BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy10020
(640 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7TT47|SPG7_RAT Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1
Length = 744
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT----EVVFLHCRVFLHEI 85
GGLGAARVR+ C V++ EI
Sbjct: 383 GGLGAARVRSLFKEARARAPCIVYIDEI 410
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++F
Sbjct: 532 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLF 586
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
Query: 477 LALGFAQYTPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFA 533
L GF+ T + K+ +KEE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+
Sbjct: 512 LTPGFSG-TAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFS 570
Query: 534 QYTPSEQKLYNKEETLD 550
Q P +Q L+ KE+ +
Sbjct: 571 QMLPRDQYLFTKEQLFE 587
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++
Sbjct: 532 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQL 585
>sp|Q3ULF4|SPG7_MOUSE Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1
Length = 781
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT----EVVFLHCRVFLHEI 85
GGLGAARVR+ C V++ EI
Sbjct: 383 GGLGAARVRSLFKEARARAPCIVYIDEI 410
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++F
Sbjct: 569 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLF 623
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Query: 485 TPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
T + K+ +KEE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q
Sbjct: 556 TAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQY 615
Query: 542 LYNKEETLD 550
L+ KE+ +
Sbjct: 616 LFTKEQLFE 624
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 45/54 (83%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++
Sbjct: 569 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQL 622
>sp|Q9UQ90|SPG7_HUMAN Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2
Length = 795
Score = 125 bits (314), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 62/88 (70%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT----EVVFLHCRVFLHEI 85
GGLGAARVR+ C V++ EI
Sbjct: 383 GGLGAARVRSLFKEARARAPCIVYIDEI 410
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Query: 485 TPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
T + K+ +KEE VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q
Sbjct: 556 TAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQH 615
Query: 542 LYNKEETLD 550
L+ KE+ +
Sbjct: 616 LFTKEQLFE 624
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++F
Sbjct: 571 VAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLF 623
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 56/95 (58%), Gaps = 17/95 (17%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHA 505
VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++ F A
Sbjct: 571 VAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQL-FERMCMA 629
Query: 506 LVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ 540
L G R S AL F + T Q
Sbjct: 630 LGG----------------RASEALSFNEVTSGAQ 648
>sp|Q920A7|AFG31_MOUSE AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2
Length = 789
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF+++NGSEF+EM
Sbjct: 313 MEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEM 372
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 373 FVGVGPARVRDMFAMARKHAPCILFIDEI 401
Score = 75.9 bits (185), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E++F +
Sbjct: 563 VAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQFLYTREQLFDRMCMML 621
Query: 420 SHRVLRKWVLSSLLT 434
RV + + T
Sbjct: 622 GGRVAEQLFFGQITT 636
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 6/65 (9%)
Query: 486 PSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK 545
PSE K VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +
Sbjct: 557 PSE-----KTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQFLYTR 610
Query: 546 EETLD 550
E+ D
Sbjct: 611 EQLFD 615
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E++
Sbjct: 563 VAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQFLYTREQL 613
>sp|Q9ZM66|FTSH_HELPJ ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain J99) GN=ftsH PE=3 SV=1
Length = 632
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 58/70 (82%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK PE Y NLGAK+PKG LL+GPPG GKTLLAKAVA EA+VPF SM GS FIEM
Sbjct: 183 VEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEM 242
Query: 61 IGGLGAARVR 70
GLGA+RVR
Sbjct: 243 FVGLGASRVR 252
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
VA+HESGHA++ + + + KV+I+PR ALG+ TP E K L K E+ + ID
Sbjct: 431 VAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVL 490
Query: 419 RSHRVLRKWVLSSLLT 434
R + L + T
Sbjct: 491 LGGRAAEEVFLEEIST 506
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 485 TPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
+P E+K+ VA+HESGHA++ + + + KV+I+PR ALG+ TP E K
Sbjct: 424 SPKEKKI-----VAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENK 475
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
VA+HESGHA++ + + + KV+I+PR ALG+ TP E K
Sbjct: 431 VAYHESGHAVISEMTKGSTRVNKVSIIPRGMAALGYTLNTPEENK 475
>sp|P71408|FTSH_HELPY ATP-dependent zinc metalloprotease FtsH OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=ftsH PE=1 SV=2
Length = 632
Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/70 (74%), Positives = 58/70 (82%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK PE Y NLGAK+PKG LL+GPPG GKTLLAKAVA EA+VPF SM GS FIEM
Sbjct: 183 VEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEM 242
Query: 61 IGGLGAARVR 70
GLGA+RVR
Sbjct: 243 FVGLGASRVR 252
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
VA+HESGHA++ + + + KV+I+PR ALG+ TP E K L K E+ + ID
Sbjct: 431 VAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVL 490
Query: 419 RSHRVLRKWVLSSLLT 434
R L + T
Sbjct: 491 LGGRAAEDVFLEEIST 506
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 485 TPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
+P E+K+ VA+HESGHA++ + + + KV+I+PR ALG+ TP E K
Sbjct: 424 SPKEKKI-----VAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 475
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
VA+HESGHA++ + + + KV+I+PR ALG+ TP E K
Sbjct: 431 VAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 475
>sp|Q9Y4W6|AFG32_HUMAN AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2
Length = 797
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 321 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 380
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 381 FVGVGPARVRDLFALARKNAPCILFIDEI 409
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 568 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 623
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 569 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 627
Query: 418 SRSHRV 423
+ RV
Sbjct: 628 TLGGRV 633
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 569 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 621
>sp|Q2KJI7|AFG32_BOVIN AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1
Length = 805
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 322 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 381
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 382 FVGVGPARVRDLFALARKNAPCILFIDEI 410
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY +E+ LD
Sbjct: 569 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQLLD 624
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY +E++ +
Sbjct: 570 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQLLDRMCM 628
Query: 418 SRSHRV 423
+ RV
Sbjct: 629 TLGGRV 634
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY +E++
Sbjct: 570 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQL 622
>sp|Q8JZQ2|AFG32_MOUSE AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1
Length = 802
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 320 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 379
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 380 FVGVGPARVRDLFALARKNAPCILFIDEI 408
Score = 76.3 bits (186), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 567 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 622
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 568 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 626
Query: 418 SRSHRV 423
+ RV
Sbjct: 627 TLGGRV 632
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 568 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 620
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 67/89 (75%), Gaps = 4/89 (4%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P++Y+ LGAK+P+GA+L GPPG GKTLLAKA A EANVPFLS++GSEF+EM
Sbjct: 309 MEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEM 368
Query: 61 IGGLGAARVR----TEVVFLHCRVFLHEI 85
G+G +RVR T C +F+ EI
Sbjct: 369 FVGVGPSRVRDLFATARKNAPCIIFIDEI 397
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K VA HE+GHA+ GW + + D LLKV+I+PR ALG+A Y P +Q L ++ + LD
Sbjct: 555 KNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQILD 610
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA HE+GHA+ GW + + D LLKV+I+PR ALG+A Y P +Q L ++ +I + +
Sbjct: 558 VAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQILDQMGMAL 616
Query: 420 SHRV 423
+ RV
Sbjct: 617 AGRV 620
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHA 505
VA HE+GHA+ GW + + D LLKV+I+PR ALG+A Y P +Q L ++ ++ + G A
Sbjct: 558 VAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQI-LDQMGMA 615
Query: 506 LVG 508
L G
Sbjct: 616 LAG 618
>sp|A6LD25|FTSH_PARD8 ATP-dependent zinc metalloprotease FtsH OS=Parabacteroides
distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152)
GN=ftsH PE=3 SV=1
Length = 684
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V +LK PE Y LG K+PKGALL+GPPG GKTLLAKAVA EANVPF S++GS+F+EM
Sbjct: 210 EIVSFLKNPEKYTELGGKIPKGALLVGPPGTGKTLLAKAVAGEANVPFFSLSGSDFVEMF 269
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C VF+ EI
Sbjct: 270 VGVGASRVRD--LFRQAKEKSPCIVFIDEI 297
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
+A HE+GHA + WLL H + L+KVTIVPR ALG A Y P E+++ +E++ + +
Sbjct: 456 IANHEAGHATLSWLLEHANPLVKVTIVPRGK-ALGAAWYLPEERQITTREQLQDEMCATL 514
Query: 420 SHRVLRKWVLSSLLT 434
R + VL + T
Sbjct: 515 GGRAAEELVLGKIST 529
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
+A HE+GHA + WLL H + L+KVTIVPR ALG A Y P E+++ +E+ D
Sbjct: 456 IANHEAGHATLSWLLEHANPLVKVTIVPRGK-ALGAAWYLPEERQITTREQLQD 508
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+A HE+GHA + WLL H + L+KVTIVPR ALG A Y P E+++ +E++
Sbjct: 456 IANHEAGHATLSWLLEHANPLVKVTIVPRGK-ALGAAWYLPEERQITTREQL 506
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P+ YQ LG +PKG LL+GPPG GKTLLA+AVA EA VPF SM+GSEF+EMI
Sbjct: 211 EIVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGEAGVPFFSMSGSEFVEMI 270
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F C +F+ E+
Sbjct: 271 VGVGAARVRE--LFQQAKKEAPCIIFVDEL 298
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF--SPI 415
R+VA+HESGHAL+G LLP D + KVTI+PR ALG TP + + YN E + S I
Sbjct: 454 RRVAYHESGHALLGLLLPEADPVHKVTIIPRGQ-ALGVTYQTPEDDR-YNYTERYLRSRI 511
Query: 416 DTSRSHRVLRKWVLSSLLT 434
+ R + V ++ T
Sbjct: 512 TAALGGRAAEELVFGTVTT 530
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
R+VA+HESGHAL+G LLP D + KVTI+PR ALG TP + + YN E
Sbjct: 454 RRVAYHESGHALLGLLLPEADPVHKVTIIPRGQ-ALGVTYQTPEDDR-YNYTE 504
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 487 SEQKLYNKEE----VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
+E+KL EE VA+HESGHAL+G LLP D + KVTI+PR ALG TP + +
Sbjct: 442 AERKLLISEEDRRRVAYHESGHALLGLLLPEADPVHKVTIIPRGQ-ALGVTYQTPEDDR- 499
Query: 543 YNKEE 547
YN E
Sbjct: 500 YNYTE 504
>sp|O32617|FTSH_HELFC ATP-dependent zinc metalloprotease FtsH OS=Helicobacter felis
(strain ATCC 49179 / NCTC 12436 / CS1) GN=ftsH PE=3 SV=1
Length = 638
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 58/70 (82%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK P+ Y +LGAK+PKG LL+GPPG GKTLLAKAVA EA+VPF SM GS FIEM
Sbjct: 189 VEIVDFLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGEASVPFFSMGGSSFIEM 248
Query: 61 IGGLGAARVR 70
GLGA+RVR
Sbjct: 249 FVGLGASRVR 258
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
VA+HESGHA++ + + + KV+I+PR ALG+ TP E K L K E+ + ID
Sbjct: 437 VAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENKYLMQKHELIAEIDVL 496
Query: 419 RSHRVLRKWVLSSLLT 434
R L + T
Sbjct: 497 LGGRAAEDVFLQEIST 512
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Query: 485 TPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
+P E+K+ VA+HESGHA++ + + + KV+I+PR ALG+ TP E K
Sbjct: 430 SPKEKKI-----VAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 481
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
VA+HESGHA++ + + + KV+I+PR ALG+ TP E K
Sbjct: 437 VAYHESGHAVISEMTKGSARVNKVSIIPRGMAALGYTLNTPEENK 481
>sp|P39925|AFG3_YEAST Mitochondrial respiratory chain complexes assembly protein AFG3
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AFG3 PE=1 SV=1
Length = 761
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P Y LGAK+P+GA+L GPPG GKTLLAKA A EANVPFLS++GSEF+EM
Sbjct: 301 MEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEM 360
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G+GA+RVR +F R I D
Sbjct: 361 FVGVGASRVRD--LFTQARSMAPSIIFID 387
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 28/203 (13%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
R VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +Q L ++E+ H
Sbjct: 553 RSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFR-HRMI 611
Query: 504 HALVGWL-----LPHT-----DALLKVTIVPR---TSLAL----GFAQYTPSEQKLYNKE 546
AL G + P D KVT + TSL + G+ + ++ +
Sbjct: 612 MALGGRVSEELHFPSVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGN-FKVN 670
Query: 547 ETLDPKKEMTVNREQPPSHDKKKRKC---LTE-ISVTTMVLSSLNRRE---KED--RIGE 597
+ K T++ E D R C LT+ + +V L R+E +ED R+
Sbjct: 671 KPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRLLG 730
Query: 598 SQPFRERTLSHQDKIRPGRESNP 620
+PF+ER + + + P + P
Sbjct: 731 PRPFKERNEAFEKYLDPKSNTEP 753
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEI 411
R VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 553 RSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQF 606
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 547
K VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 552 KRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQ 605
>sp|A9GRC9|FTSH1_SORC5 ATP-dependent zinc metalloprotease FtsH 1 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH1 PE=3 SV=1
Length = 619
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK P Y++LG ++P+G LL+GPPG GKTLLA+AVA EANVPF S+N SEF+EM
Sbjct: 176 VEVVDFLKEPSRYRSLGGRIPRGLLLIGPPGTGKTLLARAVAGEANVPFFSLNASEFVEM 235
Query: 61 IGGLGAARVRTEVVFLHCR------VFLHEI 85
GLGAARVR +F R VF+ EI
Sbjct: 236 FVGLGAARVRE--LFEEARKSAPSIVFIDEI 264
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEIFSPID 416
R+VA+HE+GHALV LP D + +V+IV RT ALG P E++L ++EI S +
Sbjct: 421 RRVAYHEAGHALVALALPAADPVERVSIVARTIGALGVTIQVPRDERQLVTEQEIESRVT 480
Query: 417 TSRSHRVLRKWVLSSL 432
R + L +
Sbjct: 481 VMLGGRAAEELALGQV 496
Score = 37.0 bits (84), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEV 497
R+VA+HE+GHALV LP D + +V+IV RT ALG P E++L ++E+
Sbjct: 421 RRVAYHEAGHALVALALPAADPVERVSIVARTIGALGVTIQVPRDERQLVTEQEI 475
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLDPK 552
+ VA+HE+GHALV LP D + +V+IV RT ALG P +++ E+ ++ +
Sbjct: 420 RRRVAYHEAGHALVALALPAADPVERVSIVARTIGALGVTIQVPRDERQLVTEQEIESR 478
>sp|D5D8E3|FTSH_SULMD ATP-dependent zinc metalloprotease FtsH OS=Sulcia muelleri (strain
DMIN) GN=ftsH PE=3 SV=1
Length = 619
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P Y LG K+PKGALL+GPPG GKTLLAKAVA EA VPF S++GS+F+EM
Sbjct: 198 EIVDFLKSPNKYTKLGGKIPKGALLIGPPGTGKTLLAKAVAGEAQVPFFSLSGSDFVEMF 257
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 258 VGVGASRVR 266
Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ +A+HE+GHA++ W++ + ++ ++TI PR +LG A Y P E+++ +++ D
Sbjct: 441 KKRIAYHETGHAIISWIIEYAHSVFQITITPRGQ-SLGAAWYIPEERQITTEDQMKD 496
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEI 411
+++A+HE+GHA++ W++ + ++ ++TI PR +LG A Y P E+++ ++++
Sbjct: 442 KRIAYHETGHAIISWIIEYAHSVFQITITPRGQ-SLGAAWYIPEERQITTEDQM 494
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+++A+HE+GHA++ W++ + ++ ++TI PR +LG A Y P E+++ ++++
Sbjct: 442 KRIAYHETGHAIISWIIEYAHSVFQITITPRGQ-SLGAAWYIPEERQITTEDQM 494
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
ME V++LK+PE + +GAK+PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 240 MEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 299
Query: 61 IGGLGAARVRTEVVF------LHCRVFLHEI 85
G+GA+RVR +F C VF+ EI
Sbjct: 300 FVGVGASRVRD--LFKKAKENAPCIVFVDEI 328
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 344 SSLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ 403
+++T K SLV A+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 473 GTVMTDGKSKSLV----AYHEVGHAVCGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDD 527
Query: 404 -KLYNKEEIFSPIDTSRSHRVLRKWVLS 430
L +K+++F+ I R + +
Sbjct: 528 PTLISKQQLFARIVGGLGGRAAEEIIFG 555
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 22/90 (24%)
Query: 430 SSLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE- 488
+++T K SLV A+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 473 GTVMTDGKSKSLV----AYHEVGHAVCGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDD 527
Query: 489 ------QKLYNK----------EEVAFHES 502
Q+L+ + EE+ F +S
Sbjct: 528 PTLISKQQLFARIVGGLGGRAAEEIIFGDS 557
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ 540
+K VA+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 481 SKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDD 527
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%), Gaps = 4/88 (4%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK E YQ+LG ++PKG LL+GPPG GKTLLAKA+A EA VPF S++GS+F+EM
Sbjct: 265 EVVDFLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSDFVEMF 324
Query: 62 GGLGAARVR---TEVVF-LHCRVFLHEI 85
G+GAARVR T+ V C +F+ E+
Sbjct: 325 VGVGAARVRDMFTQAVNRAPCIIFIDEL 352
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 359 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEIFS 413
+VA+HESGHALV LP+TD + KV+I+PR ALG+ P SE+ L K E+ S
Sbjct: 509 RVAYHESGHALVAAALPNTDPVHKVSIIPRGLAALGYMMQRPESERFLMTKSELES 564
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 489 QKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYN 544
++ N++E VA+HESGHALV LP+TD + KV+I+PR ALG+ P SE+ L
Sbjct: 499 NRVMNEDEKIRVAYHESGHALVAAALPNTDPVHKVSIIPRGLAALGYMMQRPESERFLMT 558
Query: 545 KEE 547
K E
Sbjct: 559 KSE 561
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 445 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEV 497
+VA+HESGHALV LP+TD + KV+I+PR ALG+ P SE+ L K E+
Sbjct: 509 RVAYHESGHALVAAALPNTDPVHKVSIIPRGLAALGYMMQRPESERFLMTKSEL 562
>sp|Q3B6R3|FTSH_PELLD ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum
(strain DSM 273) GN=ftsH PE=3 SV=1
Length = 706
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
ME VD+LK P+ Y LG K+PKG LL+GPPG GKTLLAKAVA EA+VPF S++GS+F+EM
Sbjct: 212 MEVVDFLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEADVPFFSISGSDFVEM 271
Query: 61 IGGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F C +F+ EI
Sbjct: 272 FVGVGAARVRD--LFRQAKEKAPCIIFIDEI 300
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPID 416
R VA+HE+GHA+V W++P D + K++IVPR ALG+ P E + L K E+F+ I
Sbjct: 457 RIVAYHEAGHAIVSWMMPENDPVQKISIVPRGMSALGYTMNIPLEDRYLMTKRELFARIC 516
Query: 417 TSRSHRVLRKWVLSSLLT 434
R+ + V + T
Sbjct: 517 GLLGGRIAEESVFGEIST 534
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
R VA+HE+GHA+V W++P D + K++IVPR ALG+ P E +
Sbjct: 457 RIVAYHEAGHAIVSWMMPENDPVQKISIVPRGMSALGYTMNIPLEDR 503
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 488 EQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
+ K+ N +E VA+HE+GHA+V W++P D + K++IVPR ALG+ P E +
Sbjct: 447 KNKVINPKEKRIVAYHEAGHAIVSWMMPENDPVQKISIVPRGMSALGYTMNIPLEDR 503
>sp|Q1RGP0|FTSH_RICBR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia bellii
(strain RML369-C) GN=ftsH PE=3 SV=1
Length = 638
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+L+ P +Q LG K+PKG LL+GPPG GKTLLAKA+A EANVPF S++GS+F+EM
Sbjct: 169 EIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMF 228
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C +F+ EI
Sbjct: 229 VGVGASRVRD--MFEQGKRNAPCIIFIDEI 256
Score = 39.3 bits (90), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
K+ A+HE GHALVG +D + K TI+PR ALG P +
Sbjct: 411 KKLTAYHEGGHALVGLYCLASDPIHKATIIPR-GRALGMVMRLPENDRF 458
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 405
A+HE GHALVG +D + K TI+PR ALG P +
Sbjct: 415 AYHEGGHALVGLYCLASDPIHKATIIPR-GRALGMVMRLPENDRF 458
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
A+HE GHALVG +D + K TI+PR ALG P +
Sbjct: 415 AYHEGGHALVGLYCLASDPIHKATIIPR-GRALGMVMRLPENDRF 458
>sp|Q8S2A7|FTSH3_ORYSJ ATP-dependent zinc metalloprotease FTSH 3, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH3 PE=3 SV=1
Length = 802
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P+ Y+ LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFLS++GS+F+EM
Sbjct: 333 MEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEM 392
Query: 61 IGGLGAARVRTEVVFLHCR------VFLHEI 85
G+G +RVR +F R VF+ EI
Sbjct: 393 FVGVGPSRVRN--LFQEARQCSPSIVFIDEI 421
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 342 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
V+ L NK S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 563 VIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 622
Query: 401 SEQKLYNKEEIF 412
++ L KE++F
Sbjct: 623 NDNLLMTKEQLF 634
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 428 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
V+ L NK S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 563 VIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 622
Query: 487 SEQKLYNKEEV 497
++ L KE++
Sbjct: 623 NDNLLMTKEQL 633
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P++ L KE+ D
Sbjct: 582 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNDNLLMTKEQLFD 635
>sp|B3DV46|FTSH1_METI4 ATP-dependent zinc metalloprotease FtsH 1 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH1 PE=3 SV=1
Length = 636
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/90 (60%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P Y+ LGAK+PKG LL+GPPG GKTLLAKAVA EA VPF S++GSEF+EM
Sbjct: 194 EVVDFLKNPSRYRALGAKIPKGVLLVGPPGTGKTLLAKAVAGEAKVPFFSISGSEFVEMF 253
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F C VF+ E+
Sbjct: 254 VGVGAARVRD--LFGQAKSKAPCIVFIDEL 281
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEETLD 550
+E VA+HE GHALV + H + + K++IVPR ALG+ P+ QK L +K E LD
Sbjct: 436 RERVAYHEVGHALVAFYSEHAEPVRKISIVPRGKSALGYTLQLPTAQKYLLSKSELLD 493
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Query: 359 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDT 417
+VA+HE GHALV + H + + K++IVPR ALG+ P+ QK L +K E+ I
Sbjct: 438 RVAYHEVGHALVAFYSEHAEPVRKISIVPRGKSALGYTLQLPTAQKYLLSKSELLDRICV 497
Query: 418 SRSHRVLRKWVLSSLLTVN----KFASLVCRQV 446
+ R + + + T + A+ + RQ+
Sbjct: 498 AMGGRAAEELIYGDITTGAENDLEVATTIARQM 530
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 445 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV 497
+VA+HE GHALV + H + + K++IVPR ALG+ P+ QK L +K E+
Sbjct: 438 RVAYHEVGHALVAFYSEHAEPVRKISIVPRGKSALGYTLQLPTAQKYLLSKSEL 491
>sp|Q68XR9|FTSH_RICTY ATP-dependent zinc metalloprotease FtsH OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=ftsH PE=3 SV=1
Length = 637
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+L+ P +Q LG K+PKG LL+GPPG GKTLLAKA+A EANVPF S++GS+F+EM
Sbjct: 169 EIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMF 228
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C +F+ EI
Sbjct: 229 VGVGASRVRD--MFEQGKRNAPCIIFIDEI 256
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEIFSPID 416
R A+HE GHALVG P + K TI+PR + ALG Q P +++ N+E++ S I
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIA 470
Query: 417 TSRSHRVLRKWVLS 430
+ RV + +
Sbjct: 471 VYMAGRVAEEIIFG 484
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEV 497
R A+HE GHALVG P + K TI+PR + ALG Q P +++ N+E++
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQM 465
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEE 547
A+HE GHALVG P + K TI+PR + ALG Q P +++ N+E+
Sbjct: 415 AYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQ 464
>sp|Q9ZEA2|FTSH_RICPR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia prowazekii
(strain Madrid E) GN=ftsH PE=3 SV=1
Length = 637
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+L+ P +Q LG K+PKG LL+GPPG GKTLLAKA+A EANVPF S++GS+F+EM
Sbjct: 169 EIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMF 228
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C +F+ EI
Sbjct: 229 VGVGASRVRD--MFEQGKRNAPCIIFIDEI 256
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEIFSPID 416
R A+HE GHALVG P + K TI+PR + ALG Q P +++ N+E++ S I
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIA 470
Query: 417 TSRSHRVLRKWVLS 430
+ RV + +
Sbjct: 471 VYMAGRVAEEIIFG 484
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEV 497
R A+HE GHALVG P + K TI+PR + ALG Q P +++ N+E++
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQM 465
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLDPK----- 552
A+HE GHALVG P + K TI+PR + ALG Q P + E ++
Sbjct: 415 AYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIAVYM 473
Query: 553 -----KEMTVNREQPPSHDKKKRKCLTEIS---VTTMVLSSL 586
+E+ R + S K T I+ VT LS L
Sbjct: 474 AGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDL 515
>sp|Q0DHL4|FTSH8_ORYSJ ATP-dependent zinc metalloprotease FTSH 8, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH8 PE=3 SV=1
Length = 822
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P+ Y+ LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFLS++GS+F+EM
Sbjct: 348 MEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEM 407
Query: 61 IGGLGAARVRTEVVFLHCR------VFLHEI 85
G+G +RVR +F R +F+ EI
Sbjct: 408 FVGVGPSRVRN--LFQEARQCAPSIIFIDEI 436
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 342 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
++ L NK S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 578 IIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 637
Query: 401 SEQKLYNKEEIF 412
+E L KE++F
Sbjct: 638 NENLLMTKEQLF 649
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 428 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
++ L NK S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 578 IIGGLEKKNKVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 637
Query: 487 SEQKLYNKEEV 497
+E L KE++
Sbjct: 638 NENLLMTKEQL 648
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P+E L KE+ D
Sbjct: 597 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFD 650
>sp|A6QBN8|FTSH_SULNB ATP-dependent zinc metalloprotease FtsH OS=Sulfurovum sp. (strain
NBC37-1) GN=ftsH PE=3 SV=1
Length = 671
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK PE Y LGAK+PKG LL+GPPG GKTLLAKAVA EA+VPF S++GS FIEM
Sbjct: 198 EIVDFLKFPERYIELGAKIPKGVLLVGPPGTGKTLLAKAVAGEASVPFFSVSGSGFIEMF 257
Query: 62 GGLGAARVRTEVVFLHCR------VFLHEI 85
G+GA+RVR +F + +F+ EI
Sbjct: 258 VGVGASRVRD--LFAQAKKEAPSIIFIDEI 285
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK--LYNKEEIFSPIDT 417
VA+HESGHAL+ L + KV+I+PR ALG+ + P +++ L K E+ + +D
Sbjct: 444 VAYHESGHALMSELSEGATRVTKVSIIPRGLGALGYTLHLPEDEERFLKQKHELMAEVDV 503
Query: 418 SRSHRVLRKWVLSSLLT 434
R + + T
Sbjct: 504 LLGGRAAEDVFIGEIST 520
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 11/73 (15%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHA 505
VA+HESGHAL+ L + KV+I+PR ALG+ + P +++ + K++ HE
Sbjct: 444 VAYHESGHALMSELSEGATRVTKVSIIPRGLGALGYTLHLPEDEERFLKQK---HE---- 496
Query: 506 LVGWLLPHTDALL 518
L+ D LL
Sbjct: 497 ----LMAEVDVLL 505
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKE 546
K+ VA+HESGHAL+ L + KV+I+PR ALG+ + P +++ + K+
Sbjct: 441 KKIVAYHESGHALMSELSEGATRVTKVSIIPRGLGALGYTLHLPEDEERFLKQ 493
>sp|Q92JJ9|FTSH_RICCN ATP-dependent zinc metalloprotease FtsH OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ftsH PE=3 SV=1
Length = 637
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+L+ P +Q LG K+PKG LL+GPPG GKTLLAKA+A EANVPF S++GS+F+EM
Sbjct: 169 EIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMF 228
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C +F+ EI
Sbjct: 229 VGVGASRVRD--MFEQGKRNAPCIIFIDEI 256
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEIFSPID 416
R A+HE GHALVG P + K TI+PR + ALG Q P +++ N+E++ S I
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIA 470
Query: 417 TSRSHRVLRKWVLS 430
+ RV + +
Sbjct: 471 VYMAGRVAEEIIFG 484
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEV 497
R A+HE GHALVG P + K TI+PR + ALG Q P +++ N+E++
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQM 465
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 14/102 (13%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLDPK----- 552
A+HE GHALVG P + K TI+PR + ALG Q P + E ++
Sbjct: 415 AYHEGGHALVGLYCPAASPIHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIAVYM 473
Query: 553 -----KEMTVNREQPPSHDKKKRKCLTEIS---VTTMVLSSL 586
+E+ R + S K T I+ VT LS L
Sbjct: 474 AGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGLSDL 515
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
ME V++LK+PE + +GA++PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 227 MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 286
Query: 61 IGGLGAARVRTEVVF------LHCRVFLHEI 85
G+GA+RVR +F C VF+ EI
Sbjct: 287 FVGVGASRVRD--LFKKAKENAPCIVFVDEI 315
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 344 SSLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SE 402
+++T K SLV A+HE GHA+ G L P D + KVT++PR A G + P +
Sbjct: 460 GTVMTDGKSKSLV----AYHEVGHAICGTLTPGHDPVQKVTLIPRGQ-ARGLTWFIPMDD 514
Query: 403 QKLYNKEEIFSPIDTSRSHRVLRKWVLS 430
L +++++F+ I R + +
Sbjct: 515 PTLISRQQLFARIVGGLGGRAAEEIIFG 542
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 22/89 (24%)
Query: 430 SSLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP--- 486
+++T K SLV A+HE GHA+ G L P D + KVT++PR A G + P
Sbjct: 460 GTVMTDGKSKSLV----AYHEVGHAICGTLTPGHDPVQKVTLIPRGQ-ARGLTWFIPMDD 514
Query: 487 ----SEQKLYNK----------EEVAFHE 501
S Q+L+ + EE+ F E
Sbjct: 515 PTLISRQQLFARIVGGLGGRAAEEIIFGE 543
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-------SEQKLYNK 545
+K VA+HE GHA+ G L P D + KVT++PR A G + P S Q+L+ +
Sbjct: 468 SKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQ-ARGLTWFIPMDDPTLISRQQLFAR 526
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 57/69 (82%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK PE +Q LG +VPKG LL GPPG GKTLLA+AVA EA+VPF S+NGSEFI+M
Sbjct: 211 EIVDFLKTPEKFQKLGGQVPKGVLLNGPPGTGKTLLARAVAGEADVPFFSVNGSEFIQMF 270
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 271 VGVGASRVR 279
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
KE+ A+HE+GH L W L + + KVTI+PR ALG QY P+E +L
Sbjct: 452 KEKTAYHEAGHTLTAWHLEGSHIVHKVTIIPR-GRALGVTQYVPNEDRL 499
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 359 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 405
+ A+HE+GH L W L + + KVTI+PR ALG QY P+E +L
Sbjct: 454 KTAYHEAGHTLTAWHLEGSHIVHKVTIIPR-GRALGVTQYVPNEDRL 499
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 445 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
+ A+HE+GH L W L + + KVTI+PR ALG QY P+E +L
Sbjct: 454 KTAYHEAGHTLTAWHLEGSHIVHKVTIIPR-GRALGVTQYVPNEDRL 499
>sp|Q4UN68|FTSH_RICFE ATP-dependent zinc metalloprotease FtsH OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=ftsH PE=3 SV=1
Length = 635
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+L+ P +Q LG K+PKG LL+GPPG GKTLLAKA+A EANVPF S++GS+F+EM
Sbjct: 169 EIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMF 228
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C +F+ EI
Sbjct: 229 VGVGASRVRD--MFEQGKRNAPCIIFIDEI 256
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEIFSPID 416
R A+HE GHALVG P L K TI+PR + ALG Q P +++ N+E++ S I
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPLHKATIIPRGN-ALGMVQRLPETDEYSQNREQMESSIA 470
Query: 417 TSRSHRVLRKWVLS 430
+ RV + +
Sbjct: 471 VYMAGRVAEEIIFG 484
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEEV 497
R A+HE GHALVG P L K TI+PR + ALG Q P +++ N+E++
Sbjct: 412 RLTAYHEGGHALVGLYCPAASPLHKATIIPRGN-ALGMVQRLPETDEYSQNREQM 465
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-SEQKLYNKEE 547
A+HE GHALVG P L K TI+PR + ALG Q P +++ N+E+
Sbjct: 415 AYHEGGHALVGLYCPAASPLHKATIIPRGN-ALGMVQRLPETDEYSQNREQ 464
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
ME V++LK+PE + +GA++PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 233 MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 292
Query: 61 IGGLGAARVRTEVVF------LHCRVFLHEI 85
G+GA+RVR +F C VF+ EI
Sbjct: 293 FVGVGASRVRD--LFKKAKENAPCIVFVDEI 321
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 344 SSLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ 403
+++T K SLV A+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 466 GTVMTDGKSKSLV----AYHEVGHAICGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDD 520
Query: 404 -KLYNKEEIFSPIDTSRSHRVLRKWVLS 430
L +K+++F+ I R + +
Sbjct: 521 PTLISKQQLFARIVGGLGGRAAEEVIFG 548
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 22/90 (24%)
Query: 430 SSLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE- 488
+++T K SLV A+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 466 GTVMTDGKSKSLV----AYHEVGHAICGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDD 520
Query: 489 ------QKLYNK----------EEVAFHES 502
Q+L+ + EEV F ES
Sbjct: 521 PTLISKQQLFARIVGGLGGRAAEEVIFGES 550
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE 539
+K VA+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 474 SKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSD 519
>sp|Q0TTK8|FTSH_CLOP1 ATP-dependent zinc metalloprotease FtsH OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=ftsH PE=3
SV=1
Length = 717
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+L Y +GAK+PKGALL+GPPG GKTLLAKAVA EA VPF SM+GS+F+EM
Sbjct: 179 VEIVDFLHDTRKYVEIGAKLPKGALLVGPPGTGKTLLAKAVAGEAKVPFFSMSGSDFVEM 238
Query: 61 IGGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F C VF+ EI
Sbjct: 239 FVGMGAARVRD--LFKQAEEKAPCIVFIDEI 267
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
VA+HE GHALV LL +TD + K+TIVPRT ALG+ P E+K L +KEE+ I
Sbjct: 424 VAYHEVGHALVAALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKYLVSKEEMIDQISVM 483
Query: 419 RSHRVLRKWVLSSLLT 434
R + V +S+ T
Sbjct: 484 LGGRAAEEVVFNSITT 499
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 6/67 (8%)
Query: 485 TPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LY 543
+P E+K+ VA+HE GHALV LL +TD + K+TIVPRT ALG+ P E+K L
Sbjct: 417 SPKEKKI-----VAYHEVGHALVAALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKYLV 471
Query: 544 NKEETLD 550
+KEE +D
Sbjct: 472 SKEEMID 478
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV 497
VA+HE GHALV LL +TD + K+TIVPRT ALG+ P E+K L +KEE+
Sbjct: 424 VAYHEVGHALVAALLNNTDPVHKITIVPRTMGALGYTMQLPEEEKYLVSKEEM 476
>sp|Q84WU8|FTSH3_ARATH ATP-dependent zinc metalloprotease FTSH 3, mitochondrial
OS=Arabidopsis thaliana GN=FTSH3 PE=1 SV=1
Length = 809
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 60/70 (85%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P+ Y++LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFLS++GS+F+EM
Sbjct: 335 MEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEM 394
Query: 61 IGGLGAARVR 70
G+G +RVR
Sbjct: 395 FVGVGPSRVR 404
Score = 83.2 bits (204), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 64/114 (56%), Gaps = 6/114 (5%)
Query: 342 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
V+ L N+ S L R VA+HESGHA+VGW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 564 VIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 623
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLT-----VNKFASLVCRQVAFH 449
+E L KE++F + R + ++ + T + K + QVA +
Sbjct: 624 NENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAVY 677
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 41/54 (75%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
VA+HESGHA+VGW L H + LLKVTIVPR + ALGFAQY P+E L KE+ D
Sbjct: 583 VAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFD 636
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 428 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
V+ L N+ S L R VA+HESGHA+VGW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 564 VIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 623
Query: 487 SEQKLYNKEEV 497
+E L KE++
Sbjct: 624 NENLLMTKEQL 634
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 66/90 (73%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P+ Y ++GA++PKG LL+GPPG GKTLLAKAVA EA VPF S++GS+F+EM
Sbjct: 182 EIVDFLKEPKKYLDMGARIPKGILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMF 241
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C +F+ EI
Sbjct: 242 VGVGASRVRD--LFEQAKKNSPCIIFIDEI 269
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLDPKKEMT 556
A+HE+GHA+V PH+D + +++I+PR +A G+ + P Y + L K EM
Sbjct: 428 AYHEAGHAIVMKFSPHSDPVHEISIIPR-GMAGGYTMHLPERDTSYMSKSKL--KDEMV 483
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 406
A+HE+GHA+V PH+D + +++I+PR +A G+ + P Y
Sbjct: 428 AYHEAGHAIVMKFSPHSDPVHEISIIPR-GMAGGYTMHLPERDTSY 472
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
A+HE+GHA+V PH+D + +++I+PR +A G+ + P Y
Sbjct: 428 AYHEAGHAIVMKFSPHSDPVHEISIIPR-GMAGGYTMHLPERDTSY 472
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E +D+LK P Y LGA++PKG LL+GPPG GKTLLAKAVA EA VPF S++GS+F+EM
Sbjct: 182 EVIDFLKNPRKYIELGARIPKGILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMF 241
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F C VF+ EI
Sbjct: 242 VGVGAARVRD--LFDQAKRNAPCVVFIDEI 269
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPIDTSR 419
A+HE+GHA+V ++P ++ + +V+I+PR A G+ Y P E K Y +K ++ I T
Sbjct: 428 AYHEAGHAIVRTMIPDSEPVHEVSIIPR-GYAGGYTMYLPKEDKFYASKSDMMREIVTLL 486
Query: 420 SHRVLRKWVLSSLLT 434
RV K VL + T
Sbjct: 487 GGRVAEKLVLEDVST 501
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 6/60 (10%)
Query: 484 YTPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 543
YT E+KL A+HE+GHA+V ++P ++ + +V+I+PR A G+ Y P E K Y
Sbjct: 419 YTEKEKKL-----TAYHEAGHAIVRTMIPDSEPVHEVSIIPR-GYAGGYTMYLPKEDKFY 472
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
A+HE+GHA+V ++P ++ + +V+I+PR A G+ Y P E K Y
Sbjct: 428 AYHEAGHAIVRTMIPDSEPVHEVSIIPR-GYAGGYTMYLPKEDKFY 472
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V+YLK P +Q LG K+PKG L++GPPG GKTLLAKA+A EA VPF +++GS+F+EM
Sbjct: 166 ELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMF 225
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F H C +F+ EI
Sbjct: 226 VGVGASRVRD--MFEHARKSAPCIIFIDEI 253
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 492 YNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-------SEQKLYN 544
+ KE A+HE+GH ++G L+P D KVTI+PR ALG + P S QKL +
Sbjct: 406 FQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQ-ALGITFFLPESDILSISRQKLES 464
Query: 545 KEETL 549
+ TL
Sbjct: 465 QISTL 469
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GH ++G L+P D KVTI+PR ALG + P L +++++ S I T
Sbjct: 412 AYHEAGHVIIGRLVPDHDPAHKVTIIPRGQ-ALGITFFLPESDILSISRQKLESQISTLY 470
Query: 420 SHRVLRKWVLSS 431
R+ + + S
Sbjct: 471 GGRLAEEIIYGS 482
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
A+HE+GH ++G L+P D KVTI+PR ALG + P L
Sbjct: 412 AYHEAGHVIIGRLVPDHDPAHKVTIIPRGQ-ALGITFFLPESDIL 455
>sp|P57462|FTSH_BUCAI ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsH PE=3
SV=2
Length = 611
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V+YLK P +Q LG K+PKG L++GPPG GKTLLAKA+A EA VPF +++GS+F+EM
Sbjct: 166 ELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMF 225
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F H C +F+ EI
Sbjct: 226 VGVGASRVRD--MFEHSRKSAPCIIFIDEI 253
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 492 YNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-------SEQKLYN 544
+ KE A+HE+GH ++G L+P D KVTI+PR ALG + P S QKL +
Sbjct: 406 FQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGR-ALGVTFFLPESDTLSISRQKLES 464
Query: 545 KEETL 549
+ TL
Sbjct: 465 QISTL 469
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GH ++G L+P D KVTI+PR ALG + P L +++++ S I T
Sbjct: 412 AYHEAGHVIIGRLVPDHDPAHKVTIIPRGR-ALGVTFFLPESDTLSISRQKLESQISTLY 470
Query: 420 SHRV 423
R+
Sbjct: 471 GGRL 474
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
A+HE+GH ++G L+P D KVTI+PR ALG + P L
Sbjct: 412 AYHEAGHVIIGRLVPDHDPAHKVTIIPRGR-ALGVTFFLPESDTL 455
>sp|Q89AF2|FTSH_BUCBP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsH PE=3 SV=1
Length = 610
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V+YLK P +Q LG K+PKG L++GPPG GKTLLAKA+A EA VPF +++GS+F+EM
Sbjct: 166 ELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMF 225
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F H C +F+ EI
Sbjct: 226 VGVGASRVRD--MFEHSRKVAPCIIFIDEI 253
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
KE A+HE+GH +VG L+P D KVTI+PR ALG + P + L
Sbjct: 408 KESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGR-ALGVTFFLPKDDVL 455
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GH +VG L+P D KVTI+PR ALG + P + L NK ++ S I T
Sbjct: 412 AYHEAGHVIVGRLVPEHDPAHKVTIIPRGR-ALGVTFFLPKDDVLSINKNKLESQISTLY 470
Query: 420 SHRV 423
R+
Sbjct: 471 GGRL 474
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
A+HE+GH +VG L+P D KVTI+PR ALG + P + L
Sbjct: 412 AYHEAGHVIVGRLVPEHDPAHKVTIIPRGR-ALGVTFFLPKDDVL 455
>sp|P40341|YTA12_YEAST Mitochondrial respiratory chain complexes assembly protein YTA12
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YTA12 PE=1 SV=2
Length = 825
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P Y+ +GAK+P+GA+L GPPG GKTLLAKA A EA VPF ++GSEF+EM
Sbjct: 361 MEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEM 420
Query: 61 IGGLGAARVRTEVVFLHCR------VFLHEI 85
G+GAARVR +F R VF+ EI
Sbjct: 421 FVGVGAARVRD--LFKTARENAPSIVFIDEI 449
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 5/55 (9%)
Query: 485 TPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE 539
+P E+K+ VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +
Sbjct: 603 SPEEKKV-----VAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGD 652
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P + L ++++ + S
Sbjct: 610 VAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSL 669
Query: 420 SHRV 423
RV
Sbjct: 670 GGRV 673
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE 488
VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +
Sbjct: 610 VAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGD 652
>sp|Q03Z46|FTSH_LEUMM ATP-dependent zinc metalloprotease FtsH OS=Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293 /
NCDO 523) GN=ftsH PE=3 SV=1
Length = 700
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 68/91 (74%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E V++LK P+ + NLGA++PKG LL GPPG GKTLLAKAVA EA+VPF SM+GS+F+EM
Sbjct: 200 VEVVEFLKAPKKFVNLGARIPKGVLLEGPPGTGKTLLAKAVAGEASVPFFSMSGSDFVEM 259
Query: 61 IGGLGAARVRTEVVFLHCR------VFLHEI 85
G+GA+RVR +F + + +F+ EI
Sbjct: 260 FVGVGASRVRD--LFENAKKSAPAIIFIDEI 288
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
R A+HE+GHALVG + + KVTIVPR + G+A TP + YN + + E+
Sbjct: 444 RTTAYHEAGHALVGLVRSEASVVRKVTIVPRGRIG-GYALMTPKNDR-YN---LKYSEAK 498
Query: 504 HALVGWL 510
L G +
Sbjct: 499 EQLAGLM 505
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 407
R A+HE+GHALVG + + KVTIVPR + G+A TP + YN
Sbjct: 444 RTTAYHEAGHALVGLVRSEASVVRKVTIVPRGRIG-GYALMTPKNDR-YN 491
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 544
A+HE+GHALVG + + KVTIVPR + G+A TP + YN
Sbjct: 446 TAYHEAGHALVGLVRSEASVVRKVTIVPRGRIG-GYALMTPKNDR-YN 491
>sp|B3R057|FTSH1_PHYMT ATP-dependent zinc metalloprotease FtsH 1 OS=Phytoplasma mali
(strain AT) GN=ftsH1 PE=3 SV=1
Length = 600
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 68/92 (73%), Gaps = 8/92 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E +D+LK+P+ Y+ +GA +PKG LL GPPG GKTLLAKA+A EA+VPF +++GSEF+EM
Sbjct: 189 ELIDFLKQPQKYETIGAAIPKGVLLEGPPGTGKTLLAKALAGEASVPFYAVSGSEFVEMY 248
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEITI 87
G+GA+RVRT +F C +F+ EI +
Sbjct: 249 VGVGASRVRT--LFKEAKLNAPCVLFIDEIDV 278
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPID 416
R VA+HE+GHA++G L H + K+TI+PR + A G+ P ++ + +++ + + I
Sbjct: 432 RMVAYHEAGHAVIGIKLKHAQKVQKITIIPRGN-AGGYNLMMPEKETFFSSRKRMLAQIQ 490
Query: 417 TSRSHRVLRKWVLSSL 432
+ RV + V +
Sbjct: 491 SFLGGRVAEELVFDDI 506
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
Query: 483 QYTPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
+Y P E+++ VA+HE+GHA++G L H + K+TI+PR + A G+ P ++
Sbjct: 425 KYDPEERRM-----VAYHEAGHAVIGIKLKHAQKVQKITIIPRGN-AGGYNLMMPEKETF 478
Query: 543 YN 544
++
Sbjct: 479 FS 480
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 493
R VA+HE+GHA++G L H + K+TI+PR + A G+ P ++ ++
Sbjct: 432 RMVAYHEAGHAVIGIKLKHAQKVQKITIIPRGN-AGGYNLMMPEKETFFS 480
>sp|Q8VZI8|FTSHA_ARATH ATP-dependent zinc metalloprotease FTSH 10, mitochondrial
OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1
Length = 813
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 68/91 (74%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +L+ P+ Y++LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFLS++GS+F+EM
Sbjct: 340 MEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEM 399
Query: 61 IGGLGAARVRTEVVFLHCR------VFLHEI 85
G+G +RVR +F R +F+ EI
Sbjct: 400 FVGVGPSRVRN--LFQEARQCAPSIIFIDEI 428
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 342 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
V+ L N+ S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 570 VIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 629
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLT-----VNKFASLVCRQVAFH 449
+E L KE++F + R + ++ + T + K + QVA +
Sbjct: 630 NENLLMTKEQLFDMTCMTLGGRAAEQVLIGRISTGAQNDLEKVTKMTYAQVAVY 683
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 40/54 (74%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P+E L KE+ D
Sbjct: 589 VAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFD 642
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 428 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
V+ L N+ S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 570 VIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 629
Query: 487 SEQKLYNKEEV 497
+E L KE++
Sbjct: 630 NENLLMTKEQL 640
>sp|A9FDV9|FTSH2_SORC5 ATP-dependent zinc metalloprotease FtsH 2 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH2 PE=3 SV=1
Length = 607
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/90 (55%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK PE Y+ LG ++P+G LL+GPPG GKTLLA+A+A EA+VPF S +GSEF+EM
Sbjct: 169 EIVDFLKAPERYEKLGGRMPRGVLLVGPPGTGKTLLARAIAGEASVPFFSASGSEFVEMF 228
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F C VF+ E+
Sbjct: 229 VGVGAARVRD--LFSQAREKGACLVFIDEL 256
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 480 GFAQYTPSEQKLYNKEE--VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 537
G A ++L +E+ VA+HE GHAL LLP D + KV+IVPR ALG+ P
Sbjct: 396 GLAGLERRGRRLGAREKLVVAYHEVGHALTASLLPTQDPVRKVSIVPRGPGALGYTIQQP 455
Query: 538 SEQK-LYNKEETLD 550
E + L++++E LD
Sbjct: 456 REDRYLWSRQEILD 469
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
VA+HE GHAL LLP D + KV+IVPR ALG+ P E + L++++EI +
Sbjct: 415 VAYHEVGHALTASLLPTQDPVRKVSIVPRGPGALGYTIQQPREDRYLWSRQEILDRLVVL 474
Query: 419 RSHRVLRKWVLSSLLT 434
RV + + L T
Sbjct: 475 LGGRVAEEEAVGDLST 490
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV 497
VA+HE GHAL LLP D + KV+IVPR ALG+ P E + L++++E+
Sbjct: 415 VAYHEVGHALTASLLPTQDPVRKVSIVPRGPGALGYTIQQPREDRYLWSRQEI 467
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P +Q LG K+PKGALL+GPPG GKTL+A+AVA EA VPF +++GS+F+EM
Sbjct: 165 EVVDFLKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMF 224
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C +F+ EI
Sbjct: 225 VGVGASRVRD--MFEQAKKNAPCIIFIDEI 252
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 493 NKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 537
N+EE A+HE GHA+V +P D + K TIVPR ALG P
Sbjct: 403 NEEEKKLTAYHEGGHAIVALNVPLADPVHKATIVPR-GRALGMVMQLP 449
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
A+HE GHA+V +P D + K TIVPR ALG P
Sbjct: 411 AYHEGGHAIVALNVPLADPVHKATIVPR-GRALGMVMQLP 449
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
A+HE GHA+V +P D + K TIVPR ALG P
Sbjct: 411 AYHEGGHAIVALNVPLADPVHKATIVPR-GRALGMVMQLP 449
>sp|Q1LLA9|FTSH_RALME ATP-dependent zinc metalloprotease FtsH OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=ftsH PE=3 SV=1
Length = 649
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK P+ +Q LG ++P+G LL+GPPG GKTLLA+A+A EA VPF S++GS+F+EM
Sbjct: 183 VELVDFLKDPQKFQKLGGRIPRGVLLVGPPGTGKTLLARAIAGEAKVPFFSISGSDFVEM 242
Query: 61 IGGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F + C VF+ EI
Sbjct: 243 FVGVGAARVRD--MFENAKKQAPCIVFIDEI 271
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK------EEV 497
+ A+HESGHA+V LLP D + KVTI+PR ALG P K Y+K EE+
Sbjct: 427 KATAYHESGHAVVAKLLPKADPVHKVTIMPR-GWALGVTWQLPEHDK-YSKYKDNMLEEI 484
Query: 498 AFHESGHA 505
A G A
Sbjct: 485 AILFGGRA 492
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK 545
++ A+HESGHA+V LLP D + KVTI+PR ALG P K Y+K
Sbjct: 426 RKATAYHESGHAVVAKLLPKADPVHKVTIMPR-GWALGVTWQLPEHDK-YSK 475
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK 408
+ A+HESGHA+V LLP D + KVTI+PR ALG P K Y+K
Sbjct: 427 KATAYHESGHAVVAKLLPKADPVHKVTIMPR-GWALGVTWQLPEHDK-YSK 475
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P+ Y LGA++PKG LL GPPG GKTLLAKAVA EA VPF S++GS+F+EM
Sbjct: 171 EIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMF 230
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C VF+ EI
Sbjct: 231 VGVGASRVRD--LFEQAKKNSPCIVFIDEI 258
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 4/59 (6%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEETLD 550
K A+HE+GHA+VG +LPH D L K+TI+PR A+G+ + P E + YN K E LD
Sbjct: 414 KRVTAYHEAGHAVVGHMLPHMDPLHKITIIPR-GRAMGYTLFLPVEDR-YNISKSEILD 470
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFS 413
R A+HE+GHA+VG +LPH D L K+TI+PR A+G+ + P E + YN K EI
Sbjct: 415 RVTAYHEAGHAVVGHMLPHMDPLHKITIIPR-GRAMGYTLFLPVEDR-YNISKSEILD 470
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 493
R A+HE+GHA+VG +LPH D L K+TI+PR A+G+ + P E + YN
Sbjct: 415 RVTAYHEAGHAVVGHMLPHMDPLHKITIIPR-GRAMGYTLFLPVEDR-YN 462
>sp|B2UE66|FTSH_RALPJ ATP-dependent zinc metalloprotease FtsH OS=Ralstonia pickettii
(strain 12J) GN=ftsH PE=3 SV=1
Length = 714
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V +LK P+ YQ LG K+PKG LL+G PG GKTLLAKAVA EA VPF SM+GS+F+EM
Sbjct: 254 EIVSFLKDPQRYQRLGGKIPKGVLLVGAPGTGKTLLAKAVAGEAGVPFFSMSGSDFVEMF 313
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GAARVR +F C +F+ E+
Sbjct: 314 VGVGAARVRD--LFKQAETKAPCIIFIDEL 341
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEETLD 550
KE +AFHE+GHA+V P D + KV+I+PR ALG+ Q TP+E + L + E LD
Sbjct: 496 KETIAFHEAGHAIVAEHRPLADRVSKVSIIPRGVAALGYTQQTPTEDRYLLKRSELLD 553
Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
+AFHE+GHA+V P D + KV+I+PR ALG+ Q TP+E + L + E+ +D
Sbjct: 499 IAFHEAGHAIVAEHRPLADRVSKVSIIPRGVAALGYTQQTPTEDRYLLKRSELLDRLDVL 558
Query: 419 RSHRVLRKWVLSSLLT 434
R+ + + + T
Sbjct: 559 LGGRIAEQLIFGDVST 574
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
+AFHE+GHA+V P D + KV+I+PR ALG+ Q TP+E +
Sbjct: 499 IAFHEAGHAIVAEHRPLADRVSKVSIIPRGVAALGYTQQTPTEDR 543
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK + + LGAK+PKG LL+GPPG GKTLLAKAVA EA VPF S++GSEF+EM
Sbjct: 175 EVVDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMF 234
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C VF+ EI
Sbjct: 235 VGVGASRVRD--LFEQAKANAPCIVFIDEI 262
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 33/213 (15%)
Query: 198 RELHIVKMETQLRAYESDKKLARKQLIDSVNR-EIAETILLK--NFAHQLIVKCPLMMTY 254
RE + ++ T++ +E + + ++ + NR ++ ++ L++ F Q++V P Y
Sbjct: 280 REQTLNQLLTEMDGFEGNTGII---IVAATNRPDVLDSALMRPGRFDRQVVVDRP---DY 333
Query: 255 SSEEGRN--LNIPASFKMMKKQNFLPQTSTASNVNQSHNIPQEIYDDILNLKLNLEKEVM 312
+ GR LN+ A K + + L + + P D+ NL LN +
Sbjct: 334 A---GRREILNVHARGKTLSQDVDLDKIA--------RRTPGFTGADLSNL-LNEAAILA 381
Query: 313 LRKKLEEEYSIELGSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQVAFHESGHALVGW 372
R+ L E E+ ID RVL + + K +LV A+HE+GHALVG
Sbjct: 382 ARRNLTEISMDEVNDAID-----RVLAGPEKKNRVMSEKRKTLV----AYHEAGHALVGA 432
Query: 373 LLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 405
L+P D + K++I+PR A G +TPSE ++
Sbjct: 433 LMPDYDPVQKISIIPR-GRAGGLTWFTPSEDRM 464
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
VA+HE+GHALVG L+P D + K++I+PR A G +TPSE ++
Sbjct: 420 VAYHEAGHALVGALMPDYDPVQKISIIPR-GRAGGLTWFTPSEDRM 464
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
VA+HE+GHALVG L+P D + K++I+PR A G +TPSE ++
Sbjct: 420 VAYHEAGHALVGALMPDYDPVQKISIIPR-GRAGGLTWFTPSEDRM 464
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 65/90 (72%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V +LK+PE + +GAK+PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 187 EVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 246
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F C VF+ EI
Sbjct: 247 VGVGASRVRD--LFKKAKENSPCIVFIDEI 274
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 115/251 (45%), Gaps = 41/251 (16%)
Query: 189 TKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSVNR-EIAETILLK--NFAHQLI 245
T + RE + ++ T++ +E + + +I + NR ++ + LL+ F Q+
Sbjct: 283 TGIGGGNDEREQTLNQLLTEMDGFEGNTGII---IIAATNRVDVLDAALLRPGRFDRQVT 339
Query: 246 VKCP-----LMMTYSSEEGRNLNIPASFKMMKKQNFLPQTSTASNVNQSHNIPQEIYDDI 300
V P L + + L++ S +++ K+ P S A D+
Sbjct: 340 VDVPDVKGRLEILNVHARNKKLDLSISLELIAKRT--PGFSGA---------------DL 382
Query: 301 LNLKLNLEKEVMLRKKLEEEYSIELGSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQV 360
NL LN E ++ ++ +++ +I S ID S RV+ +L+ S R +
Sbjct: 383 ANL-LN-EAAILTARRRKKQITI---SEIDAS-IDRVIAGMEGKALVD-----SKTKRLI 431
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE-QKLYNKEEIFSPIDTSR 419
A+HE GHA++G LL H D + KVT+VPR A G +TPSE Q L ++ +I + I +
Sbjct: 432 AYHEVGHAIIGTLLKHHDPVQKVTLVPRGQ-AKGLTWFTPSEDQSLISRSQILARIMGAL 490
Query: 420 SHRVLRKWVLS 430
R + V
Sbjct: 491 GGRAAEEVVFG 501
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE-QKLYNKEEV 497
R +A+HE GHA++G LL H D + KVT+VPR A G +TPSE Q L ++ ++
Sbjct: 429 RLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQ-AKGLTWFTPSEDQSLISRSQI 482
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE-QKLYNKEETL 549
K +A+HE GHA++G LL H D + KVT+VPR A G +TPSE Q L ++ + L
Sbjct: 428 KRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQ-AKGLTWFTPSEDQSLISRSQIL 483
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 63/90 (70%), Gaps = 8/90 (8%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E +++LK P +Q LG K+PKG LL G PG GKTLLAKAVA EANVPF S +GSEF+EM
Sbjct: 170 ELIEFLKDPARFQKLGGKIPKGVLLFGSPGTGKTLLAKAVAGEANVPFFSSSGSEFVEMF 229
Query: 62 GGLGAARVRTEVVFLH------CRVFLHEI 85
G+GA+RVR +F H C +F+ EI
Sbjct: 230 VGVGASRVRD--LFDHGRKSAPCLLFIDEI 257
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
+A+HE+GH LV LP D + KV+I+PR ALG+ P E K L +K E+ +
Sbjct: 415 IAYHEAGHTLVAKFLPSADPVHKVSIIPRGP-ALGYTLQLPEEDKYLTSKSELLDKLSIL 473
Query: 419 RSHRVLRKWVLSSLLT-----VNKFASLVCRQV 446
RV + V S + T ++K + R V
Sbjct: 474 FGGRVAEELVFSEITTGAQNDISKATGIAMRMV 506
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEETLD 550
K +A+HE+GH LV LP D + KV+I+PR ALG+ P E K L +K E LD
Sbjct: 412 KNIIAYHEAGHTLVAKFLPSADPVHKVSIIPRGP-ALGYTLQLPEEDKYLTSKSELLD 468
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV 497
+A+HE+GH LV LP D + KV+I+PR ALG+ P E K L +K E+
Sbjct: 415 IAYHEAGHTLVAKFLPSADPVHKVSIIPRGP-ALGYTLQLPEEDKYLTSKSEL 466
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 225,125,415
Number of Sequences: 539616
Number of extensions: 9391891
Number of successful extensions: 46872
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1970
Number of HSP's successfully gapped in prelim test: 1136
Number of HSP's that attempted gapping in prelim test: 41696
Number of HSP's gapped (non-prelim): 5827
length of query: 640
length of database: 191,569,459
effective HSP length: 124
effective length of query: 516
effective length of database: 124,657,075
effective search space: 64323050700
effective search space used: 64323050700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)