD + ++TP        +  LA  +AAEWDAQ + I   +M
Sbjct: 30  KRFYTSAGVAEGPDGFTVTLDGKPIRTPGRNPLAAPTRELAEVMAAEWDAQTDNIDPMSM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
            LT + N+VID   +  +  +  +   + +TD + Y A F
Sbjct: 90  PLTRLANSVIDGVVKDVQT-VADDAAKYFETDLLFYRAGF 128


>gi|395793299|ref|ZP_10472704.1| hypothetical protein MEI_01325 [Bartonella vinsonii subsp.
           arupensis Pm136co]
 gi|395431613|gb|EJF97631.1| hypothetical protein MEI_01325 [Bartonella vinsonii subsp.
           arupensis Pm136co]
          Length = 260

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           K S    PKRFYK+V  L   G + I LD   +KTP   LF V +E  ++ +A E+++Q 
Sbjct: 23  KLSCSPLPKRFYKEVRTLREEGGFSILLDGCPVKTPAKRLFIVPTEAFSVLVAEEFESQK 82

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           + I  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 83  QVIDPAKMPITRLVNTVIDGIADDMQ-SVFEDLLRFVACDMIFYRAQ 128


>gi|319899066|ref|YP_004159159.1| ATP12 chaperone family protein [Bartonella clarridgeiae 73]
 gi|319403030|emb|CBI76585.1| ATP12 chaperone family protein [Bartonella clarridgeiae 73]
          Length = 264

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 6/121 (4%)

Query: 8   TMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSE 67
           ++ YP       S K S    PKRFY+KV ++     + I LD R+LKTP    F V  E
Sbjct: 17  SLPYPH-----HSQKLSCQSLPKRFYEKVDVICKEEKFSILLDGRQLKTPAKRDFFVPIE 71

Query: 68  PLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            LA+ +  E+ AQ E I  + M +T + NTVID      +  + ++++ F+  D I Y A
Sbjct: 72  KLAVLVVREFTAQEEVIDPAKMPITRLVNTVIDGIIDNMQI-IFEDLLRFVACDMIFYRA 130

Query: 128 N 128
            
Sbjct: 131 Q 131


>gi|433775464|ref|YP_007305931.1| chaperone required for the assembly of F1-ATPase [Mesorhizobium
           australicum WSM2073]
 gi|433667479|gb|AGB46555.1| chaperone required for the assembly of F1-ATPase [Mesorhizobium
           australicum WSM2073]
          Length = 263

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK+V +  + G + + LD + ++TP   +  + +E  A  +A E+  Q ETI   T
Sbjct: 32  PKRFYKEVSVASAEGGFAVHLDGKPVRTPGKAMLALPTEAAATLVAGEFAEQGETINPMT 91

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +  + NT ID      +  ++++I+ F  +D + Y A+
Sbjct: 92  MPVMRLVNTAIDGVASDPQA-VLEDILRFASSDLLCYRAD 130


>gi|170094050|ref|XP_001878246.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646700|gb|EDR10945.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 283

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 3/103 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+  VG+        I+LD R LKTP+G  +L   +   LA  IAAEWD Q   ++  
Sbjct: 51  KRFWSTVGVSTQGDTLAITLDGRALKTPSGNTLLLPANKTLLASVIAAEWDNQETLLKPH 110

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHANF 129
            + +T+I +  +D   +  T+ ++ + ++ +LDTDTI +  N+
Sbjct: 111 ALPMTSIASRAVDELEHESTRQEVRKALVAYLDTDTICFFNNY 153


>gi|353237289|emb|CCA69265.1| related to ATP12-F1F0-ATPase complex assembly protein
           [Piriformospora indica DSM 11827]
          Length = 281

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWDAQHETIQRS 87
           KRF+    + + +   E++LD R LKTP G   +V  S + LA  IA EWD Q   ++  
Sbjct: 49  KRFWNAAHVRQGDDYIEVTLDGRALKTPGGNKLRVPASKKVLATLIANEWDVQDTILKAH 108

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            + LT+I +  ID       +  + +N++ + DTDTI YH
Sbjct: 109 ALPLTSIASRAIDGLSTAEERLAVTENLLKYFDTDTICYH 148


>gi|414162183|ref|ZP_11418430.1| hypothetical protein HMPREF9697_00331 [Afipia felis ATCC 53690]
 gi|410879963|gb|EKS27803.1| hypothetical protein HMPREF9697_00331 [Afipia felis ATCC 53690]
          Length = 258

 Score = 63.9 bits (154), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+  G+ E+   + ++LD + ++TP           LA A+A EW AQ E I   +M
Sbjct: 30  KRFYESAGVAETPEGFAVTLDGKPVRTPGKRFLGAPVRELAEAMATEWGAQAEMIDPLSM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLV---QNIINFLDTDTILYHANF 129
            +T + N+ +D        D+V    +I  + DTD + Y A+F
Sbjct: 90  PMTRLANSTVDG----VADDVVAVRDDIAKYFDTDLLFYRASF 128


>gi|319408732|emb|CBI82389.1| ATP12 chaperone family protein [Bartonella schoenbuchensis R1]
          Length = 260

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           K S    PKRFYK+V I    G + I LD   +KTP      +S+E LA  +A E+  Q 
Sbjct: 23  KLSCQPLPKRFYKEVSIAHEEGGFSILLDGTPVKTPARRCLLMSTEALAALVAQEFTVQE 82

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           E+I    M +T + NTV+D      +  + ++++ F+  D I Y A 
Sbjct: 83  ESIDPGKMPITRLVNTVVDGIADNMQI-IFEDLLRFVACDMIFYRAQ 128


>gi|84515666|ref|ZP_01003027.1| hypothetical protein SKA53_13491 [Loktanella vestfoldensis SKA53]
 gi|84510108|gb|EAQ06564.1| hypothetical protein SKA53_13491 [Loktanella vestfoldensis SKA53]
          Length = 241

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KPKRF+K       +G + ++LD R +KTP      V + PLA A+A EWDAQ   +   
Sbjct: 5   KPKRFWKAATPQACDGGFTVTLDGRPVKTPAKAALIVPTLPLAEAVAQEWDAQTGLVDPR 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           TM +T   N  ID   R  + +++  +  +  +D + Y A
Sbjct: 65  TMPVTRSANAAIDK-VRTQRAEVIGLLSEYGGSDLLCYRA 103


>gi|239831989|ref|ZP_04680318.1| ATP12 ATPase [Ochrobactrum intermedium LMG 3301]
 gi|444308585|ref|ZP_21144230.1| ATP12 ATPase [Ochrobactrum intermedium M86]
 gi|239824256|gb|EEQ95824.1| ATP12 ATPase [Ochrobactrum intermedium LMG 3301]
 gi|443488168|gb|ELT50925.1| ATP12 ATPase [Ochrobactrum intermedium M86]
          Length = 260

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + E  G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMLAQLPKRFYEKAEVAEVEGGFAVHLDGRPVKTPARSLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
           ++ ++  A+ +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  RLPTKAAAVIVADEFAAQEKVIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|321253658|ref|XP_003192808.1| hypothetical protein CGB_C4510W [Cryptococcus gattii WM276]
 gi|317459277|gb|ADV21021.1| hypothetical protein CNC03060 [Cryptococcus gattii WM276]
          Length = 292

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 4/100 (4%)

Query: 30  KRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQHETIQR 86
           +RF+K V I  +  D + I+LDHR LKTP G   ++  E   LA  IA EW+ Q E +++
Sbjct: 59  RRFWKTVNISSTPSDGFLINLDHRALKTPFGAKLEIPKERRLLAALIANEWENQDEVLKQ 118

Query: 87  STMHLTAICNTVIDNPNR-LTKFDLVQNIINFLDTDTILY 125
             + +T++ +  ID  +   T+  +++ ++ +L+TDTILY
Sbjct: 119 HALPVTSLASRAIDGLSEGPTRPAVIEALLKYLETDTILY 158


>gi|149187027|ref|ZP_01865334.1| ATP12 ATPase [Erythrobacter sp. SD-21]
 gi|148829316|gb|EDL47760.1| ATP12 ATPase [Erythrobacter sp. SD-21]
          Length = 238

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 26  LEKP---KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           +E+P   KRFYK V   +++  + +SLD R +KT  G    V SE LA  +AAEW  Q E
Sbjct: 1   MEQPRAMKRFYKDVSTAKTDLGWTVSLDGRPIKTQGGQPQVVPSEALAEKLAAEWSGQGE 60

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TI  +      + +  +D   R  +  LV+ ++ + +TDT+ + A+
Sbjct: 61  TIDPAAFRFRDMTDYALDVVAR-DRDSLVEKLLGYAETDTLCFRAD 105


>gi|407800532|ref|ZP_11147392.1| hypothetical protein OCGS_2465 [Oceaniovalibus guishaninsula
           JLT2003]
 gi|407057451|gb|EKE43427.1| hypothetical protein OCGS_2465 [Oceaniovalibus guishaninsula
           JLT2003]
          Length = 235

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRF+    I+ +   + + LD R L+TP G    + ++ LA  +A EWDAQ E +   T
Sbjct: 6   PKRFWTAARIVRTEDGHAVFLDDRPLRTPAGAPLALPADTLARMVAEEWDAQTERVDPLT 65

Query: 89  MHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T   N+ ID   P R     +V  ++ +  TD + Y A+
Sbjct: 66  MPATRSANSAIDKVTPQRAA---VVAALLEYGATDLLCYRAD 104


>gi|126736637|ref|ZP_01752377.1| ATP12 ATPase [Roseobacter sp. CCS2]
 gi|126713950|gb|EBA10821.1| ATP12 ATPase [Roseobacter sp. CCS2]
          Length = 236

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           +PKRF+K+       G + + LD R ++TP      V +  +A AIA EWDAQ E I   
Sbjct: 5   QPKRFWKQAQAEVCEGGFTVKLDGRLVRTPAKAALTVPTLAMADAIATEWDAQEELIDPR 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           TM +T   N  ID   R  + +++  +  + D+D + Y A
Sbjct: 65  TMPVTRGANAAIDK-VRTQRSEVIALLAEYGDSDLLCYRA 103


>gi|260432479|ref|ZP_05786450.1| ATP12 ATPase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416307|gb|EEX09566.1| ATP12 ATPase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 235

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 1/102 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KPKRF+ +  ++  +  Y + LD R++KTP      V +  +A A+  EWDAQ + +  +
Sbjct: 5   KPKRFWTESAVVAVDDGYTVELDGRRVKTPAKAALVVPTRAMAEAVGREWDAQEKEVDPA 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
           TM  T   N  ID   R    ++   + ++ D++ + Y A +
Sbjct: 65  TMPFTRSANAAIDK-VRHQHAEVADMLADYGDSELLCYRATY 105


>gi|254486708|ref|ZP_05099913.1| ATP12 ATPase [Roseobacter sp. GAI101]
 gi|214043577|gb|EEB84215.1| ATP12 ATPase [Roseobacter sp. GAI101]
          Length = 239

 Score = 63.5 bits (153), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+    ++ + G Y + LD R LKTP      V +E +A A+AAEW AQ  TI   
Sbjct: 5   KAKRFWTTAQVVAAEGGYAVELDGRPLKTPAKRSLIVPTEQMAQAVAAEWQAQEGTIDPR 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM  T   N  +D    +   ++   +  + D D + Y A+
Sbjct: 65  TMPCTKTANAALDK-VAIQHAEVADMLAAYGDCDLLCYRAD 104


>gi|149913098|ref|ZP_01901632.1| hypothetical protein RAZWK3B_03880 [Roseobacter sp. AzwK-3b]
 gi|149813504|gb|EDM73330.1| hypothetical protein RAZWK3B_03880 [Roseobacter sp. AzwK-3b]
          Length = 243

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K   +   +  + + LD R +KTP      V ++ +A AIAAEWDAQ + I   
Sbjct: 5   KAKRFWKTAEVDARDDGFAVRLDGRPVKTPAKAPLVVPTQDMARAIAAEWDAQEDVINPH 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           +M +T   N  ID   R    ++ Q + ++ D D + Y A
Sbjct: 65  SMPVTRAANAAIDK-VRHQHSEVAQMLADYGDADLLCYRA 103


>gi|384921228|ref|ZP_10021216.1| ATP12 ATPase [Citreicella sp. 357]
 gi|384464862|gb|EIE49419.1| ATP12 ATPase [Citreicella sp. 357]
          Length = 237

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           P+RFY++    E++  Y I+LD  ++ TP      V S  LA AIAAEW AQ E I   +
Sbjct: 6   PRRFYEQATPTETSSGYGIALDGHRVMTPGKSALVVPSRALAEAIAAEWQAQGEKIDPGS 65

Query: 89  MHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHA 127
           M  T   N+ I+   P    K  + Q + ++ D+D + Y A
Sbjct: 66  MPFTRTANSAIEKVAPQ---KDAVAQMLADYGDSDLLCYRA 103


>gi|94498528|ref|ZP_01305084.1| hypothetical protein SKA58_04516 [Sphingomonas sp. SKA58]
 gi|94422071|gb|EAT07116.1| hypothetical protein SKA58_04516 [Sphingomonas sp. SKA58]
          Length = 231

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V I+  +  + I LD R ++TP   L  + +  LA A+AAEW AQ   I  + M
Sbjct: 2   KRFYKDVAIVAGSEGFAIELDGRAVRTPARALLALPTRNLAEAVAAEWRAQEGEINPAAM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N  ID+  PN          I  +  +D + Y A+
Sbjct: 62  IFTGLSNAAIDHIAPN---PGAFAAGIARYAQSDLLCYRAD 99


>gi|145354504|ref|XP_001421523.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581760|gb|ABO99816.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 245

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 31  RFYKKVGILESN---GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           RFY++V   E +   G + + LD R L+TP    +  ++E LA A+AAEWDAQ E I   
Sbjct: 9   RFYERVDARERDARDGTWRVELDARALRTPKRNEYAFATEGLARAVAAEWDAQGERIAPF 68

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTD 121
           TM LT++  T ID+  +  T+   V+ ++ +  TD
Sbjct: 69  TMPLTSLSATAIDHMGDAETRRVHVETLLKYFGTD 103


>gi|451942150|ref|YP_007462787.1| hypothetical protein BVwin_08940 [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
 gi|451901537|gb|AGF75999.1| hypothetical protein BVwin_08940 [Bartonella vinsonii subsp.
           berkhoffii str. Winnie]
          Length = 260

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 15  INSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIA 74
           +  IQ    S L  PKRFYK+V +L     + + LD   +KTP    F V +E  A+ +A
Sbjct: 18  VEKIQKLSCSPL--PKRFYKEVKVLCEERGFSVLLDGCPVKTPAKRFFIVPTEAFAMLVA 75

Query: 75  AEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            E+++Q + I  + M +T + NTVID      +  + ++++ F+ +D I Y A 
Sbjct: 76  EEFESQKQVIDPAKMPITRLVNTVIDGIADDMQ-SVFEDLLRFVASDMIFYRAQ 128


>gi|328863873|gb|EGG12972.1| hypothetical protein MELLADRAFT_32252 [Melampsora larici-populina
           98AG31]
          Length = 259

 Score = 63.2 bits (152), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 61/99 (61%), Gaps = 3/99 (3%)

Query: 30  KRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAI--AAEWDAQHETIQR 86
           +RF+K V I  S +G++ I LD RKL TP+G    +    +ALA+  A EW  Q + +++
Sbjct: 28  QRFWKTVDIHPSEDGNFHIRLDQRKLVTPSGNQLVIPRSKIALAVLVAREWAEQRKILKQ 87

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            ++ LT++ +  ID      + +++ +++N+LDTDT+ +
Sbjct: 88  HSLPLTSLVSRSIDGMKVEDRDEIIDSLLNYLDTDTVCF 126


>gi|304319747|ref|YP_003853390.1| hypothetical protein PB2503_00842 [Parvularcula bermudensis
           HTCC2503]
 gi|303298650|gb|ADM08249.1| hypothetical protein PB2503_00842 [Parvularcula bermudensis
           HTCC2503]
          Length = 234

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY+ V +   +G Y I LD R  KTP   L    S+ LA A+AAEW  Q + I  +T
Sbjct: 6   PKRFYETVTVAAEDGVYVIKLDGRPAKTPGRHLLGAESQILAEALAAEWSQQQDIIDLTT 65

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           M LT +     D      +    Q I+ +  +D + Y A
Sbjct: 66  MPLTRLTGFARDG-GEDARGPWRQTILAYAGSDLLCYRA 103


>gi|110678760|ref|YP_681767.1| ATP12 chaperone protein [Roseobacter denitrificans OCh 114]
 gi|109454876|gb|ABG31081.1| ATP12 chaperone protein, putative [Roseobacter denitrificans OCh
           114]
          Length = 236

 Score = 63.2 bits (152), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 1/102 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+  I E+   + I+LD R +KTP        + P A  IAAEW+AQ E I  +
Sbjct: 5   KAKRFWKEAVIDETAEGFGIALDGRAVKTPAKRALIAPTRPFAEKIAAEWNAQGEQIDPA 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
           TM  T   N  +D    + K ++   +  + D+D + Y A +
Sbjct: 65  TMPFTRSANAALDK-VAVQKQEVADMLAAYGDSDLLCYRAEY 105


>gi|265984070|ref|ZP_06096805.1| ATP12 ATPase [Brucella sp. 83/13]
 gi|306838363|ref|ZP_07471208.1| ATP12 ATPase [Brucella sp. NF 2653]
 gi|264662662|gb|EEZ32923.1| ATP12 ATPase [Brucella sp. 83/13]
 gi|306406503|gb|EFM62737.1| ATP12 ATPase [Brucella sp. NF 2653]
          Length = 260

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ + + P     +++ K    + PKRFY+K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDKNP----IVRAQKQMQAQLPKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKVIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|423713070|ref|ZP_17687330.1| hypothetical protein ME1_00076 [Bartonella vinsonii subsp.
           arupensis OK-94-513]
 gi|395424696|gb|EJF90876.1| hypothetical protein ME1_00076 [Bartonella vinsonii subsp.
           arupensis OK-94-513]
          Length = 260

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           K S    PKRFYK+V  L   G + I LD   +KTP    F V +E  ++ +A E+++Q 
Sbjct: 23  KLSCSPLPKRFYKEVRTLREEGGFSILLDGCPVKTPAKRFFIVPTEAFSVLVAEEFESQK 82

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           + I  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 83  QVIDPAKMPITRLVNTVIDGIADDMQ-SVFEDLLRFVACDMIFYRAQ 128


>gi|114766873|ref|ZP_01445795.1| hypothetical protein 1100011001282_R2601_09532 [Pelagibaca
           bermudensis HTCC2601]
 gi|114540919|gb|EAU43979.1| hypothetical protein R2601_09532 [Roseovarius sp. HTCC2601]
          Length = 237

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           P+RFY+     +  G + I+LD R++ TP      V +  LA AIA EW AQ E I  +T
Sbjct: 6   PRRFYETATATQVEGGHGIALDGRRVMTPGKSPLVVPTRGLAEAIAEEWQAQGEKIDPNT 65

Query: 89  MHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T   N+ I+   P R    D+   + ++ D+D + Y A+
Sbjct: 66  MPFTRTANSAIEKVTPQRAAVADM---LADYGDSDLLCYRAD 104


>gi|86135802|ref|ZP_01054381.1| hypothetical protein MED193_16804 [Roseobacter sp. MED193]
 gi|85826676|gb|EAQ46872.1| hypothetical protein MED193_16804 [Roseobacter sp. MED193]
          Length = 234

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+   +E  G + + LD R LKTP      + S  +A AIA EWDAQ E I   
Sbjct: 5   KQKRFWKEAKAVEVEGGFSVHLDGRGLKTPAKTSLILPSRAMAEAIAKEWDAQVEGINPQ 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM  T   N  ID        ++   + ++ D+D + Y A 
Sbjct: 65  TMPYTRSANAAIDKVAN-QHGEVADMLADYGDSDLLCYRAE 104


>gi|440226752|ref|YP_007333843.1| ATP12 ATPase [Rhizobium tropici CIAT 899]
 gi|440038263|gb|AGB71297.1| ATP12 ATPase [Rhizobium tropici CIAT 899]
          Length = 261

 Score = 62.8 bits (151), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V I    G + I+LD + +KTP      + +E LA  +AAEW  Q + I  ++
Sbjct: 30  PKRFYKDVTISADEGGHAIALDGKVVKTPARHSLALPTEALARLVAAEWARQVDVIDPAS 89

Query: 89  MHLTAICNTVIDNPNRLTK--FDLVQNIINFLDTDTILYHAN 128
           M +T + NT ID     ++  FD    I+ F  +D + Y A+
Sbjct: 90  MPVTRLVNTAIDGVATESQAVFD---EIVRFSGSDLLCYRAD 128


>gi|399067136|ref|ZP_10748779.1| chaperone required for the assembly of F1-ATPase [Novosphingobium
           sp. AP12]
 gi|398027295|gb|EJL20851.1| chaperone required for the assembly of F1-ATPase [Novosphingobium
           sp. AP12]
          Length = 230

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+ G  +  G +   LD R ++T  G    V ++ LA  +AAEW  Q E I  ++ 
Sbjct: 2   KRFYKETGTEQVEGGWRAVLDGRAIRTAGGRQQVVPTQALASTLAAEWAVQGEIIDPASF 61

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           H   + +  ID   P+R T   ++  ++ + +TDT+ Y A+
Sbjct: 62  HFRDLADFAIDAIAPDRHT---VIAELVPYAETDTLCYRAD 99


>gi|255261488|ref|ZP_05340830.1| ATP12 ATPase [Thalassiobium sp. R2A62]
 gi|255103823|gb|EET46497.1| ATP12 ATPase [Thalassiobium sp. R2A62]
          Length = 241

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+      +  G + +SLD R LKTP      V +  +A AIAAEW+AQ E I  S
Sbjct: 5   KQKRFWDTAVAKQVEGGWGVSLDSRALKTPVKSALVVPTAQVAEAIAAEWNAQGENIDPS 64

Query: 88  TMHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM  T   N+ ID   P +    D+   +  +  TD + Y A+
Sbjct: 65  TMPFTKTSNSAIDKVTPQQAEVADM---LAEYGGTDLLCYRAD 104


>gi|27380475|ref|NP_772004.1| hypothetical protein bll5364 [Bradyrhizobium japonicum USDA 110]
 gi|27353639|dbj|BAC50629.1| bll5364 [Bradyrhizobium japonicum USDA 110]
          Length = 264

 Score = 62.8 bits (151), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 71/121 (58%), Gaps = 9/121 (7%)

Query: 10  RYPRLINSIQSCKYSA-LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEP 68
           R PR     +S + SA   + KRFYK+ G+ E+ G + I+LD R ++TP+G    + S  
Sbjct: 14  RDPR-----ESARQSARTPQRKRFYKEAGVAEAEGGFAITLDGRPIRTPSGRQVVIPSRA 68

Query: 69  LALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQ-NIINFLDTDTILYHA 127
           LA A+AAEW AQ ETI   TM LT I N+V++    + + +LV  ++  + ++D + Y A
Sbjct: 69  LADAVAAEWAAQGETIDPVTMPLTRIANSVVE--GVVDRVELVSDDLAKYFESDLLFYRA 126

Query: 128 N 128
            
Sbjct: 127 G 127


>gi|390169268|ref|ZP_10221209.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium indicum B90A]
 gi|389588131|gb|EIM66185.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium indicum B90A]
          Length = 231

 Score = 62.4 bits (150), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+   ++     +EI LD R ++TP      + ++ LA AIA EW AQ ET+   +M
Sbjct: 2   KRFYEDAAVVAGESGFEIRLDGRPVRTPARAPLALPTQGLAEAIAEEWRAQGETVDPRSM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N  ID   P+  +       I  + ++D + Y A 
Sbjct: 62  PFTGLANGAIDQIAPHSGS---FAAGIARYAESDLLCYRAE 99


>gi|254461156|ref|ZP_05074572.1| ATP12 ATPase [Rhodobacterales bacterium HTCC2083]
 gi|206677745|gb|EDZ42232.1| ATP12 ATPase [Rhodobacteraceae bacterium HTCC2083]
          Length = 236

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF++    +E  G + + LD R +KTP      V +  +A A+A EWDAQ E +   
Sbjct: 5   KMKRFWEVAAAVEVEGGFTVHLDGRAIKTPGKAHLIVPTLVMAEAMALEWDAQVEGVNPE 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIIN-FLDTDTILYHAN 128
           TM +T   N+ +D      +FD+V +++  +  TD + Y A+
Sbjct: 65  TMPVTKSANSAVDKVT--PQFDVVADMLGEYAGTDLLCYRAS 104


>gi|329889171|ref|ZP_08267514.1| ATP12 chaperone family protein [Brevundimonas diminuta ATCC 11568]
 gi|328844472|gb|EGF94036.1| ATP12 chaperone family protein [Brevundimonas diminuta ATCC 11568]
          Length = 253

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           E+ KRF+K  G+   +G + + LD R  KTP G    + +E  A  +A EW AQ E +  
Sbjct: 22  ERIKRFWKSAGVEARDGGWIVLLDGRAPKTPAGNAIVLPTEAAARLVADEWSAQGEHMTP 81

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +TM  T + +T ID  ++ T+  + + I  +  +D + Y A 
Sbjct: 82  ATMPATRLASTAIDRVSQ-TRGPVAEEIARYAGSDVLCYLAE 122


>gi|146278538|ref|YP_001168697.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17025]
 gi|145556779|gb|ABP71392.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17025]
          Length = 235

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K V + E  G + + LD R L+TP      + + PLA A+A EW AQ   ++  TM
Sbjct: 7   KRFWKGVSVAEDAGGFAVLLDGRALRTPAKRPLILPTGPLAEAVADEWRAQEGEVRPGTM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHA 127
             T   N+ +D      +FD V  ++  +  TD + Y A
Sbjct: 67  PFTRSANSALDKVE--PQFDEVAGMLAAYGGTDLLCYRA 103


>gi|294011529|ref|YP_003544989.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium japonicum UT26S]
 gi|292674859|dbj|BAI96377.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium japonicum UT26S]
          Length = 231

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+   ++     +EI LD R ++TP      + ++ LA AIA EW AQ ET+   +M
Sbjct: 2   KRFYEDAAVVAGESGFEIRLDGRPVRTPARAALALPTQGLAEAIAEEWRAQGETVDPRSM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N  ID   P+  +       I  + ++D + Y A 
Sbjct: 62  PFTGLANGAIDQIAPHSGS---FAAGISRYAESDLLCYRAE 99


>gi|110633999|ref|YP_674207.1| ATP12 ATPase [Chelativorans sp. BNC1]
 gi|110284983|gb|ABG63042.1| ATP12 ATPase [Chelativorans sp. BNC1]
          Length = 262

 Score = 62.4 bits (150), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY++V +      +++ LD R ++TP GV   + +E  A  IA E+ AQ E I   +
Sbjct: 32  PKRFYERVEVSGEGNAWKVLLDGRAVRTPAGVELVLPNEAAASLIAGEFAAQGEQIDPMS 91

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT ID      +  ++++I+ F  TD + Y A+
Sbjct: 92  MPVTRLVNTAIDGVAADVQA-VMEDILRFASTDLLYYRAD 130


>gi|451940781|ref|YP_007461419.1| hypothetical protein BAnh1_07520 [Bartonella australis Aust/NH1]
 gi|451900168|gb|AGF74631.1| hypothetical protein BAnh1_07520 [Bartonella australis Aust/NH1]
          Length = 260

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 1/110 (0%)

Query: 19  QSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD 78
           ++ ++S    PKRFYKKV      G+Y I LD   +KTP      V  E LA  +  E+D
Sbjct: 20  KAQEFSRQSLPKRFYKKVDARYERGNYFILLDGSPVKTPARRCLFVPKETLAALVVQEFD 79

Query: 79  AQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            Q E I    M +T + NTVID      +  + ++++ F+  D ILY A 
Sbjct: 80  IQEEVIDPVKMPITRLVNTVIDGVADDMQ-AIFEDLLRFVACDMILYRAQ 128


>gi|89070523|ref|ZP_01157812.1| hypothetical protein OG2516_08316 [Oceanicola granulosus HTCC2516]
 gi|89043830|gb|EAR50028.1| hypothetical protein OG2516_08316 [Oceanicola granulosus HTCC2516]
          Length = 236

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+    + E    + ++LD R ++TP      + +  LA  +AAEWDAQ E I   
Sbjct: 5   KAKRFWTAAHVAERGDGFAVTLDDRPVRTPAKAPLTLPTRALAEGVAAEWDAQQEQIDPL 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
           +M LT   N  +D      +FD V  ++ ++  TD + Y A+
Sbjct: 65  SMPLTRAANAALDKVA--PQFDEVAAMVADYGGTDLLCYRAD 104


>gi|306843877|ref|ZP_07476472.1| ATP12 ATPase [Brucella inopinata BO1]
 gi|306275632|gb|EFM57356.1| ATP12 ATPase [Brucella inopinata BO1]
          Length = 260

 Score = 62.0 bits (149), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMQAQLPKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKVIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|381203580|ref|ZP_09910686.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium yanoikuyae XLDN2-5]
          Length = 231

 Score = 62.0 bits (149), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V +    G + I LD R ++TP      + +  LA A+A EW  Q ET+  +TM
Sbjct: 2   KRFYKDVTVEPVEGGFAIRLDGRPVRTPARAELALPNAVLAEAVAQEWRDQGETVDPATM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N  ID+   NR  KF    +I  +  TD + Y A 
Sbjct: 62  AFTGLANAAIDHIAGNR-AKF--AADIAEYGGTDMLCYRAE 99


>gi|310816977|ref|YP_003964941.1| ATP12 chaperone protein [Ketogulonicigenium vulgare Y25]
 gi|385234563|ref|YP_005795905.1| ATP12 ATPase [Ketogulonicigenium vulgare WSH-001]
 gi|308755712|gb|ADO43641.1| ATP12 chaperone protein [Ketogulonicigenium vulgare Y25]
 gi|343463474|gb|AEM41909.1| ATP12 ATPase [Ketogulonicigenium vulgare WSH-001]
          Length = 235

 Score = 62.0 bits (149), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 48/97 (49%), Gaps = 1/97 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRF+K+  I +    + + LD R L+TP      V S  LA A+A EW AQ E I+  T
Sbjct: 6   PKRFWKQATISQQGEAWAVLLDSRTLRTPAKAHLLVGSAELAQAVADEWQAQGEVIRPDT 65

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           M  T   N  ID+     +  +V  I  +  TD + Y
Sbjct: 66  MPFTRAVNVAIDHIGE-KRDAVVAEIAGYGGTDMLCY 101


>gi|347758847|ref|YP_004866409.1| ATP12 chaperone family protein [Micavibrio aeruginosavorus ARL-13]
 gi|347591365|gb|AEP10407.1| ATP12 chaperone family protein [Micavibrio aeruginosavorus ARL-13]
          Length = 237

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/100 (42%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 30  KRFYKKV-GILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           KRFYK V    E  G + I LD + +KTP+G +       LA  I AEW AQ E I   T
Sbjct: 2   KRFYKLVTSQAEPAGGFSIRLDGKPVKTPSGQMVVAPVSALADGIVAEWAAQGENIVPDT 61

Query: 89  MHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYH 126
           M LT I  T ID     R T  D+V     +LDTD + Y 
Sbjct: 62  MPLTQILITAIDRVAGERKTMTDMVA---VYLDTDLLCYQ 98


>gi|334343951|ref|YP_004552503.1| ATP12 ATPase [Sphingobium chlorophenolicum L-1]
 gi|334100573|gb|AEG47997.1| ATP12 ATPase [Sphingobium chlorophenolicum L-1]
          Length = 231

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V ++     YEI LD R ++TP      + +  LA AIA EW AQ +T+   +M
Sbjct: 2   KRFYKNVSVVPGETGYEIQLDDRPVRTPARAPLTLPNARLAEAIAEEWRAQGDTVDPRSM 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N  ID     +       I  + ++D + Y A 
Sbjct: 62  PFTGLANGAIDQIAPQSD-SFAAGIARYGESDLLCYRAE 99


>gi|359407954|ref|ZP_09200427.1| chaperone required for the assembly of F1-ATPase [SAR116 cluster
           alpha proteobacterium HIMB100]
 gi|356677020|gb|EHI49368.1| chaperone required for the assembly of F1-ATPase [SAR116 cluster
           alpha proteobacterium HIMB100]
          Length = 232

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V + +S+  Y+I LD R +++P   +  V +  LA A+ AEW A  E IQ   M
Sbjct: 2   KRFYKDVTVKKSDTGYQICLDGRPVRSPEKAIITVPTPELAEAVQAEWQAVDEDIQPEDM 61

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            L ++  TV D   P R T   L   +  +L  D + Y + 
Sbjct: 62  PLYSMAVTVTDRVTPQRQT---LANELAAYLHDDVLRYRSE 99


>gi|17987263|ref|NP_539897.1| hypothetical protein BMEI0980 [Brucella melitensis bv. 1 str. 16M]
 gi|260564008|ref|ZP_05834494.1| beta tubulin [Brucella melitensis bv. 1 str. 16M]
 gi|265991086|ref|ZP_06103643.1| ATP12 ATPase [Brucella melitensis bv. 1 str. Rev.1]
 gi|17982939|gb|AAL52161.1| hypothetical protein BMEI0980 [Brucella melitensis bv. 1 str. 16M]
 gi|260154024|gb|EEW89116.1| beta tubulin [Brucella melitensis bv. 1 str. 16M]
 gi|263001870|gb|EEZ14445.1| ATP12 ATPase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 260

 Score = 61.6 bits (148), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMQAQLPKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I++F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKLIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILHFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|295688950|ref|YP_003592643.1| ATP12 ATPase [Caulobacter segnis ATCC 21756]
 gi|295430853|gb|ADG10025.1| ATP12 ATPase [Caulobacter segnis ATCC 21756]
          Length = 241

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 20  SCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           S K   L KPKRFYK    +  +  + + LD R  K+P      + +  LA  IAAEWDA
Sbjct: 2   SDKAELLLKPKRFYKAAAAVPVDNGFAVQLDGRTPKSPARKPLVLPTLALAELIAAEWDA 61

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           Q E I  S M  + +  T ID  +  T+ D+ + I  +  +D + Y A+
Sbjct: 62  QVEFIDNSLMPASRLAFTAIDRVSE-TRADVAREITAYAASDHLCYRAD 109


>gi|154253211|ref|YP_001414035.1| ATP12 ATPase [Parvibaculum lavamentivorans DS-1]
 gi|154157161|gb|ABS64378.1| ATP12 ATPase [Parvibaculum lavamentivorans DS-1]
          Length = 271

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYKK         + I LD R +KTP      V    LA AIA EW+AQ E I    M
Sbjct: 43  KRFYKKAEAGPHEKGHAILLDGRAVKTPAKEPLAVPVLALARAIADEWEAQAEEIDPRAM 102

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILY 125
            LT + NT ID   P R     ++  ++NF  TD + Y
Sbjct: 103 KLTKLANTAIDLVAPRREA---VIAELVNFAATDLLCY 137


>gi|337269047|ref|YP_004613102.1| ATP12 ATPase [Mesorhizobium opportunistum WSM2075]
 gi|336029357|gb|AEH89008.1| ATP12 ATPase [Mesorhizobium opportunistum WSM2075]
          Length = 263

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V +      + + LD R ++TP   L  + +E  A  +A E+ AQ ETI   T
Sbjct: 32  PKRFYKTVSVAPVEDGFAVHLDGRPVRTPGKALLSLPTEAAAALVADEFAAQGETINPVT 91

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +  + NT ID      +  ++++I+ F  +D + Y A+
Sbjct: 92  MPVMRLVNTAIDGVASDPQA-VLEDILRFASSDLLCYRAD 130


>gi|261213990|ref|ZP_05928271.1| ATP12 ATPase [Brucella abortus bv. 3 str. Tulya]
 gi|260915597|gb|EEX82458.1| ATP12 ATPase [Brucella abortus bv. 3 str. Tulya]
          Length = 260

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMQAQLPKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKLIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|390450952|ref|ZP_10236536.1| ATP12 ATPase [Nitratireductor aquibiodomus RA22]
 gi|389661714|gb|EIM73313.1| ATP12 ATPase [Nitratireductor aquibiodomus RA22]
          Length = 263

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 67/121 (55%), Gaps = 5/121 (4%)

Query: 10  RYPRLINSIQSCKYSALEKP--KRFYKKVGIL-ESNGDYEISLDHRKLKTPNGVLFKVSS 66
           + P  ++ I+  + SA+ KP  KRFYK V +  E +G + + LD + ++TP     ++ +
Sbjct: 12  KTPAELDPIRRAQ-SAIRKPLPKRFYKDVSVTPEEDGGFAVRLDGKPVRTPGASAVRLPN 70

Query: 67  EPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           E  AL +A E+ AQ E I  ++M +T + NT ID    +    ++++++ +   D + Y 
Sbjct: 71  EATALLVAGEYQAQGEHIDPASMPVTRLVNTAIDG-VAVHAQAVLEDVLRYATGDLVCYR 129

Query: 127 A 127
           A
Sbjct: 130 A 130


>gi|23501883|ref|NP_698010.1| hypothetical protein BR1003 [Brucella suis 1330]
 gi|62289926|ref|YP_221719.1| hypothetical protein BruAb1_1008 [Brucella abortus bv. 1 str.
           9-941]
 gi|82699854|ref|YP_414428.1| beta tubulin [Brucella melitensis biovar Abortus 2308]
 gi|163843271|ref|YP_001627675.1| ATP12 ATPase [Brucella suis ATCC 23445]
 gi|189024168|ref|YP_001934936.1| Beta tubulin [Brucella abortus S19]
 gi|225627480|ref|ZP_03785517.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225852508|ref|YP_002732741.1| ATPase [Brucella melitensis ATCC 23457]
 gi|237815427|ref|ZP_04594425.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|256264002|ref|ZP_05466534.1| beta tubulin [Brucella melitensis bv. 2 str. 63/9]
 gi|256369425|ref|YP_003106933.1| hypothetical protein BMI_I1004 [Brucella microti CCM 4915]
 gi|260545325|ref|ZP_05821066.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260754738|ref|ZP_05867086.1| ATP12 ATPase [Brucella abortus bv. 6 str. 870]
 gi|260757961|ref|ZP_05870309.1| ATP12 ATPase [Brucella abortus bv. 4 str. 292]
 gi|260761784|ref|ZP_05874127.1| ATP12 ATPase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883759|ref|ZP_05895373.1| ATP12 ATPase [Brucella abortus bv. 9 str. C68]
 gi|261218656|ref|ZP_05932937.1| ATP12 ATPase [Brucella ceti M13/05/1]
 gi|261222171|ref|ZP_05936452.1| ATP12 ATPase [Brucella ceti B1/94]
 gi|261314269|ref|ZP_05953466.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261317637|ref|ZP_05956834.1| ATP12 ATPase [Brucella pinnipedialis B2/94]
 gi|261321846|ref|ZP_05961043.1| ATP12 ATPase [Brucella ceti M644/93/1]
 gi|261752307|ref|ZP_05996016.1| ATP12 ATPase [Brucella suis bv. 5 str. 513]
 gi|261754964|ref|ZP_05998673.1| ATP12 ATPase [Brucella suis bv. 3 str. 686]
 gi|261758191|ref|ZP_06001900.1| beta tubulin [Brucella sp. F5/99]
 gi|265988672|ref|ZP_06101229.1| ATP12 ATPase [Brucella pinnipedialis M292/94/1]
 gi|265994923|ref|ZP_06107480.1| ATP12 ATPase [Brucella melitensis bv. 3 str. Ether]
 gi|265998135|ref|ZP_06110692.1| ATP12 ATPase [Brucella ceti M490/95/1]
 gi|294852406|ref|ZP_06793079.1| ATP12 ATPase [Brucella sp. NVSL 07-0026]
 gi|297248327|ref|ZP_06932045.1| ATP12 ATPase [Brucella abortus bv. 5 str. B3196]
 gi|340790621|ref|YP_004756086.1| hypothetical protein BPI_I1042 [Brucella pinnipedialis B2/94]
 gi|376273269|ref|YP_005151847.1| ATP12 ATPase [Brucella abortus A13334]
 gi|376280677|ref|YP_005154683.1| hypothetical protein BSVBI22_A0999 [Brucella suis VBI22]
 gi|384211370|ref|YP_005600452.1| ATP12 ATPase [Brucella melitensis M5-90]
 gi|384224671|ref|YP_005615835.1| hypothetical protein BS1330_I0999 [Brucella suis 1330]
 gi|384408476|ref|YP_005597097.1| Beta tubulin [Brucella melitensis M28]
 gi|384445069|ref|YP_005603788.1| hypothetical protein [Brucella melitensis NI]
 gi|423166891|ref|ZP_17153594.1| hypothetical protein M17_00581 [Brucella abortus bv. 1 str. NI435a]
 gi|423170735|ref|ZP_17157410.1| hypothetical protein M19_01268 [Brucella abortus bv. 1 str. NI474]
 gi|423173183|ref|ZP_17159854.1| hypothetical protein M1A_00581 [Brucella abortus bv. 1 str. NI486]
 gi|423177530|ref|ZP_17164176.1| hypothetical protein M1E_01772 [Brucella abortus bv. 1 str. NI488]
 gi|423180165|ref|ZP_17166806.1| hypothetical protein M1G_01265 [Brucella abortus bv. 1 str. NI010]
 gi|423183297|ref|ZP_17169934.1| hypothetical protein M1I_01266 [Brucella abortus bv. 1 str. NI016]
 gi|423185763|ref|ZP_17172377.1| hypothetical protein M1K_00581 [Brucella abortus bv. 1 str. NI021]
 gi|423188899|ref|ZP_17175509.1| hypothetical protein M1M_00581 [Brucella abortus bv. 1 str. NI259]
 gi|23347822|gb|AAN29925.1| conserved hypothetical protein [Brucella suis 1330]
 gi|62196058|gb|AAX74358.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82615955|emb|CAJ10978.1| Beta tubulin [Brucella melitensis biovar Abortus 2308]
 gi|163673994|gb|ABY38105.1| ATP12 ATPase [Brucella suis ATCC 23445]
 gi|189019740|gb|ACD72462.1| Beta tubulin [Brucella abortus S19]
 gi|225617485|gb|EEH14530.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|225640873|gb|ACO00787.1| ATP12 ATPase [Brucella melitensis ATCC 23457]
 gi|237790264|gb|EEP64474.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|255999585|gb|ACU47984.1| hypothetical protein BMI_I1004 [Brucella microti CCM 4915]
 gi|260096732|gb|EEW80607.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260668279|gb|EEX55219.1| ATP12 ATPase [Brucella abortus bv. 4 str. 292]
 gi|260672216|gb|EEX59037.1| ATP12 ATPase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674846|gb|EEX61667.1| ATP12 ATPase [Brucella abortus bv. 6 str. 870]
 gi|260873287|gb|EEX80356.1| ATP12 ATPase [Brucella abortus bv. 9 str. C68]
 gi|260920755|gb|EEX87408.1| ATP12 ATPase [Brucella ceti B1/94]
 gi|260923745|gb|EEX90313.1| ATP12 ATPase [Brucella ceti M13/05/1]
 gi|261294536|gb|EEX98032.1| ATP12 ATPase [Brucella ceti M644/93/1]
 gi|261296860|gb|EEY00357.1| ATP12 ATPase [Brucella pinnipedialis B2/94]
 gi|261303295|gb|EEY06792.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261738175|gb|EEY26171.1| beta tubulin [Brucella sp. F5/99]
 gi|261742060|gb|EEY29986.1| ATP12 ATPase [Brucella suis bv. 5 str. 513]
 gi|261744717|gb|EEY32643.1| ATP12 ATPase [Brucella suis bv. 3 str. 686]
 gi|262552603|gb|EEZ08593.1| ATP12 ATPase [Brucella ceti M490/95/1]
 gi|262766036|gb|EEZ11825.1| ATP12 ATPase [Brucella melitensis bv. 3 str. Ether]
 gi|263094146|gb|EEZ18068.1| beta tubulin [Brucella melitensis bv. 2 str. 63/9]
 gi|264660869|gb|EEZ31130.1| ATP12 ATPase [Brucella pinnipedialis M292/94/1]
 gi|294820995|gb|EFG37994.1| ATP12 ATPase [Brucella sp. NVSL 07-0026]
 gi|297175496|gb|EFH34843.1| ATP12 ATPase [Brucella abortus bv. 5 str. B3196]
 gi|326409023|gb|ADZ66088.1| Beta tubulin [Brucella melitensis M28]
 gi|326538733|gb|ADZ86948.1| ATP12 ATPase [Brucella melitensis M5-90]
 gi|340559080|gb|AEK54318.1| hypothetical protein BPI_I1042 [Brucella pinnipedialis B2/94]
 gi|343382851|gb|AEM18343.1| hypothetical protein BS1330_I0999 [Brucella suis 1330]
 gi|349743060|gb|AEQ08603.1| hypothetical protein BMNI_I0980 [Brucella melitensis NI]
 gi|358258276|gb|AEU06011.1| hypothetical protein BSVBI22_A0999 [Brucella suis VBI22]
 gi|363400875|gb|AEW17845.1| ATP12 ATPase [Brucella abortus A13334]
 gi|374539313|gb|EHR10817.1| hypothetical protein M19_01268 [Brucella abortus bv. 1 str. NI474]
 gi|374543122|gb|EHR14606.1| hypothetical protein M17_00581 [Brucella abortus bv. 1 str. NI435a]
 gi|374543738|gb|EHR15220.1| hypothetical protein M1A_00581 [Brucella abortus bv. 1 str. NI486]
 gi|374548729|gb|EHR20176.1| hypothetical protein M1G_01265 [Brucella abortus bv. 1 str. NI010]
 gi|374549360|gb|EHR20803.1| hypothetical protein M1I_01266 [Brucella abortus bv. 1 str. NI016]
 gi|374550012|gb|EHR21453.1| hypothetical protein M1E_01772 [Brucella abortus bv. 1 str. NI488]
 gi|374558557|gb|EHR29950.1| hypothetical protein M1M_00581 [Brucella abortus bv. 1 str. NI259]
 gi|374559854|gb|EHR31239.1| hypothetical protein M1K_00581 [Brucella abortus bv. 1 str. NI021]
          Length = 260

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMQAQLPKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKLIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|161618956|ref|YP_001592843.1| ATP12 ATPase [Brucella canis ATCC 23365]
 gi|260566457|ref|ZP_05836927.1| beta tubulin [Brucella suis bv. 4 str. 40]
 gi|376274258|ref|YP_005114697.1| beta tubulin [Brucella canis HSK A52141]
 gi|161335767|gb|ABX62072.1| ATP12 ATPase [Brucella canis ATCC 23365]
 gi|260155975|gb|EEW91055.1| beta tubulin [Brucella suis bv. 4 str. 40]
 gi|363402825|gb|AEW13120.1| beta tubulin [Brucella canis HSK A52141]
          Length = 260

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMQAQLPKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKLIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|393768102|ref|ZP_10356644.1| ATP12 ATPase [Methylobacterium sp. GXF4]
 gi|392726495|gb|EIZ83818.1| ATP12 ATPase [Methylobacterium sp. GXF4]
          Length = 262

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 7/129 (5%)

Query: 2   FVGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVL 61
           ++G+      P  + + +     AL  P+RFY++ G  E    + ++LD R   TP    
Sbjct: 8   WLGEPGDGERPDPVRAARGHAKPAL--PRRFYQEAGFAEGPDGFRLTLDGRPANTPARNP 65

Query: 62  FKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDN--PNRLTKFDLVQNIINFLD 119
             + +  LA  +AAEW AQ   I  + M LT + NT ID   P       +V+++  +  
Sbjct: 66  LSLPTRALAEKVAAEWAAQDTVIDPARMPLTRLANTSIDGVAPRHAA---VVEDLCAYAG 122

Query: 120 TDTILYHAN 128
           TD + Y A 
Sbjct: 123 TDLLAYRAG 131


>gi|418056163|ref|ZP_12694216.1| ATP12 ATPase [Hyphomicrobium denitrificans 1NES1]
 gi|353209382|gb|EHB74785.1| ATP12 ATPase [Hyphomicrobium denitrificans 1NES1]
          Length = 266

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 25  ALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHE 82
           +L KP  +RFYK   + +    ++I LD R +KTP      V ++ LA AIA EW AQ E
Sbjct: 32  SLAKPLARRFYKGASVSDV-APFQILLDGRAIKTPKKRALAVPTKALAEAIAEEWQAQQE 90

Query: 83  TIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +  S M LT   NT ID  +  T+  +  +I+ +  +D + Y A 
Sbjct: 91  FVDPSRMPLTRFANTAIDAVSE-TEDAVAADIVAYAGSDLVCYRAE 135


>gi|261325096|ref|ZP_05964293.1| ATP12 ATPase [Brucella neotomae 5K33]
 gi|261301076|gb|EEY04573.1| ATP12 ATPase [Brucella neotomae 5K33]
          Length = 260

 Score = 61.6 bits (148), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMQAQLPKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKLIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|89053117|ref|YP_508568.1| ATP12 ATPase [Jannaschia sp. CCS1]
 gi|88862666|gb|ABD53543.1| ATP12 ATPase [Jannaschia sp. CCS1]
          Length = 237

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 5/103 (4%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+ +  + E++G +++ LD R + TP  +   + +  +ALA+AAEW+AQ   I   
Sbjct: 5   KAKRFWTEATVAEADGGFKVLLDGRGVNTPGKLPLVMPTRAMALAVAAEWNAQEGEIAPL 64

Query: 88  TMHLTAICNTVIDNPNRLTK--FDLVQNIINFLDTDTILYHAN 128
           TM  T   N+ I+   R+T    D+   ++ + +TD + Y A 
Sbjct: 65  TMPHTRSANSAIE---RVTPQLADVSDMLLGYAETDLLCYRAE 104


>gi|306840490|ref|ZP_07473249.1| ATP12 ATPase [Brucella sp. BO2]
 gi|306289505|gb|EFM60723.1| ATP12 ATPase [Brucella sp. BO2]
          Length = 260

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY K  + ES G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMQAQLPKRFYDKAEVAESEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + +   A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTRAAAQIVADEFAAQEKVIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|167524958|ref|XP_001746814.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774594|gb|EDQ88221.1| predicted protein [Monosiga brevicollis MX1]
          Length = 743

 Score = 61.2 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 6/84 (7%)

Query: 39  LESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNT 97
           +E +GD Y + LD R LKTP G  F V S+ LA  +A EW  Q E +  +TM+++A+ NT
Sbjct: 526 VEKDGDKYGVFLDQRHLKTPMGKKFSVHSDELAHIVAMEWATQGEHLTPATMYVSALSNT 585

Query: 98  VIDNPNRLTKFDLVQNIINFLDTD 121
            +D+P++      +++ + F D D
Sbjct: 586 ALDHPSK-----QMRDTVVFRDAD 604


>gi|407788347|ref|ZP_11135479.1| hypothetical protein B30_19901 [Celeribacter baekdonensis B30]
 gi|407197628|gb|EKE67682.1| hypothetical protein B30_19901 [Celeribacter baekdonensis B30]
          Length = 235

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+KK  +    G +EI LD R ++TP      V +  LA  IAAEW+AQ   I  +
Sbjct: 5   KAKRFWKKTTVEAVEGGFEIRLDGRPVRTPAKAPLIVPTRALAEMIAAEWEAQEGDIDPN 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           TM  T   N  ID    +   ++   + ++ D+D + Y A
Sbjct: 65  TMPATRSANAAIDKVA-IQHAEVANLLADYGDSDLLCYRA 103


>gi|294675891|ref|YP_003576506.1| ATP12 chaperone protein family [Rhodobacter capsulatus SB 1003]
 gi|294474711|gb|ADE84099.1| ATP12 chaperone protein family [Rhodobacter capsulatus SB 1003]
          Length = 237

 Score = 60.8 bits (146), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K   +    G + + LD R +KTP      + ++ +A A+AAEW AQ   I  +TM
Sbjct: 7   KRFWKSATVEPCEGGFTVKLDGRAVKTPAKAALVLPTQAMAEAVAAEWQAQGAKIDPTTM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
            +T   N  +D   R  + ++   I  + +TD + Y A  
Sbjct: 67  PVTRSANAALDK-VRAQQAEVAALIAAYGETDLLCYRAKM 105


>gi|388584014|gb|EIM24315.1| ATP12-domain-containing protein [Wallemia sebi CBS 633.66]
          Length = 298

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 4/107 (3%)

Query: 23  YSALEKP-KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSE--PLALAIAAEWDA 79
           Y+A E+  KRF+K   +  SNG + + LD RKL+TP G +  + S    LAL IA EW +
Sbjct: 56  YTAAERTMKRFWKTANVSNSNGRHIVHLDTRKLRTPAGNVIDLPSNKGALALLIAHEWQS 115

Query: 80  QHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILY 125
           Q + I+   + +T++ +  +D+  ++  + +    +I + +TD   Y
Sbjct: 116 QDKVIKAHALPITSLASRALDSFKDQSERIETCDKLIKYFETDATCY 162


>gi|423712840|ref|ZP_17687138.1| hypothetical protein MCQ_01594 [Bartonella washoensis Sb944nv]
 gi|395410536|gb|EJF77090.1| hypothetical protein MCQ_01594 [Bartonella washoensis Sb944nv]
          Length = 262

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           ++S    PKRFYK+V I    G + I LD   +KTP    F V  E  A  +A E+++Q 
Sbjct: 23  QFSCSSLPKRFYKEVKITREEGGFSILLDKYPVKTPARRPFLVPKEACAALVAQEFESQK 82

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           + I    M +T   NTVID      +  + ++++ F+  D I Y A 
Sbjct: 83  QVIDPIKMPITRFVNTVIDGIADDMQV-IFEDLLRFVACDMIFYRAQ 128


>gi|148560190|ref|YP_001258943.1| hypothetical protein BOV_0969 [Brucella ovis ATCC 25840]
 gi|148371447|gb|ABQ61426.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
          Length = 234

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY+K  + ES G + + LD R +KTP   L  + +   A  +A E+ AQ + I    
Sbjct: 6   PKRFYEKAEVAESEGGFAVHLDGRPVKTPARNLLLLPTRAAAQIVADEFAAQEKLIDPGK 65

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T + NT ID   +  +  + ++I+ F  TD + Y A+
Sbjct: 66  MPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDMLCYRAD 104


>gi|427429385|ref|ZP_18919420.1| Chaperone protein [Caenispirillum salinarum AK4]
 gi|425880578|gb|EKV29274.1| Chaperone protein [Caenispirillum salinarum AK4]
          Length = 242

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 30  KRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           KRFYK    + + G  + + LD R ++TP+     V    LA AIAAEW+ Q ET+    
Sbjct: 10  KRFYKTAEAVPAEGGLHAVHLDGRPVRTPSKAALAVPFPALAEAIAAEWNEQGETLVLDN 69

Query: 89  MHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYH 126
           M LT + N+ ID   P R T   +++ ++ F +T+ + Y 
Sbjct: 70  MPLTQLANSAIDRVAPLRDT---MIEEVLRFAETELLCYR 106


>gi|429769322|ref|ZP_19301435.1| ATP12 chaperone protein [Brevundimonas diminuta 470-4]
 gi|429187336|gb|EKY28252.1| ATP12 chaperone protein [Brevundimonas diminuta 470-4]
          Length = 253

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           E+ KRF+K  G+   +G + + LD R  KTP G    + +E  A  +A EW+ Q E +  
Sbjct: 22  ERIKRFWKSAGVEARDGGWIVLLDGRAPKTPAGNSIVLPTEAAARLVAEEWNDQGEHLAP 81

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +TM  T + +T ID  ++ T+  + + I  +  +D + Y A 
Sbjct: 82  ATMPATRLASTAIDRVSQ-TRGPVAEEIARYAGSDVLCYLAE 122


>gi|224000205|ref|XP_002289775.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974983|gb|EED93312.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 408

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 9/95 (9%)

Query: 37  GILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICN 96
           G    +G + ++LD R L+TP G+   + S  LALA+A+EWDAQ + ++ + M L  +C 
Sbjct: 135 GKSPPSGWHTVTLDGRALRTPLGLPLTLPSAHLALAVASEWDAQEKVLRPAQMPLMTLCC 194

Query: 97  TVID----NPNRLTKFDLVQNIINFLDTDTILYHA 127
           T ID    +P+        Q+++ +L  DT+ Y A
Sbjct: 195 TAIDQVASDPSAHQ-----QDVMRYLRNDTVCYWA 224


>gi|384218114|ref|YP_005609280.1| hypothetical protein BJ6T_44230 [Bradyrhizobium japonicum USDA 6]
 gi|354957013|dbj|BAL09692.1| hypothetical protein BJ6T_44230 [Bradyrhizobium japonicum USDA 6]
          Length = 264

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+ G+ E+ G + I+LD R ++TP+     + S  LA A+AAEW AQ ETI   TM
Sbjct: 30  KRFYKEAGVAEAEGGFAITLDGRPIRTPSARQVVIPSRVLADAVAAEWAAQGETIDPVTM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
            LT I N+V++    + + +LV  ++  + +TD + Y A 
Sbjct: 90  PLTRIANSVVE--GVIDRVELVADDLARYFETDLLFYRAG 127


>gi|303288920|ref|XP_003063748.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454816|gb|EEH52121.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 334

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 5/99 (5%)

Query: 31  RFYKKVGIL---ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           RFYK V ++   ++ G + I+LD + LKTP+     V S+ LALA+AAEW+ Q  ++I+ 
Sbjct: 98  RFYKSVSVVPQKDAPGLWGIALDGKTLKTPSKAPLAVPSKALALAVAAEWEWQSGKSIRP 157

Query: 87  STMHLTAICNTVIDNPNR-LTKFDLVQNIINFLDTDTIL 124
            TM L A+  T +D  ++   +   +  ++ F  TD +L
Sbjct: 158 FTMPLMALVATAMDQMSKPAIRAQHIHTLLEFFPTDVVL 196


>gi|329851363|ref|ZP_08266120.1| ATP12 chaperone family protein [Asticcacaulis biprosthecum C19]
 gi|328840209|gb|EGF89781.1| ATP12 chaperone family protein [Asticcacaulis biprosthecum C19]
          Length = 243

 Score = 60.1 bits (144), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 6/103 (5%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           +PKRF+K+V + E  G   I+LD R +KTP+G    +    LA  +AAEW A  E +   
Sbjct: 16  RPKRFWKEVTVTEGLG---IALDGRPVKTPSGAHLVLPVHTLAHPVAAEWAAVGEHVDYD 72

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHANF 129
            M LT +    ID  P+   + ++V  ++ + +TD I Y + +
Sbjct: 73  AMPLTRLGFAAIDRMPD--IQDEIVSEVLRYAETDLICYPSEY 113


>gi|209884848|ref|YP_002288705.1| ATP12 ATPase [Oligotropha carboxidovorans OM5]
 gi|337741508|ref|YP_004633236.1| ATP12 ATPase [Oligotropha carboxidovorans OM5]
 gi|386030524|ref|YP_005951299.1| ATP12 ATPase family protein [Oligotropha carboxidovorans OM4]
 gi|209873044|gb|ACI92840.1| ATP12 ATPase [Oligotropha carboxidovorans OM5]
 gi|336095592|gb|AEI03418.1| ATP12 ATPase family protein [Oligotropha carboxidovorans OM4]
 gi|336099172|gb|AEI06995.1| ATP12 ATPase family protein [Oligotropha carboxidovorans OM5]
          Length = 258

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+   + E    + ++LD + ++TP   L       LA  +AAEW AQ E I   +M
Sbjct: 30  KRFYQAASVDEMPEGFAVTLDGKPVRTPGKRLLAAPVRTLADTMAAEWGAQKEQIDPMSM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
            +T + N+VID         +  +   +L TD + Y A+F
Sbjct: 90  PMTRLANSVIDGVTE-NAVAVRDDAARYLGTDLLFYRASF 128


>gi|357028777|ref|ZP_09090802.1| ATP12 ATPase [Mesorhizobium amorphae CCNWGS0123]
 gi|355537477|gb|EHH06733.1| ATP12 ATPase [Mesorhizobium amorphae CCNWGS0123]
          Length = 263

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V +      + + LD + ++TP      + +E  A  +A E+DAQ ETI   +
Sbjct: 32  PKRFYKAVSVAPVEDGFAVHLDGKPVRTPGKAQLVLPTEKAAALVAGEFDAQGETIDPVS 91

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +  + NT ID      +  ++++I+ F  +D + Y A+
Sbjct: 92  MPVMRLVNTAIDGVASDPQA-VLEDILRFASSDLLCYRAD 130


>gi|404319119|ref|ZP_10967052.1| ATP12 ATPase [Ochrobactrum anthropi CTS-325]
          Length = 260

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + E  G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMLAQLPKRFYEKAEVAEVEGGFAVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + ++  A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTKAAAQIVADEFTAQEKVIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|384485163|gb|EIE77343.1| hypothetical protein RO3G_02047 [Rhizopus delemar RA 99-880]
          Length = 241

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 8/104 (7%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRST 88
           RF+K+ GI E      + LD R L+TP+   V F      LAL  AAEWDAQ + ++  +
Sbjct: 3   RFWKQAGIKEDENKVTVVLDQRNLRTPSKHIVQFPKQQRELALLTAAEWDAQTKNLKPHS 62

Query: 89  MHLTAICNTVIDNPNRLTKFD------LVQNIINFLDTDTILYH 126
           + LT+I     D  + +   D      ++  ++++ DTD++ YH
Sbjct: 63  LPLTSIIARSFDAFDPVLAEDPTIRDAVIDKLMSYFDTDSVCYH 106


>gi|449543527|gb|EMD34503.1| hypothetical protein CERSUDRAFT_125608 [Ceriporiopsis subvermispora
           B]
          Length = 286

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K VGI   +    I+LD R L+TP G  +L       +A  IA EW+ Q   ++  
Sbjct: 54  KRFWKSVGIESRDNGLAITLDKRPLRTPGGKPLLLPQHKRLVAALIATEWENQETLLKPH 113

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            + +T++ +  ID   +  ++ ++   ++ +LDTDTI YH
Sbjct: 114 ALPVTSLASRAIDAFTDEKSRSEVRSLLLKYLDTDTICYH 153


>gi|403420523|emb|CCM07223.1| predicted protein [Fibroporia radiculosa]
          Length = 547

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K VGI      + ++LD R L+TP+G  ++   +   +A  IA+EW+ Q   ++  
Sbjct: 315 KRFWKTVGIDAREDGFVVTLDKRPLRTPSGKHLILPRNKRLVATLIASEWENQETLLKPH 374

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
           T+ +T+I +  ID   +  T+ ++   ++ + +TDTI +H
Sbjct: 375 TLPMTSIASRAIDAFSDEDTRREVRAQLLKYFETDTICFH 414


>gi|114771238|ref|ZP_01448658.1| hypothetical protein OM2255_07775 [Rhodobacterales bacterium
           HTCC2255]
 gi|114548163|gb|EAU51050.1| hypothetical protein OM2255_07775 [Rhodobacterales bacterium
           HTCC2255]
          Length = 238

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K   +++ N  Y + LD R ++TP+  L KV    +A  IA EW AQ E +  +TM
Sbjct: 7   KRFWKDARVVDLNDGYVVELDGRVIRTPSKALLKVDFRKIADQIAFEWMAQEEIVNPATM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
             T + N+VID    + K  +++ + ++  +D + Y A
Sbjct: 67  PNTRMANSVIDKI-MVNKEAVIEMLSDYSGSDLLCYRA 103


>gi|395782057|ref|ZP_10462465.1| hypothetical protein MCY_00862 [Bartonella rattimassiliensis 15908]
 gi|395419789|gb|EJF86079.1| hypothetical protein MCY_00862 [Bartonella rattimassiliensis 15908]
          Length = 260

 Score = 59.7 bits (143), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY +V I    G + I LD R +KTP    F V +E  A  +  E+++Q + +  + 
Sbjct: 30  PKRFYGQVKIACEEGGFTILLDERPVKTPARRHFHVPTEAFAELVVKEFESQKQVVDPAK 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NTVID      +  + ++++ F+  D + Y A 
Sbjct: 90  MPMTRLVNTVIDGIADDMQV-IFEDLLRFVACDMVFYRAQ 128


>gi|395779786|ref|ZP_10460255.1| hypothetical protein MCW_00342 [Bartonella washoensis 085-0475]
 gi|395420161|gb|EJF86446.1| hypothetical protein MCW_00342 [Bartonella washoensis 085-0475]
          Length = 262

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK+V I    G + I LD   +KTP    F V  E  A  +A E+++Q + I    
Sbjct: 30  PKRFYKEVKITREEGGFSILLDKYPVKTPARRPFLVPKEACAALVAQEFESQKQVIDPIK 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T   NTVID      +  + ++++ F+  D I Y A 
Sbjct: 90  MPITRFVNTVIDGIADDMQV-IFEDLLRFVACDMIFYRAQ 128


>gi|126728210|ref|ZP_01744026.1| hypothetical protein SSE37_19507 [Sagittula stellata E-37]
 gi|126711175|gb|EBA10225.1| hypothetical protein SSE37_19507 [Sagittula stellata E-37]
          Length = 236

 Score = 59.3 bits (142), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K   +  S   + + LD R +KTP      V +E LA A+AAEW AQ E +   TM
Sbjct: 7   KRFWKDATVEPSGPGFAVKLDGRGVKTPAKTPLVVPTEGLADAVAAEWRAQEEHVNPMTM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N+ +D      + ++   +  + D+D + Y A+
Sbjct: 67  PFTRMSNSALDKVA-TQRAEVADMLAAYGDSDLLCYRAD 104


>gi|427408842|ref|ZP_18899044.1| hypothetical protein HMPREF9718_01518 [Sphingobium yanoikuyae ATCC
           51230]
 gi|425713152|gb|EKU76166.1| hypothetical protein HMPREF9718_01518 [Sphingobium yanoikuyae ATCC
           51230]
          Length = 231

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V +      + I LD R ++TP      + +  LA A+A EW  Q ET+  +TM
Sbjct: 2   KRFYKDVTVEPVEAGFAIRLDGRPVRTPARAELALPNAVLAEAVAQEWRDQGETVDPATM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N  ID+   NR  KF    +I  +  TD + Y A 
Sbjct: 62  AFTGLANAAIDHIAGNR-AKF--AADIAEYGGTDMLCYRAE 99


>gi|153009416|ref|YP_001370631.1| ATP12 ATPase [Ochrobactrum anthropi ATCC 49188]
 gi|151561304|gb|ABS14802.1| ATP12 ATPase [Ochrobactrum anthropi ATCC 49188]
          Length = 260

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 3   VGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLF 62
            GKQ +   P     +++ K    + PKRFY+K  + E  G + + LD R +KTP   L 
Sbjct: 10  AGKQLSDENP----IVRAQKQMLAQLPKRFYEKAEVAEVEGGFTVHLDGRPVKTPARNLL 65

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + ++  A  +A E+ AQ + I    M  T + NT ID   +  +  + ++I+ F  TD 
Sbjct: 66  LLPTKAAAQIVADEFTAQEKVIDPGKMPATRLVNTAIDGIAQDPQA-VFEDILRFAGTDM 124

Query: 123 ILYHAN 128
           + Y A+
Sbjct: 125 LCYRAD 130


>gi|395778006|ref|ZP_10458519.1| hypothetical protein MCU_00220 [Bartonella elizabethae Re6043vi]
 gi|423715931|ref|ZP_17690152.1| hypothetical protein MEE_01349 [Bartonella elizabethae F9251]
 gi|395418315|gb|EJF84642.1| hypothetical protein MCU_00220 [Bartonella elizabethae Re6043vi]
 gi|395428375|gb|EJF94452.1| hypothetical protein MEE_01349 [Bartonella elizabethae F9251]
          Length = 265

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 16  NSIQSCK-YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIA 74
           +S+Q  +  S    PKRFY++V I    G + I LD   +KTP    F V ++  A  IA
Sbjct: 21  SSVQKTQNLSCQPHPKRFYREVKIACEEGGFTILLDEHPVKTPAKRHFLVPTQVFAEFIA 80

Query: 75  AEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            E+++Q   I  +TM +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 81  QEFESQKNVIDPATMPMTRLVNTVIDGIADDMQV-VFEDLLRFVACDMIFYRAQ 133


>gi|398384719|ref|ZP_10542747.1| chaperone required for the assembly of F1-ATPase [Sphingobium sp.
           AP49]
 gi|397721999|gb|EJK82544.1| chaperone required for the assembly of F1-ATPase [Sphingobium sp.
           AP49]
          Length = 231

 Score = 59.3 bits (142), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V +      + I LD R ++TP      + +  LA A+A EW  Q ET+  +TM
Sbjct: 2   KRFYKDVTVEPVEAGFAIRLDGRAVRTPARAELALPNAVLAEAVAQEWRDQGETVDPATM 61

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
             T + N  ID+   NR  KF    +I  +  TD + Y A 
Sbjct: 62  AFTGLANAAIDHIVDNR-AKF--AADIAEYGGTDMLCYRAE 99


>gi|319407392|emb|CBI81043.1| conserved hypothetical protein [Bartonella sp. 1-1C]
          Length = 261

 Score = 59.3 bits (142), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           K S    PKRFY+KV +    G + I LD R LKTP    F +  E LA  +A E+ AQ 
Sbjct: 23  KLSCRPLPKRFYEKVDVTCKEGKFFILLDGRLLKTPAKRDFFLPVEMLAGLVAQEFTAQK 82

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             I  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 83  AVIDPAKMPITRLVNTVIDGVIDNMQI-IFEDLLRFVACDMIFYRAQ 128


>gi|114704675|ref|ZP_01437583.1| hypothetical protein FP2506_07061 [Fulvimarina pelagi HTCC2506]
 gi|114539460|gb|EAU42580.1| hypothetical protein FP2506_07061 [Fulvimarina pelagi HTCC2506]
          Length = 251

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY++  +  +   Y++ LD R +KTP      + ++ ++ AI  EW AQ E I   T
Sbjct: 23  PKRFYEEAALGSAETGYQVLLDGRPVKTPAKKALVLPNDEISNAIRDEWAAQGERIDPGT 82

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T + NTV+D    L    ++  +  + +TD + Y A 
Sbjct: 83  MPATRLANTVVDA-VALDPKPVLAEVPRYAETDLLFYRAG 121


>gi|395767189|ref|ZP_10447724.1| hypothetical protein MCS_00657 [Bartonella doshiae NCTC 12862]
 gi|395414502|gb|EJF80944.1| hypothetical protein MCS_00657 [Bartonella doshiae NCTC 12862]
          Length = 300

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 20  SCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           SC+  A    KRFY++V I    G + I LD   +KTP    F V +E  A  +A E+++
Sbjct: 65  SCQMLA----KRFYREVKIFCEEGGFSILLDECPVKTPAKRHFLVPTEVFAALVAEEFES 120

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           Q E I  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 121 QKEVIDPAKMPMTRLVNTVIDGIVDDMQV-VFEDLLRFVACDMIFYRAQ 168


>gi|260577147|ref|ZP_05845124.1| ATP12 ATPase [Rhodobacter sp. SW2]
 gi|259020621|gb|EEW23940.1| ATP12 ATPase [Rhodobacter sp. SW2]
          Length = 236

 Score = 58.9 bits (141), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+         + + LD R +KTP   L +V +  LA  IAAEWDAQ   I+   M
Sbjct: 8   KRFWKQATAEPVGAAFTVRLDGRAVKTPAKTLLEVPTLALAQEIAAEWDAQQGVIKPDAM 67

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
             T + N+ +D      +F  V  +I  +  +D I Y AN
Sbjct: 68  PFTRMANSALDKVA--PQFAEVAGLIAAYGASDLICYRAN 105


>gi|383771172|ref|YP_005450237.1| hypothetical protein S23_29170 [Bradyrhizobium sp. S23321]
 gi|381359295|dbj|BAL76125.1| hypothetical protein S23_29170 [Bradyrhizobium sp. S23321]
          Length = 264

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+ G  E+ G + I+LD + ++TP+G    + S  LA A+AAEW AQ ETI   TM
Sbjct: 30  KRFYKEAGATEAEGGFAITLDGKPIRTPSGRQVVIPSRALADAVAAEWAAQGETIDPVTM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
            LT I N+V++    + + +LV  ++  + ++D + Y A 
Sbjct: 90  PLTRIANSVVE--GVVDRVELVTDDLAKYFESDLLFYRAG 127


>gi|126724898|ref|ZP_01740741.1| hypothetical protein RB2150_13721 [Rhodobacterales bacterium
           HTCC2150]
 gi|126706062|gb|EBA05152.1| hypothetical protein RB2150_13721 [Rhodobacteraceae bacterium
           HTCC2150]
          Length = 236

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K V I E++  + I+LD R +KTP      V S+ LA  +A EW+A  E I    M
Sbjct: 7   KRFWKTVEISENDQGFGITLDGRSVKTPLKTALTVPSKSLAERVAREWEAVEEKIDPREM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
             T   N  +D  +  T+   V N+I ++ D+D + Y A+
Sbjct: 67  PFTRSVNAALDKVS--TQHSEVANLIADYADSDLLCYRAD 104


>gi|255572002|ref|XP_002526942.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor, putative [Ricinus communis]
 gi|223533694|gb|EEF35429.1| ATP synthase mitochondrial F1 complex assembly factor 2,
           mitochondrial precursor, putative [Ricinus communis]
          Length = 334

 Score = 58.9 bits (141), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)

Query: 30  KRFYKKVGILESNGD--YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFYKKV   E++    Y + LD+R LKTP+    K+ +  LA AIAAEWD Q  + I+ 
Sbjct: 97  KRFYKKVTTREADDGIGYTVMLDYRTLKTPSKKPLKLPTLSLAKAIAAEWDCQQTDGIRP 156

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            TM L  +  T ++    LT+  +++N++   + D +   A
Sbjct: 157 FTMPLMKLACTALER-VPLTRLKIIENLMKKFNQDLVFCRA 196


>gi|240850771|ref|YP_002972171.1| hypothetical protein Bgr_12440 [Bartonella grahamii as4aup]
 gi|240267894|gb|ACS51482.1| hypothetical protein Bgr_12440 [Bartonella grahamii as4aup]
          Length = 262

 Score = 58.5 bits (140), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V I    G + I LD R +KTP    F V +E  A  +A E+++Q   +  + M
Sbjct: 33  KRFYKQVKIACEEGRFTILLDERPVKTPARRHFHVPTEVFAEYVAQEFESQKHVVDPAKM 92

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 93  PMTRLVNTVIDGIADDMQV-VFEDLLRFVACDMIFYRAQ 130


>gi|456354594|dbj|BAM89039.1| conserved hypothetical protein [Agromonas oligotrophica S58]
          Length = 260

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 64/112 (57%), Gaps = 3/112 (2%)

Query: 19  QSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAE 76
           Q     A+ KP  KRFYK  GI  + G + ++LD R ++TP+G +  + +  LA A AAE
Sbjct: 17  QESARQAMRKPLRKRFYKDAGIAAAEGGFNVTLDGRPIRTPSGRVVVIPARELAEAAAAE 76

Query: 77  WDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           W AQ ++I  +TM LT   N+V+ +    T  D+ ++I  +L +D + Y A 
Sbjct: 77  WQAQGDSIDPATMPLTRFANSVVQSVVDRTD-DVREDIAKYLQSDLLFYRAG 127


>gi|407783944|ref|ZP_11131134.1| hypothetical protein P24_16897 [Oceanibaculum indicum P24]
 gi|407198946|gb|EKE68971.1| hypothetical protein P24_16897 [Oceanibaculum indicum P24]
          Length = 232

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+ GI  +   + ++LD + ++TP      + +  LA AIAAEW AQ E I+   M
Sbjct: 2   KRFYKQAGIASAADGHRVTLDGKPIRTPAKAEMVLPTAALAEAIAAEWQAQAEEIRPGDM 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT +  T ID  ++  +  +++ ++ + +TD + YHA 
Sbjct: 62  PLTQLAATAIDRVSK-ERAAVIEELVGYAETDLLCYHAE 99


>gi|218677541|ref|ZP_03525438.1| ATP12 ATPase [Rhizobium etli CIAT 894]
          Length = 223

 Score = 58.5 bits (140), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 38  ILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNT 97
           + E  G + ++LD + ++TP   +  V +E LA  +AAEW AQ E I   TM +T + NT
Sbjct: 1   VTEHEGSFAVTLDGKTVRTPVRQVLAVPTEALARLVAAEWQAQGEEINPMTMPVTRLVNT 60

Query: 98  VIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +D      K  + ++I+ F  +D I Y A+
Sbjct: 61  ALDGVT-ANKQAIFEDILRFSSSDLICYRAD 90


>gi|417860106|ref|ZP_12505162.1| hypothetical protein Agau_C201320 [Agrobacterium tumefaciens F2]
 gi|338823170|gb|EGP57138.1| hypothetical protein Agau_C201320 [Agrobacterium tumefaciens F2]
          Length = 264

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + E+ +G + I LD + L+TP      V S+ LA  +  EWDAQ E +   
Sbjct: 30  PKRFYKDVTVAEAEDGGFTIFLDGKPLRTPAKKPLIVPSKALAGLLRDEWDAQTEVVNPV 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 90  VMPVSRHVNTAIDGVANDTQA-VFEDILRFSSSDLLCYRAG 129


>gi|395789463|ref|ZP_10468983.1| hypothetical protein ME9_00700 [Bartonella taylorii 8TBB]
 gi|395430006|gb|EJF96058.1| hypothetical protein ME9_00700 [Bartonella taylorii 8TBB]
          Length = 260

 Score = 58.5 bits (140), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 3/115 (2%)

Query: 14  LINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAI 73
           L+  +Q  K+S    PKRFYK+V  L     + I LD   +KTP    F V +   A  +
Sbjct: 17  LVQKMQ--KFSCQSLPKRFYKEVKTLCEEEGFSILLDGCPVKTPARRHFLVPTAAFATLV 74

Query: 74  AAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           A E+++Q + I  S M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 75  AQEFESQKQVIDPSKMPITRLVNTVIDGIADDMQV-VFEDLLRFVACDMIFYRAQ 128


>gi|16126220|ref|NP_420784.1| hypothetical protein CC_1977 [Caulobacter crescentus CB15]
 gi|13423442|gb|AAK23952.1| conserved hypothetical protein [Caulobacter crescentus CB15]
          Length = 241

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 1/109 (0%)

Query: 20  SCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           S K   L KPKRFYK          + I LD R  K+P        ++ L   IAAEW+A
Sbjct: 2   SDKSELLLKPKRFYKSAAAAPVEQGFAIQLDGRTPKSPARKPLVAPTQALGAMIAAEWEA 61

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           Q E I  S M  T +  T ID     T+ ++ + I  +  +D + Y A 
Sbjct: 62  QVEYIDNSLMPATRLAFTAIDRIAE-TRAEVAREITAYAASDHLCYRAE 109


>gi|296444793|ref|ZP_06886756.1| ATP12 ATPase [Methylosinus trichosporium OB3b]
 gi|296257741|gb|EFH04805.1| ATP12 ATPase [Methylosinus trichosporium OB3b]
          Length = 271

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY+   + ES   + + LD + +KTP           L+ A+AAEW  Q E +   T
Sbjct: 34  PKRFYETAEVGESGHGFAVLLDGKSVKTPARRPLATPWRELSTALAAEWAGQGERLDPVT 93

Query: 89  MHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + N+ ID    R+   ++  +I+ +  +D + Y A 
Sbjct: 94  MPLTRLVNSCIDGVAERMD--EVAADIVKYAGSDLVSYRAG 132


>gi|338739361|ref|YP_004676323.1| domain ATP12 chaperone protein [Hyphomicrobium sp. MC1]
 gi|337759924|emb|CCB65755.1| conserved protein of unknown function; putative domain ATP12
           chaperone protein [Hyphomicrobium sp. MC1]
          Length = 267

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           P+RFYK+V + ++   + + LD R +KTP      + +  LA AIA EW AQ E I  + 
Sbjct: 36  PRRFYKEVSVGDT-APFSVLLDGRPIKTPKKRALALPTHELAEAIAEEWRAQGEHINPAH 94

Query: 89  MHLTAICNTVIDNPNRLTKFDLV-QNIINFLDTDTILYHAN 128
           M LT   NT ID        D V  +I  +  TD I Y A 
Sbjct: 95  MPLTRFANTAID--AVADTLDAVADDIAAYAGTDLICYRAE 133


>gi|301118224|ref|XP_002906840.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108189|gb|EEY66241.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 233

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 57/107 (53%), Gaps = 11/107 (10%)

Query: 31  RFYKKVGIL-------ESNGD----YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           RFY  VG+        E+ G+    Y ++LD + +KTP     ++ +  +A A+A EWDA
Sbjct: 38  RFYNDVGVKDVEESVDETGGEPRKLYAVTLDGKTVKTPRQQPVRLPTRAMAYAVAHEWDA 97

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           Q   I+ +TM +  + +T +D     +  + +  ++++L TDT+ Y 
Sbjct: 98  QSHDIRPATMPIMTLASTALDLVFTSSSQETIDEMMHYLHTDTVCYQ 144


>gi|420241478|ref|ZP_14745607.1| chaperone required for the assembly of F1-ATPase, partial
           [Rhizobium sp. CF080]
 gi|398071003|gb|EJL62279.1| chaperone required for the assembly of F1-ATPase, partial
           [Rhizobium sp. CF080]
          Length = 237

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTP--NGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           PKRFYK+V + E  G + I LD R ++TP  NG++   +   LA  I  EW  Q E I  
Sbjct: 4   PKRFYKEVSVAEGEGGHAIHLDGRLVRTPAKNGLVAPTAR--LAELIRDEWANQVEVIDP 61

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             M +T + NT ID    + +  + ++I+ F  +D + Y A 
Sbjct: 62  GNMPVTRLVNTAIDG-IAVDRQAVFEDILRFSSSDLLCYRAE 102


>gi|332560171|ref|ZP_08414493.1| ATP12 ATPase [Rhodobacter sphaeroides WS8N]
 gi|332277883|gb|EGJ23198.1| ATP12 ATPase [Rhodobacter sphaeroides WS8N]
          Length = 235

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+  + E  G + + LD R ++TP      + +  LA A+A+EW AQ   ++  TM
Sbjct: 7   KRFWKEASVAEEPGGFAVLLDGRGVRTPAKRPLILPTRALAEAVASEWQAQEGEVRPETM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            +T   N+ +D      +FD V  ++  +  TD + Y A 
Sbjct: 67  PVTRSANSALDKVA--PQFDEVTEMLAAYGGTDLLCYRAT 104


>gi|398828316|ref|ZP_10586517.1| chaperone required for the assembly of F1-ATPase [Phyllobacterium
           sp. YR531]
 gi|398218351|gb|EJN04861.1| chaperone required for the assembly of F1-ATPase [Phyllobacterium
           sp. YR531]
          Length = 267

 Score = 58.2 bits (139), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 24  SALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           S L  PKRFYK   + E  G + + LD R +KTP      + +   A  IA E+ AQ + 
Sbjct: 31  SKLPLPKRFYKIAAVAEREGQFAVELDGRGVKTPARQNLLLPTHAAAQIIADEFTAQEKE 90

Query: 84  IQRSTMHLTAICNTVID----NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           I  S+M  T + NT ID    +P       ++++++ F  +D + Y A 
Sbjct: 91  IDPSSMPATRLANTAIDGIVNDPQA-----VLEDVLRFASSDMLCYRAG 134


>gi|418296257|ref|ZP_12908101.1| hypothetical protein ATCR1_02000 [Agrobacterium tumefaciens
           CCNWGS0286]
 gi|355539689|gb|EHH08927.1| hypothetical protein ATCR1_02000 [Agrobacterium tumefaciens
           CCNWGS0286]
          Length = 264

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + E   G + I LD + L+TP      V S  LA  +  EWDAQ E +   
Sbjct: 30  PKRFYKDVTVGEVEEGGFTILLDGKPLRTPAKKPLTVPSHALAELLREEWDAQKEVVNPV 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 90  VMPVSRHVNTAIDGVANDTQA-VFEDILRFSSSDLLCYRAG 129


>gi|406923073|gb|EKD60333.1| ATP12 ATPase [uncultured bacterium]
          Length = 235

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K+      +G + + LD R +KTP      + S  +A AIAAEWDAQ   ++  
Sbjct: 5   KAKRFWKQAVAEACDGGFTVKLDGRAVKTPARRALVLPSVAMAQAIAAEWDAQQGLVKPD 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
           TM +T   N+ +D  +   +F  V +++  +  +D + Y A 
Sbjct: 65  TMPVTRAANSALDKVSE--QFAEVADLLAAYGASDLLCYRAT 104


>gi|83593988|ref|YP_427740.1| ATP12 ATPase [Rhodospirillum rubrum ATCC 11170]
 gi|386350740|ref|YP_006048988.1| ATP12 ATPase [Rhodospirillum rubrum F11]
 gi|83576902|gb|ABC23453.1| ATP12 ATPase [Rhodospirillum rubrum ATCC 11170]
 gi|346719176|gb|AEO49191.1| ATP12 ATPase [Rhodospirillum rubrum F11]
          Length = 257

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           +RFY    +  + G + + LD + + TP      V ++ LA A+A EW  Q ETI+  +M
Sbjct: 27  RRFYTTATVGAAEGGFTLLLDGKAVHTPGKRPLVVPTKGLAEAMAGEWAGQGETIEPDSM 86

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + NT ID      +  L ++++ +  +D + Y A 
Sbjct: 87  PLTQLANTAIDR-MAAARPALEEDLLRYGGSDLLCYRAE 124


>gi|407976910|ref|ZP_11157805.1| ATP12 ATPase [Nitratireductor indicus C115]
 gi|407427637|gb|EKF40326.1| ATP12 ATPase [Nitratireductor indicus C115]
          Length = 264

 Score = 57.8 bits (138), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 6/125 (4%)

Query: 4   GKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGI-LESNGDYEISLDHRKLKTPNGVLF 62
           GK    + P  +   QS    AL  PKRFYK V +  E  G + I LD R ++TP     
Sbjct: 11  GKTPAEQDP--VRRAQSTMKRAL--PKRFYKDVSVGEEEEGAFSILLDGRAVRTPGATRV 66

Query: 63  KVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
            + S   A  +A+E+ AQ + I  + M +T + NT ID     T+  +V++++ +  +D 
Sbjct: 67  LLPSRAAAELVASEYAAQGQEIDPAQMPVTRLVNTAIDGVAIHTQ-PVVEDVLRYATSDL 125

Query: 123 ILYHA 127
           + Y A
Sbjct: 126 LCYRA 130


>gi|315500128|ref|YP_004088931.1| atp12 atpase [Asticcacaulis excentricus CB 48]
 gi|315418140|gb|ADU14780.1| ATP12 ATPase [Asticcacaulis excentricus CB 48]
          Length = 247

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 1/102 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KPKRF+K V I      Y ++LD R +KTP G    + +  LA  +  EW+A  ET+  +
Sbjct: 18  KPKRFWKTVEIKADGPGYGVTLDGRAVKTPKGATLVLPNFALAALVGREWEAVEETVDFT 77

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
            M LT +    +D+ +       +     F +TD + Y +++
Sbjct: 78  AMPLTRLGFAALDHMDS-GLEAALAEAARFAETDLVCYPSDY 118


>gi|220926862|ref|YP_002502164.1| ATP12 ATPase [Methylobacterium nodulans ORS 2060]
 gi|219951469|gb|ACL61861.1| ATP12 ATPase [Methylobacterium nodulans ORS 2060]
          Length = 262

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 5/122 (4%)

Query: 8   TMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSE 67
           T + P  + + +     AL  PKRFY + G+  +   + + LD R  +TP   +  V   
Sbjct: 13  TEQNPDPLRAARQASRPAL--PKRFYAEAGVAAAEDGHRLVLDGRPARTPGRRMLAVPQA 70

Query: 68  PLALAIAAEWDAQHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            +A A+A EW AQ E I  + M LT + NT +D   +R  +  + ++I  +  +D + Y 
Sbjct: 71  AVAQALAEEWGAQGEEIDPARMPLTRLVNTALDGVADR--RAAVAEDIAAYAGSDLLAYR 128

Query: 127 AN 128
           A 
Sbjct: 129 AG 130


>gi|338707760|ref|YP_004661961.1| ATP12 ATPase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
 gi|336294564|gb|AEI37671.1| ATP12 ATPase [Zymomonas mobilis subsp. pomaceae ATCC 29192]
          Length = 243

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRFYK+  + ++   + + LD R++ TP      + SEPLA  +A EW AQ   I  +
Sbjct: 2   KRKRFYKEASVEKAKLGFALKLDERQVMTPARNPLILPSEPLAEEVAEEWRAQTHEIDPA 61

Query: 88  TMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M +T   N  ID  P      D +  I  F ++D   Y A+
Sbjct: 62  AMPMTGYANAAIDLVPKNYD--DFILGIRQFAESDVTCYRAD 101


>gi|114570309|ref|YP_756989.1| ATP12 ATPase [Maricaulis maris MCS10]
 gi|114340771|gb|ABI66051.1| ATP12 ATPase [Maricaulis maris MCS10]
          Length = 255

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 3/100 (3%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK V ++  +  + + LD R +K+P      + +  LA  +A+EW+AQ E I   T
Sbjct: 21  PKRFYKAVDVVALDESFAVHLDGRPVKSPAKRTLALPTRALAELVASEWEAQGERINAPT 80

Query: 89  MHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHA 127
           M  T +C   +D  P+   +   V  +  +  TD + + A
Sbjct: 81  MPATRLCFVALDLIPD--ARSATVAEVTKYASTDLVCFRA 118


>gi|319404392|emb|CBI77995.1| conserved hypothetical protein [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 261

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           K S    PKRFY+KV +    G + I LD + LKTP    F +  E LA  +A E+ AQ 
Sbjct: 23  KLSCRPLPKRFYEKVDVTCKEGKFFILLDGKLLKTPAKRDFFLPVEMLAGLVAQEFTAQK 82

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             I  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 83  AVIDPAKMPITRLVNTVIDGIIDNMQI-IFEDLLRFVACDMIFYRAQ 128


>gi|395784155|ref|ZP_10463994.1| hypothetical protein ME3_00650 [Bartonella melophagi K-2C]
 gi|395423910|gb|EJF90098.1| hypothetical protein ME3_00650 [Bartonella melophagi K-2C]
          Length = 260

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           K S    PKRFY++V I    G + I LD   +KTP      + ++ LA  +A E+  Q 
Sbjct: 23  KLSCQPLPKRFYQEVSITHEEGGFSILLDGIPVKTPARRCLLMPTKALAALVAQEFTVQE 82

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           E+I    M +T + NTV+D      +  + ++++ F+  D I Y A 
Sbjct: 83  ESIDPGRMPITRLVNTVVDGIADNMQV-IFEDLLRFVACDMIFYRAQ 128


>gi|356558787|ref|XP_003547684.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Glycine max]
          Length = 326

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 4/101 (3%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFYK+V   E++    + + LD+R LKTP+    K+ S PLA AIAAEW+ Q  + I+ 
Sbjct: 88  KRFYKEVKTREADDGNGWTVMLDYRTLKTPSKRPLKLPSLPLAKAIAAEWEYQQTDGIRP 147

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            TM L  +  T ++    LT+  +++N++   + D +   A
Sbjct: 148 FTMPLMRLACTALER-VPLTRSKVIENLMKKFNQDLVFCRA 187


>gi|85707665|ref|ZP_01038731.1| hypothetical protein NAP1_00480 [Erythrobacter sp. NAP1]
 gi|85689199|gb|EAQ29202.1| hypothetical protein NAP1_00480 [Erythrobacter sp. NAP1]
          Length = 232

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V I  + G ++++LD R ++T  G    V +E LA A+AAEWDAQ E I  +T+
Sbjct: 2   KRFYKEVDIQPALGGWQVTLDGRAIRTQKGAGQIVPTEALARALAAEWDAQGEKIDPATL 61

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            L  + +  +D   P+     D    ++ + DTDT+LY A+
Sbjct: 62  PLRDMADYALDVIAPDPAAVAD---KVLTYGDTDTLLYRAD 99


>gi|392595670|gb|EIW84993.1| ATP12-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
          Length = 287

 Score = 57.4 bits (137), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 56/100 (56%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K VG+      + ++LD R +KTP G  +L   S +  A  IA EW+ Q   ++  
Sbjct: 58  KRFWKTVGVKRQQDGFTVTLDSRPIKTPAGNTLLLPTSKQLAASLIAFEWENQETVLKPH 117

Query: 88  TMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYH 126
            + +T+I +  ID   ++ T  +L  +++++L TDTI + 
Sbjct: 118 ALPMTSIASRAIDFMSDKNTCAELRASLLDYLHTDTICFQ 157


>gi|159478324|ref|XP_001697254.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           a [Chlamydomonas reinhardtii]
 gi|158274728|gb|EDP00509.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           a [Chlamydomonas reinhardtii]
          Length = 276

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 7/111 (6%)

Query: 28  KPKRFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET-I 84
           K  RFYK   ++  E    +++ LD + ++TP   L  + S PLALA+AAEW+ Q +   
Sbjct: 42  KISRFYKAAHVVPAEDRSGFQVMLDRKPVRTPGKKLAVLPSHPLALAVAAEWEWQEKGKP 101

Query: 85  QRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI--LYHANFFLRK 133
           Q  TM + ++    +D P    K  ++ +I+N++ TD    LY      R+
Sbjct: 102 QLHTMPMMSLVAHALDQPRPRDK--VIAHIMNYVHTDAACCLYERGTLARR 150


>gi|347739550|ref|ZP_08870796.1| Chaperone [Azospirillum amazonense Y2]
 gi|346917123|gb|EGX99602.1| Chaperone [Azospirillum amazonense Y2]
          Length = 222

 Score = 57.0 bits (136), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 5/89 (5%)

Query: 41  SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVID 100
           + G +++ LD R LK+P      + +E LA A+AAEWDAQ +T+   +M +  + +T +D
Sbjct: 4   TQGGWQVQLDARILKSPAKADLVLPTEALARAVAAEWDAQGDTVMPDSMPMMQLASTCVD 63

Query: 101 --NPNRLTKFDLVQNIINFLDTDTILYHA 127
              P R T   ++     +  TD + Y A
Sbjct: 64  RVGPQRAT---ILAGAAAYGGTDLLCYRA 89


>gi|356574012|ref|XP_003555147.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Glycine max]
          Length = 278

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFYK++   E++    + + LD+R LKTP+   FK+ S PLA AIAA+W+ Q  + I+ 
Sbjct: 40  KRFYKELKTQEADDGNGWTVMLDYRTLKTPSKRPFKLPSLPLAKAIAAKWEYQQTDGIRP 99

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            TM L  +  T ++    LT+  +++N++   + D +   A
Sbjct: 100 FTMPLMGLACTALERVP-LTRSKVIENLMKKFNQDLVFCRA 139


>gi|397676695|ref|YP_006518233.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 29191]
 gi|395397384|gb|AFN56711.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 29191]
          Length = 234

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRFYKK  + ++   + + LD R++ TP      + +  LA A+A EW+ Q + I  +
Sbjct: 2   KRKRFYKKATVDKAEIGFAVKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKEIDPA 61

Query: 88  TMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +M +T   N  +D  P+R    D V  I  F ++D   Y A+
Sbjct: 62  SMPITGYANAAVDLVPDRYD--DFVAGIRQFAESDVTCYRAD 101


>gi|322709612|gb|EFZ01188.1| ATP12 ATPase family protein [Metarhizium anisopliae ARSEF 23]
          Length = 366

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 17/134 (12%)

Query: 9   MRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVS 65
           ++  ++I + +  K  AL+K  RF+K+V + E +G  ++ LD R L+ P     +   +S
Sbjct: 69  LKQAKVIRNAKDGKTMALQK--RFWKEVSVQEVDGALQVHLDTRPLRHPKTKEVIRLPLS 126

Query: 66  SEPLALAIAAEWDAQHETIQRSTMH---LTAICNTVID--------NPNRLT-KFDLVQN 113
              LA AIA EWD    ++Q +  H   LT++    +D         P   T + D+  +
Sbjct: 127 KPNLAFAIALEWDTMTSSLQATKQHFIPLTSLACRALDIEKDDASSAPGAATIRNDITTS 186

Query: 114 IINFLDTDTILYHA 127
           ++ +LDTD++L  A
Sbjct: 187 VLRYLDTDSLLCWA 200


>gi|56551337|ref|YP_162176.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56542911|gb|AAV89065.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 234

 Score = 57.0 bits (136), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRFYKK  + ++   + + LD R++ TP      + +  LA A+A EW+ Q + I  +
Sbjct: 2   KRKRFYKKATVDKAEIGFAVKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKEIDPA 61

Query: 88  TMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +M +T   N  +D  P+R    D V  I  F ++D   Y A+
Sbjct: 62  SMPITGYANAAVDLVPDRYD--DFVAGIRQFAESDVTCYRAD 101


>gi|395790920|ref|ZP_10470379.1| hypothetical protein MEC_00370 [Bartonella alsatica IBS 382]
 gi|395409216|gb|EJF75815.1| hypothetical protein MEC_00370 [Bartonella alsatica IBS 382]
          Length = 260

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 2/111 (1%)

Query: 16  NSIQSCK-YSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIA 74
           NS+Q  +  S+    KRFYK+V IL     + + LD   +KTP    F V +E  A  +A
Sbjct: 16  NSVQRIQNLSSQTLSKRFYKEVKILCEEKGFSLLLDEYPVKTPAKRHFLVPTEVFATLVA 75

Query: 75  AEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            E+++Q E I  + M +T + NTVID      +  + ++++ F+  D I Y
Sbjct: 76  QEFESQKEVINPAKMPITCLVNTVIDGIADDMQ-AVFEDVLRFVACDMIFY 125


>gi|389749125|gb|EIM90302.1| ATP12-domain-containing protein [Stereum hirsutum FP-91666 SS1]
          Length = 285

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 3/102 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K V + +      ++LD R LKTP+G  +L     + +A  IA+EW+ Q   ++  
Sbjct: 53  KRFWKTVDVEKKGDALTVTLDKRPLKTPSGNQLLVPPHKKLVATLIASEWENQLTLLKPH 112

Query: 88  TMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYHAN 128
            + +T++    ID      ++ ++   ++ +LDTDTI +HA+
Sbjct: 113 ALPMTSLTARAIDAMAEETSRAEVRDTLLKYLDTDTICFHAD 154


>gi|158424143|ref|YP_001525435.1| hypothetical protein AZC_2519 [Azorhizobium caulinodans ORS 571]
 gi|158331032|dbj|BAF88517.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 258

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK+V + E  G +E+ LD R L+TP      V S  LA A+A EW AQ   I   T
Sbjct: 28  PKRFYKEVTVAEGEGGHEVRLDGRTLRTPAKAKLAVPSAALAAALAEEWAAQGVEIDPFT 87

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + N  +D   R  + ++ + I+ ++ +D +LY A 
Sbjct: 88  MPLTRLVNVALDGVARNPQ-EVKEEIVRYMGSDLLLYRAE 126


>gi|77462290|ref|YP_351794.1| hypothetical protein RSP_1746 [Rhodobacter sphaeroides 2.4.1]
 gi|221638144|ref|YP_002524406.1| ATP12 ATPase [Rhodobacter sphaeroides KD131]
 gi|77386708|gb|ABA77893.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|221158925|gb|ACL99904.1| ATP12 ATPase [Rhodobacter sphaeroides KD131]
          Length = 235

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+  + E  G + + LD R ++TP      + +  LA A+A+EW AQ   ++  TM
Sbjct: 7   KRFWKEASVAEEPGGFAVLLDGRGVRTPAKRPLILPTCALAEAVASEWQAQEGEVRPETM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            +T   N+ +D      +FD V  ++  +  TD + Y A 
Sbjct: 67  PVTRSANSALD--KVAPQFDEVTEMLAAYGGTDLLCYRAT 104


>gi|126461166|ref|YP_001042280.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17029]
 gi|126102830|gb|ABN75508.1| ATP12 ATPase [Rhodobacter sphaeroides ATCC 17029]
          Length = 235

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+  + E  G + + LD R ++TP      + +  LA A+A+EW AQ   ++  TM
Sbjct: 7   KRFWKEASVAEEPGGFAVLLDGRGVRTPAKRPLILPTCALAEAVASEWQAQEGEVRPETM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            +T   N+ +D      +FD V  ++  +  TD + Y A 
Sbjct: 67  PVTRSANSALD--KVAPQFDEVTEMLAAYGGTDLLCYRAT 104


>gi|49474372|ref|YP_032414.1| hypothetical protein BQ07910 [Bartonella quintana str. Toulouse]
 gi|49239876|emb|CAF26274.1| hypothetical protein BQ07910 [Bartonella quintana str. Toulouse]
          Length = 261

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 16  NSIQSC-KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIA 74
           NSI+   K S     KRFYK+V I    G + + LD   +KTP    F V +E  A  +A
Sbjct: 17  NSIRKTQKLSCQPLQKRFYKEVKISCEEGGFSVFLDGCSVKTPAKRHFLVPTEVFAAFVA 76

Query: 75  AEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            E+ +Q E I  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 77  QEFKSQKEVIDPTKMPMTRLVNTVIDGIADDMQV-VFEDLLRFVACDMIFYRAQ 129


>gi|403530660|ref|YP_006665189.1| hypothetical protein RM11_0753 [Bartonella quintana RM-11]
 gi|403232731|gb|AFR26474.1| hypothetical protein RM11_0753 [Bartonella quintana RM-11]
          Length = 261

 Score = 56.6 bits (135), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 16  NSIQSC-KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIA 74
           NSI+   K S     KRFYK+V I    G + + LD   +KTP    F V +E  A  +A
Sbjct: 17  NSIRKTQKLSCQPLQKRFYKEVKISCEEGGFSVFLDGCSVKTPAKRHFLVPTEVFAAFVA 76

Query: 75  AEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            E+ +Q E I  + M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 77  QEFKSQKEVIDPTKMPMTRLVNTVIDGIADDMQV-VFEDLLRFVACDMIFYRAQ 129


>gi|348688884|gb|EGZ28698.1| hypothetical protein PHYSODRAFT_248127 [Phytophthora sojae]
          Length = 228

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 11/107 (10%)

Query: 31  RFYKKVGI-------LESNGD----YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           RFYK VG+        E   +    + ++LD + +KTP     ++ +  +A A+A EWDA
Sbjct: 39  RFYKDVGVKDVEEPAAEDGAEPRMLFAVTLDGKTVKTPRQQPVRLPTRAMAYAVAHEWDA 98

Query: 80  QHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           Q   I+ +TM + ++ +T +D     +  + +  ++++L TDT+ Y 
Sbjct: 99  QSHDIRPATMPVMSLASTALDLVFTSSSKETIDEMMHYLHTDTVCYQ 145


>gi|159478326|ref|XP_001697255.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           b [Chlamydomonas reinhardtii]
 gi|158274729|gb|EDP00510.1| assembly factor 2 for F1 mitochondrial ATP synthase, splice variant
           b [Chlamydomonas reinhardtii]
          Length = 289

 Score = 56.6 bits (135), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 5/95 (5%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET-IQRS 87
           RFYK   ++  E    +++ LD + ++TP   L  + S PLALA+AAEW+ Q +   Q  
Sbjct: 45  RFYKAAHVVPAEDRSGFQVMLDRKPVRTPGKKLAVLPSHPLALAVAAEWEWQEKGKPQLH 104

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
           TM + ++    +D P    K  ++ +I+N++ TD 
Sbjct: 105 TMPMMSLVAHALDQPRPRDK--VIAHIMNYVHTDA 137


>gi|319405865|emb|CBI79497.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
          Length = 261

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 9/128 (7%)

Query: 1   MFVGKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGV 60
           + + +  ++R+P      Q   Y  L  PKRFY+KV ++     + I LD R LKTP   
Sbjct: 10  ILLNEGKSLRHP------QELLYRPL--PKRFYEKVNVIFKEEKFFILLDGRLLKTPAKR 61

Query: 61  LFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDT 120
            F V  E LA  +A E+  Q   I    M +T + NTVID      +  + ++++ F+  
Sbjct: 62  DFFVPVETLATLVAQEFVVQKAVIDPVKMPMTRLVNTVIDGIIDNMQI-IFEHLLRFVSC 120

Query: 121 DTILYHAN 128
           D I Y A 
Sbjct: 121 DMIFYRAQ 128


>gi|167645668|ref|YP_001683331.1| ATP12 ATPase [Caulobacter sp. K31]
 gi|167348098|gb|ABZ70833.1| ATP12 ATPase [Caulobacter sp. K31]
          Length = 250

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 1/103 (0%)

Query: 26  LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           L++P+RFYK   +   +G + + LD R  K+P      + S+ LA  +A EW+AQ + I 
Sbjct: 8   LQRPRRFYKAATVGPMDGGFAVLLDGRTPKSPAKAPLVLPSQALADLVAGEWEAQDQVID 67

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            + M  T +  T ID   R T+ ++   +  +  +D + Y A+
Sbjct: 68  STVMPATRLAFTAIDR-IRETRAEVAAEVAAYAGSDLLCYWAD 109


>gi|83950494|ref|ZP_00959227.1| hypothetical protein ISM_05330 [Roseovarius nubinhibens ISM]
 gi|83838393|gb|EAP77689.1| hypothetical protein ISM_05330 [Roseovarius nubinhibens ISM]
          Length = 236

 Score = 56.2 bits (134), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K +RF+K   +  +   + + LD R ++TP      + +E LA  +AAEW AQ E I   
Sbjct: 5   KARRFWKDSSVESAEDGFTVHLDGRPVRTPAKRSLILPTEALAQEVAAEWQAQDEEINPL 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +M  T   N  ID    + K ++ + I  + D+D + Y A+
Sbjct: 65  SMPFTRSANAAIDK-VAVQKDEVAEMIAAYGDSDLLCYRAD 104


>gi|325292803|ref|YP_004278667.1| ATP12 ATPase [Agrobacterium sp. H13-3]
 gi|418406959|ref|ZP_12980278.1| ATP12 ATPase [Agrobacterium tumefaciens 5A]
 gi|325060656|gb|ADY64347.1| ATP12 ATPase [Agrobacterium sp. H13-3]
 gi|358007452|gb|EHJ99775.1| ATP12 ATPase [Agrobacterium tumefaciens 5A]
          Length = 264

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + +  +G + I LD + L+TP      + S+ LA  +  EWDAQ E +   
Sbjct: 30  PKRFYKDVTVADVEDGGFTIHLDGKPLRTPAKKPLVLPSKALADLLRDEWDAQKEVVNPV 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 90  VMPVSRHVNTAIDGIASDTQA-VFEDILRFSSSDLLCYRAG 129


>gi|298707299|emb|CBJ25926.1| similar to ATP synthase mitochondrial F1 complex assembly factor 2
           [Ectocarpus siliculosus]
          Length = 350

 Score = 55.8 bits (133), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 21/133 (15%)

Query: 13  RLINSIQSCKYSALEKPKRFYKKVGILE----SNGD--------------YEISLDHRKL 54
           R ++S     +  ++   RFYK V I E      GD              +EI LD R L
Sbjct: 74  REMSSAPELTHQRIKGRSRFYKTVTIREIVADKAGDEASAAAAVGDKSPRWEILLDSRVL 133

Query: 55  KTPNGVLFKVSSEPLALAIAAEWDAQHET--IQRSTMHLTAICNTVIDNPNRLTKFDLVQ 112
           KTP     +  S  LA+A+AAEWDAQ  +  I+ + M L A+ +T +D      +   V 
Sbjct: 134 KTPGRRPLQFDSPELAMAVAAEWDAQDTSKGIEPAVMPLMALASTALDQ-VASDREKTVA 192

Query: 113 NIINFLDTDTILY 125
             + +L TDT+ +
Sbjct: 193 TCLKYLPTDTVCF 205


>gi|429242044|ref|NP_593355.2| F1-ATPase chaperone Atp12 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|391358125|sp|Q9UT16.2|ATP12_SCHPO RecName: Full=Protein atp12, mitochondrial; Flags: Precursor
 gi|347834081|emb|CAB57430.2| F1-ATPase chaperone Atp12 (predicted) [Schizosaccharomyces pombe]
          Length = 291

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 7/111 (6%)

Query: 24  SALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEWDA 79
           S L +P  +RF+K       NG+  I LD R LK+P+G + KV  E   LA  IA EWD 
Sbjct: 31  SPLPQPSFRRFWKNTATKIQNGEVLIQLDGRNLKSPSGKIVKVPKEMELLAHLIALEWDR 90

Query: 80  QHET-IQRSTMHLTAICNTVIDNPN--RLTKFDLVQNIINFLDTDTILYHA 127
              T +++  + +T++ +  ID     +  K  L   +I FLDTDTIL ++
Sbjct: 91  LPSTSVRQHNLPITSLVSRAIDISQFKKEEKELLSTQLIRFLDTDTILIYS 141


>gi|453330664|dbj|GAC87410.1| putative ATP12 chaperone protein [Gluconobacter thailandicus NBRC
           3255]
          Length = 229

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD--AQHETIQRS 87
           KRF+K V + E +G +   LD R ++ P G +  +SS PLA AI AEW    ++E     
Sbjct: 5   KRFWKSVTLGEQDGLFRPELDGRPIRLPKGAVLALSSRPLAQAIVAEWSRIPENEAFTPE 64

Query: 88  TMHLTAICNTVIDN 101
            + LT I  T+I+ 
Sbjct: 65  QLPLTRIAGTMIER 78


>gi|414341385|ref|YP_006982906.1| hypothetical protein B932_0367 [Gluconobacter oxydans H24]
 gi|411026720|gb|AFV99974.1| hypothetical protein B932_0367 [Gluconobacter oxydans H24]
          Length = 229

 Score = 55.8 bits (133), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD--AQHETIQRS 87
           KRF+K V + E +G +   LD R ++ P G +  +SS PLA AI AEW    ++E     
Sbjct: 5   KRFWKSVTLGEQDGLFRPELDGRPIRLPKGAVLALSSRPLAQAIVAEWSRIPENEAFTPE 64

Query: 88  TMHLTAICNTVIDN 101
            + LT I  T+I+ 
Sbjct: 65  QLPLTRIAGTMIER 78


>gi|335037206|ref|ZP_08530517.1| hypothetical protein AGRO_4525 [Agrobacterium sp. ATCC 31749]
 gi|333791362|gb|EGL62748.1| hypothetical protein AGRO_4525 [Agrobacterium sp. ATCC 31749]
          Length = 264

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + E+  G + I LD + L+TP        S  LA  +  EWDAQ E +   
Sbjct: 30  PKRFYKDVTVGETEEGGFTILLDGKPLRTPAKKPLVAPSRALADLLRDEWDAQKEVVNPV 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 90  VMPVSRHVNTAIDGIASDTQA-VFEDILRFSSSDLLCYRAG 129


>gi|319783353|ref|YP_004142829.1| ATP12 ATPase [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169241|gb|ADV12779.1| ATP12 ATPase [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 262

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFYK   +   +  + + LD + ++TP   L  + +E  A  +A E+ AQ ETI    
Sbjct: 32  PKRFYKAASVTPVDNGFAVHLDGKPVRTPGKALLVLPTEAAAALVADEFAAQSETIDPVK 91

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +  + NT ID      +  ++++I+ F  +D   Y A+
Sbjct: 92  MPVMRLVNTAIDGVASDPQA-VLEDILRFASSDLTCYRAD 130


>gi|418937633|ref|ZP_13491251.1| ATP12 ATPase [Rhizobium sp. PDO1-076]
 gi|375055677|gb|EHS51919.1| ATP12 ATPase [Rhizobium sp. PDO1-076]
          Length = 267

 Score = 55.5 bits (132), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY  V I      + I LD + +KTP      + +   A  +AAEW  Q + I   T
Sbjct: 34  PKRFYTIVSIAADGDGFAIHLDGKPVKTPAKNTLCLPTREAAELVAAEWAFQDQVIDPGT 93

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NT ID  + L   ++   I+ F   D + Y A+
Sbjct: 94  MPVTKLANTAIDAVS-LNLSEVFDEIVRFAGNDLLCYRAD 132


>gi|313237641|emb|CBY12785.1| unnamed protein product [Oikopleura dioica]
          Length = 276

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 33  YKKVGILESNGDYEISLDHRKLKTP-NGVLFKVSSEPLALAIAAEWDAQHE----TIQRS 87
           +K V + E++  YE+ +D RKL+ P    + K+ S  LA  +A EW  Q E     I++ 
Sbjct: 19  FKNVQLSENHEGYEVLIDGRKLRIPRTSNVLKIKSRDLAEIVALEWAGQEERNLAKIKKH 78

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
           ++++T +C    +      K +L+ +++ +L TDT L+ + F
Sbjct: 79  SLYMTQLCYAESELRETTDKAELIDDLLKYLQTDTCLFRSPF 120


>gi|260753044|ref|YP_003225937.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258552407|gb|ACV75353.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 234

 Score = 55.5 bits (132), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRFYKK  + ++   +   LD R++ TP      + +  LA A+A EW+ Q + I  +
Sbjct: 2   KRKRFYKKATVDKAEIGFAAKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKEIDPA 61

Query: 88  TMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +M +T   N  +D  P+R    D V  I  F ++D   Y A+
Sbjct: 62  SMPITGYANAAVDLVPDRYD--DFVAGIRQFAESDVTCYRAD 101


>gi|308812219|ref|XP_003083417.1| F1-ATP synthase assembly protein (ISS) [Ostreococcus tauri]
 gi|116055297|emb|CAL57693.1| F1-ATP synthase assembly protein (ISS) [Ostreococcus tauri]
          Length = 330

 Score = 55.1 bits (131), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 3/96 (3%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           +FY++V +   +++G + ++LD R L+TP    +   ++ LA+AIA EWDAQ + +   T
Sbjct: 96  KFYEEVSVRRDDASGTWRVTLDERLLRTPRRNEYTFGTKALAVAIAMEWDAQTDHVAPFT 155

Query: 89  MHLTAICNTVIDNP-NRLTKFDLVQNIINFLDTDTI 123
           M LT +  T +D+   R T+   V+ ++    TD +
Sbjct: 156 MPLTQLSATALDHMWERETRELHVETLLKHFRTDVV 191


>gi|384411896|ref|YP_005621261.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|335932270|gb|AEH62810.1| ATP12 ATPase [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 234

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRFYKK  + ++   +   LD R++ TP      + +  LA A+A EW+ Q + I  +
Sbjct: 2   KRKRFYKKATVDKAEIGFAAKLDDRQIMTPARHPLILPTRALAEAVAEEWNNQPKEIDLA 61

Query: 88  TMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +M +T   N  +D  P+R    D V  I  F ++D   Y A+
Sbjct: 62  SMPITGYANAAVDLVPDRYD--DFVAGIRQFAESDVTCYRAD 101


>gi|402225421|gb|EJU05482.1| ATP12-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
          Length = 267

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 6/103 (5%)

Query: 30  KRFYKKVGILESNGDYE---ISLDHRKLKTPNGVLFKV-SSEPLALA-IAAEWDAQHETI 84
           KRF+K V +  S  D E   I+LD R LKTP G    V +++PL  A IA EWD+Q   I
Sbjct: 32  KRFWKSVDVSPSKQDPETLAITLDKRPLKTPLGKPLAVPNTKPLLAALIAHEWDSQENVI 91

Query: 85  QRSTMHLTAICNTVIDNPNRLTKFDLVQN-IINFLDTDTILYH 126
           +   + +T++ +  +D  +       V++ ++ + DTDTI +H
Sbjct: 92  KPHALPVTSLASRALDGMHIENVHAQVRDALLKYFDTDTICFH 134


>gi|452002256|gb|EMD94714.1| hypothetical protein COCHEDRAFT_1128410 [Cochliobolus
           heterostrophus C5]
          Length = 367

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 11/109 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD---AQHETI 84
           KRF+K V + E++G  ++ LDHR ++ PN  +  V +S+P LA AIA EWD   +  + +
Sbjct: 96  KRFWKDVSVKETHGGLQVFLDHRPVRMPNKQILTVPASKPQLAAAIALEWDLLMSAQQAL 155

Query: 85  QRSTMHLTAICNTVID--NPNRLTKFDLVQNIINF----LDTDTILYHA 127
           +   + +T++    ID    ++  + D+  +I+ +    L TDT+L  A
Sbjct: 156 KNDYIPMTSLAARAIDIEAADKAGQTDIRNDILAYFMRVLSTDTLLCWA 204


>gi|330916867|ref|XP_003297585.1| hypothetical protein PTT_08045 [Pyrenophora teres f. teres 0-1]
 gi|311329622|gb|EFQ94298.1| hypothetical protein PTT_08045 [Pyrenophora teres f. teres 0-1]
          Length = 365

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 16/121 (13%)

Query: 23  YSALEKPK-----RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAA 75
           YS+  KPK     RF+K V + E NG  +I LDHR ++ PN     V +S+P LA AIA 
Sbjct: 82  YSSSNKPKNMLAKRFWKDVSVNEGNGGLQIFLDHRPVRMPNKQTLTVPASKPQLATAIAL 141

Query: 76  EWD---AQHETIQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTILYH 126
           EWD   +  + ++   + +T++    ID            + D++  ++  L TDT+L  
Sbjct: 142 EWDLLMSAQQALKNDYVPMTSLAARAIDIEAADGEGRDNIRNDILAYLMRVLSTDTLLCW 201

Query: 127 A 127
           A
Sbjct: 202 A 202


>gi|323138144|ref|ZP_08073217.1| ATP12 ATPase [Methylocystis sp. ATCC 49242]
 gi|322396606|gb|EFX99134.1| ATP12 ATPase [Methylocystis sp. ATCC 49242]
          Length = 276

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           P+RFYK V + E+ G Y + LD R + TP      V    LA A+AAEW  Q ETI  +T
Sbjct: 40  PRRFYKTVSVGEAEGGYSVLLDGRPVNTPARRRVVVPPRELAEAMAAEWAEQGETINPAT 99

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + N+ ID   R    ++   ++ +  +D I Y A 
Sbjct: 100 MPLTKLVNSTIDGVARQMA-EVESELVKYAGSDLICYRAG 138


>gi|189209033|ref|XP_001940849.1| F1-ATP synthase assembly protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187976942|gb|EDU43568.1| F1-ATP synthase assembly protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 365

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 16/121 (13%)

Query: 23  YSALEKPK-----RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAA 75
           YS+  KPK     RF+K V + E NG  ++ LDHR ++ PN     V +S+P LA AIA 
Sbjct: 82  YSSSNKPKNMLAKRFWKDVSVQEGNGGLQVFLDHRPVRMPNKQTLTVPTSKPQLATAIAL 141

Query: 76  EWD---AQHETIQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTILYH 126
           EWD   +  + ++   + +T++    ID            + D++   +  L TDT+L  
Sbjct: 142 EWDLLMSAQQALKNDYIPMTSLAARAIDIEAADGEGRDNVRNDILAYFMRVLSTDTLLCW 201

Query: 127 A 127
           A
Sbjct: 202 A 202


>gi|85715099|ref|ZP_01046083.1| Chaperone required for the assembly of F1-ATPase [Nitrobacter sp.
           Nb-311A]
 gi|85698014|gb|EAQ35887.1| Chaperone required for the assembly of F1-ATPase [Nitrobacter sp.
           Nb-311A]
          Length = 260

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 7/125 (5%)

Query: 4   GKQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFK 63
           GK    R     NS +S +       +RFY    + E+   + I LD + ++TP+  +  
Sbjct: 9   GKAAPDREGTARNSARSGQR------QRFYACASVKETPEGFAILLDDKPVRTPSRNVLA 62

Query: 64  VSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
             +  +A AIA EWDAQ + I   TM LT + N+VID         +V++I  +L+TD +
Sbjct: 63  APARAIAEAIAVEWDAQRDVINPMTMPLTRLANSVIDGVAGRVDV-VVEDIAKYLETDLL 121

Query: 124 LYHAN 128
            Y A 
Sbjct: 122 FYRAG 126


>gi|361124356|gb|EHK96456.1| putative protein atp12, mitochondrial [Glarea lozoyensis 74030]
          Length = 279

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 11/108 (10%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVS-SEP-LALAIAAEWD---AQHETIQ 85
           RF+K V + E  G  +I LD R L+ PN  +  +  S+P LA AIA EWD   +  + ++
Sbjct: 91  RFWKDVHVKEVEGGLQIHLDTRPLRRPNKEILTIPKSKPHLATAIALEWDLLVSAQQALR 150

Query: 86  RSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTILYHA 127
              + +T++ +  +D      +PN   +  ++ +++ +LDTD++L  A
Sbjct: 151 HHLIPMTSLVSRALDIIDDDASPNPSIRDSIITSLLRYLDTDSLLCWA 198


>gi|219130755|ref|XP_002185523.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403054|gb|EEC43010.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 390

 Score = 54.7 bits (130), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 1/92 (1%)

Query: 45  YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNR 104
           + ++LD R L+TP G    V S  LA  IAAEW+AQ   I  + M L  +  T +D  +R
Sbjct: 148 HGVTLDGRVLRTPLGQPLSVPSVTLATMIAAEWNAQTPYIVPTQMPLMTLACTALDQTSR 207

Query: 105 LTKFDLVQNIINFLDTDTILYHANFFLRKGVF 136
             +    +  +NF+ TDTI Y  +    +G++
Sbjct: 208 QMR-TYQETSLNFVGTDTICYWEDPMEDRGLY 238


>gi|15888797|ref|NP_354478.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
 gi|15156553|gb|AAK87263.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
          Length = 264

 Score = 54.3 bits (129), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + +   G + I LD + L+TP        S  LA  +  EWDAQ E +   
Sbjct: 30  PKRFYKDVTVADVEEGGFTILLDGKPLRTPAKKPLVAPSRALADLLRDEWDAQKEVVNPV 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 90  VMPVSRHVNTAIDGIASDTQA-VFEDILRFSSSDLLCYRAG 129


>gi|408785245|ref|ZP_11196992.1| hypothetical protein C241_02479 [Rhizobium lupini HPC(L)]
 gi|408488839|gb|EKJ97146.1| hypothetical protein C241_02479 [Rhizobium lupini HPC(L)]
          Length = 264

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + E+  + + I LD + L+TP      V S  LA  +  EWDAQ E +   
Sbjct: 30  PKRFYKDVTVGEAAEEGFTILLDGKPLRTPAKKPLVVPSRSLAELLRDEWDAQTEAVNPV 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 90  VMPVSRHVNTAIDGVANDTQA-VFEDILRFSSSDLLCYRAG 129


>gi|424910329|ref|ZP_18333706.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
 gi|392846360|gb|EJA98882.1| chaperone required for the assembly of F1-ATPase [Rhizobium
           leguminosarum bv. viciae USDA 2370]
          Length = 264

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILESNGD-YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + E+  + + I LD + L+TP      V S  LA  +  EWDAQ E +   
Sbjct: 30  PKRFYKDVTVGEAAEEGFTILLDGKPLRTPAKKPLVVPSRSLAELLRDEWDAQTEVVNPV 89

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 90  VMPVSRHVNTAIDGVANDTQA-VFEDILRFSSSDLLCYRAG 129


>gi|328868042|gb|EGG16422.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dictyostelium fasciculatum]
          Length = 395

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           ++YK VG    +  G Y  +LD+R +KTP G  F + ++ LA+A+AAEW  Q   I+ S 
Sbjct: 146 KWYKHVGYTYDQEKGGYVPTLDNRAMKTPCGNHFVLPTKELAMAVAAEWHTQTTYIKPSR 205

Query: 89  MHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTI 123
           + L++   T +D  P +  +   +  I+  L TD +
Sbjct: 206 LPLSSALATCVDLTPEQ--RLKSITEIVGHLKTDPV 239


>gi|330804137|ref|XP_003290055.1| hypothetical protein DICPUDRAFT_154531 [Dictyostelium purpureum]
 gi|325079855|gb|EGC33436.1| hypothetical protein DICPUDRAFT_154531 [Dictyostelium purpureum]
          Length = 318

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 5/94 (5%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           R+YK  G    E  G Y  ++D R++KTPN +L  V S+ +AL+IAAEW AQ + I+ + 
Sbjct: 81  RWYKTTGYTYDEELGGYLPTIDDRRIKTPNDILVVVPSKEIALSIAAEWAAQEKYIRPAR 140

Query: 89  MHLTAICNTVID-NPNRLTKFDLVQNIINFLDTD 121
           + +T    T ++  P    K  ++   +N L TD
Sbjct: 141 LPITQTIITCLEIRPEGREK--VIGEFLNHLATD 172


>gi|296811660|ref|XP_002846168.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
 gi|238843556|gb|EEQ33218.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
          Length = 358

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 13/124 (10%)

Query: 15  INSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALA 72
           ++S ++ K S L K  RF+K V + E+ G ++I LD R ++TP   +  V +S+P +A A
Sbjct: 72  VSSSRASKPSPLRK--RFWKDVHVKEAAGGHQIYLDSRPVRTPEKKILTVPASKPHVAHA 129

Query: 73  IAAEWD----AQHETIQR--STMHLTAICNTVIDNPNR---LTKFDLVQNIINFLDTDTI 123
           IA EWD    AQH T         LT     + D  +R     + ++ + ++ +L+TDT+
Sbjct: 130 IALEWDLLKTAQHATKYHLIPMTSLTGRAEDIADEDSRGVTTIRDEITRVMLRYLETDTL 189

Query: 124 LYHA 127
           L  A
Sbjct: 190 LSWA 193


>gi|118488474|gb|ABK96051.1| unknown [Populus trichocarpa]
          Length = 330

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFYK+V   E++    + + LD+R LKTP+    K+ +  LA AIAAEWD Q  + I+ 
Sbjct: 93  KRFYKQVTTREADDGNGWNVMLDYRTLKTPSKRPLKLPTLALAKAIAAEWDYQQTDGIRP 152

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA--NFFLRKGVF 136
            TM L  +  T +D    LT+  ++++++     D +   A  +  L  GV+
Sbjct: 153 FTMPLMKLACTALDR-VPLTRPKIIEHLMKKFSQDLVFCRAPEDNVLTSGVY 203


>gi|340992603|gb|EGS23158.1| NONE-like protein [Chaetomium thermophilum var. thermophilum DSM
           1495]
          Length = 403

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 15/109 (13%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWD----AQHE 82
           KRF+K V + E NG YEI LD R L+ P+    +   +S   LA ++A EWD    AQH 
Sbjct: 112 KRFWKDVHVREVNGAYEIHLDTRPLRHPHTKSVIRLPLSKPNLAHSLAVEWDSLLSAQHA 171

Query: 83  TIQRSTMHLTAICNTVID------NPNRLT-KFDLVQNIINFLDTDTIL 124
           T Q   + LTA+    +D      +P   T +  ++  ++ +LDTD++L
Sbjct: 172 TKQH-LIPLTALTCRALDIAADDASPAGPTIRPQVISLLLRYLDTDSLL 219


>gi|401885779|gb|EJT49867.1| hypothetical protein A1Q1_01019 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 232

 Score = 53.9 bits (128), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 3/80 (3%)

Query: 47  ISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQHETIQRSTMHLTAICNTVIDN-PN 103
           ++LDHR LKTP G    +  E   LA+ IAAEW+ Q + +++  + LT++ +  +D   +
Sbjct: 55  VTLDHRNLKTPEGAKMVIPKERQLLAMMIAAEWENQDQVLKQYALPLTSLASRALDGMKD 114

Query: 104 RLTKFDLVQNIINFLDTDTI 123
              K  ++  ++ +LDTDTI
Sbjct: 115 PKIKEGVIDALLAYLDTDTI 134


>gi|384261686|ref|YP_005416872.1| ATP12 ATPase [Rhodospirillum photometricum DSM 122]
 gi|378402786|emb|CCG07902.1| ATP12 ATPase [Rhodospirillum photometricum DSM 122]
          Length = 293

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           +RFYK VG+ E      + LD R ++TP      V +  LA A+AAEW AQ E+I  +TM
Sbjct: 62  RRFYKSVGVTEGPEGAGVLLDGRAVRTPGRAGLVVPTLALAEALAAEWAAQGESIDPATM 121

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
            LTA+ NT +D   P R    D    ++ +  TD + Y A+
Sbjct: 122 PLTALANTALDRVAPERSAILD---TLVRYGGTDLLCYRAD 159


>gi|395787558|ref|ZP_10467157.1| hypothetical protein ME7_00492 [Bartonella birtlesii LL-WM9]
 gi|395411073|gb|EJF77608.1| hypothetical protein ME7_00492 [Bartonella birtlesii LL-WM9]
          Length = 260

 Score = 53.5 bits (127), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY++V I    G + + LD   +KTP    F + +E  A  IA E+  Q   I  + 
Sbjct: 30  PKRFYREVTIACEKGGFSLLLDGCPIKTPAKRHFLLPTEAFAKFIAQEFTNQKRVIDPAK 89

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 90  MPMTRLVNTVIDGIADDMQV-VFEDLLRFVACDMIFYRAQ 128


>gi|297801514|ref|XP_002868641.1| hypothetical protein ARALYDRAFT_493916 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314477|gb|EFH44900.1| hypothetical protein ARALYDRAFT_493916 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 328

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 6/102 (5%)

Query: 30  KRFYKKVGILES---NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ-HETIQ 85
           KRFYKKV   E+   NG + + LD+R LKTP+    K+ S  LA AIAAEW+ Q  E I+
Sbjct: 90  KRFYKKVTTREADDGNG-WTVMLDYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIR 148

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
             TM L  +  T ++    LT+  +++++   L  D + + A
Sbjct: 149 PFTMPLMRLACTALERVP-LTRSKIIEHLSRKLHQDLVFFRA 189


>gi|224060183|ref|XP_002300073.1| predicted protein [Populus trichocarpa]
 gi|222847331|gb|EEE84878.1| predicted protein [Populus trichocarpa]
          Length = 270

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 6/112 (5%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFYK+V   E++    + + LD+R LKTP+    K+ +  LA AIAAEWD Q  + I+ 
Sbjct: 33  KRFYKQVTTREADDGNGWNVMLDYRTLKTPSKRPLKLPTLALAKAIAAEWDYQQTDGIRP 92

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA--NFFLRKGVF 136
            TM L  +  T +D    LT+  ++++++     D +   A  +  L  GV+
Sbjct: 93  FTMPLMKLACTALDRVP-LTRPKIIEHLMKKFSQDLVFCRAPEDNVLTSGVY 143


>gi|339504822|ref|YP_004692242.1| ATP12 chaperone protein [Roseobacter litoralis Och 149]
 gi|338758815|gb|AEI95279.1| ATP12 chaperone protein [Roseobacter litoralis Och 149]
          Length = 236

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K KRF+K   + E+   + ISLD R +KTP        +   A  IA EW+AQ E I   
Sbjct: 5   KAKRFWKAAAVDETAEGFGISLDGRPVKTPAKRSLIAPTRQFAERIANEWNAQGEVIDPG 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHANF 129
            M  T   N  +D      + D V +++  + D+D + Y A +
Sbjct: 65  AMPFTRSANAALDKVA--VQHDEVADMLAAYGDSDLLCYRAEY 105


>gi|294951335|ref|XP_002786929.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239901519|gb|EER18725.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 247

 Score = 53.5 bits (127), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 11/103 (10%)

Query: 30  KRFYKKVGI----LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           KRFY  V +    +E  G + + LD ++L TP      + SE LA A+A EW  Q + I+
Sbjct: 22  KRFYDVVKVARNGIEEGGGWTVLLDGKRLSTPAKHRLALPSEGLAFAVAEEWAEQDKFIR 81

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDL---VQNIINFLDTDTILY 125
              M L A+  T ID    LT  D+   V+  +++L+TD   Y
Sbjct: 82  PHFMPLMALAATTID----LTAKDMSTVVERNLHYLNTDLTCY 120


>gi|259485527|tpe|CBF82624.1| TPA: mitochondrial molecular chaperone (Atp12), putative
           (AFU_orthologue; AFUA_7G02490) [Aspergillus nidulans
           FGSC A4]
          Length = 369

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 19/114 (16%)

Query: 30  KRFYKKVGILESNG-DYEISLDHRKLKTPNGVLFKVSS--EPLALAIAAEWD---AQHET 83
           KRF+K V + + +G DY++ LD R ++TP+  +  + S  + LA AIA EWD   A  + 
Sbjct: 89  KRFWKDVDVKQKDGGDYQVLLDKRPVRTPSKSVLSIPSTKQHLAQAIALEWDVMNAAQQA 148

Query: 84  IQRSTMHLTAICNTVID-------------NPNRLTKFDLVQNIINFLDTDTIL 124
           ++  T+ LT++     D                R+ +  +V+  + +L+TDT+L
Sbjct: 149 LKNHTIPLTSLTARAADIAQEDAAGAGAGAGVERVIRTQIVKTAMRYLETDTLL 202


>gi|67904150|ref|XP_682331.1| hypothetical protein AN9062.2 [Aspergillus nidulans FGSC A4]
 gi|40742705|gb|EAA61895.1| hypothetical protein AN9062.2 [Aspergillus nidulans FGSC A4]
          Length = 366

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 19/114 (16%)

Query: 30  KRFYKKVGILESNG-DYEISLDHRKLKTPNGVLFKVSS--EPLALAIAAEWD---AQHET 83
           KRF+K V + + +G DY++ LD R ++TP+  +  + S  + LA AIA EWD   A  + 
Sbjct: 86  KRFWKDVDVKQKDGGDYQVLLDKRPVRTPSKSVLSIPSTKQHLAQAIALEWDVMNAAQQA 145

Query: 84  IQRSTMHLTAICNTVID-------------NPNRLTKFDLVQNIINFLDTDTIL 124
           ++  T+ LT++     D                R+ +  +V+  + +L+TDT+L
Sbjct: 146 LKNHTIPLTSLTARAADIAQEDAAGAGAGAGVERVIRTQIVKTAMRYLETDTLL 199


>gi|119177617|ref|XP_001240562.1| hypothetical protein CIMG_07725 [Coccidioides immitis RS]
 gi|392867472|gb|EAS29294.2| mitochondrial molecular chaperone [Coccidioides immitis RS]
          Length = 369

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 13/110 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVS-SEP-LALAIAAEWDAQHETIQRS 87
           KRF+K V + E+   Y++ LD R ++TP   +  +  S+P LA AIA EWD Q  + Q++
Sbjct: 93  KRFWKDVHVKEAAEGYQVLLDSRPIRTPAKTILNIPRSKPHLAHAIALEWD-QLVSAQQA 151

Query: 88  TMH-------LTAICNTVIDNPNR---LTKFDLVQNIINFLDTDTILYHA 127
             H       LTA    ++   +R     + ++++ ++ +LDTDT+L  A
Sbjct: 152 LRHHLIPLTSLTARAEDIVQQDSRGESTIRNEIMRTLMRYLDTDTLLSWA 201


>gi|398826075|ref|ZP_10584342.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. YR681]
 gi|398222007|gb|EJN08398.1| chaperone required for the assembly of F1-ATPase [Bradyrhizobium
           sp. YR681]
          Length = 264

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+ G+ E+ G + I+LD + ++TP+G    + S  LA A+AAEW AQ ETI   TM
Sbjct: 30  KRFYKEAGVTEAEGGFAITLDGKPIRTPSGRQVIIPSRALAAAVAAEWAAQGETIDPMTM 89

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT I N+V++      +  + +++  + ++D + Y A 
Sbjct: 90  ALTRIANSVVEGVVGRVEL-VAEDLAKYFESDLLFYRAG 127


>gi|320032048|gb|EFW14004.1| F1-ATP synthase assembly protein [Coccidioides posadasii str.
           Silveira]
          Length = 369

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 61/110 (55%), Gaps = 13/110 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVS-SEP-LALAIAAEWDAQHETIQRS 87
           KRF+K V + E+   Y++ LD R ++TP   +  +  S+P LA AIA EWD Q  + Q++
Sbjct: 93  KRFWKDVHVKEAAEGYQVLLDSRPIRTPAKTILNIPRSKPHLAHAIALEWD-QLVSAQQA 151

Query: 88  TMH-------LTAICNTVIDNPNR---LTKFDLVQNIINFLDTDTILYHA 127
             H       LTA    ++   +R     + ++++ ++ +LDTDT+L  A
Sbjct: 152 LRHHLIPLTSLTARAEDIVQQDSRGESTIRNEIMRTLMRYLDTDTLLSWA 201


>gi|164658950|ref|XP_001730600.1| hypothetical protein MGL_2396 [Malassezia globosa CBS 7966]
 gi|159104496|gb|EDP43386.1| hypothetical protein MGL_2396 [Malassezia globosa CBS 7966]
          Length = 317

 Score = 53.1 bits (126), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 56/106 (52%), Gaps = 9/106 (8%)

Query: 30  KRFYKKVGI---LESNGDYE---ISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQH 81
           +RF+K V +     +NGD E   + LD R L+TP G    + ++   LA  IA EWD Q 
Sbjct: 58  ERFWKDVFLGYEAPTNGDDEHFVVQLDRRNLRTPQGAKLAIPADRPLLACLIAQEWDEQT 117

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKFDLVQN-IINFLDTDTILYH 126
           + ++  ++ LT++ +  ID          VQ+ ++ + DTD + +H
Sbjct: 118 KVVKPHSLPLTSLMSRAIDALQDEQGHKDVQDYLMRYFDTDAVCFH 163


>gi|85373093|ref|YP_457155.1| chaperone [Erythrobacter litoralis HTCC2594]
 gi|84786176|gb|ABC62358.1| chaperone [Erythrobacter litoralis HTCC2594]
          Length = 232

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           K+F+K+V + + +G Y+++LD R ++T       V +  LA  +A EW AQ + I  ++ 
Sbjct: 2   KKFWKEVSVEQVDGGYQVALDGRGIRTQGKRPQIVQTAALAELLADEWRAQGKDIDPASF 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
               + +  ID        D+   +I F++TDT+ Y A+
Sbjct: 62  PHRDMADYAIDRIATAAD-DIPAKLIGFMETDTLCYRAD 99


>gi|322701445|gb|EFY93195.1| ATP12 ATPase family protein [Metarhizium acridum CQMa 102]
          Length = 366

 Score = 53.1 bits (126), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 17/134 (12%)

Query: 9   MRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVS 65
           ++  ++I + +  K +AL K  RF+K+V + E +G  +I LD R L+ P     +   +S
Sbjct: 69  LKQAKVIRNAKDGKTTALRK--RFWKEVSVQEVDGALQIHLDARPLRHPQTKEVIRLPLS 126

Query: 66  SEPLALAIAAEWDAQHETIQRSTMH---LTAICNTVID--------NPNRLT-KFDLVQN 113
              LA AIA EWD    ++Q +  H   LT++    +D         P     + ++  +
Sbjct: 127 KPNLAFAIALEWDTLTSSLQATKQHFIPLTSLVCRALDIERDDASSAPGAAKIRNEITTS 186

Query: 114 IINFLDTDTILYHA 127
           ++ +LDTD++L  A
Sbjct: 187 VLRYLDTDSLLCWA 200


>gi|393220475|gb|EJD05961.1| ATP12-domain-containing protein [Fomitiporia mediterranea MF3/22]
          Length = 280

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG-VLFKVSSEPLALA-IAAEWDAQHETIQRS 87
           KRF+K VGI   +    ++LD R LKTP+G +L     + LA A IA EW+ Q + ++  
Sbjct: 52  KRFWKTVGIDTRSDGIAVTLDRRALKTPSGNILILPHEKRLAAALIANEWENQDKVLKPH 111

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            + + A    +     R T+ ++   ++ +L+TDTI +H +
Sbjct: 112 ALPM-ATSRAIDAFRERQTREEVTAALLKYLETDTICFHED 151


>gi|294929692|ref|XP_002779329.1| DNA-directed RNA polymerase I, putative [Perkinsus marinus ATCC
           50983]
 gi|239888392|gb|EER11124.1| DNA-directed RNA polymerase I, putative [Perkinsus marinus ATCC
           50983]
          Length = 408

 Score = 52.8 bits (125), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 11/103 (10%)

Query: 30  KRFYKKVGI----LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           KRFY  V +    ++  G + + LD ++L TP      + SE LA A+A EW  Q + I+
Sbjct: 22  KRFYDVVKVARNGIDEGGGWTVLLDGKRLSTPAKHRLALPSEGLAFAVAEEWAEQDKFIR 81

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDL---VQNIINFLDTDTILY 125
              M L A+  T ID    LT  D+   V+  +++L+TD   Y
Sbjct: 82  PHFMPLMALAATTID----LTAKDMSAVVERNLHYLNTDLTCY 120


>gi|440802968|gb|ELR23882.1| ATP synthase mitochondrial F1 complex assembly factor 2, putative
           [Acanthamoeba castellanii str. Neff]
          Length = 181

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 22/118 (18%)

Query: 18  IQSCKYSALE---KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPL---AL 71
           ++  K S ++   K +R+YK+V + E  G +   LD R + TP          PL   AL
Sbjct: 61  VKGAKLSGVQGGSKTRRWYKQVSVGEREGGWAPLLDGRVILTP-------MEHPLVHNAL 113

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLT------KFDLVQNIINFLDTDTI 123
            IAAEW+ Q   I+  TM +T +  T++D   RL       +  L   ++++++TDTI
Sbjct: 114 MIAAEWEMQQPYIKPDTMPITRLATTIMD---RLVEGKPEIRHALTLEMLDYIETDTI 168


>gi|21592835|gb|AAM64785.1| unknown [Arabidopsis thaliana]
          Length = 325

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 6/102 (5%)

Query: 30  KRFYKKVGILES---NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ-HETIQ 85
           KRFYKKV   E+   NG + + LD+R LKTP+    K+ S  LA AIAAEW+ Q  E I+
Sbjct: 87  KRFYKKVTTREADDGNG-WTVMLDYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIR 145

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
             TM L  +  T ++    LT+  +++++   +  D + + A
Sbjct: 146 PFTMPLMRLACTALERVP-LTRSKIIEHLSRKIHQDLVFFRA 186


>gi|9758094|dbj|BAB08538.1| unnamed protein product [Arabidopsis thaliana]
          Length = 322

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 6/102 (5%)

Query: 30  KRFYKKVGILES---NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ-HETIQ 85
           KRFYKKV   E+   NG + + LD+R LKTP+    K+ S  LA AIAAEW+ Q  E I+
Sbjct: 84  KRFYKKVTTREADDGNG-WTVMLDYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIR 142

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
             TM L  +  T ++    LT+  +++++   +  D + + A
Sbjct: 143 PFTMPLMRLACTALERVP-LTRSKIIEHLSRKIHQDLVFFRA 183


>gi|15237466|ref|NP_198882.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Arabidopsis thaliana]
 gi|14517426|gb|AAK62603.1| AT5g40660/MNF13_180 [Arabidopsis thaliana]
 gi|22655442|gb|AAM98313.1| At5g40660/MNF13_180 [Arabidopsis thaliana]
 gi|332007196|gb|AED94579.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Arabidopsis thaliana]
          Length = 325

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 6/102 (5%)

Query: 30  KRFYKKVGILES---NGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ-HETIQ 85
           KRFYKKV   E+   NG + + LD+R LKTP+    K+ S  LA AIAAEW+ Q  E I+
Sbjct: 87  KRFYKKVTTREADDGNG-WTVMLDYRTLKTPSKRPLKLRSLALAKAIAAEWEYQLTEGIR 145

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
             TM L  +  T ++    LT+  +++++   +  D + + A
Sbjct: 146 PFTMPLMRLACTALERVP-LTRSKIIEHLSRKIHQDLVFFRA 186


>gi|399077418|ref|ZP_10752396.1| chaperone required for the assembly of F1-ATPase [Caulobacter sp.
           AP07]
 gi|398035487|gb|EJL28728.1| chaperone required for the assembly of F1-ATPase [Caulobacter sp.
           AP07]
          Length = 241

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 26  LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           L +P+RFYK        G + + LD R  K+P      + ++ LA  +A EW+AQ E I 
Sbjct: 8   LHRPRRFYKAATTAPHEGGFAVLLDGRTPKSPAKAPLVLPTQALAQLVADEWEAQVEVID 67

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            + M  T +  T ID   R T+ ++   +  +  +D + Y A+
Sbjct: 68  STAMPATRLAFTAIDR-IRETRAEVAAEVAAYAGSDLLCYWAD 109


>gi|451845335|gb|EMD58648.1| hypothetical protein COCSADRAFT_41759 [Cochliobolus sativus ND90Pr]
          Length = 367

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 11/109 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD---AQHETI 84
           KRF+K V + E++G  ++ LDHR ++ PN  +  V +S+P LA AIA EWD   +  + +
Sbjct: 96  KRFWKDVSVKETDGGLQVFLDHRPVRMPNKQILTVPASKPQLAAAIALEWDLLMSAQQAL 155

Query: 85  QRSTMHLTAICNTVID--NPNRLTKFDLVQNIINF----LDTDTILYHA 127
           +   + +T++    ID    ++  + ++  +I+ +    L TDT+L  A
Sbjct: 156 KNDYIPMTSLAARAIDIEAADKAGQSNIRNDILAYFMRVLATDTLLCWA 204


>gi|367042328|ref|XP_003651544.1| hypothetical protein THITE_2064808 [Thielavia terrestris NRRL 8126]
 gi|346998806|gb|AEO65208.1| hypothetical protein THITE_2064808 [Thielavia terrestris NRRL 8126]
          Length = 330

 Score = 52.8 bits (125), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 7/102 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPN--GVLFKVSSEP-LALAIAAEWDAQHETIQR 86
           +RF+K V + E NG  EI LD R L+ P    ++    S+P LA A+A EWD+     Q 
Sbjct: 41  RRFWKDVHVREVNGALEIHLDTRPLRHPTTKSIIRLPPSKPHLAHALALEWDSLTSASQA 100

Query: 87  STMHL----TAICNTVIDNPNRLTKFDLVQNIINFLDTDTIL 124
           +  H+    + +C  +    +   +  + Q ++ +LDTD++L
Sbjct: 101 TKQHMIPLTSLVCRALDLTADASLRPGVAQTLLRYLDTDSLL 142


>gi|302382667|ref|YP_003818490.1| ATP12 ATPase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193295|gb|ADL00867.1| ATP12 ATPase [Brevundimonas subvibrioides ATCC 15264]
          Length = 252

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 1/102 (0%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           E+ KRF+K   +      + + LD R  KTP      + +E  A  +A EW AQ E I+ 
Sbjct: 22  ERLKRFWKDASVAPDGEGHVVLLDGRAPKTPAHARMVLPTEAAARLVADEWAAQGEFIEP 81

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            TM  T +  T ID  ++ T+  +   I +++ +D + Y A 
Sbjct: 82  GTMPATRLAATAIDRVSQ-TREPVADEIASYVGSDLLCYLAE 122


>gi|409046448|gb|EKM55928.1| hypothetical protein PHACADRAFT_209438 [Phanerochaete carnosa
           HHB-10118-sp]
          Length = 296

 Score = 52.4 bits (124), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 22/121 (18%)

Query: 30  KRFYKKVGIL-----------------ESNGDYEISLDHRKLKTPNG-VLFKVSSEPLAL 71
           KRF+K VGI                   S     ++LD R LKTP+G  L     + LA+
Sbjct: 43  KRFWKDVGIEVQPGLSAASTSTTPASDASKNHLTVTLDKRPLKTPSGDQLLLPKHKALAV 102

Query: 72  A-IAAEWDAQHETIQRSTMHLTAICNTVID---NPNRLTKFDLVQNIINFLDTDTILYHA 127
             IAAEWD Q   +++ ++ +T++ +  ID   N    T+  +   ++ + +TD I +HA
Sbjct: 103 TLIAAEWDNQETLLKQHSLPMTSLASRAIDAFRNSKADTRVQVYDQLLKYFETDAICFHA 162

Query: 128 N 128
           +
Sbjct: 163 S 163


>gi|294085987|ref|YP_003552747.1| chaperone [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292665562|gb|ADE40663.1| Chaperone [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 232

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 26  LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           ++  KRFYK V  +E++  ++I+LD R +KTP G    + +  LA AIAAEWDAQ + I+
Sbjct: 1   MQMRKRFYKDVRAIEADTGWQIALDGRAVKTPAGSQLCMPTAALASAIAAEWDAQDDDIK 60

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
            ++M L A   T  D      +  ++  I ++   D + Y
Sbjct: 61  PASMPLFAYAVTACDRVAS-QRAAVIAEITSYGGNDLLCY 99


>gi|358053753|dbj|GAB00061.1| hypothetical protein E5Q_06763 [Mixia osmundae IAM 14324]
          Length = 299

 Score = 52.4 bits (124), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 8/103 (7%)

Query: 30  KRFYKKVGI-LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEWDAQHETIQR 86
           KRF+K V +    +G   + LD R LKT + V   +    LA A  IA EWD Q + ++ 
Sbjct: 63  KRFWKDVRLDPRPDGHIAVLLDKRTLKTTSNVPLLLPRRNLAAALLIANEWDNQDKVLKP 122

Query: 87  STMHLTAICNTVIDN---PNRLTKFDLVQNIINFLDTDTILYH 126
            ++ +T++ +  ID    P +  + ++ Q ++ +LDTDTI +H
Sbjct: 123 HSLPITSLASRAIDGMSTPEQ--RKEIGQGLLKYLDTDTICFH 163


>gi|395765213|ref|ZP_10445829.1| hypothetical protein MCO_01111 [Bartonella sp. DB5-6]
 gi|395413066|gb|EJF79545.1| hypothetical protein MCO_01111 [Bartonella sp. DB5-6]
          Length = 260

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V  L     + I LD   +KTP    F V +E  A  +A E+++Q + I  + M
Sbjct: 31  KRFYKEVKTLCEEEGFSILLDGCPVKTPARRHFLVPTEAFATLVAQEFESQKQVIDPAKM 90

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +T + NTVID      +  + ++++ F+  D + Y A 
Sbjct: 91  PVTRLVNTVIDGIADDMQV-VFEDLLRFVACDMMFYRAQ 128


>gi|357030715|ref|ZP_09092659.1| hypothetical protein GMO_03590 [Gluconobacter morbifer G707]
 gi|356415409|gb|EHH69052.1| hypothetical protein GMO_03590 [Gluconobacter morbifer G707]
          Length = 226

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD--AQHETIQRS 87
           KRF+K V + E++G ++  LD R ++ P G +  V +  LA  IAAEW   A+  +    
Sbjct: 3   KRFWKTVSVEEADGRFQPVLDGRPIRLPQGHVLSVPTRALAQGIAAEWGRIAEGASFTPD 62

Query: 88  TMHLTAICNTVID 100
           ++ LT I  T+++
Sbjct: 63  SLPLTRIAGTMVE 75


>gi|281210418|gb|EFA84584.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Polysphondylium pallidum PN500]
          Length = 342

 Score = 52.0 bits (123), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 31  RFYKKVGI---LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           R+YK VG     E+NG Y   LD+R +KT N  LF V ++ +A+AIA EW  Q + I   
Sbjct: 102 RWYKHVGYTFDAENNG-YLPLLDNRPMKTVNRKLFIVPTKEIAMAIATEWMVQGKYIMPH 160

Query: 88  TMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTI 123
            + LT +  T ID NP    K   +  +I  L TD +
Sbjct: 161 RLPLTTVAATCIDMNPESRQK--CIDELIGHLATDQV 195


>gi|412988621|emb|CCO17957.1| ATP12 ATPase [Bathycoccus prasinos]
          Length = 421

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 5/96 (5%)

Query: 31  RFYKKVGILE---SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           ++Y+ V I E   +   YEI LD + LK+P    F + ++ LA AIA EW  Q + + R 
Sbjct: 170 KYYENVDIREVSSTQNQYEILLDGKPLKSPKRAQFILPNKLLASAIATEWATQEDDLIRP 229

Query: 88  -TMHLTAICNTVIDNPNRLTKFDL-VQNIINFLDTD 121
            TM L  + +T +D+ +    FD  V+ ++ F D D
Sbjct: 230 FTMPLMQLSSTALDHMSDYATFDFHVKKLLEFFDAD 265


>gi|145482517|ref|XP_001427281.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394361|emb|CAK59883.1| unnamed protein product [Paramecium tetraurelia]
          Length = 266

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 9/107 (8%)

Query: 30  KRFYKKVGI-LESNG-----DYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           KRFYK+  I + +N       + + LD + +KTP+     V S  LA  IA E++ Q E 
Sbjct: 23  KRFYKEATIEMATNPTNPYHQWLVKLDGKTVKTPSKNTLAVPSPQLASFIAHEFNMQTEY 82

Query: 84  IQRSTMHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           I+ +TM L  +    ID    +R+ +F + Q+II++L+ DT+L+  N
Sbjct: 83  IRPTTMPLLTLARNAIDIEADDRIRQF-MEQSIISYLERDTVLFREN 128


>gi|428182376|gb|EKX51237.1| hypothetical protein GUITHDRAFT_103155 [Guillardia theta CCMP2712]
          Length = 255

 Score = 52.0 bits (123), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 10/85 (11%)

Query: 30  KRFYKKVGILESNGD----------YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA 79
           KRFYK+ G+ +   D          + ++LD R ++TP   L  V ++ +A+AIA E+D 
Sbjct: 23  KRFYKQAGVQQVKQDCPRTGMLRTMWSLTLDGRGVRTPANKLLTVPTKDMAMAIAMEFDV 82

Query: 80  QHETIQRSTMHLTAICNTVIDNPNR 104
           Q   I   TM LT +  T ID  +R
Sbjct: 83  QDLNILPYTMPLTTLATTSIDQISR 107


>gi|49475762|ref|YP_033803.1| hypothetical protein BH10180 [Bartonella henselae str. Houston-1]
 gi|49238569|emb|CAF27809.1| hypothetical protein BH10180 [Bartonella henselae str. Houston-1]
          Length = 260

 Score = 52.0 bits (123), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY++V I    G + + LD   +KTP    F + +E  A  +A E++ Q + I  + M
Sbjct: 31  KRFYREVKISCEEGGFSVLLDGCPVKTPAKRHFCLPTEVFAAFVAEEFENQKQVIDPAKM 90

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
            +T + NTVID    N    F   ++++ F+  D I Y A 
Sbjct: 91  PMTRLVNTVIDGIADNMQAVF---EDLLRFVACDMIFYRAQ 128


>gi|326481290|gb|EGE05300.1| ATP12 chaperone protein [Trichophyton equinum CBS 127.97]
          Length = 339

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 13/110 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD----AQHET 83
           KRF+K V + E+ G ++I LD R ++TP   +  V SS+P LA AIA EWD    AQH T
Sbjct: 65  KRFWKDVHVKEAAGGHQIYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDLLKTAQHAT 124

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKF------DLVQNIINFLDTDTILYHA 127
            +   + +T+I     D      K       ++ + ++ +L+TDT+L  A
Sbjct: 125 -KYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWA 173


>gi|302822509|ref|XP_002992912.1| hypothetical protein SELMODRAFT_187108 [Selaginella moellendorffii]
 gi|300139257|gb|EFJ06001.1| hypothetical protein SELMODRAFT_187108 [Selaginella moellendorffii]
          Length = 285

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 31  RFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET-IQRST 88
           RFYK   +  S+ G Y + LD   LKTP      V +  LALAIAAEW+ Q ++ I+  T
Sbjct: 54  RFYKHARMRPSDDGHYVVMLDRFTLKTPKKNPVSVPTPGLALAIAAEWEWQTKSGIRPFT 113

Query: 89  MHLTAICNTVIDNPNRLTKF--DLVQNIINFLDTDTILYHA 127
           M L  +  T ID   RL  F  ++++N++ +   D++   A
Sbjct: 114 MPLMKLAATTID---RLPDFRENVIENLLKYSHADSVYCRA 151


>gi|302796769|ref|XP_002980146.1| hypothetical protein SELMODRAFT_111970 [Selaginella moellendorffii]
 gi|300152373|gb|EFJ19016.1| hypothetical protein SELMODRAFT_111970 [Selaginella moellendorffii]
          Length = 285

 Score = 51.6 bits (122), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 7/101 (6%)

Query: 31  RFYKKVGILESN-GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET-IQRST 88
           RFYK   +  S+ G Y + LD   LKTP      V +  LALAIAAEW+ Q ++ I+  T
Sbjct: 54  RFYKHARMRPSDDGHYVVMLDRFTLKTPKKNPVSVPTPGLALAIAAEWEWQTKSGIRPFT 113

Query: 89  MHLTAICNTVIDNPNRLTKF--DLVQNIINFLDTDTILYHA 127
           M L  +  T ID   RL  F  ++++N++ +   D++   A
Sbjct: 114 MPLMKLAATTID---RLPDFRENVIENLLKYSHADSVYCRA 151


>gi|302664719|ref|XP_003023986.1| hypothetical protein TRV_01848 [Trichophyton verrucosum HKI 0517]
 gi|291188011|gb|EFE43368.1| hypothetical protein TRV_01848 [Trichophyton verrucosum HKI 0517]
          Length = 339

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 13/110 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD----AQHET 83
           KRF+K V + E+ G ++I LD R ++TP   +  V SS+P LA AIA EWD    AQH T
Sbjct: 65  KRFWKDVHVKEAAGGHQIYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDLLKTAQHAT 124

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKF------DLVQNIINFLDTDTILYHA 127
            +   + +T+I     D      K       ++ + ++ +L+TDT+L  A
Sbjct: 125 -KYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWA 173


>gi|182678297|ref|YP_001832443.1| ATP12 ATPase [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182634180|gb|ACB94954.1| ATP12 ATPase [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 273

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY++       G + ++LD +  KTP      + +   A A+AAEW+AQ + I  S 
Sbjct: 37  PKRFYREARAEPVEGGFALTLDGKPAKTPARQDLVLPTLAAAEALAAEWNAQEDIIDPSA 96

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + N+ ID   R    + V+ I  +  +D + Y A 
Sbjct: 97  MPLTRLANSAIDG-VRAALMETVEEIARYGGSDLVCYRAE 135


>gi|261205222|ref|XP_002627348.1| mitochondrial molecular chaperone [Ajellomyces dermatitidis
           SLH14081]
 gi|239592407|gb|EEQ74988.1| mitochondrial molecular chaperone [Ajellomyces dermatitidis
           SLH14081]
 gi|239611434|gb|EEQ88421.1| ATP12 chaperone [Ajellomyces dermatitidis ER-3]
 gi|327348556|gb|EGE77413.1| ATP12 chaperone [Ajellomyces dermatitidis ATCC 18188]
          Length = 384

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 14/128 (10%)

Query: 14  LINSIQSCKYSALE-KP--KRFYKKVGILESNGDYEISLDHRKLKTPN-GVLFKVSSEP- 68
           ++ S Q    +A E KP  +RF+K V + E +  Y+I LD R ++TP   +L   +S+P 
Sbjct: 82  IVASGQGSSTTATESKPLRRRFWKDVHVKEVDDGYQIFLDSRPVRTPEKKILIIPASKPH 141

Query: 69  LALAIAAEWD---AQHETIQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLD 119
           LA AIA EWD   +  + +++  + LT++   V D            +  +V +++ +L+
Sbjct: 142 LAHAIALEWDLLVSAQQALKQHLIPLTSLTARVQDLAAEDAAGQSTIREQIVASMMRYLE 201

Query: 120 TDTILYHA 127
           TDT+L  A
Sbjct: 202 TDTLLSWA 209


>gi|302511597|ref|XP_003017750.1| hypothetical protein ARB_04633 [Arthroderma benhamiae CBS 112371]
 gi|291181321|gb|EFE37105.1| hypothetical protein ARB_04633 [Arthroderma benhamiae CBS 112371]
          Length = 339

 Score = 51.6 bits (122), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 13/110 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD----AQHET 83
           KRF+K V + E+ G ++I LD R ++TP   +  V SS+P LA AIA EWD    AQH T
Sbjct: 65  KRFWKDVHVKEAAGGHQIYLDSRPVRTPEKKVLTVPSSKPHLAHAIALEWDLLKTAQHAT 124

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKF------DLVQNIINFLDTDTILYHA 127
            +   + +T+I     D      K       ++ + ++ +L+TDT+L  A
Sbjct: 125 -KYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWA 173


>gi|449455898|ref|XP_004145687.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cucumis sativus]
 gi|449492905|ref|XP_004159136.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Cucumis sativus]
          Length = 330

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 57/101 (56%), Gaps = 4/101 (3%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFY+KV   E++    + + LD+R LKTP     K+ +  LA A+AAEW+ Q  + I+ 
Sbjct: 92  KRFYQKVTTREADDRNGWAVMLDYRTLKTPTKRPLKLPTLGLAKAVAAEWEYQETDGIRP 151

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            TM L  +  T ++    LT+  +++++I   ++D +   A
Sbjct: 152 FTMPLMKLACTALERVP-LTRHTIIEHLIKKFNSDLVFCRA 191


>gi|121602261|ref|YP_989030.1| ATP12 chaperone family protein [Bartonella bacilliformis KC583]
 gi|421760834|ref|ZP_16197647.1| ATP12 chaperone family protein [Bartonella bacilliformis INS]
 gi|120614438|gb|ABM45039.1| ATP12 chaperone family protein [Bartonella bacilliformis KC583]
 gi|411174150|gb|EKS44184.1| ATP12 chaperone family protein [Bartonella bacilliformis INS]
          Length = 261

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V I+       I LD R + TP      V +E LA  +A E+  Q + I  + M
Sbjct: 31  KRFYKDVSIVREERGVSILLDGRPITTPAKRHIFVPTEALAALVAQEFKIQEKVIDPAKM 90

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +T + NTVID      +  + ++++ F+  D I Y A 
Sbjct: 91  PITRLINTVIDGIADNMQV-IFEDLLRFVACDMIFYRAQ 128


>gi|347529828|ref|YP_004836576.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium sp. SYK-6]
 gi|345138510|dbj|BAK68119.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Sphingobium sp. SYK-6]
          Length = 232

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 9/103 (8%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+   +     + I LD R ++TP   L  V    +A AIAAEWDAQ E I   TM
Sbjct: 2   KRFWKEAQAVADGEGWAIRLDGRPVRTPARALLVVPHAAMAQAIAAEWDAQGEEIDPRTM 61

Query: 90  HLTAICNTVID----NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +T   N  ID     P           +  + ++D + Y A+
Sbjct: 62  PMTGFANATIDRVLTGPGAFRG-----QVAAYAESDLLCYRAD 99


>gi|358385001|gb|EHK22598.1| hypothetical protein TRIVIDRAFT_28258 [Trichoderma virens Gv29-8]
          Length = 364

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 17/134 (12%)

Query: 9   MRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVS 65
           ++  + + S Q  K  A+ K  RF+K+V + E +G  ++ LD R L+ PN    +   +S
Sbjct: 66  LKSAKEVRSAQDGKSGAVAK--RFWKEVTVREVDGALQVHLDARPLRHPNTKAIIRLPLS 123

Query: 66  SEPLALAIAAEWDAQHETIQRSTMHL----TAICNT--VID----NPNRLTKF--DLVQN 113
              LA A+A EWD      Q +  HL    + IC    ++D    N    TK    +   
Sbjct: 124 KPNLASALALEWDILTSAQQATKQHLIPLTSLICRALDILDDDASNGPEATKIRTTITNT 183

Query: 114 IINFLDTDTILYHA 127
           ++ +LDTD++L  A
Sbjct: 184 VLRYLDTDSLLCWA 197


>gi|145547238|ref|XP_001459301.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427125|emb|CAK91904.1| unnamed protein product [Paramecium tetraurelia]
          Length = 266

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 9/107 (8%)

Query: 30  KRFYKKVGI-LESNG-----DYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           KRFYK+  I + +N       + + LD + +KTP+     V S  LA  IA E++ Q E 
Sbjct: 23  KRFYKEATIEMATNPTNPYHQWLVKLDGKTVKTPSKNTLAVPSPQLASFIAHEFNMQTEF 82

Query: 84  IQRSTMHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
           I+ +TM L  +    ID    +R+ +F + Q++I++L+ DT+L+  N
Sbjct: 83  IRPTTMPLLTLARNAIDIEADDRIRQF-MEQSVISYLERDTVLFREN 128


>gi|258564100|ref|XP_002582795.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237908302|gb|EEP82703.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 369

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 13/110 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVS-SEP-LALAIAAEWDAQHETIQRS 87
           KRF+K V + E    Y++ LD R ++TP   +  +  S+P LA AIA EWD Q  + Q++
Sbjct: 93  KRFWKDVHVKEVPEGYQVLLDSRPIRTPAKTILTIPRSKPHLAHAIALEWD-QLVSAQQA 151

Query: 88  TMH-------LTAICNTVIDNPNR---LTKFDLVQNIINFLDTDTILYHA 127
             H       L A    +I+  +R     + ++++ ++ +LDTDT+L  A
Sbjct: 152 LKHHLIPLTSLAARAEDIIEQDSRNETTIRNEILRTLMRYLDTDTLLSWA 201


>gi|440634712|gb|ELR04631.1| hypothetical protein GMDG_06913 [Geomyces destructans 20631-21]
          Length = 381

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 18/117 (15%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLAL--AIAAEWD---AQHE 82
           K KRF+K V + +++  ++I LD R L+TP   +  V+   L L  AIA EWD   +  +
Sbjct: 97  KTKRFWKDVNVKKTDDGHQIFLDTRPLRTPTKQILSVAHTKLHLAHAIALEWDLLVSAQQ 156

Query: 83  TIQRSTMHLTAICNTVID------------NPNRLTKFDLVQNIINFLDTDTILYHA 127
            ++   + LT++ +  +D            NPN L +  + + ++ +LDTD++L  A
Sbjct: 157 ALRHHLIPLTSLTSRALDIAEEDKKPSSASNPNGL-RNTITETLMRYLDTDSLLCWA 212


>gi|163796884|ref|ZP_02190841.1| chaperone [alpha proteobacterium BAL199]
 gi|159177873|gb|EDP62422.1| chaperone [alpha proteobacterium BAL199]
          Length = 236

 Score = 51.2 bits (121), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 3/101 (2%)

Query: 30  KRFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KR YK V +   ++   + + LD R + +P      +    LA AIAAEWD Q ETI   
Sbjct: 4   KRIYKTVAVATADAGAGFTVLLDSRPVGSPGQRPIILPGRVLADAIAAEWDGQGETIDVY 63

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +M +     TVID       + +V  +  +  +D + Y A+
Sbjct: 64  SMPMMGFAATVIDRVAPQRDY-VVGEVAGYGGSDLLCYLAD 103


>gi|145245671|ref|XP_001395100.1| ATP12 chaperone protein [Aspergillus niger CBS 513.88]
 gi|134079807|emb|CAK40941.1| unnamed protein product [Aspergillus niger]
 gi|350637639|gb|EHA25996.1| hypothetical protein ASPNIDRAFT_203208 [Aspergillus niger ATCC
           1015]
          Length = 364

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 12/107 (11%)

Query: 30  KRFYKKVGI-LESNGDYEISLDHRKLKTPN-GVLFKVSSEP-LALAIAAEWDAQHETIQR 86
           KRF+K V +  +S+GDY++ LD R ++TP+  VL   S++P LA AIA EWD      Q 
Sbjct: 87  KRFWKNVDVKRKSDGDYQVLLDTRPIRTPSKDVLSIPSTKPYLAHAIALEWDVMTTAQQA 146

Query: 87  STMH------LTAICNTVIDNPNR---LTKFDLVQNIINFLDTDTIL 124
              H      LTA    +     R    T+  +V+  + +L+TDT+L
Sbjct: 147 LKNHLIPLTSLTARAADIAAEDARGETTTRDQIVKTAMRYLETDTLL 193


>gi|389646655|ref|XP_003720959.1| ATP12 chaperone [Magnaporthe oryzae 70-15]
 gi|86196490|gb|EAQ71128.1| hypothetical protein MGCH7_ch7g535 [Magnaporthe oryzae 70-15]
 gi|351638351|gb|EHA46216.1| ATP12 chaperone [Magnaporthe oryzae 70-15]
 gi|440472214|gb|ELQ41090.1| ATP12 chaperone protein [Magnaporthe oryzae Y34]
 gi|440482176|gb|ELQ62691.1| ATP12 chaperone protein [Magnaporthe oryzae P131]
          Length = 365

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 15/124 (12%)

Query: 16  NSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALA 72
            S  + + S L++  RF++   + E +G YE+ LD R L+ P     V   +S   LA A
Sbjct: 87  GSGAAARASGLKR--RFWRDCHVREVDGAYEVHLDTRGLRHPTTKEIVRIPLSKPQLAYA 144

Query: 73  IAAEWDAQHETIQRST-MHLTAICNTVIDNPNRLT--------KFDLVQNIINFLDTDTI 123
           +A EWD Q E+ Q++T  HL  + + V    +           +  ++  ++ +LDTDT+
Sbjct: 145 LAVEWD-QLESAQQATKQHLIPLTSLVCRAIDLAADDAAGGSIRTSIIDTVLRYLDTDTL 203

Query: 124 LYHA 127
           L  A
Sbjct: 204 LCWA 207


>gi|326476012|gb|EGE00022.1| mitochondrial molecular chaperone [Trichophyton tonsurans CBS
           112818]
          Length = 339

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 13/110 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD----AQHET 83
           KRF+K V + E+ G + I LD R ++TP   +  V SS+P LA AIA EWD    AQH T
Sbjct: 65  KRFWKDVHVKEAAGGHHIYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDLLKTAQHAT 124

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKF------DLVQNIINFLDTDTILYHA 127
            +   + +T+I     D      K       ++ + ++ +L+TDT+L  A
Sbjct: 125 -KYHLIPMTSITGRAEDIAAEDAKGVTTIRDEITRVMLRYLETDTLLSWA 173


>gi|383642666|ref|ZP_09955072.1| ATP12 ATPase [Sphingomonas elodea ATCC 31461]
          Length = 225

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K V +     D  I LD R ++TP      + +  LA A+A EW +  E +   TM
Sbjct: 2   KRFWKTVAM----ADGVIELDGRPVRTPARAPLALPTPQLAEAVAEEWRSVGEELDPRTM 57

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHANF 129
            LT + N  ID   PN         ++  + ++D + Y A  
Sbjct: 58  PLTGLANAAIDQVAPN---PAPFAADLARYGESDLLCYRAEM 96


>gi|340519597|gb|EGR49835.1| predicted protein [Trichoderma reesei QM6a]
          Length = 364

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 17/134 (12%)

Query: 9   MRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVS 65
           ++  R I S Q  K   + +  RF+K+V + E +G  ++ LD R L+ PN    +   +S
Sbjct: 66  LKTAREIRSAQEGKSETVAR--RFWKEVTVREVDGALQVHLDARPLRHPNTKAIIRLPLS 123

Query: 66  SEPLALAIAAEWDAQHETIQRSTMHLTAICNTVI--------DNPNRLT----KFDLVQN 113
              LA A+A EWD      Q +  HL  + + V         D  NR      +  +   
Sbjct: 124 KPNLASALALEWDILTSAQQATKQHLIPLTSLVCRALDILEDDASNRPEAAKIRTAITNT 183

Query: 114 IINFLDTDTILYHA 127
           ++ +LDTD++L  A
Sbjct: 184 VLRYLDTDSLLCWA 197


>gi|87200854|ref|YP_498111.1| ATP12 ATPase [Novosphingobium aromaticivorans DSM 12444]
 gi|87136535|gb|ABD27277.1| ATP12 ATPase [Novosphingobium aromaticivorans DSM 12444]
          Length = 230

 Score = 50.8 bits (120), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V +  + G + + LD R ++T       V +  LA A+AAEW  Q E I     
Sbjct: 2   KRFYKQVTVEAAEGGFAVKLDGRAIRTVGKRTQVVPTHALAEAMAAEWAGQGEEIDPQAF 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
               + +  ID   +     ++  ++ + +TDT+ Y A 
Sbjct: 62  LFRDMADYAIDVVAQ-DPASVIGELLPYAETDTLCYRAE 99


>gi|340028920|ref|ZP_08664983.1| ATP12 ATPase [Paracoccus sp. TRP]
          Length = 236

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           K +RF+K V + +  G + + LD R L+TP      + +  LA AIA EW    + I   
Sbjct: 5   KARRFWKSVNLRKEAGGWTVLLDERPLRTPGKQPLILPAGALAEAIAEEWQTVEDVINPQ 64

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            M LT   N+ I+    + +F  V  ++  +  TD + Y A+
Sbjct: 65  DMPLTRAANSAIE--KVIPQFAQVAAMLAEYGGTDLLSYRAD 104


>gi|357622890|gb|EHJ74250.1| putative ATP synthase mitochondrial F1 complex assembly factor 2
           [Danaus plexippus]
          Length = 185

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 30/40 (75%)

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           MHLTA+CNT IDNP +L   D+   +++F+ TDT+L+++ 
Sbjct: 1   MHLTALCNTAIDNPGKLNCHDITSYLLDFIATDTLLFYSE 40


>gi|254438539|ref|ZP_05052033.1| ATP12 chaperone protein [Octadecabacter antarcticus 307]
 gi|198253985|gb|EDY78299.1| ATP12 chaperone protein [Octadecabacter antarcticus 307]
          Length = 240

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 38/71 (53%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+  V ++E++G + + LD R +KTP      + +  +A A+A EW    E I  + M
Sbjct: 7   KRFWTDVTVIETDGGFAVQLDSRLVKTPAKAALVLPTRAMADAVAGEWRLVVEKIDPNVM 66

Query: 90  HLTAICNTVID 100
            +T   N  ID
Sbjct: 67  PVTRSANAAID 77


>gi|388852802|emb|CCF53487.1| related to ATP12-F1F0-ATPase complex assembly protein [Ustilago
           hordei]
          Length = 273

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 14/140 (10%)

Query: 1   MFVGKQTTMRYPRLINSIQSCKYSALEKP--------KRFYKKVGI---LESNGDYEISL 49
           MF  +QT +R  R + +  S   +  E           RF+K V +      +  ++I L
Sbjct: 1   MFAARQTLLRTSRALRAFSSSSCTLEEATLNRAERLKSRFWKSVSLQRPTSCSDGFQILL 60

Query: 50  DHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTK 107
           D+R ++TP+G  ++     E LA  IA EW  Q + ++  T+ LT++    ++      +
Sbjct: 61  DNRCIRTPSGQPIVIPKERELLATCIAQEWSEQKQLLKPHTLPLTSLAARALEGCRHAGE 120

Query: 108 FDLVQN-IINFLDTDTILYH 126
              ++  +I +L+ +T+ + 
Sbjct: 121 RKAIEGALIRYLENETVCFQ 140


>gi|212546095|ref|XP_002153201.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           marneffei ATCC 18224]
 gi|210064721|gb|EEA18816.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           marneffei ATCC 18224]
          Length = 383

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 15/124 (12%)

Query: 13  RLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEP--LA 70
           R    +   K S L+K  RF+K V + ES   Y+I LD R +++P   +  V S    LA
Sbjct: 90  RTATPVSQAKTSPLKK--RFWKDVDVKESADGYQILLDTRPVRSPTKTILTVPSNKRHLA 147

Query: 71  LAIAAEWD---AQHETIQRSTMHLTAICNTVID-------NPNRLTKFDLVQNIINFLDT 120
            AI+ EWD   +  + +++  + LT++     D         NR+ + ++ +  + +L+T
Sbjct: 148 EAISLEWDLLTSAQQALKQHLIPLTSLTTRAADIVREDELGQNRI-RQEIARTAMRYLET 206

Query: 121 DTIL 124
           DT+L
Sbjct: 207 DTLL 210


>gi|158430644|pdb|2R6I|A Chain A, Crystal Structure Of Atu1473 Protein, A Putative Chaperone
           From Agrobacterium Tumefaciens
 gi|158430645|pdb|2R6I|B Chain B, Crystal Structure Of Atu1473 Protein, A Putative Chaperone
           From Agrobacterium Tumefaciens
          Length = 284

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK V + +   G + I LD + L+TP        S  LA  +  EWDAQ E +   
Sbjct: 51  PKRFYKDVTVADVEEGGFTILLDGKPLRTPAKKPLVAPSRALADLLRDEWDAQKEVVNPV 110

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
              ++   NT ID     T+  + ++I+ F  +D + Y A 
Sbjct: 111 VXPVSRHVNTAIDGIASDTQA-VFEDILRFSSSDLLCYRAG 150


>gi|303315877|ref|XP_003067943.1| ATP12 ATPase family protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240107619|gb|EER25798.1| ATP12 ATPase family protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 377

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 21/118 (17%)

Query: 30  KRFYKKVGILESNGD--------YEISLDHRKLKTPNGVLFKVS-SEP-LALAIAAEWDA 79
           KRF+K V + E+ G+        Y++ LD R ++TP   +  +  S+P LA AIA EWD 
Sbjct: 93  KRFWKDVHVKEAAGEANSITLKGYQVLLDSRPIRTPAKTILNIPRSKPHLAHAIALEWD- 151

Query: 80  QHETIQRSTMH-------LTAICNTVIDNPNR---LTKFDLVQNIINFLDTDTILYHA 127
           Q  + Q++  H       LTA    ++   +R     + ++++ ++ +LDTDT+L  A
Sbjct: 152 QLVSAQQALRHHLIPLTSLTARAEDIVQQDSRGESTIRNEIMRTLMRYLDTDTLLSWA 209


>gi|425772967|gb|EKV11346.1| Oxysterol binding protein (Osh1), putative [Penicillium digitatum
           Pd1]
 gi|425778667|gb|EKV16775.1| Oxysterol binding protein (Osh1), putative [Penicillium digitatum
           PHI26]
          Length = 1577

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 11/106 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTP-NGVLFKVSSEP-LALAIAAEWDAQHETIQRS 87
           KRF+K V +   + +Y+I LD R ++TP   VL   S++P LA A+A EWD      Q  
Sbjct: 86  KRFWKDVHVHGKSDEYQILLDKRPVRTPAKEVLSIPSTKPHLAYAVALEWDVMASAQQAL 145

Query: 88  TMHL---TAICNTVID------NPNRLTKFDLVQNIINFLDTDTIL 124
             HL   T++     D        N  T+  ++   + +LDTDT+L
Sbjct: 146 KSHLIPMTSLAARATDIAREDAEGNGTTRKQIITTAMRYLDTDTLL 191


>gi|225562557|gb|EEH10836.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Ajellomyces capsulatus G186AR]
          Length = 372

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 13/125 (10%)

Query: 16  NSIQSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LAL 71
           N   S + SA  KP  +RF+K V + E +  Y+I LD R ++TP   +  + +S+P LA 
Sbjct: 78  NVTDSGQGSASSKPLKRRFWKDVHVKEVDDGYQIFLDSRAVRTPAKKILTIPASKPHLAH 137

Query: 72  AIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNII---------NFLDTDT 122
           AIA EWD      Q    HL  + +      + + +    QN I          +LDTDT
Sbjct: 138 AIALEWDLLVSAQQALKQHLIPLTSLTARAQDIVVEDAAGQNTIRNQITKATMRYLDTDT 197

Query: 123 ILYHA 127
           +L  A
Sbjct: 198 LLSWA 202


>gi|238498972|ref|XP_002380721.1| ATP12 protein, putative [Aspergillus flavus NRRL3357]
 gi|220693995|gb|EED50340.1| ATP12 protein, putative [Aspergillus flavus NRRL3357]
          Length = 781

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 12/107 (11%)

Query: 30  KRFYKKVGI-LESNGDYEISLDHRKLKTPN-GVLFKVSSEP-LALAIAAEWD---AQHET 83
           KRF+K V + ++  GDY++ LD R ++TP   VL+   ++P LA  IA EWD   +  + 
Sbjct: 83  KRFWKSVDVRIKPEGDYQVLLDTRPVRTPTKDVLYIPPTKPHLAHLIALEWDVMTSAQQA 142

Query: 84  IQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTIL 124
           ++   + LT++     D      N    T+  +V+  + +L+TDT+L
Sbjct: 143 LKNHMIPLTSLAARAADIVREDANGETTTRDQIVKTAMRYLETDTLL 189


>gi|358393486|gb|EHK42887.1| hypothetical protein TRIATDRAFT_34313 [Trichoderma atroviride IMI
           206040]
          Length = 372

 Score = 50.4 bits (119), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 17/129 (13%)

Query: 15  INSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLAL 71
           I S Q  K S     +RF+K+VG+ E +G  ++ LD R L+ P+    +   +S   LA 
Sbjct: 78  IRSAQEGKASPGAA-RRFWKEVGVREIDGALQVYLDARPLRHPHTKEIIRVPLSKPNLAS 136

Query: 72  AIAAEWDAQHETIQRSTMHLTA----ICNT--VIDN------PNRLT-KFDLVQNIINFL 118
           A+A EWD      Q +  HL      +C    ++D+      P     +  + Q ++ +L
Sbjct: 137 ALAVEWDILTSPQQATKQHLIPLTGLVCRALDILDDDAAPSIPESAKIRHGIAQTVLRYL 196

Query: 119 DTDTILYHA 127
           DTD++L  A
Sbjct: 197 DTDSLLCWA 205


>gi|400600741|gb|EJP68409.1| ATP12 chaperone [Beauveria bassiana ARSEF 2860]
          Length = 381

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 13/111 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWD---AQHET 83
           +RF+K V + E +G  ++ LD R L+ PN    V   +S   LA A+A EWD   +  + 
Sbjct: 104 RRFWKDVRVKEVDGALQVLLDARPLRHPNNKEIVRVPLSKPTLATALAIEWDLLTSAQQA 163

Query: 84  IQRSTMHLTAICNTVIDNP------NRLT-KFDLVQNIINFLDTDTILYHA 127
            Q+  + LT++    ID        +R T +  + ++++ +LDTD++L  A
Sbjct: 164 TQQHLIPLTSLVCRAIDVAADDALGDRATVRAAIAESVMRYLDTDSLLCWA 214


>gi|240281011|gb|EER44514.1| ATP synthase F1 complex assembly factor 2 [Ajellomyces capsulatus
           H143]
 gi|325092493|gb|EGC45803.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Ajellomyces capsulatus H88]
          Length = 371

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 13/125 (10%)

Query: 16  NSIQSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LAL 71
           N   S + SA  KP  +RF+K V + E +  Y+I LD R ++TP   +  + +S+P LA 
Sbjct: 78  NVADSGRGSASSKPLKRRFWKDVHVKEVDDGYQIFLDSRAVRTPAKKILTIPASKPHLAH 137

Query: 72  AIAAEWD---AQHETIQRSTMHLTAICN-----TVIDNPNRLT-KFDLVQNIINFLDTDT 122
           AIA EWD   +  + +++  + LT++        V D   + T +  + +  + +LDTDT
Sbjct: 138 AIALEWDLLVSAQQALKQHLIPLTSLTARAQDIAVEDAAGQNTIRNQITKATMRYLDTDT 197

Query: 123 ILYHA 127
           +L  A
Sbjct: 198 LLSWA 202


>gi|407778991|ref|ZP_11126251.1| ATP12 ATPase [Nitratireductor pacificus pht-3B]
 gi|407299275|gb|EKF18407.1| ATP12 ATPase [Nitratireductor pacificus pht-3B]
          Length = 261

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY    + E    + + LD R ++TP      + +   A  +A E+  Q E I  +T
Sbjct: 32  PKRFYGAASVGEEGDAFTVLLDGRMVRTPGAATVLLPTRVAAELVANEYAGQGEVIDPAT 91

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           M +T + NT +D      +  ++++++ +  +D + Y A
Sbjct: 92  MPVTRLVNTALDGVAHHAQ-PVLEDVLRYASSDLLCYRA 129


>gi|103487585|ref|YP_617146.1| ATP12 ATPase [Sphingopyxis alaskensis RB2256]
 gi|98977662|gb|ABF53813.1| ATP12 ATPase [Sphingopyxis alaskensis RB2256]
          Length = 229

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/71 (42%), Positives = 42/71 (59%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+V ++     + I+LD R ++TP      V+S  LA AIAAEWD   ETI  + M
Sbjct: 2   KRFWKEVTVVAEGVGWSIALDGRPVRTPQRATLMVASAALAEAIAAEWDDVGETIDPAAM 61

Query: 90  HLTAICNTVID 100
            +T + N  ID
Sbjct: 62  PMTGLANAAID 72


>gi|388518015|gb|AFK47069.1| unknown [Medicago truncatula]
          Length = 321

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 4/101 (3%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFYK+V   E++    + + LD+R LKTP     K+ +  LA AIAAEWD Q  + I+ 
Sbjct: 83  KRFYKEVKTKEADDGNGWTVMLDYRTLKTPAKRPLKLPTVALAKAIAAEWDYQQIDGIRP 142

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            TM L  +  T ++    +T+  ++++++   + D +   A
Sbjct: 143 FTMPLMRLACTALERVP-VTRPKIIEHLVEKFNQDLVFCRA 182


>gi|354594041|ref|ZP_09012084.1| hypothetical protein CIN_07800 [Commensalibacter intestini A911]
 gi|353673152|gb|EHD14848.1| hypothetical protein CIN_07800 [Commensalibacter intestini A911]
          Length = 242

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 9/107 (8%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET---- 83
           K +RF+  V I   +  Y+I LD R +K P      V SE LA  IAAEW+   E     
Sbjct: 6   KSRRFWDSVRITHDDQGYQILLDERPVKLPKKTTLYVQSESLAKKIAAEWEKAGEKKGDP 65

Query: 84  IQRSTMHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
                + +T I  T+I+   P R T    +  ++ +++ D + YH +
Sbjct: 66  FSFDLLPITRIVGTMIEKIAPARET---YIHALLPYVNGDLLCYHTD 109


>gi|254452555|ref|ZP_05065992.1| ATP12 ATPase [Octadecabacter arcticus 238]
 gi|198266961|gb|EDY91231.1| ATP12 ATPase [Octadecabacter arcticus 238]
          Length = 240

 Score = 50.1 bits (118), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+  V ++E +G + + LD R +KTP      V +  +A A+A EW    E I  + M
Sbjct: 7   KRFWTDVNVIEIDGGFAVHLDARPVKTPAKAALVVPTRSMADAVAGEWRLVVEKIDPNLM 66

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            +T   N  ID     T+F  V  ++  +  +D + Y A 
Sbjct: 67  PVTRSANASID--KVATQFGEVATMLAAYGGSDLLCYRAE 104


>gi|83858517|ref|ZP_00952039.1| hypothetical protein OA2633_03421 [Oceanicaulis sp. HTCC2633]
 gi|83853340|gb|EAP91192.1| hypothetical protein OA2633_03421 [Oceanicaulis sp. HTCC2633]
          Length = 246

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 54/112 (48%), Gaps = 1/112 (0%)

Query: 17  SIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAE 76
           S+   K    E PKRFYK+V      G + I LD R +KTP      V SE LA A+AAE
Sbjct: 2   SMSKAKAENRELPKRFYKEVSTQPGEGGWSILLDGRPVKTPAKRALHVPSETLATALAAE 61

Query: 77  WDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           W AQ   I   TM +T I +  +D      +    + + NF  TD + + A 
Sbjct: 62  WAAQETVIDPFTMPITRILHVALDR-MEAVREGAAEEVANFGRTDLLSHRAE 112


>gi|148694658|gb|EDL26605.1| ATP synthase mitochondrial F1 complex assembly factor 2, isoform
           CRA_a [Mus musculus]
          Length = 184

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 27/37 (72%)

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           MHLT +CNT +DNP + +K  L++  + FLDTDTI Y
Sbjct: 1   MHLTTLCNTSLDNPTQRSKDQLIRAAVKFLDTDTICY 37


>gi|298292188|ref|YP_003694127.1| ATP12 ATPase [Starkeya novella DSM 506]
 gi|296928699|gb|ADH89508.1| ATP12 ATPase [Starkeya novella DSM 506]
          Length = 256

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRFYK   +     G + I LD R ++TP   L  V  E LA A+AAEW AQ E I   
Sbjct: 26  PKRFYKAATVAPVGEGLFRIELDGRPVRTPGRNLIAVPGEALAQALAAEWQAQGELIDPM 85

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           +M +T + N+ +D      + ++   I  +  +D + Y A+
Sbjct: 86  SMPMTRLANSALDGVASAME-EVAGEIARYAGSDLLCYRAD 125


>gi|402075209|gb|EJT70680.1| ATP12 chaperone [Gaeumannomyces graminis var. tritici R3-111a-1]
          Length = 441

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEP-LALAIAAEWDAQHETIQ 85
           PKRF+++V + E +G +E+ LD RK++ P    +L   +++P LA A+A EWD      Q
Sbjct: 146 PKRFWREVHVREVDGAWEVHLDSRKVRHPTTKQILRVPATKPQLAYALANEWDQMESVRQ 205

Query: 86  RSTMHLTAICNTV 98
            +  H+  +   V
Sbjct: 206 TTQQHMVPLTGLV 218


>gi|66801281|ref|XP_629566.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dictyostelium discoideum AX4]
 gi|60462945|gb|EAL61142.1| ATP synthase mitochondrial F1 complex assembly factor 2
           [Dictyostelium discoideum AX4]
          Length = 330

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 8/99 (8%)

Query: 31  RFYKKVGILESNGD-----YEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           R+YK  G+  +  +     Y   +D RK++TP+  +    S+ +A A+AAEW AQ + I+
Sbjct: 91  RWYKTAGMCRTEPENPDQGYYPLIDERKIRTPSNHVIITPSKEIAYAVAAEWRAQEKYIK 150

Query: 86  RSTMHLTAICNTVID-NPNRLTKFDLVQNIINFLDTDTI 123
            S + +T    + +D  P    +F ++   IN L TD I
Sbjct: 151 PSRLPITQTIISCLDVRPE--GRFKIIGEFINHLATDPI 187


>gi|254417906|ref|ZP_05031630.1| ATP12 chaperone protein [Brevundimonas sp. BAL3]
 gi|196184083|gb|EDX79059.1| ATP12 chaperone protein [Brevundimonas sp. BAL3]
          Length = 259

 Score = 49.7 bits (117), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 7/105 (6%)

Query: 30  KRFYKKVGI------LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           +RF+  V +          G + + LD R  +TP      + +E  A  +A EW AQ E 
Sbjct: 25  RRFWTAVSVGPHAAHSSEGGGWAVLLDGRTPQTPAKAPLVLPTEAAAQLVAEEWAAQGEI 84

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           ++ STM  T + +T ID   +  +  + + I  +  +D + Y A 
Sbjct: 85  VEPSTMPATRLASTAIDRIGQ-AREPVAEEIAAYAGSDVVCYLAE 128


>gi|347761707|ref|YP_004869268.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconacetobacter
           xylinus NBRC 3288]
 gi|347580677|dbj|BAK84898.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconacetobacter
           xylinus NBRC 3288]
          Length = 254

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 10/107 (9%)

Query: 30  KRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDA----QHETI 84
           +RF+ +  I   + G + + LD R ++ P G    V SE LA AIA EW A    +    
Sbjct: 18  RRFWAQACIAAVAEGGFTVELDGRGIRLPGGAALVVQSEALASAIAGEWAAAGGEKGGHF 77

Query: 85  QRSTMHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHANF 129
               + +T I  T+I+   P+ + +   V  ++ ++D + + Y A++
Sbjct: 78  TPDDLPMTRIAGTMIERVAPDPMAQ---VAALLQYVDGELLCYRADY 121


>gi|226502356|ref|NP_001148797.1| LOC100282414 [Zea mays]
 gi|195622214|gb|ACG32937.1| ATP12 ATPase [Zea mays]
          Length = 318

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 30  KRFYKKVGIL---ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQ 85
           KRFY+   +    + NG + + LD+R LK+P   + K+ S  LA+AIAAEW+ Q  + I+
Sbjct: 80  KRFYRDATVRRADDGNG-WTVMLDYRTLKSPAKRVLKLPSRALAMAIAAEWEYQESDGIR 138

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
             TM L  +  T ++    LT+  ++ N++     D +
Sbjct: 139 PFTMPLMKLACTALERVP-LTRRKVIDNLMKKFHQDLV 175


>gi|359397963|ref|ZP_09190987.1| ATP12 ATPase [Novosphingobium pentaromativorans US6-1]
 gi|357600381|gb|EHJ62076.1| ATP12 ATPase [Novosphingobium pentaromativorans US6-1]
          Length = 232

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V + E++  + + LD R +KT  G    V + PLA A+A EW AQ E I  +  
Sbjct: 2   KRFYKEVTVGETDSGWRVLLDGRPIKTAGGRTQIVPTRPLAEALAEEWAAQGEDIDPAGF 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            L  +C+  ID    + + + ++ ++ + +TDT+ Y A+
Sbjct: 62  VLRDLCDFAIDAVA-VDRAEAIRGMVPYAETDTLCYRAD 99


>gi|195644694|gb|ACG41815.1| ATP12 ATPase [Zea mays]
 gi|414887877|tpg|DAA63891.1| TPA: ATP12 ATPase [Zea mays]
          Length = 318

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 30  KRFYKKVGIL---ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQ 85
           KRFY+   +    + NG + + LD+R LK+P   + K+ S  LA+AIAAEW+ Q  + I+
Sbjct: 80  KRFYRDATVRRADDGNG-WTVMLDYRTLKSPAKRVLKLPSRALAMAIAAEWEYQESDGIR 138

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
             TM L  +  T ++    LT+  ++ N++     D +
Sbjct: 139 PFTMPLMKLACTALERVP-LTRRKVIDNLMKKFHQDLV 175


>gi|121709077|ref|XP_001272299.1| ATP12 chaperone protein, putative [Aspergillus clavatus NRRL 1]
 gi|119400448|gb|EAW10873.1| ATP12 chaperone protein, putative [Aspergillus clavatus NRRL 1]
          Length = 366

 Score = 49.3 bits (116), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 13/118 (11%)

Query: 19  QSCKYSALEKPKRFYKKVGI-LESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAA 75
           Q  K S++ K KRF+K V +  + +GDYE+ LD R ++TP   +  + S++P LA AIA 
Sbjct: 79  QPSKPSSVLK-KRFWKNVDVKRKPDGDYEVMLDTRPIRTPAKDILSIPSTKPQLANAIAL 137

Query: 76  EWD---AQHETIQRSTMHLTAICNTVIDNPNR-----LTKFDLVQNI-INFLDTDTIL 124
           EWD   +  + ++   + LT++ +   D          T  D + N+ + +L TDT+L
Sbjct: 138 EWDVMTSAQQALKNHLIPLTSLASRAADIAQEDARGITTSRDQIVNVAMRYLSTDTLL 195


>gi|317156020|ref|XP_001825519.2| ATP12 chaperone protein [Aspergillus oryzae RIB40]
          Length = 360

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 12/107 (11%)

Query: 30  KRFYKKVGI-LESNGDYEISLDHRKLKTPN-GVLFKVSSEP-LALAIAAEWD---AQHET 83
           KRF+K V + ++  GDY+  LD R ++TP   VL+   ++P LA  IA EWD   +  + 
Sbjct: 83  KRFWKSVDVRIKPEGDYQALLDTRPVRTPTKDVLYIPPTKPHLAHLIALEWDVMTSAQQA 142

Query: 84  IQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTIL 124
           ++   + LT++     D      N    T+  +V+  + +L+TDT+L
Sbjct: 143 LKNHMIPLTSLAARAADIVREDANGETTTRDQIVKTAMRYLETDTLL 189


>gi|156056344|ref|XP_001594096.1| hypothetical protein SS1G_05525 [Sclerotinia sclerotiorum 1980]
 gi|154703308|gb|EDO03047.1| hypothetical protein SS1G_05525 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 375

 Score = 49.3 bits (116), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 11/124 (8%)

Query: 15  INSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSS-EP-LALA 72
           + ++ S K     K KRF+K V I  +    +I LD R L+ P+  +  +   +P LA A
Sbjct: 84  MRAVASGKGGGTAKMKRFWKDVNIQHTEEGLQIFLDKRALRRPSKEILTIPHHKPHLASA 143

Query: 73  IAAEWD---AQHETIQRSTMHLTAICNTVID-----NPNRLTKFD-LVQNIINFLDTDTI 123
           IA EWD   +  + ++   + +T++ N  +D        R T  D +V  ++ +LDTD++
Sbjct: 144 IALEWDLLVSAQQALKTHLIPMTSLVNRALDIIDEEKEGRNTIRDNIVTTVMRYLDTDSL 203

Query: 124 LYHA 127
           L  A
Sbjct: 204 LCWA 207


>gi|307136314|gb|ADN34137.1| ATP12-like protein [Cucumis melo subsp. melo]
          Length = 329

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 4/101 (3%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFY+KV   E++    + + LD+R LKTP     K+ +  LA A+AAEW+ Q  + I+ 
Sbjct: 92  KRFYQKVTTREADDGNGWTVMLDYRTLKTPTKRPLKLPTLGLAKAVAAEWEYQETDGIRP 151

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            TM L  +  T ++    LT+  ++++++   + D +   A
Sbjct: 152 FTMPLMKLACTALER-VPLTRPKIIEHLMGKFNRDLVFCRA 191


>gi|222637548|gb|EEE67680.1| hypothetical protein OsJ_25328 [Oryza sativa Japonica Group]
          Length = 369

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 30  KRFYKKVGIL---ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQ 85
           KRFY++  +    + NG + + LD+R LK+P     K+ S  LA+AIAAEW+ Q  + I+
Sbjct: 83  KRFYREATVRRADDGNG-WSVMLDYRTLKSPAKRPLKLQSRTLAMAIAAEWEYQEADGIR 141

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTIL 124
             TM L  +  T ++    LT+  ++ N++     D + 
Sbjct: 142 PFTMPLMKLACTALERVP-LTRKKIIDNLMKKFHQDLVF 179


>gi|341614657|ref|ZP_08701526.1| ATP12 ATPase [Citromicrobium sp. JLT1363]
          Length = 233

 Score = 48.9 bits (115), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+ +  + E++G +++ LD R +KT  G    V ++ L   + AEW    + +Q    
Sbjct: 2   KRFWTEATLREADGGWQVWLDERAVKTRCGSPQVVPTQALGEVLRAEWADAPDEVQPDHF 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            +  + +  +D  ++  +  +V  ++ F D DT+ Y A 
Sbjct: 62  PMRDLADRALDTLSK-ERESVVSRLLGFADGDTLCYRAE 99


>gi|347832156|emb|CCD47853.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 375

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%)

Query: 15  INSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSS-EP-LALA 72
           + ++   K     K KRF+K V + ++    +I LD R L+ P+  +  V   +P LA A
Sbjct: 84  MRAVADGKGGGTAKLKRFWKDVNVQDTEEGLQIFLDKRALRRPSKDILTVPHHKPHLASA 143

Query: 73  IAAEWD---AQHETIQRSTMHLTAICNTVID-----NPNRLT-KFDLVQNIINFLDTDTI 123
           IA EWD   +  + ++   + +T++ N  +D     N  R T +  +V  ++ +LDTD++
Sbjct: 144 IALEWDLLVSAQQALKTHLIPMTSLVNRALDIIDEENEGRDTIRNHIVTTVMRYLDTDSL 203

Query: 124 LYHA 127
           L  A
Sbjct: 204 LCWA 207


>gi|358374511|dbj|GAA91102.1| oxysterol binding protein [Aspergillus kawachii IFO 4308]
          Length = 1619

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 12/107 (11%)

Query: 30  KRFYKKVGILES-NGDYEISLDHRKLKTPN-GVLFKVSSEP-LALAIAAEWDAQ---HET 83
           KRF+K V + +  +GDY++ LD R ++TP+  VL   S++P LA AIA EWD      + 
Sbjct: 87  KRFWKNVDVKQKPDGDYQVLLDTRPIRTPSKDVLSIPSTKPYLAHAIALEWDVMTTAQQA 146

Query: 84  IQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTIL 124
           ++   + LT++     D           T+  +++  + +L+TDT+L
Sbjct: 147 LKNHLIPLTSLTARAADIAAEDARGETTTRDQILKTAMRYLETDTLL 193


>gi|37782440|gb|AAP34466.1| LP3663 [Homo sapiens]
          Length = 184

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           MHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 1   MHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 37


>gi|154302734|ref|XP_001551776.1| hypothetical protein BC1G_09482 [Botryotinia fuckeliana B05.10]
          Length = 292

 Score = 48.9 bits (115), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 11/124 (8%)

Query: 15  INSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSS-EP-LALA 72
           + ++   K     K KRF+K V + ++    +I LD R L+ P+  +  V   +P LA A
Sbjct: 1   MRAVADGKGGGTAKLKRFWKDVNVQDTEEGLQIFLDKRALRRPSKDILTVPHHKPHLASA 60

Query: 73  IAAEWD---AQHETIQRSTMHLTAICNTVID-----NPNRLT-KFDLVQNIINFLDTDTI 123
           IA EWD   +  + ++   + +T++ N  +D     N  R T +  +V  ++ +LDTD++
Sbjct: 61  IALEWDLLVSAQQALKTHLIPMTSLVNRALDIIDEENEGRDTIRNHIVTTVMRYLDTDSL 120

Query: 124 LYHA 127
           L  A
Sbjct: 121 LCWA 124


>gi|149052828|gb|EDM04645.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_b [Rattus norvegicus]
 gi|149052830|gb|EDM04647.1| ATP synthase mitochondrial F1 complex assembly factor 2
           (predicted), isoform CRA_b [Rattus norvegicus]
          Length = 184

 Score = 48.9 bits (115), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           MHLT +CNT +DNP +  K  L++  + FLDTDTI Y
Sbjct: 1   MHLTTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICY 37


>gi|163760836|ref|ZP_02167915.1| hypothetical protein HPDFL43_06817 [Hoeflea phototrophica DFL-43]
 gi|162281880|gb|EDQ32172.1| hypothetical protein HPDFL43_06817 [Hoeflea phototrophica DFL-43]
          Length = 262

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 2/101 (1%)

Query: 29  PKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           PKRF+ + G+   + G + ++LD + ++TP+    +V  E LA A+AAEW AQ E I  +
Sbjct: 31  PKRFFTEAGVKPGTGGGFVVALDGKPVRTPSRRELEVPFEALAEAVAAEWSAQKEHIDPA 90

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M LT + NT ID  +   +  + + I+ +  TD + Y A 
Sbjct: 91  VMPLTRMVNTAIDGVS-TAREAVFEEILRYGGTDMLCYRAE 130


>gi|334141384|ref|YP_004534590.1| ATP12 ATPase [Novosphingobium sp. PP1Y]
 gi|333939414|emb|CCA92772.1| ATP12 ATPase [Novosphingobium sp. PP1Y]
          Length = 232

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK+V + E++  + + LD R +KT  G    V + PLA A+A EW AQ E I  +  
Sbjct: 2   KRFYKEVTVGETDSGWRVLLDGRPIKTAGGRTQIVPTMPLAEALAEEWAAQGEDIDPAGF 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            L  +C+  ID    + + + ++ ++ + +TDT+ Y A+
Sbjct: 62  VLRDLCDFAIDAVA-VDRAEAIRGMVPYAETDTLCYRAD 99


>gi|115473693|ref|NP_001060445.1| Os07g0644000 [Oryza sativa Japonica Group]
 gi|34393715|dbj|BAC83027.1| putative ATP synthase mitochondrial F1 complex assembly factor2
           [Oryza sativa Japonica Group]
 gi|113611981|dbj|BAF22359.1| Os07g0644000 [Oryza sativa Japonica Group]
 gi|218200115|gb|EEC82542.1| hypothetical protein OsI_27075 [Oryza sativa Indica Group]
          Length = 321

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 6/98 (6%)

Query: 30  KRFYKKVGIL---ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQ 85
           KRFY++  +    + NG + + LD+R LK+P     K+ S  LA+AIAAEW+ Q  + I+
Sbjct: 83  KRFYREATVRRADDGNG-WSVMLDYRTLKSPAKRPLKLQSRTLAMAIAAEWEYQEADGIR 141

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
             TM L  +  T ++    LT+  ++ N++     D +
Sbjct: 142 PFTMPLMKLACTALERVP-LTRKKIIDNLMKKFHQDLV 178


>gi|395786459|ref|ZP_10466186.1| hypothetical protein ME5_01504 [Bartonella tamiae Th239]
 gi|423716648|ref|ZP_17690838.1| hypothetical protein MEG_00378 [Bartonella tamiae Th307]
 gi|395422757|gb|EJF88953.1| hypothetical protein ME5_01504 [Bartonella tamiae Th239]
 gi|395428722|gb|EJF94797.1| hypothetical protein MEG_00378 [Bartonella tamiae Th307]
          Length = 255

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 5/100 (5%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY    ++ ++  + + LD + +KTP      V ++ LA  ++ E++ Q + I    M
Sbjct: 27  KRFYDNATVVPTDNGFAVLLDGKCVKTPGRKELIVPNQDLATHLSVEFNVQEDFIDPRKM 86

Query: 90  HLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHA 127
            +T + NTVID    NR     + ++I+ FL +D + Y A
Sbjct: 87  SITRLVNTVIDGVADNREA---VEEDILRFLASDLLFYRA 123


>gi|119489343|ref|XP_001262882.1| ATP12 chaperone protein, putative [Neosartorya fischeri NRRL 181]
 gi|119411040|gb|EAW20985.1| ATP12 chaperone protein, putative [Neosartorya fischeri NRRL 181]
          Length = 368

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 30  KRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWDAQHETIQR 86
           KRF+K V + +  +G+Y++ LD R ++TP   +  + S++P LA AIA EWD      Q 
Sbjct: 90  KRFWKNVDVRKRPDGEYQVLLDTRPIRTPTKDILSIPSTKPHLAHAIALEWDVMTSARQA 149

Query: 87  STMH------LTAICNTVIDNPNR---LTKFDLVQNIINFLDTDTIL 124
              H      LTA    +     R    T+  +V+  + +LDTDT+L
Sbjct: 150 LKNHLIPLTSLTARAGDIAQEDARGETTTRDQIVKLAMRYLDTDTLL 196


>gi|350295714|gb|EGZ76691.1| ATP12-domain-containing protein [Neurospora tetrasperma FGSC 2509]
          Length = 409

 Score = 48.5 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 12/107 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWDAQHETIQR 86
           +RF+K V +   N   EI LD R L+ P+    +  +++   LA A+A EWD      Q 
Sbjct: 109 RRFWKSVHVATKNDMNEIHLDSRPLRRPDTKSIIRLRLTKPSLASALAIEWDQLVSAQQA 168

Query: 87  STMHLTAICNTV-----IDNPNRLTKFDLVQNI----INFLDTDTIL 124
           +  HL  + + V     I + + L K D+   I    + +LDTD++L
Sbjct: 169 TKQHLIPLTSLVCRALDIADQDSLGKTDIRNAIATVLLRYLDTDSLL 215


>gi|260428429|ref|ZP_05782408.1| ATP12 ATPase [Citreicella sp. SE45]
 gi|260422921|gb|EEX16172.1| ATP12 ATPase [Citreicella sp. SE45]
          Length = 237

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           P+RFY +  + E+ G Y I+LD R++ TP      V +  LA AIAAEW AQ E I   T
Sbjct: 6   PRRFYTEATVTETEGGYGIALDGRRVMTPGKSPLVVPTRALAEAIAAEWAAQGEKIAPET 65

Query: 89  MHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHA 127
           M  T   N+ I+   P R    D+   +  + D+D + Y A
Sbjct: 66  MPFTRTANSAIEKVAPQRAAVADM---LAEYGDSDLLCYRA 103


>gi|357121729|ref|XP_003562570.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like [Brachypodium distachyon]
          Length = 306

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 8/113 (7%)

Query: 30  KRFYKKVGIL---ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ-HETIQ 85
           KRFY+   +    + NG + + LD+R LK+P     K+ S  LA+AIAAEW+ Q  + I+
Sbjct: 68  KRFYRDATVRRADDGNG-WTVMLDYRTLKSPAKRPLKLHSRTLAMAIAAEWEYQDSDGIR 126

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA--NFFLRKGVF 136
             TM L  +  T ++    LT+  ++ N++     D +   +  +  L KGV+
Sbjct: 127 PFTMPLMKLACTALERVP-LTRAKIINNLMQKFHQDLVFCRSPPDDELTKGVY 178


>gi|378729878|gb|EHY56337.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Exophiala
           dermatitidis NIH/UT8656]
          Length = 375

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 11/109 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVS-SEP-LALAIAAEWD---AQHETI 84
           KRF+K V + E    Y++ LD R ++TP   +  V  S+P LA AIA EWD   +  + +
Sbjct: 100 KRFWKDVHVKEVPEGYQVHLDSRPVRTPAKTILTVPRSKPHLAHAIAIEWDMLESAQQAL 159

Query: 85  QRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTILYHA 127
           +   + +T+I     D        +   + +++  ++ +LDTDT+L  A
Sbjct: 160 KNHNIPMTSIVARAQDISEAEARGSTAIREEIITVMMRYLDTDTLLCWA 208


>gi|295658336|ref|XP_002789729.1| ATP12 chaperone protein [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226283032|gb|EEH38598.1| ATP12 chaperone protein [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 440

 Score = 48.1 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 12/135 (8%)

Query: 5   KQTTMRYPRLINSIQSCKYSALEKPKR-FYKKVGILESNGDYEISLDHRKLKTPNGVLFK 63
           KQ+ +     I+ +Q    + L   KR F+K V + E    +++ LD R ++TP   +  
Sbjct: 130 KQSELMQQENISEVQQGTKTTLRLLKRRFWKDVHVKEVADGHQVLLDSRPIRTPEKKIIT 189

Query: 64  V-SSEP-LALAIAAEWD---AQHETIQRSTMHLTAICNTVID------NPNRLTKFDLVQ 112
           +  S+P LA AIA EWD   + H+ ++   + LTA+     D            + ++++
Sbjct: 190 IPPSKPHLAHAIALEWDLLVSSHQALKHHLIPLTALTARAQDIALQDAASQDTIRNEILK 249

Query: 113 NIINFLDTDTILYHA 127
             + +LDTDT+L  A
Sbjct: 250 TTMRYLDTDTLLIWA 264


>gi|225452226|ref|XP_002268368.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2
           [Vitis vinifera]
 gi|296081322|emb|CBI17704.3| unnamed protein product [Vitis vinifera]
          Length = 328

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 4/101 (3%)

Query: 30  KRFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQR 86
           KRFYK+    E++    + + LD+R LKTP+    K+ +  LA AIAAEW+ Q  + I+ 
Sbjct: 90  KRFYKQASTREADDGNGWTVMLDYRTLKTPSKRPLKLPTLSLAKAIAAEWEYQQTDGIRP 149

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHA 127
            TM L  +  T ++    LT+  +++ ++     D +   A
Sbjct: 150 FTMPLMKLACTALERVP-LTRMKIIEYLMKKFHQDLVFCRA 189


>gi|395491882|ref|ZP_10423461.1| ATP12 ATPase [Sphingomonas sp. PAMC 26617]
          Length = 230

 Score = 48.1 bits (113), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET--IQRS 87
           KRF+K+V +    G   I LD R L+TP  V   + +  LA A+A EW +  E   I   
Sbjct: 2   KRFWKEVAVDAERG---IRLDDRPLRTPGRVPLTLPTAALAEAVADEWRSVEEGAEIDPR 58

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M LT + N  ID             +  + ++D + Y A+
Sbjct: 59  AMPLTGLGNAAIDRVGADPAL-FAAGLAQYGESDLLCYRAD 98


>gi|332187783|ref|ZP_08389517.1| ATP12 chaperone family protein [Sphingomonas sp. S17]
 gi|332012133|gb|EGI54204.1| ATP12 chaperone family protein [Sphingomonas sp. S17]
          Length = 229

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 4/99 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+ +V +   + +  + LD R ++TP      + +  LA A+A EW +  ET+    M
Sbjct: 2   KRFWSEVTV---DAERVVRLDDRPVRTPGRTPLALPTPALAEAVAEEWRSVGETVDPRAM 58

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + N  ID             +  + ++D + Y A+
Sbjct: 59  PLTGLANAAIDR-IAADPVPFATGLARYAESDLLCYRAD 96


>gi|344245164|gb|EGW01268.1| ATP synthase mitochondrial F1 complex assembly factor 2 [Cricetulus
           griseus]
          Length = 128

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           MHLT +CNT +DNP +  K  +++  + FLDTDTI Y
Sbjct: 1   MHLTTLCNTSLDNPTQRNKDQMIRAAVKFLDTDTICY 37


>gi|327296756|ref|XP_003233072.1| mitochondrial molecular chaperone [Trichophyton rubrum CBS 118892]
 gi|326464378|gb|EGD89831.1| mitochondrial molecular chaperone [Trichophyton rubrum CBS 118892]
          Length = 396

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 6/60 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD----AQHET 83
           KRF+K V + E+ G ++I LD R ++TP   +  V SS+P LA AIA EWD    AQH T
Sbjct: 65  KRFWKDVHVKEAAGGHQIYLDSRPVRTPEKKILTVPSSKPHLAHAIALEWDLLRTAQHAT 124


>gi|242824394|ref|XP_002488249.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218713170|gb|EED12595.1| mitochondrial molecular chaperone (Atp12), putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 393

 Score = 47.8 bits (112), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 13/118 (11%)

Query: 18  IQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAA 75
           +   K S L+   RF+K V + ES+  Y+I LD R +++P   +  V  +   LA AIA 
Sbjct: 98  VSQAKTSPLKS--RFWKDVNVKESSDGYQILLDTRPVRSPTKAILTVPNTKRHLAEAIAL 155

Query: 76  EWD---AQHETIQRSTMHLTAICNTVID--NPNRLTKFDLVQNI----INFLDTDTIL 124
           EWD   +  + +++  + LT++     D    + L +  + Q I    + +L+TDT+L
Sbjct: 156 EWDFLTSAQQALKQHLIPLTSLTTRATDIVQEDELGQQRIRQEIARTAMRYLETDTLL 213


>gi|310791079|gb|EFQ26608.1| ATP12 chaperone [Glomerella graminicola M1.001]
          Length = 384

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 18/134 (13%)

Query: 9   MRYPRLINSIQSCKYSALEKP----KRFYKKVGILESNGDYEISLDHRKLKTPNG---VL 61
           +++ ++I +    K S   KP    +RF+  V + E +G  ++ LD+R L+ PN    + 
Sbjct: 88  LKHAKIIRTSAEAKAS---KPGALKRRFWNDVNVQEVDGALQVHLDNRPLRHPNTKEIMR 144

Query: 62  FKVSSEPLALAIAAEWD----AQHETIQRSTMHLTAICNTV----IDNPNRLTKFDLVQN 113
             VS + LA A+A EWD    AQ  T Q      +  C  +     D  +   +  +   
Sbjct: 145 LPVSKQHLASALAIEWDFITSAQQATKQHMIPLTSLTCRALDIAEDDAASGAIRQSIATT 204

Query: 114 IINFLDTDTILYHA 127
           ++ +LDTD++L  A
Sbjct: 205 LMRYLDTDSLLCWA 218


>gi|349699575|ref|ZP_08901204.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconacetobacter
           europaeus LMG 18494]
          Length = 257

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 13/107 (12%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST- 88
           KRF+ +     + G + ++LD R ++ P G    V+S  LA AIA EW   H   ++   
Sbjct: 23  KRFWVQAAARPAEGGFSVALDGRGIRLPGGTPLCVASRALAGAIADEW--AHAGGEKGGD 80

Query: 89  -----MHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
                + LT I  T+I+   P+   +   V  ++ ++D + + Y A+
Sbjct: 81  FTPDDLPLTRIAGTMIERVAPDPAAQ---VTALLQYVDGELLCYRAD 124


>gi|242051068|ref|XP_002463278.1| hypothetical protein SORBIDRAFT_02g041060 [Sorghum bicolor]
 gi|241926655|gb|EER99799.1| hypothetical protein SORBIDRAFT_02g041060 [Sorghum bicolor]
          Length = 318

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 30  KRFYKKVGIL---ESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH-ETIQ 85
           KRFY+   +    + NG + + LD+R LK+P     K+ S  LA+AIAAEW+ Q  + I+
Sbjct: 80  KRFYRDATVRRADDGNG-WTVMLDYRTLKSPAKRPLKLPSRALAMAIAAEWEYQESDGIR 138

Query: 86  RSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTI 123
             TM L  +  T ++    LT+  ++ N++     D +
Sbjct: 139 PFTMPLMKLACTALERVP-LTRRKVIDNLMKKFHQDLV 175


>gi|448100651|ref|XP_004199402.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
 gi|359380824|emb|CCE83065.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
          Length = 361

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 22/141 (15%)

Query: 6   QTTMRYPR---LINSIQSCKYSALEKPKRFYKKVGI--LESNGDYEISLDHRKLKTPNGV 60
           Q  M  PR   + N+I+S      +   +F+ KV    +E    YEI LD R L+TP G 
Sbjct: 43  QANMSIPRDNTIENNIKSETNRLSQTLTKFWDKVDTEYVEDKNHYEIKLDSRTLRTPLGF 102

Query: 61  LFKVSSEP--LALAIAAEWDAQHE-TIQRSTMHLTAICNTVID----------NPNRLTK 107
              V +E   LA  I  EW +  E  I+ ++M L+++    ID          +P  +TK
Sbjct: 103 PLAVPAEKKQLAYLIQHEWSSLPELKIKLNSMPLSSLACRSIDLHNTANNEGVDPELITK 162

Query: 108 F----DLVQNIINFLDTDTIL 124
                D+  N++ + DTDT L
Sbjct: 163 VGKVDDIKLNLLRYFDTDTCL 183


>gi|410942983|ref|ZP_11374724.1| ATP synthase F1 mitochondrial assembly chaperone [Gluconobacter
           frateurii NBRC 101659]
          Length = 229

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD--AQHETIQRS 87
           KRF+K V + E +G +   LD R ++ P G +  V S  L  A+ AEW     +E     
Sbjct: 5   KRFWKSVTLGEQDGLFGPELDGRPIRLPKGTVLAVPSRSLGQALVAEWSRIPDNEAFTPE 64

Query: 88  TMHLTAICNTVIDN 101
            + LT I  T+I+ 
Sbjct: 65  QLPLTRIAGTMIER 78


>gi|451897815|emb|CCT61165.1| predicted protein [Leptosphaeria maculans JN3]
          Length = 372

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 16/120 (13%)

Query: 24  SALEKPK-----RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAE 76
           SA  KPK     RF+K V + E++G  ++ LDHR ++  N  +  V  + + LA AIA E
Sbjct: 88  SASSKPKTMLAKRFWKDVHVKEADGGLQVFLDHRPVRMANKQILTVPPTKQQLATAIALE 147

Query: 77  WD---AQHETIQRSTMHLTAICNTVID--NPNRLTKFDLVQNIINFL----DTDTILYHA 127
           WD   +  + ++   + +T++    ID    +   +  +  +I+N+L     TDT+L  A
Sbjct: 148 WDLLTSAQQALKADYIPMTSLAARAIDIETADAEGRTKVRDDILNYLMRVFTTDTLLCWA 207


>gi|393722165|ref|ZP_10342092.1| ATP12 ATPase [Sphingomonas sp. PAMC 26605]
          Length = 228

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+  V + E+     + LD + ++TP      + ++ LA A+AAEW A    I    M
Sbjct: 2   KRFWTTVTLDETRA---VFLDGKPVRTPGRAPLALPTDALAEAVAAEWRAVEGEIDPRAM 58

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT + N  ID  +P+        Q +  + ++D + Y A+
Sbjct: 59  PLTGLANAAIDRISPDPAL---FAQGLAAYGESDLLCYRAD 96


>gi|145510604|ref|XP_001441235.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408474|emb|CAK73838.1| unnamed protein product [Paramecium tetraurelia]
          Length = 266

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 9/104 (8%)

Query: 30  KRFYKKVGILESNGDYE------ISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           KRFYK V I  + G+ +      + LD + +KTP+     + +  LA  IA E+ AQ E 
Sbjct: 23  KRFYKDVKIEMAFGEADPYRQWLVKLDGKTVKTPSKNELSIPTPQLAQRIADEFSAQAEF 82

Query: 84  IQRSTMHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILY 125
           I  +TM L  +    +D      + +F +  +II++L+ DT+L+
Sbjct: 83  INPATMPLMTLARNAVDIEADENMREF-MEHSIISYLERDTVLF 125


>gi|389878458|ref|YP_006372023.1| ATP synthase [Tistrella mobilis KA081020-065]
 gi|388529242|gb|AFK54439.1| ATP synthase [Tistrella mobilis KA081020-065]
          Length = 245

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 11/112 (9%)

Query: 25  ALEKPKRFYKKV------GILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWD 78
           A+ + KRFYK        G   + G + + LD R L+TP      V    LA  IA EW 
Sbjct: 4   AVTRRKRFYKAAEAAPSAGEGAAGGGWAVLLDGRGLRTPAKAPLVVPGRALAQLIADEWA 63

Query: 79  AQHETIQRSTMHLTAICNTVIDN--PNRLTKFDLVQNIINFLDTDTILYHAN 128
           AQ   I   TM  T + N VID   P+R     +   +  ++ TD + Y A+
Sbjct: 64  AQETHIAPETMPATKLANVVIDRVVPHR---AQIAAELAGYIGTDLVCYRAD 112


>gi|154279464|ref|XP_001540545.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412488|gb|EDN07875.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 218

 Score = 47.4 bits (111), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 13/125 (10%)

Query: 16  NSIQSCKYSALEKP--KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LAL 71
           N   S + SA  KP  +RF+K V + E +  Y+I LD R ++TP   +  + +S+P LA 
Sbjct: 78  NVADSGQGSASSKPLKRRFWKDVHVKEVDDGYQIFLDSRAVRTPAKKILTIPASKPHLAH 137

Query: 72  AIAAEWD---AQHETIQRSTMHLTAICN-----TVIDNPNRLT-KFDLVQNIINFLDTDT 122
           AIA EWD   +  + +++  + LT++        V D   + T +  + +  + +LDTD 
Sbjct: 138 AIALEWDLLVSAQQALKQHLIPLTSLTARAQDIAVEDAAGQNTIRNQITKATMRYLDTDP 197

Query: 123 ILYHA 127
           +L  A
Sbjct: 198 LLSWA 202


>gi|164428513|ref|XP_965816.2| hypothetical protein NCU00676 [Neurospora crassa OR74A]
 gi|157072176|gb|EAA36580.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 431

 Score = 47.4 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 12/107 (11%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWDAQHETIQR 86
           +RF+K V +   N   EI LD R L+ P+    +   ++   LA A+A EWD      Q 
Sbjct: 138 RRFWKSVHVATKNDMNEIHLDSRPLRRPDTKSIIRLPLTKPSLASALAIEWDQLVSAQQA 197

Query: 87  STMHLTAICNTV-----IDNPNRLTKFDLVQNI----INFLDTDTIL 124
           +  HL  + + V     I + + L K D+   I    + +LDTD++L
Sbjct: 198 TKQHLIPLTSLVCRALDIADQDSLGKTDIRNAIATVLLRYLDTDSLL 244


>gi|448104393|ref|XP_004200261.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
 gi|359381683|emb|CCE82142.1| Piso0_002840 [Millerozyma farinosa CBS 7064]
          Length = 361

 Score = 47.0 bits (110), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 22/141 (15%)

Query: 6   QTTMRYPR---LINSIQSCKYSALEKPKRFYKKVG--ILESNGDYEISLDHRKLKTPNGV 60
           +  M  PR   + N+IQS      +   +F+ KV    +E    YEI LD R L+TP G 
Sbjct: 43  RANMSMPRDNTIENNIQSETNRLSKTLTKFWDKVDTVFVEDKNHYEIKLDSRTLRTPLGF 102

Query: 61  LFKVSSEP--LALAIAAEWDAQHE-TIQRSTMHLTAICNTVID----------NPNRLTK 107
              V +E   LA  I  EW    E  I+ ++M L+++    ID          +P  +TK
Sbjct: 103 SLTVPAEKKQLAYLIQHEWSTLPELKIKLNSMPLSSLACRSIDLHNTTNNESVDPELITK 162

Query: 108 F----DLVQNIINFLDTDTIL 124
                D+  N++ + DTDT L
Sbjct: 163 VGKVDDIKLNLLRYFDTDTCL 183


>gi|406861423|gb|EKD14477.1| hypothetical protein MBM_07198 [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 379

 Score = 46.6 bits (109), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 59/114 (51%), Gaps = 14/114 (12%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWD---AQHE 82
           K KRF+++V +  ++   +I LD R L+ P+  +  +  S   LA AIA EWD   +  +
Sbjct: 94  KTKRFWREVHVKGADEGLQIHLDTRPLRRPSKTILTIPPSKPALATAIALEWDLLTSAQQ 153

Query: 83  TIQRSTMHLTAICNTVIDNPNR---------LTKFDLVQNIINFLDTDTILYHA 127
            +Q+  + LT++ +  +D  +            +  +  +++ +LDTD++L  A
Sbjct: 154 ALQQHLIPLTSLVSRALDIADEDASTSSGAGPIRTGITTSLMRYLDTDSLLCWA 207


>gi|114327248|ref|YP_744405.1| chaperone, ATP12 family protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315422|gb|ABI61482.1| chaperone, ATP12 family protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 236

 Score = 46.6 bits (109), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 4/102 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEW---DAQHETIQR 86
           KRF+K+  +++      ++LD R ++ P GV  + ++  LA AIA EW    A  E    
Sbjct: 2   KRFWKEAAVVQEAAGLAVTLDGRPMRLPGGVSLRFANRALAEAIAVEWGQAGAPGEPFSF 61

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
             + +T +  T  +    +     V+ ++++  +D + Y A+
Sbjct: 62  DMVPMTRLAGTAQER-VAVDPAASVEALVSYGGSDLLCYRAD 102


>gi|307946326|ref|ZP_07661661.1| ATP12 chaperone protein [Roseibium sp. TrichSKD4]
 gi|307769990|gb|EFO29216.1| ATP12 chaperone protein [Roseibium sp. TrichSKD4]
          Length = 257

 Score = 46.2 bits (108), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           + S  E PKRFYKK    + +G + I LD R +KTP  V   + +  LA A+AAEW+AQ 
Sbjct: 22  ELSKRELPKRFYKKAEAAKVDGGFAIHLDGRAVKTPAKVTLLLPTLTLAEAVAAEWEAQE 81

Query: 82  ETIQRSTMHLTAICNTVIDNPNRLTKF-DLVQNIINFLDTDTILYHAN 128
           + I    M LT I N+  D     +KF D+   I  F+  D + Y A+
Sbjct: 82  KEIDPGKMPLTRISNSAQDAVT--SKFADVADEITRFVGNDALCYRAD 127


>gi|255954877|ref|XP_002568191.1| Pc21g11600 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211589902|emb|CAP96057.1| Pc21g11600 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 361

 Score = 46.2 bits (108), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 11/106 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTP-NGVLFKVSSEP-LALAIAAEWD---AQHETI 84
           KRF+K V +      Y++ LD R ++TP   VL   S++P LA A+A EWD   +  + +
Sbjct: 85  KRFWKDVHVHGKLDGYQVLLDKRPVRTPMKEVLSIPSTKPHLAHAVALEWDVMTSAQQAL 144

Query: 85  QRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTIL 124
           +  ++ +T++     D        +  T+  ++   + +LDTDT+L
Sbjct: 145 KSHSIPMTSLAARATDIAREDAEGDSTTRKQIITTAMRYLDTDTLL 190


>gi|336463652|gb|EGO51892.1| hypothetical protein NEUTE1DRAFT_89676 [Neurospora tetrasperma FGSC
           2508]
          Length = 401

 Score = 45.8 bits (107), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 12/110 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWDAQHETIQR 86
           +RF+K V +   N   EI LD R L+ P+    +   ++   LA A+A EWD      Q 
Sbjct: 110 RRFWKSVHVATKNDMNEIHLDSRPLRRPDTKSIIRLPLTKPSLASALAIEWDQLVSAQQA 169

Query: 87  STMHLTAICNTV-----IDNPNRLTKFDLVQNI----INFLDTDTILYHA 127
           +  HL  + + V     I + + L K D+   I    + +LDTD++L  A
Sbjct: 170 TKQHLIPLTSLVCRALDIADEDSLGKTDIRNAIATVLLRYLDTDSLLCWA 219


>gi|154248679|ref|YP_001419637.1| ATP12 ATPase [Xanthobacter autotrophicus Py2]
 gi|154162764|gb|ABS69980.1| ATP12 ATPase [Xanthobacter autotrophicus Py2]
          Length = 272

 Score = 45.8 bits (107), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRFY  V + E++G + I LD R ++TP   L    + PLA A+AAEW  Q + I    
Sbjct: 44  PKRFYTDVSVGEADGGFTILLDGRPVRTPARGLLLAPTRPLAEAMAAEWAEQEKEINPFF 103

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M LT + N  +D      +  + + ++ +  +D + Y A+
Sbjct: 104 MPLTRLVNVALDRVGPEAEA-VREEVVRYAGSDMLFYRAD 142


>gi|312377828|gb|EFR24564.1| hypothetical protein AND_10746 [Anopheles darlingi]
          Length = 216

 Score = 45.4 bits (106), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 31/41 (75%)

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           T+ + A+ +T IDNPN + K D+V  ++N++ TDTIL+H++
Sbjct: 33  TITVNALSSTFIDNPNGVQKHDMVNYLVNYISTDTILFHSS 73


>gi|384248226|gb|EIE21711.1| ATP12-domain-containing protein, partial [Coccomyxa subellipsoidea
           C-169]
          Length = 275

 Score = 45.1 bits (105), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 18  IQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEW 77
           +Q+ + +      R+   + + E+ G   I  D + L+TP      + +  LALA+AAEW
Sbjct: 36  VQTIRTAFTVAASRWQGHITVQETTGGCMILFDGKALRTPARFPLILPNRALALAVAAEW 95

Query: 78  DAQHET-IQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDT 122
             Q +  I+  TM L ++  T ID P    +  +V  ++ +L  D+
Sbjct: 96  QWQDDMKIRPFTMPLMSLAATAIDQPKH--RNLVVNTLLTYLHADS 139


>gi|429207723|ref|ZP_19198979.1| Chaperone [Rhodobacter sp. AKP1]
 gi|428189116|gb|EKX57672.1| Chaperone [Rhodobacter sp. AKP1]
          Length = 221

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 38  ILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNT 97
           + E  G + + LD R ++TP      + +  LA A+A+EW AQ   ++  TM +T   N+
Sbjct: 1   MAEEPGGFAVLLDGRGVRTPAKRPLILPTCALAEAVASEWRAQEGEVRPQTMPVTRSANS 60

Query: 98  VIDNPNRLTKFDLVQNII-NFLDTDTILYHAN 128
            +D      +FD V  ++  +  TD + Y A 
Sbjct: 61  ALD--KVAPQFDEVTEMLAAYGGTDLLCYRAT 90


>gi|168061768|ref|XP_001782858.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665636|gb|EDQ52313.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 242

 Score = 45.1 bits (105), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 30  KRFYKKVGI--LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           +RFYKK      E    Y + LD R+LKTP     KV +  LALAIAAEW+ Q   I+  
Sbjct: 12  RRFYKKTHTKPAEDGSGYIVMLDGRELKTPARKPLKVPNAALALAIAAEWEWQQSGIRPY 71

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM +  +  T ID   R  +  ++  ++ +  TD++   A 
Sbjct: 72  TMPMMKLAATSIDQIPR-DRERVIHTLLKYFHTDSLCLRAE 111


>gi|241948329|ref|XP_002416887.1| mitochondrial molecular chaperone, putative [Candida dubliniensis
           CD36]
 gi|223640225|emb|CAX44474.1| mitochondrial molecular chaperone, putative [Candida dubliniensis
           CD36]
          Length = 356

 Score = 44.7 bits (104), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 16/128 (12%)

Query: 16  NSIQSCKYSALEK----PKRFYK--KVGILESNGDYEISLDHRKLKTPNGVLFKV--SSE 67
           NSI+S   S   K     KRF+K  +V   +    YEI LD + L+TP G   ++  + +
Sbjct: 49  NSIESNILSETNKLSKIGKRFWKNGQVKFNKQTEKYEIQLDGKTLRTPLGYPLELPKNKK 108

Query: 68  PLALAIAAEWDAQHET-IQRSTMHLTAICNTVIDNPNR-------LTKFDLVQNIINFLD 119
            LA  IA EW    +  ++ ST+ LT++    ID  N+       L   D+   ++ +LD
Sbjct: 109 QLAYLIAHEWTHLPDIKVKSSTLPLTSLVTRAIDLSNQENVKEKMLELQDIKLQMLKYLD 168

Query: 120 TDTILYHA 127
           TDT L  A
Sbjct: 169 TDTCLIFA 176


>gi|302918879|ref|XP_003052747.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256733687|gb|EEU47034.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 366

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 15/113 (13%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWD----AQHE 82
           KRF+K V + E +G  ++ LD R L+ P     V   +S   LA A+A EWD    AQ  
Sbjct: 89  KRFWKDVAVKEVDGSLQVFLDTRPLRHPVSKEIVCLPMSKPDLASALALEWDLLTSAQDA 148

Query: 83  TIQRSTMHLTAICNTV-IDNPNRLTKFDL--VQNIIN-----FLDTDTILYHA 127
           T Q      +  C  + I   ++ +  ++  V+N I+     +LDTD+IL  A
Sbjct: 149 TRQHLIPLTSLTCRALDIAEADKASGAEISEVRNAISTTLLRYLDTDSILCWA 201


>gi|156847017|ref|XP_001646394.1| hypothetical protein Kpol_2001p41 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117070|gb|EDO18536.1| hypothetical protein Kpol_2001p41 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 342

 Score = 44.3 bits (103), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 18/112 (16%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEW-DAQHETIQ 85
           +F+ KV     E++G Y I LD + + TP G L  V  + + LAL ++ EW +  + +I+
Sbjct: 73  KFWDKVSYHYDETSGKYLIQLDSKTINTPMGNLLAVDKNKKMLALMLSNEWKNLPNLSIK 132

Query: 86  RSTMHLTAICNTVID--------NPNRLTKFD-----LVQNIINFLDTDTIL 124
           + ++ LT++ +  ID        N + + KF+     ++ +++ +LDTDT+L
Sbjct: 133 KYSLPLTSLTSRCIDLEAVNKNGNLDDIVKFNGDRNKIINDLLRYLDTDTLL 184


>gi|328770747|gb|EGF80788.1| hypothetical protein BATDEDRAFT_11145 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 225

 Score = 44.3 bits (103), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%)

Query: 49  LDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDN-PNRL 105
           LD R LKTP+G  V+  +S    A   AAEW+ Q + ++  ++ LT+I    +D   +  
Sbjct: 13  LDGRILKTPDGNQVVIPLSRPAFAALTAAEWEGQDKVLKSHSLPLTSIIVRAVDTFKDDS 72

Query: 106 TKFDLVQNIINFLDTDTILYHANF 129
            +  ++  ++ ++ TD+I Y  ++
Sbjct: 73  IRQGVIDTMLKYVHTDSICYQQSY 96


>gi|328543396|ref|YP_004303505.1| ATP12 chaperone protein [Polymorphum gilvum SL003B-26A1]
 gi|326413141|gb|ADZ70204.1| ATP12 chaperone protein [Polymorphum gilvum SL003B-26A1]
          Length = 267

 Score = 43.9 bits (102), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 27  EKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           E PKRFY       + G + + LD R ++TP      ++S+ LA A+AAEW AQ   I  
Sbjct: 31  ELPKRFYTAATAAPAEGGFAVLLDGRAVRTPGKKALVLASKRLAEAVAAEWAAQEGVINP 90

Query: 87  STMHLTAICNTVIDNPNRLTKFDLVQN-IINFLDTDTILYHAN 128
           +TM LT I N  ID      +F  V + I  +   D + Y A 
Sbjct: 91  ATMPLTRIANAAIDGVAE--RFAAVADEIAAYAGNDALCYRAG 131


>gi|84499809|ref|ZP_00998097.1| hypothetical protein OB2597_07760 [Oceanicola batsensis HTCC2597]
 gi|84392953|gb|EAQ05164.1| hypothetical protein OB2597_07760 [Oceanicola batsensis HTCC2597]
          Length = 237

 Score = 43.9 bits (102), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 29  PKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRST 88
           PKRF+K V + ES G + ++LD R ++TP      V +  LA A+AAEW+AQ + +   T
Sbjct: 6   PKRFWKTVAVTESEGGFGVALDGRPVRTPAKRPLVVPTRALAEAVAAEWEAQEDVLDPRT 65

Query: 89  MHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           M  T   N  ID    L   ++   +  + D+D + Y A+
Sbjct: 66  MPATRGANAAIDK-VALQHAEVAGMLAAYGDSDLLCYRAD 104


>gi|346326534|gb|EGX96130.1| mitochondrial molecular chaperone [Cordyceps militaris CM01]
          Length = 376

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWDAQHETIQR 86
           +RF++ V + E NG  ++ LD R L+ PN    V   +S   LA A+A EWD      Q 
Sbjct: 95  RRFWRDVRVDEVNGALQVLLDARPLRHPNTKEIVRVPLSKPTLAAALAIEWDLLTSAQQA 154

Query: 87  STMHLTAICNTV--------------IDNPNRLTKFDLVQNIINFLDTDTILYHA 127
           +  HL  + + V                     T+  +  +++ +LDTD++L  A
Sbjct: 155 TQQHLIPLTSLVCRALDIAAEDAAAATTGVAAATRTAIANSVLRYLDTDSLLCWA 209


>gi|346976355|gb|EGY19807.1| ATP12 protein [Verticillium dahliae VdLs.17]
          Length = 410

 Score = 43.9 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTP---NGVLFKVSSEPLALAIAAEWDAQHETIQR 86
           +RF+K+V + E +G  ++ LD+R L+ P   N +    S   LA A+A EWD      Q 
Sbjct: 104 RRFWKEVRVEEVDGALQVMLDNRPLRHPGTTNIIRLPTSKPHLASAVAIEWDLLTSAYQA 163

Query: 87  STMHLTAICNTV 98
           +  HL  + + +
Sbjct: 164 TKQHLIPLTSLI 175


>gi|409401831|ref|ZP_11251489.1| ATP12 chaperone protein [Acidocella sp. MX-AZ02]
 gi|409129506|gb|EKM99356.1| ATP12 chaperone protein [Acidocella sp. MX-AZ02]
          Length = 231

 Score = 43.9 bits (102), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+     L  +G + + LD R +K P+G    V+S  LA AIA EW+          +
Sbjct: 2   KRFWTLAAPLPQDGGFRVQLDKRLVKMPSGAPLTVASLKLAEAIAQEWNRTGAEFTPDDL 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            LT +  T  +    L + ++++ +  +   D + Y A 
Sbjct: 62  PLTQMVCTAQER-VALHREEIIRQLAAYGLNDLLCYRAE 99


>gi|258542795|ref|YP_003188228.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01]
 gi|384042716|ref|YP_005481460.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-12]
 gi|384051233|ref|YP_005478296.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-03]
 gi|384054341|ref|YP_005487435.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-07]
 gi|384057575|ref|YP_005490242.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-22]
 gi|384060216|ref|YP_005499344.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-26]
 gi|384063508|ref|YP_005484150.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-32]
 gi|384119518|ref|YP_005502142.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256633873|dbj|BAH99848.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636932|dbj|BAI02901.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639985|dbj|BAI05947.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256643041|dbj|BAI08996.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256646096|dbj|BAI12044.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256649149|dbj|BAI15090.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256652136|dbj|BAI18070.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256655193|dbj|BAI21120.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 255

 Score = 43.9 bits (102), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR--- 86
           KRF+K+  ++     + + LD R ++ P      V+S  LA A+AAEW A  +       
Sbjct: 19  KRFWKQADVVPEGQGFVVQLDGRSIRLPRKTPLCVTSRALADALAAEWQAAGQNADGRFS 78

Query: 87  -STMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            + + LT I  ++I+  P    +  ++++++ +  +D + Y 
Sbjct: 79  PADLPLTGIAGSMIERIPAE--REGVLRSLLAYAGSDLLCYR 118


>gi|71006088|ref|XP_757710.1| hypothetical protein UM01563.1 [Ustilago maydis 521]
 gi|46097385|gb|EAK82618.1| hypothetical protein UM01563.1 [Ustilago maydis 521]
          Length = 1376

 Score = 43.9 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 68/134 (50%), Gaps = 10/134 (7%)

Query: 3    VGKQTTMRYPRLINSIQSCKYSALEKPKR----FYKKVGIL---ESNGDYEISLDHRKLK 55
            +G    +R   L  S +  + +AL + +R    F+K V +      +  Y+I LD R ++
Sbjct: 1110 LGVTPALRQRALHTSARWLEEAALNRAERLKSRFWKTVSLQAPSSRDSGYQILLDGRPIR 1169

Query: 56   TPNG--VLFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQ- 112
            TP+G  ++   + E LA  IA EW  Q + ++  T+ LT++    ++  +   +   +Q 
Sbjct: 1170 TPSGSAIVIPANRELLATCIAQEWCEQGKLLKPHTLPLTSLAARALEGCSNGQESSQIQT 1229

Query: 113  NIINFLDTDTILYH 126
            +++ +L+ +T+ + 
Sbjct: 1230 DLLRYLENETVCFQ 1243


>gi|421852913|ref|ZP_16285596.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
 gi|371478912|dbj|GAB30799.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
          Length = 255

 Score = 43.5 bits (101), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR--- 86
           KRF+K+  ++     + + LD R ++ P      V+S  LA A+AAEW A  +       
Sbjct: 19  KRFWKQADVVPEGQGFVVQLDGRSIRLPRKTPLCVTSRALADALAAEWQAAGQNADGRFS 78

Query: 87  -STMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            + + LT I  ++I+  P    +  ++++++ +  +D + Y 
Sbjct: 79  PADLPLTGIAGSMIERIPAE--REGVLRSLLAYAGSDLLCYR 118


>gi|453086979|gb|EMF15020.1| ATP12-domain-containing protein [Mycosphaerella populorum SO2202]
          Length = 372

 Score = 43.5 bits (101), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 62/116 (53%), Gaps = 14/116 (12%)

Query: 24  SALEKPKRFYKKVGILES-NGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWD-- 78
           SAL+K  RF+K V + E+ +G  +I LD R ++T    +  +  S   LA AIA EWD  
Sbjct: 94  SALQK--RFWKNVAVAETKDGGLQIMLDSRPVRTATKEVLTLPKSKRALAAAIAIEWDQL 151

Query: 79  -AQHETIQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTILYHA 127
            +  + +++  + LT++ +  +D        +   + ++V+  + +L TDT+L  A
Sbjct: 152 VSAQQALKQHYIPLTSLTSRALDIEIADRAGDSTIRENIVKMALRYLATDTLLCWA 207


>gi|254511420|ref|ZP_05123487.1| ATP12 ATPase [Rhodobacteraceae bacterium KLH11]
 gi|221535131|gb|EEE38119.1| ATP12 ATPase [Rhodobacteraceae bacterium KLH11]
          Length = 238

 Score = 43.5 bits (101), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 28  KPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KPKRF+    ++E++G + + LD R++KTP      + +  +A A+AAEW+AQ + +  +
Sbjct: 8   KPKRFWTSSAVVETDGGHTVELDGRRVKTPAKAALVLPTRAMAEAVAAEWEAQEKEVDPT 67

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
           TM  T   N  ID   R    ++   + ++ D+D + Y A 
Sbjct: 68  TMPFTRSANAAIDK-VRHQHREVANMLADYGDSDLLCYRAT 107


>gi|407919161|gb|EKG12416.1| ATP12 ATPase F1F0-assembly protein [Macrophomina phaseolina MS6]
          Length = 365

 Score = 43.5 bits (101), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 64/115 (55%), Gaps = 13/115 (11%)

Query: 24  SALEKPKRFYKKVGILESNGDYEISLDHRKLKTP--NGVLFKVSSEPLALAIAAEWDA-- 79
           SAL+K  RF+++V + ++   +++ LD R ++T   N +    + + LA AIA EWD   
Sbjct: 89  SALQK--RFWREVHVKQTPDGHQVLLDSRPVRTASKNVLTIPPNKQQLAAAIALEWDLLL 146

Query: 80  -QHETIQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTILYHA 127
              + +++  + LT++ +  ID      + +   +  +V+ ++N+L TDT+L  A
Sbjct: 147 NAQQALKQHYIPLTSLTSRAIDIQAADASGDSSIRDSIVKMLMNYLTTDTLLCWA 201


>gi|402820827|ref|ZP_10870390.1| hypothetical protein IMCC14465_16240 [alpha proteobacterium
           IMCC14465]
 gi|402510330|gb|EJW20596.1| hypothetical protein IMCC14465_16240 [alpha proteobacterium
           IMCC14465]
          Length = 234

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           +RFY+ V +   +  + + LD RKL TP   L  +    LA AIA EW      I  S M
Sbjct: 3   RRFYETVSVEAVSEGFIVLLDDRKLMTPAKKLLALPYAKLAEAIAEEWRQVDGEILLSDM 62

Query: 90  HLTAICNTVIDNPNRLTKFDL-VQNIINFLDTDTILYHAN 128
            ++ +  T +D  +    +D   Q   ++ +TD + Y A 
Sbjct: 63  PMSRLVYTALDRVSE--AYDATAQAFASYGETDLLCYRAT 100


>gi|238579423|ref|XP_002389052.1| hypothetical protein MPER_11871 [Moniliophthora perniciosa FA553]
 gi|215450904|gb|EEB89982.1| hypothetical protein MPER_11871 [Moniliophthora perniciosa FA553]
          Length = 217

 Score = 43.5 bits (101), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 16/102 (15%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHETIQRS 87
           KRF+K V I +    Y ++LD R LKTP+G  +L   +   +A  IA EW+     I+  
Sbjct: 18  KRFWKHVDIEKRRDGYVVTLDKRALKTPSGNTLLLPHAKHLVATLIATEWENTETLIKPH 77

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHANF 129
            +               +++  + + ++ ++DTDTI ++ ++
Sbjct: 78  AL--------------PMSREMVSKALLEYMDTDTICFYQDY 105


>gi|359791924|ref|ZP_09294756.1| ATP12 ATPase [Mesorhizobium alhagi CCNWXJ12-2]
 gi|359251987|gb|EHK55287.1| ATP12 ATPase [Mesorhizobium alhagi CCNWXJ12-2]
          Length = 263

 Score = 43.1 bits (100), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 3/123 (2%)

Query: 6   QTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVS 65
           Q  +  P  I   QS   + L  PKRFY +V +  +   + + LD R ++TP   +  + 
Sbjct: 11  QKYLSDPDPIRRAQSQMKTQL--PKRFYNEVSVAPAGEGFGVYLDGRPVRTPGKAVLALP 68

Query: 66  SEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           +E  A  +A E+ AQ E I  STM +  + NT ID         +  ++  F  +D + Y
Sbjct: 69  TEAAAALVAEEFAAQGEKIDPSTMPVYRLVNTAIDG-VAADPAAVRDDVARFASSDLLCY 127

Query: 126 HAN 128
            A+
Sbjct: 128 RAD 130


>gi|118353420|ref|XP_001009978.1| ATP12 chaperone protein [Tetrahymena thermophila]
 gi|89291745|gb|EAR89733.1| ATP12 chaperone protein [Tetrahymena thermophila SB210]
          Length = 258

 Score = 43.1 bits (100), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 7/103 (6%)

Query: 30  KRFYKKVGI------LESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET 83
           K+FYKK  +      + +   Y + LD + ++TP      + +  LA AIA E++ Q+E 
Sbjct: 22  KKFYKKATVKKLENPVHNKHLYGVFLDGKLIRTPLKNKLALPTYELAFAIAHEFNMQNEY 81

Query: 84  IQRSTMHLTAICNTVIDNPNRLTKFDLVQNIIN-FLDTDTILY 125
           ++ +TM +T+I  T +D   +      +++ +N F+  DTIL+
Sbjct: 82  LKPATMPITSISRTTVDMDIQENIRQHIEDSVNQFVRNDTILF 124


>gi|403366146|gb|EJY82866.1| ATP12 chaperone protein [Oxytricha trifallax]
          Length = 296

 Score = 43.1 bits (100), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 37/143 (25%)

Query: 20  SCKYSALEKP-------------KRFYKKVGILES---------NGDYEISLDHRKLK-- 55
           S +Y +++KP             KRFYKKV I+E          N   E+S D+  L   
Sbjct: 2   SKRYFSIQKPGSFFPQIPTGQRIKRFYKKVDIVEHPLQKEAPKLNPGQEVSFDNLSLSHK 61

Query: 56  --------TPNGVLFK----VSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPN 103
                    P   +FK    + ++ LA+A+A EW+ Q E+I   ++HL       I + N
Sbjct: 62  YWAVTLDGRPTKTMFKDNLFIPTKALAIALAEEWEGQKESINLKSLHLNNFMAKTIRSQN 121

Query: 104 RLTKFD-LVQNIINFLDTDTILY 125
                D + + +   L+ D I +
Sbjct: 122 DPIIQDYMKEELTAILENDQICF 144


>gi|190345211|gb|EDK37059.2| hypothetical protein PGUG_01157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 348

 Score = 43.1 bits (100), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 17/116 (14%)

Query: 26  LEKP-KRFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWDAQ 80
           LEK   RF++KV     ++   YE+ LD + LKTP G    V  + + LA  IA EW   
Sbjct: 56  LEKTLSRFWEKVDAKYNDATNSYEVQLDGKTLKTPLGYKLAVPATKKQLAHLIAHEWANV 115

Query: 81  HE-TIQRSTMHLTAICNTVID-------NPNRLTKF----DLVQNIINFLDTDTIL 124
            E  I+  ++ LT++ +  ID       + + + K     D+  N++ +LDTDT L
Sbjct: 116 PELKIKHGSLPLTSLASRAIDLQNTNEGDSDAIAKVGRLEDIRLNLLKYLDTDTCL 171


>gi|403362409|gb|EJY80932.1| ATP12 chaperone protein [Oxytricha trifallax]
          Length = 530

 Score = 42.7 bits (99), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 23/100 (23%)

Query: 27  EKPKRFYKKVGILES---------NGDYEISLDHRKLK----------TPNGVLFK---- 63
           ++ +RFYKKV I+E          N   E+S D+  L            P   +FK    
Sbjct: 256 QRIRRFYKKVDIVEHPLQQEAPKLNPGQEVSFDNLSLSHKYWAVTLDGKPTKTMFKDNLF 315

Query: 64  VSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPN 103
           + ++ LA+A+A EW+ Q E+I   ++HL       I + N
Sbjct: 316 IPTKALAIALAEEWEGQKESINLKSLHLNNFMAKTIRSQN 355


>gi|146423709|ref|XP_001487780.1| hypothetical protein PGUG_01157 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 348

 Score = 42.7 bits (99), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 16/110 (14%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWDAQHE-TIQ 85
           RF++KV     ++   YE+ LD + LKTP G    V  + + LA  IA EW    E  I+
Sbjct: 62  RFWEKVDAKYNDATNSYEVQLDGKTLKTPLGYKLAVPATKKQLAHLIAHEWANVPELKIK 121

Query: 86  RSTMHLTAICNTVID-------NPNRLTKF----DLVQNIINFLDTDTIL 124
             ++ LT++ +  ID       + + + K     D+  N++ +LDTDT L
Sbjct: 122 HGSLPLTSLASRAIDLQNTNEGDSDAIAKVGRLEDIRLNLLKYLDTDTCL 171


>gi|326388338|ref|ZP_08209934.1| ATP12 ATPase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207070|gb|EGD57891.1| ATP12 ATPase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 235

 Score = 42.4 bits (98), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFY+   +      + + LD R +KT  G    + +  L  A+ AEW  Q E I  +  
Sbjct: 2   KRFYRDASLGRDEHGFRVLLDGRAVKTQGGRPQALPTSALGDALVAEWADQGEEIDTTRF 61

Query: 90  HLTAICNTVID----NPNRLTKFDLVQNIINFLDTDTILYHAN 128
               + +  +D    +P      + +  ++ + DTDT+ Y A 
Sbjct: 62  AFRDMADHALDIVAADPA-----EAIAGLLPYADTDTLCYRAE 99


>gi|226292772|gb|EEH48192.1| ATP12 chaperone protein [Paracoccidioides brasiliensis Pb18]
          Length = 308

 Score = 42.4 bits (98), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 11/109 (10%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD---AQHETI 84
           +RF+K V + E    +++ LD   ++TP   +  +  S+P LA AIA EWD   + H+ +
Sbjct: 22  RRFWKDVHVKEVADGHQVLLDSFPVRTPEKKIITIPPSKPHLAHAIALEWDLLVSSHQAL 81

Query: 85  QRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDTILYHA 127
           +   + LTA+     D            + ++++  + +LDTDT+L  A
Sbjct: 82  KHHLIPLTALTARAQDVALQDAAGQDTIRNEILKTTMRYLDTDTLLTWA 130


>gi|70982310|ref|XP_746683.1| mitochondrial molecular chaperone (Atp12) [Aspergillus fumigatus
           Af293]
 gi|66844307|gb|EAL84645.1| mitochondrial molecular chaperone (Atp12), putative [Aspergillus
           fumigatus Af293]
 gi|159123071|gb|EDP48191.1| ATP12 ATPase [Aspergillus fumigatus A1163]
          Length = 375

 Score = 42.4 bits (98), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 11/94 (11%)

Query: 42  NGDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWDAQHETIQRSTMH------LTA 93
           +G+Y++ LD R ++TP   +  + S++P LA AIA EWD      Q    H      LTA
Sbjct: 110 DGEYQVLLDTRPIRTPTKDILSIPSTKPHLAHAIALEWDVMTSARQALKNHLIPLTSLTA 169

Query: 94  ICNTVIDNPNR---LTKFDLVQNIINFLDTDTIL 124
               +     R    T+  +V+  + +LDTDT+L
Sbjct: 170 RAGDIAQEDARGETTTRDQIVKLAMRYLDTDTLL 203


>gi|255730835|ref|XP_002550342.1| hypothetical protein CTRG_04640 [Candida tropicalis MYA-3404]
 gi|240132299|gb|EER31857.1| hypothetical protein CTRG_04640 [Candida tropicalis MYA-3404]
          Length = 350

 Score = 42.4 bits (98), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 61/129 (47%), Gaps = 18/129 (13%)

Query: 16  NSIQSCKYSALEKPKRFYKKVGILESNGD---YEISLDHRKLKTPNGVLFKV--SSEPLA 70
           ++IQS      +   RF+KK G +  N D   YEI LD + L+TP G   ++  S + LA
Sbjct: 49  SNIQSETNKLAKTGARFWKK-GDVYFNPDTKKYEIQLDGKTLRTPLGFPLELPESKKQLA 107

Query: 71  LAIAAEWDAQHE-TIQRSTMHLTAICNTVID-----------NPNRLTKFDLVQNIINFL 118
             IA EW    +  ++ ST+ LTA+    ID               L   D+   ++ +L
Sbjct: 108 YLIAHEWTHLPDLKVKSSTLPLTALATRAIDLSKHHLSDSDKAKEMLALEDIKLQMLRYL 167

Query: 119 DTDTILYHA 127
           DTDT L  A
Sbjct: 168 DTDTCLIFA 176


>gi|443899193|dbj|GAC76524.1| RNA polymerase subunit K [Pseudozyma antarctica T-34]
          Length = 277

 Score = 42.0 bits (97), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 65/127 (51%), Gaps = 10/127 (7%)

Query: 10  RYPRLINSIQSCKYSALEKPKR----FYKKVGILESNGD---YEISLDHRKLKTPNG--V 60
           R+  L  S  + + +AL++ +R    F+K V +   + +   + + LD+R ++TP G  +
Sbjct: 18  RFAGLHTSRIALEEAALDRAERLKSRFWKTVSLSPPSSECDGFRVLLDNRAIRTPGGQTI 77

Query: 61  LFKVSSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDN-PNRLTKFDLVQNIINFLD 119
           +     E LA  +A EW+ Q + ++   + LT++    +D   +   +  +  +++ +L+
Sbjct: 78  VVPRERELLATCMAQEWNEQDKVLKPHALPLTSLAARALDACSDSSERVGIQADLLRYLE 137

Query: 120 TDTILYH 126
            +TI + 
Sbjct: 138 NETICFQ 144


>gi|402826620|ref|ZP_10875797.1| ATP12 ATPase [Sphingomonas sp. LH128]
 gi|402259854|gb|EJU10040.1| ATP12 ATPase [Sphingomonas sp. LH128]
          Length = 235

 Score = 42.0 bits (97), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 10/106 (9%)

Query: 30  KRFYKKVGILESNGDYEIS-----LDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETI 84
           KRFYK+    ++    E S     LD R ++T  G    V ++ LA A+AAEW  Q E I
Sbjct: 2   KRFYKEATAEQTENGPEDSGWRAVLDGRPIRTAGGRPQVVPTQALAQALAAEWARQGEEI 61

Query: 85  QRSTMHLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
             +T H   + +  ID   P R T   ++  ++ + +TDT+ Y A+
Sbjct: 62  DTATFHYRDLADFAIDAVAPARGT---VIAELLPYAETDTLCYRAD 104


>gi|421849504|ref|ZP_16282483.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus NBRC 101655]
 gi|371459691|dbj|GAB27686.1| ATP synthase F1 mitochondrial assembly chaperone ATP12 [Acetobacter
           pasteurianus NBRC 101655]
          Length = 255

 Score = 42.0 bits (97), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR--- 86
           KRF+K+  ++     + + LD R ++ P      V+S  LA A+AAEW A  +       
Sbjct: 19  KRFWKQADVVPEGQGFVVQLDGRSIRLPRKTPLCVTSRALADALAAEWQAAGQNADGRFS 78

Query: 87  -STMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            + +  T I  ++I+  P    +  ++++++ +  +D + Y 
Sbjct: 79  PADLPFTGIAGSMIERIPAE--REGVLRSLLAYAGSDLLCYR 118


>gi|302419417|ref|XP_003007539.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261353190|gb|EEY15618.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 369

 Score = 41.6 bits (96), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 9   MRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTP---NGVLFKVS 65
           +  P+ I +  S K       +RF+K+V + E +G  ++ LD+R L+ P   N +    S
Sbjct: 83  LEMPQEIRNAASMKGVKGGLKRRFWKEVRVEEVDGALQVMLDNRPLRHPGTTNIIRLPTS 142

Query: 66  SEPLALAIAAEWDAQHETIQRSTMHL----TAICNTV 98
              LA A+A EWD      Q +  HL    + IC  +
Sbjct: 143 KPHLASAVAIEWDLLTSAYQATKQHLIPLTSLICRAI 179


>gi|46129312|ref|XP_389017.1| hypothetical protein FG08841.1 [Gibberella zeae PH-1]
          Length = 365

 Score = 41.6 bits (96), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 15/110 (13%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWD-------- 78
           KRF+K V + E +G  ++ LD R L+ P+    V   ++   LA A+A EWD        
Sbjct: 88  KRFWKDVTVQEVDGALQVFLDTRPLRHPSTKAIVRIPITKPDLASALALEWDLLTSAQDA 147

Query: 79  AQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNI----INFLDTDTIL 124
            +H  I  +++   AI     DN       ++  +I    + +LDTD+IL
Sbjct: 148 TRHHLIPLTSLTCRAIDIAEADNAPGSDISEIRSSIATVLLRYLDTDSIL 197


>gi|408388176|gb|EKJ67866.1| hypothetical protein FPSE_12014 [Fusarium pseudograminearum CS3096]
          Length = 365

 Score = 41.6 bits (96), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 15/110 (13%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWD-------- 78
           KRF+K V + E +G  ++ LD R L+ P+    V   ++   LA A+A EWD        
Sbjct: 88  KRFWKDVTVQEVDGALQVFLDTRPLRHPSTKAIVRIPITKPDLASALALEWDLLTSAQDA 147

Query: 79  AQHETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNI----INFLDTDTIL 124
            +H  I  +++   AI     DN       ++  +I    + +LDTD+IL
Sbjct: 148 TRHHLIPLTSLTCRAIDIAEADNAPGSDISEIRSSIATVLLRYLDTDSIL 197


>gi|296284588|ref|ZP_06862586.1| ATP12 ATPase [Citromicrobium bathyomarinum JL354]
          Length = 233

 Score = 41.6 bits (96), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 1/99 (1%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRF+K+  +    G +++ LD R +KT  G    V +  L   + AEW A  E      +
Sbjct: 2   KRFWKEATLRAVEGGWQVWLDERAVKTRGGAPQVVPTRALGELLRAEWAATGEEFAPEDL 61

Query: 90  HLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            L  + +  ID      +  ++  ++ F D DT+ Y A 
Sbjct: 62  PLRDLADRAIDAARAAPE-PIITRLLGFADGDTLCYRAE 99


>gi|221041318|dbj|BAH12336.1| unnamed protein product [Homo sapiens]
          Length = 109

 Score = 41.6 bits (96), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query: 92  TAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
           T +CNT +DNP +  K  L++  + FLDTDTI Y 
Sbjct: 9   TTLCNTSLDNPTQRNKDQLIRAAVKFLDTDTICYR 43


>gi|327291936|ref|XP_003230676.1| PREDICTED: ATP synthase mitochondrial F1 complex assembly factor
           2-like, partial [Anolis carolinensis]
          Length = 185

 Score = 41.2 bits (95), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query: 92  TAICNTVIDNPNRLTKFDLVQNIINFLDTDTILY 125
           T +CNT +DNP++ TK  +++  + FL+TDTI Y
Sbjct: 5   TTLCNTALDNPSQRTKDQIIRAALKFLETDTICY 38


>gi|68484641|ref|XP_713780.1| hypothetical protein CaO19.3686 [Candida albicans SC5314]
 gi|68484710|ref|XP_713746.1| hypothetical protein CaO19.11170 [Candida albicans SC5314]
 gi|46435257|gb|EAK94643.1| hypothetical protein CaO19.11170 [Candida albicans SC5314]
 gi|46435292|gb|EAK94677.1| hypothetical protein CaO19.3686 [Candida albicans SC5314]
          Length = 403

 Score = 41.2 bits (95), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 20/116 (17%)

Query: 31  RFYKKVGILESNGD---YEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHE-TI 84
           RF+KK G ++ N +   YEI LD + L+TP G  +   ++ + LA  IA EW    +  +
Sbjct: 112 RFWKK-GEVKFNNETQKYEIQLDGKTLRTPLGFPLELPINKKQLAYLIAHEWTHLPDIKV 170

Query: 85  QRSTMHLTAICNTVIDNPNR-------------LTKFDLVQNIINFLDTDTILYHA 127
           + ST+ LTA+    ID   +             L   D+   ++ +LDTDT L  A
Sbjct: 171 KSSTLPLTALATRAIDLSQQHLSDLKTEKAEEMLALEDIKLQMLRYLDTDTCLIFA 226


>gi|255716222|ref|XP_002554392.1| KLTH0F04246p [Lachancea thermotolerans]
 gi|238935775|emb|CAR23955.1| KLTH0F04246p [Lachancea thermotolerans CBS 6340]
          Length = 317

 Score = 41.2 bits (95), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 17/126 (13%)

Query: 16  NSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEP--LALAI 73
           N++Q+    A +  ++F+  V + E +    + LD++ L+TP G    VS +   LAL +
Sbjct: 35  NNLQTETNRASKTLQKFWNDVSVKECDTHLTVMLDNKPLRTPLGNALSVSKDRKLLALLL 94

Query: 74  AAEWDAQHE-TIQRSTMHLTAICNTVID---------NPNRLTKFD-----LVQNIINFL 118
             EW +     I+  ++ +T+I +  ID         +P  + K       + ++++ +L
Sbjct: 95  QNEWSSMSSLAIKPHSLPITSIVSRCIDLEYTAKPGSDPELVAKIGGDRSVISESLLRYL 154

Query: 119 DTDTIL 124
           DTDT++
Sbjct: 155 DTDTLM 160


>gi|398406899|ref|XP_003854915.1| hypothetical protein MYCGRDRAFT_99098 [Zymoseptoria tritici IPO323]
 gi|339474799|gb|EGP89891.1| hypothetical protein MYCGRDRAFT_99098 [Zymoseptoria tritici IPO323]
          Length = 368

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 21/128 (16%)

Query: 24  SALEKPKRFYKKVGILE-SNGDYEISLDHRKLKTPNGVLFKVS--SEPLALAIAAEWD-- 78
           SAL+K  RF+K V + E  +G  ++ LD R ++T +  +  +      LA AIA EW+  
Sbjct: 92  SALQK--RFWKNVHVKEDGDGGLQVLLDTRPVRTADRRILTLPYRKRALAAAIALEWEQL 149

Query: 79  -AQHETIQRSTMHLTAICNTVID----NPNRLTKF--DLVQNIINFLDTDTIL------- 124
            +  + +++  + +T++ +  ID    +    TK    +VQ ++ +L TDT+L       
Sbjct: 150 VSAQQALKQHYVPMTSLTSRAIDIQEADKTGETKVREQVVQMVLRYLSTDTLLCWAPEVN 209

Query: 125 YHANFFLR 132
            H NF ++
Sbjct: 210 IHENFSMQ 217


>gi|238879291|gb|EEQ42929.1| hypothetical protein CAWG_01154 [Candida albicans WO-1]
          Length = 355

 Score = 41.2 bits (95), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 18/115 (15%)

Query: 31  RFYKK--VGILESNGDYEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEWDAQHE-TIQ 85
           RF+KK  V   +    YEI LD + L+TP G  +   ++ + LA  IA EW    +  ++
Sbjct: 64  RFWKKGEVKFNKETQKYEIQLDGKTLRTPLGFPLELPINKKQLAYLIAHEWTHLPDIKVK 123

Query: 86  RSTMHLTAICNTVIDNPNR-------------LTKFDLVQNIINFLDTDTILYHA 127
            ST+ LTA+    ID   +             L   D+   ++ +LDTDT L  A
Sbjct: 124 SSTLPLTALATRAIDLSQQHLSDMKTEKAEEMLALEDIKLQMLRYLDTDTCLIFA 178


>gi|315044001|ref|XP_003171376.1| hypothetical protein MGYG_09102 [Arthroderma gypseum CBS 118893]
 gi|311343719|gb|EFR02922.1| hypothetical protein MGYG_09102 [Arthroderma gypseum CBS 118893]
          Length = 362

 Score = 40.0 bits (92), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 13/97 (13%)

Query: 43  GDYEISLDHRKLKTPNGVLFKV-SSEP-LALAIAAEWD----AQHETIQRSTMHLTAICN 96
           G ++I LD R ++TP   +  V SS+P LA AIA EWD    AQH T +   + +T+I  
Sbjct: 101 GGHQIYLDSRPVRTPEKNILTVPSSKPHLAHAIALEWDLLKTAQHAT-KYHLIPMTSITG 159

Query: 97  TVIDNPNRLTKF------DLVQNIINFLDTDTILYHA 127
              D      K       D+ + ++ +L+TDT+L  A
Sbjct: 160 RAEDIAAEDAKGVTTIRDDITRVMLRYLETDTLLSWA 196


>gi|429861869|gb|ELA36533.1| ATP12 ATPase family protein [Colletotrichum gloeosporioides Nara
           gc5]
          Length = 300

 Score = 39.7 bits (91), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 32  FYKKVGILESNGDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWDAQHETIQRST 88
           F+  V + E +G  +I LD R L+ P     V    S + LA A+A EWD      Q + 
Sbjct: 30  FWNDVSVHEVDGALQIHLDARPLRHPVTKAIVRLPPSKQHLASALAIEWDLLTSAQQATK 89

Query: 89  MHLTAICNTVI--------DNPNRLTKFDLVQNIINFLDTDTILYHA 127
            HL  + + V         D      +  +   ++ +LDTD++L  A
Sbjct: 90  QHLIPLISLVCRALDIAADDAGPAAIRQQIATTVMRYLDTDSLLCWA 136


>gi|254569954|ref|XP_002492087.1| Conserved protein required for assembly of subunits of
           mitochondrial F1F0 ATP synthase [Komagataella pastoris
           GS115]
 gi|238031884|emb|CAY69807.1| Conserved protein required for assembly of subunits of
           mitochondrial F1F0 ATP synthase [Komagataella pastoris
           GS115]
 gi|328351423|emb|CCA37822.1| Protein ATP12, mitochondrial [Komagataella pastoris CBS 7435]
          Length = 325

 Score = 39.7 bits (91), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 55/108 (50%), Gaps = 15/108 (13%)

Query: 32  FYKKVGILESNGDYEISLDHRKLKTP--NGVLFKVSSEPLALAIAAEW-DAQHETIQRST 88
           F++KV + +    + + LD + LKTP  N ++   + + LA  +  EW +  +  ++  +
Sbjct: 52  FWEKVDVAKEKDGFHVRLDGKSLKTPLGNQLVIPSAKKSLAYMVCNEWKNLSNLKVKPHS 111

Query: 89  MHLTAICNTVID--------NPNRLTKF----DLVQNIINFLDTDTIL 124
           + LT++    ID        +   LTK     D+  +++ +LDTDT+L
Sbjct: 112 VPLTSLSTRAIDLGISHAVQDLEALTKLGNIEDIKTDLLRYLDTDTVL 159


>gi|169598848|ref|XP_001792847.1| hypothetical protein SNOG_02231 [Phaeosphaeria nodorum SN15]
 gi|160704480|gb|EAT90443.2| hypothetical protein SNOG_02231 [Phaeosphaeria nodorum SN15]
          Length = 1583

 Score = 39.7 bits (91), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 14/122 (11%)

Query: 16  NSIQSCKYSALEKPKRFYKKVGILESNG--DYEISLDHRKLKTPNGVLFKV-SSEP-LAL 71
            S+ S K  +L K KRF+K   + E++G    ++ LD R ++TP   +  V +S+P LA 
Sbjct: 81  ESVPSNKPKSLLK-KRFWKDSTVKETDGTEGLQVFLDSRPVRTPTKDILTVPASKPQLAT 139

Query: 72  AIAAEWD---AQHETIQRSTMHLTAICNTVID------NPNRLTKFDLVQNIINFLDTDT 122
           AIA EWD   +  + ++   + +T++    +D            + +++  ++ +L TDT
Sbjct: 140 AIALEWDLLLSAQQALRTHYIPMTSLAARALDIEQADAQGKEHVRNEVLNLLMRYLATDT 199

Query: 123 IL 124
           +L
Sbjct: 200 LL 201


>gi|329114606|ref|ZP_08243365.1| ATP12 ATPase [Acetobacter pomorum DM001]
 gi|326696086|gb|EGE47768.1| ATP12 ATPase [Acetobacter pomorum DM001]
          Length = 255

 Score = 39.7 bits (91), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQR--- 86
           KRF+K   +      + + LD R ++ P      V S  LA A+AAEW A  +       
Sbjct: 19  KRFWKLANVTPEEQGFVVQLDGRSIRLPRKTPLCVKSRALADALAAEWQAAGQNADGRFS 78

Query: 87  -STMHLTAICNTVIDN-PNRLTKFDLVQNIINFLDTDTILYH 126
            + + LT I  ++I+  P    +  ++++++ +  +D + Y 
Sbjct: 79  PADLPLTGIAGSMIERIPAE--REGVLRSLLAYAGSDLLSYR 118


>gi|342876648|gb|EGU78231.1| hypothetical protein FOXB_11257 [Fusarium oxysporum Fo5176]
          Length = 367

 Score = 39.3 bits (90), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 15/109 (13%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTP---NGVLFKVSSEPLALAIAAEWD--------A 79
           RF+K V + E +G  ++ LD R L+ P     V   ++   LA A+A EWD         
Sbjct: 90  RFWKDVSVKEVDGALQVFLDTRPLRHPVTKEIVRIPITKPDLASALALEWDLLTSAQDAT 149

Query: 80  QHETIQRSTMHLTAICNTVIDN-PN---RLTKFDLVQNIINFLDTDTIL 124
           +H  I  +++   A+     DN P       +  +   ++ +LDTD+IL
Sbjct: 150 RHHLIPLTSLTCRALDIAAADNTPGGEISEVRNAIATTLLRYLDTDSIL 198


>gi|410080640|ref|XP_003957900.1| hypothetical protein KAFR_0F01680 [Kazachstania africana CBS 2517]
 gi|372464487|emb|CCF58765.1| hypothetical protein KAFR_0F01680 [Kazachstania africana CBS 2517]
          Length = 319

 Score = 39.3 bits (90), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 21/120 (17%)

Query: 26  LEKPKR-FYKKVGILE--SNGDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEWD-A 79
           L+KP R  +K V + +  S   + I LD + +KTP G    V  +  ALA  +  EWD  
Sbjct: 41  LDKPGRKLWKHVSVNDTISQEKFHIQLDGKTIKTPLGNPLAVGKDRDALAYLLMKEWDNL 100

Query: 80  QHETIQRSTMHLTAICNTVID----------NPNRLTKF----DLVQN-IINFLDTDTIL 124
           ++ + +R+++ LT++ +  ID           P+   K     ++++N ++ +LDTDT+L
Sbjct: 101 KNLSSKRNSLPLTSLVSRCIDLEVATNEKSSGPDAAAKIGGGKEVIKNDLLRYLDTDTLL 160


>gi|406695571|gb|EKC98874.1| hypothetical protein A1Q2_06845 [Trichosporon asahii var. asahii
           CBS 8904]
          Length = 241

 Score = 38.9 bits (89), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 47  ISLDHRKLKTPNGVLFKVSSEP--LALAIAAEWDAQHETIQRSTMHL 91
           ++LDHR LKTP G    +  E   LA+ IAAEW+ Q + +++  + L
Sbjct: 55  VTLDHRNLKTPEGAKMVIPKERQLLAMMIAAEWENQDQVLKQYALPL 101


>gi|365760071|gb|EHN01818.1| Atp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 325

 Score = 38.9 bits (89), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 19/114 (16%)

Query: 30  KRFYKKVGILE--SNGDYEISLDHRKLKTP--NGVLFKVSSEPLALAIAAEWDAQHE-TI 84
           ++F++KV +     NG   + LD + +KTP  NG++   +   LA  +  EW      +I
Sbjct: 52  QKFWEKVSLNRDIENGKIALQLDGKTIKTPLGNGIIIDDTRSLLAYLLKLEWSCLPSLSI 111

Query: 85  QRSTMHLTAICNTVID---------NPNRLTKF----DLVQN-IINFLDTDTIL 124
           +  ++ LT++    ID         +P  + K     D+++N ++ +LDTDT+L
Sbjct: 112 KTHSLPLTSLVARCIDLQMTNKPGCSPQLIAKIGGTSDVIRNQLLRYLDTDTLL 165


>gi|367021480|ref|XP_003660025.1| hypothetical protein MYCTH_2297787 [Myceliophthora thermophila ATCC
           42464]
 gi|347007292|gb|AEO54780.1| hypothetical protein MYCTH_2297787 [Myceliophthora thermophila ATCC
           42464]
          Length = 303

 Score = 38.9 bits (89), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 42  NGDYEISLDHRKLKTPN--GVLFKVSSEP-LALAIAAEWDAQHETIQRSTMHLTAI---- 94
            G  EI LD R L+ P    V+   +S+P LA A+A EWD      Q +  HL  +    
Sbjct: 22  TGALEIHLDSRPLRHPTTKAVIRLPASKPDLAHALAIEWDGLTSAQQATKQHLIPLTSLT 81

Query: 95  CNTVIDNPNRLTKFDLVQNIINFLDTDTIL 124
           C  +    +   +  +   ++ +LDTD++L
Sbjct: 82  CRALDIAADPSLRAGIAATVLRYLDTDSLL 111


>gi|401838927|gb|EJT42336.1| ATP12-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 325

 Score = 38.9 bits (89), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 19/114 (16%)

Query: 30  KRFYKKVGILE--SNGDYEISLDHRKLKTP--NGVLFKVSSEPLALAIAAEWDAQHE-TI 84
           ++F++KV +     NG   + LD + +KTP  NG++   +   LA  +  EW      +I
Sbjct: 52  QKFWEKVSLNRDIENGKIALQLDGKTIKTPLGNGIIIDDTRSLLAYLLKLEWSCLPSLSI 111

Query: 85  QRSTMHLTAICNTVID---------NPNRLTKF----DLVQN-IINFLDTDTIL 124
           +  ++ LT++    ID         +P  + K     D+++N ++ +LDTDT+L
Sbjct: 112 KTHSLPLTSLVARCIDLQMTNKPGCSPQLIAKIGGTSDVIRNQLLRYLDTDTLL 165


>gi|350424739|ref|XP_003493896.1| PREDICTED: E3 ubiquitin-protein ligase UHRF1-like [Bombus
           impatiens]
          Length = 741

 Score = 38.5 bits (88), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 26  LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           ++K KR  + +GIL    D    L++RK+  P G +F +  EP  L   +  D QH    
Sbjct: 212 IDKKKRVQELIGILHIGKDQ--PLENRKV-NPKGEIFAIE-EPKFLTDRSPEDEQHMVSS 267

Query: 86  RSTMHLTAICNTVIDNPNR 104
                + A C+  +DNPN+
Sbjct: 268 GKRRRIQAYCDACLDNPNK 286


>gi|320583652|gb|EFW97865.1| F1-ATP synthase assembly protein [Ogataea parapolymorpha DL-1]
          Length = 304

 Score = 38.5 bits (88), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 15/109 (13%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWDAQHE-TIQRS 87
           +F++KV + E +  Y I LD + +KTP G    V  +   LA  +A EW       I+  
Sbjct: 39  KFWEKVDLAEKDDGYHILLDGKSIKTPLGFQLTVPKNKHTLAYLLAHEWKHLPSLQIKPY 98

Query: 88  TMHLTAICNTVID--------NPNRLTKFDLVQN----IINFLDTDTIL 124
            + LT++ +  ID        +   LTK    +N    ++ +LDTDT+L
Sbjct: 99  LVPLTSLVSRCIDLEQSHNKQDAELLTKVGDKENLKALLLRYLDTDTLL 147


>gi|393773263|ref|ZP_10361661.1| ATP12 ATPase [Novosphingobium sp. Rr 2-17]
 gi|392721143|gb|EIZ78610.1| ATP12 ATPase [Novosphingobium sp. Rr 2-17]
          Length = 230

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQRSTM 89
           KRFYK V +   +  +   LD R +KTP G    V ++ LA A+AAEW AQ E I     
Sbjct: 2   KRFYKDVTVASIDDGWRALLDGRGIKTPGGRPQVVPTKALAEALAAEWAAQGEEIDPGAF 61

Query: 90  HLTAICNTVID--NPNRLTKFDLVQNIINFLDTDTILYHAN 128
               + +  ID   P+  T   +V  ++ + +TDT+ Y A+
Sbjct: 62  RYRDLTDFTIDAVAPDPAT---IVAELLPYAETDTLCYRAD 99


>gi|254582364|ref|XP_002497167.1| ZYRO0D16984p [Zygosaccharomyces rouxii]
 gi|186703805|emb|CAQ43494.1| Protein ATP12 [Zygosaccharomyces rouxii]
 gi|238940059|emb|CAR28234.1| ZYRO0D16984p [Zygosaccharomyces rouxii]
          Length = 321

 Score = 38.5 bits (88), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 19/114 (16%)

Query: 30  KRFYKKVGILES--NGDYEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEW-DAQHETI 84
           K+F+ +V + E+  NG   I LD + ++TP G    V  +   LA  +  EW +  H ++
Sbjct: 50  KKFWDQVSVGENVQNGKLVIQLDKKPVRTPLGNHLAVDKDRKILARLLQKEWSNISHGSV 109

Query: 85  QRSTMHLTAICNTVID---------NPNRLTKF-----DLVQNIINFLDTDTIL 124
           +   + LT++    ID         +P+   K      +L  +++ +LDTDTIL
Sbjct: 110 KTHALPLTSLIARCIDLEAANAEGAHPDLKVKIGGNRNELSNSLLRYLDTDTIL 163


>gi|340725067|ref|XP_003400896.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
           UHRF1-like [Bombus terrestris]
          Length = 739

 Score = 38.1 bits (87), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 26  LEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETIQ 85
           ++K KR  + +GIL    D    L++RK+  P G +F +  EP  L   +  D QH    
Sbjct: 212 IDKKKRVQELIGILHIGKDQ--PLENRKV-NPKGEIFAIE-EPKFLKDRSPEDEQHMVSS 267

Query: 86  RSTMHLTAICNTVIDNPNR 104
                + A C+  +DNPN+
Sbjct: 268 GKRRRVQAYCDACLDNPNK 286


>gi|406605656|emb|CCH42972.1| hypothetical protein BN7_2518 [Wickerhamomyces ciferrii]
          Length = 311

 Score = 38.1 bits (87), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 15/112 (13%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEWDA-QHETIQRS 87
           +F+ +V I  +   + I LD++ ++TP G   ++ +    LA  +  EW +  + +I+  
Sbjct: 52  KFWSQVSIESNENHHAIKLDNKTIRTPLGNFLEIPTNRSILAHLLHHEWSSLSNLSIKTH 111

Query: 88  TMHLTAICNTVID-NPNRLTK-----------FDLVQNIINFLDTDTILYHA 127
            + LT++   VID     LTK            D++++++ + DTDT+L  A
Sbjct: 112 NLPLTSLVARVIDLEHANLTKNEELQAKVGIREDIIEDLLRYFDTDTLLVFA 163


>gi|354543871|emb|CCE40593.1| hypothetical protein CPAR2_106280 [Candida parapsilosis]
          Length = 348

 Score = 37.7 bits (86), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 19/117 (16%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWDAQHE-TIQ 85
           RF+ K  +   ++ G YE+ LD + L+TP G+   +  + + LA  IA EW    + +++
Sbjct: 59  RFWDKGHVFHNKNTGRYEVQLDGKTLRTPLGLPLTLPENKKQLAYLIAHEWTHLPKISLK 118

Query: 86  RSTMHLTAICNTVID--------------NPNRLTKFDLVQNIINFLDTDTILYHAN 128
            S + LT +    ID                  L   DL  +++ +LDTDT L  A 
Sbjct: 119 SSALPLTGLAARAIDLGSKSNEKGIEDEGGDGMLPLEDLKLSMLKYLDTDTCLIFAG 175


>gi|171680119|ref|XP_001905005.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939686|emb|CAP64912.1| unnamed protein product [Podospora anserina S mat+]
          Length = 456

 Score = 37.7 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 17/98 (17%)

Query: 43  GDYEISLDHRKLKTPNG---VLFKVSSEPLALAIAAEWD---AQHETIQRSTMHLTAICN 96
           G Y+I LD R L+ P     +   +S   LA A+A EWD   +  E  ++  + LT++  
Sbjct: 187 GAYQIHLDSRPLRHPTTKSIIRIPLSKPQLAHALAVEWDQLLSAQEATKQHLIPLTSLVC 246

Query: 97  TVID----------NPNRLTKFDLVQNIINFLDTDTIL 124
             +D           P  + +  +V  ++ +LDTD++L
Sbjct: 247 RAVDIGAEDAAHPGGPGPIRE-SIVTGMMRYLDTDSLL 283


>gi|404254688|ref|ZP_10958656.1| ATP12 ATPase [Sphingomonas sp. PAMC 26621]
          Length = 230

 Score = 37.7 bits (86), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 6/101 (5%)

Query: 30  KRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHET--IQRS 87
           KRF+K+V +    G   I LD R L+TP  V   + +  LA A+A EW +  E   I   
Sbjct: 2   KRFWKEVAVDAERG---IRLDDRPLRTPGRVPLTLPTAALAEAVAEEWRSVEEGAEIDPR 58

Query: 88  TMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYHAN 128
            M LT + N  ID             +  + ++D + Y A+
Sbjct: 59  AMPLTGLGNAAIDRVGADPAL-FAAGLAQYGESDLLCYRAD 98


>gi|448517960|ref|XP_003867895.1| Atp12 protein [Candida orthopsilosis Co 90-125]
 gi|380352234|emb|CCG22458.1| Atp12 protein [Candida orthopsilosis]
          Length = 348

 Score = 37.4 bits (85), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 19/117 (16%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKV--SSEPLALAIAAEWDAQHE-TIQ 85
           RF+ K  +   +  G +EI LD + L+TP G+   +    + LA  IA EW    + +++
Sbjct: 59  RFWDKGHVFHNQQTGRFEIQLDGKTLRTPLGLPLTLPEKKKQLAYLIAHEWTHLPKISLK 118

Query: 86  RSTMHLTAICNTVIDNPNR--------------LTKFDLVQNIINFLDTDTILYHAN 128
            S + LT +    ID  ++              L   DL  +++ +LDTDT L  A 
Sbjct: 119 SSALPLTGLAARAIDLESKRSQKEVNNDGGEEMLAIEDLKLSMLKYLDTDTCLIFAG 175


>gi|428672182|gb|EKX73096.1| conserved hypothetical protein [Babesia equi]
          Length = 296

 Score = 37.4 bits (85), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 4/103 (3%)

Query: 27  EKPKRFY--KKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQHETI 84
           +KPK     K V I +    + I LD + L TP G      S  LA  I  EW+AQ + +
Sbjct: 40  DKPKYSLCRKSVEIADYEDKFCILLDGKLLSTPFGNDIVTHSRELANHIKLEWEAQIDKL 99

Query: 85  QR-STMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
            R  T+ LT + +  +D  +  +K   + ++++ L TDT+L++
Sbjct: 100 TRFGTVPLTLLLSRTLDFSDY-SKGTHIVDLLDSLQTDTLLFY 141


>gi|345560282|gb|EGX43407.1| hypothetical protein AOL_s00215g143 [Arthrobotrys oligospora ATCC
           24927]
          Length = 384

 Score = 37.4 bits (85), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)

Query: 22  KYSALEKPK--RFYKKVGILESNGDYEISLDHRKLKTP--NGVLFKVSSEPLALAIAAEW 77
           + +A+ KP+  RF++ V +   +G Y+I LD R +KT   N V   V+   LA A+  EW
Sbjct: 82  RQAAIPKPRTERFWEDVHLKVVDGRYQILLDARSIKTSAKNDVSVPVNKPLLAYALQVEW 141

Query: 78  DAQH---ETIQRSTMHLTAICNTVID 100
                  E ++   + LT++ +  ID
Sbjct: 142 ATMRNSKEALKSHFIPLTSLTSRAID 167


>gi|113475536|ref|YP_721597.1| MotA/TolQ/ExbB proton channel [Trichodesmium erythraeum IMS101]
 gi|110166584|gb|ABG51124.1| MotA/TolQ/ExbB proton channel [Trichodesmium erythraeum IMS101]
          Length = 474

 Score = 37.0 bits (84), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 19/116 (16%)

Query: 5   KQTTMRYPRLINSIQSCKYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKV 64
           KQT + + R IN I   + + +E+ K  Y            E+SL   +    NG++F  
Sbjct: 319 KQTKVDFDRFINEISEVQNNFIEEVKEIYS-----------ELSLKSFRDDIKNGIVFA- 366

Query: 65  SSEPLALAIAAEWDAQHETIQRSTMHLTAICNTVIDNPNRLTKF--DLVQNIINFL 118
                   I+++ D    +IQ+ T H+ A  NT+ +   +   F   L  + +NF+
Sbjct: 367 -----GQTISSKLDETENSIQQQTEHIDAGINTLSETNAKFADFLRQLDSSQVNFM 417


>gi|149244532|ref|XP_001526809.1| hypothetical protein LELG_01637 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449203|gb|EDK43459.1| hypothetical protein LELG_01637 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 355

 Score = 37.0 bits (84), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 19/133 (14%)

Query: 14  LINSIQSCKYSALEKPKRFYKKVGI-LESNGD-YEISLDHRKLKTPNGVLFKV--SSEPL 69
           L ++IQS      +  ++F+ K  + L  N + YEI LD + L+TP G    V  + + L
Sbjct: 49  LEHNIQSETNKLAKTGRKFWDKCDVYLNPNTNLYEIQLDGKTLRTPLGFPLTVPKNKKQL 108

Query: 70  ALAIAAEW-DAQHETIQRSTMHLTAICNTVIDNPNR--------------LTKFDLVQNI 114
           A  I+ EW +  + +++ S + LT +    ID   R              +   DL +++
Sbjct: 109 AYLISHEWTNLPNISVKSSALPLTGLAARAIDLLKRNEIDEETNEQVKEVIAIKDLKESL 168

Query: 115 INFLDTDTILYHA 127
           + +L+TDT L  A
Sbjct: 169 LRYLNTDTCLIFA 181


>gi|344229006|gb|EGV60892.1| ATP12-domain-containing protein [Candida tenuis ATCC 10573]
          Length = 356

 Score = 36.6 bits (83), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 19/113 (16%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEW-DAQHETIQ 85
           +F+ KV     E    YEI LD + LKTP G    +  +    A  I  EW +  +  IQ
Sbjct: 65  KFWDKVDTSYNEDIKKYEIQLDGKTLKTPLGFPLALPEDKKYFAHLIQHEWSNLPNLKIQ 124

Query: 86  RSTMHLTAICNTVIDNPNRLTKF--------------DLVQNIINFLDTDTIL 124
            ++M LT+I    ID      KF              D+  N++ +LDTDT L
Sbjct: 125 TNSMPLTSIAARSIDLQAAHEKFEEDRDLAAKVGRLEDVKLNMLRYLDTDTCL 177


>gi|50302687|ref|XP_451279.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640410|emb|CAH02867.1| KLLA0A06259p [Kluyveromyces lactis]
          Length = 327

 Score = 36.6 bits (83), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 17/111 (15%)

Query: 31  RFYKKVGILESNGDYEISLDHRKLKTP--NGVLFKVSSEPLALAIAAEW-DAQHETIQRS 87
           +F+++V + E+  +  I LD + L+TP  N +    S + L++ +  EW +    +++  
Sbjct: 51  KFWEQVSLEETPENVTIKLDSKPLRTPLGNPLTLPQSRKLLSVMVLNEWSNLPSLSVKPY 110

Query: 88  TMHLTAICNTVID---------NPNRLTKFD-----LVQNIINFLDTDTIL 124
            + LT++ +  ID         +P  + K       L + ++ +LDTDT+L
Sbjct: 111 VLPLTSLVSRCIDLEKANEDGVDPELVAKIGGNREKLTEGLLRYLDTDTLL 161


>gi|50418327|ref|XP_457773.1| DEHA2C02134p [Debaryomyces hansenii CBS767]
 gi|49653439|emb|CAG85809.1| DEHA2C02134p [Debaryomyces hansenii CBS767]
          Length = 365

 Score = 36.6 bits (83), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 19/113 (16%)

Query: 31  RFYKKVGILESN--GDYEISLDHRKLKTPNGVLFKVSSEPLALA--IAAEW-DAQHETIQ 85
           +F++KV  + +     YE+ LD + LKTP G    + +E   LA  +A EW +     ++
Sbjct: 74  KFWEKVDAVHNKDLNQYEVQLDGKTLKTPLGFPLSLPAEKKQLAHLVAHEWANLPDLKVK 133

Query: 86  RSTMHLTAICNTVID------NPN----RLTKF----DLVQNIINFLDTDTIL 124
            + + LT++ +  ID      N N     ++K     D+  N++ +LDTDT L
Sbjct: 134 INALPLTSLSSRAIDLYNVHNNENIDGEMISKVGNVDDIKVNLLRYLDTDTCL 186


>gi|344229005|gb|EGV60891.1| hypothetical protein CANTEDRAFT_132534 [Candida tenuis ATCC 10573]
          Length = 368

 Score = 36.6 bits (83), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 50/113 (44%), Gaps = 19/113 (16%)

Query: 31  RFYKKVGIL--ESNGDYEISLDHRKLKTPNGVLFKVSSEP--LALAIAAEW-DAQHETIQ 85
           +F+ KV     E    YEI LD + LKTP G    +  +    A  I  EW +  +  IQ
Sbjct: 77  KFWDKVDTSYNEDIKKYEIQLDGKTLKTPLGFPLALPEDKKYFAHLIQHEWSNLPNLKIQ 136

Query: 86  RSTMHLTAICNTVIDNPNRLTKF--------------DLVQNIINFLDTDTIL 124
            ++M LT+I    ID      KF              D+  N++ +LDTDT L
Sbjct: 137 TNSMPLTSIAARSIDLQAAHEKFEEDRDLAAKVGRLEDVKLNMLRYLDTDTCL 189


>gi|425777773|gb|EKV15929.1| Chromosome segregation protein (Pcs1), putative [Penicillium
           digitatum PHI26]
 gi|425782652|gb|EKV20550.1| Chromosome segregation protein (Pcs1), putative [Penicillium
           digitatum Pd1]
          Length = 534

 Score = 36.2 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 7/61 (11%)

Query: 22  KYSALEKPKRFYKKVGILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQH 81
           KY ALE   R  +++GI+E+N + E      KL+  N ++ K S+E L  ++ AE DAQ 
Sbjct: 281 KYDALESKFRNLREIGIVEANTNME------KLRKQNEIVTKASNE-LVSSLRAEMDAQR 333

Query: 82  E 82
           +
Sbjct: 334 K 334


>gi|150864752|ref|XP_001383719.2| F1-ATP synthase assembly protein [Scheffersomyces stipitis CBS
           6054]
 gi|149386008|gb|ABN65690.2| F1-ATP synthase assembly protein, partial [Scheffersomyces stipitis
           CBS 6054]
          Length = 301

 Score = 35.8 bits (81), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 21/115 (18%)

Query: 31  RFYKKVGI-LESNGD-YEISLDHRKLKTPNG--VLFKVSSEPLALAIAAEW-DAQHETIQ 85
           +F++KV    ++  D YE+ LD + LKTP G  +    S + LA  IA EW +     I+
Sbjct: 28  KFWEKVDTHYDATKDLYEVQLDGKTLKTPLGFPLALPSSKKQLAYLIANEWANLPDLKIK 87

Query: 86  RSTMHLTAICNTVIDNPN---------------RLTKFDLVQ-NIINFLDTDTIL 124
            + M LT+I    ID  N               ++   D ++ N++ +LDTDT L
Sbjct: 88  TNMMPLTSIAARSIDLINIHEKEAGSEKNEMIAKVGDLDDIKFNMLRYLDTDTCL 142


>gi|108755244|emb|CAK32564.1| hypothetical protein 10D02-30 [uncultured organism]
          Length = 245

 Score = 35.4 bits (80), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 10/106 (9%)

Query: 30  KRFYKKV---------GILESNGDYEISLDHRKLKTPNGVLFKVSSEPLALAIAAEWDAQ 80
           KRFY++          G       + + LD R +KTP      + S  LA A+AAEW AQ
Sbjct: 7   KRFYERAAAEPCPPSEGGTRGGDGFRVVLDGRPIKTPAKADLVLPSLALAEAVAAEWQAQ 66

Query: 81  HETIQRSTMHLTAICNTVIDNPNRLTKFDLVQNIINFLDTDTILYH 126
              ++  ++ LT +  T ID      +  +V+ +  +   D + Y 
Sbjct: 67  GAEVEVRSLALTGLAWTAIDRVGS-DRARVVEEVAAYAAHDLVCYR 111


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.136    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,012,737,878
Number of Sequences: 23463169
Number of extensions: 71775424
Number of successful extensions: 170520
Number of sequences better than 100.0: 627
Number of HSP's better than 100.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 169885
Number of HSP's gapped (non-prelim): 635
length of query: 136
length of database: 8,064,228,071
effective HSP length: 101
effective length of query: 35
effective length of database: 9,989,415,298
effective search space: 349629535430
effective search space used: 349629535430
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)