Your job contains 1 sequence.
>psy10020
MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM
IGGLGAARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLE
KEVMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLE
RQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSVNREIAETILLKNF
AHQLIVKCPLMMTYSSEEGRNLNIPASFKMMKKQNFLPQTSTASNVNQSHNIPQEIYDDI
LNLKLNLEKEVMLRKKLEEEYSIELGSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQV
AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSRS
HRVLRKWVLSSLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALG
FAQYTPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ
KLYNKEETLDPKKEMTVNREQPPSHDKKKRKCLTEISVTTMVLSSLNRREKEDRIGESQP
FRERTLSHQDKIRPGRESNPRPSAYKAVALPTKLTRLAIS
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy10020
(640 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0024992 - symbol:CG2658 species:7227 "Drosophila m... 325 4.5e-47 2
UNIPROTKB|F1NXP0 - symbol:SPG7 "Uncharacterized protein" ... 304 1.7e-40 2
ZFIN|ZDB-GENE-030131-5391 - symbol:spg7 "spastic parapleg... 301 2.5e-40 2
RGD|727940 - symbol:Spg7 "spastic paraplegia 7 homolog (h... 297 1.2e-39 2
UNIPROTKB|Q7TT47 - symbol:Spg7 "Paraplegin" species:10116... 297 1.2e-39 2
UNIPROTKB|E2R4F3 - symbol:SPG7 "Uncharacterized protein" ... 297 1.2e-39 2
UNIPROTKB|Q9UQ90 - symbol:SPG7 "Paraplegin" species:9606 ... 297 2.0e-39 2
UNIPROTKB|A7E2Z6 - symbol:SPG7 "SPG7 protein" species:991... 297 2.3e-39 2
MGI|MGI:2385906 - symbol:Spg7 "spastic paraplegia 7 homol... 297 3.0e-39 2
WB|WBGene00021425 - symbol:ppgn-1 species:6239 "Caenorhab... 279 4.3e-39 2
ZFIN|ZDB-GENE-070912-46 - symbol:afg3l2 "AFG3 ATPase fami... 274 1.6e-34 2
UNIPROTKB|F1N9N5 - symbol:AFG3L2 "Uncharacterized protein... 267 3.7e-34 2
MGI|MGI:1928277 - symbol:Afg3l1 "AFG3(ATPase family gene ... 272 8.4e-34 2
UNIPROTKB|E1BZ74 - symbol:AFG3L2 "Uncharacterized protein... 267 9.8e-34 2
TAIR|locus:2066128 - symbol:ftsh3 "FTSH protease 3" speci... 250 1.3e-33 3
UNIPROTKB|Q9Y4W6 - symbol:AFG3L2 "AFG3-like protein 2" sp... 265 2.0e-33 2
UNIPROTKB|F1LN92 - symbol:Afg3l2 "Protein Afg3l2" species... 265 2.0e-33 2
MGI|MGI:1916847 - symbol:Afg3l2 "AFG3(ATPase family gene ... 265 2.0e-33 2
UNIPROTKB|E2QYF3 - symbol:AFG3L2 "Uncharacterized protein... 265 2.1e-33 2
RGD|1309722 - symbol:Afg3l1 "AFG3(ATPase family gene 3)-l... 266 2.7e-33 2
WB|WBGene00004978 - symbol:spg-7 species:6239 "Caenorhabd... 261 3.2e-33 2
UNIPROTKB|Q2KJI7 - symbol:AFG3L2 "AFG3-like protein 2" sp... 265 5.4e-33 2
UNIPROTKB|I3LLQ8 - symbol:AFG3L2 "Uncharacterized protein... 256 6.2e-33 2
TAIR|locus:2025052 - symbol:ftsh10 "FTSH protease 10" spe... 245 2.6e-32 3
UNIPROTKB|E1BFQ0 - symbol:E1BFQ0 "Uncharacterized protein... 266 2.9e-32 2
SGD|S000000819 - symbol:AFG3 "Component, with Yta12p, of ... 257 1.6e-31 3
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 229 3.1e-31 2
DICTYBASE|DDB_G0284249 - symbol:DDB_G0284249 "peptidase M... 238 4.0e-31 3
FB|FBgn0036702 - symbol:CG6512 species:7227 "Drosophila m... 257 8.4e-31 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 262 6.8e-30 2
CGD|CAL0004443 - symbol:orf19.2057 species:5476 "Candida ... 249 1.3e-28 2
CGD|CAL0000075 - symbol:AFG3 species:5476 "Candida albica... 247 1.6e-28 3
UNIPROTKB|Q5AJC2 - symbol:AFG3 "Putative uncharacterized ... 247 1.6e-28 3
SGD|S000004695 - symbol:YTA12 "Component of the mitochond... 244 4.2e-28 2
ASPGD|ASPL0000072959 - symbol:AN4557 species:162425 "Emer... 246 1.2e-26 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 230 4.7e-26 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 230 4.7e-26 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 248 7.7e-25 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 244 2.0e-24 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 247 5.1e-24 2
UNIPROTKB|Q9KU86 - symbol:ftsH "ATP-dependent zinc metall... 232 5.3e-24 2
TIGR_CMR|VC_0637 - symbol:VC_0637 "cell division protein ... 232 5.3e-24 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 228 8.2e-24 3
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 232 1.1e-23 2
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 232 1.2e-23 2
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 232 1.2e-23 2
UNIPROTKB|P0AAI3 - symbol:ftsH species:83333 "Escherichia... 236 2.0e-23 2
UNIPROTKB|Q55700 - symbol:ftsH2 "ATP-dependent zinc metal... 238 2.5e-23 3
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 234 3.3e-23 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 234 3.3e-23 2
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 228 3.5e-23 2
TIGR_CMR|CPS_3452 - symbol:CPS_3452 "ATP-dependent metall... 225 5.5e-23 2
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 230 1.9e-22 2
TIGR_CMR|SO_1197 - symbol:SO_1197 "ATP-dependent metallop... 225 3.6e-22 2
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 234 3.6e-21 2
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 234 3.6e-21 2
TIGR_CMR|NSE_0423 - symbol:NSE_0423 "ATP-dependent metall... 239 4.6e-21 2
UNIPROTKB|Q2GFA1 - symbol:ftsH "ATP-dependent zinc metall... 234 5.4e-21 2
TIGR_CMR|ECH_1098 - symbol:ECH_1098 "ATP-dependent metall... 234 5.4e-21 2
UNIPROTKB|Q2GIT4 - symbol:ftsH "ATP-dependent zinc metall... 232 5.6e-21 2
TIGR_CMR|APH_1179 - symbol:APH_1179 "ATP-dependent metall... 232 5.6e-21 2
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 233 7.7e-21 2
ASPGD|ASPL0000029469 - symbol:AN5588 species:162425 "Emer... 218 2.1e-20 2
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 236 3.4e-20 3
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 221 4.5e-20 2
FB|FBgn0034792 - symbol:CG3499 species:7227 "Drosophila m... 216 7.6e-20 2
TAIR|locus:2075581 - symbol:ftsh7 "FTSH protease 7" speci... 217 1.7e-19 3
GENEDB_PFALCIPARUM|PF14_0616 - symbol:PF14_0616 "i-AAA pr... 224 4.0e-19 2
UNIPROTKB|Q8IKI9 - symbol:PF14_0616 "ATP-dependent protea... 224 4.0e-19 2
WB|WBGene00010842 - symbol:ymel-1 species:6239 "Caenorhab... 222 4.5e-19 2
TAIR|locus:2057386 - symbol:ftsh4 "FTSH protease 4" speci... 217 9.6e-19 2
CGD|CAL0002950 - symbol:YME1 species:5476 "Candida albica... 214 1.8e-18 2
DICTYBASE|DDB_G0267492 - symbol:DDB_G0267492 "peptidase M... 202 2.4e-18 3
POMBASE|SPCC965.04c - symbol:SPCC965.04c "mitochondrial i... 220 3.7e-18 2
UNIPROTKB|A6QR12 - symbol:YME1L1 "Uncharacterized protein... 215 5.3e-18 2
TAIR|locus:2154568 - symbol:ftsh9 "FTSH protease 9" speci... 215 7.7e-18 2
TAIR|locus:2163736 - symbol:FTSH11 "FTSH protease 11" spe... 209 8.3e-18 2
UNIPROTKB|J9NRR9 - symbol:YME1L1 "Uncharacterized protein... 215 9.7e-18 2
MGI|MGI:1351651 - symbol:Yme1l1 "YME1-like 1 (S. cerevisi... 215 1.1e-17 2
RGD|620764 - symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" ... 215 1.1e-17 2
UNIPROTKB|G3V886 - symbol:Yme1l1 "YME1-like 1 (S. cerevis... 215 1.1e-17 2
UNIPROTKB|F1PRV6 - symbol:YME1L1 "Uncharacterized protein... 215 1.2e-17 2
UNIPROTKB|F1RVK1 - symbol:YME1L1 "Uncharacterized protein... 215 1.4e-17 2
UNIPROTKB|Q96TA2 - symbol:YME1L1 "ATP-dependent zinc meta... 215 1.4e-17 2
ZFIN|ZDB-GENE-070410-25 - symbol:yme1l1b "YME1-like 1b" s... 212 1.9e-17 2
ZFIN|ZDB-GENE-091113-41 - symbol:yme1l1a "YME1-like 1a" s... 210 2.5e-17 2
SGD|S000006228 - symbol:YME1 "Catalytic subunit of the mi... 212 6.9e-17 2
WB|WBGene00022222 - symbol:Y73B3A.21 species:6239 "Caenor... 216 9.9e-17 1
UNIPROTKB|F1NTK8 - symbol:YME1L1 "Uncharacterized protein... 214 1.9e-16 2
UNIPROTKB|F1P519 - symbol:YME1L1 "Uncharacterized protein... 214 1.9e-16 2
UNIPROTKB|H3BTY6 - symbol:SPG7 "Paraplegin" species:9606 ... 205 1.5e-15 1
DICTYBASE|DDB_G0293388 - symbol:DDB_G0293388 "ATP-depende... 193 2.7e-15 2
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 219 5.8e-15 2
TAIR|locus:2138146 - symbol:FtsHi1 "FTSH inactive proteas... 224 8.7e-15 1
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 202 1.3e-12 2
TAIR|locus:2076929 - symbol:AT3G02450 species:3702 "Arabi... 204 2.5e-12 2
TAIR|locus:2094892 - symbol:EMB2083 "embryo defective 208... 189 1.4e-11 2
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 189 4.1e-11 1
TIGR_CMR|CPS_1795 - symbol:CPS_1795 "ATP-dependent peptid... 159 8.2e-11 2
TIGR_CMR|CPS_1798 - symbol:CPS_1798 "ATP-dependent peptid... 156 2.7e-10 2
WARNING: Descriptions of 388 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 325 (119.5 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 64/69 (92%), Positives = 65/69 (94%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE YQ LGAKVP+GALLLGPPGCGKTLLAKAVATEA VPFLSMNGSEFIEMI
Sbjct: 355 EFVDYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVATEAQVPFLSMNGSEFIEMI 414
Query: 62 GGLGAARVR 70
GGLGAARVR
Sbjct: 415 GGLGAARVR 423
Score = 248 (92.4 bits), Expect = 4.5e-47, Sum P(2) = 4.5e-47
Identities = 51/82 (62%), Positives = 62/82 (75%)
Query: 354 SLVCRQV-AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
SL R+V A+HESGHALVGW+LP++D LLKVTIVPRTSLALGFAQYTPSEQ LY+KEE+F
Sbjct: 598 SLAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQHLYSKEELF 657
Query: 413 SPIDTSRSHRVLRKWVLSSLLT 434
+ + R V + + T
Sbjct: 658 DKMCMALGGRAAENLVFNRITT 679
Score = 241 (89.9 bits), Expect = 2.4e-46, Sum P(2) = 2.4e-46
Identities = 45/60 (75%), Positives = 53/60 (88%)
Query: 491 LYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
L ++ +A+HESGHALVGW+LP++D LLKVTIVPRTSLALGFAQYTPSEQ LY+KEE D
Sbjct: 599 LAERKVIAYHESGHALVGWMLPNSDILLKVTIVPRTSLALGFAQYTPSEQHLYSKEELFD 658
>UNIPROTKB|F1NXP0 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=IEA] [GO:0008089 "anterograde axon cargo
transport" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 OMA:MMDHEAK EMBL:AADN02054132
IPI:IPI00601320 Ensembl:ENSGALT00000010016 Uniprot:F1NXP0
Length = 768
Score = 304 (112.1 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 59/70 (84%), Positives = 64/70 (91%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK P+ Y LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M GSEF+E+I
Sbjct: 296 EFVDYLKNPDRYLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVI 355
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 356 GGLGAARVRS 365
Score = 207 (77.9 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 47/98 (47%), Positives = 62/98 (63%)
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQV-AFHESGHALVGWL 459
+E L+ E IDT + + V++ NK S R+V AFHESGHALVGWL
Sbjct: 499 NEAALHAAREGHKSIDTFNFEYAVER-VIAGTAKRNKILSPEERKVVAFHESGHALVGWL 557
Query: 460 LPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
L HT+A++KV+I PRT+ ALGFAQ P EQ L+ KE++
Sbjct: 558 LEHTEAVMKVSIAPRTNAALGFAQILPREQYLFTKEQL 595
Score = 206 (77.6 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 41/69 (59%), Positives = 51/69 (73%)
Query: 485 TPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
T K+ + EE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P EQ
Sbjct: 529 TAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPREQY 588
Query: 542 LYNKEETLD 550
L+ KE+ L+
Sbjct: 589 LFTKEQLLE 597
Score = 204 (76.9 bits), Expect = 3.5e-40, Sum P(2) = 3.5e-40
Identities = 50/110 (45%), Positives = 66/110 (60%)
Query: 329 IDTSRSHRVLRKWVLSSLLTVNKFASLVCRQV-AFHESGHALVGWLLPHTDALLKVTIVP 387
IDT + + V++ NK S R+V AFHESGHALVGWLL HT+A++KV+I P
Sbjct: 513 IDTFNFEYAVER-VIAGTAKRNKILSPEERKVVAFHESGHALVGWLLEHTEAVMKVSIAP 571
Query: 388 RTSLALGFAQYTPSEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLTVNK 437
RT+ ALGFAQ P EQ L+ KE++ + + RV S +T NK
Sbjct: 572 RTNAALGFAQILPREQYLFTKEQLLERMCMALGGRV------SEAITFNK 615
>ZFIN|ZDB-GENE-030131-5391 [details] [associations]
symbol:spg7 "spastic paraplegia 7" species:7955
"Danio rerio" [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382
ZFIN:ZDB-GENE-030131-5391 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:6687 KO:K09552 OMA:MMDHEAK EMBL:AL954648 EMBL:BX470191
IPI:IPI00483001 RefSeq:XP_001923118.1 UniGene:Dr.105782
Ensembl:ENSDART00000098438 GeneID:794740 KEGG:dre:794740
NextBio:20931970 Uniprot:E7F2S4
Length = 788
Score = 301 (111.0 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
Identities = 58/70 (82%), Positives = 64/70 (91%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK P+ Y LGAKVPKG+LLLGPPGCGKTLLAKAVATEA VPFL+M GSEF+E+I
Sbjct: 314 EFVDYLKNPDRYLQLGAKVPKGSLLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVI 373
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 374 GGLGAARVRS 383
Score = 209 (78.6 bits), Expect = 2.5e-40, Sum P(2) = 2.5e-40
Identities = 48/108 (44%), Positives = 64/108 (59%)
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQVAFHESGHALVGWLL 460
+E L+ E F IDT + + + S+ + R VAFHESGHALVGWLL
Sbjct: 517 NEAALHAAREGFKSIDTFSFEYAVERVIAGSVKKSKILSKEEQRVVAFHESGHALVGWLL 576
Query: 461 PHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHALVG 508
HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++ F AL G
Sbjct: 577 EHTEAVMKVSIAPRTNAALGFAQILPRDQFLFTKEQL-FERMCMALGG 623
Score = 201 (75.8 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 37/55 (67%), Positives = 46/55 (83%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++F
Sbjct: 560 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPRDQFLFTKEQLF 614
Score = 201 (75.8 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 488 EQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 544
+ K+ +KEE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P +Q L+
Sbjct: 550 KSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQILPRDQFLFT 609
Query: 545 KEETLD 550
KE+ +
Sbjct: 610 KEQLFE 615
>RGD|727940 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA;ISO] [GO:0008089
"anterograde axon cargo transport" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 SMART:SM00382 RGD:727940
GO:GO:0016021 GO:GO:0005524 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49 MEROPS:M41.006
CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108 RefSeq:NP_852053.1
UniGene:Rn.16437 ProteinModelPortal:Q7TT47 SMR:Q7TT47 STRING:Q7TT47
PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754 GeneID:353231
KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619 ArrayExpress:Q7TT47
Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 297 (109.6 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 58/70 (82%), Positives = 63/70 (90%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 383 GGLGAARVRS 392
Score = 206 (77.6 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 477 LALGFAQYTPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFA 533
L GF+ T + K+ +KEE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+
Sbjct: 512 LTPGFSG-TAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFS 570
Query: 534 QYTPSEQKLYNKEETLD 550
Q P +Q L+ KE+ +
Sbjct: 571 QMLPRDQYLFTKEQLFE 587
Score = 199 (75.1 bits), Expect = 6.3e-39, Sum P(2) = 6.3e-39
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++F
Sbjct: 532 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLF 586
Score = 194 (73.4 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++ F
Sbjct: 532 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQL-FERMC 590
Query: 504 HALVG 508
AL G
Sbjct: 591 MALGG 595
>UNIPROTKB|Q7TT47 [details] [associations]
symbol:Spg7 "Paraplegin" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 RGD:727940 GO:GO:0016021 GO:GO:0005524
GO:GO:0031966 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 eggNOG:COG0465 GeneTree:ENSGT00530000063070
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111 HSSP:Q9WZ49
MEROPS:M41.006 CTD:6687 KO:K09552 EMBL:AY278739 IPI:IPI00327108
RefSeq:NP_852053.1 UniGene:Rn.16437 ProteinModelPortal:Q7TT47
SMR:Q7TT47 STRING:Q7TT47 PRIDE:Q7TT47 Ensembl:ENSRNOT00000047754
GeneID:353231 KEGG:rno:353231 UCSC:RGD:727940 NextBio:672619
ArrayExpress:Q7TT47 Genevestigator:Q7TT47 Uniprot:Q7TT47
Length = 744
Score = 297 (109.6 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 58/70 (82%), Positives = 63/70 (90%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 383 GGLGAARVRS 392
Score = 206 (77.6 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 477 LALGFAQYTPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFA 533
L GF+ T + K+ +KEE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+
Sbjct: 512 LTPGFSG-TAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFS 570
Query: 534 QYTPSEQKLYNKEETLD 550
Q P +Q L+ KE+ +
Sbjct: 571 QMLPRDQYLFTKEQLFE 587
Score = 199 (75.1 bits), Expect = 6.3e-39, Sum P(2) = 6.3e-39
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++F
Sbjct: 532 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLF 586
Score = 194 (73.4 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++ F
Sbjct: 532 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQL-FERMC 590
Query: 504 HALVG 508
AL G
Sbjct: 591 MALGG 595
>UNIPROTKB|E2R4F3 [details] [associations]
symbol:SPG7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0008089
GO:GO:0030163 GeneTree:ENSGT00530000063070 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 CTD:6687 KO:K09552 OMA:MMDHEAK
EMBL:AAEX03003953 EMBL:AAEX03003954 RefSeq:XP_546777.3
Ensembl:ENSCAFT00000031561 GeneID:489657 KEGG:cfa:489657
NextBio:20862809 Uniprot:E2R4F3
Length = 793
Score = 297 (109.6 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 58/70 (82%), Positives = 63/70 (90%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 383 GGLGAARVRS 392
Score = 207 (77.9 bits), Expect = 1.2e-39, Sum P(2) = 1.2e-39
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 485 TPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
T + K+ +KEE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P +Q
Sbjct: 556 TAKKSKILSKEEQKVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQMLPRDQH 615
Query: 542 LYNKEETLD 550
L+ KE+ +
Sbjct: 616 LFTKEQLFE 624
Score = 201 (75.8 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
Identities = 38/64 (59%), Positives = 49/64 (76%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++F + +
Sbjct: 571 VAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQMLPRDQHLFTKEQLFERMCMAL 630
Query: 420 SHRV 423
RV
Sbjct: 631 GGRV 634
Score = 199 (75.1 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 43/76 (56%), Positives = 54/76 (71%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHA 505
VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++ F A
Sbjct: 571 VAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFAQMLPRDQHLFTKEQL-FERMCMA 629
Query: 506 LVGWLLPHTDALLKVT 521
L G + T + KVT
Sbjct: 630 L-GGRVSETISFNKVT 644
>UNIPROTKB|Q9UQ90 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004222
"metalloendopeptidase activity" evidence=IDA] [GO:0005739
"mitochondrion" evidence=TAS] [GO:0051082 "unfolded protein
binding" evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0008233 "peptidase activity" evidence=TAS]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0007399 GO:GO:0031966 GO:GO:0046872
GO:GO:0008219 GO:GO:0051082 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 EMBL:Y16610 EMBL:AF080525
EMBL:AF080511 EMBL:AF080512 EMBL:AF080513 EMBL:AF080514
EMBL:AF080515 EMBL:AF080516 EMBL:AF080517 EMBL:AF080518
EMBL:AF080519 EMBL:AF080520 EMBL:AF080521 EMBL:AF080522
EMBL:AF080523 EMBL:AF080524 EMBL:BC007692 EMBL:BC035929
EMBL:BC036104 EMBL:BC110530 EMBL:BC110531 IPI:IPI00299010
IPI:IPI00398508 RefSeq:NP_003110.1 RefSeq:NP_955399.1
UniGene:Hs.185597 PDB:2QZ4 PDBsum:2QZ4 ProteinModelPortal:Q9UQ90
SMR:Q9UQ90 IntAct:Q9UQ90 STRING:Q9UQ90 MEROPS:M41.006
PhosphoSite:Q9UQ90 DMDM:116242796 PaxDb:Q9UQ90 PRIDE:Q9UQ90
DNASU:6687 Ensembl:ENST00000268704 Ensembl:ENST00000341316
GeneID:6687 KEGG:hsa:6687 UCSC:uc002fni.3 UCSC:uc002fnj.3 CTD:6687
GeneCards:GC16P089574 HGNC:HGNC:11237 MIM:602783 MIM:607259
neXtProt:NX_Q9UQ90 Orphanet:99013 PharmGKB:PA36067
InParanoid:Q9UQ90 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
PhylomeDB:Q9UQ90 ChiTaRS:SPG7 EvolutionaryTrace:Q9UQ90
GenomeRNAi:6687 NextBio:26057 ArrayExpress:Q9UQ90 Bgee:Q9UQ90
CleanEx:HS_SPG7 Genevestigator:Q9UQ90 GermOnline:ENSG00000197912
Uniprot:Q9UQ90
Length = 795
Score = 297 (109.6 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 58/70 (82%), Positives = 63/70 (90%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 383 GGLGAARVRS 392
Score = 205 (77.2 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 485 TPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
T + K+ +KEE VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q
Sbjct: 556 TAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQH 615
Query: 542 LYNKEETLD 550
L+ KE+ +
Sbjct: 616 LFTKEQLFE 624
Score = 198 (74.8 bits), Expect = 1.1e-38, Sum P(2) = 1.1e-38
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++F
Sbjct: 571 VAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLF 623
Score = 193 (73.0 bits), Expect = 3.6e-38, Sum P(2) = 3.6e-38
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHA 505
VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++ F A
Sbjct: 571 VAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQL-FERMCMA 629
Query: 506 LVG 508
L G
Sbjct: 630 LGG 632
>UNIPROTKB|A7E2Z6 [details] [associations]
symbol:SPG7 "SPG7 protein" species:9913 "Bos taurus"
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
MEROPS:M41.006 CTD:6687 KO:K09552 OMA:MMDHEAK OrthoDB:EOG4PG60F
EMBL:DAAA02046269 EMBL:BC151632 IPI:IPI00866907
RefSeq:NP_001095492.1 UniGene:Bt.11239 SMR:A7E2Z6 STRING:A7E2Z6
Ensembl:ENSBTAT00000032500 GeneID:515269 KEGG:bta:515269
InParanoid:A7E2Z6 NextBio:20871741 Uniprot:A7E2Z6
Length = 779
Score = 297 (109.6 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 58/70 (82%), Positives = 63/70 (90%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 383 GGLGAARVRS 392
Score = 204 (76.9 bits), Expect = 2.3e-39, Sum P(2) = 2.3e-39
Identities = 51/114 (44%), Positives = 68/114 (59%)
Query: 442 VCRQVAFHES--GHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE--- 496
+C + A H + GH V HT L V R + G T + K+ +KEE
Sbjct: 524 ICNEAALHAAREGHTAV-----HTSNLDYA--VER--VVAG----TAKKSKVLSKEEQKV 570
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P +Q L+ +E+ +
Sbjct: 571 VAFHESGHALVGWLLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTREQLFE 624
Score = 197 (74.4 bits), Expect = 1.2e-38, Sum P(2) = 1.2e-38
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGFAQ P +Q L+ +E++F
Sbjct: 571 VAFHESGHALVGWLLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTREQLF 623
Score = 194 (73.4 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 44/108 (40%), Positives = 63/108 (58%)
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQVAFHESGHALVGWLL 460
+E L+ E + + TS + + V + + + VAFHESGHALVGWLL
Sbjct: 526 NEAALHAAREGHTAVHTSNLDYAVERVVAGTAKKSKVLSKEEQKVVAFHESGHALVGWLL 585
Query: 461 PHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHALVG 508
HT+A++KV+I PRT+ ALGFAQ P +Q L+ +E++ F AL G
Sbjct: 586 EHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTREQL-FERMCMALGG 632
>MGI|MGI:2385906 [details] [associations]
symbol:Spg7 "spastic paraplegia 7 homolog (human)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030155 "regulation of cell adhesion"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 MGI:MGI:2385906 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0030155 GO:GO:0031966 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0007155 GO:GO:0004222
GO:GO:0008089 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOVERGEN:HBG050184 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 MEROPS:M41.006
CTD:6687 KO:K09552 ChiTaRS:SPG7 EMBL:AF512565 EMBL:AF547215
EMBL:AK145540 EMBL:BC024466 EMBL:BC024986 EMBL:BC051051
EMBL:BC096690 IPI:IPI00170128 RefSeq:NP_694816.3 UniGene:Mm.292075
ProteinModelPortal:Q3ULF4 SMR:Q3ULF4 STRING:Q3ULF4
PhosphoSite:Q3ULF4 PaxDb:Q3ULF4 PRIDE:Q3ULF4
Ensembl:ENSMUST00000108868 GeneID:234847 KEGG:mmu:234847
UCSC:uc009nud.1 InParanoid:Q3ULF4 NextBio:382391 Bgee:Q3ULF4
CleanEx:MM_SPG7 Genevestigator:Q3ULF4 Uniprot:Q3ULF4
Length = 781
Score = 297 (109.6 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 58/70 (82%), Positives = 63/70 (90%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK PE + LGAKVPKGALLLGPPGCGKTLLAKAVATEA VPFL+M G EF+E+I
Sbjct: 323 EFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVI 382
Query: 62 GGLGAARVRT 71
GGLGAARVR+
Sbjct: 383 GGLGAARVRS 392
Score = 203 (76.5 bits), Expect = 3.0e-39, Sum P(2) = 3.0e-39
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 485 TPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
T + K+ +KEE VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q
Sbjct: 556 TAKKSKILSKEEQRVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQY 615
Query: 542 LYNKEETLD 550
L+ KE+ +
Sbjct: 616 LFTKEQLFE 624
Score = 199 (75.1 bits), Expect = 7.8e-39, Sum P(2) = 7.8e-39
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++F
Sbjct: 569 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQLF 623
Score = 194 (73.4 bits), Expect = 2.6e-38, Sum P(2) = 2.6e-38
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
R VAFHESGHALVGWLL HT+A++KV+I PRT+ ALGF+Q P +Q L+ KE++ F
Sbjct: 569 RVVAFHESGHALVGWLLEHTEAVMKVSIAPRTNAALGFSQMLPRDQYLFTKEQL-FERMC 627
Query: 504 HALVG 508
AL G
Sbjct: 628 MALGG 632
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 279 (103.3 bits), Expect = 4.3e-39, Sum P(2) = 4.3e-39
Identities = 51/69 (73%), Positives = 61/69 (88%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFVDYLK P + LGAK+P+GALL GPPGCGKTLLAKA+A E+ VPF+SMNGSEF+E+I
Sbjct: 299 EFVDYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAESTVPFISMNGSEFVEVI 358
Query: 62 GGLGAARVR 70
GGLGA+R+R
Sbjct: 359 GGLGASRIR 367
Score = 220 (82.5 bits), Expect = 4.3e-39, Sum P(2) = 4.3e-39
Identities = 39/57 (68%), Positives = 50/57 (87%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
+E VA+HE+GHALVGW+L HTDALLKVTI+PRTS ALGFAQY+P ++ L++K+E D
Sbjct: 549 REVVAYHEAGHALVGWMLEHTDALLKVTIIPRTSAALGFAQYSPRDKHLFSKDELFD 605
Score = 218 (81.8 bits), Expect = 7.0e-39, Sum P(2) = 7.0e-39
Identities = 38/53 (71%), Positives = 49/53 (92%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
VA+HE+GHALVGW+L HTDALLKVTI+PRTS ALGFAQY+P ++ L++K+E+F
Sbjct: 552 VAYHEAGHALVGWMLEHTDALLKVTIIPRTSAALGFAQYSPRDKHLFSKDELF 604
Score = 211 (79.3 bits), Expect = 3.8e-38, Sum P(2) = 3.8e-38
Identities = 37/52 (71%), Positives = 48/52 (92%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
VA+HE+GHALVGW+L HTDALLKVTI+PRTS ALGFAQY+P ++ L++K+E+
Sbjct: 552 VAYHEAGHALVGWMLEHTDALLKVTIIPRTSAALGFAQYSPRDKHLFSKDEL 603
Score = 38 (18.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 20/58 (34%), Positives = 24/58 (41%)
Query: 363 HESGHALVGWLLPHTDALLKVTI------VPRTSLALGFAQYTPSEQKLYNKEEIFSP 414
H S H L G LL H + L TI +P A F Q P+ K + E SP
Sbjct: 4 HRSTHRL-G-LLFHRNPLFSGTINRFSTVLPHILSARRFPQRRPARPKEESSEAEKSP 59
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 274 (101.5 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF+++NGSEF+EM
Sbjct: 316 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEM 375
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR V C +F+ EI
Sbjct: 376 FVGVGPARVRDLFVLARKNAPCILFIDEI 404
Score = 183 (69.5 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 563 KKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 618
Score = 173 (66.0 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 564 KTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 622
Query: 418 SRSHRV 423
+ RV
Sbjct: 623 TLGGRV 628
Score = 171 (65.3 bits), Expect = 2.8e-33, Sum P(2) = 2.8e-33
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 564 KTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 616
Score = 42 (19.8 bits), Expect = 8.8e-20, Sum P(2) = 8.8e-20
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 162 EKVLKIDAELRHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARK 221
EKV ++ +L + EL LE+ + +E++N + QL SDKK +
Sbjct: 663 EKVGQVSFDLPRQGELVLEKPYSEATARLIDTEVRNLISTAYERTQQLL---SDKKPEVE 719
Query: 222 QLIDSVNREIAETILLKNFAHQLIVKCPLMMTYSSEE 258
++ R + + +L KN +L+ K P + EE
Sbjct: 720 KV---ALRLLEKEVLDKNDMVELLGKRPFAEKSTYEE 753
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 267 (99.0 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ Y++LGAK+PKGA+L GPPG GKTLLAKA A EANVPF+++NGSEF+EM
Sbjct: 165 MEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEM 224
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 225 FVGVGPARVRDLFALARKNAPCILFIDEI 253
Score = 183 (69.5 bits), Expect = 3.7e-34, Sum P(2) = 3.7e-34
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 412 KKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 467
Score = 173 (66.0 bits), Expect = 4.2e-33, Sum P(2) = 4.2e-33
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 413 KTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 471
Query: 418 SRSHRV 423
+ RV
Sbjct: 472 TLGGRV 477
Score = 171 (65.3 bits), Expect = 6.8e-33, Sum P(2) = 6.8e-33
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 413 KTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 465
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 272 (100.8 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF+++NGSEF+EM
Sbjct: 313 MEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEM 372
Query: 61 IGGLGAARVRTEVVFL--H--CRVFLHEI 85
G+G ARVR H C +F+ EI
Sbjct: 373 FVGVGPARVRDMFAMARKHAPCILFIDEI 401
Score = 178 (67.7 bits), Expect = 8.4e-34, Sum P(2) = 8.4e-34
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E++F +
Sbjct: 563 VAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQFLYTREQLFDRMCMML 621
Query: 420 SHRVLRKWVLSSLLT 434
RV + + T
Sbjct: 622 GGRVAEQLFFGQITT 636
Score = 176 (67.0 bits), Expect = 1.4e-33, Sum P(2) = 1.4e-33
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E+ D
Sbjct: 560 KTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQFLYTREQLFD 615
Score = 169 (64.5 bits), Expect = 7.3e-33, Sum P(2) = 7.3e-33
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E++
Sbjct: 563 VAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQFLYTREQL 613
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 267 (99.0 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ Y++LGAK+PKGA+L GPPG GKTLLAKA A EANVPF+++NGSEF+EM
Sbjct: 321 MEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEM 380
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 381 FVGVGPARVRDLFALARKNAPCILFIDEI 409
Score = 183 (69.5 bits), Expect = 9.8e-34, Sum P(2) = 9.8e-34
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 568 KKTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 623
Score = 173 (66.0 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 569 KTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 627
Query: 418 SRSHRV 423
+ RV
Sbjct: 628 TLGGRV 633
Score = 171 (65.3 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 569 KTVAYHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 621
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 250 (93.1 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 47/70 (67%), Positives = 60/70 (85%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P+ Y++LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFLS++GS+F+EM
Sbjct: 335 MEFVHFLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEM 394
Query: 61 IGGLGAARVR 70
G+G +RVR
Sbjct: 395 FVGVGPSRVR 404
Score = 199 (75.1 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 47/114 (41%), Positives = 64/114 (56%)
Query: 342 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
V+ L N+ S L R VA+HESGHA+VGW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 564 VIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 623
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLT-----VNKFASLVCRQVAFH 449
+E L KE++F + R + ++ + T + K + QVA +
Sbjct: 624 NENLLMTKEQLFDMTCMTLGGRAAEQVLIGKISTGAQNDLEKVTKMTYAQVAVY 677
Score = 191 (72.3 bits), Expect = 9.0e-33, Sum P(3) = 9.0e-33
Identities = 40/71 (56%), Positives = 49/71 (69%)
Query: 428 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
V+ L N+ S L R VA+HESGHA+VGW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 564 VIGGLEKKNRVISKLERRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 623
Query: 487 SEQKLYNKEEV 497
+E L KE++
Sbjct: 624 NENLLMTKEQL 634
Score = 188 (71.2 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 35/57 (61%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
+ VA+HESGHA+VGW L H + LLKVTIVPR + ALGFAQY P+E L KE+ D
Sbjct: 580 RRTVAYHESGHAVVGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFD 636
Score = 45 (20.9 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 595 IGESQPFRERTLSHQDKIRPGRESNPRPSA 624
+GE +PF+ +++ D+ + G E + SA
Sbjct: 757 LGE-RPFKSAEVTNYDRFKSGFEETEKDSA 785
Score = 43 (20.2 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 210 RAYESDKKLARKQLIDSVNREIAETILLKNFAHQ 243
+AYE +L + + EIAE +L K HQ
Sbjct: 719 KAYERTVELVEEHKVKVA--EIAELLLEKEVLHQ 750
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 265 (98.3 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 321 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 380
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 381 FVGVGPARVRDLFALARKNAPCILFIDEI 409
Score = 182 (69.1 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 568 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 623
Score = 172 (65.6 bits), Expect = 2.2e-32, Sum P(2) = 2.2e-32
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 569 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 627
Query: 418 SRSHRV 423
+ RV
Sbjct: 628 TLGGRV 633
Score = 170 (64.9 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 569 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 621
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 265 (98.3 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 320 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 379
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 380 FVGVGPARVRDLFALARKNAPCILFIDEI 408
Score = 182 (69.1 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 567 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 622
Score = 172 (65.6 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 568 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 626
Query: 418 SRSHRV 423
+ RV
Sbjct: 627 TLGGRV 632
Score = 170 (64.9 bits), Expect = 3.7e-32, Sum P(2) = 3.7e-32
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 568 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 620
Score = 38 (18.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 11/27 (40%), Positives = 12/27 (44%)
Query: 20 VPKGALLLGPPGCGKTLLAKAVATEAN 46
VP G L G C +TL A AN
Sbjct: 23 VPSGCLGPGRRPCLRTLYQYATVQTAN 49
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 265 (98.3 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 320 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 379
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 380 FVGVGPARVRDLFALARKNAPCILFIDEI 408
Score = 182 (69.1 bits), Expect = 2.0e-33, Sum P(2) = 2.0e-33
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 567 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 622
Score = 172 (65.6 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 568 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 626
Query: 418 SRSHRV 423
+ RV
Sbjct: 627 TLGGRV 632
Score = 170 (64.9 bits), Expect = 3.7e-32, Sum P(2) = 3.7e-32
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 568 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 620
Score = 37 (18.1 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 129 LEEEYSIELGRKLQDMEIKHAEELKKQEQ 157
L+E+ S+ G LQD + +E KK+++
Sbjct: 765 LDEDTSLPEG--LQDWNKEREKEEKKEKE 791
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 265 (98.3 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 322 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 381
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 382 FVGVGPARVRDLFALARKNAPCILFIDEI 410
Score = 182 (69.1 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 569 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 624
Score = 172 (65.6 bits), Expect = 2.3e-32, Sum P(2) = 2.3e-32
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++ +
Sbjct: 570 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLDRMCM 628
Query: 418 SRSHRV 423
+ RV
Sbjct: 629 TLGGRV 634
Score = 170 (64.9 bits), Expect = 3.7e-32, Sum P(2) = 3.7e-32
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 570 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 622
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 266 (98.7 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 54/89 (60%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EA VPF+++NGSEF+EM
Sbjct: 285 MEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAGEAKVPFITVNGSEFLEM 344
Query: 61 IGGLGAARVRTEVVFL--H--CRVFLHEI 85
G+G ARVR H C +F+ EI
Sbjct: 345 FVGVGPARVRDMFAMARKHAPCILFIDEI 373
Score = 179 (68.1 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 35/75 (46%), Positives = 47/75 (62%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E++F +
Sbjct: 535 VAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQLFDRMCMML 593
Query: 420 SHRVLRKWVLSSLLT 434
RV + + T
Sbjct: 594 GGRVAEQLFFGQITT 608
Score = 177 (67.4 bits), Expect = 4.4e-33, Sum P(2) = 4.4e-33
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E+ D
Sbjct: 532 KTTVAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQLFD 587
Score = 170 (64.9 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 31/52 (59%), Positives = 40/52 (76%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
VA+HE+GHA+VGW L H D LLKV+I+PR LG+AQY P EQ LY +E++
Sbjct: 535 VAYHEAGHAVVGWFLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQL 585
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 261 (96.9 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 52/89 (58%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ Y++LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 306 MEFVNFLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 365
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 366 FVGVGPARVRDMFSMARKNSPCILFIDEI 394
Score = 184 (69.8 bits), Expect = 3.2e-33, Sum P(2) = 3.2e-33
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 480 GFAQYTPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE 539
G + T QK K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P E
Sbjct: 540 GMEKKTQVLQK-EEKKTVAYHEAGHAIAGWFLQHADPLLKVSIIPRGK-GLGYAQYLPKE 597
Query: 540 QKLYNKEETLD 550
Q LY+K++ LD
Sbjct: 598 QYLYSKDQLLD 608
Score = 173 (66.0 bits), Expect = 4.6e-32, Sum P(2) = 4.6e-32
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY+K+++ +
Sbjct: 554 KTVAYHEAGHAIAGWFLQHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYSKDQLLDRMCM 612
Query: 418 SRSHRVLRKWVLSSLLT 434
+ RV + + T
Sbjct: 613 TLGGRVAEEIFFGRITT 629
Score = 170 (64.9 bits), Expect = 9.5e-32, Sum P(2) = 9.5e-32
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY+K+++
Sbjct: 554 KTVAYHEAGHAIAGWFLQHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYSKDQL 606
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 265 (98.3 bits), Expect = 5.4e-33, Sum P(2) = 5.4e-33
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 322 MEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 381
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 382 FVGVGPARVRDLFALARKNAPCILFIDEI 410
Score = 178 (67.7 bits), Expect = 5.4e-33, Sum P(2) = 5.4e-33
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY +E+ LD
Sbjct: 569 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQLLD 624
Score = 168 (64.2 bits), Expect = 6.0e-32, Sum P(2) = 6.0e-32
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY +E++ +
Sbjct: 570 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQLLDRMCM 628
Query: 418 SRSHRV 423
+ RV
Sbjct: 629 TLGGRV 634
Score = 166 (63.5 bits), Expect = 9.8e-32, Sum P(2) = 9.8e-32
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY +E++
Sbjct: 570 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPREQYLYTREQL 622
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 256 (95.2 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 53/90 (58%), Positives = 67/90 (74%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPK-GALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIE 59
MEFV++LK P+ YQ+LGAK+PK GA+L GPPG GKTLLAKA A EANVPF++++GSEF+E
Sbjct: 112 MEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLE 171
Query: 60 MIGGLGAARVRTEVVFLH----CRVFLHEI 85
M G+G ARVR C +F+ EI
Sbjct: 172 MFVGVGPARVRDLFALARKNAPCILFIDEI 201
Score = 182 (69.1 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 34/57 (59%), Positives = 42/57 (73%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE+ LD
Sbjct: 360 KKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQLLD 415
Score = 171 (65.3 bits), Expect = 8.9e-32, Sum P(2) = 8.9e-32
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEI 411
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 361 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 413
Score = 170 (64.9 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 31/54 (57%), Positives = 40/54 (74%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
+ VA+HE+GHA+ GW L H D LLKV+I+PR LG+AQY P EQ LY KE++
Sbjct: 361 KTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGK-GLGYAQYLPKEQYLYTKEQL 413
>TAIR|locus:2025052 [details] [associations]
symbol:ftsh10 "FTSH protease 10" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
EMBL:AC022464 ProtClustDB:CLSN2692039 EMBL:AY064138 EMBL:AY124808
EMBL:AK230173 IPI:IPI00520253 PIR:H86209 RefSeq:NP_172231.2
UniGene:At.23339 ProteinModelPortal:Q8VZI8 SMR:Q8VZI8 STRING:Q8VZI8
MEROPS:M41.023 PaxDb:Q8VZI8 PRIDE:Q8VZI8 EnsemblPlants:AT1G07510.1
GeneID:837265 KEGG:ath:AT1G07510 GeneFarm:2535 GeneFarm:2675
TAIR:At1g07510 InParanoid:Q8VZI8 OMA:YSEDTAM PhylomeDB:Q8VZI8
Genevestigator:Q8VZI8 Uniprot:Q8VZI8
Length = 813
Score = 245 (91.3 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +L+ P+ Y++LGAK+PKGALL+GPPG GKTLLAKA A E+ VPFLS++GS+F+EM
Sbjct: 340 MEFVHFLQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEM 399
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G+G +RVR +F R I D
Sbjct: 400 FVGVGPSRVRN--LFQEARQCAPSIIFID 426
Score = 194 (73.4 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 40/72 (55%), Positives = 49/72 (68%)
Query: 342 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
V+ L N+ S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 570 VIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 629
Query: 401 SEQKLYNKEEIF 412
+E L KE++F
Sbjct: 630 NENLLMTKEQLF 641
Score = 187 (70.9 bits), Expect = 1.4e-31, Sum P(3) = 1.4e-31
Identities = 39/71 (54%), Positives = 48/71 (67%)
Query: 428 VLSSLLTVNKFAS-LVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
V+ L N+ S L R VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P
Sbjct: 570 VIGGLEKKNRVISKLERRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVP 629
Query: 487 SEQKLYNKEEV 497
+E L KE++
Sbjct: 630 NENLLMTKEQL 640
Score = 184 (69.8 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
Identities = 34/57 (59%), Positives = 41/57 (71%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
+ VA+HESGHA+ GW L H + LLKVTIVPR + ALGFAQY P+E L KE+ D
Sbjct: 586 RRTVAYHESGHAVAGWFLEHAEPLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFD 642
Score = 43 (20.2 bits), Expect = 2.6e-32, Sum P(3) = 2.6e-32
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 595 IGESQPFRERTLSHQDKIRPGRESNPRPSAYKAVALPTK 633
+GE +PF+ ++ D+ + G E + + S ++V P K
Sbjct: 761 LGE-RPFKSGETTNYDRFKSGFEESEKESQKESV--PVK 796
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 266 (98.7 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 54/89 (60%), Positives = 66/89 (74%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ YQ+LGAK+PKGALL GPPG GKTLLAKA A EA VPF+++NGSEF+EM
Sbjct: 316 MEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAGVPFITVNGSEFLEM 375
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G ARVR C +F+ EI
Sbjct: 376 FVGVGPARVRDMFALARKNAPCILFVDEI 404
Score = 170 (64.9 bits), Expect = 2.9e-32, Sum P(2) = 2.9e-32
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA+HE+GHA+VGW L H D LLKV+IVPR LG+AQ P EQ LY +E++F +
Sbjct: 568 VAYHEAGHAVVGWFLEHADPLLKVSIVPRGK-GLGYAQCLPREQYLYTREQLFDRMCAML 626
Query: 420 SHRVLRKWVLSSLLT 434
RV + + T
Sbjct: 627 GGRVAEQLFFGRVTT 641
Score = 168 (64.2 bits), Expect = 4.6e-32, Sum P(2) = 4.6e-32
Identities = 33/57 (57%), Positives = 40/57 (70%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K VA+HE+GHA+VGW L H D LLKV+IVPR LG+AQ P EQ LY +E+ D
Sbjct: 565 KMTVAYHEAGHAVVGWFLEHADPLLKVSIVPRGK-GLGYAQCLPREQYLYTREQLFD 620
Score = 162 (62.1 bits), Expect = 2.0e-31, Sum P(2) = 2.0e-31
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
VA+HE+GHA+VGW L H D LLKV+IVPR LG+AQ P EQ LY +E++
Sbjct: 568 VAYHEAGHAVVGWFLEHADPLLKVSIVPRGK-GLGYAQCLPREQYLYTREQL 618
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 257 (95.5 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 53/89 (59%), Positives = 63/89 (70%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P Y LGAK+P+GA+L GPPG GKTLLAKA A EANVPFLS++GSEF+EM
Sbjct: 301 MEFVHFLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEM 360
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G+GA+RVR +F R I D
Sbjct: 361 FVGVGASRVRD--LFTQARSMAPSIIFID 387
Score = 162 (62.1 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 33/65 (50%), Positives = 44/65 (67%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
R VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +Q L ++E+ H
Sbjct: 553 RSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQFR-HRMI 611
Query: 504 HALVG 508
AL G
Sbjct: 612 MALGG 616
Score = 161 (61.7 bits), Expect = 2.0e-31, Sum P(3) = 2.0e-31
Identities = 29/53 (54%), Positives = 40/53 (75%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 410
R VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 553 RSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQ 605
Score = 161 (61.7 bits), Expect = 2.1e-30, Sum P(2) = 2.1e-30
Identities = 29/54 (53%), Positives = 40/54 (74%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 547
K VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 552 KRSVAYHEAGHAVCGWFLKYADPLLKVSIIPRGQGALGYAQYLPPDQYLISEEQ 605
Score = 53 (23.7 bits), Expect = 1.6e-31, Sum P(3) = 1.6e-31
Identities = 24/104 (23%), Positives = 45/104 (43%)
Query: 530 LGFAQYTPSEQKLYNKEETLDPKKEMTVNREQPPSHDKKKRKC---LTE-ISVTTMVLSS 585
+G+ + ++ + + K T++ E D R C LT+ + +V
Sbjct: 655 IGYLSFDQNDGN-FKVNKPFSNKTARTIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKE 713
Query: 586 LNRRE---KED--RIGESQPFRERTLSHQDKIRPGRESNPRPSA 624
L R+E +ED R+ +PF+ER + + + P + P P A
Sbjct: 714 LLRKEAITREDMIRLLGPRPFKERNEAFEKYLDPKSNTEP-PEA 756
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 229 (85.7 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 50/89 (56%), Positives = 62/89 (69%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P Y+ LGA++PKGA+L GPPG GKTLLAKA A EA V F +++GS+FIEM
Sbjct: 367 MEFVSFLKDPSRYKKLGARIPKGAILSGPPGTGKTLLAKATAGEAGVNFYTISGSDFIEM 426
Query: 61 IGGLGAARVRT---EV-VFLHCRVFLHEI 85
G+G +RVR E C VF+ EI
Sbjct: 427 FVGVGPSRVRDLFKEARANTPCIVFIDEI 455
Score = 200 (75.5 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 45/94 (47%), Positives = 56/94 (59%)
Query: 342 VLSSLLTVNKFASLVCRQ-VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
VL L N+ S R VA HE+GHA+VGW L HTD LLKV+IVPR S LGFAQY P
Sbjct: 595 VLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLKVSIVPRGSGTLGFAQYQP 654
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLT 434
+Q LY +E++F I S R+ + + T
Sbjct: 655 KDQYLYTREQLFDRICVSLGGRIAESIIFDRIST 688
Score = 190 (71.9 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 38/66 (57%), Positives = 47/66 (71%)
Query: 488 EQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 544
E ++ + EE VA HE+GHA+VGW L HTD LLKV+IVPR S LGFAQY P +Q LY
Sbjct: 602 ENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLKVSIVPRGSGTLGFAQYQPKDQYLYT 661
Query: 545 KEETLD 550
+E+ D
Sbjct: 662 REQLFD 667
Score = 183 (69.5 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 40/71 (56%), Positives = 48/71 (67%)
Query: 428 VLSSLLTVNKFASLVCRQ-VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
VL L N+ S R VA HE+GHA+VGW L HTD LLKV+IVPR S LGFAQY P
Sbjct: 595 VLVGLKRENRVLSPEERTIVAHHEAGHAVVGWFLEHTDPLLKVSIVPRGSGTLGFAQYQP 654
Query: 487 SEQKLYNKEEV 497
+Q LY +E++
Sbjct: 655 KDQYLYTREQL 665
Score = 45 (20.9 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 285 NVNQSHNIPQEIYDDILNLKLNLEK 309
N N+++ IPQ I D+ N N+ K
Sbjct: 39 NNNENNKIPQSIIDNNNNSNRNILK 63
Score = 45 (20.9 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 15/56 (26%), Positives = 31/56 (55%)
Query: 130 EEEYSIELGRKLQDMEIKHA---EELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
E+E +++ + D+E K E++K +++ KEK K + E +K+E + E +
Sbjct: 114 EKETTVKQDKNKNDVENKKENENEKVKDEKEKDEKEKEEK-EEEKENKEEKENEEE 168
Score = 44 (20.5 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 273 KQNFLPQTSTASNVNQSHNIPQ-EIYDDILNLKLNLEK 309
+ N +PQ+ +N N + NI + IY N K+ K
Sbjct: 42 ENNKIPQSIIDNNNNSNRNILKCNIYSSFNNNKIENNK 79
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 238 (88.8 bits), Expect = 4.0e-31, Sum P(3) = 4.0e-31
Identities = 48/88 (54%), Positives = 66/88 (75%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
EFV++LK P+ + ++GAK+P+GA+L+GPPG GKTL+AKA A EANVPF S +GS+F+EM
Sbjct: 316 EFVNFLKNPKKFHDIGAKIPRGAILVGPPGTGKTLIAKATAGEANVPFYSTSGSDFVEMF 375
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+G +RVR E + C VF+ EI
Sbjct: 376 VGVGPSRVRDLFEQARKNAPCIVFIDEI 403
Score = 185 (70.2 bits), Expect = 4.0e-31, Sum P(3) = 4.0e-31
Identities = 42/94 (44%), Positives = 55/94 (58%)
Query: 342 VLSSLLTVNKFASLV-CRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 400
V+ L NK S R VA+HE+GHA+V W L H LLKV+IVPR ALG+AQY P
Sbjct: 544 VIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLKHCHPLLKVSIVPRGVAALGYAQYLP 603
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLT 434
EQ L N+E+IF + + RV + ++ T
Sbjct: 604 KEQFLQNQEQIFDMMCMALGGRVAEQLTFGTITT 637
Score = 172 (65.6 bits), Expect = 8.8e-30, Sum P(3) = 8.8e-30
Identities = 33/57 (57%), Positives = 40/57 (70%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K VA+HE+GHA+V W L H LLKV+IVPR ALG+AQY P EQ L N+E+ D
Sbjct: 560 KRTVAYHEAGHAVVSWFLKHCHPLLKVSIVPRGVAALGYAQYLPKEQFLQNQEQIFD 616
Score = 172 (65.6 bits), Expect = 8.8e-30, Sum P(3) = 8.8e-30
Identities = 37/71 (52%), Positives = 46/71 (64%)
Query: 428 VLSSLLTVNKFASLV-CRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
V+ L NK S R VA+HE+GHA+V W L H LLKV+IVPR ALG+AQY P
Sbjct: 544 VIGGLEKKNKVLSPTEKRTVAYHEAGHAVVSWFLKHCHPLLKVSIVPRGVAALGYAQYLP 603
Query: 487 SEQKLYNKEEV 497
EQ L N+E++
Sbjct: 604 KEQFLQNQEQI 614
Score = 53 (23.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 260 RNLNIPASFKMMKKQNFLPQTSTASNVNQSHNI 292
RN N+ S++ +KK + QTS S S+NI
Sbjct: 6 RNRNLIKSYEKIKKPITITQTSLFSKQQYSNNI 38
Score = 47 (21.6 bits), Expect = 4.0e-31, Sum P(3) = 4.0e-31
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 127 KKLEEEYSIELGRKLQDMEIKHAEELKK 154
K EE + + L L D I +AE L K
Sbjct: 476 KSREEIFRVHLAALLLDKSINYAERLSK 503
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 257 (95.5 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 52/89 (58%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV++LK P+ Y +LGAK+PKGA+L GPPG GKTLLAKA A EANVPF++++GSEF+EM
Sbjct: 341 MEFVNFLKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEM 400
Query: 61 IGGLGAARVRTEVVFL--H--CRVFLHEI 85
G+G +RVR H C +F+ EI
Sbjct: 401 FVGVGPSRVRDMFAMARKHAPCILFIDEI 429
Score = 166 (63.5 bits), Expect = 8.4e-31, Sum P(2) = 8.4e-31
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDT 417
R VA HE+GHA+ GW L H D LLKV+I+PR LG+AQY P + L +KE++F +
Sbjct: 587 RTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKDHYLLSKEQLFDRMCM 645
Query: 418 SRSHRVLRKWVLSSLLT 434
+ RV + + + T
Sbjct: 646 TLGGRVAEELFFNRITT 662
Score = 164 (62.8 bits), Expect = 1.4e-30, Sum P(2) = 1.4e-30
Identities = 39/105 (37%), Positives = 58/105 (55%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLDPK- 552
K VA HE+GHA+ GW L H D LLKV+I+PR LG+AQY P + L +KE+ D
Sbjct: 586 KRTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKDHYLLSKEQLFDRMC 644
Query: 553 --------KEMTVNREQPPSHDKKKRKCLTEISVTTMVLSSLNRR 589
+E+ NR + D K+ +T+I+ + +V +N +
Sbjct: 645 MTLGGRVAEELFFNRITTGAQDDLKK--ITDIAYSQVVRFGMNEK 687
Score = 155 (59.6 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 29/54 (53%), Positives = 38/54 (70%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
R VA HE+GHA+ GW L H D LLKV+I+PR LG+AQY P + L +KE++
Sbjct: 587 RTVAHHEAGHAVAGWFLEHADPLLKVSIIPRGK-GLGYAQYLPKDHYLLSKEQL 639
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 262 (97.3 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 53/89 (59%), Positives = 67/89 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P++Y+ LGAK+P+GA+L GPPG GKTLLAKA A EANVPFLS++GSEF+EM
Sbjct: 309 MEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEM 368
Query: 61 IGGLGAARVR----TEVVFLHCRVFLHEI 85
G+G +RVR T C +F+ EI
Sbjct: 369 FVGVGPSRVRDLFATARKNAPCIIFIDEI 397
Score = 151 (58.2 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
Identities = 28/57 (49%), Positives = 39/57 (68%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
K VA HE+GHA+ GW + + D LLKV+I+PR ALG+A Y P +Q L ++ + LD
Sbjct: 555 KNTVAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQILD 610
Score = 150 (57.9 bits), Expect = 8.7e-30, Sum P(2) = 8.7e-30
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHA 505
VA HE+GHA+ GW + + D LLKV+I+PR ALG+A Y P +Q L ++ ++ + G A
Sbjct: 558 VAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQI-LDQMGMA 615
Query: 506 LVG 508
L G
Sbjct: 616 LAG 618
Score = 147 (56.8 bits), Expect = 1.8e-29, Sum P(2) = 1.8e-29
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA HE+GHA+ GW + + D LLKV+I+PR ALG+A Y P +Q L ++ +I + +
Sbjct: 558 VAHHEAGHAVAGWFMEYVDPLLKVSIIPRAQ-ALGYASYLPKDQYLMSRGQILDQMGMAL 616
Query: 420 SHRV 423
+ RV
Sbjct: 617 AGRV 620
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 249 (92.7 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +L+ PE Y+ LGAK+P+GA+L GPPG GKTLLAKA A EA VPF S++GSEF+EM
Sbjct: 386 MEFVKFLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYSVSGSEFVEM 445
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 446 FVGVGASRVR 455
Score = 154 (59.3 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 488 EQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 544
+ KL N EE VA+HE+GHA+ GW L + LLKV+I+PR ALG+AQY P +Q L +
Sbjct: 624 KSKLLNPEEQKIVAYHEAGHAICGWYLKYAHPLLKVSIIPRGQGALGYAQYLPPDQYLMS 683
Query: 545 KEETLD 550
+ D
Sbjct: 684 TLQLYD 689
Score = 145 (56.1 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA+HE+GHA+ GW L + LLKV+I+PR ALG+AQY P +Q L + +++ + +
Sbjct: 636 VAYHEAGHAICGWYLKYAHPLLKVSIIPRGQGALGYAQYLPPDQYLMSTLQLYDRMIMTL 695
Query: 420 SHRV 423
RV
Sbjct: 696 GGRV 699
Score = 141 (54.7 bits), Expect = 2.9e-27, Sum P(2) = 2.9e-27
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
VA+HE+GHA+ GW L + LLKV+I+PR ALG+AQY P +Q L
Sbjct: 636 VAYHEAGHAICGWYLKYAHPLLKVSIIPRGQGALGYAQYLPPDQYL 681
Score = 53 (23.7 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 35/149 (23%), Positives = 60/149 (40%)
Query: 118 NLEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKEL 177
N+EK + K ++ + + + + K + + K E K+K++ I EL K
Sbjct: 153 NIEK--ITPKARQDPFGMFFNKANPKQDDKDSSKNKSNEDTKDKKKIVDISIELTPKNIF 210
Query: 178 --DLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSVNREIAETI 235
L + I + S + E++ T Y + K L +K + +N + E
Sbjct: 211 IYTLVFSLATSLILGMGSSNDDTEINFQSFVTD---YLT-KNLVKKVTV--INNSVVEVE 264
Query: 236 LLKNFAHQLIVKCPLMMTYSSEEG--RNL 262
L +N A Q + L T S E RNL
Sbjct: 265 LNENGASQHNQQKRLYFTIGSVESFERNL 293
Score = 44 (20.5 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 80 VFLHEITIFDLETKIIENIFDL--ETKIILSSFMMIVLKLNLEKEV 123
+F++ + +F L T +I + +T+I SF+ L NL K+V
Sbjct: 209 IFIYTL-VFSLATSLILGMGSSNDDTEINFQSFVTDYLTKNLVKKV 253
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 247 (92.0 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +L+ P Y+ LGAK+P+GA+L GPPG GKTLLAKA A EA VPFLS++GSEF+EM
Sbjct: 300 MEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEM 359
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 360 FVGVGASRVR 369
Score = 159 (61.0 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 547
K+ VA+HE+GHA+ GW L + D L+KV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 567 KKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPKDQYLTSQEQ 620
Score = 157 (60.3 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQ-VAFHESGHALVGWL 459
+E L E +DT + + + V++ L ++ S ++ VA+HE+GHA+ GW
Sbjct: 525 NEGALIAAREDAPAVDTYHFEQAIER-VIAGLEKKSRILSPEEKKTVAYHEAGHAICGWF 583
Query: 460 LPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
L + D L+KV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 584 LQYADPLVKVSIIPRGQGALGYAQYLPKDQYLTSQEQ 620
Score = 156 (60.0 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 329 IDTSRSHRVLRKWVLSSLLTVNKFASLVCRQ-VAFHESGHALVGWLLPHTDALLKVTIVP 387
+DT + + + V++ L ++ S ++ VA+HE+GHA+ GW L + D L+KV+I+P
Sbjct: 539 VDTYHFEQAIER-VIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIP 597
Query: 388 RTSLALGFAQYTPSEQKLYNKEE 410
R ALG+AQY P +Q L ++E+
Sbjct: 598 RGQGALGYAQYLPKDQYLTSQEQ 620
Score = 48 (22.0 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 119 LEKEVMLRKKLEEEYSI---ELGRKLQDMEIKHAEELKKQEQCLRKEKVLKI 167
+++EV ++ ++E Y L KL D+ K AEEL K+E L +E ++KI
Sbjct: 699 IDEEV--KRLIDESYEACHKLLTEKL-DLVDKVAEELFKKE-VLTREDMIKI 746
Score = 40 (19.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 379 ALLKVTIVPRTSLALGFAQYTP----SEQKLYNK 408
A++ ++ R+++ F+ YTP + ++L+NK
Sbjct: 13 AIISRPVLYRSAIPRHFSTYTPLAFRTSRQLFNK 46
Score = 40 (19.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 465 ALLKVTIVPRTSLALGFAQYTP----SEQKLYNK 494
A++ ++ R+++ F+ YTP + ++L+NK
Sbjct: 13 AIISRPVLYRSAIPRHFSTYTPLAFRTSRQLFNK 46
Score = 39 (18.8 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 13/48 (27%), Positives = 28/48 (58%)
Query: 126 RKKLEEEYSIELGRK-LQDMEIKHAE-ELKKQEQCLRKEKVLKIDAEL 171
RK++ + + +L K +QD++ K + + K +Q L+ E++ K+ L
Sbjct: 462 RKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQ-LKNEEIEKLAGRL 508
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 247 (92.0 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 47/70 (67%), Positives = 58/70 (82%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +L+ P Y+ LGAK+P+GA+L GPPG GKTLLAKA A EA VPFLS++GSEF+EM
Sbjct: 300 MEFVKFLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFLSVSGSEFVEM 359
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 360 FVGVGASRVR 369
Score = 159 (61.0 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 547
K+ VA+HE+GHA+ GW L + D L+KV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 567 KKTVAYHEAGHAICGWFLQYADPLVKVSIIPRGQGALGYAQYLPKDQYLTSQEQ 620
Score = 157 (60.3 bits), Expect = 2.5e-28, Sum P(3) = 2.5e-28
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 401 SEQKLYNKEEIFSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQ-VAFHESGHALVGWL 459
+E L E +DT + + + V++ L ++ S ++ VA+HE+GHA+ GW
Sbjct: 525 NEGALIAAREDAPAVDTYHFEQAIER-VIAGLEKKSRILSPEEKKTVAYHEAGHAICGWF 583
Query: 460 LPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
L + D L+KV+I+PR ALG+AQY P +Q L ++E+
Sbjct: 584 LQYADPLVKVSIIPRGQGALGYAQYLPKDQYLTSQEQ 620
Score = 156 (60.0 bits), Expect = 3.2e-28, Sum P(3) = 3.2e-28
Identities = 32/83 (38%), Positives = 54/83 (65%)
Query: 329 IDTSRSHRVLRKWVLSSLLTVNKFASLVCRQ-VAFHESGHALVGWLLPHTDALLKVTIVP 387
+DT + + + V++ L ++ S ++ VA+HE+GHA+ GW L + D L+KV+I+P
Sbjct: 539 VDTYHFEQAIER-VIAGLEKKSRILSPEEKKTVAYHEAGHAICGWFLQYADPLVKVSIIP 597
Query: 388 RTSLALGFAQYTPSEQKLYNKEE 410
R ALG+AQY P +Q L ++E+
Sbjct: 598 RGQGALGYAQYLPKDQYLTSQEQ 620
Score = 48 (22.0 bits), Expect = 2.0e-17, Sum P(2) = 2.0e-17
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 119 LEKEVMLRKKLEEEYSI---ELGRKLQDMEIKHAEELKKQEQCLRKEKVLKI 167
+++EV ++ ++E Y L KL D+ K AEEL K+E L +E ++KI
Sbjct: 699 IDEEV--KRLIDESYEACHKLLTEKL-DLVDKVAEELFKKE-VLTREDMIKI 746
Score = 40 (19.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 379 ALLKVTIVPRTSLALGFAQYTP----SEQKLYNK 408
A++ ++ R+++ F+ YTP + ++L+NK
Sbjct: 13 AIISRPVLYRSAIPRHFSTYTPLAFRTSRQLFNK 46
Score = 40 (19.1 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 465 ALLKVTIVPRTSLALGFAQYTP----SEQKLYNK 494
A++ ++ R+++ F+ YTP + ++L+NK
Sbjct: 13 AIISRPVLYRSAIPRHFSTYTPLAFRTSRQLFNK 46
Score = 39 (18.8 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 13/48 (27%), Positives = 28/48 (58%)
Query: 126 RKKLEEEYSIELGRK-LQDMEIKHAE-ELKKQEQCLRKEKVLKIDAEL 171
RK++ + + +L K +QD++ K + + K +Q L+ E++ K+ L
Sbjct: 462 RKQIFKVHLNKLKLKSVQDIDAKQKDVDFSKYQQ-LKNEEIEKLAGRL 508
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 244 (91.0 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 46/70 (65%), Positives = 56/70 (80%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK P Y+ +GAK+P+GA+L GPPG GKTLLAKA A EA VPF ++GSEF+EM
Sbjct: 361 MEFVSFLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEM 420
Query: 61 IGGLGAARVR 70
G+GAARVR
Sbjct: 421 FVGVGAARVR 430
Score = 154 (59.3 bits), Expect = 4.2e-28, Sum P(2) = 4.2e-28
Identities = 39/114 (34%), Positives = 58/114 (50%)
Query: 488 EQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 544
+ KL + EE VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P + L
Sbjct: 598 KSKLLSPEEKKVVAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLT 657
Query: 545 KEETLDPKKEMTVNREQPPSHDKKKRKCLTEI--SVTTMVLSSLNRREKEDRIG 596
+++ D R H ++ VT+M + + D+IG
Sbjct: 658 EQQLKDRMTMSLGGRVSEELHFPSVTSGASDDFKKVTSMATAMVTELGMSDKIG 711
Score = 148 (57.2 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIFSPIDTSR 419
VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P + L ++++ + S
Sbjct: 610 VAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQLKDRMTMSL 669
Query: 420 SHRV 423
RV
Sbjct: 670 GGRV 673
Score = 144 (55.7 bits), Expect = 4.7e-27, Sum P(2) = 4.7e-27
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
VA+HE+GHA+ GW L + D LLKV+I+PR ALG+AQY P + L ++++
Sbjct: 610 VAYHEAGHAVCGWYLKYADPLLKVSIIPRGQGALGYAQYLPGDIFLLTEQQL 661
Score = 43 (20.2 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
Identities = 12/58 (20%), Positives = 30/58 (51%)
Query: 119 LEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKE 176
+ K+V K +E+ + + ++ + K E +++ E + K++ +I E + K+E
Sbjct: 73 IRKQV--EKYIEQTKNNTIPANWKEQKRKIDESIRRLEDAVLKQESNRIQEERKEKEE 128
Score = 42 (19.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/62 (24%), Positives = 27/62 (43%)
Query: 168 DAELRHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSV 227
DA+L + D E + + ++ K + KN + E + + ES ++L L
Sbjct: 57 DAKLNKEIPTDEEVEAIRKQVEKYIEQTKNNTIPANWKEQKRKIDESIRRLEDAVLKQES 116
Query: 228 NR 229
NR
Sbjct: 117 NR 118
Score = 38 (18.4 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 257 EEGRNLNIPASFKMMKKQ 274
E+ +N IPA++K K++
Sbjct: 82 EQTKNNTIPANWKEQKRK 99
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 246 (91.7 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 50/89 (56%), Positives = 63/89 (70%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
MEFV +LK PE +Q LGAK+P+GA+L GPPG GKTLLAKA A E+ VPF S++GSEF+EM
Sbjct: 415 MEFVSFLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESGVPFFSVSGSEFVEM 474
Query: 61 IGGLGAARVRTEVVFLH----CRVFLHEI 85
G+G +RVR C +F+ EI
Sbjct: 475 FVGVGPSRVRDLFANARKNTPCIIFIDEI 503
Score = 139 (54.0 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 406
R VA+HE+GHA+ GW D LLKV+I+PR ALG+AQY P+ Y
Sbjct: 662 RTVAYHEAGHAICGWYFRWADPLLKVSIIPRGQGALGYAQYLPANGDTY 710
Score = 139 (54.0 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
R VA+HE+GHA+ GW D LLKV+I+PR ALG+AQY P+ Y
Sbjct: 662 RTVAYHEAGHAICGWYFRWADPLLKVSIIPRGQGALGYAQYLPANGDTY 710
Score = 139 (54.0 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 543
K VA+HE+GHA+ GW D LLKV+I+PR ALG+AQY P+ Y
Sbjct: 661 KRTVAYHEAGHAICGWYFRWADPLLKVSIIPRGQGALGYAQYLPANGDTY 710
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 230 (86.0 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P Y LGA++PKG LL G PG GKTLLA+A+A EA VPF S++GS+F+EM
Sbjct: 172 EIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMF 231
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA+RVR E + C VF+ EI
Sbjct: 232 VGVGASRVRDLFEQAKKNAPCIVFIDEI 259
Score = 145 (56.1 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPID 416
R VA+HE+GHA+VG+LLPHTD + K++I+PR A G+ P E + Y K ++ I
Sbjct: 415 RLVAYHEAGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDRSYMTKSQLLDEIT 473
Query: 417 TSRSHRVLRKWVLSSLLT 434
RV VL + T
Sbjct: 474 MLLGGRVAEALVLEDIST 491
Score = 138 (53.6 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEETLD 550
K VA+HE+GHA+VG+LLPHTD + K++I+PR A G+ P E + Y K + LD
Sbjct: 414 KRLVAYHEAGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDRSYMTKSQLLD 470
Score = 132 (51.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
R VA+HE+GHA+VG+LLPHTD + K++I+PR A G+ P E + Y
Sbjct: 415 RLVAYHEAGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDRSY 462
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 230 (86.0 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P Y LGA++PKG LL G PG GKTLLA+A+A EA VPF S++GS+F+EM
Sbjct: 172 EIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGEAGVPFFSISGSDFVEMF 231
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA+RVR E + C VF+ EI
Sbjct: 232 VGVGASRVRDLFEQAKKNAPCIVFIDEI 259
Score = 145 (56.1 bits), Expect = 4.7e-26, Sum P(2) = 4.7e-26
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPID 416
R VA+HE+GHA+VG+LLPHTD + K++I+PR A G+ P E + Y K ++ I
Sbjct: 415 RLVAYHEAGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDRSYMTKSQLLDEIT 473
Query: 417 TSRSHRVLRKWVLSSLLT 434
RV VL + T
Sbjct: 474 MLLGGRVAEALVLEDIST 491
Score = 138 (53.6 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEETLD 550
K VA+HE+GHA+VG+LLPHTD + K++I+PR A G+ P E + Y K + LD
Sbjct: 414 KRLVAYHEAGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDRSYMTKSQLLD 470
Score = 132 (51.5 bits), Expect = 1.1e-24, Sum P(2) = 1.1e-24
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
R VA+HE+GHA+VG+LLPHTD + K++I+PR A G+ P E + Y
Sbjct: 415 RLVAYHEAGHAMVGYLLPHTDPVHKISIIPR-GRAGGYTLLLPEEDRSY 462
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 248 (92.4 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 46/70 (65%), Positives = 59/70 (84%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
ME V++LK+PE + +GAK+PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 240 MEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 299
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 300 FVGVGASRVR 309
Score = 116 (45.9 bits), Expect = 7.7e-25, Sum P(2) = 7.7e-25
Identities = 40/119 (33%), Positives = 64/119 (53%)
Query: 299 DILNLKLNLEKEVMLRKKLEEEYSI-ELGSPIDTSRSHRVLRKWVLSSLLTVNKFASLVC 357
D+ NL LN E ++ ++ S E+ ID R++ + +++T K SLV
Sbjct: 435 DLANL-LN-EAAILAGRRARTSISSKEIDDSID-----RIVAG-MEGTVMTDGKSKSLV- 485
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPI 415
A+HE GHA+ G L P DA+ KVT++PR A G + PS+ L +K+++F+ I
Sbjct: 486 ---AYHEVGHAVCGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDDPTLISKQQLFARI 540
Score = 106 (42.4 bits), Expect = 8.5e-24, Sum P(2) = 8.5e-24
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEE 547
+K VA+HE GHA+ G L P DA+ KVT++PR A G + PS+ L +K++
Sbjct: 481 SKSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDDPTLISKQQ 535
Score = 105 (42.0 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 431 SLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
+++T K SLV A+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 474 TVMTDGKSKSLV----AYHEVGHAVCGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDDP 528
Query: 491 -LYNKEEV 497
L +K+++
Sbjct: 529 TLISKQQL 536
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 244 (91.0 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 45/70 (64%), Positives = 59/70 (84%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
ME V++LK+PE + +GA++PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 233 MEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEM 292
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 293 FVGVGASRVR 302
Score = 116 (45.9 bits), Expect = 2.0e-24, Sum P(2) = 2.0e-24
Identities = 29/72 (40%), Positives = 44/72 (61%)
Query: 345 SLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 404
+++T K SLV A+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 467 TVMTDGKSKSLV----AYHEVGHAICGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDDP 521
Query: 405 -LYNKEEIFSPI 415
L +K+++F+ I
Sbjct: 522 TLISKQQLFARI 533
Score = 107 (42.7 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEE 547
+K VA+HE GHA+ G L P DA+ KVT++PR A G + PS+ L +K++
Sbjct: 474 SKSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDDPTLISKQQ 528
Score = 106 (42.4 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 431 SLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
+++T K SLV A+HE GHA+ G L P DA+ KVT++PR A G + PS+
Sbjct: 467 TVMTDGKSKSLV----AYHEVGHAICGTLTPGHDAVQKVTLIPRGQ-ARGLTWFIPSDDP 521
Query: 491 -LYNKEEV 497
L +K+++
Sbjct: 522 TLISKQQL 529
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 247 (92.0 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 49/69 (71%), Positives = 57/69 (82%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK PE Y LGAK+PKG LL+GPPG GKTLLAKAVA EA+VPF S++GS FIEM
Sbjct: 192 EIVDFLKYPERYIKLGAKIPKGLLLVGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMF 251
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 252 VGVGASRVR 260
Score = 108 (43.1 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTS 418
V +HE GHAL+ + KV+++PR ALG+ TP E K L K E+ + +D
Sbjct: 439 VTYHECGHALIAETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELIAEVDVL 498
Query: 419 RSHRVLRKWVLSSLLT 434
R + + + T
Sbjct: 499 LGGRAAEEVFIGEIST 514
Score = 99 (39.9 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEETL 549
K+ V +HE GHAL+ + KV+++PR ALG+ TP E K L K E +
Sbjct: 436 KKIVTYHECGHALIAETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHELI 492
Score = 96 (38.9 bits), Expect = 9.1e-23, Sum P(2) = 9.1e-23
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV 497
V +HE GHAL+ + KV+++PR ALG+ TP E K L K E+
Sbjct: 439 VTYHECGHALIAETTKGAKRVSKVSVIPRGLAALGYTLNTPEENKFLMQKHEL 491
Score = 87 (35.7 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 42/190 (22%), Positives = 89/190 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNREL-HIVKMETQLRAYESDKKLARKQLIDSVNREI 231
H K++ + ++ + +I +L + L +L +I+ L +S K + + L+++V R I
Sbjct: 362 HMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDSKKYVEQNDLVEAVERAI 421
Query: 232 AETILLKNFAHQLIVKCPLMMTYSSEEGRNL--NIPASFKMMKKQNFLPQTSTASNVNQS 289
A L+ + ++ K ++TY E G L K + K + +P+ A + +
Sbjct: 422 AG---LEKKSRRINEKEKKIVTYH-ECGHALIAETTKGAKRVSKVSVIPRGLAA--LGYT 475
Query: 290 HNIPQEIYDDILNLKLNLEKEVMLRKKLEEEY---SIELGSPIDTSRSHRVLRKWVLSSL 346
N P+E + +L E +V+L + EE I G+ D R+ +++ + S+
Sbjct: 476 LNTPEENKFLMQKHELIAEVDVLLGGRAAEEVFIGEISTGASNDLERATDIIKAMI--SM 533
Query: 347 LTVNKFASLV 356
+++ A L+
Sbjct: 534 YGMSEIAGLM 543
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 232 (86.7 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VDYL+ P +Q LG K+P G L++GPPG GKTLLAKA+A EA VPF +++GS+F+EM
Sbjct: 170 ELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMF 229
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 230 VGVGASRVR 238
Score = 124 (48.7 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
KE A+HE+GHA+VG L+P D + KV+I+PR ALG Y P + ++ ++ L+
Sbjct: 412 KESTAYHEAGHAVVGRLVPEHDPVYKVSIIPR-GRALGVTMYLPEQDRVSMSKQHLE 467
Score = 116 (45.9 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GHA+VG L+P D + KV+I+PR ALG Y P + ++ +K+ + S I +
Sbjct: 416 AYHEAGHAVVGRLVPEHDPVYKVSIIPR-GRALGVTMYLPEQDRVSMSKQHLESMISSLY 474
Query: 420 SHRVLRKWV 428
R+ + +
Sbjct: 475 GGRLAEELI 483
Score = 111 (44.1 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
A+HE+GHA+VG L+P D + KV+I+PR ALG Y P + ++
Sbjct: 416 AYHEAGHAVVGRLVPEHDPVYKVSIIPR-GRALGVTMYLPEQDRV 459
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 232 (86.7 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VDYL+ P +Q LG K+P G L++GPPG GKTLLAKA+A EA VPF +++GS+F+EM
Sbjct: 170 ELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMF 229
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 230 VGVGASRVR 238
Score = 124 (48.7 bits), Expect = 5.3e-24, Sum P(2) = 5.3e-24
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
KE A+HE+GHA+VG L+P D + KV+I+PR ALG Y P + ++ ++ L+
Sbjct: 412 KESTAYHEAGHAVVGRLVPEHDPVYKVSIIPR-GRALGVTMYLPEQDRVSMSKQHLE 467
Score = 116 (45.9 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 25/69 (36%), Positives = 42/69 (60%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GHA+VG L+P D + KV+I+PR ALG Y P + ++ +K+ + S I +
Sbjct: 416 AYHEAGHAVVGRLVPEHDPVYKVSIIPR-GRALGVTMYLPEQDRVSMSKQHLESMISSLY 474
Query: 420 SHRVLRKWV 428
R+ + +
Sbjct: 475 GGRLAEELI 483
Score = 111 (44.1 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
A+HE+GHA+VG L+P D + KV+I+PR ALG Y P + ++
Sbjct: 416 AYHEAGHAVVGRLVPEHDPVYKVSIIPR-GRALGVTMYLPEQDRV 459
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 228 (85.3 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E + +LK P+ + LG ++PKG LL+GPPG GKTLLA+AVA EA VPF S++GS+F+EM
Sbjct: 167 EIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMF 226
Query: 62 GGLGAARVRTEVVF----LHCRVFLHEI 85
G+GA+RVR V C +F+ EI
Sbjct: 227 VGVGASRVRDLFVQGKKNAPCIIFIDEI 254
Score = 129 (50.5 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPID 416
+ A+HE+GH LV L+P TD + KV+I+PR ALG P E K YNKE + + I
Sbjct: 410 KNTAYHEAGHTLVAKLIPGTDPVHKVSIIPR-GRALGVTMQLPIEDKHSYNKESLLNRIA 468
Query: 417 TSRSHRVLRKWVLSSLLT 434
R + + + L T
Sbjct: 469 VLMGGRAAEEIIFNELTT 486
Score = 125 (49.1 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEETLD 550
K+ A+HE+GH LV L+P TD + KV+I+PR ALG P E K YNKE L+
Sbjct: 409 KKNTAYHEAGHTLVAKLIPGTDPVHKVSIIPR-GRALGVTMQLPIEDKHSYNKESLLN 465
Score = 118 (46.6 bits), Expect = 1.1e-22, Sum P(3) = 1.1e-22
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV 497
+ A+HE+GH LV L+P TD + KV+I+PR ALG P E K YNKE +
Sbjct: 410 KNTAYHEAGHTLVAKLIPGTDPVHKVSIIPR-GRALGVTMQLPIEDKHSYNKESL 463
Score = 38 (18.4 bits), Expect = 8.2e-24, Sum P(3) = 8.2e-24
Identities = 16/71 (22%), Positives = 26/71 (36%)
Query: 161 KEKVLKIDAELRHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLAR 220
+E +LK+ H K+ L + L I + +L V E L A DK
Sbjct: 328 REMILKV-----HTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVE 382
Query: 221 KQLIDSVNREI 231
+ D ++
Sbjct: 383 MKDFDDAKDKV 393
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 232 (86.7 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 45/69 (65%), Positives = 56/69 (81%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VDYL+ P+ +Q +G KVPKG LL+GPPG GKTLLA+AVA EA+V FLS++ S+FIEM
Sbjct: 189 EIVDYLRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGEADVTFLSISASQFIEMF 248
Query: 62 GGLGAARVR 70
G+GA RVR
Sbjct: 249 VGVGAGRVR 257
Score = 120 (47.3 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
Identities = 29/78 (37%), Positives = 41/78 (52%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPID 416
R A+HE+GH +V LLP TD + KVTI+PR ALG Q P + + Y K + + +
Sbjct: 431 RITAYHEAGHTIVAKLLPGTDPVHKVTIIPRGQ-ALGVTQQLPEDDRYHYPKSYLMNRLS 489
Query: 417 TSRSHRVLRKWVLSSLLT 434
+ R + V L T
Sbjct: 490 VALGGRQAERAVFGDLST 507
Score = 114 (45.2 bits), Expect = 4.8e-23, Sum P(2) = 4.8e-23
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
R A+HE+GH +V LLP TD + KVTI+PR ALG Q P + + + + +
Sbjct: 431 RITAYHEAGHTIVAKLLPGTDPVHKVTIIPRGQ-ALGVTQQLPEDDRYHYPKSYLMNRLS 489
Query: 504 HALVG 508
AL G
Sbjct: 490 VALGG 494
Score = 113 (44.8 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 488 EQKLYNKEE----VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 543
E+K++ E+ A+HE+GH +V LLP TD + KVTI+PR ALG Q P + + +
Sbjct: 420 ERKMFITEQEKRITAYHEAGHTIVAKLLPGTDPVHKVTIIPRGQ-ALGVTQQLPEDDRYH 478
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 232 (86.7 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 45/69 (65%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P+ Y LGAK+PKG LL+GPPG GKTLLA+AVA EA VPF S SEF+E+
Sbjct: 264 EVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELF 323
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 324 VGVGASRVR 332
Score = 122 (48.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 487 SEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
SE+K K VA+HE+GHALVG L+P D + K++I+PR A G + PSE++L
Sbjct: 502 SEEK---KRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERL 553
Score = 120 (47.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 405
R VA+HE+GHALVG L+P D + K++I+PR A G + PSE++L
Sbjct: 507 RLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERL 553
Score = 120 (47.3 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
R VA+HE+GHALVG L+P D + K++I+PR A G + PSE++L
Sbjct: 507 RLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERL 553
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 232 (86.7 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 45/69 (65%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P+ Y LGAK+PKG LL+GPPG GKTLLA+AVA EA VPF S SEF+E+
Sbjct: 276 EVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELF 335
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 336 VGVGASRVR 344
Score = 122 (48.0 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 487 SEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
SE+K K VA+HE+GHALVG L+P D + K++I+PR A G + PSE++L
Sbjct: 514 SEEK---KRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERL 565
Score = 120 (47.3 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 405
R VA+HE+GHALVG L+P D + K++I+PR A G + PSE++L
Sbjct: 519 RLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERL 565
Score = 120 (47.3 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
R VA+HE+GHALVG L+P D + K++I+PR A G + PSE++L
Sbjct: 519 RLVAYHEAGHALVGALMPEYDPVAKISIIPRGQ-AGGLTFFAPSEERL 565
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 236 (88.1 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 42/69 (60%), Positives = 56/69 (81%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V+YL+ P +Q LG K+PKG L++GPPG GKTLLAKA+A EA VPF +++GS+F+EM
Sbjct: 166 ELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMF 225
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 226 VGVGASRVR 234
Score = 114 (45.2 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-------SEQKLYNKE 546
KE A+HE+GHA++G L+P D + KVTI+PR ALG + P S QKL ++
Sbjct: 408 KESTAYHEAGHAIIGRLVPEHDPVHKVTIIPR-GRALGVTFFLPEGDAISASRQKLESQI 466
Query: 547 ETL 549
TL
Sbjct: 467 STL 469
Score = 106 (42.4 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPIDT 417
A+HE+GHA++G L+P D + KVTI+PR ALG + P + +++++ S I T
Sbjct: 412 AYHEAGHAIIGRLVPEHDPVHKVTIIPR-GRALGVTFFLPEGDAISASRQKLESQIST 468
Score = 101 (40.6 bits), Expect = 4.6e-22, Sum P(2) = 4.6e-22
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP 486
A+HE+GHA++G L+P D + KVTI+PR ALG + P
Sbjct: 412 AYHEAGHAIIGRLVPEHDPVHKVTIIPR-GRALGVTFFLP 450
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 238 (88.8 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V +LK+PE + +GAK+PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 186 EVVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 245
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 246 VGVGASRVR 254
Score = 114 (45.2 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPI 415
R +A+HE GHA+VG LL D + KVT++PR A G +TP+E++ L K ++ + I
Sbjct: 428 RLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQ-AQGLTWFTPNEEQGLTTKAQLMARI 485
Score = 111 (44.1 bits), Expect = 5.1e-23, Sum P(3) = 5.1e-23
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEVAFHES 502
R +A+HE GHA+VG LL D + KVT++PR A G +TP+E++ L K ++ +
Sbjct: 428 RLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQ-AQGLTWFTPNEEQGLTTKAQLMARIA 486
Query: 503 G 503
G
Sbjct: 487 G 487
Score = 110 (43.8 bits), Expect = 6.4e-23, Sum P(3) = 6.4e-23
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
+K +A+HE GHA+VG LL D + KVT++PR A G +TP+E++
Sbjct: 426 SKRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQ-AQGLTWFTPNEEQ 473
Score = 38 (18.4 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 209 LRAYESDKKLARKQLIDSVNR 229
L + +KKLA + IDS+ R
Sbjct: 351 LEVHARNKKLAPEVSIDSIAR 371
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 234 (87.4 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++L+ P+ + LG K+PKGALL+GPPG GKTLLA+A+A EA VPF +++GS+F+EM
Sbjct: 170 EIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMF 229
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA+RVR E + C VF+ EI
Sbjct: 230 VGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Score = 114 (45.2 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLDPKK 553
KE+ A+HE+GHA+VG LP D + K TI+PR ALG P +L + K
Sbjct: 412 KEKTAYHEAGHAVVGLALPMCDPVYKATIIPRGG-ALGMVVSLPEMDRLNWHRDECQQKL 470
Query: 554 EMTV 557
MT+
Sbjct: 471 AMTM 474
Score = 102 (41.0 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 359 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEE 410
+ A+HE+GHA+VG LP D + K TI+PR ALG P +L ++++E
Sbjct: 414 KTAYHEAGHAVVGLALPMCDPVYKATIIPRGG-ALGMVVSLPEMDRLNWHRDE 465
Score = 102 (41.0 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 445 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEE 496
+ A+HE+GHA+VG LP D + K TI+PR ALG P +L ++++E
Sbjct: 414 KTAYHEAGHAVVGLALPMCDPVYKATIIPRGG-ALGMVVSLPEMDRLNWHRDE 465
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 234 (87.4 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 47/88 (53%), Positives = 65/88 (73%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++L+ P+ + LG K+PKGALL+GPPG GKTLLA+A+A EA VPF +++GS+F+EM
Sbjct: 170 EIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMF 229
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA+RVR E + C VF+ EI
Sbjct: 230 VGVGASRVRDMFEQAKKNAPCIVFIDEI 257
Score = 114 (45.2 bits), Expect = 3.3e-23, Sum P(2) = 3.3e-23
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLDPKK 553
KE+ A+HE+GHA+VG LP D + K TI+PR ALG P +L + K
Sbjct: 412 KEKTAYHEAGHAVVGLALPMCDPVYKATIIPRGG-ALGMVVSLPEMDRLNWHRDECQQKL 470
Query: 554 EMTV 557
MT+
Sbjct: 471 AMTM 474
Score = 102 (41.0 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 359 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEE 410
+ A+HE+GHA+VG LP D + K TI+PR ALG P +L ++++E
Sbjct: 414 KTAYHEAGHAVVGLALPMCDPVYKATIIPRGG-ALGMVVSLPEMDRLNWHRDE 465
Score = 102 (41.0 bits), Expect = 5.9e-22, Sum P(2) = 5.9e-22
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 445 QVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEE 496
+ A+HE+GHA+VG LP D + K TI+PR ALG P +L ++++E
Sbjct: 414 KTAYHEAGHAVVGLALPMCDPVYKATIIPRGG-ALGMVVSLPEMDRLNWHRDE 465
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 228 (85.3 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 42/70 (60%), Positives = 57/70 (81%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E V++LK P + +GA++PKG LL+GPPG GKTLLA+AVA EA VPF S++GS+F+EM
Sbjct: 175 VEVVEFLKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEM 234
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 235 FVGVGASRVR 244
Score = 120 (47.3 bits), Expect = 3.5e-23, Sum P(2) = 3.5e-23
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 306 NLEKEVMLRKKLEEEYSIELGSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQVAFHES 365
NL E L +++ I++ S ID + + RV+ S + K ++V AFHE+
Sbjct: 373 NLLNEAALVAARQDKKKIDM-SDIDEA-TDRVIAGPAKKSRVISEKERNIV----AFHEA 426
Query: 366 GHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPIDTSRSHRVL 424
GH ++G +L D + KVTIVPR A G+A P E + + K E+ I RV
Sbjct: 427 GHTVIGVVLDEADVVHKVTIVPRGQ-AGGYAVMLPKEDRYFMTKPELLDKITGLLGGRVA 485
Query: 425 RKWVLSSLLT 434
+ V + T
Sbjct: 486 EEIVFGEVST 495
Score = 114 (45.2 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 497 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEETLD 550
VAFHE+GH ++G +L D + KVTIVPR A G+A P E + + K E LD
Sbjct: 421 VAFHEAGHTVIGVVLDEADVVHKVTIVPRGQ-AGGYAVMLPKEDRYFMTKPELLD 474
Score = 106 (42.4 bits), Expect = 5.7e-22, Sum P(3) = 5.7e-22
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEV 497
VAFHE+GH ++G +L D + KVTIVPR A G+A P E + + K E+
Sbjct: 421 VAFHEAGHTVIGVVLDEADVVHKVTIVPRGQ-AGGYAVMLPKEDRYFMTKPEL 472
Score = 48 (22.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 37/149 (24%), Positives = 64/149 (42%)
Query: 52 MNGSEFIEMIGGLGAARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLETKIILSSFM 111
M E ++ I GL RV E+VF H F T I + T+ +S +
Sbjct: 467 MTKPELLDKITGLLGGRVAEEIVFGEVSTGAHND--FQRATGIARRMV---TEFGMSDKL 521
Query: 112 -MIVLKLNLEKEVMLRKKL--EEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKID 168
+ + +V L + E+ YS + ++ DME+ + + K+ C + K + D
Sbjct: 522 GPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEI-DMEM---QTIMKE--CYARAKQILTD 575
Query: 169 AELRHKKELDLERQILLHEITKLKSELKN 197
++ +LDL + LL E+ L +E N
Sbjct: 576 ----NRDKLDLIAKTLL-EVETLDAEQIN 599
Score = 44 (20.5 bits), Expect = 8.6e-23, Sum P(3) = 8.6e-23
Identities = 23/73 (31%), Positives = 31/73 (42%)
Query: 161 KEKVLKIDAELRHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLAR 220
+E VLK+ A R+K L+ I L I +L + E L A DKK
Sbjct: 337 REAVLKVHA--RNKP---LDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKID 391
Query: 221 KQLID-SVNREIA 232
ID + +R IA
Sbjct: 392 MSDIDEATDRVIA 404
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 225 (84.3 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 41/69 (59%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VDYL+ P +Q LG ++P G LL+G PG GKTLLAKA+A EA VPF +++GS+F+EM
Sbjct: 168 ELVDYLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMF 227
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 228 VGVGASRVR 236
Score = 122 (48.0 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GHA++G L+P D + KV+I+PR ALG Y P + + ++K+ + S I +
Sbjct: 414 AYHEAGHAIIGRLVPDHDPVYKVSIIPR-GRALGVTMYLPEQDRFSHSKQHLESNISSLY 472
Query: 420 SHRVLRKWVLSS 431
RV + + S
Sbjct: 473 GGRVAEEVIYGS 484
Score = 120 (47.3 bits), Expect = 8.9e-23, Sum P(2) = 8.9e-23
Identities = 22/57 (38%), Positives = 37/57 (64%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
+E A+HE+GHA++G L+P D + KV+I+PR ALG Y P + + + ++ L+
Sbjct: 410 REMTAYHEAGHAIIGRLVPDHDPVYKVSIIPR-GRALGVTMYLPEQDRFSHSKQHLE 465
Score = 111 (44.1 bits), Expect = 7.7e-22, Sum P(2) = 7.7e-22
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
A+HE+GHA++G L+P D + KV+I+PR ALG Y P + + + ++
Sbjct: 414 AYHEAGHAIIGRLVPDHDPVYKVSIIPR-GRALGVTMYLPEQDRFSHSKQ 462
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 230 (86.0 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 48/89 (53%), Positives = 64/89 (71%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E V++LK P + LGA++PKG LL+GPPG GKTLLAKA A EA VPF S++GS+F+EM
Sbjct: 174 VEVVEFLKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEM 233
Query: 61 IGGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA+RVR E + C +F+ EI
Sbjct: 234 FVGVGASRVRDLFENAKKNAPCLIFIDEI 262
Score = 111 (44.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 488 EQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN 544
+ ++ +K+E VA+HE GH ++G +L D + KVTIVPR A G+A P E + +
Sbjct: 408 KSRVISKKERNIVAYHEGGHTVIGLVLDEADMVHKVTIVPRGQ-AGGYAVMLPREDRYFQ 466
Query: 545 -KEETLD 550
K E LD
Sbjct: 467 TKPELLD 473
Score = 107 (42.7 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN-KEEIFSPIDTS 418
VA+HE GH ++G +L D + KVTIVPR A G+A P E + + K E+ I
Sbjct: 420 VAYHEGGHTVIGLVLDEADMVHKVTIVPRGQ-AGGYAVMLPREDRYFQTKPELLDKIVGL 478
Query: 419 RSHRVLRKWVLSSLLT 434
RV + + + T
Sbjct: 479 LGGRVAEEIIFGEVST 494
Score = 101 (40.6 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN-KEEV 497
VA+HE GH ++G +L D + KVTIVPR A G+A P E + + K E+
Sbjct: 420 VAYHEGGHTVIGLVLDEADMVHKVTIVPRGQ-AGGYAVMLPREDRYFQTKPEL 471
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 225 (84.3 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 40/69 (57%), Positives = 55/69 (79%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VDYL+ P +Q LG ++P G L++GPPG GKTLLAKA+A E+ VPF +++GS+F+EM
Sbjct: 171 ELVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAGESKVPFFTISGSDFVEMF 230
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 231 VGVGASRVR 239
Score = 114 (45.2 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETLD 550
KE A+HE+GHA+VG L+P D + KVTI+PR ALG + P + L+
Sbjct: 413 KEMTAYHEAGHAIVGCLVPEHDPVHKVTIIPR-GRALGVTFFLPEADAISQSRRKLE 468
Score = 107 (42.7 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GHA+VG L+P D + KVTI+PR ALG + P + ++ ++ S I +
Sbjct: 417 AYHEAGHAIVGCLVPEHDPVHKVTIIPR-GRALGVTFFLPEADAISQSRRKLESQISVAY 475
Query: 420 SHRVLRKWV 428
R+ + +
Sbjct: 476 GGRLAEELI 484
Score = 104 (41.7 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTP-------SEQKLYNKEEVAF 499
A+HE+GHA+VG L+P D + KVTI+PR ALG + P S +KL ++ VA+
Sbjct: 417 AYHEAGHAIVGCLVPEHDPVHKVTIIPR-GRALGVTFFLPEADAISQSRRKLESQISVAY 475
Score = 40 (19.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 126 RKKLEEEYSIELGRKLQDMEIKHAEEL 152
R+KLE + S+ G +L + I E++
Sbjct: 464 RRKLESQISVAYGGRLAEELIYGTEKV 490
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 234 (87.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 46/89 (51%), Positives = 61/89 (68%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD++K E Y +GA++PKG LL+GPPG GKT+LA+AVATEANVP++ +G EFIE+
Sbjct: 162 LEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI 221
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G GA R+R +F H R I D
Sbjct: 222 YVGQGAKRIRQ--LFAHARSVAPSIVFID 248
Score = 99 (39.9 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 358 RQVAFHESGHALVGWLL-PHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPI 415
R A+HE+GHA+V + L P TD + K TI+ R + ALG+ + P + + Y K ++ + +
Sbjct: 409 RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGN-ALGYVEQIPVDDRHNYFKSQMEAKL 467
Query: 416 DTSRSHRVLRKWVLSSLLTVNKFASLVCR--QVAF 448
R + V T + +S + R ++A+
Sbjct: 468 AVCMGGRTAEEIVFGKSETSSGASSDISRATEIAY 502
Score = 96 (38.9 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 444 RQVAFHESGHALVGWLL-PHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
R A+HE+GHA+V + L P TD + K TI+ R + ALG+ + P + +
Sbjct: 409 RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGN-ALGYVEQIPVDDR 455
Score = 96 (38.9 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 489 QKLYNKEEVAFHESGHALVGWLL-PHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
Q + + A+HE+GHA+V + L P TD + K TI+ R + ALG+ + P + +
Sbjct: 403 QSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGN-ALGYVEQIPVDDR 455
Score = 55 (24.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 26/123 (21%), Positives = 57/123 (46%)
Query: 119 LEKEVM----LRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHK 174
L+KE + ++ ++ S K++ ++ + KK + + + D + K
Sbjct: 574 LDKETLSGEEIKNIIDPNNSKNYSGKVEMLKNDTKKNEKKSNSVSKNKSTISEDYD---K 630
Query: 175 KELDLERQILLHEITKLKSE--LKNRELHIVKMETQLRAYESDKKLARKQLIDS-VN-RE 230
+ ++E+ H+ T +K+E L N + I T+ SD + RK++ D +N +E
Sbjct: 631 NQNNVEQNYQSHDHTLVKNEENLNNMKNDIDDNNTRDGQVNSDSFVKRKEVTDQDINGKE 690
Query: 231 IAE 233
++E
Sbjct: 691 LSE 693
Score = 54 (24.1 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 126 RKKLEEEYSIELGRKLQDMEIKHAE-ELKKQEQCLRKEKVLKIDAELRHKKELDLERQIL 184
+K++ + YS +L + E E+K + K K L + RH+KELD L
Sbjct: 520 KKRMGDGYS---SNRLSAQTVSSIEVEVKS---LVEKGKSLSEEILRRHRKELDNLAFAL 573
Query: 185 LHEITKLKSELKN 197
L + T E+KN
Sbjct: 574 LDKETLSGEEIKN 586
Score = 51 (23.0 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 104 KIILSSFMMIVLKLNLEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEK 163
KII+ + M +K N+++ + KK + + S + + + +H +ELK Q++ + K
Sbjct: 712 KIIIDNDKMGDMKKNIKEVIKKMKKKQSKGSYKTYKNVLKSVSEH-KELKTQKKA-DENK 769
Query: 164 VLKIDAELRHKKELD 178
++ + E LD
Sbjct: 770 IVADNNEKSSNNSLD 784
Score = 37 (18.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 128 KLEEEYSIELGRKLQDMEIKHAEELKK 154
K +E Y + IK+ +E+KK
Sbjct: 834 KTKENYFDNFNEVIDISHIKNVDEMKK 860
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 234 (87.4 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 46/89 (51%), Positives = 61/89 (68%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD++K E Y +GA++PKG LL+GPPG GKT+LA+AVATEANVP++ +G EFIE+
Sbjct: 162 LEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLARAVATEANVPYIYTSGPEFIEI 221
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G GA R+R +F H R I D
Sbjct: 222 YVGQGAKRIRQ--LFAHARSVAPSIVFID 248
Score = 99 (39.9 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 358 RQVAFHESGHALVGWLL-PHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPI 415
R A+HE+GHA+V + L P TD + K TI+ R + ALG+ + P + + Y K ++ + +
Sbjct: 409 RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGN-ALGYVEQIPVDDRHNYFKSQMEAKL 467
Query: 416 DTSRSHRVLRKWVLSSLLTVNKFASLVCR--QVAF 448
R + V T + +S + R ++A+
Sbjct: 468 AVCMGGRTAEEIVFGKSETSSGASSDISRATEIAY 502
Score = 96 (38.9 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 444 RQVAFHESGHALVGWLL-PHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
R A+HE+GHA+V + L P TD + K TI+ R + ALG+ + P + +
Sbjct: 409 RITAYHEAGHAIVAYFLQPKTDPIHKATIISRGN-ALGYVEQIPVDDR 455
Score = 96 (38.9 bits), Expect = 7.5e-21, Sum P(2) = 7.5e-21
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 489 QKLYNKEEVAFHESGHALVGWLL-PHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
Q + + A+HE+GHA+V + L P TD + K TI+ R + ALG+ + P + +
Sbjct: 403 QSDHQRRITAYHEAGHAIVAYFLQPKTDPIHKATIISRGN-ALGYVEQIPVDDR 455
Score = 55 (24.4 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 26/123 (21%), Positives = 57/123 (46%)
Query: 119 LEKEVM----LRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHK 174
L+KE + ++ ++ S K++ ++ + KK + + + D + K
Sbjct: 574 LDKETLSGEEIKNIIDPNNSKNYSGKVEMLKNDTKKNEKKSNSVSKNKSTISEDYD---K 630
Query: 175 KELDLERQILLHEITKLKSE--LKNRELHIVKMETQLRAYESDKKLARKQLIDS-VN-RE 230
+ ++E+ H+ T +K+E L N + I T+ SD + RK++ D +N +E
Sbjct: 631 NQNNVEQNYQSHDHTLVKNEENLNNMKNDIDDNNTRDGQVNSDSFVKRKEVTDQDINGKE 690
Query: 231 IAE 233
++E
Sbjct: 691 LSE 693
Score = 54 (24.1 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 22/73 (30%), Positives = 34/73 (46%)
Query: 126 RKKLEEEYSIELGRKLQDMEIKHAE-ELKKQEQCLRKEKVLKIDAELRHKKELDLERQIL 184
+K++ + YS +L + E E+K + K K L + RH+KELD L
Sbjct: 520 KKRMGDGYS---SNRLSAQTVSSIEVEVKS---LVEKGKSLSEEILRRHRKELDNLAFAL 573
Query: 185 LHEITKLKSELKN 197
L + T E+KN
Sbjct: 574 LDKETLSGEEIKN 586
Score = 51 (23.0 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 104 KIILSSFMMIVLKLNLEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEK 163
KII+ + M +K N+++ + KK + + S + + + +H +ELK Q++ + K
Sbjct: 712 KIIIDNDKMGDMKKNIKEVIKKMKKKQSKGSYKTYKNVLKSVSEH-KELKTQKKA-DENK 769
Query: 164 VLKIDAELRHKKELD 178
++ + E LD
Sbjct: 770 IVADNNEKSSNNSLD 784
Score = 37 (18.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 128 KLEEEYSIELGRKLQDMEIKHAEELKK 154
K +E Y + IK+ +E+KK
Sbjct: 834 KTKENYFDNFNEVIDISHIKNVDEMKK 860
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 239 (89.2 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 43/69 (62%), Positives = 57/69 (82%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++L+ P+ +Q LG K+PKG LL+GPPG GKTLLAKA+A EA VPF S++GS+F+EM
Sbjct: 171 EIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMF 230
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 231 VGVGASRVR 239
Score = 88 (36.0 bits), Expect = 4.6e-21, Sum P(2) = 4.6e-21
Identities = 34/123 (27%), Positives = 56/123 (45%)
Query: 380 LLKVTIVPRTSLALGFAQYTP--SEQKLYNKEEIFSPIDTSRSHRVLR----KWVLSSLL 433
L K+ P +++ A+ TP S L N + I R+ +V+ ++ +L
Sbjct: 340 LKKIPTAPNVEVSI-IARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYARDKIL 398
Query: 434 TVNKFASLVCRQ-----VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSE 488
+ SLV R+ A+HE+GHA+ L +D + K TI+PR ALG P
Sbjct: 399 MGMERKSLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATIIPR-GRALGLVMRLPEH 457
Query: 489 QKL 491
++
Sbjct: 458 DRV 460
Score = 87 (35.7 bits), Expect = 5.9e-21, Sum P(2) = 5.9e-21
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 354 SLVCRQ-----VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YN 407
SLV R+ A+HE+GHA+ L +D + K TI+PR ALG P ++ +
Sbjct: 405 SLVMREEEKLLTAYHEAGHAITSLKLEASDPIHKATIIPR-GRALGLVMRLPEHDRVSFT 463
Query: 408 KEEIFSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQVAFHESGHALVGW 458
+ ++ + + + R + + T + AS + +Q A H + + W
Sbjct: 464 RAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDI-KQ-ATHLARSMVTKW 512
Score = 82 (33.9 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 542
A+HE+GHA+ L +D + K TI+PR ALG P ++
Sbjct: 417 AYHEAGHAITSLKLEASDPIHKATIIPR-GRALGLVMRLPEHDRV 460
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 234 (87.4 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 43/70 (61%), Positives = 57/70 (81%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK + +Q LG K+PKG LL+G PG GKTLLA+A+A EANVPF S++GS+F+EM
Sbjct: 169 IEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEM 228
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 229 FVGVGASRVR 238
Score = 92 (37.4 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 18/72 (25%), Positives = 38/72 (52%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPID 416
R A+HE+GHA++ + +D + K TI+PR +LG P ++ + +E++ + +
Sbjct: 413 RLTAYHEAGHAIIAFFTEASDPIHKATIIPR-GRSLGLVMRLPESDRVSHTREKMIADLT 471
Query: 417 TSRSHRVLRKWV 428
+ R + +
Sbjct: 472 VAMGGRAAEELI 483
Score = 88 (36.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
R A+HE+GHA++ + +D + K TI+PR +LG P ++ + E
Sbjct: 413 RLTAYHEAGHAIIAFFTEASDPIHKATIIPR-GRSLGLVMRLPESDRVSHTRE 464
Score = 86 (35.3 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETL 549
A+HE+GHA++ + +D + K TI+PR +LG P ++ + E +
Sbjct: 416 AYHEAGHAIIAFFTEASDPIHKATIIPR-GRSLGLVMRLPESDRVSHTREKM 466
Score = 47 (21.6 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 95 IENIFDLETKIILSSFM---MIVLKLNLEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEE 151
+ N+ D E K+I++S + +L +LE ++ K L E + G +++ I + +E
Sbjct: 534 LANLIDEEVKLIVTSALERAKSLLNEHLESLHIVAKNLLE-FETLTGEDIKN--IINGKE 590
Query: 152 LKKQEQCLRKEKVLK 166
L K + + + +VLK
Sbjct: 591 LTKDD--IEESQVLK 603
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 234 (87.4 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 43/70 (61%), Positives = 57/70 (81%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK + +Q LG K+PKG LL+G PG GKTLLA+A+A EANVPF S++GS+F+EM
Sbjct: 169 IEIVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEM 228
Query: 61 IGGLGAARVR 70
G+GA+RVR
Sbjct: 229 FVGVGASRVR 238
Score = 92 (37.4 bits), Expect = 5.4e-21, Sum P(2) = 5.4e-21
Identities = 18/72 (25%), Positives = 38/72 (52%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPID 416
R A+HE+GHA++ + +D + K TI+PR +LG P ++ + +E++ + +
Sbjct: 413 RLTAYHEAGHAIIAFFTEASDPIHKATIIPR-GRSLGLVMRLPESDRVSHTREKMIADLT 471
Query: 417 TSRSHRVLRKWV 428
+ R + +
Sbjct: 472 VAMGGRAAEELI 483
Score = 88 (36.0 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
R A+HE+GHA++ + +D + K TI+PR +LG P ++ + E
Sbjct: 413 RLTAYHEAGHAIIAFFTEASDPIHKATIIPR-GRSLGLVMRLPESDRVSHTRE 464
Score = 86 (35.3 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETL 549
A+HE+GHA++ + +D + K TI+PR +LG P ++ + E +
Sbjct: 416 AYHEAGHAIIAFFTEASDPIHKATIIPR-GRSLGLVMRLPESDRVSHTREKM 466
Score = 47 (21.6 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 95 IENIFDLETKIILSSFM---MIVLKLNLEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEE 151
+ N+ D E K+I++S + +L +LE ++ K L E + G +++ I + +E
Sbjct: 534 LANLIDEEVKLIVTSALERAKSLLNEHLESLHIVAKNLLE-FETLTGEDIKN--IINGKE 590
Query: 152 LKKQEQCLRKEKVLK 166
L K + + + +VLK
Sbjct: 591 LTKDD--IEESQVLK 603
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 232 (86.7 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 48/89 (53%), Positives = 64/89 (71%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK + + LG K+PKG LL+G PG GKTLLA+A+A EANVPF S++GS+F+EM
Sbjct: 171 IEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEM 230
Query: 61 IGGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA+RVR E H C +F+ EI
Sbjct: 231 FVGVGASRVRDMFEQGKKHAPCIIFVDEI 259
Score = 94 (38.1 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPID 416
R A+HE+GHA+V + P +D + K TI+PR +LG P ++ + +E++ + +
Sbjct: 415 RLTAYHEAGHAVVAFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTREKMLADLT 473
Query: 417 TSRSHRVLRKWV 428
+ R + +
Sbjct: 474 VAMGGRAAEELI 485
Score = 90 (36.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
R A+HE+GHA+V + P +D + K TI+PR +LG P ++ + E
Sbjct: 415 RLTAYHEAGHAVVAFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTRE 466
Score = 88 (36.0 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETL 549
A+HE+GHA+V + P +D + K TI+PR +LG P ++ + E +
Sbjct: 418 AYHEAGHAVVAFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTREKM 468
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 232 (86.7 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 48/89 (53%), Positives = 64/89 (71%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E VD+LK + + LG K+PKG LL+G PG GKTLLA+A+A EANVPF S++GS+F+EM
Sbjct: 171 IEIVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGEANVPFFSISGSDFVEM 230
Query: 61 IGGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA+RVR E H C +F+ EI
Sbjct: 231 FVGVGASRVRDMFEQGKKHAPCIIFVDEI 259
Score = 94 (38.1 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPID 416
R A+HE+GHA+V + P +D + K TI+PR +LG P ++ + +E++ + +
Sbjct: 415 RLTAYHEAGHAVVAFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTREKMLADLT 473
Query: 417 TSRSHRVLRKWV 428
+ R + +
Sbjct: 474 VAMGGRAAEELI 485
Score = 90 (36.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEE 496
R A+HE+GHA+V + P +D + K TI+PR +LG P ++ + E
Sbjct: 415 RLTAYHEAGHAVVAFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTRE 466
Score = 88 (36.0 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETL 549
A+HE+GHA+V + P +D + K TI+PR +LG P ++ + E +
Sbjct: 418 AYHEAGHAVVAFHNPASDPIHKATIIPR-GRSLGLVMRLPETDRVSHTREKM 468
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 233 (87.1 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 44/69 (63%), Positives = 55/69 (79%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E D+L+ P YQ LGAK+PKG LL GPPG GKTLLA+AVA EA VPF +++GS+F+EM
Sbjct: 177 EIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMF 236
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 237 VGVGASRVR 245
Score = 95 (38.5 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 487 SEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNK 545
SEQ+ K+ A+HE GH L W +P + + KVTI+ R G A P E K L +
Sbjct: 415 SEQE---KKITAYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTR 470
Query: 546 EETL 549
E +
Sbjct: 471 SEMI 474
Score = 92 (37.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPI 415
A+HE GH L W +P + + KVTI+ R G A P E K L + E+ + +
Sbjct: 423 AYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQL 477
Score = 91 (37.1 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 37/130 (28%), Positives = 53/130 (40%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV----AFHE 501
A+HE GH L W +P + + KVTI+ R G A P E K L + E+ F
Sbjct: 423 AYHEGGHTLAAWAMPDIEPIYKVTILARGRTG-GHAVAVPEEDKGLRTRSEMIAQLVFAM 481
Query: 502 SGHALVGWLL--PHTDALLKV---TIVPRTSLALGFAQYTPSEQKLYNKEETLDPKKEMT 556
G A + P T A+ + T + R S+ F + Y E DP T
Sbjct: 482 GGRAAEELVFREPTTGAVSDIEQATKIAR-SMVTEFGMSSKLGAVKYGSEHG-DPFLGRT 539
Query: 557 VNREQPPSHD 566
+ + SH+
Sbjct: 540 MGTQPDYSHE 549
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 218 (81.8 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 43/69 (62%), Positives = 53/69 (76%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++L PE + +LG K+PKG LL+GPPG GKTLLA+AVA EA VPF M+GSEF E+
Sbjct: 329 ELVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMSGSEFDEVY 388
Query: 62 GGLGAARVR 70
G+GA RVR
Sbjct: 389 VGVGAKRVR 397
Score = 107 (42.7 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEI--FSPIDTS 418
A+HE+GHALV + P + L K+TI+PR ++LG + P E + +K + S ID S
Sbjct: 572 AYHEAGHALVAYFSPSSMPLYKITIMPR-GMSLGSTHFLP-EMDMVSKNYVQYLSDIDVS 629
Query: 419 RSHRVLRKWV 428
+V + +
Sbjct: 630 MGGKVAEELI 639
Score = 100 (40.3 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAF 499
A+HE+GHALV + P + L K+TI+PR ++LG + P E + +K V +
Sbjct: 572 AYHEAGHALVAYFSPSSMPLYKITIMPR-GMSLGSTHFLP-EMDMVSKNYVQY 622
Score = 96 (38.9 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK 545
A+HE+GHALV + P + L K+TI+PR ++LG + P E + +K
Sbjct: 572 AYHEAGHALVAYFSPSSMPLYKITIMPR-GMSLGSTHFLP-EMDMVSK 617
Score = 44 (20.5 bits), Expect = 7.7e-14, Sum P(2) = 7.7e-14
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 161 KEKVLKIDAELRHKKELDLERQILLHE-ITKLKSE--LKNRELH--IVKMETQLRAYE-- 213
+++ I E RH+ EL L + ++ +E +TK + E L+ L +V + ++ E
Sbjct: 705 RQRATNILTERRHELEL-LTKALIKYETLTKEEMEKVLRGESLDRLVVPADAPMKLPEPI 763
Query: 214 SDKKLARKQLID-SVNREIAE 233
S L+ Q ++ S NR AE
Sbjct: 764 SATNLSPNQGVEESGNRASAE 784
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 236 (88.1 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 45/69 (65%), Positives = 57/69 (82%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK E +Q LGA++PKG LL+GPPG GKTLLAKA+A EA VPF S++GSEF+EM
Sbjct: 173 EVVEFLKSREKFQALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 232
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 233 VGVGASRVR 241
Score = 86 (35.3 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
KE A+HE+GH LV L+ D + K++IV R + LG + P+E +
Sbjct: 415 KEVTAYHETGHGLVLRLVQGADPVHKISIVAR-GMTLGHTRQLPNEDR 461
Score = 78 (32.5 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 404
A+HE+GH LV L+ D + K++IV R + LG + P+E +
Sbjct: 419 AYHETGHGLVLRLVQGADPVHKISIVAR-GMTLGHTRQLPNEDR 461
Score = 78 (32.5 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HE+GH LV L+ D + K++IV R + LG + P+E +
Sbjct: 419 AYHETGHGLVLRLVQGADPVHKISIVAR-GMTLGHTRQLPNEDR 461
Score = 37 (18.1 bits), Expect = 3.4e-20, Sum P(3) = 3.4e-20
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 224 IDSVNREIAETILLKNFAHQLI 245
I + + +A+T+ L+N A Q +
Sbjct: 340 IHAKGKPLADTVNLENLAKQTV 361
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 221 (82.9 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 42/69 (60%), Positives = 55/69 (79%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++L+ P +Q LG K+P G LL+GPPG GKTLLAKAVA EA VPF +++GS+F+EM
Sbjct: 170 ELVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMF 229
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 230 VGVGASRVR 238
Score = 98 (39.6 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 494 KEEVAFHESGHALVGW-LLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
K+ A+HE+GHA+VG +L H D + KVTI+PR ALG + P +
Sbjct: 412 KKLTAYHEAGHAIVGLHMLEH-DPVYKVTIIPR-GRALGVTMFLPEHDR 458
Score = 95 (38.5 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 361 AFHESGHALVGW-LLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 404
A+HE+GHA+VG +L H D + KVTI+PR ALG + P +
Sbjct: 416 AYHEAGHAIVGLHMLEH-DPVYKVTIIPR-GRALGVTMFLPEHDR 458
Score = 95 (38.5 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 447 AFHESGHALVGW-LLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HE+GHA+VG +L H D + KVTI+PR ALG + P +
Sbjct: 416 AYHEAGHAIVGLHMLEH-DPVYKVTIIPR-GRALGVTMFLPEHDR 458
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 216 (81.1 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 47/88 (53%), Positives = 57/88 (64%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK PE + NLG K+PKG LL+GPPG GKTLLA+AVA EA VPF G EF E++
Sbjct: 314 EVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLARAVAGEAKVPFFHAAGPEFDEVL 373
Query: 62 GGLGAARVR----TEVVFLHCRVFLHEI 85
G GA RVR C +F+ EI
Sbjct: 374 VGQGARRVRDLFKAAKARAPCVIFIDEI 401
Score = 103 (41.3 bits), Expect = 7.6e-20, Sum P(2) = 7.6e-20
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPIDTSR 419
A+HE GHA+V + + L KVTI+PR +LG Y P +++ + K ++ + +DT
Sbjct: 557 AYHEGGHAIVAFYTKESHPLHKVTIMPRGP-SLGHTAYIPEKERYHVTKAQLLAMMDTMM 615
Query: 420 SHRVLRKWVLSS 431
R + V +
Sbjct: 616 GGRAAEELVFGT 627
Score = 89 (36.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
A+HE GHA+V + + L KVTI+PR +LG Y P +++ +
Sbjct: 557 AYHEGGHAIVAFYTKESHPLHKVTIMPRGP-SLGHTAYIPEKERYH 601
Score = 89 (36.4 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 543
A+HE GHA+V + + L KVTI+PR +LG Y P +++ +
Sbjct: 557 AYHEGGHAIVAFYTKESHPLHKVTIMPRGP-SLGHTAYIPEKERYH 601
>TAIR|locus:2075581 [details] [associations]
symbol:ftsh7 "FTSH protease 7" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
GO:GO:0009535 EMBL:AL133292 GO:GO:0004176 HOGENOM:HOG000217276
KO:K03798 EMBL:AY099737 EMBL:BT000368 IPI:IPI00522102 PIR:T45642
RefSeq:NP_566889.1 UniGene:At.43767 ProteinModelPortal:Q9SD67
SMR:Q9SD67 MEROPS:M41.A04 PaxDb:Q9SD67 PRIDE:Q9SD67
EnsemblPlants:AT3G47060.1 GeneID:823859 KEGG:ath:AT3G47060
GeneFarm:2514 TAIR:At3g47060 InParanoid:Q9SD67 OMA:SNQVQKV
PhylomeDB:Q9SD67 ProtClustDB:CLSN2689036 Genevestigator:Q9SD67
Uniprot:Q9SD67
Length = 802
Score = 217 (81.4 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++L+ PE Y LGA+ P+G LL+G PG GKTLLAKAVA EA VPF+S + SEF+E+
Sbjct: 339 EIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELY 398
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 399 VGMGASRVR 407
Score = 91 (37.1 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 28/85 (32%), Positives = 42/85 (49%)
Query: 360 VAFHESGHALVGW----LLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK--EEIFS 413
VA HE+GHA+VG LL + K++I+PRT ALGF P+ + Y +E+
Sbjct: 587 VARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRYLLFIDELLG 646
Query: 414 PIDTSRSHRVLRKWVLSSLLTVNKF 438
+ T R + V S ++ F
Sbjct: 647 RLVTLLGGRAAEEVVYSGRISTGAF 671
Score = 90 (36.7 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 468 KVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHALVGW----LLPHTDALLKVTIV 523
K+ + ++ + + K K VA HE+GHA+VG LL + K++I+
Sbjct: 558 KIDFIQAVERSIAGIEKKSARLKGNEKAVVARHEAGHAVVGTAVANLLTGQPRVEKLSIL 617
Query: 524 PRTSLALGFAQYTPSEQKLY 543
PRT ALGF P+ + Y
Sbjct: 618 PRTGGALGFTYIPPTSEDRY 637
Score = 87 (35.7 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 446 VAFHESGHALVGW----LLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
VA HE+GHA+VG LL + K++I+PRT ALGF P+ + Y
Sbjct: 587 VARHEAGHAVVGTAVANLLTGQPRVEKLSILPRTGGALGFTYIPPTSEDRY 637
Score = 52 (23.4 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 161 KEKVLKIDAELRHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLAR 220
+E +L++ KKEL L + L I + + +L + E L A +K
Sbjct: 501 RESILRVHVS---KKELPLGDDVNLGSIASMTTGFTGADLANLVNEAALLAGRKNKTNVE 557
Query: 221 K-QLIDSVNREIA 232
K I +V R IA
Sbjct: 558 KIDFIQAVERSIA 570
Score = 39 (18.8 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 137 LGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
LG +L++ E EEL+K + + L + E K+EL L Q
Sbjct: 755 LGAQLEEKEKVEGEELQKWLSMVVAPEELAVFVE--GKQELLLPAQ 798
>GENEDB_PFALCIPARUM|PF14_0616 [details] [associations]
symbol:PF14_0616 "i-AAA protease, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 224 (83.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 47/88 (53%), Positives = 60/88 (68%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E +DYLK + + +GAK+PKG LL G PG GKTL+A+A+A EANVPFL +GSEF EM
Sbjct: 268 EIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEEMF 327
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA R+R + H C VF+ EI
Sbjct: 328 VGVGARRIRELFQAAKKHAPCIVFIDEI 355
Score = 87 (35.7 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 477 LALGFAQYTPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYT 536
+ +G + +P ++ K A+HE GH LV + +D + K TI+PR ++LG
Sbjct: 491 VVVGLQRKSPLNEE--EKNITAYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLGVTWKI 547
Query: 537 P-SE---QKLYNKEETLDPKKEMTVNREQPPSHDKKKRKCLTEISVTTMVLSSL 586
P S+ QK+ + + +D V+ E + C +++ T + SL
Sbjct: 548 PISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSL 601
Score = 86 (35.3 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK-EEIFSPID 416
A+HE GH LV + +D + K TI+PR ++LG P K K +++ S ID
Sbjct: 510 AYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLGVTWKIPISDKYSQKIKDVQSEID 565
Score = 79 (32.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK 494
A+HE GH LV + +D + K TI+PR ++LG P K K
Sbjct: 510 AYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLGVTWKIPISDKYSQK 556
>UNIPROTKB|Q8IKI9 [details] [associations]
symbol:PF14_0616 "ATP-dependent protease la, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
EMBL:AE014187 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 HSSP:Q9LCZ4 RefSeq:XP_001348790.1
ProteinModelPortal:Q8IKI9 SMR:Q8IKI9 PRIDE:Q8IKI9
EnsemblProtists:PF14_0616:mRNA GeneID:812198 KEGG:pfa:PF14_0616
EuPathDB:PlasmoDB:PF3D7_1464900 OMA:HMENVET ProtClustDB:CLSZ2434669
Uniprot:Q8IKI9
Length = 706
Score = 224 (83.9 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 47/88 (53%), Positives = 60/88 (68%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E +DYLK + + +GAK+PKG LL G PG GKTL+A+A+A EANVPFL +GSEF EM
Sbjct: 268 EIIDYLKNSDKFTKIGAKLPKGILLSGEPGTGKTLIARAIAGEANVPFLQASGSEFEEMF 327
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA R+R + H C VF+ EI
Sbjct: 328 VGVGARRIRELFQAAKKHAPCIVFIDEI 355
Score = 87 (35.7 bits), Expect = 4.0e-19, Sum P(2) = 4.0e-19
Identities = 29/114 (25%), Positives = 53/114 (46%)
Query: 477 LALGFAQYTPSEQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYT 536
+ +G + +P ++ K A+HE GH LV + +D + K TI+PR ++LG
Sbjct: 491 VVVGLQRKSPLNEE--EKNITAYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLGVTWKI 547
Query: 537 P-SE---QKLYNKEETLDPKKEMTVNREQPPSHDKKKRKCLTEISVTTMVLSSL 586
P S+ QK+ + + +D V+ E + C +++ T + SL
Sbjct: 548 PISDKYSQKIKDVQSEIDILMGGLVSEEIIFGKNNVTTGCSSDLQKATHIAQSL 601
Score = 86 (35.3 bits), Expect = 5.1e-19, Sum P(2) = 5.1e-19
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK-EEIFSPID 416
A+HE GH LV + +D + K TI+PR ++LG P K K +++ S ID
Sbjct: 510 AYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLGVTWKIPISDKYSQKIKDVQSEID 565
Score = 79 (32.9 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNK 494
A+HE GH LV + +D + K TI+PR ++LG P K K
Sbjct: 510 AYHEGGHTLVNFYTKGSDPVHKATIMPR-GMSLGVTWKIPISDKYSQK 556
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 222 (83.2 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 44/69 (63%), Positives = 51/69 (73%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VDYLK PE Y LG ++PKG LL+GPPG GKTLLA+A+A EA VPF GSEF E++
Sbjct: 262 EIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVL 321
Query: 62 GGLGAARVR 70
G GA RVR
Sbjct: 322 VGQGARRVR 330
Score = 89 (36.4 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 51/218 (23%), Positives = 88/218 (40%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY-NKEEIFSPID 416
R A+HE+GH LV L KVTI+PR +LG P + K ++ + +D
Sbjct: 504 RNTAYHEAGHTLVSLYTKDATPLHKVTIIPRGQ-SLGHTAMLPEKDSYQLTKAQMLATLD 562
Query: 417 TSRSHRVLRKWVLSS--LLT-----VNKFASLVCRQV-AFHESGHA-LVGWLLPHTD-AL 466
RV + + + T ++K L + V F S L + + AL
Sbjct: 563 VMMGGRVAEELIFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVGLRDFTAQDNESAL 622
Query: 467 LKVT-IVPRTSLALGFAQYTPSEQKLYNKEEVAFH--ESGHALVGWLLPHTDALLKVTIV 523
+KV+ + P+T+ + A+ Q+ Y + +V + H L+ L + L V
Sbjct: 623 VKVSDLAPQTAELID-AEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETL-SADEV 680
Query: 524 PRTSLALGFAQYTPSEQKLYNKEETLDPKKEMTVNREQ 561
R + TP+ K N+ + P + + E+
Sbjct: 681 KRVISGQKIKRPTPAAVKKSNETKRNQPSLVLHLFEEE 718
>TAIR|locus:2057386 [details] [associations]
symbol:ftsh4 "FTSH protease 4" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA;ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0004252 "serine-type endopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISS] [GO:0016020
"membrane" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0009536 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
GO:GO:0005743 GO:GO:0046872 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49
EMBL:AC004747 GO:GO:0004176 HOGENOM:HOG000217276 EMBL:AK220842
IPI:IPI00534293 PIR:T02610 RefSeq:NP_565616.1 UniGene:At.23415
ProteinModelPortal:O80983 SMR:O80983 STRING:O80983 MEROPS:M41.004
PaxDb:O80983 PRIDE:O80983 EnsemblPlants:AT2G26140.1 GeneID:817154
KEGG:ath:AT2G26140 GeneFarm:2508 TAIR:At2g26140 InParanoid:O80983
OMA:HTEGALP PhylomeDB:O80983 ProtClustDB:CLSN2688437
Genevestigator:O80983 Uniprot:O80983
Length = 717
Score = 217 (81.4 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 42/69 (60%), Positives = 52/69 (75%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V YL+ P+ + LG K+PKG LL+GPPG GKT+LA+A+A EA VPF S +GSEF EM
Sbjct: 241 EIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMF 300
Query: 62 GGLGAARVR 70
G+GA RVR
Sbjct: 301 VGVGARRVR 309
Score = 91 (37.1 bits), Expect = 9.6e-19, Sum P(2) = 9.6e-19
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 361 AFHESGHALVGWLLPHTDALL---KVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPID 416
AFHE GHALV HT+ L K TIVPR +ALG P + + +++++ + +D
Sbjct: 484 AFHEGGHALVAI---HTEGALPVHKATIVPR-GMALGMVSQLPDKDETSISRKQMLARLD 539
Query: 417 TSRSHRVLRKWV 428
RV + +
Sbjct: 540 VCMGGRVAEELI 551
Score = 89 (36.4 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 33/102 (32%), Positives = 46/102 (45%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALL---KVTIVPRTSLALGFAQYTPSEQKLYNKEETL 549
+++ AFHE GHALV HT+ L K TIVPR +ALG P +K+ET
Sbjct: 479 SRKLTAFHEGGHALVAI---HTEGALPVHKATIVPR-GMALGMVSQLP------DKDETS 528
Query: 550 DPKKEMTVNREQPPSHDKKKRKCLTEISVTTMVLSSLNRREK 591
+K+M + + E VT+ S L + K
Sbjct: 529 ISRKQMLARLDVCMGGRVAEELIFGESEVTSGASSDLEQATK 570
Score = 83 (34.3 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 25/57 (43%), Positives = 30/57 (52%)
Query: 447 AFHESGHALVGWLLPHTDALL---KVTIVPRTSLALGFAQYTPS--EQKLYNKEEVA 498
AFHE GHALV HT+ L K TIVPR +ALG P E + K+ +A
Sbjct: 484 AFHEGGHALVAI---HTEGALPVHKATIVPR-GMALGMVSQLPDKDETSISRKQMLA 536
>CGD|CAL0002950 [details] [associations]
symbol:YME1 species:5476 "Candida albicans" [GO:0031942
"i-AAA complex" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0001300 "chronological cell aging" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 CGD:CAL0002950 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.004
EMBL:AACQ01000068 EMBL:AACQ01000067 KO:K08955 RefSeq:XP_716504.1
RefSeq:XP_716560.1 ProteinModelPortal:Q5A458 SMR:Q5A458
STRING:Q5A458 GeneID:3641816 GeneID:3641839 KEGG:cal:CaO19.1252
KEGG:cal:CaO19.8836 Uniprot:Q5A458
Length = 687
Score = 214 (80.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 42/69 (60%), Positives = 50/69 (72%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P + LG K+PKG LL GPPG GKTLLA+A A EA VPF M+GSEF E+
Sbjct: 239 EIVDFLKDPSKFTGLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVPFFFMSGSEFDELY 298
Query: 62 GGLGAARVR 70
G+GA R+R
Sbjct: 299 VGVGAKRIR 307
Score = 91 (37.1 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 21/69 (30%), Positives = 35/69 (50%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPIDTSR 419
A+HE+GHA++ L K TI+PR ALG P K+ +K+E F+ +D
Sbjct: 482 AYHEAGHAIMAMFSKGATPLYKATILPR-GRALGITFQLPEMDKVDMSKQECFARLDVCM 540
Query: 420 SHRVLRKWV 428
++ + +
Sbjct: 541 GGKIAEEMI 549
Score = 82 (33.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 29/104 (27%), Positives = 45/104 (43%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEET---LDPKK 553
A+HE+GHA++ L K TI+PR ALG P K+ +K+E LD
Sbjct: 482 AYHEAGHAIMAMFSKGATPLYKATILPR-GRALGITFQLPEMDKVDMSKQECFARLDVCM 540
Query: 554 EMTVNREQPPSHDKKKRKCLTEISVTTMVLSSL-NRREKEDRIG 596
+ E + C +++S T V ++ D+IG
Sbjct: 541 GGKIAEEMINGKENVTSGCASDLSNATSVARAMVTSYGMSDKIG 584
Score = 76 (31.8 bits), Expect = 6.5e-17, Sum P(2) = 6.5e-17
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEE 496
A+HE+GHA++ L K TI+PR ALG P K+ +K+E
Sbjct: 482 AYHEAGHAIMAMFSKGATPLYKATILPR-GRALGITFQLPEMDKVDMSKQE 531
>DICTYBASE|DDB_G0267492 [details] [associations]
symbol:DDB_G0267492 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0267492 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
EMBL:AAFI02000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 RefSeq:XP_647076.1
ProteinModelPortal:Q55GV8 SMR:Q55GV8 MEROPS:M41.A18
EnsemblProtists:DDB0189322 GeneID:8615880 KEGG:ddi:DDB_G0267492
OMA:RINENNQ Uniprot:Q55GV8
Length = 720
Score = 202 (76.2 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 45/88 (51%), Positives = 58/88 (65%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
+ VD+L+ PE Y +PKG LL+GPPG GKTLLAK++A EA V F+++NGSEF E
Sbjct: 178 DLVDFLRNPEKYYRRNIVMPKGILLVGPPGTGKTLLAKSLAGEARVSFITINGSEFEEAF 237
Query: 62 GGLGAARVRT--EVVFLH--CRVFLHEI 85
G+GA RVR E + C VF+ EI
Sbjct: 238 VGVGAKRVRELFEAARKNSPCIVFIDEI 265
Score = 108 (43.1 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 345 SLLTVNKFASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 404
SLL ++ A +C AFHE+GHALV + P + K TI+PR ALG E+
Sbjct: 409 SLLMSDE-ARKIC---AFHEAGHALVAIMTPGARTVHKATIMPRGD-ALGLVSMLEKEET 463
Query: 405 LYNKEEIFSPIDTSRSHRVLRKWVL 429
K+++ + +D + R + +L
Sbjct: 464 FVTKKQLIAQMDVAMGGRAAEELIL 488
Score = 95 (38.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 402 EQKLYNKEEI-FSPIDTSRSHRVLRKWVLSSLLTVNKFASLVCRQVAFHESGHALVGWLL 460
E +N EI ++ ++ + ++ K SLL ++ A +C AFHE+GHALV +
Sbjct: 380 ETTKHNLPEITMEQLENAKENLMMGK-ERHSLLMSDE-ARKIC---AFHEAGHALVAIMT 434
Query: 461 PHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEV 497
P + K TI+PR ALG E+ K+++
Sbjct: 435 PGARTVHKATIMPRGD-ALGLVSMLEKEETFVTKKQL 470
Score = 90 (36.7 bits), Expect = 1.7e-16, Sum P(3) = 1.7e-16
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 498 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEETL 549
AFHE+GHALV + P + K TI+PR ALG E+ K++ +
Sbjct: 421 AFHEAGHALVAIMTPGARTVHKATIMPRGD-ALGLVSMLEKEETFVTKKQLI 471
Score = 54 (24.1 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 20/86 (23%), Positives = 46/86 (53%)
Query: 87 IFDLETK-IIENIFDLETKII--LSSFMMIVLKLNLEKEVMLRKKLEEEYSIE--LGRKL 141
+ D E K ++++ + T+++ S ++ LE E + ++++ + + +K
Sbjct: 539 LVDSEVKSLLDSSYIRATQLLKKYSKEHHLIANALLEYETLSLDEIKDIIASKSLANKKN 598
Query: 142 QDMEIKHAEELKKQ-EQCLRKEKVLK 166
++ IK EELKK+ ++ +K+KV K
Sbjct: 599 REQLIKEREELKKKRDEDFKKQKVFK 624
Score = 49 (22.3 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 23/89 (25%), Positives = 46/89 (51%)
Query: 98 IFDLETKIIL-SSFM---MIVLKLNLEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEELK 153
+ D E K +L SS++ ++ K + E ++ LE E ++ L +++D+ + K
Sbjct: 539 LVDSEVKSLLDSSYIRATQLLKKYSKEHHLIANALLEYE-TLSLD-EIKDIIASKSLANK 596
Query: 154 KQEQCLRKEKVLKIDAELRHKKELDLERQ 182
K + L KE+ EL+ K++ D ++Q
Sbjct: 597 KNREQLIKER-----EELKKKRDEDFKKQ 620
Score = 38 (18.4 bits), Expect = 2.4e-18, Sum P(3) = 2.4e-18
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 290 HNIPQEIYDDILNLKLNL 307
HN+P+ + + N K NL
Sbjct: 384 HNLPEITMEQLENAKENL 401
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 220 (82.5 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 42/69 (60%), Positives = 53/69 (76%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+L+ P ++ LG K+P+G LL GPPG GKT+LA+AVA EANVPF M+GS+F EM
Sbjct: 281 EIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMY 340
Query: 62 GGLGAARVR 70
G+GA RVR
Sbjct: 341 VGVGAKRVR 349
Score = 82 (33.9 bits), Expect = 3.7e-18, Sum P(2) = 3.7e-18
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIFSPIDTSR 419
A+HE GHALV + K TI+PR S +LG P K + +EE + +D +
Sbjct: 528 AYHEGGHALVALFTKNAMRPYKATIMPRGS-SLGMTISLPDMDKDSWTREEYLAMLDVTM 586
Query: 420 SHR 422
R
Sbjct: 587 GGR 589
Score = 81 (33.6 bits), Expect = 4.7e-18, Sum P(2) = 4.7e-18
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEETL 549
NK A+HE GHALV + K TI+PR S +LG P K + +EE L
Sbjct: 523 NKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGS-SLGMTISLPDMDKDSWTREEYL 579
Score = 77 (32.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 35/133 (26%), Positives = 61/133 (45%)
Query: 373 LLPHTDALLKVTIVPRTSLALGFAQYTPSE-QKLYNKEEIFSP--IDTSRSHRVLRKWVL 429
LL HT + V + +A G + + ++ L N+ +++ + T+ S R L +W
Sbjct: 447 LLQHTRHVPLGKDVDLSIIARGTSGFAGADLANLINQAAVYASKNLSTAVSMRDL-EWSK 505
Query: 430 SSLLT-VNKFASLVCRQ----VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQY 484
+L + ++ + + A+HE GHALV + K TI+PR S +LG
Sbjct: 506 DRILMGAERKSAFITPENKLMTAYHEGGHALVALFTKNAMRPYKATIMPRGS-SLGMTIS 564
Query: 485 TPSEQK-LYNKEE 496
P K + +EE
Sbjct: 565 LPDMDKDSWTREE 577
>UNIPROTKB|A6QR12 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008283 "cell proliferation" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005 HOGENOM:HOG000217276
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 CTD:10730
HOVERGEN:HBG057127 OMA:HTSHVSA OrthoDB:EOG4KH2TK EMBL:DAAA02035354
EMBL:BC150071 IPI:IPI00866889 RefSeq:NP_001095320.1 UniGene:Bt.1786
SMR:A6QR12 STRING:A6QR12 Ensembl:ENSBTAT00000021868 GeneID:505118
KEGG:bta:505118 InParanoid:A6QR12 NextBio:20866987 Uniprot:A6QR12
Length = 717
Score = 215 (80.7 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 295 EVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 354
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 355 VGVGASRIR 363
Score = 86 (35.3 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 21/73 (28%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNETRAQLLAQMDVS 596
Query: 419 RSHRVLRKWVLSS 431
RV + + S
Sbjct: 597 MGGRVAEELIFGS 609
Score = 78 (32.5 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 534 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
Score = 71 (30.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
>TAIR|locus:2154568 [details] [associations]
symbol:ftsh9 "FTSH protease 9" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 EMBL:AB016885
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798
ProtClustDB:CLSN2689036 EMBL:AY059856 IPI:IPI00541670
RefSeq:NP_568892.1 UniGene:At.7754 ProteinModelPortal:Q9FIM2
SMR:Q9FIM2 STRING:Q9FIM2 MEROPS:M41.A03 PaxDb:Q9FIM2 PRIDE:Q9FIM2
EnsemblPlants:AT5G58870.1 GeneID:836004 KEGG:ath:AT5G58870
GeneFarm:2516 TAIR:At5g58870 InParanoid:Q9FIM2 OMA:SSKRGEN
PhylomeDB:Q9FIM2 Genevestigator:Q9FIM2 Uniprot:Q9FIM2
Length = 806
Score = 215 (80.7 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 41/69 (59%), Positives = 55/69 (79%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ Y LGA+ P+G LL+G PG GKTLLAKAVA E++VPF+S + SEF+E+
Sbjct: 343 EIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELY 402
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 403 VGMGASRVR 411
Score = 86 (35.3 bits), Expect = 7.7e-18, Sum P(2) = 7.7e-18
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 494 KEEVAFHESGHALVGW----LLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 543
K VA HE+GHA+VG LL + K++I+PR+ ALGF P+ + Y
Sbjct: 588 KAVVARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHEDRY 641
Score = 84 (34.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 360 VAFHESGHALVGW----LLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 406
VA HE+GHA+VG LL + K++I+PR+ ALGF P+ + Y
Sbjct: 591 VARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHEDRY 641
Score = 84 (34.6 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 446 VAFHESGHALVGW----LLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLY 492
VA HE+GHA+VG LL + K++I+PR+ ALGF P+ + Y
Sbjct: 591 VARHEAGHAVVGTAVASLLSGQSRVEKLSILPRSGGALGFTYIPPTHEDRY 641
Score = 40 (19.1 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 137 LGRKLQDMEIKHAEELKK 154
LG +L+D E EEL+K
Sbjct: 759 LGAQLEDEEKVEGEELQK 776
>TAIR|locus:2163736 [details] [associations]
symbol:FTSH11 "FTSH protease 11" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=TAS] [GO:0009408 "response to heat" evidence=IMP]
[GO:0009644 "response to high light intensity" evidence=IMP]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0019761
"glucosinolate biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0009536
"plastid" evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005743 GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0004222 GO:GO:0009408 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176
EMBL:AB025622 HOGENOM:HOG000217276 GO:GO:0010304 EMBL:AY091086
EMBL:AY123027 IPI:IPI00537766 RefSeq:NP_568787.1 UniGene:At.7145
ProteinModelPortal:Q9FGM0 SMR:Q9FGM0 MEROPS:M41.018 PaxDb:Q9FGM0
PRIDE:Q9FGM0 EnsemblPlants:AT5G53170.1 GeneID:835398
KEGG:ath:AT5G53170 GeneFarm:4747 TAIR:At5g53170 InParanoid:Q9FGM0
OMA:DIMPEKN PhylomeDB:Q9FGM0 ProtClustDB:CLSN2690002
Genevestigator:Q9FGM0 Uniprot:Q9FGM0
Length = 806
Score = 209 (78.6 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 43/70 (61%), Positives = 49/70 (70%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V+YLK P + LG K+PKG LL G PG GKTLLAKA+A EA VPF GSEF EM
Sbjct: 376 EVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMF 435
Query: 62 GGLGAARVRT 71
G+GA RVR+
Sbjct: 436 VGVGARRVRS 445
Score = 92 (37.4 bits), Expect = 8.3e-18, Sum P(2) = 8.3e-18
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPS-EQKLYNKEEIFSPIDTSR 419
A+HESGHA+V + K TI+PR S ALG PS ++ +K ++ + +D
Sbjct: 618 AYHESGHAIVALNTKGAHPIHKATIMPRGS-ALGMVTQLPSNDETSVSKRQLLARLDVCM 676
Query: 420 SHRVLRKWV 428
RV + +
Sbjct: 677 GGRVAEELI 685
Score = 84 (34.6 bits), Expect = 5.6e-17, Sum P(2) = 5.6e-17
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPS-EQKLYNKEETL 549
+K+ A+HESGHA+V + K TI+PR S ALG PS ++ +K + L
Sbjct: 613 SKKLTAYHESGHAIVALNTKGAHPIHKATIMPRGS-ALGMVTQLPSNDETSVSKRQLL 669
Score = 79 (32.9 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA+V + K TI+PR S ALG PS +
Sbjct: 618 AYHESGHAIVALNTKGAHPIHKATIMPRGS-ALGMVTQLPSNDE 660
Score = 40 (19.1 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 174 KKELDLERQILLHEI-TKLKSELKNRELHIVKMETQLRAYES 214
+ +D E LL E ++KS LK E + + L YE+
Sbjct: 733 QSRIDAEVVKLLREAYERVKSLLKRHEKQLHTLANALLEYET 774
>UNIPROTKB|J9NRR9 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 GeneTree:ENSGT00550000074836 EMBL:AAEX03001169
Ensembl:ENSCAFT00000045217 Uniprot:J9NRR9
Length = 694
Score = 215 (80.7 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 295 EVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 354
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 355 VGVGASRIR 363
Score = 83 (34.3 bits), Expect = 9.7e-18, Sum P(2) = 9.7e-18
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNETRAQLLAQMDVS 596
Query: 419 RSHRVLRKWVLSS 431
RV + + +
Sbjct: 597 MGGRVAEELIFGT 609
Score = 78 (32.5 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 534 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
Score = 71 (30.1 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
>MGI|MGI:1351651 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006515
"misfolded or incompletely synthesized protein catabolic process"
evidence=ISO] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1351651 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 GeneTree:ENSGT00550000074836 KO:K08955
CTD:10730 HOVERGEN:HBG057127 OMA:HTSHVSA EMBL:AF090430
EMBL:AY136286 EMBL:AY136287 EMBL:AK079175 EMBL:BC007128
IPI:IPI00136555 RefSeq:NP_038799.1 UniGene:Mm.23335
ProteinModelPortal:O88967 SMR:O88967 STRING:O88967
PhosphoSite:O88967 PaxDb:O88967 PRIDE:O88967
Ensembl:ENSMUST00000028117 GeneID:27377 KEGG:mmu:27377
InParanoid:O88967 OrthoDB:EOG4KH2TK NextBio:305300 Bgee:O88967
CleanEx:MM_YME1L1 Genevestigator:O88967
GermOnline:ENSMUSG00000026775 Uniprot:O88967
Length = 715
Score = 215 (80.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 295 EVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 354
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 355 VGVGASRIR 363
Score = 83 (34.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNETRAQLLAQMDVS 596
Query: 419 RSHRVLRKWVLSS 431
RV + + +
Sbjct: 597 MGGRVAEELIFGT 609
Score = 78 (32.5 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 534 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
Score = 71 (30.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
>RGD|620764 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO;ISS]
[GO:0007005 "mitochondrion organization" evidence=ISO;ISS]
[GO:0008283 "cell proliferation" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 RGD:620764 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0004222 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
HOGENOM:HOG000217276 MEROPS:M41.A20 HOVERGEN:HBG057127
OrthoDB:EOG4KH2TK EMBL:AF151784 IPI:IPI00206065 UniGene:Rn.8153
ProteinModelPortal:Q925S8 SMR:Q925S8 MINT:MINT-4611841
STRING:Q925S8 PRIDE:Q925S8 UCSC:RGD:620764 InParanoid:Q925S8
Genevestigator:Q925S8 GermOnline:ENSRNOG00000017100 Uniprot:Q925S8
Length = 715
Score = 215 (80.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 295 EVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 354
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 355 VGVGASRIR 363
Score = 83 (34.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNEIRAQLLAQMDVS 596
Query: 419 RSHRVLRKWVLSS 431
RV + + +
Sbjct: 597 MGGRVAEELIFGT 609
Score = 78 (32.5 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 534 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
Score = 71 (30.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
>UNIPROTKB|G3V886 [details] [associations]
symbol:Yme1l1 "YME1-like 1 (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382 RGD:620764
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 KO:K08955 MEROPS:M41.A20 OMA:HTSHVSA
UniGene:Rn.8153 EMBL:CH474100 RefSeq:XP_003751780.1
Ensembl:ENSRNOT00000023395 GeneID:100910779 KEGG:rno:100910779
Uniprot:G3V886
Length = 715
Score = 215 (80.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 295 EVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 354
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 355 VGVGASRIR 363
Score = 83 (34.3 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNETRAQLLAQMDVS 596
Query: 419 RSHRVLRKWVLSS 431
RV + + +
Sbjct: 597 MGGRVAEELIFGT 609
Score = 78 (32.5 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 534 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
Score = 71 (30.1 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 539 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 581
>UNIPROTKB|F1PRV6 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AAEX03001169
Ensembl:ENSCAFT00000007090 Uniprot:F1PRV6
Length = 748
Score = 215 (80.7 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 329 EVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 388
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 389 VGVGASRIR 397
Score = 83 (34.3 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 573 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNETRAQLLAQMDVS 630
Query: 419 RSHRVLRKWVLSS 431
RV + + +
Sbjct: 631 MGGRVAEELIFGT 643
Score = 78 (32.5 bits), Expect = 4.1e-17, Sum P(2) = 4.1e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 568 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 615
Score = 71 (30.1 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 573 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 615
>UNIPROTKB|F1RVK1 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008283 "cell proliferation" evidence=IEA] [GO:0007005
"mitochondrion organization" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005743
GO:GO:0008283 GO:GO:0004222 GO:GO:0006515 GO:GO:0017111
TIGRFAMs:TIGR01241 GO:GO:0007005 GeneTree:ENSGT00550000074836
OMA:HTSHVSA EMBL:FP016148 Ensembl:ENSSSCT00000012110 Uniprot:F1RVK1
Length = 768
Score = 215 (80.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 348 EVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 407
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 408 VGVGASRIR 416
Score = 83 (34.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 592 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNETRAQLLAQMDVS 649
Query: 419 RSHRVLRKWVLSS 431
RV + + +
Sbjct: 650 MGGRVAEELIFGT 662
Score = 78 (32.5 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 587 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 634
Score = 71 (30.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 592 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 634
>UNIPROTKB|Q96TA2 [details] [associations]
symbol:YME1L1 "ATP-dependent zinc metalloprotease YME1L1"
species:9606 "Homo sapiens" [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0007005 "mitochondrion organization"
evidence=IMP] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=IMP] [GO:0008283 "cell
proliferation" evidence=IMP] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0016020 GO:GO:0005743
GO:GO:0046872 GO:GO:0008283 GO:GO:0006508 GO:GO:0004222
EMBL:CH471072 EMBL:AL160291 GO:GO:0030163 GO:GO:0006515
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
EMBL:AL162272 HOGENOM:HOG000217276 UniGene:Hs.74647 KO:K08955
EMBL:AF151782 EMBL:AJ132637 EMBL:AY358484 EMBL:AK297973
EMBL:BC023507 EMBL:BC024032 IPI:IPI00045946 IPI:IPI00099529
RefSeq:NP_001240795.1 RefSeq:NP_055078.1 RefSeq:NP_647473.1
UniGene:Hs.499145 ProteinModelPortal:Q96TA2 SMR:Q96TA2
IntAct:Q96TA2 STRING:Q96TA2 MEROPS:M41.A20 PhosphoSite:Q96TA2
DMDM:46397258 PaxDb:Q96TA2 PRIDE:Q96TA2 Ensembl:ENST00000326799
Ensembl:ENST00000375972 Ensembl:ENST00000376016 GeneID:10730
KEGG:hsa:10730 UCSC:uc001iti.3 UCSC:uc001itj.3 CTD:10730
GeneCards:GC10M027439 H-InvDB:HIX0127242 HGNC:HGNC:12843 MIM:607472
neXtProt:NX_Q96TA2 PharmGKB:PA37434 HOVERGEN:HBG057127
InParanoid:Q96TA2 OMA:HTSHVSA PhylomeDB:Q96TA2 ChiTaRS:YME1L1
GenomeRNAi:10730 NextBio:40734 ArrayExpress:Q96TA2 Bgee:Q96TA2
CleanEx:HS_YME1L1 Genevestigator:Q96TA2 GermOnline:ENSG00000136758
Uniprot:Q96TA2
Length = 773
Score = 215 (80.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 42/69 (60%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 353 EVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 412
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 413 VGVGASRIR 421
Score = 83 (34.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN--KEEIFSPIDTS 418
A+HESGHA++ + + K TI+PR LG P + +N + ++ + +D S
Sbjct: 597 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR-WNETRAQLLAQMDVS 654
Query: 419 RSHRVLRKWVLSS 431
RV + + +
Sbjct: 655 MGGRVAEELIFGT 667
Score = 78 (32.5 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+PR LG P +
Sbjct: 592 NKTITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 639
Score = 71 (30.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 597 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSLLPENDR 639
>ZFIN|ZDB-GENE-070410-25 [details] [associations]
symbol:yme1l1b "YME1-like 1b" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-070410-25 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 KO:K08955
MEROPS:M41.A20 HOVERGEN:HBG057127 EMBL:BC139529 IPI:IPI00614293
RefSeq:NP_001082983.1 UniGene:Dr.148676 ProteinModelPortal:A4QNU8
SMR:A4QNU8 STRING:A4QNU8 GeneID:557907 KEGG:dre:557907 CTD:557907
InParanoid:A4QNU8 NextBio:20882221 Uniprot:A4QNU8
Length = 722
Score = 212 (79.7 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 41/69 (59%), Positives = 54/69 (78%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++L+ P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 302 EVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 361
Query: 62 GGLGAARVR 70
G+GA+R+R
Sbjct: 362 VGVGASRIR 370
Score = 84 (34.6 bits), Expect = 1.9e-17, Sum P(2) = 1.9e-17
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NKE A+HESGHA++ + + K TI+PR LG P +
Sbjct: 541 NKEITAYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSMLPENDR 588
Score = 82 (33.9 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN-KEEIFSPIDTSR 419
A+HESGHA++ + + K TI+PR LG P + + ++ + +D S
Sbjct: 546 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSMLPENDRWSETRAQLLAQMDVSM 604
Query: 420 SHRVLRKWVLSS 431
RV + + +
Sbjct: 605 GGRVAEELIFGN 616
Score = 71 (30.1 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+PR LG P +
Sbjct: 546 AYHESGHAIIAYYTKDAMPINKATIMPRGP-TLGHVSMLPENDR 588
>ZFIN|ZDB-GENE-091113-41 [details] [associations]
symbol:yme1l1a "YME1-like 1a" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-091113-41 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:CU138525 IPI:IPI00962165
Ensembl:ENSDART00000110185 Uniprot:E7EZJ5
Length = 729
Score = 210 (79.0 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 44/88 (50%), Positives = 61/88 (69%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
+ V++L+ P+ + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 309 DVVEFLRNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 368
Query: 62 GGLGAARVRT---EV-VFLHCRVFLHEI 85
G+GA+R+R E C +F+ E+
Sbjct: 369 VGVGASRIRNLFKEAKASAPCVIFIDEL 396
Score = 85 (35.0 bits), Expect = 2.5e-17, Sum P(2) = 2.5e-17
Identities = 21/72 (29%), Positives = 35/72 (48%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN-KEEIFSPIDTSR 419
A+HESGHA+V + + K TI+PR +LG P + + ++ + +D S
Sbjct: 553 AYHESGHAIVAYYTKDAMPINKATIMPRGP-SLGHVSLLPENDRWSETRAQLLAQMDVSM 611
Query: 420 SHRVLRKWVLSS 431
RV + V +
Sbjct: 612 GGRVAEELVFGN 623
Score = 80 (33.2 bits), Expect = 8.4e-17, Sum P(2) = 8.4e-17
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA+V + + K TI+PR +LG P +
Sbjct: 548 NKTITAYHESGHAIVAYYTKDAMPINKATIMPRGP-SLGHVSLLPENDR 595
Score = 73 (30.8 bits), Expect = 4.5e-16, Sum P(2) = 4.5e-16
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA+V + + K TI+PR +LG P +
Sbjct: 553 AYHESGHAIVAYYTKDAMPINKATIMPRGP-SLGHVSLLPENDR 595
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 212 (79.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 42/69 (60%), Positives = 51/69 (73%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+LK P Y++LG K+PKG LL GPPG GKTLLA+A A EA V F M+GSEF E+
Sbjct: 295 EIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVY 354
Query: 62 GGLGAARVR 70
G+GA R+R
Sbjct: 355 VGVGAKRIR 363
Score = 79 (32.9 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 21/72 (29%), Positives = 33/72 (45%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFSPID 416
+ AFHE+GHA++ L K TI+PR ALG P K+ K E + +D
Sbjct: 535 KATAFHEAGHAIMAKYTNGATPLYKATILPR-GRALGITFQLPEMDKVDITKRECQARLD 593
Query: 417 TSRSHRVLRKWV 428
++ + +
Sbjct: 594 VCMGGKIAEELI 605
Score = 76 (31.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 34/125 (27%), Positives = 50/125 (40%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEET---L 549
++ AFHE+GHA++ L K TI+PR ALG P K+ K E L
Sbjct: 534 RKATAFHEAGHAIMAKYTNGATPLYKATILPR-GRALGITFQLPEMDKVDITKRECQARL 592
Query: 550 DPKKEMTVNREQPPSHDKKKRKCLTEI-SVTTMVLSSLNRREKEDRIGESQPFRERTLSH 608
D + E D C +++ S T + + + D +G E S
Sbjct: 593 DVCMGGKIAEELIYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVN-LSENWESW 651
Query: 609 QDKIR 613
+KIR
Sbjct: 652 SNKIR 656
Score = 74 (31.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL 491
+ AFHE+GHA++ L K TI+PR ALG P K+
Sbjct: 535 KATAFHEAGHAIMAKYTNGATPLYKATILPR-GRALGITFQLPEMDKV 581
>WB|WBGene00022222 [details] [associations]
symbol:Y73B3A.21 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006898 GO:GO:0006508 GO:GO:0004222 eggNOG:COG0465
GeneTree:ENSGT00530000063070 EMBL:FO081721 RefSeq:NP_508082.2
ProteinModelPortal:Q95XE1 SMR:Q95XE1 STRING:Q95XE1 PaxDb:Q95XE1
EnsemblMetazoa:Y73B3A.21 GeneID:190639 KEGG:cel:CELE_Y73B3A.21
UCSC:Y73B3A.21 CTD:190639 WormBase:Y73B3A.21 OMA:GEAYERT
NextBio:946466 Uniprot:Q95XE1
Length = 242
Score = 216 (81.1 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 40/58 (68%), Positives = 50/58 (86%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEETLD 550
+E VA+HE+GHALVGW+L HTDALLKVTI+P+TS ALGFAQY+P + K LY+K+E D
Sbjct: 47 REVVAYHEAGHALVGWMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYSKDELFD 104
Score = 214 (80.4 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 39/54 (72%), Positives = 49/54 (90%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEIF 412
VA+HE+GHALVGW+L HTDALLKVTI+P+TS ALGFAQY+P + K LY+K+E+F
Sbjct: 50 VAYHEAGHALVGWMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYSKDELF 103
Score = 207 (77.9 bits), Expect = 9.2e-16, P = 9.2e-16
Identities = 38/53 (71%), Positives = 48/53 (90%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK-LYNKEEV 497
VA+HE+GHALVGW+L HTDALLKVTI+P+TS ALGFAQY+P + K LY+K+E+
Sbjct: 50 VAYHEAGHALVGWMLEHTDALLKVTIIPQTSAALGFAQYSPRDDKHLYSKDEL 102
>UNIPROTKB|F1NTK8 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016020 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01241
GeneTree:ENSGT00550000074836 EMBL:AADN02000548 IPI:IPI00601077
Ensembl:ENSGALT00000012112 Uniprot:F1NTK8
Length = 712
Score = 214 (80.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 292 EVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 351
Query: 62 GGLGAARVRT 71
G+GA+R+R+
Sbjct: 352 VGVGASRIRS 361
Score = 72 (30.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+ R + LG P +
Sbjct: 531 NKTITAYHESGHAIIAYYTKDAMPINKATIMTRGT-TLGHVSLLPENDR 578
Score = 71 (30.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN-KEEIFSPIDTSR 419
A+HESGHA++ + + K TI+ R + LG P + + ++ + +D
Sbjct: 536 AYHESGHAIIAYYTKDAMPINKATIMTRGT-TLGHVSLLPENDRWSETRSQLLAQMDVCM 594
Query: 420 SHRVLRKWVLSS 431
R + + S
Sbjct: 595 GGRAAEELIFGS 606
Score = 65 (27.9 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+ R + LG P +
Sbjct: 536 AYHESGHAIIAYYTKDAMPINKATIMTRGT-TLGHVSLLPENDR 578
>UNIPROTKB|F1P519 [details] [associations]
symbol:YME1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006515 "misfolded
or incompletely synthesized protein catabolic process"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005743 GO:GO:0008283 GO:GO:0004222
GO:GO:0006515 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0007005
GeneTree:ENSGT00550000074836 OMA:HTSHVSA EMBL:AADN02000548
IPI:IPI00822340 Ensembl:ENSGALT00000038444 Uniprot:F1P519
Length = 717
Score = 214 (80.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 42/70 (60%), Positives = 54/70 (77%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V++LK P + LG K+PKG LL+GPPG GKTLLA+AVA EA+VPF +GSEF EM
Sbjct: 297 EVVEFLKNPHKFTVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMF 356
Query: 62 GGLGAARVRT 71
G+GA+R+R+
Sbjct: 357 VGVGASRIRS 366
Score = 72 (30.4 bits), Expect = 1.9e-16, Sum P(2) = 1.9e-16
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 493 NKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
NK A+HESGHA++ + + K TI+ R + LG P +
Sbjct: 536 NKTITAYHESGHAIIAYYTKDAMPINKATIMTRGT-TLGHVSLLPENDR 583
Score = 71 (30.1 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 361 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYN-KEEIFSPIDTSR 419
A+HESGHA++ + + K TI+ R + LG P + + ++ + +D
Sbjct: 541 AYHESGHAIIAYYTKDAMPINKATIMTRGT-TLGHVSLLPENDRWSETRSQLLAQMDVCM 599
Query: 420 SHRVLRKWVLSS 431
R + + S
Sbjct: 600 GGRAAEELIFGS 611
Score = 65 (27.9 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 447 AFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 490
A+HESGHA++ + + K TI+ R + LG P +
Sbjct: 541 AYHESGHAIIAYYTKDAMPINKATIMTRGT-TLGHVSLLPENDR 583
>UNIPROTKB|H3BTY6 [details] [associations]
symbol:SPG7 "Paraplegin" species:9606 "Homo sapiens"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] InterPro:IPR000642 Pfam:PF01434 GO:GO:0005524
GO:GO:0006508 GO:GO:0004222 EMBL:AC092123 HGNC:HGNC:11237
ChiTaRS:SPG7 Ensembl:ENST00000561911 Bgee:H3BTY6 Uniprot:H3BTY6
Length = 210
Score = 205 (77.2 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 39/69 (56%), Positives = 52/69 (75%)
Query: 485 TPSEQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQK 541
T + K+ +KEE VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q
Sbjct: 71 TAKKSKILSKEEQKVVAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQH 130
Query: 542 LYNKEETLD 550
L+ KE+ +
Sbjct: 131 LFTKEQLFE 139
Score = 198 (74.8 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 35/53 (66%), Positives = 45/53 (84%)
Query: 360 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEIF 412
VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++F
Sbjct: 86 VAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQLF 138
Score = 193 (73.0 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 38/63 (60%), Positives = 48/63 (76%)
Query: 446 VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESGHA 505
VAFHESGHALVGW+L HT+A++KV+I PRT+ ALGFAQ P +Q L+ KE++ F A
Sbjct: 86 VAFHESGHALVGWMLEHTEAVMKVSITPRTNAALGFAQMLPRDQHLFTKEQL-FERMCMA 144
Query: 506 LVG 508
L G
Sbjct: 145 LGG 147
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 193 (73.0 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 40/69 (57%), Positives = 47/69 (68%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VDYL P Y ++GAK+PKG LL G PG GKTLLA+A+A EA V FL GS F E
Sbjct: 314 EIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIAGEAGVSFLYTTGSSFDEKY 373
Query: 62 GGLGAARVR 70
G+G+ RVR
Sbjct: 374 VGVGSRRVR 382
Score = 84 (34.6 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 20/57 (35%), Positives = 30/57 (52%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEIFS 413
R A+HE+GHALV + D + K TIV R ALG P + Y ++++ +
Sbjct: 551 RNTAYHEAGHALVAAMTEAADPIHKATIVQRGQ-ALGMVSQLPEMDHVQYTRKQMMA 606
Score = 83 (34.3 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEEV 497
R A+HE+GHALV + D + K TIV R ALG P + Y ++++
Sbjct: 551 RNTAYHEAGHALVAAMTEAADPIHKATIVQRGQ-ALGMVSQLPEMDHVQYTRKQM 604
Score = 80 (33.2 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKL-YNKEETL 549
+ A+HE+GHALV + D + K TIV R ALG P + Y +++ +
Sbjct: 550 RRNTAYHEAGHALVAAMTEAADPIHKATIVQRGQ-ALGMVSQLPEMDHVQYTRKQMM 605
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 219 (82.2 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 43/88 (48%), Positives = 58/88 (65%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E VD+L+ P+ Y+ G K+PKG L++GPPG GKTL+AKAVA EA VPF +GS F+E+
Sbjct: 166 ELVDFLQNPKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEIY 225
Query: 62 GGLGAARVRTEVVFLHCRVFLHEITIFD 89
G+GA RVR +F ++ I D
Sbjct: 226 VGMGAKRVRE--LFSKAKMMAPSIVFID 251
Score = 48 (22.0 bits), Expect = 5.8e-15, Sum P(2) = 5.8e-15
Identities = 21/84 (25%), Positives = 32/84 (38%)
Query: 528 LALGFAQYTPSEQKLYNKEETLDPKKEMTVNREQPPSHDKKKRKCLTEISVTTMVLSSLN 587
L +GF + T E + E + K E+ +NR + + K + S T L
Sbjct: 419 LDIGFEKITLIEDRFKEYEHNIRSKSEL-INRIKVYLAGSRAMKLIYNESYTNSQDDFLK 477
Query: 588 RREKEDRIGESQPFRERTLSHQDK 611
+E D + E LS Q K
Sbjct: 478 IKELLDYMLSFDMLEESNLSEQKK 501
Score = 43 (20.2 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 9/34 (26%), Positives = 22/34 (64%)
Query: 149 AEELKKQEQCLR--KEKVLKIDAELRHKKELDLE 180
+E+ K+ ++ L K+K+LK+ L K++++ +
Sbjct: 497 SEQKKEMDEFLNSMKDKILKLSELLLEKEKIEYD 530
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 224 (83.9 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 41/69 (59%), Positives = 52/69 (75%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V YLK P+ + +G K P G LL GPPGCGKTL+AKA+A EA VPF M GSEF+E++
Sbjct: 444 ELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVPFYQMAGSEFVEVL 503
Query: 62 GGLGAARVR 70
G+G+AR+R
Sbjct: 504 VGVGSARIR 512
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 202 (76.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 43/88 (48%), Positives = 55/88 (62%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V LK E +QN G PKG LL GPPG GKTLLAKA+A EA +PF + NG++F+EM
Sbjct: 330 EIVRILKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMF 389
Query: 62 GGLGAARVRTEVVFLHCRVFLHEITIFD 89
G+ A+RV+ +F R + I D
Sbjct: 390 VGVAASRVKD--LFASSRSYAPSIIFID 415
Score = 50 (22.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 179 LERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKK 217
+E QI+ + KL E+ ++++ +K E ++ E KK
Sbjct: 807 METQIISDDTWKLVDEIWDKKVEEIKAEAVIQIEEEKKK 845
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 204 (76.9 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
+E V L+ Y+ LGA++P+G LL+GPPG GKTLLA+AVA EA VPF S++ SEF+E+
Sbjct: 347 VEIVSCLQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEL 406
Query: 61 IGGLGAARVR 70
G GAAR+R
Sbjct: 407 FVGRGAARIR 416
Score = 41 (19.5 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 565 HDKKKR-KCL-TEISVTTMVLSSLNRREKEDRIGESQPFRERTLS 607
+DK+ R + L E+S + SL RR D+ G P +TLS
Sbjct: 578 NDKEARPRTLGNELSKMFPWMPSLARRNGPDQDGLQGPLGYQTLS 622
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 189 (71.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 38/69 (55%), Positives = 48/69 (69%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E V + E Y+ G K+P G LL GPPG GKTLLAKAVA EA V F S++ S+F+E+
Sbjct: 424 EIVKFFTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISASQFVEIY 483
Query: 62 GGLGAARVR 70
G+GA+RVR
Sbjct: 484 VGVGASRVR 492
Score = 54 (24.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQ 397
RQVA +E+ A+V P + +TI PR LG+ +
Sbjct: 666 RQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGRELGYVR 705
Score = 54 (24.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQ 483
RQVA +E+ A+V P + +TI PR LG+ +
Sbjct: 666 RQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGRELGYVR 705
Score = 48 (22.0 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 488 EQKLYNKEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQ 534
++ L +VA +E+ A+V P + +TI PR LG+ +
Sbjct: 659 DRSLETWRQVAINEAAMAVVAVNFPDMKNIEFLTINPRAGRELGYVR 705
Score = 41 (19.5 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 170 ELRHKKELDLERQILLHEITKLKS 193
ELR K L+LE +L ++T ++
Sbjct: 851 ELRKIKRLELEEMVLKLDMTTARN 874
Score = 40 (19.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 85 ITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKEVMLRKKLEEEYS--IELGRKLQ 142
I D+E I N+ K IL ++ ++ +EK V + ++E+ +EL +
Sbjct: 785 INDIDVEALRILNMCYERAKEILGRNRTLMDEV-VEKLVQKKSLTKQEFFTLVELYGSSK 843
Query: 143 DMEIKHAEELKKQEQCLRKEKVLKID 168
M EL+K ++ +E VLK+D
Sbjct: 844 PMP-PSILELRKIKRLELEEMVLKLD 868
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 189 (71.6 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 42/89 (47%), Positives = 50/89 (56%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
M V +KRPE YQ++G P G LL GPPGCGKTLLAKAVA E+ F+S+ G E +
Sbjct: 506 MAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNK 565
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G VR VFL R + FD
Sbjct: 566 YVGESERAVRQ--VFLRARASSPCVIFFD 592
Score = 174 (66.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 42/119 (35%), Positives = 66/119 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE YQ G P+G LL GPPGCGKT+LA A+A E VPF+S++ + + G
Sbjct: 194 IKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESE 253
Query: 67 ARVRT---EVVFLH-CRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEK 121
+VR E L C +F+ EI + + + ++E +I+ + F+ + +L+ EK
Sbjct: 254 KKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQR--EMERRIV-AQFLTCMDELSFEK 309
>TIGR_CMR|CPS_1795 [details] [associations]
symbol:CPS_1795 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 HOGENOM:HOG000133952 ProtClustDB:CLSK741075
RefSeq:YP_268526.1 ProteinModelPortal:Q484I9 STRING:Q484I9
GeneID:3521104 KEGG:cps:CPS_1795 PATRIC:21466745
BioCyc:CPSY167879:GI48-1865-MONOMER Uniprot:Q484I9
Length = 1301
Score = 159 (61.0 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 33/89 (37%), Positives = 49/89 (55%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
++ ++++K P+ QN K+P G L GPPG GKT LAKAVA E +PF S++ SE
Sbjct: 881 LDVIEWMKFPDKLQNFDVKIPTGFLFAGPPGTGKTFLAKAVAGECGLPFFSVSASELSST 940
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
I +G + + +F R + I D
Sbjct: 941 I--IGGSSEKIMALFSVARKYAPSIVFID 967
Score = 82 (33.9 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 41/136 (30%), Positives = 63/136 (46%)
Query: 429 LSSLLTVNK-FASLVCRQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPS 487
L++L++ ++ +S QV E+ + VG P T +K TIV + G +PS
Sbjct: 1064 LTALVSSSQGMSSAEIDQV-LREAIYQAVGTEKPLTIEHIKQTIV---RVVYG----SPS 1115
Query: 488 EQKLYNKEE---VAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ-KLY 543
E KEE AFHE+ H L LL + TI PR +LGF SE+ + Y
Sbjct: 1116 ENIKLGKEEKRRTAFHEAAHLLTYKLLFPNQIIDFATIEPRNQ-SLGFVATRASEEYESY 1174
Query: 544 NKEETLDPKKEMTVNR 559
+K ++ + + R
Sbjct: 1175 SKTRVMNKLQVLLAGR 1190
Score = 79 (32.9 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ-KLYNKEEIFSPID 416
R+ AFHE+ H L LL + TI PR +LGF SE+ + Y+K + + +
Sbjct: 1126 RRTAFHEAAHLLTYKLLFPNQIIDFATIEPRNQ-SLGFVATRASEEYESYSKTRVMNKLQ 1184
Query: 417 TSRSHRVLRK 426
+ RV K
Sbjct: 1185 VLLAGRVAEK 1194
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 5/29 (17%), Positives = 19/29 (65%)
Query: 332 SRSHRVLRKWVLSSLLTVNKFASLVCRQV 360
+++ + +++W++++ +V K + C Q+
Sbjct: 1249 AKAQKAVQQWLITAEQSVEKLLNDNCHQL 1277
Score = 38 (18.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 5/29 (17%), Positives = 19/29 (65%)
Query: 418 SRSHRVLRKWVLSSLLTVNKFASLVCRQV 446
+++ + +++W++++ +V K + C Q+
Sbjct: 1249 AKAQKAVQQWLITAEQSVEKLLNDNCHQL 1277
>TIGR_CMR|CPS_1798 [details] [associations]
symbol:CPS_1798 "ATP-dependent peptidase, M41 family"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000642 InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR013093
Pfam:PF00004 Pfam:PF01434 Pfam:PF07724 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0006508
GO:GO:0004222 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
eggNOG:COG0542 RefSeq:YP_268529.1 ProteinModelPortal:Q484I6
STRING:Q484I6 GeneID:3520574 KEGG:cps:CPS_1798 PATRIC:21466749
HOGENOM:HOG000133952 ProtClustDB:CLSK741075
BioCyc:CPSY167879:GI48-1868-MONOMER Uniprot:Q484I6
Length = 1284
Score = 156 (60.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 32/56 (57%), Positives = 37/56 (66%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSE 56
+E V +LK PE N G K+P G L GPPG GKTLLAKAVA E +PF S+ SE
Sbjct: 864 IEVVSWLKAPEKLLNFGIKIPTGFLFSGPPGTGKTLLAKAVAGECELPFFSVAASE 919
Score = 80 (33.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 358 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ-KLYNKEEIFSPID 416
R+ A+HE+ H L LL + +TI PR ALGF SE+ + Y+K + +
Sbjct: 1109 RRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQ-ALGFVATRASEEYESYSKRRVMHKLQ 1167
Query: 417 TSRSHRVLRK 426
+ RV K
Sbjct: 1168 VLLAGRVAEK 1177
Score = 75 (31.5 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 24/66 (36%), Positives = 33/66 (50%)
Query: 444 RQVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ-KLYNKEEVAFHES 502
R+ A+HE+ H L LL + +TI PR ALGF SE+ + Y+K V H+
Sbjct: 1109 RRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQ-ALGFVATRASEEYESYSKRRV-MHKL 1166
Query: 503 GHALVG 508
L G
Sbjct: 1167 QVLLAG 1172
Score = 71 (30.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 494 KEEVAFHESGHALVGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQ-KLYNKEETLDPK 552
K A+HE+ H L LL + +TI PR ALGF SE+ + Y+K +
Sbjct: 1108 KRRTAYHEAAHLLAYKLLFPKQPIDFITIEPRNQ-ALGFVATRASEEYESYSKRRVMHKL 1166
Query: 553 KEMTVNR 559
+ + R
Sbjct: 1167 QVLLAGR 1173
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 181 (68.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 39/89 (43%), Positives = 49/89 (55%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
M V +KRPE Y+ +G P G LL GPPGCGKTLLAKAVA E+ F+S+ G E +
Sbjct: 547 MAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNK 606
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G +R VF R + + FD
Sbjct: 607 YVGESERSIRQ--VFTRARASVPCVIFFD 633
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 34/90 (37%), Positives = 49/90 (54%)
Query: 1 MEFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIE 59
ME + + PE + + G + P+G LL GPPGCGKT +A A+A E VPF+S++ +
Sbjct: 218 MELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVS 277
Query: 60 MIGGLGAARVRT---EVVFLH-CRVFLHEI 85
+ G ++R E L C VF EI
Sbjct: 278 GMSGESEKKIRDLFDEARSLAPCLVFFDEI 307
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 155 (59.6 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 58 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 117
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 118 RMVRELFEMARTKKACLIFFDEI 140
Score = 59 (25.8 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 221 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 278
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 279 ----VIKSYAK--FSATPRYMTYN 296
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 176 (67.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE ++ +G + PKG LL GPPG GKTLLAKAVATE N F+ + GSE ++ G GA
Sbjct: 190 LKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGA 249
Query: 67 ARVR 70
+ V+
Sbjct: 250 SLVK 253
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 176 (67.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 67/209 (32%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 203 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 262
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 263 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 316
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 317 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 375
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L E+ K +L ++ + E L A
Sbjct: 376 VTLDELIMAKDDLSGADIKAICTEAGLMA 404
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 176 (67.0 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 67/209 (32%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 204 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 263
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 264 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 317
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 318 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 376
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L E+ K +L ++ + E L A
Sbjct: 377 VTLDELIMAKDDLSGADIKAICTEAGLMA 405
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 173 (66.0 bits), Expect = 5.5e-10, P = 5.5e-10
Identities = 66/209 (31%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 132 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 191
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 192 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 245
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 246 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 304
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L ++ K +L ++ + E L A
Sbjct: 305 VTLDDLIMAKDDLSGADIKAICTEAGLMA 333
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 178 (67.7 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 39/86 (45%), Positives = 49/86 (56%)
Query: 4 VDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGG 63
VD +K PE Y ++G P G LL GPPGCGKTLLAKAVA E+ F+S+ G E + G
Sbjct: 486 VDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISVKGPELLNKYVG 545
Query: 64 LGAARVRTEVVFLHCRVFLHEITIFD 89
VR VF+ R + + FD
Sbjct: 546 ESERAVRQ--VFVRARSSIPCVIFFD 569
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 41/119 (34%), Positives = 59/119 (49%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ RP+ Y + P+G LL GPPGCGKT++A A A E VPF+S++ + + G
Sbjct: 185 MTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAAELGVPFISISAPSIVSGMSGESE 244
Query: 67 ARVRT---EVVFLH-CRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEK 121
+R E L C +F+ EI D T EN K I++ + + L LEK
Sbjct: 245 KALREHFEEAKRLAPCLIFIDEI---DAITPKRENSQREMEKRIVAQLLTCMDDLALEK 300
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 179 (68.1 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 44/122 (36%), Positives = 66/122 (54%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E ++Y + PE Y +LG + P+G LL GP GCGKTLLAKA+A E VP +++ +E
Sbjct: 230 EHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSG 289
Query: 61 IGGLGAARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLK 116
+ G ARVRT + C +F+ EI + + D+E +I+ S + +
Sbjct: 290 VSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASK--DMERRIV-SQLLTCMDS 346
Query: 117 LN 118
LN
Sbjct: 347 LN 348
Score = 155 (59.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ P+ Y+N+G P G L+ GPPGCGKTLLAKA+A+E F+S+ G E + G
Sbjct: 586 IRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESE 645
Query: 67 ARVR 70
VR
Sbjct: 646 RAVR 649
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 174 (66.3 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 67/209 (32%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLH--CRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 265 KLVRELFRVAEEHGPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 318
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 377
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L E+ K +L ++ + E L A
Sbjct: 378 VTLDELIMAKDDLSGADIKAICTEAGLMA 406
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 173 (66.0 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 66/209 (31%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 318
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 377
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L ++ K +L ++ + E L A
Sbjct: 378 VTLDDLIMAKDDLSGADIKAICTEAGLMA 406
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 173 (66.0 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 66/209 (31%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 318
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 377
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L ++ K +L ++ + E L A
Sbjct: 378 VTLDDLIMAKDDLSGADIKAICTEAGLMA 406
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 173 (66.0 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 66/209 (31%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 318
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 377
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L ++ K +L ++ + E L A
Sbjct: 378 VTLDDLIMAKDDLSGADIKAICTEAGLMA 406
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 173 (66.0 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 66/209 (31%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 318
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 377
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L ++ K +L ++ + E L A
Sbjct: 378 VTLDDLIMAKDDLSGADIKAICTEAGLMA 406
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 173 (66.0 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 66/209 (31%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 318
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 377
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L ++ K +L ++ + E L A
Sbjct: 378 VTLDDLIMAKDDLSGADIKAICTEAGLMA 406
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 173 (66.0 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 66/209 (31%), Positives = 95/209 (45%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKE 122
VR V H VF+ EI + TK ++ E +I + M+ L LN
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDA--IGTKRYDSNSGGEREIQRT---MLEL-LNQLDG 318
Query: 123 VMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLERQ 182
R ++ + L I+ +K E L EK K ++ H + L
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQI-HTSRMTLADD 377
Query: 183 ILLHEITKLKSELKNRELHIVKMETQLRA 211
+ L ++ K +L ++ + E L A
Sbjct: 378 VTLDDLIMAKDDLSGADIKAICTEAGLMA 406
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 172 (65.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 41/83 (49%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 204 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 263
Query: 67 ARVRT--EVVFLHCR--VFLHEI 85
VR V H VF+ EI
Sbjct: 264 KLVRELFRVAEEHAPSIVFIDEI 286
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 158 (60.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 38/83 (45%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 197 LLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 256
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 257 RMVRELFEMARTKKACLIFFDEI 279
Score = 58 (25.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H K++ +ER I + +L E+ V E + A + +K+A K ++++N+ +
Sbjct: 360 HAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVV 419
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 158 (60.7 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 38/83 (45%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 197 LLHPERYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 256
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 257 RMVRELFEMARTKKACLIFFDEI 279
Score = 58 (25.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H K++ +ER I + +L E+ V E + A + +K+A K ++++N+ +
Sbjct: 360 HAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVV 419
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 161 (61.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 161 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 220
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 221 RMVRE--LFVMAREHAPSIIFMD 241
>UNIPROTKB|J3QRR3 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000584880 Uniprot:J3QRR3
Length = 127
Score = 148 (57.2 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 30/62 (48%), Positives = 41/62 (66%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ +G
Sbjct: 24 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKF--IGE 81
Query: 67 AR 68
AR
Sbjct: 82 AR 83
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 155 (59.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 186 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 245
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 246 RMVRELFEMARTKKACLIFFDEI 268
Score = 59 (25.8 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 349 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 406
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 407 ----VIKSYAK--FSATPRYMTYN 424
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 194 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 253
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 254 RMVRELFEMARTKKACLIFFDEI 276
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 357 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 414
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 415 ----VIKSYAK--FSATPRYMTYN 432
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 155 (59.6 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 59 (25.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 155 (59.6 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 196 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 255
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 256 RMVRELFEMARTKKACLIFFDEI 278
Score = 59 (25.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 359 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 416
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 417 ----VIKSYAK--FSATPRYMTYN 434
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 41/83 (49%), Positives = 50/83 (60%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+++G K PKG +L GPPG GKTLLAKAVA E + FL + GSE I+ G G
Sbjct: 213 LTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGP 272
Query: 67 ARVRT--EVVFLHCR--VFLHEI 85
VR +V H VF+ EI
Sbjct: 273 KLVREMFKVAEEHAPSIVFIDEI 295
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 169 (64.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 41/83 (49%), Positives = 50/83 (60%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+++G K PKG +L GPPG GKTLLAKAVA E + FL + GSE I+ G G
Sbjct: 213 LTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGP 272
Query: 67 ARVRT--EVVFLHCR--VFLHEI 85
VR +V H VF+ EI
Sbjct: 273 KLVREMFKVAEEHAPSIVFIDEI 295
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 161 (61.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 120 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 179
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 180 RMVRE--LFVMAREHAPSIIFMD 200
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 155 (59.6 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 255 RMVRELFEMARTKKACLIFFDEI 277
Score = 58 (25.5 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 358 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 161 (61.7 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 161 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 220
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 221 RMVRE--LFVMAREHAPSIIFMD 241
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 156 (60.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 38/83 (45%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG PKGALL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 205 LLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGA 264
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 265 RMVRELFEMARTKKACIIFFDEI 287
Score = 57 (25.1 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H K + +ER I I++L EL V E + A + +K+A K + +V++ I
Sbjct: 368 HAKSMSVERDIRWELISRLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLAAVDKVI 427
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 155 (59.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 237 LLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 296
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 297 RMVRELFEMARTKKACLIFFDEI 319
Score = 59 (25.8 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 20/84 (23%), Positives = 39/84 (46%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++VN+
Sbjct: 400 HARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNK-- 457
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 458 ----VIKSYAK--FSATPRYMTYN 475
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 161 (61.7 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 150 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 209
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 210 RMVRE--LFVMAREHAPSIIFMD 230
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 171 (65.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 38/105 (36%), Positives = 58/105 (55%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE YQ+LG P+G LL GPPGCGKTLLA A+A E ++P L + E + + G
Sbjct: 282 HMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES 341
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C VF+ EI + ++ D+E +I+
Sbjct: 342 EQKLRDLFDQAVSNAPCIVFIDEIDAITPKREVASK--DMERRIV 384
Score = 164 (62.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 39/97 (40%), Positives = 51/97 (52%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ PE ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 600 VRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 659
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF + + FD + D ET
Sbjct: 660 RAVRQ--VFQRAKNSAPCVIFFDEVDALCPRRSDRET 694
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 171 (65.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 38/105 (36%), Positives = 58/105 (55%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE YQ+LG P+G LL GPPGCGKTLLA A+A E ++P L + E + + G
Sbjct: 282 HMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES 341
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C VF+ EI + ++ D+E +I+
Sbjct: 342 EQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASK--DMERRIV 384
Score = 162 (62.1 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 38/97 (39%), Positives = 51/97 (52%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ P+ ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 600 VRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 659
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF + + FD + D ET
Sbjct: 660 RAVRQ--VFQRAKNSAPCVIFFDEVDALCPRRSDRET 694
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 167 (63.8 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K E ++ LG K PKGAL+ GPPG GKTLLA+A A E N FL + G + ++M G GA
Sbjct: 231 MKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGA 290
Query: 67 ARVR 70
VR
Sbjct: 291 KLVR 294
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 169 (64.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 58/186 (31%), Positives = 87/186 (46%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE ++ G KG L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 495 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 554
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD----LETKIIENIFDL--ETKIILSSFMMIV 114
G A VR +F R + FD + T+ ++ D +L+ + +
Sbjct: 555 WFGESEANVRE--IFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEM 612
Query: 115 LKLNLEKEVML-----RKKLEEEYSIELGRKLQDMEIKHAEELKKQE---QCLRKEKVLK 166
+N +K V + R + + + GR Q + I +E + + CLRK V K
Sbjct: 613 DGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAK 672
Query: 167 IDAELR 172
D +LR
Sbjct: 673 -DVDLR 677
Score = 158 (60.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 54/191 (28%), Positives = 97/191 (50%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++++G K PKG LL GPPG GKTL+A+AVA E F +NG E +
Sbjct: 222 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 281
Query: 61 IGGLGAARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLK 116
+ G + +R E + +F+ EI + K + ++E +I+ S + ++
Sbjct: 282 LAGESESNLRKAFEEAEKNAPSIIFIDEID--SIAPKREKTHGEVERRIV-SQLLTLMDG 338
Query: 117 LNLEKEVMLRKKLEEEYSIE-----LGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAE- 170
L V++ SI+ GR ++++I +E+ + E VL+I +
Sbjct: 339 LKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE-------VLRIHTKN 391
Query: 171 LRHKKELDLER 181
++ +++DLER
Sbjct: 392 MKLAEDVDLER 402
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 164 (62.8 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 40/83 (48%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L G PG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEI 85
VR V H VF+ EI
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEI 287
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 163 (62.4 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 39/94 (41%), Positives = 49/94 (52%)
Query: 10 PEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARV 69
PE Y+ +G + P G L+ GPPG GKT+L KAVA E V F+ + GSEF++ G G V
Sbjct: 161 PELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMV 220
Query: 70 RTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
R VF R I D I FD +T
Sbjct: 221 RD--VFRLARENSPSIIFIDEVDAIATKRFDAQT 252
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 163 (62.4 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 39/94 (41%), Positives = 49/94 (52%)
Query: 10 PEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARV 69
PE Y+ +G + P G L+ GPPG GKT+L KAVA E V F+ + GSEF++ G G V
Sbjct: 161 PELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMV 220
Query: 70 RTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
R VF R I D I FD +T
Sbjct: 221 RD--VFRLARENSPSIIFIDEVDAIATKRFDAQT 252
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 168 (64.2 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 39/89 (43%), Positives = 47/89 (52%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
M V +K+PE Y +G P G L+ GPPGCGKTLLAKAVA E+ F+S+ G E +
Sbjct: 536 MCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK 595
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G VR VF R I FD
Sbjct: 596 YVGESEKAVRQ--VFQRARASTPCIIFFD 622
Score = 149 (57.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 10 PEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARV 69
PE Y + G + P+G LL GPPGCGKT +A A+A E VPF++++ + + G ++
Sbjct: 216 PEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKL 275
Query: 70 RTEVV-----FLHCRVFLHEITIFDLETKIIENIFDLET-KIILSSFMMIVLKLNLEK 121
R E+ C +F+ EI D T + E K I++ + ++ +L LEK
Sbjct: 276 R-EIFEEAKQIAPCLIFMDEI---DAITPKRDGGAQREMEKRIVAQLLTLMDELTLEK 329
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 168 (64.2 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 39/89 (43%), Positives = 47/89 (52%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
M V +K+PE Y +G P G L+ GPPGCGKTLLAKAVA E+ F+S+ G E +
Sbjct: 536 MCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNK 595
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G VR VF R I FD
Sbjct: 596 YVGESEKAVRQ--VFQRARASTPCIIFFD 622
Score = 149 (57.5 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 39/118 (33%), Positives = 62/118 (52%)
Query: 10 PEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARV 69
PE Y + G + P+G LL GPPGCGKT +A A+A E VPF++++ + + G ++
Sbjct: 216 PEIYSSTGVEPPRGVLLYGPPGCGKTTIANALAGELKVPFINISAPSVVSGMSGESEKKL 275
Query: 70 RTEVV-----FLHCRVFLHEITIFDLETKIIENIFDLET-KIILSSFMMIVLKLNLEK 121
R E+ C +F+ EI D T + E K I++ + ++ +L LEK
Sbjct: 276 R-EIFEEAKQIAPCLIFMDEI---DAITPKRDGGAQREMEKRIVAQLLTLMDELTLEK 329
>UNIPROTKB|G3V4X1 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AL161662
HGNC:HGNC:9547 EMBL:AL355074 ProteinModelPortal:G3V4X1 SMR:G3V4X1
Ensembl:ENST00000553835 ArrayExpress:G3V4X1 Bgee:G3V4X1
Uniprot:G3V4X1
Length = 84
Score = 142 (55.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 26/43 (60%), Positives = 31/43 (72%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPF 49
L PEYY+ +G K PKG +L GPPG GKTLLAKAVA + + F
Sbjct: 42 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATF 84
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 142 (55.0 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFI 58
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE +
Sbjct: 92 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 143
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 168 (64.2 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ PE ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 595 VRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 654
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF R + FD + D ET
Sbjct: 655 RAVRQ--VFQRARSSAPCVIFFDEVDALCPRRSDRET 689
Score = 168 (64.2 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE Y +LGA P+G LL GPPGCGKTLLA A+A E ++P L + +E + + G
Sbjct: 277 HMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGES 336
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C +F+ EI + ++ D+E +I+
Sbjct: 337 EQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASK--DMERRIV 379
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 168 (64.2 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 40/97 (41%), Positives = 51/97 (52%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ PE ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 600 VRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 659
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF R + FD + D ET
Sbjct: 660 RAVRQ--VFQRARSSAPCVIFFDEVDALCPRRSDRET 694
Score = 168 (64.2 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 37/105 (35%), Positives = 59/105 (56%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE Y +LGA P+G LL GPPGCGKTLLA A+A E ++P L + +E + + G
Sbjct: 277 HMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVSGVSGES 336
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C +F+ EI + ++ D+E +I+
Sbjct: 337 EQKLRELFEQAVSNAPCVLFIDEIDAITPKREVASK--DMERRIV 379
Score = 39 (18.8 bits), Expect = 8.6e-08, Sum P(2) = 8.6e-08
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 591 KEDRIGESQPFRER-TLSHQDKIR 613
+EDR+G ++P E LS QD+++
Sbjct: 506 QEDRVG-TEPASETPVLSVQDELQ 528
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 164 (62.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE+++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 164 VKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 223
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 224 RMVRE--LFVMAREHAPSIIFMD 244
Score = 44 (20.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 16/83 (19%), Positives = 36/83 (43%)
Query: 166 KIDAELRHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLID 225
++D H ++++L R I L +I +L E+ V E + A + ++ +
Sbjct: 319 RLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFE 378
Query: 226 SVNREIAETILLKNFAHQLIVKC 248
++ + KN + + + KC
Sbjct: 379 MAVAKVMQKDSEKNMSIKKLWKC 401
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/83 (43%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE +++LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G G+
Sbjct: 152 LKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGSELVQKYIGEGS 211
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 212 RMVRE--LFVMAREHAPSIIFMD 232
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 165 (63.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE Y +LG P+G LL GPPGCGKTLLA A+A E ++P L + E + + G
Sbjct: 177 HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES 236
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C +F+ EI + ++ D+E +I+
Sbjct: 237 EQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASK--DMERRIV 279
Score = 159 (61.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 31/64 (48%), Positives = 41/64 (64%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ P+ ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 495 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 554
Query: 67 ARVR 70
VR
Sbjct: 555 RAVR 558
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 162 (62.1 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G G+
Sbjct: 165 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 224
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 225 RMVRE--LFIMAREHAPSIIFMD 245
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 163 (62.4 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 68/244 (27%), Positives = 106/244 (43%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+ +G K PKG +L G PG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 206 LTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGP 265
Query: 67 ARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLE-- 120
R ++ H VF+ EI + TK E+ E +I + ++ +
Sbjct: 266 RLCRQIFQIAADHAPSIVFIDEIDA--IGTKRYESTSGGEREIQRTMLELLNQLDGFDDR 323
Query: 121 ---KEVMLRKKLE--EEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKK 175
K +M K+E + I GR D +I L + K+K+L I H
Sbjct: 324 GDIKVIMATNKIESLDPALIRPGRI--DRKI-----LFENPDANTKKKILTI-----HTS 371
Query: 176 ELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSVNREIAETI 235
++ L + L EI K +L ++ + E L A + + + S + +
Sbjct: 372 KMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKAEDFKSAKERVLKNK 431
Query: 236 LLKN 239
+ +N
Sbjct: 432 VEEN 435
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE + LG P G LL GPPGCGKTLLAKA+A EA + F+S+ G E + M G
Sbjct: 682 VKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESE 741
Query: 67 ARVR 70
VR
Sbjct: 742 RAVR 745
Score = 162 (62.1 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 53/189 (28%), Positives = 92/189 (48%)
Query: 2 EFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMI 61
E + ++K PE+Y LG +G LL GPPGCGKT LA+A++ + +P + + +E I I
Sbjct: 265 EMLIHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGI 324
Query: 62 GGLGAARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIV-LK 116
G R+R + + C +F+ EI + D+E +I+ + LK
Sbjct: 325 SGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASK--DMERRIVSQLISSLDNLK 382
Query: 117 LN-LEKEVMLRKKLEEEYSIELG-RKLQ--DMEIK-HAEELKKQEQCLRKE-KVLKIDAE 170
N + V++ ++ G R++ D EI H K++ + LR + + L +D +
Sbjct: 383 ANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHIPSRKERREILRIQCEGLSVDPK 442
Query: 171 LRHKKELDL 179
L + K +L
Sbjct: 443 LNYDKIAEL 451
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 166 (63.5 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 31/70 (44%), Positives = 45/70 (64%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++N+G K PKG LL GPPGCGKT++A+AVA E F +NG E +
Sbjct: 216 ELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSK 275
Query: 61 IGGLGAARVR 70
+ G + +R
Sbjct: 276 LAGESESNLR 285
Score = 158 (60.7 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 33/70 (47%), Positives = 42/70 (60%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE ++ G + KG L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 489 ETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 548
Query: 61 IGGLGAARVR 70
G A VR
Sbjct: 549 WFGESEANVR 558
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 166 (63.5 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 37/105 (35%), Positives = 58/105 (55%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE Y +LG P+G LL GPPGCGKTLLA A+A E ++P L + +E + + G
Sbjct: 282 HMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGES 341
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C +F+ EI + +I D+E +I+
Sbjct: 342 EQKLRELFEQAVSSAPCILFIDEIDAITPKREIASK--DMERRIV 384
Score = 157 (60.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 33/70 (47%), Positives = 42/70 (60%)
Query: 1 MEFVDYLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
M + L P+ ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M
Sbjct: 594 MAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNM 653
Query: 61 IGGLGAARVR 70
G VR
Sbjct: 654 YVGESERAVR 663
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 228
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 229 RMVRE--LFVMAREHAPSIIFMD 249
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 228
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 229 RMVRE--LFVMAREHAPSIIFMD 249
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 228
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 229 RMVRE--LFVMAREHAPSIIFMD 249
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 228
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 229 RMVRE--LFVMAREHAPSIIFMD 249
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 228
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 229 RMVRE--LFVMAREHAPSIIFMD 249
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 228
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 229 RMVRE--LFVMAREHAPSIIFMD 249
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 161 (61.7 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 169 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 228
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 229 RMVRE--LFVMAREHAPSIIFMD 249
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE Y +LG P+G LL GPPGCGKTLLA A+A E ++P L + E + + G
Sbjct: 166 HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES 225
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C +F+ EI + ++ D+E +I+
Sbjct: 226 EQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASK--DMERRIV 268
Score = 161 (61.7 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 38/97 (39%), Positives = 51/97 (52%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ P+ ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 484 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 543
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF + + FD + D ET
Sbjct: 544 RAVRQ--VFQRAKNSAPCVIFFDEVDALCPRRSDRET 578
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 175 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 234
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 235 RMVRE--LFVMAREHAPSIIFMD 255
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 177 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 236
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 237 RMVRE--LFVMAREHAPSIIFMD 257
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 36/83 (43%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G GA
Sbjct: 177 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 236
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 237 RMVRE--LFVMAREHAPSIIFMD 257
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G G+
Sbjct: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 241 RMVRE--LFVMAREHAPSIIFMD 261
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G G+
Sbjct: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 241 RMVRE--LFVMAREHAPSIIFMD 261
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 165 (63.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE YQ LG P+G LL GPPGCGKTLLA+AVA E +P L ++ E + + G
Sbjct: 245 HMRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGES 304
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R + C +F+ EI + + D+E +I+
Sbjct: 305 EQKLRELFEQAISSAPCILFIDEIDAITPKRETASK--DMERRIV 347
Score = 157 (60.3 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ PE ++ LG P G LL GPPGCGKTLLAKAVA + + F+S+ G E + M G
Sbjct: 540 IQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGESE 599
Query: 67 ARVR 70
VR
Sbjct: 600 RAVR 603
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G G+
Sbjct: 199 VKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 258
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 259 RMVRE--LFVMAREHAPSIIFMD 279
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 161 (61.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G G+
Sbjct: 199 VKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 258
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 259 RMVRE--LFVMAREHAPSIIFMD 279
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 165 (63.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE Y +LG P+G LL GPPGCGKTLLA A+A E ++P L + E + + G
Sbjct: 283 HMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES 342
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V C +F+ EI + ++ D+E +I+
Sbjct: 343 EQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASK--DMERRIV 385
Score = 161 (61.7 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 38/97 (39%), Positives = 51/97 (52%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ P+ ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 601 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 660
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF + + FD + D ET
Sbjct: 661 RAVRQ--VFQRAKNSAPCVIFFDEVDALCPRRSDRET 695
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 154 (59.3 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 36/83 (43%), Positives = 45/83 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + NLG + PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 195 LLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGA 254
Query: 67 ARVRTEVVFLH----CRVFLHEI 85
VR C +F EI
Sbjct: 255 RMVRELFEMARSKKACLIFFDEI 277
Score = 51 (23.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H + + +ER I + +L E+ V E + A + +K+A K +++V +
Sbjct: 358 HARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVKK-- 415
Query: 232 AETILLKNFAHQLIVKCPLMMTYS 255
++K++A P MTY+
Sbjct: 416 ----VIKSYAK--FSATPRYMTYN 433
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 160 (61.4 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 31/64 (48%), Positives = 39/64 (60%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G PKG +L G PG GKTLLAKAVA + F+ GS+ ++ G GA
Sbjct: 203 LTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGA 262
Query: 67 ARVR 70
VR
Sbjct: 263 RLVR 266
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 159 (61.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++ G G+
Sbjct: 165 VKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGS 224
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 225 RMVRE--LFVMAREHAPSIIFMD 245
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 159 (61.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 36/83 (43%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE + LG PKG LL GPPG GKTLLA+AVA F+ ++GSE ++ G GA
Sbjct: 179 VKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGA 238
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 239 RMVRE--LFVMAREHAPSIIFMD 259
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 163 (62.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 36/91 (39%), Positives = 50/91 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE + +G + PKG LL GPPGC KT++AKA+A E+ + FL++ G E + G
Sbjct: 638 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 697
Query: 67 ARVRTEVVFLHCRVFLHEITIFD-LETKIIE 96
VR +F R I FD L+ +E
Sbjct: 698 RAVRE--IFRKARAVAPSIIFFDELDALAVE 726
Score = 149 (57.5 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 50/179 (27%), Positives = 91/179 (50%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK+PE +++ G P+G LL GPPG GKT++A+AVA E +NG E I G
Sbjct: 364 LKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETE 423
Query: 67 ARVR---TEVVFLHCRV-FLHEITIFDLETKIIENIFDLETKIILSSFMMI--VLKLNLE 120
AR+R E H + F+ E+ + + +N ++E +++ S ++ + E
Sbjct: 424 ARLRQIFAEATLRHPSIIFIDELDALCPKREGAQN--EVEKRVVASLLTLMDGIGSEGSE 481
Query: 121 KEVMLRKKLEEEYSIEL-----GRKLQDMEI--KHAEE-LKKQEQCLRKEKVLKIDAEL 171
+V++ ++++ GR +++EI +A++ L ++ LR+ L +AEL
Sbjct: 482 GQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAEL 540
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 36/91 (39%), Positives = 50/91 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE + +G + PKG LL GPPGC KT++AKA+A E+ + FL++ G E + G
Sbjct: 641 LKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 700
Query: 67 ARVRTEVVFLHCRVFLHEITIFD-LETKIIE 96
VR +F R I FD L+ +E
Sbjct: 701 RAVRE--IFRKARAVAPSIIFFDELDALAVE 729
Score = 150 (57.9 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 50/179 (27%), Positives = 91/179 (50%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK+PE +++ G P+G LL GPPG GKT++A+AVA E +NG E I G
Sbjct: 367 LKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETE 426
Query: 67 ARVR---TEVVFLHCRV-FLHEITIFDLETKIIENIFDLETKIILSSFMMI--VLKLNLE 120
AR+R E H + F+ E+ + + +N ++E +++ S ++ + E
Sbjct: 427 ARLRQIFAEATLRHPSIIFIDELDALCPKREGAQN--EVEKRVVASLLTLMDGIGSEGSE 484
Query: 121 KEVMLRKKLEEEYSIEL-----GRKLQDMEI--KHAEE-LKKQEQCLRKEKVLKIDAEL 171
+V++ ++++ GR +++EI +A++ L ++ LR+ L +AEL
Sbjct: 485 GQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAEL 543
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 163 (62.4 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 64/248 (25%), Positives = 114/248 (45%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++++G K PKG LL GPPG GKTL+A+AVA E F +NG E +
Sbjct: 221 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 280
Query: 61 IGGLGAARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLK 116
+ G + +R E + +F+ EI + K + ++E +I+ S + ++
Sbjct: 281 LAGESESNLRKAFEEAEKNAPSIIFIDEID--SIAPKREKTNGEVERRIV-SQLLTLMDG 337
Query: 117 LNLEKEVMLRKKLEEEYSIE-----LGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAEL 171
L V++ SI+ GR ++++I +E+ + E VL+I
Sbjct: 338 LKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE-------VLRI---- 386
Query: 172 RHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSVNREI 231
H K + L + L I+K +L + E L+ + + DS++ EI
Sbjct: 387 -HTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLE-DDSIDAEI 444
Query: 232 AETILLKN 239
++ + N
Sbjct: 445 LNSMAVSN 452
Score = 158 (60.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/70 (47%), Positives = 41/70 (58%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE ++ G KG L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 494 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 553
Query: 61 IGGLGAARVR 70
G A VR
Sbjct: 554 WFGESEANVR 563
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 161 (61.7 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 38/97 (39%), Positives = 51/97 (52%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ P+ ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 325 VRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 384
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF + + FD + D ET
Sbjct: 385 RAVRQ--VFQRAKNSAPCVIFFDEVDALCPRRSDRET 419
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 159 (61.0 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 33/64 (51%), Positives = 41/64 (64%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G + PKG +L G PG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 208 LTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGP 267
Query: 67 ARVR 70
VR
Sbjct: 268 KMVR 271
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 158 (60.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 64/236 (27%), Positives = 99/236 (41%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE +Q +G K PKG LL GPPG GKTLLA+AVA+ FL + S ++ G A
Sbjct: 157 LKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESA 216
Query: 67 ARVRTEVVFL--H--CRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLK---LNL 119
+R + H C +F+ EI D E + L + + L
Sbjct: 217 RLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGK 276
Query: 120 EKEVMLRKKLE--EEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKEL 177
K +M + + + + GR + +EI E+ + E +LKI H +
Sbjct: 277 TKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGRLE-------ILKI-----HSSTV 324
Query: 178 DLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSVNREIAE 233
+E I + K+ L +L V E L A + + + + R++AE
Sbjct: 325 QMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDDFNRAVRKVAE 380
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 158 (60.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 38/97 (39%), Positives = 48/97 (49%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L + + Y+ +G P+G LL GPPG GKT+L KAVA F+ +NGSEF+ G G
Sbjct: 192 LVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTKAAFIRVNGSEFVHKYLGEGP 251
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF R I D I FD +T
Sbjct: 252 RMVRD--VFRLARENAPSIIFIDEVDSIATKRFDAQT 286
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 164 (62.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 40/83 (48%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PEYY+ +G K PKG +L G PG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 67 ARVRT--EVVFLHCR--VFLHEI 85
VR V H VF+ EI
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEI 287
Score = 38 (18.4 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 272 KKQNF-LPQTSTASNVNQSHNIPQEIYDDILNLKLNLEKE 310
+K F LP T + Q H + DD+ L L K+
Sbjct: 349 RKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKD 388
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 150 (57.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 36/83 (43%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE + +G K PKG LL GPPG GKTLLA+AVA V FL + S ++ G A
Sbjct: 152 LKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESA 211
Query: 67 ARVRTEVVFL--H--CRVFLHEI 85
+R + H C +F+ EI
Sbjct: 212 RIIREMFGYAKEHEPCVIFMDEI 234
Score = 51 (23.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 102 ETKIILSSFMMIVLKLNLEKEVMLRKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRK 161
+TKII+++ L L + L +K+E E+GR ++ ++I H E++ KQ + +
Sbjct: 271 QTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGR-MEILKI-HLEKVSKQGE-IDY 327
Query: 162 EKVLKI 167
E ++K+
Sbjct: 328 EALVKL 333
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 158 (60.7 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 36/83 (43%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE + LG PKG LL GPPG GKTLLA+AVA F+ ++GSE ++ G GA
Sbjct: 195 VKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGA 254
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 255 RMVRE--LFVMAREHAPSIIFMD 275
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 162 (62.1 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 64/248 (25%), Positives = 114/248 (45%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++++G K PKG LL GPPG GKTL+A+AVA E F +NG E +
Sbjct: 221 ELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSK 280
Query: 61 IGGLGAARVRT--EVVFLHCR--VFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLK 116
+ G + +R E + +F+ EI + K + ++E +I+ S + ++
Sbjct: 281 LAGESESNLRKAFEEAEKNAPSIIFIDEID--SIAPKREKTNGEVERRIV-SQLLTLMDG 337
Query: 117 LNLEKEVMLRKKLEEEYSIE-----LGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAEL 171
L V++ SI+ GR ++++I +E+ + E VL+I
Sbjct: 338 LKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE-------VLRI---- 386
Query: 172 RHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLARKQLIDSVNREI 231
H K + L + L I+K +L + E L+ + + DS++ EI
Sbjct: 387 -HTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLE-DDSIDAEI 444
Query: 232 AETILLKN 239
++ + N
Sbjct: 445 LNSMAVTN 452
Score = 158 (60.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 33/70 (47%), Positives = 41/70 (58%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE ++ G KG L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 494 ETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTM 553
Query: 61 IGGLGAARVR 70
G A VR
Sbjct: 554 WFGESEANVR 563
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG +L GPPG GKTLLA+AVA F+ ++GSE ++ G G+
Sbjct: 164 VKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTECKFIRVSGSELVQKYIGEGS 223
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 224 RMVRE--LFVMAREHAPSIIFMD 244
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 152 (58.6 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 36/89 (40%), Positives = 49/89 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE +Q +G PKG LL GPPG GKTLLA+AVA++ + FL + S ++ G A
Sbjct: 153 LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESA 212
Query: 67 ARVRTEVVFL--H--CRVFLHEITIFDLE 91
+R + H C +F+ EI D E
Sbjct: 213 RLIREMFNYARDHQPCIIFMDEIDAIDYE 241
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 150 (57.9 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G + ++M G GA
Sbjct: 150 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 209
Query: 67 ARVR 70
VR
Sbjct: 210 KLVR 213
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 157 (60.3 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E ++ LG + PKG LL GPPG GKTL+A+A A + N FL + G + ++M G GA VR
Sbjct: 194 EQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 253
Query: 71 TEVVFLH----CRVFLHEI 85
+ C +F+ EI
Sbjct: 254 DAFLLAKEKSPCIIFIDEI 272
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE Y G + +G L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 497 ELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 556
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G A VR VF R + FD
Sbjct: 557 WFGESEANVRD--VFDKARAAAPCVLFFD 583
Score = 143 (55.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++ +G K P+G LL GPPG GKTL+A+AVA E F +NG E +
Sbjct: 224 EMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSK 283
Query: 61 IGGLGAARVR 70
+ G + +R
Sbjct: 284 MSGESESNLR 293
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE Y G + +G L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 497 ELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 556
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G A VR VF R + FD
Sbjct: 557 WFGESEANVRD--VFDKARAAAPCVLFFD 583
Score = 143 (55.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++ +G K P+G LL GPPG GKTL+A+AVA E F +NG E +
Sbjct: 224 EMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSK 283
Query: 61 IGGLGAARVR 70
+ G + +R
Sbjct: 284 MSGESESNLR 293
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE Y G + +G L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 496 ELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 555
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G A VR VF R + FD
Sbjct: 556 WFGESEANVRD--VFDKARAAAPCVLFFD 582
Score = 149 (57.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++ +G K P+G LL GPPG GKTL+A+AVA E F +NG E +
Sbjct: 223 EMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 282
Query: 61 IGGLGAARVRTEVVFLHC 78
+ G + +R F C
Sbjct: 283 MSGESESNLRK--AFAEC 298
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 161 (61.7 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 38/89 (42%), Positives = 47/89 (52%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ PE Y G + +G L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 496 ELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 555
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G A VR VF R + FD
Sbjct: 556 WFGESEANVRD--VFDKARAAAPCVLFFD 582
Score = 149 (57.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V+ L+ P+ ++ +G K P+G LL GPPG GKTL+A+AVA E F +NG E +
Sbjct: 223 EMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 282
Query: 61 IGGLGAARVRTEVVFLHC 78
+ G + +R F C
Sbjct: 283 MSGESESNLRK--AFAEC 298
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 161 (61.7 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 36/91 (39%), Positives = 50/91 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK P+ + +G + PKG LL GPPGC KT++AKA+A E+ + FL++ G E + G
Sbjct: 647 LKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 67 ARVRTEVVFLHCRVFLHEITIFD-LETKIIE 96
VR VF R I FD L+ +E
Sbjct: 707 RAVRE--VFRKARAVAPSIIFFDELDALAVE 735
Score = 144 (55.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK+PE +++ G P+G LL GPPG GKT++A+AVA E +NG E I G
Sbjct: 373 LKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETE 432
Query: 67 ARVR---TEVVFLHCRV-FLHEI 85
AR+R E H + F+ E+
Sbjct: 433 ARLRQIFAEATLRHPSIIFIDEL 455
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 153 (58.9 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 1 MEFVDYLKRP----EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSE 56
ME V+ + P E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G +
Sbjct: 140 MELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQ 199
Query: 57 FIEMIGGLGAARVR 70
++M G GA VR
Sbjct: 200 LVQMFIGDGAKLVR 213
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 161 (61.7 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 37/91 (40%), Positives = 50/91 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE + +G + PKG LL GPPGC KT++AKA+A E+ + FL++ G E + G
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 67 ARVRTEVVFLHCRVFLHEITIFD-LETKIIE 96
VR +F R I FD L+ IE
Sbjct: 707 RAVRE--IFRKARAVSPSIIFFDELDALAIE 735
Score = 146 (56.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK+PE +++ G P+G LL GPPG GKT++A+AVA E +NG E I G
Sbjct: 373 LKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETE 432
Query: 67 ARVR---TEVVFLHCRV-FLHEITIFDLETKIIENIFDLETKIILS 108
AR+R E H + F+ E+ + + +N ++E +++ S
Sbjct: 433 ARLRQIFAEATLRHPSIIFIDELDALCPKREGAQN--EVEKRVVAS 476
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 166 (63.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
++ PE ++ LG P G LL GPPGCGKTLLAKAVA E+ + F+S+ G E + M G
Sbjct: 601 VRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE 660
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR VF R + FD
Sbjct: 661 RAVRQ--VFQRARNSAPCVIFFD 681
Score = 164 (62.8 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 36/105 (34%), Positives = 59/105 (56%)
Query: 6 YLKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLG 65
+++ PE Y +LG P+G LL GPPGCGKTLLA+A+A E +P L + +E + + G
Sbjct: 278 HVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGES 337
Query: 66 AARVRT----EVVFLHCRVFLHEITIFDLETKIIENIFDLETKII 106
++R V+ C +F+ EI + ++ D+E +I+
Sbjct: 338 EQKLRELFDQAVLNAPCVLFIDEIDAITPKREVASK--DMERRIV 380
Score = 43 (20.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 159 LRKEKVLKIDAELRHKKELDLERQILLHEITKLKSELKNRE 199
LR+E L + K E+ + R+ K+KS + ++
Sbjct: 805 LRQEMALPTTKSKKEKGEIKISRKHFEEAFRKVKSSVSKKD 845
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 156 (60.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+KR + ++++G + PKGAL+ GPPG GKTLLA+A A + N FL + + ++M G GA
Sbjct: 201 MKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGA 260
Query: 67 ARVR 70
VR
Sbjct: 261 KLVR 264
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 160 (61.4 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 39/97 (40%), Positives = 49/97 (50%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L E YQ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G
Sbjct: 181 LTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGP 240
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF + I D I FD +T
Sbjct: 241 RMVRD--VFRLAKENSPSIIFIDEIDAIATKRFDAQT 275
Score = 39 (18.8 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 15/58 (25%), Positives = 32/58 (55%)
Query: 531 GFAQYTPSEQKLY-NKEETLDPK--KEMTVNRE-QPPSHDKKKRKCLTEISVTTMVLS 584
GF Q T + + N+++TLDP + ++R+ + P D+++++ + + M LS
Sbjct: 294 GFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLS 351
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 150 (57.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G + ++M G GA
Sbjct: 171 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 230
Query: 67 ARVR 70
VR
Sbjct: 231 KLVR 234
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE + LG PKG LL GPPG GKTLLA+AVA F+ ++GSE ++ G G+
Sbjct: 168 VKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGS 227
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 228 RMVRE--LFVMAREHAPSIIFMD 248
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 155 (59.6 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 33/83 (39%), Positives = 49/83 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE +++LG PKG +L GPPG GKTLLA+AVA + F+ ++G+E ++ G G+
Sbjct: 168 VKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGS 227
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 228 RMVRE--LFVMAREHAPSIIFMD 248
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 160 (61.4 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 35/91 (38%), Positives = 50/91 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK P+ + +G + PKG LL GPPGC KT++AKA+A E+ + FL++ G E + G
Sbjct: 647 LKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 67 ARVRTEVVFLHCRVFLHEITIFD-LETKIIE 96
VR +F R I FD L+ +E
Sbjct: 707 RAVRE--IFRKARAVAPSIIFFDELDALAVE 735
Score = 144 (55.7 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 33/83 (39%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK+PE +++ G P+G LL GPPG GKT++A+AVA E +NG E I G
Sbjct: 373 LKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETE 432
Query: 67 ARVR---TEVVFLHCRV-FLHEI 85
AR+R E H + F+ E+
Sbjct: 433 ARLRQIFAEATLRHPSIIFIDEL 455
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 155 (59.6 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 184 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVR 243
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 244 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 274
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 140 (54.3 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 33/82 (40%), Positives = 46/82 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE +Q +G PKG LL GPPG GKTLLA+AVA++ + FL + S ++ G A
Sbjct: 114 LTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESA 173
Query: 67 ARVRTEVVFL--H--CRVFLHE 84
+R + H C +F+ E
Sbjct: 174 RLIREMFNYARDHQPCIIFMDE 195
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 155 (59.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 188 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 247
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 248 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 278
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 249 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 249 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 249 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 249 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 249 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 249 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 155 (59.6 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 37/93 (39%), Positives = 48/93 (51%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E Y+ +G P+G L+ GPPGCGKT+LAKAVA F+ + GSEF++ G G VR
Sbjct: 189 ELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVR 248
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF + I D I FD +T
Sbjct: 249 D--VFRLAKENAPAIIFIDEIDAIATKRFDAQT 279
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 155 (59.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 52/214 (24%), Positives = 95/214 (44%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E ++ LG + PKG LL GPPG GKTL+A+A A + N FL + G + ++M G GA VR
Sbjct: 195 ERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVR 254
Query: 71 TEVVFLH----CRVFLHEITIFDLETKIIENIFDLETKIILSSFMMIVLKLNLEKEVML- 125
C +F+ EI + E D E + + + + + ++ + +
Sbjct: 255 DAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVI 314
Query: 126 ----RKKLEEEYSIELGRKLQDMEIKHAEELKKQEQCLRKEKVLKIDAELRHKKELDLER 181
R + + + GR + +E H E E + ++L+I H +++++
Sbjct: 315 AATNRADILDPALMRSGRLDRKIEFPHPTE----EA---RARILQI-----HSRKMNVHP 362
Query: 182 QILLHEITKLKSELKNRELHIVKMETQLRAYESD 215
+ E+ + + +L V +E + A D
Sbjct: 363 DVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 396
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 160 (61.4 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 36/83 (43%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L + +Q LG K P+G L+ GPPGC KT++AKA+ATE+ + FLS+ G E M G
Sbjct: 555 LLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESE 614
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR VF R I FD
Sbjct: 615 RAVRE--VFRKARQVAPAIVFFD 635
Score = 47 (21.6 bits), Expect = 7.8e-08, Sum P(2) = 7.8e-08
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 157 QCLRKEKVLKIDAELRHKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYE 213
QC + ++LKI +LR + + + + ++ +L E+ V E LRA E
Sbjct: 709 QCEARREILKI--KLR---AMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALE 760
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 146 (56.5 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 36/83 (43%), Positives = 45/83 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + LG PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 229 LLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGA 288
Query: 67 ARVRT--EVVFLH--CRVFLHEI 85
VR E+ C +F EI
Sbjct: 289 RMVRELFEMARTKKACIIFFDEI 311
Score = 55 (24.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLA-RKQLIDSVNREI 231
H K + +ER I I++L EL V E + A + +K+A K + +V++ I
Sbjct: 392 HSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVI 451
Query: 232 A 232
+
Sbjct: 452 S 452
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 155 (59.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+ +G K PKG +L G PG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 204 LTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 263
Query: 67 ARVR 70
VR
Sbjct: 264 KLVR 267
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 155 (59.6 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+ +G K PKG +L G PG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 211 LTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 270
Query: 67 ARVR 70
VR
Sbjct: 271 RLVR 274
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 155 (59.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K+ + ++NLG K PKGAL+ GPPG GKTLLA+A A ++ FL + + ++M G GA
Sbjct: 220 MKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGA 279
Query: 67 ARVR 70
VR
Sbjct: 280 KLVR 283
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 159 (61.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 37/89 (41%), Positives = 51/89 (57%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E +++ LK P+ + +G K PKG LL GPPGC KTLLAKA+ATE+ + F+++ G E +
Sbjct: 636 EAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSK 695
Query: 61 IGGLGAARVRTEVVFLHCRVFLHEITIFD 89
G VR +F R I FD
Sbjct: 696 WVGESERAVRD--IFKKARQNSPSILFFD 722
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E +D + + ++ G K PKG LL GPPG GKTLLA+ VAT+ N ++NG++ ++
Sbjct: 326 ELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADILDK 385
Query: 61 IGGL 64
G+
Sbjct: 386 FYGM 389
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 154 (59.3 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 37/97 (38%), Positives = 49/97 (50%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L + Y+ +G P+G LL GPPGCGKT+LAKAVA F+ + GSEF++ G G
Sbjct: 172 LTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGP 231
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR +F + I D I FD +T
Sbjct: 232 RMVRD--LFRLAKQNSPSIIFIDEIDAIATKRFDAQT 266
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 154 (59.3 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 38/97 (39%), Positives = 48/97 (49%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L + + Y +G P+G LL GPPG GKT+L KAVA F+ +NGSEF++ G G
Sbjct: 175 LTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGP 234
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF R I D I FD +T
Sbjct: 235 RMVRD--VFRLARENSPAIIFIDEIDAIATKRFDAQT 269
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 154 (59.3 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 38/97 (39%), Positives = 48/97 (49%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L + + Y +G P+G LL GPPG GKT+L KAVA F+ +NGSEF++ G G
Sbjct: 175 LTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRINGSEFVQKYLGEGP 234
Query: 67 ARVRTEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VR VF R I D I FD +T
Sbjct: 235 RMVRD--VFRLARENSPAIIFIDEIDAIATKRFDAQT 269
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 154 (59.3 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 37/93 (39%), Positives = 47/93 (50%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
+ Y+ +G P+G LL GPPG GKT+L KAVA F+ +NGSEF++ G G VR
Sbjct: 190 DLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLGEGPRMVR 249
Query: 71 TEVVFLHCRVFLHEITIFDLETKIIENIFDLET 103
VF R I D I FD +T
Sbjct: 250 D--VFRMARENSPAIIFIDEIDAIATKRFDAQT 280
>UNIPROTKB|J3QLH6 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000581842 Uniprot:J3QLH6
Length = 215
Score = 144 (55.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIE 59
+K PE ++ LG PKG LL GPPG GKTLLA+AVA + F+ ++GSE ++
Sbjct: 161 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 213
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+++G K PKG +L G PG GKTLLAKAVA + FL + GSE I+ G G
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 67 ARVR 70
VR
Sbjct: 268 KLVR 271
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/64 (51%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+++G K PKG +L G PG GKTLLAKAVA + FL + GSE I+ G G
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 67 ARVR 70
VR
Sbjct: 268 KLVR 271
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 158 (60.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 36/91 (39%), Positives = 49/91 (53%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE + +G + PKG LL GPPGC KT++AKA+A E+ + FL++ G E + G
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 67 ARVRTEVVFLHCRVFLHEITIFD-LETKIIE 96
VR F R I FD L+ +E
Sbjct: 707 RAVRE--TFRKARAVAPSIIFFDELDALAVE 735
Score = 145 (56.1 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 35/106 (33%), Positives = 57/106 (53%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK+PE +++ G P+G LL GPPG GKT++A+AVA E +NG E I G
Sbjct: 373 LKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETE 432
Query: 67 ARVR---TEVVFLHCRV-FLHEITIFDLETKIIENIFDLETKIILS 108
A++R E H + F+ E+ + + +N ++E +++ S
Sbjct: 433 AKLRQIFAEATLRHPSIIFIDELDALCPKREGAQN--EVEKRVVAS 476
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 158 (60.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 39/83 (46%), Positives = 48/83 (57%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE Y+ +G K PKG +L G PG GKTLLAKAVA + + FL + GSE I+ G G
Sbjct: 224 LLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGP 283
Query: 67 ARVRT--EVVFLHCR--VFLHEI 85
VR +V H VF+ EI
Sbjct: 284 RLVRQIFQVAAEHAPSIVFIDEI 306
Score = 40 (19.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 544 NKEETLDPK--KEMTVNR----EQPPSHDKKK 569
NK ETLDP + ++R E P + KKK
Sbjct: 351 NKIETLDPALIRPGRIDRKILFENPDQNTKKK 382
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 155 (59.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+K PE + LG PKG LL GPPG GKTLLA+AVA F+ ++GSE ++ G G+
Sbjct: 163 VKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGS 222
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F+ R I D
Sbjct: 223 RMVRE--LFVMAREHAPSIIFMD 243
Score = 40 (19.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 299 DILNL---KLNLEKEVMLRKKLEE 319
DIL + K+NL + + LRK EE
Sbjct: 320 DILKIHSRKMNLTRGINLRKIAEE 343
Score = 37 (18.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 116 KLNLEKEVMLRKKLEE 131
K+NL + + LRK EE
Sbjct: 328 KMNLTRGINLRKIAEE 343
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 144 (55.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/64 (48%), Positives = 38/64 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L PE + LG PKG LL GPPG GKTL A+AVA + F+ + GSE ++ G GA
Sbjct: 206 LLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGA 265
Query: 67 ARVR 70
VR
Sbjct: 266 RMVR 269
Score = 53 (23.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 173 HKKELDLERQILLHEITKLKSELKNRELHIVKMETQLRAYESDKKLAR-KQLIDSVNREI 231
H K + +E+ I I++L EL V E + A + +K+A K + +V++ I
Sbjct: 369 HSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANEKDFLKAVDKVI 428
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 155 (59.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 34/83 (40%), Positives = 45/83 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
L+ + ++NLG PKG LL GPPGC KTL AKA+ATE+ + FL++ G E G
Sbjct: 519 LEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNKYVGESE 578
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
+R +F R I FD
Sbjct: 579 RAIRE--IFRKARAASPSIIFFD 599
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 150 (57.9 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G + ++M G GA
Sbjct: 152 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 211
Query: 67 ARVR 70
VR
Sbjct: 212 KLVR 215
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 35/83 (42%), Positives = 45/83 (54%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK PE +Q +G K PKG LL GPPG GKTLLAKAVA F+ S ++ G A
Sbjct: 201 LKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESA 260
Query: 67 ARVRTEVVFL--H--CRVFLHEI 85
+R + H C +F+ E+
Sbjct: 261 RIIREMFAYAKEHEPCIIFMDEV 283
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E ++ +G K PKG L+ GPPG GKTLLA+A A++ N FL + G + ++M G GA VR
Sbjct: 210 EKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVR 269
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 11 EYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGAARVR 70
E ++ +G K PKG L+ GPPG GKTLLA+A A++ N FL + G + ++M G GA VR
Sbjct: 210 EKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVR 269
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 154 (59.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LK P+ + +G + PKG LL GPPGC KT++AKA+A E+ + FL++ G E + G
Sbjct: 612 LKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESE 671
Query: 67 ARVRTEVVFLHCRVFLHEITIFD 89
VR +F R+ I FD
Sbjct: 672 RAVRE--IFRKARMVSPSILFFD 692
Score = 143 (55.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
LKR E +++ G P+G LL GPPG GKTL+AKA+A E +NG E I G
Sbjct: 338 LKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESE 397
Query: 67 ARVR 70
+R+R
Sbjct: 398 SRLR 401
Score = 43 (20.2 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 456 VGWLLPHTDALLKVTIVPRTSLALGFAQYTPSEQKLYNKEEVAFHESG 503
V W L H D+ +++ I P + L + P K + +A HESG
Sbjct: 608 VEWPLKHPDSFIRMGIQPPKGVLL-YGP--PGCSKTMIAKALA-HESG 651
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 370 VGWLLPHTDALLKVTIVPRTSLAL 393
V W L H D+ +++ I P + L
Sbjct: 608 VEWPLKHPDSFIRMGIQPPKGVLL 631
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 507 VGWLLPHTDALLKVTIVPRTSLAL 530
V W L H D+ +++ I P + L
Sbjct: 608 VEWPLKHPDSFIRMGIQPPKGVLL 631
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 150 (57.9 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G + ++M G GA
Sbjct: 156 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 215
Query: 67 ARVR 70
VR
Sbjct: 216 KLVR 219
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G + ++M G GA
Sbjct: 164 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 223
Query: 67 ARVR 70
VR
Sbjct: 224 KLVR 227
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G + ++M G GA
Sbjct: 171 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 230
Query: 67 ARVR 70
VR
Sbjct: 231 KLVR 234
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 150 (57.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 7 LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEMIGGLGA 66
+ E ++NLG + PKG L+ GPPG GKTLLA+A A + FL + G + ++M G GA
Sbjct: 190 MNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGA 249
Query: 67 ARVR 70
VR
Sbjct: 250 KLVR 253
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 32/70 (45%), Positives = 40/70 (57%)
Query: 2 EFVDY-LKRPEYYQNLGAKVPKGALLLGPPGCGKTLLAKAVATEANVPFLSMNGSEFIEM 60
E V Y ++ P+ + G KG L GPPGCGKTLLAKA+A E F+S+ G E + M
Sbjct: 223 ELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 282
Query: 61 IGGLGAARVR 70
G A VR
Sbjct: 283 WFGESEANVR 292
WARNING: HSPs involving 238 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.375 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 640 640 0.00093 120 3 11 22 0.40 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 488
No. of states in DFA: 602 (64 KB)
Total size of DFA: 297 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 72.71u 0.09s 72.80t Elapsed: 00:00:22
Total cpu time: 72.75u 0.09s 72.84t Elapsed: 00:00:22
Start: Thu Aug 15 11:35:38 2013 End: Thu Aug 15 11:36:00 2013
WARNINGS ISSUED: 2